Your job contains 1 sequence.
>008032
MTADTLTQQNGLFVPDGDLISKNPNSISVTTNKETERRRRRRKQKKNKKASQQATLTDSN
NDADNETEDEDSQSQVAEKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSEDIDKR
DESAQNAESKKKADSDTEDEEQDSQPKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEVW
DATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFE
VKLREMKPGILSHDLKEALGMPDGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF
GYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDLEEEEEEEEEEEE
EEQIEEEELEDGIQSVDTLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEERIAPG
TLLGTTHTYVVNTGTQDKAGAKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEARE
EEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008032
(580 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1MC31 - symbol:SF3B2 "Uncharacterized protein"... 1112 1.1e-112 1
UNIPROTKB|E9PPJ0 - symbol:SF3B2 "Splicing factor 3B subun... 1112 1.1e-112 1
UNIPROTKB|Q13435 - symbol:SF3B2 "Splicing factor 3B subun... 1112 1.1e-112 1
UNIPROTKB|F1RU38 - symbol:SF3B2 "Uncharacterized protein"... 1112 1.1e-112 1
UNIPROTKB|E2RL65 - symbol:SF3B2 "Uncharacterized protein"... 1112 1.1e-112 1
FB|FBgn0031493 - symbol:CG3605 species:7227 "Drosophila m... 1062 2.1e-107 1
ZFIN|ZDB-GENE-070928-1 - symbol:sf3b2 "splicing factor 3b... 1020 6.0e-103 1
WB|WBGene00021004 - symbol:W03F9.10 species:6239 "Caenorh... 947 3.3e-95 1
UNIPROTKB|O16997 - symbol:W03F9.10 "Protein W03F9.10" spe... 947 3.3e-95 1
POMBASE|SPAC22F8.10c - symbol:sap145 "U2 snRNP-associated... 842 3.4e-90 2
ASPGD|ASPL0000031751 - symbol:AN5098 species:162425 "Emer... 874 1.8e-87 1
DICTYBASE|DDB_G0284555 - symbol:sf3b2 "splicing factor 3B... 870 4.7e-87 1
UNIPROTKB|G4NAE3 - symbol:MGG_03182 "Splicing factor 3B s... 823 4.5e-84 2
UNIPROTKB|H0YEX5 - symbol:SF3B2 "Splicing factor 3B subun... 652 6.0e-64 1
CGD|CAL0000205 - symbol:orf19.7581 species:5476 "Candida ... 477 1.6e-47 2
UNIPROTKB|Q5ACR1 - symbol:CUS1 "Potential spliceosomal U2... 477 1.6e-47 2
SGD|S000004853 - symbol:CUS1 "Protein required for assemb... 405 3.6e-40 2
TAIR|locus:2200126 - symbol:AT1G11520 "AT1G11520" species... 418 3.7e-39 1
RGD|1307159 - symbol:Sf3b2 "splicing factor 3b, subunit 2... 194 1.4e-14 1
UNIPROTKB|E1BSG7 - symbol:WBP11 "Uncharacterized protein"... 116 4.3e-05 2
UNIPROTKB|Q95KQ6 - symbol:BCL9 "B-cell CLL/lymphoma 9 pro... 95 0.00068 1
>UNIPROTKB|F1MC31 [details] [associations]
symbol:SF3B2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR007180 Pfam:PF04037 SMART:SM00513 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00390000006734 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GO:GO:0005689 OMA:MKTKMRE
EMBL:DAAA02063577 IPI:IPI00905628 UniGene:Bt.1943
Ensembl:ENSBTAT00000003602 ArrayExpress:F1MC31 Uniprot:F1MC31
Length = 896
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 233/430 (54%), Positives = 293/430 (68%)
Query: 161 RMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIE 220
R +AELKQ+ +RPDVVE+ D TA DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIE
Sbjct: 460 RFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIE 519
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
K PF+LPDFI TGI+++R+A EKE+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+
Sbjct: 520 KPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKW 579
Query: 281 QTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDG-----APPPWLINMQR 335
QTKPKLT HGDLY+EGKEFE +L+E KPG LS +L+ +LGMP G PPPWLI MQR
Sbjct: 580 QTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQR 639
Query: 336 YGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQE-QPNY 394
YGPPPSYP+LKIPGLN+PIP SFGYH GGWGKPPVDE G+PLYGDVFG + E Q
Sbjct: 640 YGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKT 699
Query: 395 EEEPVDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD-G-IQSVDT-------LSSTPTG 445
EEE +D++ WG+L + G I D+ SS P G
Sbjct: 700 EEEEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAG 758
Query: 446 VETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ETP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K
Sbjct: 759 METPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGP 818
Query: 501 AKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN-- 558
A L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+
Sbjct: 819 APE---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAA 870
Query: 559 -EKKRKRKMQ 567
+K++KRK Q
Sbjct: 871 KQKQKKRKAQ 880
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 191/348 (54%), Positives = 232/348 (66%)
Query: 77 AEKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSE---DIDKRDESAQNAESKKK- 132
A V +EYV E+ ++ + F++IFE F D E + +K D+ +A KKK
Sbjct: 365 AADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKMENSAVPKKKG 424
Query: 133 -------AXXXXXXXXXXXXPXXXXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATAS 185
+ P R +AELKQ+ +RPDVVE+ D TA
Sbjct: 425 FEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQ 484
Query: 186 DPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEK 245
DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIEK PF+LPDFI TGI+++R+A EK
Sbjct: 485 DPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEK 544
Query: 246 EDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLRE 305
E+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+QTKPKLT HGDLY+EGKEFE +L+E
Sbjct: 545 EEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKE 604
Query: 306 MKPGILSHDLKEALGMPDG-----APPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 360
KPG LS +L+ +LGMP G PPPWLI MQRYGPPPSYP+LKIPGLN+PIP SF
Sbjct: 605 KKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSF 664
Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDL 408
GYH GGWGKPPVDE G+PLYGDVFG + E EE WG+L
Sbjct: 665 GYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGEL 712
>UNIPROTKB|E9PPJ0 [details] [associations]
symbol:SF3B2 "Splicing factor 3B subunit 2" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003034 InterPro:IPR007180 Pfam:PF02037
Pfam:PF04037 PROSITE:PS50800 SMART:SM00513 GO:GO:0005634
GO:GO:0003676 EMBL:AP006287 InterPro:IPR006568 Pfam:PF04046
SMART:SM00581 HGNC:HGNC:10769 IPI:IPI00978402
ProteinModelPortal:E9PPJ0 SMR:E9PPJ0 PRIDE:E9PPJ0
Ensembl:ENST00000528302 ArrayExpress:E9PPJ0 Bgee:E9PPJ0
Uniprot:E9PPJ0
Length = 878
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 233/430 (54%), Positives = 293/430 (68%)
Query: 161 RMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIE 220
R +AELKQ+ +RPDVVE+ D TA DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIE
Sbjct: 442 RFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIE 501
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
K PF+LPDFI TGI+++R+A EKE+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+
