Query 008038
Match_columns 580
No_of_seqs 181 out of 1575
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:38:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008038.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008038hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-105 4E-110 880.6 60.2 550 29-579 1-550 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.6E-97 5E-102 808.9 51.7 486 28-572 64-566 (580)
3 1zpu_A Iron transport multicop 100.0 3.9E-94 1.3E-98 783.3 53.2 478 30-572 1-505 (534)
4 3t6v_A Laccase; beta barrel, o 100.0 5.5E-93 1.9E-97 765.1 52.3 469 32-571 5-492 (495)
5 3pxl_A Laccase; 4-copper prote 100.0 4.8E-93 1.6E-97 765.5 51.7 467 32-572 4-493 (499)
6 1v10_A Laccase; multicopper bl 100.0 3.9E-92 1.3E-96 766.8 48.7 475 27-573 19-514 (521)
7 2q9o_A Laccase-1; multicopper 100.0 1.2E-91 4E-96 768.5 52.3 482 27-572 29-545 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 5.5E-90 1.9E-94 747.4 48.0 462 33-572 6-492 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2.4E-83 8.2E-88 685.0 41.4 404 27-553 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.3E-82 4.3E-87 680.1 31.6 403 31-558 18-445 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 4.4E-80 1.5E-84 671.4 41.6 434 30-572 35-496 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 7.3E-79 2.5E-83 650.9 41.4 409 27-553 46-480 (481)
13 2wsd_A Spore coat protein A; o 100.0 2.7E-78 9.3E-83 657.3 42.6 425 30-554 24-510 (513)
14 3aw5_A Multicopper oxidase; be 100.0 7.8E-79 2.7E-83 649.8 32.2 389 31-552 20-447 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 1.6E-76 5.6E-81 661.3 43.0 444 28-555 29-592 (612)
16 2g23_A PHS, phenoxazinone synt 100.0 9.3E-76 3.2E-80 641.7 44.0 456 28-566 29-603 (612)
17 3od3_A Blue copper oxidase CUE 100.0 8.4E-77 2.9E-81 634.5 33.5 412 30-552 16-488 (488)
18 3g5w_A Multicopper oxidase typ 100.0 1.5E-53 5.2E-58 434.7 29.6 269 30-331 1-278 (318)
19 2zwn_A Two-domain type laccase 100.0 1E-51 3.4E-56 425.9 33.5 268 30-330 2-278 (339)
20 2r7e_A Coagulation factor VIII 100.0 3.3E-53 1.1E-57 475.5 15.7 226 47-314 63-316 (742)
21 2j5w_A Ceruloplasmin, ferroxid 100.0 2.6E-50 8.9E-55 470.0 30.6 453 25-552 15-559 (1065)
22 2dv6_A Nitrite reductase; elec 100.0 2.7E-49 9.1E-54 424.6 26.5 396 27-554 24-433 (447)
23 1kbv_A ANIA, major outer membr 100.0 6.3E-49 2.2E-53 403.0 21.5 268 27-330 34-308 (327)
24 3gdc_A Multicopper oxidase; be 100.0 2.5E-47 8.6E-52 384.2 27.1 238 28-313 31-274 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 9.7E-48 3.3E-52 448.3 19.9 389 48-555 616-1059(1065)
26 3cg8_A Laccase; oxidoreductase 100.0 2.6E-45 9E-50 377.5 23.7 134 27-171 44-197 (343)
27 2zoo_A Probable nitrite reduct 100.0 4.5E-45 1.5E-49 390.9 24.7 269 27-331 24-299 (442)
28 1mzy_A Copper-containing nitri 100.0 6.7E-44 2.3E-48 367.4 26.1 269 26-329 27-318 (333)
29 1oe1_A Dissimilatory copper-co 100.0 7.7E-44 2.6E-48 367.6 24.7 270 27-330 28-319 (336)
30 3kw8_A Laccase, putative coppe 100.0 9.9E-44 3.4E-48 355.8 22.6 239 26-328 2-264 (276)
31 2bw4_A Copper-containing nitri 100.0 1.3E-43 4.5E-48 366.4 22.2 270 27-330 34-325 (340)
32 3t9w_A Small laccase, multi-co 100.0 1.5E-43 5.2E-48 357.8 20.4 240 26-329 24-287 (299)
33 3tas_A Small laccase, multi-co 100.0 4.9E-43 1.7E-47 356.8 21.0 239 26-328 8-270 (313)
34 1sdd_A Coagulation factor V; c 100.0 1.1E-41 3.7E-46 346.1 9.8 215 50-314 49-287 (306)
35 2dv6_A Nitrite reductase; elec 100.0 1.8E-38 6.2E-43 340.4 29.4 266 28-330 160-434 (447)
36 1sdd_B Coagulation factor V; c 100.0 3.2E-39 1.1E-43 360.6 24.5 262 28-328 3-326 (647)
37 2r7e_B Coagulation factor VIII 100.0 1.2E-39 4.2E-44 366.0 14.0 252 27-312 129-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 2.8E-36 9.5E-41 338.4 5.7 217 58-314 448-698 (742)
39 3gdc_A Multicopper oxidase; be 100.0 6E-30 2.1E-34 257.4 13.4 218 233-553 66-287 (288)
40 2zwn_A Two-domain type laccase 100.0 8.1E-29 2.8E-33 255.0 16.7 219 233-553 35-276 (339)
41 3g5w_A Multicopper oxidase typ 100.0 4.9E-29 1.7E-33 253.8 13.1 220 233-552 34-274 (318)
42 3t9w_A Small laccase, multi-co 100.0 3.5E-28 1.2E-32 245.4 13.1 217 230-556 55-289 (299)
43 3kw8_A Laccase, putative coppe 99.9 6.5E-28 2.2E-32 241.0 14.1 215 231-555 34-266 (276)
44 3tas_A Small laccase, multi-co 99.9 8.2E-27 2.8E-31 237.2 18.8 214 231-554 40-271 (313)
45 1sdd_A Coagulation factor V; c 99.9 1.1E-25 3.7E-30 228.3 1.3 227 233-554 60-300 (306)
46 1sdd_B Coagulation factor V; c 99.9 7.1E-23 2.4E-27 228.6 16.7 241 230-553 66-326 (647)
47 1kbv_A ANIA, major outer membr 99.9 1.7E-21 5.9E-26 199.3 17.2 235 233-554 70-307 (327)
48 2bw4_A Copper-containing nitri 99.9 6.2E-21 2.1E-25 196.6 18.9 241 233-554 71-324 (340)
49 2r7e_B Coagulation factor VIII 99.9 4.4E-23 1.5E-27 231.8 2.5 224 229-552 195-454 (770)
50 1mzy_A Copper-containing nitri 99.8 5.1E-20 1.7E-24 189.1 19.2 90 448-554 227-318 (333)
51 2zoo_A Probable nitrite reduct 99.8 4.9E-19 1.7E-23 189.0 17.2 235 233-554 60-297 (442)
52 1oe1_A Dissimilatory copper-co 99.8 5.3E-18 1.8E-22 174.4 19.8 221 233-554 65-318 (336)
53 2uxt_A Protein SUFI, SUFI; oxi 99.7 7.1E-16 2.4E-20 164.4 22.8 252 31-328 152-440 (451)
54 2xu9_A Laccase; oxidoreductase 99.7 1.5E-15 5E-20 161.6 23.6 245 31-313 146-426 (439)
55 1hfu_A Laccase 1; oxidoreducta 99.6 1.4E-14 4.9E-19 156.5 19.8 286 33-328 143-469 (503)
56 1v10_A Laccase; multicopper bl 99.6 2.3E-14 7.9E-19 155.4 21.1 281 33-328 164-490 (521)
57 3cvb_A Plastocyanin; cupredoxi 99.6 1.2E-15 4.1E-20 129.1 4.0 88 58-151 15-105 (105)
58 3zx1_A Oxidoreductase, putativ 99.5 3.8E-13 1.3E-17 143.6 23.2 245 32-313 181-467 (481)
59 3t6v_A Laccase; beta barrel, o 99.5 3.2E-13 1.1E-17 145.0 20.8 256 50-313 168-457 (495)
60 1zpu_A Iron transport multicop 99.5 2.8E-12 9.7E-17 139.2 24.8 255 50-313 167-467 (534)
61 3pxl_A Laccase; 4-copper prote 99.5 3.8E-13 1.3E-17 144.5 17.1 255 50-313 166-457 (499)
62 3od3_A Blue copper oxidase CUE 99.5 8.5E-13 2.9E-17 140.8 18.3 255 32-313 151-476 (488)
63 1aoz_A Ascorbate oxidase; oxid 99.5 1.9E-12 6.4E-17 141.6 20.4 244 63-313 205-511 (552)
64 2cal_A Rusticyanin; iron respi 99.4 3.2E-13 1.1E-17 121.8 11.1 100 46-150 46-154 (154)
65 3aw5_A Multicopper oxidase; be 99.4 1.6E-12 5.5E-17 138.2 18.3 231 32-313 138-435 (448)
66 2q9o_A Laccase-1; multicopper 99.4 1.6E-11 5.5E-16 134.2 24.4 251 50-313 195-507 (559)
67 1iby_A Nitrosocyanin; RED copp 99.4 7.8E-13 2.7E-17 113.0 10.1 105 32-151 2-112 (112)
68 3cg8_A Laccase; oxidoreductase 99.4 1.8E-12 6E-17 133.0 12.1 99 53-154 198-309 (343)
69 3abg_A Bilirubin oxidase; clea 99.4 9.1E-12 3.1E-16 135.0 17.7 262 32-328 172-474 (534)
70 2g23_A PHS, phenoxazinone synt 99.4 2.8E-11 9.5E-16 132.5 20.7 247 50-328 254-590 (612)
71 1fwx_A Nitrous oxide reductase 99.3 5E-12 1.7E-16 136.4 11.2 95 46-153 497-594 (595)
72 2wsd_A Spore coat protein A; o 99.3 2.8E-11 9.7E-16 131.0 15.8 231 50-328 230-509 (513)
73 3sqr_A Laccase; multicopper ox 99.2 9.8E-10 3.3E-14 119.5 22.5 249 50-313 225-530 (580)
74 2ov0_A Amicyanin; beta-sandwic 99.1 1.8E-10 6.3E-15 96.9 9.8 79 56-150 27-105 (105)
75 3cvb_A Plastocyanin; cupredoxi 99.1 1.1E-10 3.6E-15 98.4 6.5 84 447-553 20-104 (105)
76 3gyr_A PHS, phenoxazinone synt 99.1 9.5E-09 3.2E-13 114.0 22.0 79 234-314 473-578 (612)
77 2aan_A Auracyanin A; cupredoxi 99.0 2.5E-10 8.6E-15 101.3 6.9 93 448-552 37-138 (139)
78 2gim_A Plastocyanin; beta shee 99.0 6.1E-10 2.1E-14 93.8 8.7 83 61-151 19-106 (106)
79 2aan_A Auracyanin A; cupredoxi 99.0 1.6E-09 5.6E-14 96.0 10.0 91 58-150 31-139 (139)
80 4hci_A Cupredoxin 1; structura 98.9 7.5E-09 2.6E-13 86.1 9.4 79 56-150 22-100 (100)
81 2gim_A Plastocyanin; beta shee 98.8 9.7E-09 3.3E-13 86.4 7.7 84 447-553 21-105 (106)
82 2plt_A Plastocyanin; electron 98.8 8.3E-09 2.8E-13 85.5 6.6 78 61-150 17-98 (98)
83 1qhq_A Protein (auracyanin); e 98.8 4.8E-08 1.6E-12 86.6 11.9 93 58-151 29-140 (140)
84 1pcs_A Plastocyanin; electron 98.7 4.2E-08 1.4E-12 81.1 8.3 81 61-150 18-98 (98)
85 1bxv_A Plastocyanin; copper pr 98.7 3.8E-08 1.3E-12 80.2 7.5 75 60-150 17-91 (91)
86 1qhq_A Protein (auracyanin); e 98.7 4.6E-08 1.6E-12 86.7 8.1 95 448-553 35-139 (140)
87 1b3i_A PETE protein, protein ( 98.6 5E-08 1.7E-12 80.5 6.7 78 61-150 18-97 (97)
88 1kdj_A Plastocyanin; electron 98.6 9.3E-08 3.2E-12 79.7 8.2 80 61-150 16-102 (102)
89 3erx_A Pseudoazurin; copper pr 98.6 2.1E-07 7E-12 80.1 10.1 76 61-152 20-95 (123)
90 1pcs_A Plastocyanin; electron 98.6 4.3E-08 1.5E-12 81.1 5.4 78 447-552 20-97 (98)
91 1byp_A Protein (plastocyanin); 98.6 1.7E-07 5.9E-12 77.6 8.5 78 61-150 16-99 (99)
92 1plc_A Plastocyanin; electron 98.6 1.8E-07 6.3E-12 77.4 8.4 78 61-150 16-99 (99)
93 3tu6_A Pseudoazurin (blue copp 98.5 3.1E-07 1E-11 79.4 9.9 77 61-153 22-98 (127)
94 2plt_A Plastocyanin; electron 98.5 1.8E-07 6.1E-12 77.3 7.5 79 447-552 19-97 (98)
95 3ef4_A Pseudoazurin, blue copp 98.5 5E-07 1.7E-11 77.6 10.4 76 61-152 21-96 (124)
96 1b3i_A PETE protein, protein ( 98.4 1.3E-07 4.6E-12 77.9 4.3 76 448-552 21-96 (97)
97 1bxv_A Plastocyanin; copper pr 98.4 5.8E-07 2E-11 73.0 7.9 71 447-552 20-90 (91)
98 3c75_A Amicyanin; copper prote 98.4 1.1E-06 3.8E-11 76.7 9.2 79 56-150 54-132 (132)
99 1byp_A Protein (plastocyanin); 98.3 9.9E-07 3.4E-11 72.9 7.4 81 447-552 18-98 (99)
100 1cuo_A Protein (azurin ISO-2); 98.3 4.3E-06 1.5E-10 72.4 11.5 92 58-151 14-129 (129)
101 1iby_A Nitrosocyanin; RED copp 98.3 2.3E-06 7.7E-11 72.5 8.8 72 448-553 40-111 (112)
102 1iuz_A Plastocyanin; electron 98.3 2.9E-06 9.7E-11 70.0 8.9 80 59-150 15-98 (98)
103 1paz_A Pseudoazurin precursor; 98.3 2.5E-06 8.5E-11 73.4 8.7 76 61-152 20-95 (123)
104 3ay2_A Lipid modified azurin p 98.2 6.5E-06 2.2E-10 74.2 11.1 92 58-151 54-167 (167)
105 4hci_A Cupredoxin 1; structura 98.2 3.6E-06 1.2E-10 69.7 8.4 70 448-552 30-99 (100)
106 1pmy_A Pseudoazurin; electron 98.2 2.8E-06 9.7E-11 73.0 7.9 77 61-153 20-96 (123)
107 1kdj_A Plastocyanin; electron 98.2 1.2E-06 4.2E-11 72.8 5.1 83 447-552 18-101 (102)
108 2ccw_A Azurin II, AZN-2; elect 98.1 1.9E-05 6.4E-10 68.4 10.5 91 58-150 14-128 (129)
109 1id2_A Amicyanin; beta barrel, 98.1 1.3E-05 4.5E-10 67.0 9.2 77 58-150 30-106 (106)
110 3sbq_A Nitrous-oxide reductase 98.1 1.7E-05 5.8E-10 83.9 11.3 88 52-152 548-638 (638)
111 2iaa_C Azurin; quinoprotein, t 98.1 2.4E-05 8.2E-10 67.5 10.4 91 58-150 13-127 (128)
112 1nwp_A Azurin; electron transp 98.0 2.3E-05 7.7E-10 67.7 10.1 91 58-150 14-128 (128)
113 1plc_A Plastocyanin; electron 98.0 1.3E-05 4.3E-10 66.2 7.5 81 447-552 18-98 (99)
114 2cal_A Rusticyanin; iron respi 97.9 2.4E-05 8.4E-10 70.0 8.3 80 447-552 62-153 (154)
115 2ov0_A Amicyanin; beta-sandwic 97.9 3.8E-05 1.3E-09 64.0 7.9 71 447-552 34-104 (105)
116 2ux6_A Pseudoazurin; type-1 co 97.8 3.8E-05 1.3E-09 65.8 7.4 75 61-153 20-94 (122)
117 1fwx_A Nitrous oxide reductase 97.6 0.00012 4.1E-09 79.1 9.6 76 447-554 514-592 (595)
118 3fsa_A Azurin; copper, cupredo 97.5 0.0006 2E-08 57.9 10.1 86 58-150 14-125 (125)
119 1iuz_A Plastocyanin; electron 97.1 0.0017 5.7E-08 53.1 8.2 79 447-552 19-97 (98)
120 2cua_A Protein (CUA); CUA cent 97.0 0.0031 1.1E-07 54.8 9.6 73 62-151 60-135 (135)
121 1id2_A Amicyanin; beta barrel, 97.0 0.0019 6.6E-08 53.6 7.9 71 447-552 35-105 (106)
122 3ef4_A Pseudoazurin, blue copp 97.0 0.0014 4.7E-08 56.0 6.9 72 448-554 24-95 (124)
123 3erx_A Pseudoazurin; copper pr 97.0 0.0021 7.3E-08 54.8 7.9 72 448-554 23-94 (123)
124 3s8f_B Cytochrome C oxidase su 96.9 0.0055 1.9E-07 55.1 10.1 76 61-151 92-168 (168)
125 3c75_A Amicyanin; copper prote 96.9 0.0027 9.3E-08 55.0 7.9 71 447-552 61-131 (132)
126 3tu6_A Pseudoazurin (blue copp 96.8 0.0017 5.9E-08 55.7 6.3 73 447-554 24-96 (127)
127 3ay2_A Lipid modified azurin p 96.2 0.01 3.5E-07 53.3 7.2 95 448-553 60-166 (167)
128 1cuo_A Protein (azurin ISO-2); 95.9 0.031 1.1E-06 47.9 8.8 95 448-553 20-128 (129)
129 1paz_A Pseudoazurin precursor; 95.9 0.021 7.3E-07 48.6 7.6 36 515-554 59-94 (123)
130 1pmy_A Pseudoazurin; electron 95.6 0.025 8.6E-07 48.1 7.0 37 514-554 58-94 (123)
131 2cua_A Protein (CUA); CUA cent 95.6 0.046 1.6E-06 47.3 8.7 69 448-552 62-133 (135)
132 3fsa_A Azurin; copper, cupredo 95.3 0.076 2.6E-06 45.0 8.6 93 448-552 20-124 (125)
133 3sbq_A Nitrous-oxide reductase 95.2 0.071 2.4E-06 56.7 9.9 78 447-554 559-637 (638)
134 2ccw_A Azurin II, AZN-2; elect 94.9 0.1 3.6E-06 44.6 8.7 95 448-553 20-128 (129)
135 2iaa_C Azurin; quinoprotein, t 94.8 0.082 2.8E-06 45.2 7.6 95 448-553 19-127 (128)
136 1nwp_A Azurin; electron transp 94.5 0.11 3.8E-06 44.4 7.8 96 448-552 20-127 (128)
137 2ux6_A Pseudoazurin; type-1 co 94.3 0.11 3.7E-06 44.0 7.3 71 447-554 22-92 (122)
138 3s8f_B Cytochrome C oxidase su 93.2 0.37 1.3E-05 43.1 9.1 71 448-552 95-166 (168)
139 3isy_A Bsupi, intracellular pr 89.7 5.2 0.00018 33.4 11.8 75 239-314 16-104 (120)
140 1cyx_A CYOA; electron transpor 86.1 2.4 8.3E-05 38.9 8.2 74 62-150 41-115 (205)
141 2gsm_B Cytochrome C oxidase su 76.9 8.3 0.00028 37.0 8.6 76 62-152 171-247 (262)
142 3hb3_B Cytochrome C oxidase su 76.9 8.7 0.0003 37.5 8.8 76 62-152 189-265 (298)
143 1cyx_A CYOA; electron transpor 71.7 21 0.0007 32.7 9.4 60 234-313 42-101 (205)
144 3isy_A Bsupi, intracellular pr 64.5 60 0.002 26.9 10.1 75 48-134 20-100 (120)
145 1v54_B Cytochrome C oxidase po 64.3 19 0.00064 33.6 7.8 74 62-151 140-215 (227)
146 3idu_A Uncharacterized protein 56.4 87 0.003 26.1 10.5 70 236-314 28-99 (127)
147 3hb3_B Cytochrome C oxidase su 54.6 25 0.00087 34.2 7.0 72 447-552 190-262 (298)
148 1fft_B Ubiquinol oxidase; elec 50.3 20 0.00067 35.3 5.5 74 62-150 151-225 (315)
149 2r39_A FIXG-related protein; s 48.2 44 0.0015 27.4 6.7 46 242-297 34-81 (118)
150 1x9u_A Umecyanin; cupredoxin, 45.9 20 0.00069 29.6 4.1 40 119-158 72-112 (116)
151 2gsm_B Cytochrome C oxidase su 44.1 45 0.0015 31.8 6.8 71 447-551 172-243 (262)
152 2c34_A ICP, inhibitor of cyste 40.3 1.1E+02 0.0037 25.0 7.9 68 61-129 14-89 (116)
153 1v54_B Cytochrome C oxidase po 40.1 43 0.0015 31.1 5.9 71 447-551 141-212 (227)
154 3kmh_A D-lyxose isomerase; cup 34.1 85 0.0029 29.2 6.7 56 233-293 129-184 (246)
155 1ws8_A Mavicyanin; oxidized fo 34.1 29 0.00098 28.2 3.2 35 119-153 72-106 (109)
156 1fft_B Ubiquinol oxidase; elec 33.3 59 0.002 31.8 5.9 71 448-552 153-224 (315)
157 1nep_A EPV20, BNPC2, epididyma 31.6 1E+02 0.0034 25.7 6.4 68 54-123 19-94 (130)
158 2cio_B Inhibitor of cysteine p 30.4 1.6E+02 0.0055 24.2 7.3 66 61-129 12-93 (121)
159 1jer_A Cucumber stellacyanin; 28.9 57 0.0019 27.7 4.3 35 120-154 76-111 (138)
160 2x3c_A Toxic extracellular end 27.6 1.6E+02 0.0055 29.1 8.1 69 242-311 39-127 (343)
161 2h7w_A Chagasin; beta-strands, 27.5 2.3E+02 0.0078 23.7 7.8 65 61-129 32-104 (131)
162 2f1e_A Protein APAG; APAG prot 27.5 62 0.0021 27.1 4.2 46 73-120 34-85 (127)
163 2p9r_A Alpha-2-M, alpha-2-macr 27.4 1.5E+02 0.0051 23.1 6.5 69 237-311 13-84 (102)
164 1xwv_A DER F II; beta sheets, 27.3 1.1E+02 0.0037 25.5 5.8 68 54-123 17-92 (129)
165 2wtp_A ORF131 protein, CZCE; m 25.9 33 0.0011 28.8 2.2 18 234-251 72-89 (131)
166 1xvs_A Protein APAG; MCSG APC2 24.9 63 0.0022 27.0 3.8 47 73-121 33-85 (126)
167 1xq4_A Protein APAG; all beta 23.0 80 0.0027 26.9 4.1 46 73-120 38-89 (139)
168 2hj1_A Hypothetical protein; s 22.4 41 0.0014 26.7 2.0 24 51-74 59-82 (97)
169 2wgn_B Inhibitor of cysteine p 22.1 2.7E+02 0.0092 23.2 7.3 73 54-129 27-105 (132)
170 2cbp_A Cucumber basic protein; 20.7 96 0.0033 24.4 4.0 29 120-149 67-95 (96)
171 1xvs_A Protein APAG; MCSG APC2 20.5 82 0.0028 26.3 3.7 53 242-297 31-87 (126)
172 1tza_A APAG protein, SOR45; st 20.3 74 0.0025 26.9 3.3 46 73-120 33-84 (134)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.1e-105 Score=880.56 Aligned_cols=550 Identities=72% Similarity=1.296 Sum_probs=441.6
Q ss_pred CceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
+++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|+++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 47899999999999999999999999999999999999999999999999943499999999999999899999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCCC
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRP 188 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~ 188 (580)
|+|+||++|+|+|+++++||||||||.+.|+.+||+|+|||++++....|+.+|+|++|+++||++.+..++...+...+
T Consensus 81 ~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (552)
T 1aoz_A 81 CAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKP 160 (552)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSS
T ss_pred CCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999998766667888999999999999998776665444433
Q ss_pred CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEE
Q 008038 189 LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268 (580)
Q Consensus 189 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~vi 268 (580)
..+.+.++.++|||+..++|+....+.. ....|+...+.....+.++|++||+|||||||+|..+.+.|+|+||+|+||
T Consensus 161 ~~~~~~~~~~liNG~~~~~c~~~~~~~~-~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 161 IRWIGEPQTILLNGRGQFDCSIAAKYDS-NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp CCCCCSCSEEEETTBCCSSSBTTGGGCT-TSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred ccCCCCCCeEEECCccccCcccCccccc-ccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 3334568899999999999876432211 223455222233345589999999999999999999999999999999999
Q ss_pred EECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCC
Q 008038 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDD 348 (580)
Q Consensus 269 a~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~ 348 (580)
|+||.+++|+.++++.|+|||||||+|++++.++|+|||++.......+.....|+|+|.+......+....|..|.+++
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~ 319 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD 319 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999999543678999999876532345677899999865432222333344454444
Q ss_pred CCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCC
Q 008038 349 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 428 (580)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~ 428 (580)
......+............++...++++.+....+..++...|+|||++|..|..|.|.+.+.++.+.|+.+.++..+..