Sbjct: 502 KPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKW 561
Query: 281 QTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDG-----APPPWLINMQR 335
QTKPKLT HGDLY+EGKEFE +L+E KPG LS +L+ +LGMP G PPPWLI MQR
Sbjct: 562 QTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQR 621
Query: 336 YGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQE-QPNY 394
YGPPPSYP+LKIPGLN+PIP SFGYH GGWGKPPVDE G+PLYGDVFG + E Q
Sbjct: 622 YGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKT 681
Query: 395 EEEPVDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD-G-IQSVDT-------LSSTPTG 445
EEE +D++ WG+L + G I D+ SS P G
Sbjct: 682 EEEEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAG 740
Query: 446 VETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ETP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K
Sbjct: 741 METPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGP 800
Query: 501 AKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN-- 558
A L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+
Sbjct: 801 APE---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAA 852
Query: 559 -EKKRKRKMQ 567
+K++KRK Q
Sbjct: 853 KQKQKKRKAQ 862
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 191/348 (54%), Positives = 232/348 (66%)
Query: 77 AEKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSE---DIDKRDESAQNAESKKK- 132
A V +EYV E+ ++ + F++IFE F D E + +K D+ +A KKK
Sbjct: 347 AADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKG 406
Query: 133 -------AXXXXXXXXXXXXPXXXXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATAS 185
+ P R +AELKQ+ +RPDVVE+ D TA
Sbjct: 407 FEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQ 466
Query: 186 DPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEK 245
DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIEK PF+LPDFI TGI+++R+A EK
Sbjct: 467 DPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEK 526
Query: 246 EDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLRE 305
E+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+QTKPKLT HGDLY+EGKEFE +L+E
Sbjct: 527 EEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKE 586
Query: 306 MKPGILSHDLKEALGMPDG-----APPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 360
KPG LS +L+ +LGMP G PPPWLI MQRYGPPPSYP+LKIPGLN+PIP SF
Sbjct: 587 KKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSF 646
Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDL 408
GYH GGWGKPPVDE G+PLYGDVFG + E EE WG+L
Sbjct: 647 GYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGEL 694
>UNIPROTKB|Q13435 [details] [associations]
symbol:SF3B2 "Splicing factor 3B subunit 2" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005689 "U12-type
spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR003034
InterPro:IPR007180 Pfam:PF02037 Pfam:PF04037 PROSITE:PS50800
SMART:SM00513 GO:GO:0019048 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0003676 GO:GO:0000398 GO:GO:0071013 eggNOG:COG5182 KO:K12829
InterPro:IPR006568 Pfam:PF04046 SMART:SM00581 GO:GO:0005689
EMBL:AK290850 EMBL:AK300016 EMBL:BC000401 EMBL:BC007610
EMBL:BC014125 EMBL:BC053577 EMBL:U41371 IPI:IPI00221106
RefSeq:NP_006833.2 UniGene:Hs.406423 PDB:2DO5 PDBsum:2DO5
ProteinModelPortal:Q13435 SMR:Q13435 IntAct:Q13435
MINT:MINT-4915443 STRING:Q13435 PhosphoSite:Q13435 DMDM:296452908
PaxDb:Q13435 PRIDE:Q13435 DNASU:10992 Ensembl:ENST00000322535
GeneID:10992 KEGG:hsa:10992 UCSC:uc001ogy.1 CTD:10992
GeneCards:GC11P065827 H-InvDB:HIX0009823 HGNC:HGNC:10769
HPA:HPA045028 MIM:605591 neXtProt:NX_Q13435 PharmGKB:PA35687
HOVERGEN:HBG054023 InParanoid:Q13435 OMA:MKTKMRE OrthoDB:EOG4GB75Q
ChEMBL:CHEMBL1229011 EvolutionaryTrace:Q13435 GenomeRNAi:10992
NextBio:41771 PMAP-CutDB:Q13435 ArrayExpress:Q13435 Bgee:Q13435
CleanEx:HS_SF3B2 Genevestigator:Q13435 GermOnline:ENSG00000087365
Uniprot:Q13435
Length = 895
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 233/430 (54%), Positives = 293/430 (68%)
Query: 161 RMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIE 220
R +AELKQ+ +RPDVVE+ D TA DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIE
Sbjct: 459 RFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIE 518
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
K PF+LPDFI TGI+++R+A EKE+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+
Sbjct: 519 KPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKW 578
Query: 281 QTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDG-----APPPWLINMQR 335
QTKPKLT HGDLY+EGKEFE +L+E KPG LS +L+ +LGMP G PPPWLI MQR
Sbjct: 579 QTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQR 638
Query: 336 YGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQE-QPNY 394
YGPPPSYP+LKIPGLN+PIP SFGYH GGWGKPPVDE G+PLYGDVFG + E Q
Sbjct: 639 YGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKT 698
Query: 395 EEEPVDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD-G-IQSVDT-------LSSTPTG 445
EEE +D++ WG+L + G I D+ SS P G
Sbjct: 699 EEEEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAG 757
Query: 446 VETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ETP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K
Sbjct: 758 METPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGP 817
Query: 501 AKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN-- 558
A L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+
Sbjct: 818 APE---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAA 869
Query: 559 -EKKRKRKMQ 567
+K++KRK Q
Sbjct: 870 KQKQKKRKAQ 879
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 191/348 (54%), Positives = 232/348 (66%)
Query: 77 AEKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSE---DIDKRDESAQNAESKKK- 132
A V +EYV E+ ++ + F++IFE F D E + +K D+ +A KKK
Sbjct: 364 AADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKG 423
Query: 133 -------AXXXXXXXXXXXXPXXXXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATAS 185
+ P R +AELKQ+ +RPDVVE+ D TA
Sbjct: 424 FEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQ 483
Query: 186 DPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEK 245
DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIEK PF+LPDFI TGI+++R+A EK
Sbjct: 484 DPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEK 543
Query: 246 EDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLRE 305
E+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+QTKPKLT HGDLY+EGKEFE +L+E
Sbjct: 544 EEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKE 603
Query: 306 MKPGILSHDLKEALGMPDG-----APPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 360
KPG LS +L+ +LGMP G PPPWLI MQRYGPPPSYP+LKIPGLN+PIP SF
Sbjct: 604 KKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSF 663
Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDL 408
GYH GGWGKPPVDE G+PLYGDVFG + E EE WG+L