T Consensus 320 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~ 399 (552)
T 1aoz_A 320 FDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPE 399 (552)
T ss_dssp HHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCT
T ss_pred ccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCcccccc
Confidence 32221111111111011223445688888877655455677899999999999999999988888777765544433322
Q ss_pred CcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCc
Q 008038 429 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 508 (580)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~ 508 (580)
.++......+...+.++.++.++.|++|+|+|+|.+.+..+....||||||||+|+||+++.|.|++.+...+|+.+|.|
T Consensus 400 ~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~ 479 (552)
T 1aoz_A 400 DYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPL 479 (552)
T ss_dssp TCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCE
T ss_pred ccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCc
Confidence 23322222223445677889999999999999998754111133799999999999999998999875566789999999
Q ss_pred cceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCCCccccccCCCCcCCCCCCC
Q 008038 509 KNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQ 579 (580)
Q Consensus 509 rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~~~ 579 (580)
|||+.|++++|++|||+|||||.|+|||||++|++.|||++|.|++++++++|++++.||.++.-+++++-
T Consensus 480 RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~ 550 (552)
T 1aoz_A 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPK 550 (552)
T ss_dssp ESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCS
T ss_pred cCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCchhhccCCcchhhhhccCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999876666543
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.6e-97 Score=808.95 Aligned_cols=486 Identities=30% Similarity=0.498 Sum_probs=387.9
Q ss_pred CCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCc
Q 008038 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
.+++++|+|++++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|+++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 46789999999999999999999999999999999999999999999999995448999999999999999999999999
Q ss_pred cccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcce-EEEEeecccCchHHHHhhhcC
Q 008038 108 QCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSS 186 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~~~d~~~~~~~~~~~~~~~ 186 (580)
||+|+||++|+|+|++.++||||||||.+.|+.+||+|+|||+++.+ ..||.|. +|+++||+++...++......
T Consensus 144 q~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~ 219 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTARL 219 (580)
T ss_dssp BCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHTT
T ss_pred cCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998653 3588887 999999999988777655443
Q ss_pred CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeE
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMV 266 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~ 266 (580)
.+ ...++.++|||++.++|+...+ ..|. .....+.+++++|++|||||||+|....+.|+|+||+|+
T Consensus 220 ~~---~~~~d~~liNG~~~~~c~~~~~------~~~~----~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~ 286 (580)
T 3sqr_A 220 GA---PPALENTLMNGTNTFDCSASTD------PNCV----GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLT 286 (580)
T ss_dssp SC---CCCBSEEEETTBCCCCCTTCCC------TTBC----CCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEE
T ss_pred cC---CCCCceEEECCcccCCCccccc------cccc----cCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEE
Confidence 22 4578999999999987764211 2343 123456899999999999999999999999999999999
Q ss_pred EEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC---CCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 267 VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 267 via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
|||+||.+++|+.++++.|++||||||+|++++ ++|+|||++.....|. ......|||+|.++... . |..
T Consensus 287 VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~-~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~-~-----P~~ 359 (580)
T 3sqr_A 287 VIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA-N-----PTS 359 (580)
T ss_dssp EEEETTEEEEEEEESSEEECTTCEEEEEEECCS-CSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC-C-----CCC
T ss_pred EEEeCCccCCceEeeEEEEccceEEEEEEEeCC-CCCeEEEEEecccccCccCCCCceEEEEEECCCCCC-C-----CCC
Confidence 999999999999999999999999999999997 5789999998766553 22357899999854321 1 112
Q ss_pred CCCCCCCccccc-cccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccC-CCCCcchhhhccCCccCCCCC
Q 008038 344 PRWDDYDHSKSF-SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNG 421 (580)
Q Consensus 344 p~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~f~~~~ 421 (580)
+.+.......+. ...+.+..+ ...+...+.++.+... .++...|+|||.+|.. +..|.|.+...+ ...|
T Consensus 360 ~~~~~~~~~~~~~~~~L~P~~~-~~~~~~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g-~~~~---- 430 (580)
T 3sqr_A 360 VGTTPRGTCEDEPVASLVPHLA-LDVGGYSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNN-ETIF---- 430 (580)
T ss_dssp CCCCCCCCSCCSCGGGCCBSSC-CBCCSEEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTT-CCCC----
T ss_pred CCCCccchhhcccccccccCCC-CCCCCccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcC-CccC----
Confidence 222222111111 012222211 1122233444444432 2456799999999975 588888766532 1111
Q ss_pred CCCCCCCCcccCCCCCCCCccCCceeEEc----cCCcEEEEEEEcCC--CCCCCCCCCCCeeecCCCeEEEeecCCCCCc
Q 008038 422 PPENFSNEYDVMKPPVNANTTLGSGVYML----GLNTTVDVILQNAN--AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK 495 (580)
Q Consensus 422 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~G~~v~~~l~N~~--~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~ 495 (580)
..+ ..++.+ +.|++|+|+|+|.+ .. .||||||||+|+||+++.|.|++
T Consensus 431 -----~~~---------------~~~~~~~~~~~~~~~VeiVi~n~~~~~~------~HP~HLHGh~F~vv~~g~G~f~~ 484 (580)
T 3sqr_A 431 -----PTE---------------YNVVALEQTNANEEWVVYVIEDLTGFGI------WHPIHLHGHDFFIVAQETDVFNS 484 (580)
T ss_dssp -----CGG---------------GCEEEECC----CCEEEEEEEECSSSCC------CEEEEESSCCEEEEEEESSCCCT
T ss_pred -----CCC---------------cceeecccccCCCcEEEEEEeCCCcccc------ceeeEecCceEEEEecCCCccCc
Confidence 101 112444 46999999999987 44 89999999999999999999987
Q ss_pred -ccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCC---Cccc-cccCCC
Q 008038 496 -EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI---PNQA-LACGLT 570 (580)
Q Consensus 496 -~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~---p~~~-~~c~~~ 570 (580)
.++..+|+.||++|||+.|++++|++|||++||||.|+|||||++|++.||+++|.|+++++++. |+.. ..|..|
T Consensus 485 ~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 485 DESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANW 564 (580)
T ss_dssp TTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHH
T ss_pred cccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHH
Confidence 34578999999999999999999999999999999999999999999999999999999988663 4443 689877
Q ss_pred Cc
Q 008038 571 GK 572 (580)
Q Consensus 571 ~~ 572 (580)
..
T Consensus 565 ~~ 566 (580)
T 3sqr_A 565 NA 566 (580)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-94 Score=783.32 Aligned_cols=478 Identities=30% Similarity=0.489 Sum_probs=378.1
Q ss_pred ceEEEEEEEEEEEeCCCC-ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 30 KTRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
++++|+|+|++..+++|| .++.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|+++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999943499999999999998899999999999
Q ss_pred ccCCCCCeEEEEEEcC-CCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCC
Q 008038 109 CPINPGETYLYRFKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR 187 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~ 187 (580)
|+|+||++|+|+|++. ++||||||||...|+.+||+|+|||+++.+ |+.||+|++|+++||+++...++...+...
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 157 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYDYDEELSLSLSEWYHDLVTDLTKSFMSV 157 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSCCSEEEEEEEEEECSSCHHHHHHHHSST
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCCCcceEEEEeeccccCCHHHHHHHHhcc
Confidence 9999999999999995 999999999999999999999999999753 567899999999999999887765443221
Q ss_pred --CCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeee
Q 008038 188 --PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265 (580)
Q Consensus 188 --~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~ 265 (580)
.......++.+||||+..+ .++|++||+|||||||+|..+.+.|+|+||+|
T Consensus 158 ~~~~g~~~~~d~~liNG~~~~---------------------------~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~ 210 (534)
T 1zpu_A 158 YNPTGAEPIPQNLIVNNTMNL---------------------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEM 210 (534)
T ss_dssp TCTTCCCCCCSEEEETTBSSC---------------------------EEECCSSCEEEEEEEECCSSCCEEEEETTBCE
T ss_pred ccCCCCCCCCceEEECCCCce---------------------------EEEEECCCEEEEEEEeccCCceEEEEEcCCee
Confidence 1111346899999999765 79999999999999999999999999999999
Q ss_pred EEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCC----C--CCCCceEEEEecCCCCCCCCCCC
Q 008038 266 VVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK----P--ATPPALTLLNYHPTSASKIPLSP 339 (580)
Q Consensus 266 ~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~----~--~~~~~~ail~y~~~~~~~~~~~~ 339 (580)
+|||+||.+++|+.++++.|+|||||||+|++++.+.++|||++.....+ + ......++|+|.+......+
T Consensus 211 ~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~--- 287 (534)
T 1zpu_A 211 TVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQ--- 287 (534)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCC---
T ss_pred EEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCC---
Confidence 99999999999999999999999999999999875568999998765332 1 23455799999854321111
Q ss_pred CCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeee-cCCeEEEEEcceeccCCCCCcchhhhccCCccCC
Q 008038 340 PPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 418 (580)
Q Consensus 340 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 418 (580)
+....+.. ...+. .+..... ...+..+++++.+...... .++...|.|||++|..|..|.|.+.... +.+.
T Consensus 288 -~~~~~~~~--~~~~~--~l~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~ 359 (534)
T 1zpu_A 288 -NYVDSIDN--FLDDF--YLQPYEK-EAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA 359 (534)
T ss_dssp -CCCSCSSC--SCCGG--GCCBSSC-CCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT
T ss_pred -Cccccccc--ccccc--cceeCCC-CCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc
Confidence 00111111 01111 1111111 1222356788877765432 3455689999999999999988766421 1110
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC-------
Q 008038 419 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG------- 491 (580)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g------- 491 (580)
.. + .. ...++.++.++.|++|+|+|+|.+.+ .||||||||+|+||+++.+
T Consensus 360 ~~--~-------~~--------~~~~~~~~~~~~g~~v~ivi~N~~~~------~HP~HLHGh~F~Vl~~~~~~~~~~~G 416 (534)
T 1zpu_A 360 NN--S-------EI--------YGSNTHTFILEKDEIVEIVLNNQDTG------THPFHLHGHAFQTIQRDRTYDDALGE 416 (534)
T ss_dssp TC--G-------GG--------GCSSSCEEEECTTCEEEEEEEECSSS------CEEEEETTCCEEEEEECCCCCGGGTC
T ss_pred CC--C-------cc--------cCCCceEEEeCCCCEEEEEEeCCCCC------CCCeEecCCceEEEeecCCccccccC
Confidence 00 0 00 11124568899999999999998877 8999999999999999764
Q ss_pred ---CCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccC-----CCcc
Q 008038 492 ---KFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN-----IPNQ 563 (580)
Q Consensus 492 ---~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~-----~p~~ 563 (580)
.|++.+.. ....+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||++|.+.++++++ +|+.
T Consensus 417 ~p~~~~~~~~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~ 495 (534)
T 1zpu_A 417 VPHSFDPDNHP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSEN 495 (534)
T ss_dssp CCCCCBTTBCC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHH
T ss_pred cccccCccccc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChh
Confidence 34432111 22468999999999999999999999999999999999999999999999998876643 4544
Q ss_pred c-cccCCCCc
Q 008038 564 A-LACGLTGK 572 (580)
Q Consensus 564 ~-~~c~~~~~ 572 (580)
. +.|..+..
T Consensus 496 ~~~~C~~~~~ 505 (534)
T 1zpu_A 496 HLEVCQSCSV 505 (534)
T ss_dssp HHHHHHHTTC
T ss_pred HhhhhhccCC
Confidence 4 78887754
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=5.5e-93 Score=765.09 Aligned_cols=469 Identities=29% Similarity=0.490 Sum_probs=367.5
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC----CceeeeeccccccCCCCCCCCCCCc
Q 008038 32 RHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT----EGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~----~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|.. .+++|||||+++.+++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 469999999999999999999999999999999999999999999999543 4799999999999889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCC-CCCCCCC-cceEEEEeecccCchHHHHhhh
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~-~~p~~~d-~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+. ..++.+| .|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999 89999999999999999999999999987542 1224443 568999999999876432
Q ss_pred cCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCee
Q 008038 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~ 264 (580)
.. ..+..++.++|||++...|.- .....+.++|++|++|||||||+|..+.+.|+|+||+
T Consensus 161 --~~-~~p~~~d~~liNG~g~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~ 220 (495)
T 3t6v_A 161 --GA-GGAITADSTLIDGLGRTHVNV-----------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHD 220 (495)
T ss_dssp --CS-SSCCCCSEEEETTBCCBSSSC-----------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCC
T ss_pred --cc-CCCCCCcEEEECCcCcCCCCc-----------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCe
Confidence 11 114478999999998763311 0123458999999999999999999999999999999
Q ss_pred eEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC--CCCceEEEEecCCCCCCCCCCCCCC
Q 008038 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 265 ~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
|+|||+||.+++|+.++++.|+|||||||+|++++ +.|+|||++.....+.. .....|+|+|.+..... +....+.
T Consensus 221 ~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~~~~ 298 (495)
T 3t6v_A 221 MTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAILRYDGATTAD-PVTVAST 298 (495)
T ss_dssp EEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCCCCS
T ss_pred EEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEECCCCCCC-CCCCCCC
Confidence 99999999999999999999999999999999987 56899999987544322 22357999998543221 1111110
Q ss_pred CCCCCCCCccccccccccccCCC--C--CCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCC
Q 008038 343 TPRWDDYDHSKSFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 418 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 418 (580)
. ......+ ..+.+.... + ..+..+++++.+....+ . ..|+|||++|..|..|.|.+...+. +.
T Consensus 299 ~----~~~~~~~--~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~--~--~~w~iNg~s~~~~~~P~L~~~~~g~---~~ 365 (495)
T 3t6v_A 299 V----HTKCLIE--TDLHPLSRNGVPGNPHQGGADCNLNLSLGFA--C--GNFVINGVSFTPPTVPVLLQICSGA---NT 365 (495)
T ss_dssp S----CSSBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEEE--T--TEEEETTBCCCCCSSCHHHHHHTTC---CS
T ss_pred C----Ccccccc--ccccccccccCCCccCCCCCcEEEEEEEEec--C--cEEEEcCEecCCCCCcchhhhhcCC---cC
Confidence 0 0111111 112222111 1 11234577776655432 1 2799999999999989887765321 10
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEE-cCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCccc
Q 008038 419 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ-NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 497 (580)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~-N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~ 497 (580)
.. .......++.++.|++|+|+|+ |...+ .||||||||+|+|++.++
T Consensus 366 ~~-------------------~~~~~~~v~~~~~g~~V~ivl~~n~~~~------~HP~HLHGh~F~vl~~~g------- 413 (495)
T 3t6v_A 366 AA-------------------DLLPSGSVISLPSNSTIEIALPAGAAGG------PHPFHLHGHDFAVSESAS------- 413 (495)
T ss_dssp ST-------------------TSSSTTSEEEECTTCEEEEEEECCSSSC------CCEEEETTCCEEEEECTT-------
T ss_pred cc-------------------cccCCcceEEecCCCEEEEEEccCCCCC------CcceeecCCcEEEEecCC-------
Confidence 00 0112334789999999999998 55555 899999999999998642
Q ss_pred ccccCCCCCCccceEEeCC-CcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccC---CCccc-cccCCCC
Q 008038 498 EKKFNLKNPPLKNTAVIFP-YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQA-LACGLTG 571 (580)
Q Consensus 498 ~~~~~~~~p~~rDTv~vpp-~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~p~~~-~~c~~~~ 571 (580)
...+|+.+|.+|||+.|++ |+|++|||++||||.|+|||||++|++.||+++|.|+++++++ +|+.. ..|..|.
T Consensus 414 ~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 414 NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhhHhh
Confidence 2357888999999999997 8999999999999999999999999999999999999987753 56554 6897664
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=4.8e-93 Score=765.46 Aligned_cols=467 Identities=29% Similarity=0.544 Sum_probs=367.9
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC----CceeeeeccccccCCCCCCCCCCCc
Q 008038 32 RHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT----EGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~----~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|.. ++++|||||+++.+++|+||++++|
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 469999999999999999999999999999999999999999999999543 4799999999999889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCC-CCCCCC-cceEEEEeecccCchHHHHhhh
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEK-EPFHYD-GEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~-~p~~~d-~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+.. .++.+| .|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999 899999999999999999999999999875411 223443 56799999999976532
Q ss_pred cCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCee
Q 008038 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~ 264 (580)
.+ ..+..++.++|||++..+|.. ....+.++|++|++|||||||+|..+.+.|+|+||+
T Consensus 159 --~~-~~p~~~d~~liNG~~~~~~~~------------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~ 217 (499)
T 3pxl_A 159 --GP-RFPGGADATLINGKGRAPSDS------------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHN 217 (499)
T ss_dssp --SC-SSCSSCSEEEETTBCCCTTCT------------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBC
T ss_pred --cc-CCCCCCcEEEECCCCcCCCCC------------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCe
Confidence 11 113478999999998764321 223468999999999999999999999999999999
Q ss_pred eEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC--CCCceEEEEecCCCCCCCCCCCCCC
Q 008038 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 265 ~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
|+|||+||.+++|+.++++.|+|||||||+|++++ +.|+|||++.....+.. .....|+|+|.+..... +...
T Consensus 218 ~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~--- 292 (499)
T 3pxl_A 218 LTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE-PTTN--- 292 (499)
T ss_dssp EEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCC---
T ss_pred EEEEEECCcccCceEeeeEEECCCcEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEeCCCCCCC-CCCC---
Confidence 99999999999999999999999999999999987 56899999986544322 22457999998653221 1111
Q ss_pred CCCCCCCCccccccccccccCCC--C--CCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCC
Q 008038 343 TPRWDDYDHSKSFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 418 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 418 (580)
.........+ ..+.+.... + ..+..+++++.+....+ + ..|+|||++|..|..|.|.+...+. +.
T Consensus 293 --~~~~~~~~~~--~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~---~~ 361 (499)
T 3pxl_A 293 --QTTSVKPLNE--VDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---G-SNFFINGASFVPPTVPVLLQILSGA---QT 361 (499)
T ss_dssp --CCCCSSBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTC---CS
T ss_pred --CCCCCccccc--ccccccccccCCCcccCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCchhhhhhcCC---cc
Confidence 1111111111 112222111 1 11234577776665432 2 2799999999999999887765321 10
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEE---cCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc
Q 008038 419 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ---NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK 495 (580)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~---N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~ 495 (580)
.. .......++.++.|++|+|+|+ |.+.+ .||||||||+|+|++.++
T Consensus 362 ~~-------------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~------~HP~HLHGh~F~Vl~~~g----- 411 (499)
T 3pxl_A 362 AQ-------------------DLLPSGSVYVLPSNASIEISFPATAAAPGA------PHPFHLHGHTFAVVRSAG----- 411 (499)
T ss_dssp TT-------------------TSSSTTSEEEECTTCEEEEEEECCTTSCSC------SCEEEETTCCEEEEECTT-----
T ss_pred cc-------------------ccCCCceeEEecCCCEEEEEEecCcccCCC------CccceecCCcEEEEeccC-----
Confidence 00 0112334789999999999999 44444 899999999999998632
Q ss_pred ccccccCCCCCCccceEEeCC---CcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccC---CCccc-cccC
Q 008038 496 EDEKKFNLKNPPLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQA-LACG 568 (580)
Q Consensus 496 ~~~~~~~~~~p~~rDTv~vpp---~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~p~~~-~~c~ 568 (580)
...+|+.+|.+|||+.|++ |+|++|||++||||.|+|||||++|++.||+++|.|+++++++ +|+.. ..|.
T Consensus 412 --~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~ 489 (499)
T 3pxl_A 412 --STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCP 489 (499)
T ss_dssp --CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHHH
T ss_pred --CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhhh
Confidence 2357888999999999997 9999999999999999999999999999999999999998853 56554 7898
Q ss_pred CCCc
Q 008038 569 LTGK 572 (580)
Q Consensus 569 ~~~~ 572 (580)
.|..
T Consensus 490 ~~~~ 493 (499)
T 3pxl_A 490 TYDA 493 (499)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 7754
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=3.9e-92 Score=766.81 Aligned_cols=475 Identities=28% Similarity=0.482 Sum_probs=366.7
Q ss_pred cCCceEEEEEEEEEEEeCCCCc-eeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC-----CceeeeeccccccCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCK-ESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT-----EGVVIHWHGIRQLGTPWA 100 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~-----~~~siH~HG~~~~~~~~~ 100 (580)
..+...+|+|++++..+++||+ ++.+|+|||++|||+||+++||+|+|+|+|+ ++ ++++|||||+++.+++|+
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~-l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQ-LTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEEC-CCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEEC-CCCccCCCCceEecCCeeccCCCcc
Confidence 4566778999999999999999 9999999999999999999999999999999 55 999999999999888999
Q ss_pred CCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCC---cceEEEEeecccCc
Q 008038 101 DGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD---GEFNLLLSDWWHRS 176 (580)
Q Consensus 101 DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d---~e~~l~~~d~~~~~ 176 (580)
||+|+++||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+ ..+..|| +|++|+++||+++.
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~D~~~~~ 176 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND-PHLSLYDVDDASTVITIADWYHSL 176 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSGGGEEEEEEECSSC
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcc-cccccCCCCCceeEEEEcccccCC
Confidence 99999999999999999999995 8999999999999999999999999998753 2233343 69999999999987
Q ss_pred hHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeE
Q 008038 177 VHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASL 256 (580)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~ 256 (580)
..++... .... ...++.++|||+....|.. .....+.++|++|++|||||||+|..+.+
T Consensus 177 ~~~~~~~---~~~~-~~~~d~~liNG~~~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliNa~~~~~~ 235 (521)
T 1v10_A 177 STVLFPN---PNKA-PPAPDTTLINGLGRNSANP-----------------SAGQLAVVSVQSGKRYRFRIVSTSCFPNY 235 (521)
T ss_dssp CC----------CC-CSCCSEEEETTBCCCSSCG-----------------GGSCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred HHHHhhc---cCCC-CCCCCEEEECCcccCCCCC-----------------CCCCceEEEECCCCEEEEEEEecCCcccE
Confidence 6554321 1111 3468999999998865431 11233589999999999999999999999
Q ss_pred EEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC--CCCceEEEEecCCCCCC
Q 008038 257 NLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASK 334 (580)
Q Consensus 257 ~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~--~~~~~ail~y~~~~~~~ 334 (580)
.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.....+.. .....++|+|.+.....