Sbjct: 664 GYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGEL 711
>UNIPROTKB|F1RU38 [details] [associations]
symbol:SF3B2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR007180 Pfam:PF04037 SMART:SM00513 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00390000006734 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GO:GO:0005689 OMA:MKTKMRE EMBL:CU694743
Ensembl:ENSSSCT00000014162 Uniprot:F1RU38
Length = 879
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 233/430 (54%), Positives = 293/430 (68%)
Query: 161 RMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIE 220
R +AELKQ+ +RPDVVE+ D TA DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIE
Sbjct: 443 RFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIE 502
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
K PF+LPDFI TGI+++R+A EKE+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+
Sbjct: 503 KPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKW 562
Query: 281 QTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDG-----APPPWLINMQR 335
QTKPKLT HGDLY+EGKEFE +L+E KPG LS +L+ +LGMP G PPPWLI MQR
Sbjct: 563 QTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQR 622
Query: 336 YGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQE-QPNY 394
YGPPPSYP+LKIPGLN+PIP SFGYH GGWGKPPVDE G+PLYGDVFG + E Q
Sbjct: 623 YGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKT 682
Query: 395 EEEPVDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD-G-IQSVDT-------LSSTPTG 445
EEE +D++ WG+L + G I D+ SS P G
Sbjct: 683 EEEEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAG 741
Query: 446 VETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ETP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K
Sbjct: 742 METPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGP 801
Query: 501 AKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN-- 558
A L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+
Sbjct: 802 APE---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAA 853
Query: 559 -EKKRKRKMQ 567
+K++KRK Q
Sbjct: 854 KQKQKKRKAQ 863
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 191/348 (54%), Positives = 232/348 (66%)
Query: 77 AEKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSE---DIDKRDESAQNAESKKK- 132
A V +EYV E+ ++ + F++IFE F D E + +K D+ +A KKK
Sbjct: 348 AADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAVPKKKG 407
Query: 133 -------AXXXXXXXXXXXXPXXXXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATAS 185
+ P R +AELKQ+ +RPDVVE+ D TA
Sbjct: 408 FEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQ 467
Query: 186 DPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEK 245
DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIEK PF+LPDFI TGI+++R+A EK
Sbjct: 468 DPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEK 527
Query: 246 EDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLRE 305
E+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+QTKPKLT HGDLY+EGKEFE +L+E
Sbjct: 528 EEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKE 587
Query: 306 MKPGILSHDLKEALGMPDG-----APPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 360
KPG LS +L+ +LGMP G PPPWLI MQRYGPPPSYP+LKIPGLN+PIP SF
Sbjct: 588 KKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSF 647
Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDL 408
GYH GGWGKPPVDE G+PLYGDVFG + E EE WG+L
Sbjct: 648 GYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGEL 695
>UNIPROTKB|E2RL65 [details] [associations]
symbol:SF3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003034 InterPro:IPR007180 Pfam:PF02037 Pfam:PF04037
PROSITE:PS50800 SMART:SM00513 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00390000006734 KO:K12829 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GO:GO:0005689 CTD:10992 OMA:MKTKMRE
EMBL:AAEX03011631 RefSeq:XP_533224.2 Ensembl:ENSCAFT00000020708
GeneID:476015 KEGG:cfa:476015 Uniprot:E2RL65
Length = 895
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 233/430 (54%), Positives = 293/430 (68%)
Query: 161 RMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIE 220
R +AELKQ+ +RPDVVE+ D TA DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIE
Sbjct: 459 RFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIE 518
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
K PF+LPDFI TGI+++R+A EKE+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+
Sbjct: 519 KPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKW 578
Query: 281 QTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDG-----APPPWLINMQR 335
QTKPKLT HGDLY+EGKEFE +L+E KPG LS +L+ +LGMP G PPPWLI MQR
Sbjct: 579 QTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQR 638
Query: 336 YGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQE-QPNY 394
YGPPPSYP+LKIPGLN+PIP SFGYH GGWGKPPVDE G+PLYGDVFG + E Q
Sbjct: 639 YGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKT 698
Query: 395 EEEPVDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD-G-IQSVDT-------LSSTPTG 445
EEE +D++ WG+L + G I D+ SS P G
Sbjct: 699 EEEEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAG 757
Query: 446 VETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ETP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K
Sbjct: 758 METPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGP 817
Query: 501 AKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN-- 558
A L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+
Sbjct: 818 APE---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAA 869
Query: 559 -EKKRKRKMQ 567
+K++KRK Q
Sbjct: 870 KQKQKKRKAQ 879
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 190/348 (54%), Positives = 231/348 (66%)
Query: 77 AEKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSE---DIDKRDESAQNAESKKK- 132
A V +EYV E+ ++ + F++IFE F D E + +K D+ + KKK
Sbjct: 364 AADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSTAPKKKG 423
Query: 133 -------AXXXXXXXXXXXXPXXXXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATAS 185
+ P R +AELKQ+ +RPDVVE+ D TA
Sbjct: 424 FEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQ 483
Query: 186 DPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEK 245
DPKLLV LKA RN+VPVPRHWC KRK+LQGKRGIEK PF+LPDFI TGI+++R+A EK
Sbjct: 484 DPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEK 543
Query: 246 EDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLRE 305
E+ K +K K RE+++PKMGK+DIDYQ LHDAFFK+QTKPKLT HGDLY+EGKEFE +L+E
Sbjct: 544 EEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKE 603
Query: 306 MKPGILSHDLKEALGMPDG-----APPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 360
KPG LS +L+ +LGMP G PPPWLI MQRYGPPPSYP+LKIPGLN+PIP SF
Sbjct: 604 KKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSF 663
Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDL 408
GYH GGWGKPPVDE G+PLYGDVFG + E EE WG+L
Sbjct: 664 GYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGEL 711
>FB|FBgn0031493 [details] [associations]
symbol:CG3605 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR007180 Pfam:PF04037 EMBL:AE014134 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0005686 eggNOG:COG5182
GeneTree:ENSGT00390000006734 KO:K12829 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 OMA:KNERIGG EMBL:AY061487
RefSeq:NP_608739.1 UniGene:Dm.285 IntAct:Q9VQK7 MINT:MINT-761142
STRING:Q9VQK7 EnsemblMetazoa:FBtr0077669 GeneID:33514
KEGG:dme:Dmel_CG3605 UCSC:CG3605-RA FlyBase:FBgn0031493
InParanoid:Q9VQK7 OrthoDB:EOG40CFZ5 GenomeRNAi:33514 NextBio:783978
Uniprot:Q9VQK7
Length = 749
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 234/515 (45%), Positives = 306/515 (59%)
Query: 78 EKVTVEYVPEKADLDD--GLDDEFRKIFEKFSFHDAAGSEDIDKRDESAQNAESKKKAXX 135
E VT+EYVPEK + D + +F ++FE F + + DK +++ KKA
Sbjct: 217 ENVTIEYVPEKITIADLAPMYRQFYRVFEIFKLENKPKPVEKDKSSHDSESHPRDKKATD 276
Query: 136 XXXXXXXXXXPXXXXXXXXXXXLQRR-------MKIAELKQICSRPDVVEVWDATASDPK 188
L +R + +AELKQ+ SRPDVVE+ D TA DPK
Sbjct: 277 KQLEDEDDDGDDDEERKEDKEKLSKRKLKKLTRLSVAELKQLVSRPDVVEMHDVTARDPK 336
Query: 189 LLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDS 248
LLV LKAYRNTV VPRHWC KRK+LQGKRGIEK PF LP FI TGI ++R++ E+ED+
Sbjct: 337 LLVQLKAYRNTVQVPRHWCFKRKYLQGKRGIEKPPFDLPAFIKKTGIMEMRESLQEREDA 396
Query: 249 KKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKP 308
K LK K RER++PKMGK+DIDYQ LHDAFFK+QTKP++T HGDLY+EGKEFE +L+E KP
Sbjct: 397 KTLKAKMRERVRPKMGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKP 456
Query: 309 GILSHDLKEALGMPDGA-----PPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYH 363
G LS +L+ ALGMP G PPPWLI QRYGPPPSYP+LKIPGLNAPIP G SFGYH
Sbjct: 457 GDLSEELRIALGMPVGPNSHKIPPPWLIAQQRYGPPPSYPNLKIPGLNAPIPDGTSFGYH 516
Query: 364 PGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEPVDKSKHWGDLXXXXXXXXXXXXXXX 423
GGWGKPPVDE G+PLYGDVFG + + N +E + WG+L
Sbjct: 517 AGGWGKPPVDENGKPLYGDVFGTNILDLDNGVDEADIERNQWGELESESEESSEEEEEDG 576
Query: 424 XXXXXXXD---------GIQSVDTLSSTPTGVETPDVIDLRKQQ-RKEPERPLYQVLEEK 473
D G+ + L+S P G+ETP+ I+LRK++ E E VL +
Sbjct: 577 EDLGDQQDETGLVTPVEGLVTPSGLTSVPAGMETPENIELRKKKIEAEMEDNETPVLYQV 636
Query: 474 EERIAPGTLLGTTHTYVVNTGTQDKAGAKRVDLLRGQKTDR---VDVTLQPEELEVMDNV 530
+ G + + +GA + +R TDR V++ L P EL++ ++
Sbjct: 637 LPEKRTDRI-GASMMGSTHVYDVSGSGANKQPPVRST-TDREGIVELALDPSELDLDNDA 694
Query: 531 LPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRK 565
+ +YE+ E++ Q+ED SDM+AE+ ++K K
Sbjct: 695 MAQRYEQQMREQQNHLQKEDLSDMLAEHVARQKSK 729
>ZFIN|ZDB-GENE-070928-1 [details] [associations]
symbol:sf3b2 "splicing factor 3b, subunit 2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003034 InterPro:IPR007180 Pfam:PF02037 Pfam:PF04037
PROSITE:PS50800 SMART:SM00513 ZFIN:ZDB-GENE-070928-1 GO:GO:0005634
GO:GO:0003676 GeneTree:ENSGT00390000006734 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 EMBL:CABZ01073934 EMBL:CABZ01073935
IPI:IPI00484656 Ensembl:ENSDART00000015873 ArrayExpress:F1QLC5
Bgee:F1QLC5 Uniprot:F1QLC5
Length = 826
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 239/524 (45%), Positives = 309/524 (58%)
Query: 79 KVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSEDIDKRDESAQNAES---KKKAXX 135
+V +EYV E+ + D F++IFE F D E +K E + E KKK
Sbjct: 297 EVEIEYVTEEPAIYDPNFIFFKRIFEAFKLTDDVKKEK-EKEPEKPEKPEILSFKKKGFE 355
Query: 136 XXXXXXXXXXPXXXXXX--XXXXXLQR--RMKIAELKQICSRPDVVEVWDATASDPKLLV 191
L+R R+ +AELKQ+ +RPDVVE+ D TA +PKLLV
Sbjct: 356 LEKRDSDDSDEEIKKDLPKLSKKKLRRMNRLTVAELKQLVARPDVVEMHDVTAQEPKLLV 415
Query: 192 FLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKL 251
LKA RNTVPVPRHWC KRK+LQGKRGIEK PF+LP+FI TGI+++R+A EKED+K +
Sbjct: 416 HLKATRNTVPVPRHWCFKRKYLQGKRGIEKPPFELPEFIRRTGIQEMREALQEKEDAKTM 475
Query: 252 KQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGIL 311
K K RE+++PKMGK+DIDYQ LHDAFFK+Q KPKLT HGDLY+EGKEFE +L+E KPG L
Sbjct: 476 KTKMREKVRPKMGKIDIDYQKLHDAFFKWQIKPKLTIHGDLYYEGKEFETRLKEKKPGDL 535
Query: 312 SHDLKEALGMPDG-----APPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 366
S +L+ ALGMP G PPPWLI MQRYGPPPSYP+LKIPGLNAPIP G SFGYH GG
Sbjct: 536 SDELRVALGMPTGPNSHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCSFGYHAGG 595
Query: 367 WGKPPVDEYGRPLYGDVFGIHQQE-QPNYEEEPVDKSKHWGDLXXXXXXXXXXXXXXXXX 425
WGKPPVDE G+PLYGDVFG + + Q EEE VD++ WG+L
Sbjct: 596 WGKPPVDETGKPLYGDVFGTNSIDFQAKAEEEEVDRTP-WGELEPSDEESSEEEEEEESD 654
Query: 426 X-----------XXXXDGIQSVDTLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKE 474
G+ + SS P G+ETP++I+LRK++ +E +
Sbjct: 655 EEKPDETGFFTPADSHSGLITPGGFSSVPAGMETPELIELRKKKIEEAM--------DGN 706
Query: 475 ERIAPGTLLGTTHTYVVNTGTQDKAGAKRVDLLRGQKTDRVDVTLQPEELEVMDNVL-PA 533
E T+L T V G A D+ + +V V++ + + ++ L P
Sbjct: 707 ETPQLFTVLPERRTGPV--GAAMMASTHIYDMTTTVTSRKVGVSVLGGDSQGVEVALAPE 764
Query: 534 KYE------EAREEEKLRSQ---REDFSDMVAENEKKRKRKMQE 568
+ E + EE +R Q +EDFSDMVAE+ K+K+K ++
Sbjct: 765 ELELDPMAMTQKYEEHVREQQVEKEDFSDMVAEHAAKQKQKKRK 808
Score = 503 (182.1 bits), Expect = 4.7e-53, Sum P(3) = 4.7e-53
Identities = 118/263 (44%), Positives = 154/263 (58%)
Query: 326 PPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFG 385
PPPWLI MQRYGPPPSYP+LKIPGLNAPIP G SFGYH GGWGKPPVDE G+PLYGDVFG
Sbjct: 555 PPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCSFGYHAGGWGKPPVDETGKPLYGDVFG 614
Query: 386 IHQQE-QPNYEEEPVDKSKHWGDLXXXXXXXXXXXXXXXXXX-----------XXXXDGI 433
+ + Q EEE VD++ WG+L G+
Sbjct: 615 TNSIDFQAKAEEEEVDRTP-WGELEPSDEESSEEEEEEESDEEKPDETGFFTPADSHSGL 673
Query: 434 QSVDTLSSTPTGVETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHT 488
+ SS P G+ETP++I+LRK++ +E E P L+ VL E+ ++ +TH
Sbjct: 674 ITPGGFSSVPAGMETPELIELRKKKIEEAMDGNETPQLFTVLPERRTGPVGAAMMASTHI 733
Query: 489 Y-VVNTGTQDKAGAKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQ 547
Y + T T K G V +L G + V+V L PEELE+ + KYEE E+++ +
Sbjct: 734 YDMTTTVTSRKVG---VSVLGGD-SQGVEVALAPEELELDPMAMTQKYEEHVREQQV--E 787
Query: 548 REDFSDMVAEN---EKKRKRKMQ 567
+EDFSDMVAE+ +K++KRK Q
Sbjct: 788 KEDFSDMVAEHAAKQKQKKRKAQ 810
Score = 49 (22.3 bits), Expect = 4.7e-53, Sum P(3) = 4.7e-53
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 89 ADLDDGLDDEFRKIFEKFSFHDAAGSEDIDKRDESAQNAESKKK 132
A +D DD+ ++ + D + K+D++ + KKK
Sbjct: 229 APTEDDDDDDLAELTNIHGYSDEDDENSLSKKDKNRKRRNRKKK 272
Score = 46 (21.3 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 308 PGILSHDLKEALGMPDGAPPPWLINMQRYGPPPSYPHLKIPGL 350
PG+ ++ +P +NM GPPP + ++ PG+
Sbjct: 69 PGLPPMPPMPSMPLPPSMNMMQAMNMMVGGPPPIHMAMEPPGM 111
Score = 44 (20.5 bits), Expect = 4.7e-53, Sum P(3) = 4.7e-53
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 236 EKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDY----QVLHDA---FFKYQTKP-KLT 287