T Consensus 236 ~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~-~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~ 314 (521)
T 1v10_A 236 AFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAE 314 (521)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCC
T ss_pred EEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCC-CCCceeeeeccccccccCCCCceeEEEEECCCCCCC
Confidence 9999999999999999999999999999999999999999987 56899999987543221 12336999998644321
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCC--CCC--CCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhh
Q 008038 335 IPLSPPPITPRWDDYDHSKSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 410 (580)
Q Consensus 335 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~--~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~ 410 (580)
+.... . ......+ ..+..... .+. .+...++++.+.... .+....|+|||++|..+..|.|.+..
T Consensus 315 -p~~~~-----~-~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~ 383 (521)
T 1v10_A 315 -PTTSQ-----N-SGTALNE--ANLIPLINPGAPGNPVPGGADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQIL 383 (521)
T ss_dssp -CCCCC-----C-CSCBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHH
T ss_pred -CCCCC-----C-cccccch--hhcccCCcccCCCcccCCcceEEEEEEEec--CCceeEEEECCCcccCCCCchhhhhh
Confidence 11110 0 0000011 11111111 111 111334454443221 12224799999999988888777664
Q ss_pred ccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecC
Q 008038 411 YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGE 490 (580)
Q Consensus 411 ~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~ 490 (580)
.+. +. +. ....++.++.++.|++|+|+++| .+ .||||||||+|+|++++.
T Consensus 384 ~g~---~~----~~---------------~~~~~~~~~~v~~g~~vei~l~N--~~------~HP~HLHGh~F~Vl~~~~ 433 (521)
T 1v10_A 384 SGV---TN----PN---------------DLLPGGAVISLPANQVIEISIPG--GG------NHPFHLHGHNFDVVRTPG 433 (521)
T ss_dssp HTC---CC----GG---------------GSSSTTTEEEECTTCEEEEEEEC--CB------SCEEEESSCCEEEEECTT
T ss_pred cCC---cc----cc---------------cCCCCceEEEecCCCEEEEEEcC--CC------CCCEEEccceEEEEecCC
Confidence 221 10 00 01123456899999999999999 45 899999999999999865
Q ss_pred CCCCcccccccCCCCCCccceEEe-CCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccccccc---CCCc-ccc
Q 008038 491 GKFTKEDEKKFNLKNPPLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPN-QAL 565 (580)
Q Consensus 491 g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~---~~p~-~~~ 565 (580)
+. .+|+.+|.||||+.| ++++|++|||++||||.|+|||||++|++.|||++|.|++++++ .+|+ ..+
T Consensus 434 ~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~ 506 (521)
T 1v10_A 434 SS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDD 506 (521)
T ss_dssp CS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHT
T ss_pred CC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhh
Confidence 42 357789999999999 89999999999999999999999999999999999999988764 3554 468
Q ss_pred ccCCCCcC
Q 008038 566 ACGLTGKR 573 (580)
Q Consensus 566 ~c~~~~~~ 573 (580)
.|..|+.-
T Consensus 507 ~C~~~~~~ 514 (521)
T 1v10_A 507 LCPKYNAN 514 (521)
T ss_dssp HHHHHTTC
T ss_pred hchhhhcc
Confidence 99988763
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.2e-91 Score=768.54 Aligned_cols=482 Identities=27% Similarity=0.454 Sum_probs=376.3
Q ss_pred cCCceEEEEEEEEEEE--eCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMF--WSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT 103 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~ 103 (580)
..+++++|+|++++.. +.+||+. +.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4677899999999998 8999999 999999999999999999999999999999547899999999999888999999
Q ss_pred CCCccccCCC-CCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcce-EEEEeecccCchHHHH
Q 008038 104 ASISQCPINP-GETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQE 181 (580)
Q Consensus 104 ~~~~q~~i~p-G~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~~~d~~~~~~~~~~ 181 (580)
|+++||+|+| |++|+|+|++.++||||||||.+.|+.+||+|+|||+++.. ..||+|. +|+++||++....++.
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~~~ 184 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADDLV 184 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHH
T ss_pred CccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHHHh
Confidence 9999999999 99999999999999999999999999999999999998653 3578887 9999999999877665
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEe
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVK 261 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~ 261 (580)
.... ... ...++.++|||+..+.|.. ....+.+++++||+|||||||+|..+.+.|+|+
T Consensus 185 ~~~~--~~~-~~~~d~~liNG~~~~~~~~------------------~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~ 243 (559)
T 2q9o_A 185 HFTQ--NNA-PPFSDNVLINGTAVNPNTG------------------EGQYANVTLTPGKRHRLRILNTSTENHFQVSLV 243 (559)
T ss_dssp HHHT--TSC-CCCBSEEEETTBCBCTTTC------------------CBCCCEEEECTTCEEEEEEEECCSSCCEEEEET
T ss_pred hhhh--cCC-CCccceeEECCccccCcCC------------------CCCceEEEEcCCCEEEEEEEecCCCceEEEEEC
Confidence 3322 111 3468999999999875532 112458999999999999999999999999999
Q ss_pred CeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee--cCCCC--CCCCceEEEEecCCCCCCCCC
Q 008038 262 NHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV--RGRKP--ATPPALTLLNYHPTSASKIPL 337 (580)
Q Consensus 262 gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~--~~~~~--~~~~~~ail~y~~~~~~~~~~ 337 (580)
||+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.. ...+. ......++|+|.+.... .|.
T Consensus 244 gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~-~P~ 321 (559)
T 2q9o_A 244 NHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG-LPT 321 (559)
T ss_dssp TBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS-CCC
T ss_pred CCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCC-CCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC-CCC
Confidence 99999999999999999999999999999999999987 57899999986 33332 23456899999854321 111
Q ss_pred CCCCCCCCCCCCCccccccccccccCCC--CCC--CCCcceEEEEEeeeeecCCeEEEEEcceeccCC-CCCcchhhhcc
Q 008038 338 SPPPITPRWDDYDHSKSFSNKIFALMGS--PKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLP-PTPYLGSIKYG 412 (580)
Q Consensus 338 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~--~~~--p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p-~~p~l~~~~~~ 412 (580)
... .+. .+...... ..+.+..+. +.+ ....++++.+.... ...+...|+|||++|..+ ..|.|.....+
T Consensus 322 ~~~--~~~-~~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g 395 (559)
T 2q9o_A 322 DEG--TPP-VDHQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTG 395 (559)
T ss_dssp CCC--CCC-CCCTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHT
T ss_pred CCC--CcC-CCcccccc--cccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcC
Confidence 110 000 01000000 111111110 111 11123444443321 123456899999999765 67776665432
Q ss_pred CCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEcc-CCcEEEEEEEcCC----CCCCCCCCCCCeeecCCCeEEEe
Q 008038 413 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLG-LNTTVDVILQNAN----AIRPNLSEIHPWHLHGHDFWVLG 487 (580)
Q Consensus 413 ~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~l~N~~----~~~~~~~~~HP~HlHG~~F~vv~ 487 (580)
.. .|. .+..++.++ .+++++|+++|.+ .+ .||||||||+|+||+
T Consensus 396 ~~-~~~------------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~------~HP~HLHGh~F~Vl~ 444 (559)
T 2q9o_A 396 NT-SYP------------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSL------PHPMHLHGHDFLVLG 444 (559)
T ss_dssp CC-CCC------------------------GGGCEEEECCSSCEEEEEEEECTTSSCCC------CEEEEESSSCEEEEE
T ss_pred Cc-cCC------------------------CCceEEEcCCCCEEEEEEEeCCCccccCC------CCcEEECCCceEEEe
Confidence 11 110 112245554 5688889999965 45 899999999999999
Q ss_pred ecC---------CCCCc-ccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccc
Q 008038 488 RGE---------GKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 557 (580)
Q Consensus 488 ~~~---------g~~~~-~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~ 557 (580)
++. |.|++ .+...+|+.+|.|||||.|++++|++|||++||||.|||||||++|++.|||++|.|+++++
T Consensus 445 ~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~ 524 (559)
T 2q9o_A 445 RSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADL 524 (559)
T ss_dssp ESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHH
T ss_pred cccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchh
Confidence 987 77765 23466889999999999999999999999999999999999999999999999999998877
Q ss_pred cCC-----Cc-cccccCCCCc
Q 008038 558 GNI-----PN-QALACGLTGK 572 (580)
Q Consensus 558 ~~~-----p~-~~~~c~~~~~ 572 (580)
+++ |+ ..+.|+.|+.
T Consensus 525 ~~~~~~~~p~~~~~~C~~~~~ 545 (559)
T 2q9o_A 525 RQRISQEDEDDFNRVCDEWRA 545 (559)
T ss_dssp GGGCCHHHHHHHHHHHHHHHH
T ss_pred hhccccCCchhhhhhcccccc
Confidence 653 33 3589998876
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=5.5e-90 Score=747.39 Aligned_cols=462 Identities=30% Similarity=0.563 Sum_probs=361.8
Q ss_pred EEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC-----CceeeeeccccccCCCCCCCCCCCc
Q 008038 33 HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT-----EGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~-----~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
.|+|++++..+++||.++.+|+|||++ ||+||+++||+|+|+|+|+ ++ ++++|||||+++.+++++||+|+++
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~-l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVND-LDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEEC-CCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeC-CCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 599999999999999999999999999 9999999999999999999 45 9999999999998889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCC---cceEEEEeecccCchHHHHhh
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD---GEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d---~e~~l~~~d~~~~~~~~~~~~ 183 (580)
||+|+||++|+|+|++ +++||||||||...|+.+||+|+|||+++.+ ..+..|| +|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~-- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADWYHIPAPSIQ-- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSTTSEEEEEEECSSCGGGCC--
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCC-CcccCCCCCCceEEEEEcccccCChHHhc--
Confidence 9999999999999995 8999999999999999999999999998754 2233343 6899999999998765421
Q ss_pred hcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe
Q 008038 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263 (580)
Q Consensus 184 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh 263 (580)
. ...++.++|||+....|.. ....+.++|++|++|||||||+|..+.+.|+|+||
T Consensus 161 ----~---~~~~d~~liNG~~~~~~~~------------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh 215 (503)
T 1hfu_A 161 ----G---AAQPDATLINGKGRYVGGP------------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGH 215 (503)
T ss_dssp ----------CCSEEEETTBCCBTTCC------------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTC
T ss_pred ----C---CCCCCEEEECcccccCCCC------------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCc
Confidence 1 1357999999999875532 22346899999999999999999999999999999
Q ss_pred eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC------CCCCceEEEEecCCCCCCCCC
Q 008038 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPL 337 (580)
Q Consensus 264 ~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~ 337 (580)
+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.....+. ......++|+|.+.....+..
T Consensus 216 ~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~ 294 (503)
T 1hfu_A 216 ELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT 294 (503)
T ss_dssp CEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC
T ss_pred eEEEEeccCccccccccCeEEEcccceEEEEEEcCC-CccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC
Confidence 999999999999999999999999999999999987 5689999998653221 112346999998643321111
Q ss_pred CCCCCCCCCCCCCccccccccccccCC--CCC--CCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccC
Q 008038 338 SPPPITPRWDDYDHSKSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGL 413 (580)
Q Consensus 338 ~~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~--~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~ 413 (580)
.. .|....+. . ..+..... .+. .+...++++.+.... ++. .|+|||++|..+..|.|.+...+
T Consensus 295 ~~---~~~~~~l~---~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~g- 361 (503)
T 1hfu_A 295 SA---NPNPAQLN---E--ADLHALIDPAAPGIPTPGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMSG- 361 (503)
T ss_dssp CC---CSSCCBCC---G--GGCBBSSSCSCSSCSSTTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHTT-
T ss_pred CC---CCccCCCc---c--ccccccCccCCCCcccCCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhcC-
Confidence 11 11111111 0 11111111 111 111334444433221 122 79999999999888887766422
Q ss_pred CccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEc-CCCCCCCCCCCCCeeecCCCeEEEeecCCC
Q 008038 414 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN-ANAIRPNLSEIHPWHLHGHDFWVLGRGEGK 492 (580)
Q Consensus 414 ~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N-~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~ 492 (580)
.+. +. ....++.++.++.|++|+++++| .+.+ .||||||||+|+|++++.+.