+K ++ E+E ++ ++K+++ +P++ +I+Y ++D FFK + KLT
Sbjct: 271 KKKKKKQREQEKEQQDEEKKKDEKEPEV---EIEYVTEEPAIYDPNFIFFKRIFEAFKLT 327
Query: 288 SHGDLYHEGKEFEVKLREMKPGILSHDLK 316
D+ E KE E + E KP ILS K
Sbjct: 328 D--DVKKE-KEKEPEKPE-KPEILSFKKK 352
Score = 37 (18.1 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 245 KEDSKKLKQKQRERMQPK 262
K ++K K+K+++R Q K
Sbjct: 265 KRRNRKKKKKKKQREQEK 282
>WB|WBGene00021004 [details] [associations]
symbol:W03F9.10 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR007180 Pfam:PF04037 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0018996 GO:GO:0040011
GO:GO:0040035 eggNOG:COG5182 GeneTree:ENSGT00390000006734 KO:K12829
InterPro:IPR006568 Pfam:PF04046 SMART:SM00581 HOGENOM:HOG000159304
EMBL:FO081767 PIR:A88923 RefSeq:NP_503141.1
ProteinModelPortal:O16997 DIP:DIP-26706N IntAct:O16997
MINT:MINT-1108788 STRING:O16997 PaxDb:O16997
EnsemblMetazoa:W03F9.10.1 EnsemblMetazoa:W03F9.10.2 GeneID:178542
KEGG:cel:CELE_W03F9.10 UCSC:W03F9.10 CTD:178542 WormBase:W03F9.10
InParanoid:O16997 OMA:KNERIGG NextBio:901560 Uniprot:O16997
Length = 602
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 205/430 (47%), Positives = 268/430 (62%)
Query: 164 IAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQP 223
IA+LK+ R DVVE D T+ DP LLV +K+YRN+VPVPRHW KRK+L GKRG E+ P
Sbjct: 160 IAKLKETTLRADVVEWADVTSRDPYLLVAMKSYRNSVPVPRHWNAKRKYLAGKRGFERPP 219
Query: 224 FQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTK 283
F+LPDFI TGI+ +R+A +EKE+S+ LK K RER +PK+GK+DIDYQ LHDAFFK+QTK
Sbjct: 220 FELPDFIKRTGIQDMREALLEKEESQSLKSKMRERARPKLGKIDIDYQKLHDAFFKWQTK 279
Query: 284 PKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDGA-----PPPWLINMQRYGP 338
P +T G+LY+EGKE E +R+ KPG +S +L+ ALGMP G+ PPPWLI MQRYGP
Sbjct: 280 PAMTKMGELYYEGKEMEAMMRDKKPGEMSDELRIALGMPIGSNAFKFPPPWLIAMQRYGP 339
Query: 339 PPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEP 398
PPS+PH+KIPGLNAPIP G +FGYH GGWGKPPVDEYG PLYGDVFG+ +E
Sbjct: 340 PPSFPHIKIPGLNAPIPEGCAFGYHAGGWGKPPVDEYGHPLYGDVFGLAAPAFEPEDESQ 399
Query: 399 VDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD---GIQSVDTLSS--TP-------TGV 446
+++ ++WG++ D G Q+ + TP TG+
Sbjct: 400 IER-RYWGEIGSDESSDEEESEEEEHADDDDADVEGGFQTPAPVEGMITPSGMTTGITGI 458
Query: 447 ETPDVIDLRKQQRKEPERPLYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAGAKRVDL 506
ETPD I+LRK KE VL A + + + G Q A + DL
Sbjct: 459 ETPDTIELRKG--KESS-----VLGTDTPAAAYHIIPEKKNERI---GGQMMASSHTYDL 508
Query: 507 LRGQ--KTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQ----REDFSDMVAENEK 560
+ + D V ++L PE +++ + L A+YEE ++K R RED +DMVAE+
Sbjct: 509 SKKHAVRDDGVQISLDPESIDMDEQGLAARYEEQLRKQKHRDDDDEDREDLTDMVAEHAA 568
Query: 561 K--RKRKMQE 568
K RKRK+Q+
Sbjct: 569 KQNRKRKVQD 578
>UNIPROTKB|O16997 [details] [associations]
symbol:W03F9.10 "Protein W03F9.10" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR007180 Pfam:PF04037 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0040035 eggNOG:COG5182
GeneTree:ENSGT00390000006734 KO:K12829 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 HOGENOM:HOG000159304 EMBL:FO081767
PIR:A88923 RefSeq:NP_503141.1 ProteinModelPortal:O16997
DIP:DIP-26706N IntAct:O16997 MINT:MINT-1108788 STRING:O16997
PaxDb:O16997 EnsemblMetazoa:W03F9.10.1 EnsemblMetazoa:W03F9.10.2
GeneID:178542 KEGG:cel:CELE_W03F9.10 UCSC:W03F9.10 CTD:178542
WormBase:W03F9.10 InParanoid:O16997 OMA:KNERIGG NextBio:901560
Uniprot:O16997
Length = 602
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 205/430 (47%), Positives = 268/430 (62%)
Query: 164 IAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQP 223
IA+LK+ R DVVE D T+ DP LLV +K+YRN+VPVPRHW KRK+L GKRG E+ P
Sbjct: 160 IAKLKETTLRADVVEWADVTSRDPYLLVAMKSYRNSVPVPRHWNAKRKYLAGKRGFERPP 219
Query: 224 FQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTK 283
F+LPDFI TGI+ +R+A +EKE+S+ LK K RER +PK+GK+DIDYQ LHDAFFK+QTK
Sbjct: 220 FELPDFIKRTGIQDMREALLEKEESQSLKSKMRERARPKLGKIDIDYQKLHDAFFKWQTK 279
Query: 284 PKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDGA-----PPPWLINMQRYGP 338
P +T G+LY+EGKE E +R+ KPG +S +L+ ALGMP G+ PPPWLI MQRYGP
Sbjct: 280 PAMTKMGELYYEGKEMEAMMRDKKPGEMSDELRIALGMPIGSNAFKFPPPWLIAMQRYGP 339
Query: 339 PPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEP 398
PPS+PH+KIPGLNAPIP G +FGYH GGWGKPPVDEYG PLYGDVFG+ +E
Sbjct: 340 PPSFPHIKIPGLNAPIPEGCAFGYHAGGWGKPPVDEYGHPLYGDVFGLAAPAFEPEDESQ 399
Query: 399 VDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD---GIQSVDTLSS--TP-------TGV 446
+++ ++WG++ D G Q+ + TP TG+
Sbjct: 400 IER-RYWGEIGSDESSDEEESEEEEHADDDDADVEGGFQTPAPVEGMITPSGMTTGITGI 458
Query: 447 ETPDVIDLRKQQRKEPERPLYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAGAKRVDL 506
ETPD I+LRK KE VL A + + + G Q A + DL
Sbjct: 459 ETPDTIELRKG--KESS-----VLGTDTPAAAYHIIPEKKNERI---GGQMMASSHTYDL 508
Query: 507 LRGQ--KTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQ----REDFSDMVAENEK 560
+ + D V ++L PE +++ + L A+YEE ++K R RED +DMVAE+
Sbjct: 509 SKKHAVRDDGVQISLDPESIDMDEQGLAARYEEQLRKQKHRDDDDEDREDLTDMVAEHAA 568
Query: 561 K--RKRKMQE 568
K RKRK+Q+
Sbjct: 569 KQNRKRKVQD 578
>POMBASE|SPAC22F8.10c [details] [associations]
symbol:sap145 "U2 snRNP-associated protein Sap145
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000245
"spliceosomal complex assembly" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0005686 "U2
snRNP" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR007180 Pfam:PF04037 PomBase:SPAC22F8.10c GO:GO:0005737
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
GO:GO:0000245 GO:GO:0005686 eggNOG:COG5182 KO:K12829
OrthoDB:EOG4VMJPZ InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
PIR:T38200 RefSeq:NP_594733.1 IntAct:Q9UUI3 STRING:Q9UUI3
EnsemblFungi:SPAC22F8.10c.1 GeneID:2541609 KEGG:spo:SPAC22F8.10c
HOGENOM:HOG000159304 OMA:NAVHENE NextBio:20802703 Uniprot:Q9UUI3
Length = 601
Score = 842 (301.5 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 165/320 (51%), Positives = 209/320 (65%)
Query: 90 DLDDGLDDEFRKIFEKFSFHDAAGSE-DIDKRDESAQNAESKKKAXXXXXXXXXXXXPXX 148
D +D L ++F+ +F +F A G E D + D+ Q S +
Sbjct: 119 DPNDPLIEQFKDVFNRFK---ADGQEKDFEDTDKG-QIMYSDDEILSEGEEDALQKQQEE 174
Query: 149 XXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQ 208
L +RM +A+LK + + DVVE WD ++ DP L LKAY NTVPVPRHW Q
Sbjct: 175 KLSKKKLRKL-KRMTVAQLKMLSEKADVVEWWDVSSLDPLFLTHLKAYPNTVPVPRHWNQ 233
Query: 209 KRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDI 268
KR +L G+RGIE+Q F+LP +I ATGI ++R A E E L+QK RER+QPKMGK+DI
Sbjct: 234 KRDYLSGQRGIERQLFELPSYIRATGIVQMRNAVHENEADMPLRQKMRERVQPKMGKLDI 293
Query: 269 DYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDGAPPP 328
DYQ LHDAFF+YQTKP LT G+ Y EGKE E ++E +PG +S +L+EALG+ GAPPP