T Consensus 362 --~~~----~~---------------~~~~~~~~~~v~~g~~vei~l~~n~~~~------~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 362 --AQS----AN---------------DLLPAGSVYELPRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp --CCS----GG---------------GSSSTTSEEEECSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC
T ss_pred --Ccc----cc---------------cCCCCceEEEccCCCEEEEEEECCCCCC------CCCEEEecceEEEEecCCCC
Confidence 110 00 11234457999999999999994 5555 89999999999999986542
Q ss_pred CCcccccccCCCCCCccceEEe-CCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccccccc---CCCc-ccccc
Q 008038 493 FTKEDEKKFNLKNPPLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPN-QALAC 567 (580)
Q Consensus 493 ~~~~~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~---~~p~-~~~~c 567 (580)
.+|+.+|.||||+.| ++++|++|||++||||.|+|||||++|++.|||++|.+++++++ .+|+ ..+.|
T Consensus 415 -------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 415 -------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLC 487 (503)
T ss_dssp -------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHH
T ss_pred -------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhc
Confidence 357788999999999 99999999999999999999999999999999999999887664 3454 46899
Q ss_pred CCCCc
Q 008038 568 GLTGK 572 (580)
Q Consensus 568 ~~~~~ 572 (580)
+.|..
T Consensus 488 ~~~~~ 492 (503)
T 1hfu_A 488 EIYDD 492 (503)
T ss_dssp HHHHT
T ss_pred cchhh
Confidence 88764
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.4e-83 Score=684.98 Aligned_cols=404 Identities=27% Similarity=0.387 Sum_probs=323.9
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
+.+.+++|+|++++..++++|.++.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~~-- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENR-LPEPTNLHWHGLPIS--PKVDDPF-- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEEC-SSSCBCCEEETCCCC--TTTSCTT--
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEEC-CCCCcceEeCCCCCC--ccccCCc--
Confidence 45678999999999999999999999999999999999999999999999999 689999999999986 5999985
Q ss_pred ccccCCCCCeEEEEEEc--CCCcceeeecCc----chhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHH
Q 008038 107 SQCPINPGETYLYRFKV--DKAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQ 180 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~--~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~ 180 (580)
+.|+||++|+|+|++ +++||||||||. +.|+.+||+|+|||+++.+......+++|++|+++||+++... .
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~-~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR-P 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE-E
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC-c
Confidence 469999999999998 489999999995 5799999999999998754222245688999999999987631 0
Q ss_pred HhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE
Q 008038 181 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 260 (580)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i 260 (580)
. ............++.++|||+..+ .++|++| +|||||||+|..+.+.|+|
T Consensus 164 ~-~~~~~~~~~g~~~~~~~iNG~~~p---------------------------~l~v~~g-~~RlRliN~~~~~~~~~~i 214 (439)
T 2xu9_A 164 A-PHTPMDWMNGKEGDLVLVNGALRP---------------------------TLVAQKA-TLRLRLLNASNARYYRLAL 214 (439)
T ss_dssp C-CCCHHHHHHCCCCSEEEETTEESC---------------------------EEECSSS-EEEEEEEECCSSCCEEEEE
T ss_pred C-CCCccccccCCCCCEEEECCccCC---------------------------cEEecCC-eEEEEEEecCCCceEEEEE
Confidence 0 000000000125789999999876 7999999 9999999999999999999
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC-----------------CCCCce
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-----------------ATPPAL 322 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~-----------------~~~~~~ 322 (580)
+||+|+|||.||+++ +|+.++++.|+|||||||+|++++ +|+|+|++.....+. ......
T Consensus 215 ~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~--~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (439)
T 2xu9_A 215 QDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK--EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETL 292 (439)
T ss_dssp TTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS--SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEE
T ss_pred CCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC--CceEEEEecccccCCccccccccccccccCCCCCccee
Confidence 999999999999998 899999999999999999999987 789999997544321 112456
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCC
Q 008038 323 TLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPP 402 (580)
Q Consensus 323 ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~ 402 (580)
++++|.+.... .+ +|.. +....+.. .+ ..+|++.+.... . + ..|.|||++|..+.
T Consensus 293 ~~l~~~~~~~~----~~---~p~~------------l~~~~~l~-~~-~~~r~~~l~~~~--~-g-~~~~iNg~~~~~~~ 347 (439)
T 2xu9_A 293 LYLIAPKNPKP----LP---LPKA------------LSPFPTLP-AP-VVTRRLVLTEDM--M-A-ARFFINGQVFDHRR 347 (439)
T ss_dssp EEEEECSSCCC----CC---CCSC------------CCCCCCCC-CC-SEEEEEEEEEEG--G-G-TEEEETTBCCCTTC
T ss_pred EEEEecCCCcc----cc---Cccc------------CCCcccCC-CC-CcceEEEEEeec--c-C-ceEeECCEECCCCC
Confidence 78888753211 11 1110 00000001 11 224677666542 1 1 37999999874321
Q ss_pred CCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCC
Q 008038 403 TPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 482 (580)
Q Consensus 403 ~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~ 482 (580)
++ ..++.|++++|+|+|.+.+ .||||||||+
T Consensus 348 -------------------~~------------------------~~~~~g~~~~~~~~N~~~~------~HP~HLHG~~ 378 (439)
T 2xu9_A 348 -------------------VD------------------------LKGQAQTVEVWEVENQGDM------DHPFHLHVHP 378 (439)
T ss_dssp -------------------CC------------------------EEECTTCEEEEEEEECSSS------CEEEEESSCC
T ss_pred -------------------Cc------------------------eecCCCCEEEEEEEcCCCC------CCCceeCCCc
Confidence 11 6788999999999998877 8999999999
Q ss_pred eEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 483 FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 483 F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+|++++.+.+ .+|.||||+.|+|+++++|||++||||.|+|||||++|++.|||++|.++
T Consensus 379 F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 379 FQVLSVGGRPF----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp BEEEEETTEEC----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEeeCCCCC----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999865433 36899999999999999999999999999999999999999999999874
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.3e-82 Score=680.13 Aligned_cols=403 Identities=19% Similarity=0.215 Sum_probs=318.7
Q ss_pred eEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 31 TRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++.+ .+||+| ||
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~~--~~DG~~---~~ 91 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNR-LTENVSMTVAGLQVPG--PLMGGP---AR 91 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEEC-SSSCBCEEEETCCCCG--GGSCSG---GG
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEEC-CCCCccEEECCccCCC--CCCCCC---cC
Confidence 578999999999987 8999999999999999999999999999999999 6899999999999975 499998 99
Q ss_pred cCCCCCeEEEEEEcC-CCcceeeecCc----chhhccccEEEEEEEcCCCCCC--CCCC-CcceEEEEeecccCchHHHH
Q 008038 110 PINPGETYLYRFKVD-KAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~-~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~--p~~~-d~e~~l~~~d~~~~~~~~~~ 181 (580)
+|+||++|+|+|++. ++||||||||. +.|+.+||+|+|||+++.+... |..| ++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 999999999999996 59999999997 7899999999999998765322 3344 78999999999997654432
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE-
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV- 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i- 260 (580)
... .... ...++.++|||+..+ .+++++| +|||||||+|..+.+.|+|
T Consensus 172 ~~~--~~~~-~~~~d~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~ 220 (451)
T 2uxt_A 172 YNE--PGSG-GFVGDTLLVNGVQSP---------------------------YVEVSRG-WVRLRLLNASNSRRYQLQMN 220 (451)
T ss_dssp CCC--CSSS-CCCCSEEEETTEESC---------------------------EEEECSS-EEEEEEEECCSSCCEEEEET
T ss_pred ccc--ccCC-CCcCCEEEECCcccc---------------------------eEEecCC-EEEEEEEccCCceeEEEEEC
Confidence 211 1111 346899999999877 7999999 9999999999999999999
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----------CCCCceEEEEecC
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----------ATPPALTLLNYHP 329 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----------~~~~~~ail~y~~ 329 (580)
+||+|+|||+||.++ +|+.++++.|+|||||||+|++++ +++|+|++.....+. ......++++|..
T Consensus 221 dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 298 (451)
T 2uxt_A 221 DGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRP 298 (451)
T ss_dssp TSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEEC----------------CCCCSCCEEEEEEE
T ss_pred CCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEEecCccccccccccccccCCCCCCcceEEEEe
Confidence 899999999999988 899999999999999999999986 689999987543211 1233467888875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhh
Q 008038 330 TSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 409 (580)
Q Consensus 330 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~ 409 (580)
......... .+|. .+..... .+.+...++++.+. + .|+|||++|..+.
T Consensus 299 ~~~~~~~~~---~~p~------------~L~~~~~-~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~------- 346 (451)
T 2uxt_A 299 TGLLPLVTD---SLPM------------RLLPTEI-MAGSPIRSRDISLG-------D--DPGINGQLWDVNR------- 346 (451)
T ss_dssp CSCCC-------CCCS------------CSSSSCC-CCCCCSEEEEEEEC-------S--SSSBTTBCCCTTC-------
T ss_pred cCCCcCccc---cCcc------------ccCCCCC-CCCCCcceEEEEEe-------e--EEEECCEeCCCCC-------
Confidence 432211111 1111 0111111 11122234444432 1 5889998874321
Q ss_pred hccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeec
Q 008038 410 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489 (580)
Q Consensus 410 ~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~ 489 (580)
+ .+.++.|++|+|+|+|. + .||||||||+|+|++++
T Consensus 347 ------------~------------------------~~~~~~G~~~~~~l~N~--~------~HP~HLHGh~F~Vl~~~ 382 (451)
T 2uxt_A 347 ------------I------------------------DVTAQQGTWERWTVRAD--E------PQAFHIEGVMFQIRNVN 382 (451)
T ss_dssp ------------C------------------------CEEEETTCEEEEEEEEE--E------EEEEEETTCEEEEEEET
T ss_pred ------------C------------------------cEEcCCCCEEEEEEECC--C------CcCeEECCceEEEEeeC
Confidence 0 17789999999999997 4 79999999999999985
Q ss_pred CCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCcee----eEEeeecchhhhcccEEEEeccccccc
Q 008038 490 EGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGA----WAFHCHIEPHFHIGMGVVLALGVETVG 558 (580)
Q Consensus 490 ~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~----w~~HCHil~H~d~GM~~~~~~~~~~~~ 558 (580)
+. .+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|.+.+.++.
T Consensus 383 G~--------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~~ 445 (451)
T 2uxt_A 383 GA--------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPRS 445 (451)
T ss_dssp TB--------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC-
T ss_pred Cc--------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCccc
Confidence 32 234567899999999 999999999999888 999999999999999999999876654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.4e-80 Score=671.43 Aligned_cols=434 Identities=19% Similarity=0.213 Sum_probs=324.6
Q ss_pred ceEEEEEEEEEE--EeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCc
Q 008038 30 KTRHYKWEVEYM--FWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 30 ~~~~~~l~~~~~--~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
.+++|+|++++. .+.+||..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||++
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DG~~--- 108 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINN-AEAPNSVHLHGSFSR--AAFDGWA--- 108 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEEC-SSSCBCEEEETCCCC--TTTTTCS---
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEEC-CCCCceEEECCCcCC--CCCCCCC---
Confidence 457899999964 46799999999999999999999999999999999999 789999999999986 4799986
Q ss_pred cccCCCCCeEEEEEEcC-CCcceeeecCcc----hhhccccEEEEEEEcCCCCCCCCC--C-CcceEEEEeecccCchHH
Q 008038 108 QCPINPGETYLYRFKVD-KAGTYFYHGHLG----MQRSAGLYGSLIVDVADGEKEPFH--Y-DGEFNLLLSDWWHRSVHE 179 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~~p~~--~-d~e~~l~~~d~~~~~~~~ 179 (580)
||+|+||++|+|+|++. ++||||||||.. .|+.+||+|+|||+++.+...++. | ++|++|+++||+++...+
T Consensus 109 ~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~ 188 (534)
T 3abg_A 109 EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGN 188 (534)
T ss_dssp SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSC
T ss_pred CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCc
Confidence 89999999999999994 579999999964 578899999999999876443333 2 678999999999876543
Q ss_pred HHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 180 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
+... .+......++.++|||+.++ .+.+++ ++|||||||+|..+.+.|+
T Consensus 189 ~~~~---~~~~~~~~gd~~lvNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~l~ 237 (534)
T 3abg_A 189 LVTT---NGELNSFWGDVIHVNGQPWP---------------------------FKNVEP-RKYRFRFLDAAVSRSFGLY 237 (534)
T ss_dssp BCCC---TTCSSCCCCSEEEETTEESC---------------------------BCBCCS-SEEEEEEEECCSSCCEEEE
T ss_pred eecc---CCCCccccCceeccCCccCc---------------------------eEEecC-cEEEEEEEecCCcceEEEE
Confidence 3221 11111235789999999877 477877 5999999999999999999
Q ss_pred EeC-------eeeEEEEECCcc-cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC-CCC----CCCCceEEEE
Q 008038 260 VKN-------HKMVVVEADGNY-VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG-RKP----ATPPALTLLN 326 (580)
Q Consensus 260 i~g-------h~~~via~DG~~-v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~-~~~----~~~~~~ail~ 326 (580)
|++ |+|+|||+||.+ .+|+.++++.|+|||||||+|++++.++.+|+|++.... .+. ......++++
T Consensus 238 i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~ 317 (534)
T 3abg_A 238 FADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMR 317 (534)
T ss_dssp ECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEE
T ss_pred EecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEE
Confidence 987 999999999985 589999999999999999999998743446999874321 111 1224468899
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcc
Q 008038 327 YHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYL 406 (580)
Q Consensus 327 y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l 406 (580)
|....... .......|. .+.... .+.++...++++.+... ...|+|||++|..+..|.