Sbjct: 294 DYQKLHDAFFRYQTKPVLTGFGECYFEGKELEADVKEKRPGDISEELREALGIAPGAPPP 353
Query: 329 WLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQ 388
WL MQRYGPPPSYP LKIPG+N PIP GA +G+HPGGWGKPPVD++ RPLYGDVFG +
Sbjct: 354 WLFAMQRYGPPPSYPDLKIPGVNCPIPTGAQWGFHPGGWGKPPVDQFNRPLYGDVFGNVK 413
Query: 389 QEQPNYEEEPVDKSKHWGDL 408
PV ++HWG+L
Sbjct: 414 PRIHAGTGSPVS-TQHWGEL 432
Score = 77 (32.2 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 35/116 (30%), Positives = 54/116 (46%)
Query: 444 TGVETPDVIDLRKQQRKEPE---RPLYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ VE D ++LRK + + R LYQVL EK I+ G +G H Y + T +D
Sbjct: 489 SNVEV-DNVELRKNTQPSSDAANRDLYQVLPEKSTNIS-G-FMGPQHQYDIPTA-EDTLP 544
Query: 501 AKRVDLLRGQKTDRVDVTLQP-----EELEVMDNVLPAKYEEAREEEKLRSQREDF 551
KR T++ DV L +EL + + K A+ + K +S+R+ F
Sbjct: 545 QKRNAHSMLSSTNKGDVALNQSSNWQDELSELVSEQAMKVGAAKRQ-KTQSKRDKF 599
Score = 42 (19.8 bits), Expect = 1.7e-86, Sum P(2) = 1.7e-86
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 510 QKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQRED 550
++ + DV EE+ + + +Y+ A E RSQRED
Sbjct: 442 EEEESEDVEYPTEEITERETI--EEYQSASEP---RSQRED 477
>ASPGD|ASPL0000031751 [details] [associations]
symbol:AN5098 species:162425 "Emericella nidulans"
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006397 "mRNA processing"
evidence=IEA] InterPro:IPR007180 Pfam:PF04037 GO:GO:0005634
EMBL:BN001305 InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
EnsemblFungi:CADANIAT00003081 OMA:LINQQRY Uniprot:C8VEV9
Length = 549
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 163/290 (56%), Positives = 209/290 (72%)
Query: 161 RMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIE 220
++ +AELK + +P++VE D +A DP+LLV +KA+RN VPVP HW KR++L KRGIE
Sbjct: 116 KLSVAELKAMVKKPELVEWTDTSAPDPRLLVHIKAHRNVVPVPSHWSLKREYLSSKRGIE 175
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
K PF LP FI TGI ++R A +EK++ LKQKQRER+QPKMG++DIDYQ L++AFF++
Sbjct: 176 KAPFSLPKFIQETGIAEMRDAALEKQEQATLKQKQRERVQPKMGRLDIDYQKLYEAFFRF 235
Query: 281 QTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDGAPPPWLINMQRYGPPP 340
QTKP+LT +G++Y+EGKEFE R ++PG LS +LKEAL MP GAPPPWLIN QRYGPPP
Sbjct: 236 QTKPELTRYGEVYYEGKEFETNQRHLRPGELSSELKEALNMPPGAPPPWLINQQRYGPPP 295
Query: 341 SYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYG-DVFGIHQQEQPNYEEEPV 399
SYP LKIPGLNAP PPGA +GYHPGG+GKPPVDE+ RPLYG D+FG+ Q +Q + EPV
Sbjct: 296 SYPALKIPGLNAPPPPGAMWGYHPGGYGKPPVDEHNRPLYGGDIFGVLQPQQTMQQGEPV 355
Query: 400 DKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXDGIQSVDTLSSTPTGVETP 449
+K WG+L + VD TP+G+E+P
Sbjct: 356 EKDL-WGELQEPELSDEDSEDEEEELDE------EDVDAGLQTPSGMESP 398
>DICTYBASE|DDB_G0284555 [details] [associations]
symbol:sf3b2 "splicing factor 3B subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] InterPro:IPR007180 Pfam:PF04037
dictyBase:DDB_G0284555 GenomeReviews:CM000153_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003723 EMBL:AAFI02000066 eggNOG:COG5182
KO:K12829 InterPro:IPR006568 Pfam:PF04046 SMART:SM00581 OMA:KNERIGG
RefSeq:XP_001134544.1 STRING:Q1ZXF6 EnsemblProtists:DDB0233170
GeneID:8624627 KEGG:ddi:DDB_G0284555 InParanoid:Q1ZXF6
ProtClustDB:CLSZ2847453 Uniprot:Q1ZXF6
Length = 625
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 177/422 (41%), Positives = 259/422 (61%)
Query: 159 QRRMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRG 218
QR++ + LKQ+ RPDVVE+ D + +P L+ +K+YRNT+PVP HWCQK+K+LQGKRG
Sbjct: 177 QRKLHLPILKQLVDRPDVVELHDVNSPNPGYLIAMKSYRNTIPVPAHWCQKKKYLQGKRG 236
Query: 219 IEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFF 278
K PF+LP FIAATGI KIR+A +EKE K KQKQRER+QPK+ KM IDY+VL DAFF
Sbjct: 237 FVKPPFELPSFIAATGITKIREAILEKEKEMKSKQKQRERVQPKIRKMGIDYEVLRDAFF 296
Query: 279 KYQTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDGAPPPWLINMQRYGP 338
+QTKP L+ GDLY+EGKEFEV L+ KPG+LS +LK ALGM +G PPPWLI MQ YGP
Sbjct: 297 VHQTKPNLSIQGDLYYEGKEFEVNLKNKKPGVLSDELKRALGMIEGYPPPWLIYMQTYGP 356
Query: 339 PPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYEEEP 398
PPSYP+LKIPG+N+PIP GA +G+HPGGWG+P ++E+G+PLY +V + N +++
Sbjct: 357 PPSYPNLKIPGVNSPIPEGAQYGFHPGGWGRPVLNEFGKPLYENVNNNNNNINNNGDQQQ 416
Query: 399 VDKSKH-----WGDLXXXXXXXXXXXXXXXXXXXXXXDGIQ--------SV-DTLSSTPT 444
+ H WG+L D +Q S+ D +SS P+
Sbjct: 417 QQQQSHPTREYWGELLPESEDFQEEEEQQEQQGTEE-DELQQHQLEDDESIGDGISSVPS 475
Query: 445 GVETPDVIDLRKQQRKEPERPLYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAGA--K 502
G+ETPD+++++K + + ++ Q E + I ++ + + + +
Sbjct: 476 GLETPDIVNIKKSRYDQQQQQQQQQPRELYQVIEQQNKNSSSGGLMESAHRYNIPSVIKQ 535
Query: 503 RVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEARE-EEKLRSQREDFSDMVAENEKK 561
+ + Q + RVDV V + P++ E +E +E+L ++ + + + ++
Sbjct: 536 QQQQQQQQNSSRVDVIKSQRSAPVEITLNPSEVENGQEIDEELLKKKYEQATQALQKQRP 595
Query: 562 RK 563
++
Sbjct: 596 KE 597
Score = 199 (75.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 47/149 (31%), Positives = 85/149 (57%)
Query: 431 DGIQSVDTLSSTPTGVETPDV-IDLRKQQRKEPERPLYQVLEEKEERIAPGTLLGTTHTY 489
DGI SV + TP V D ++QQ+++ R LYQV+E++ + + G L+ + H Y
Sbjct: 468 DGISSVPSGLETPDIVNIKKSRYDQQQQQQQQQPRELYQVIEQQNKNSSSGGLMESAHRY 527
Query: 490 VVNT------GTQDKAGAKRVDLLRGQKTDRVDVTLQPEELE----VMDNVLPAKYEEAR 539
+ + Q + + RVD+++ Q++ V++TL P E+E + + +L KYE+A
Sbjct: 528 NIPSVIKQQQQQQQQQNSSRVDVIKSQRSAPVEITLNPSEVENGQEIDEELLKKKYEQAT 587
Query: 540 EEEKLRSQREDFSDMVAENEKKRKRKMQE 568
+ + + +ED SD++ E KKRK ++Q+
Sbjct: 588 QALQKQRPKEDISDIIEEQNKKRKNQLQK 616
Score = 52 (23.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 244 EKEDSKKLKQKQRERMQ 260
E EDSKKL K+R+R +
Sbjct: 162 EDEDSKKLSNKERKRQR 178
Score = 39 (18.8 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 244 EKEDSKKLKQKQRERMQPKMGKMD 267
E+E+ ++ ++K+RE + + K D
Sbjct: 120 EQEEQEEKERKEREEEEERKKKED 143
Score = 38 (18.4 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 244 EKEDSKKLKQKQRE 257
+KE KK KQ+++E
Sbjct: 30 KKEQKKKQKQQKKE 43
>UNIPROTKB|G4NAE3 [details] [associations]
symbol:MGG_03182 "Splicing factor 3B subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007180 Pfam:PF04037
GO:GO:0005634 EMBL:CM001234 KO:K12829 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 RefSeq:XP_003716807.1
EnsemblFungi:MGG_03182T0 GeneID:2676555 KEGG:mgr:MGG_03182
Uniprot:G4NAE3
Length = 614
Score = 823 (294.8 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 179/384 (46%), Positives = 224/384 (58%)
Query: 78 EKVTVEYVPEKADLDDGLDDEFRKIFEKFSFHDAAGSEDIDKRDESAQNAESKKKAXXXX 137
+K+ ++ +PE D DD +R I KF+ ED RD +N E
Sbjct: 66 DKIAIDELPE-FDEDDPNFALYRDIISKFT---VPLDEDGVPRDSKNRNKEEVFYGDDDN 121
Query: 138 XXXXXXXXPXXXXXXXXXXXLQRRMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYR 197
++ IAELK + P+VVE D ++SDP+LLV +KA R
Sbjct: 122 YGSEDEEASGETKLSKRKRKKLGKLSIAELKALVRNPEVVEWHDVSSSDPRLLVQIKAQR 181
Query: 198 NTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRE 257
N VPVP HW KR++L KRGIEK PF+LP+FIA TGI ++R A +EK+ + LKQKQRE
Sbjct: 182 NIVPVPGHWSLKREYLSSKRGIEKPPFRLPNFIAETGITEMRDAVLEKQAEQTLKQKQRE 241
Query: 258 RMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKE 317
R+ PKMGK+DIDYQ L+DAFF++Q KP LT GD+YHEGKEFE R KPG LS LKE
Sbjct: 242 RVAPKMGKLDIDYQKLYDAFFRFQEKPPLTRFGDVYHEGKEFEADYRYFKPGELSDALKE 301
Query: 318 ALGMPDGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGR 377
ALGM G PPPWL+ QR GPPPSYP LKIPGLNAP+P GA++G+ PG WGKPP+DEY R
Sbjct: 302 ALGMQPGFPPPWLLQQQRMGPPPSYPTLKIPGLNAPLPNGAAWGFAPGQWGKPPLDEYNR 361
Query: 378 PLYG-DVFGI-----------HQQEQPNYEEEPVDKSKHWGDLXXXXXXXXXXXXXXXXX 425
P+YG D+FGI Q P EPV+K+ WG+L
Sbjct: 362 PIYGGDIFGILAGNPAGAPGAQQTTGPAQAGEPVEKTL-WGELQPPAEESEDEEEEEDEE 420
Query: 426 XXXXXDGIQSVDTLSSTPTGVETP 449
DG + TP+G+ETP
Sbjct: 421 EEEEEDG--DLPGGLQTPSGLETP 442
Score = 38 (18.4 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 32/121 (26%), Positives = 51/121 (42%)
Query: 444 TGVETPD-VIDLRKQQRKEPERPLYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAGAK 502
TG D V DL K Q K P L Q + +R PG + V+ G QD G
Sbjct: 498 TGFFGSDRVYDLSKNQNKGPV--LGQDDDSGRKRKKPGDVDVALDPDVL-VG-QD--GIS 551
Query: 503 RVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAENEKKR 562
+ +L R + R + + + D++ +E+R+ +K +R AE +K+
Sbjct: 552 KDELRRKFEEGRREEG-PGAKWQYDDDLSEMIAQESRKRQKRDEERRGGGSGGAEKKKEA 610
Query: 563 K 563
K
Sbjct: 611 K 611
>UNIPROTKB|H0YEX5 [details] [associations]
symbol:SF3B2 "Splicing factor 3B subunit 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 EMBL:AP006287
InterPro:IPR006568 Pfam:PF04046 SMART:SM00581 HGNC:HGNC:10769
PRIDE:H0YEX5 Ensembl:ENST00000530981 Bgee:H0YEX5 Uniprot:H0YEX5
Length = 315
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 148/307 (48%), Positives = 190/307 (61%)
Query: 283 KPKLTSHGDLYHEGKEFEVKLREMKPGILSHDLKEALGMPDG-----APPPWLINMQRYG 337
KPKLT HGDLY+EGKEFE +L+E KPG LS +L+ +LGMP G PPPWLI MQRYG
Sbjct: 2 KPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYG 61
Query: 338 PPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQE-QPNYEE 396
PPPSYP+LKIPGLN+PIP SFGYH GGWGKPPVDE G+PLYGDVFG + E Q EE
Sbjct: 62 PPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEE 121
Query: 397 EPVDKSKHWGDLXXXXXXXXXXXXXXXXXXXXXXD-G-IQSVDT-------LSSTPTGVE 447
E +D++ WG+L + G I D+ SS P G+E
Sbjct: 122 EEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGME 180
Query: 448 TPDVIDLRKQQRKEP---ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAGAKR 503
TP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K A
Sbjct: 181 TPELIELRKKKIEEAMDGETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPE 240
Query: 504 VDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN---EK 560
L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+ +K
Sbjct: 241 ---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAAKQK 292
Query: 561 KRKRKMQ 567
++KRK Q
Sbjct: 293 QKKRKAQ 299
>CGD|CAL0000205 [details] [associations]
symbol:orf19.7581 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0071004 "U2-type
prespliceosome" evidence=IEA] [GO:0005686 "U2 snRNP" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
InterPro:IPR007180 Pfam:PF04037 CGD:CAL0000205 GO:GO:0005634
EMBL:AACQ01000032 eggNOG:COG5182 KO:K12829 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 HOGENOM:HOG000159304 RefSeq:XP_719343.1
STRING:Q5ACR1 GeneID:3639035 KEGG:cal:CaO19.7581 Uniprot:Q5ACR1
Length = 471
Score = 477 (173.0 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 104/274 (37%), Positives = 154/274 (56%)
Query: 92 DDGLDDEFRKIFEKFSFH---DAAGSEDI-DKRDESAQNAESKKKAXXXXXXXXXXXXPX 147
DD L ++F+ + KF+ + E D +D QN +S +
Sbjct: 51 DDPLYEQFQSVLNKFNNPQEIEITKQESTEDSKDLVYQNGDSSENESDDEDSSDENDEET 110
Query: 148 XXXXXXXXXX---LQRRMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPR 204
+Q ++ +A+LK P VVE +D + DP LL+ +K+ N +PVP
Sbjct: 111 QKQQQQLSKRQLRIQNKIPLAKLKSSVKSPQVVEWYDVDSKDPYLLIAMKSQPNIIPVPS 170
Query: 205 HWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMG 264
HW KR +L +RGIEK P+QLP +I ATGI ++R D + L+Q+QRE++QPKMG
Sbjct: 171 HWSSKRNYLSSRRGIEKLPYQLPKYIQATGISEMRSG---GRDHRTLRQQQREKVQPKMG 227
Query: 265 KMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGK----EFEVKLREMKPGILSHDLKEALG 320
K+D+DY+ L+ AF K+Q KP++ +G+L+ EGK E K ++KPGI+S +++ AL
Sbjct: 228 KLDMDYEKLYQAFSKFQIKPRVFPYGELFEEGKHSNDELVTKAAKIKPGIISLEMRSALS 287
Query: 321 MP--DGA-PPPWLINMQRYGPPPSYPHLKIPGLN 351
MP DG PP W+ M+ G PPSY L IPGL+
Sbjct: 288 MPQNDGTIPPAWVTIMRDIGKPPSYKDLVIPGLD 321
Score = 37 (18.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 400 DKSKHWGDL 408
+K KHWG L
Sbjct: 339 EKLKHWGAL 347
>UNIPROTKB|Q5ACR1 [details] [associations]
symbol:CUS1 "Potential spliceosomal U2 snRNP protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007180 Pfam:PF04037
CGD:CAL0000205 GO:GO:0005634 EMBL:AACQ01000032 eggNOG:COG5182
KO:K12829 InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
HOGENOM:HOG000159304 RefSeq:XP_719343.1 STRING:Q5ACR1
GeneID:3639035 KEGG:cal:CaO19.7581 Uniprot:Q5ACR1
Length = 471
Score = 477 (173.0 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 104/274 (37%), Positives = 154/274 (56%)
Query: 92 DDGLDDEFRKIFEKFSFH---DAAGSEDI-DKRDESAQNAESKKKAXXXXXXXXXXXXPX 147
DD L ++F+ + KF+ + E D +D QN +S +
Sbjct: 51 DDPLYEQFQSVLNKFNNPQEIEITKQESTEDSKDLVYQNGDSSENESDDEDSSDENDEET 110
Query: 148 XXXXXXXXXX---LQRRMKIAELKQICSRPDVVEVWDATASDPKLLVFLKAYRNTVPVPR 204
+Q ++ +A+LK P VVE +D + DP LL+ +K+ N +PVP
Sbjct: 111 QKQQQQLSKRQLRIQNKIPLAKLKSSVKSPQVVEWYDVDSKDPYLLIAMKSQPNIIPVPS 170
Query: 205 HWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMG 264
HW KR +L +RGIEK P+QLP +I ATGI ++R D + L+Q+QRE++QPKMG
Sbjct: 171 HWSSKRNYLSSRRGIEKLPYQLPKYIQATGISEMRSG---GRDHRTLRQQQREKVQPKMG 227
Query: 265 KMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGK----EFEVKLREMKPGILSHDLKEALG 320
K+D+DY+ L+ AF K+Q KP++ +G+L+ EGK E K ++KPGI+S +++ AL
Sbjct: 228 KLDMDYEKLYQAFSKFQIKPRVFPYGELFEEGKHSNDELVTKAAKIKPGIISLEMRSALS 287
Query: 321 MP--DGA-PPPWLINMQRYGPPPSYPHLKIPGLN 351
MP DG PP W+ M+ G PPSY L IPGL+
Sbjct: 288 MPQNDGTIPPAWVTIMRDIGKPPSYKDLVIPGLD 321
Score = 37 (18.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 400 DKSKHWGDL 408
+K KHWG L
Sbjct: 339 EKLKHWGAL 347
>SGD|S000004853 [details] [associations]
symbol:CUS1 "Protein required for assembly of U2 snRNP into
the spliceosome" species:4932 "Saccharomyces cerevisiae"
[GO:0005686 "U2 snRNP" evidence=IDA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0071004 "U2-type prespliceosome" evidence=IDA]
InterPro:IPR007180 InterPro:IPR027203 Pfam:PF04037 SGD:S000004853
GO:GO:0003723 EMBL:BK006946 GO:GO:0000245 GO:GO:0005686
GO:GO:0071004 EMBL:Z48756 EMBL:U27016 EMBL:AY723856 PIR:S56054