T Consensus 318 ~~~~~~~~--~~~~~~~P~------------~L~~~~-~p~~~~~~~~~~~~~~~------~~~w~iNG~~f~~~~~p~- 375 (534)
T 3abg_A 318 FVVADDTT--QPDTSVVPA------------NLRDVP-FPSPTTNTPRQFRFGRT------GPTWTINGVAFADVQNRL- 375 (534)
T ss_dssp EECCCCSS--CSCCCCCCC------------CCCCCS-CCCCCCCCCEEEECSCC------CSTTCCCCBTTBCTTSCC-
T ss_pred EecCCCCc--CCCCCCCcc------------ccccCC-CCCCccccceEEEEecc------CceeEECCcccCCCCCcc-
Confidence 87433210 000001111 011100 01122234565554321 125899999885432221
Q ss_pred hhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCC-CCCCCCCCCCCeeecCCCeEE
Q 008038 407 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWV 485 (580)
Q Consensus 407 ~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~-~~~~~~~~~HP~HlHG~~F~v 485 (580)
...++.|++++|+|+|.+ .+ .||||||||+|+|
T Consensus 376 ----------------------------------------l~~v~~G~~~~w~i~N~~~~~------~HP~HLHG~~F~V 409 (534)
T 3abg_A 376 ----------------------------------------LANVPVGTVERWELINAGNGW------THPIHIHLVDFKV 409 (534)
T ss_dssp ----------------------------------------CCEECTTCEEEEEEEECSSSC------CCCEEESSCCEEE
T ss_pred ----------------------------------------eeeccCCCEEEEEEEcCCCCC------CcCEEECCeeEEE
Confidence 156789999999999976 35 8999999999999
Q ss_pred EeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE-ecCceeeEEeeecchhhhcccEEEEecccccccCCCc--
Q 008038 486 LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPN-- 562 (580)
Q Consensus 486 v~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~-- 562 (580)
++++.|.+.. ...++.+ .|||||.|+|+++++|||+ +||||.|||||||++|++.|||+.|.+...+-..+|+
T Consensus 410 l~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~ 485 (534)
T 3abg_A 410 ISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATV 485 (534)
T ss_dssp EEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSCCSSTTTTS
T ss_pred EEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEeccccCCCCcc
Confidence 9996554321 1234445 8999999999999999999 8999999999999999999999999876543111121
Q ss_pred -cccccCCCCc
Q 008038 563 -QALACGLTGK 572 (580)
Q Consensus 563 -~~~~c~~~~~ 572 (580)
..+.|..|+.
T Consensus 486 ~~~p~~~~w~~ 496 (534)
T 3abg_A 486 FVDPMEELWQA 496 (534)
T ss_dssp CSSSSSCCCSS
T ss_pred cCCCCCccccc
Confidence 1245666665
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.3e-79 Score=650.92 Aligned_cols=409 Identities=25% Similarity=0.381 Sum_probs=314.6
Q ss_pred cCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
+.+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DG~p- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNK-LKEATTIHWHGVPVP--PDQDGSP- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--GGGSCCT-
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeC-CCCCeeEEecCcccC--CccCCCc-
Confidence 5778899999999999995 7999999999999999999999999999999999 789999999999985 6899997
Q ss_pred CccccCCCCCeEEEEEEcCC--CcceeeecCc----chhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHH
Q 008038 106 ISQCPINPGETYLYRFKVDK--AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHE 179 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~--~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~ 179 (580)
||+|+||++|+|+|++.+ +||||||||. +.|+.+||+|+|||+++.+. ++.++.++ |+++||+++...+
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~--~~~~~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA--LSHLKEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT--TTTSEEEE-EEEEEECCBTTSC
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccc--ccCCCcee-EEEEEEeccCCCc
Confidence 899999999999999955 8999999995 68999999999999997653 34445565 9999999876433
Q ss_pred HHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 180 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
........... ...++.++|||+..+ .+++++|+ ||||||+|..+.+.|+
T Consensus 197 ~~~~~~~~~~~-g~~gd~~lvNG~~~p---------------------------~l~v~~g~--RlRliNa~~~~~~~l~ 246 (481)
T 3zx1_A 197 IPNNNLNDWLN-GREGEFVLINGQFKP---------------------------KIKLATNE--RIRIYNATAARYLNLR 246 (481)
T ss_dssp CCCCCHHHHHH-CCCCSEEEETTEESC---------------------------EEEEETTE--EEEEEECCSSCCEEEE
T ss_pred cccccchhhcc-CCcCCEEEECCccCc---------------------------eEEecCCC--EEEEEecCCCeEEEEE
Confidence 21000000000 225789999999876 79999998 9999999999999999
Q ss_pred EeCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCCCCCC
Q 008038 260 VKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASK 334 (580)
Q Consensus 260 i~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~~~~~ 334 (580)
|+||+|+|||+||.++ +|+.++++.|+|||||||+|++++ +++|.|.+....... .......++++......
T Consensus 247 i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 323 (481)
T 3zx1_A 247 IQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK--DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN- 323 (481)
T ss_dssp ETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS--CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-
T ss_pred ECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC--CcEEEEEEecccccCccccCCCCceeEEEEecCCCC-
Confidence 9999999999998766 899999999999999999999987 778988775433211 12233445554422110
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecC-----Ce--------EEEEEcceeccCC
Q 008038 335 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN-----GF--------TKWAINNVSLTLP 401 (580)
Q Consensus 335 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~-----~~--------~~~~iNg~~~~~p 401 (580)
. .+|. .+..... .+.+ ..+|++.|........ +. ..|+|||+.|..
T Consensus 324 ---~---~lP~------------~l~~~~~-~~~~-~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~- 382 (481)
T 3zx1_A 324 ---V---ELPK------------NLKIFKP-SEEP-KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL- 382 (481)
T ss_dssp ---C---CCCS------------CSCCCCC-CCCC-CEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-
T ss_pred ---c---cCCc------------cccCCCC-CCCC-CcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-
Confidence 1 1111 0000000 1111 2345555543211000 00 139999987621
Q ss_pred CCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCC
Q 008038 402 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 481 (580)
Q Consensus 402 ~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~ 481 (580)
+++. +.++.|++|+|+|.|.+.+ .|||||||+
T Consensus 383 ------------------~~~~------------------------~~~~~G~~v~w~l~N~~~~------~Hp~HlHG~ 414 (481)
T 3zx1_A 383 ------------------KRID------------------------LSSKLGVVEDWIVINKSHM------DHPFHIHGT 414 (481)
T ss_dssp ------------------TCCC------------------------EEEETTCCEEEEEEECSSS------CEEEEETTC
T ss_pred ------------------CCce------------------------EEeCCCCEEEEEEEcCCCC------ceeEEEecc
Confidence 1111 7889999999999998877 999999999
Q ss_pred CeEEEeec-CCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 482 DFWVLGRG-EGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 482 ~F~vv~~~-~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
.|+|+++. .|. .....++.|||||.|+|+++++|+|+|||||.|||||||++|+|.|||+.|.|.
T Consensus 415 ~F~vl~~~~~g~-------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 415 QFELISSKLNGK-------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp CEEEEEEEETTE-------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EEEEEEecccCC-------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 99999983 121 111235789999999999999999999999999999999999999999999874
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.7e-78 Score=657.29 Aligned_cols=425 Identities=20% Similarity=0.271 Sum_probs=316.6
Q ss_pred ceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC---------------------Ccee
Q 008038 30 KTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT---------------------EGVV 86 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~---------------------~~~s 86 (580)
...+|+|++++.... +++..+.+|+|||++|||+||+++||+|+|+|+|+|.. .+++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 345699999987754 66779999999999999999999999999999999532 2899
Q ss_pred eeeccccccCCCCCCCCCC--CccccCCCCCeE---EEEEEc-CCCcceeeecCcc----hhhccccEEEEEEEcCCCCC
Q 008038 87 IHWHGIRQLGTPWADGTAS--ISQCPINPGETY---LYRFKV-DKAGTYFYHGHLG----MQRSAGLYGSLIVDVADGEK 156 (580)
Q Consensus 87 iH~HG~~~~~~~~~DG~~~--~~q~~i~pG~~~---~y~f~~-~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~ 156 (580)
|||||+++. +++||+|+ ++||+|+||++| +|+|++ +++||||||||.. .|+.+||+|+|||+++.+..
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999986 68999996 689999999555 999998 6899999999964 48899999999999976533
Q ss_pred CCC-CCCcceEEEEeecccCchHHHHhhhcC----C-----CCCCCCCCceEEeCccCCCCccccccccCCCcccccccC
Q 008038 157 EPF-HYDGEFNLLLSDWWHRSVHEQEVGLSS----R-----PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 226 (580)
Q Consensus 157 ~p~-~~d~e~~l~~~d~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~ 226 (580)
.++ .+|+|++|+++||+++...++...... . .......+++++|||+.++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p-------------------- 241 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP-------------------- 241 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC--------------------
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc--------------------
Confidence 222 358899999999998765443221100 0 0001235799999999987
Q ss_pred CCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe-eeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcc
Q 008038 227 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-KMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYN 304 (580)
Q Consensus 227 ~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~ 304 (580)
.+++++ ++|||||||+|..+.+.|+|++| +|+|||+||.++ +|+.++++.|+|||||||+|++++. +|+
T Consensus 242 -------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~-~g~ 312 (513)
T 2wsd_A 242 -------YLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAY-EGE 312 (513)
T ss_dssp -------EEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGG-TTC
T ss_pred -------eEEecC-CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCC-CCc
Confidence 688887 58999999999999999999999 999999999998 8999999999999999999999873 455
Q ss_pred -eEEEEeecCCCC---CCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEe
Q 008038 305 -YWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLN 380 (580)
Q Consensus 305 -y~l~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~ 380 (580)
+.+.. ...+. ......++++|........+. ....|.. +.. . ... +......+|++.+..