RefSeq:NP_013967.1 ProteinModelPortal:Q02554 DIP:DIP-910N
IntAct:Q02554 MINT:MINT-474095 STRING:Q02554 PaxDb:Q02554
EnsemblFungi:YMR240C GeneID:855281 KEGG:sce:YMR240C CYGD:YMR240c
eggNOG:COG5182 GeneTree:ENSGT00390000006734 HOGENOM:HOG000000768
KO:K12829 OMA:VEWYDVD OrthoDB:EOG4VMJPZ NextBio:978914
Genevestigator:Q02554 GermOnline:YMR240C InterPro:IPR006568
PANTHER:PTHR12785:SF4 Pfam:PF04046 SMART:SM00581 Uniprot:Q02554
Length = 436
Score = 405 (147.6 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 101/329 (30%), Positives = 163/329 (49%)
Query: 91 LDDGLDDEFRKIFEKFSFHDAAGSEDIDKRDESAQNAESKKKAXXXXXXXXXXX---XPX 147
+D L+ EF+ + ++F + ++I K +++ +K P
Sbjct: 55 VDAKLEKEFKDVLQRFQVQENDTPKEITKDEKNNHVVIVEKNPVMNRKHTAEDELEDTPS 114
Query: 148 XXXXXXXXXXLQRRMKIAELKQICSR---PDVVEVWDATASDPKLLVFLKAYRNTVPVPR 204
+R+ + L Q+ S+ P ++E +D A P LL +K +N +PVP
Sbjct: 115 DGIEEHLSARKRRKTEKPSLSQLKSQVPYPQIIEWYDCDARYPGLLASIKCTKNVIPVPS 174
Query: 205 HWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR----QAYIEKEDSKKLKQKQRERMQ 260
HW K+++L G+ + K+PF+LPD I T IE++R Q+ ++ +D K LK+ R R+Q
Sbjct: 175 HWQSKKEYLSGRSLLGKRPFELPDIIKKTNIEQMRSTLPQSGLDGQDEKSLKEASRARVQ 234
Query: 261 PKMGKMDIDYQVLHDAFFKYQT--KPK-LTSHGDLYHEGKEF--EVKLREM----KPGIL 311
PKMG +D+DY+ LHD FFK KP L GD+Y+E + E + M +PG +
Sbjct: 235 PKMGALDLDYKKLHDVFFKIGANWKPDHLLCFGDVYYENRNLFEETNWKRMVDHKRPGRI 294
Query: 312 SHDLKEALGMPDGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIP--PGASFG-YHPGGWG 368
S +L+ + +P+G PPW + M+ G P YP LKI GLN I G +G P
Sbjct: 295 SQELRAIMNLPEGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIPNHHS 354
Query: 369 KPPVDEYGRPLYGDVFGIHQQEQPNYEEE 397
+ + GR +G + E N +E+
Sbjct: 355 RSK--KQGRNYFGALISFETPEFENSKED 381
Score = 39 (18.8 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 541 EEKLRSQREDFSDMVAENEKKRKRKMQE 568
E KL +ED S+ V E+K +R +E
Sbjct: 400 EHKLDHFQEDISE-VTSAEEKLERNEEE 426
>TAIR|locus:2200126 [details] [associations]
symbol:AT1G11520 "AT1G11520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 eggNOG:COG5182
EMBL:AC011661 IPI:IPI00545648 RefSeq:NP_172619.1 UniGene:At.22888
UniGene:At.51571 EnsemblPlants:AT1G11520.1 GeneID:837695
KEGG:ath:AT1G11520 TAIR:At1g11520 PhylomeDB:Q9LPY3
Genevestigator:Q9LPY3 Uniprot:Q9LPY3
Length = 196
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 84/114 (73%), Positives = 95/114 (83%)
Query: 431 DGIQSVDTLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEERI-APGTLLGTTHTY 489
D + +LSSTPTG+ETPD I+LRK+QRKEP+R LYQVLEEK E + APGTLL TTHTY
Sbjct: 85 DAMDVSKSLSSTPTGIETPDAIELRKEQRKEPDRALYQVLEEKGESVVAPGTLLRTTHTY 144
Query: 490 VVNTGTQDKAGAKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEK 543
V+ TGTQDK G KRVDLLRGQKTDRVD +LQPEEL+ M NVL +YEEAREEEK
Sbjct: 145 VIKTGTQDKTGTKRVDLLRGQKTDRVDFSLQPEELDAMGNVL--QYEEAREEEK 196
>RGD|1307159 [details] [associations]
symbol:Sf3b2 "splicing factor 3b, subunit 2" species:10116
"Rattus norvegicus" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] RGD:1307159 GO:GO:0071013 GO:GO:0005689 EMBL:CH473953
IPI:IPI00952297 UniGene:Rn.103341 Ensembl:ENSRNOT00000067303
UCSC:RGD:1307159 Uniprot:D4A9C1
Length = 138
Score = 194 (73.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 52/130 (40%), Positives = 78/130 (60%)
Query: 446 VETPDVIDLRKQQRKEP----ERP-LYQVLEEKEERIAPGTLLGTTHTYVVNTGTQDKAG 500
+ETP++I+LRK++ +E E P L+ VL EK G ++G+TH Y ++T K
Sbjct: 1 METPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGP 60
Query: 501 AKRVDLLRGQKTDRVDVTLQPEELEVMDNVLPAKYEEAREEEKLRSQREDFSDMVAEN-- 558
A L+G V+V L PEELE+ + KYEE E++ + ++EDFSDMVAE+
Sbjct: 61 APE---LQG-----VEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAA 112
Query: 559 -EKKRKRKMQ 567
+K++KRK Q
Sbjct: 113 KQKQKKRKAQ 122
>UNIPROTKB|E1BSG7 [details] [associations]
symbol:WBP11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0050699 "WW
domain binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0008599 "protein
phosphatase type 1 regulator activity" evidence=IEA]
InterPro:IPR019007 Pfam:PF09429 GO:GO:0005737 GO:GO:0008380
GO:GO:0016607 GO:GO:0008599 GeneTree:ENSGT00670000097795
OMA:DMSSTSE EMBL:AADN02006002 EMBL:AADN02006003 IPI:IPI00582001
Ensembl:ENSGALT00000019185 Uniprot:E1BSG7
Length = 554
Score = 116 (45.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 49/184 (26%), Positives = 83/184 (45%)
Query: 221 KQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKY 280
+QP QL + + +K+R+ + E +L +K+ + ++ K++++Y+
Sbjct: 69 QQP-QLNEKVLKDKRKKLRETF---ERILRLYEKENPDIYKELRKLEVEYE--------- 115
Query: 281 QTKPKLTSHGDLYHEGKEFEVK---LREMKPGILSHDLKEALGMPDGAPPPWLINMQRYG 337
Q + +L+ + D + EV+ L +M P S+ L + + +P PP L YG
Sbjct: 116 QKRAQLSQYFDAVKNAQHVEVESIPLPDM-PHAPSNILIQDIPLPGAQPPSILKKTSAYG 174
Query: 338 PPP-SYPHLKIPGLNAP-IPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGIHQQEQPNYE 395
PP S L PGL P +PPG PG PP + + +YG G + P
Sbjct: 175 PPVRSISMLPPPGLGVPRLPPGRK---PPGPPPGPPPPQVLQ-MYGRKVGFALEMAPRRR 230
Query: 396 EEPV 399
EE V
Sbjct: 231 EEDV 234
Score = 59 (25.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 512 TDRVDVTLQPEELEVMDNVLPAKYEEAREEEKL-RSQREDFSDMVAENEKKRKRKMQE 568
+DR D + EE DN K E EE+K S R F+DM ++ KK+K M+E
Sbjct: 276 SDRSDADSEGEEFPRRDN---DKEREGGEEKKSGHSVR--FADMPGKSRKKKKN-MKE 327
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 534 KYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQE 568
+Y E EEE+ S+ ED S + ++ + + E
Sbjct: 352 EYSEEEEEEEEDSESEDASQQQQQQQQHSEEALAE 386
>UNIPROTKB|Q95KQ6 [details] [associations]
symbol:BCL9 "B-cell CLL/lymphoma 9 protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0014908 "myotube
differentiation involved in skeletal muscle regeneration"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005634 GO:GO:0005737
GO:GO:0045944 GO:GO:0035019 GO:GO:0060070 HOGENOM:HOG000060118
InterPro:IPR015668 PANTHER:PTHR15185 GO:GO:0014908 EMBL:AJ416471
STRING:Q95KQ6 eggNOG:NOG318771 OrthoDB:EOG44TP9F
ArrayExpress:Q95KQ6 Uniprot:Q95KQ6
Length = 130
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00068
Identities = 25/76 (32%), Positives = 34/76 (44%)
Query: 306 MKPGILSHDLKEALGMPDGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIP---PGASFGY 362
M PG++SH+ +G PP ++ R G P +P ++ P P P P G
Sbjct: 31 MGPGLMSHN--PIMGHGSQEPP--MVPQGRMGFPQGFPPVQSPPQQVPFPHNGPSGGQGN 86
Query: 363 HPGGWGKPPVDEYGRP 378
PGG G P GRP
Sbjct: 87 FPGGMGFPGEGPLGRP 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.134 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 580 487 0.00081 119 3 11 23 0.47 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 610 (65 KB)
Total size of DFA: 278 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.88u 0.18s 51.06t Elapsed: 00:00:02
Total cpu time: 50.89u 0.18s 51.07t Elapsed: 00:00:02
Start: Sat May 11 16:08:32 2013 End: Sat May 11 16:08:34 2013