T Consensus 313 ~~~l~~--~~~~~~~~~~~~~~~il~~~~~~~~~~~~--~~~~p~~--l~~-------~-~~~--~~~~~~~~~~~~l~~ 376 (513)
T 2wsd_A 313 SIILAN--SAGCGGDVNPETDANIMQFRVTKPLAQKD--ESRKPKY--LAS-------Y-PSV--QHERIQNIRTLKLAG 376 (513)
T ss_dssp EEEEEE--CCCSSSSCCTTTTTEEEEEECCSCCSSCC--CCCCCSB--CSC-------C-GGG--CCCCEEEEEEEEEEE
T ss_pred EEEEEe--cccccccCCCCCCcceEEEEeccCcccCc--cCCCCcc--ccC-------C-CCc--ccCCCcceEEEEEEe
Confidence 33333 22221 122446888987432111110 0111110 000 0 000 111123356666554
Q ss_pred eeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEE
Q 008038 381 TQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVIL 460 (580)
Q Consensus 381 ~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l 460 (580)
.... .+...|.|||++|..+. .+.++.|++|+|+|
T Consensus 377 ~~~~-~g~~~~~iNg~~~~~~~--------------------------------------------~~~~~~g~~~~w~l 411 (513)
T 2wsd_A 377 TQDE-YGRPVLLLNNKRWHDPV--------------------------------------------TETPKVGTTEIWSI 411 (513)
T ss_dssp EECT-TSCEEEEETTBCTTSCC--------------------------------------------CBCCBTTCEEEEEE
T ss_pred ecCC-CCCceEeECCccCCCcc--------------------------------------------cEecCCCCEEEEEE
Confidence 3322 24457899999873210 15678999999999
Q ss_pred EcCCCCCCCCCCCCCeeecCCCeEEEeecCC---CCCcccccccCCC---------CCCccceEEeCCCcEEEEEEEe-c
Q 008038 461 QNANAIRPNLSEIHPWHLHGHDFWVLGRGEG---KFTKEDEKKFNLK---------NPPLKNTAVIFPYGWTALRFVA-D 527 (580)
Q Consensus 461 ~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g---~~~~~~~~~~~~~---------~p~~rDTv~vpp~g~v~irf~a-d 527 (580)
+|.+.+ .||||||||+|+|++++.. .|++. ..+++. ++.||||+.|+|+++++|+|++ |
T Consensus 412 ~N~~~~------~HP~HlHG~~F~Vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~d 483 (513)
T 2wsd_A 412 INPTRG------THPIHLHLVSFRVLDRRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGP 483 (513)
T ss_dssp EECSSS------CEEEEESSCCEEEEEEEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCS
T ss_pred EcCCCC------CcCEeEeCceEEEEEecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecC
Confidence 998877 8999999999999998652 12110 112222 3469999999999999999998 8
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
|||.|||||||++|++.|||++|.+.+
T Consensus 484 npG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 484 YSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp CCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 999999999999999999999998865
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=7.8e-79 Score=649.77 Aligned_cols=389 Identities=23% Similarity=0.349 Sum_probs=303.4
Q ss_pred eEEEEEEEEEEEeCCCCceeEEEEEcCC-CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 31 TRHYKWEVEYMFWSPDCKESIVMGINGQ-FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~-~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||+|+ |
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~~~---~ 79 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNK-LTEPTIVHWHGFDVN--WHNDAHPS---F 79 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEEC-SSSCBCEEEETCCCC--HHHHTCGG---G
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEEC-CCCceeEEeCCccCC--CccCCCCC---c
Confidence 45677776 999999 999999999999999999999 789999999999985 57999986 9
Q ss_pred cCCCCCeEEEEEEcC-CCcceeeecC----cchhhccccEEEEEEEcCCCCCCCCCCC-cceEEEEeecccCchHHHHhh
Q 008038 110 PINPGETYLYRFKVD-KAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~-~~Gt~wYH~H----~~~~~~~Gl~G~liV~~~~~~~~p~~~d-~e~~l~~~d~~~~~~~~~~~~ 183 (580)
+|+||++|+|+|++. ++|||||||| ++.|+.+||+|+|||+++.+. .++.|| +|++|+++||+++. .++..
T Consensus 80 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~- 156 (448)
T 3aw5_A 80 AITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVY- 156 (448)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEEC-
T ss_pred cCCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccc-
Confidence 999999999999995 8999999999 789999999999999998764 445677 89999999999976 43221
Q ss_pred hcC-CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE--
Q 008038 184 LSS-RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-- 260 (580)
Q Consensus 184 ~~~-~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i-- 260 (580)
+.. ........++.++|||+..+ .+++++| +|||||||+|..+.+.|+|
T Consensus 157 ~~~~~~~~~~~~~~~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~~ 208 (448)
T 3aw5_A 157 NPTPMEMIAGFLGNAVLVNGVKDA---------------------------VFKLSGG-SYRLRLVNGSNARLYMLSIVK 208 (448)
T ss_dssp CCCHHHHHHCCCCSEEEETTEETC---------------------------EEEEEEE-EEEEEEEECSSSCCEEEEEEE
T ss_pred cccccccccCccccEEEECCcccc---------------------------eEEECCC-eEEEEEEcCCCcceEEEEEEc
Confidence 100 00000236799999999876 7999999 9999999999999999999
Q ss_pred eC---eeeEEEEECCcccC-ceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC-------------CCCCceE
Q 008038 261 KN---HKMVVVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-------------ATPPALT 323 (580)
Q Consensus 261 ~g---h~~~via~DG~~v~-P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~-------------~~~~~~a 323 (580)
+| |+|+|||+||++++ |+.++++.|+|||||||+|++++ +.|+|++.....+. ......+
T Consensus 209 ~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 285 (448)
T 3aw5_A 209 KNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIA 285 (448)
T ss_dssp TTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEE
T ss_pred CCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEE
Confidence 99 99999999999997 99999999999999999999983 58999987644321 1123456
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCC
Q 008038 324 LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPT 403 (580)
Q Consensus 324 il~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~ 403 (580)
+++|.+...... +..++. + .. ...+...+|++.+... ...|+|||++|..+.
T Consensus 286 ~~~~~~~~~~~~----p~~L~~-------------l---p~-~~~~~~~~~~~~l~~~------~~~~~iNg~~~~~~~- 337 (448)
T 3aw5_A 286 TFLVEGKGEAVP----VEALSD-------------P---PP-EPPKPTRTRRFALSLS------GMQWTINGMFWNASN- 337 (448)
T ss_dssp EEEEEEECCCCC----CCCCSC-------------C---CC-CCCCCSEEEEEEEEEE------TTEEEETTBCCCTTC-
T ss_pred EEEEcCCCCCCC----ccccCC-------------C---CC-CCCCCCceEEEEEeCC------CceeeECCCcCCCCC-
Confidence 777864322111 111110 0 00 1112234566665432 125999999874311
Q ss_pred CcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEE-ccCCcEEEEEEEcCC-CCCCCCCCCCCeeecCC
Q 008038 404 PYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM-LGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGH 481 (580)
Q Consensus 404 p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~v~~~l~N~~-~~~~~~~~~HP~HlHG~ 481 (580)
| .+. ++.|++|+|+|+|.+ .+ .||||||||
T Consensus 338 -------------------p-----------------------~~~~~~~g~~v~~~i~N~~~~~------~HP~HLHG~ 369 (448)
T 3aw5_A 338 -------------------P-----------------------LFEHVSVEGVELWEIVNDKASM------PHPMHLHGF 369 (448)
T ss_dssp -------------------T-----------------------TCCCEEECEEEEEEEEECSSSC------CEEEEESSS
T ss_pred -------------------C-----------------------ceeccCCCCeEEEEEEcCCCCC------CcCEEECCc
Confidence 0 044 788999999999987 66 899999999
Q ss_pred CeEEEeecCCCCCc-cccccc----CCCCCCccceEEeCCCcEEEEE--EE---ecCceeeEEeeecchhhhcccEEEEe
Q 008038 482 DFWVLGRGEGKFTK-EDEKKF----NLKNPPLKNTAVIFPYGWTALR--FV---ADNPGAWAFHCHIEPHFHIGMGVVLA 551 (580)
Q Consensus 482 ~F~vv~~~~g~~~~-~~~~~~----~~~~p~~rDTv~vpp~g~v~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~ 551 (580)
+|||++++ |.+.. .+...+ ++.++.||||+.|+|+++++|+ |+ +||| |||||||++|++.|||++|.
T Consensus 370 ~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~ 446 (448)
T 3aw5_A 370 PMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIA 446 (448)
T ss_dssp CBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEE
T ss_pred eEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEE
Confidence 99999984 44431 111112 3345579999999999999665 88 8999 99999999999999999997
Q ss_pred c
Q 008038 552 L 552 (580)
Q Consensus 552 ~ 552 (580)
+
T Consensus 447 V 447 (448)
T 3aw5_A 447 V 447 (448)
T ss_dssp E
T ss_pred e
Confidence 6
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-76 Score=661.28 Aligned_cols=444 Identities=19% Similarity=0.245 Sum_probs=301.2
Q ss_pred CCceEEEEEEEEEEEe--CCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCC----------------------
Q 008038 28 GSKTRHYKWEVEYMFW--SPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTE---------------------- 83 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~--~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~---------------------- 83 (580)
....+.|+|++++.+. .+++..+.+|+|||++|||+|+|++||+|+|+|+|+| ++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L-~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRI-PKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECC-CTTCCCSEEEEEECCCSTTSCCGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECC-CCCcccccccccccCCCCCCcccc
Confidence 3445678888887664 4777889999999999999999999999999999995 33
Q ss_pred -------------------ceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCc----chhh
Q 008038 84 -------------------GVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHL----GMQR 139 (580)
Q Consensus 84 -------------------~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~----~~~~ 139 (580)
.++|||||+++. +++||++ ||+|+||++|+|+|++ +++||||||||. +.|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~ 182 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNV 182 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHT
T ss_pred ccccccccccccccccCCCCceEEcCCCccC--CcccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhh
Confidence 478899999885 6889976 9999999999999999 567999999995 6899
Q ss_pred ccccEEEEEEEcCCCCCCCC-CCCcceEEEEeecccCchHHHHhhhc---------C---C---CCCCCCCCceEEeCcc
Q 008038 140 SAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLS---------S---R---PLRWIGEPQTLLINGR 203 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~~~d~~~~~~~~~~~~~~---------~---~---~~~~~~~~~~~liNG~ 203 (580)
.+||+|+|||+++.+...++ .+|+|++|+|+||+++...+...... . . ........+.++|||+
T Consensus 183 ~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~ 262 (612)
T 3gyr_A 183 MAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred hccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCC
Confidence 99999999999877654444 35899999999998865433221100 0 0 0001234688999999
Q ss_pred CCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe-------eeEEEEECCccc-
Q 008038 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-------KMVVVEADGNYV- 275 (580)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh-------~~~via~DG~~v- 275 (580)
.++ .+.++ +++|||||||+|..+.+.|+|++| +|+|||+||.++
T Consensus 263 ~~p---------------------------~~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~ 314 (612)
T 3gyr_A 263 IWP---------------------------YADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLP 314 (612)
T ss_dssp ESC---------------------------EEEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEE
T ss_pred ccc---------------------------eEecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccc
Confidence 877 57775 568999999999999999999998 599999999988
Q ss_pred Cceee------eeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC------CCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 276 QPFEV------DDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 276 ~P~~~------d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
+|+.+ ++|.|+|||||||+|++++..+..|++......... .......+++|.............|..
T Consensus 315 ~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 394 (612)
T 3gyr_A 315 RPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEV 394 (612)
T ss_dssp EEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSS
T ss_pred cceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccc
Confidence 46554 589999999999999999843333444433222211 122334666665332221111111111
Q ss_pred CCCCCCC--ccccccccccccCCC-CCCCCCcceEEEEEeeee----------------ecCCeEEEEEcceeccCCCCC
Q 008038 344 PRWDDYD--HSKSFSNKIFALMGS-PKPPTNFHRRLTLLNTQN----------------TINGFTKWAINNVSLTLPPTP 404 (580)
Q Consensus 344 p~~~~~~--~~~~~~~~~~~~~~~-~~~p~~~~r~~~~~~~~~----------------~~~~~~~~~iNg~~~~~p~~p 404 (580)
....... ............... ............+..... .......|.+|+..|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~------ 468 (612)
T 3gyr_A 395 LSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF------ 468 (612)
T ss_dssp CCSSCCCCCTTSCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC------
Confidence 1000000 000000000000000 000000000000000000 000111222222211
Q ss_pred cchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeE
Q 008038 405 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 484 (580)
Q Consensus 405 ~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~ 484 (580)
.....+.++.|++|+|+|+|.+.+ .||||||||+||
T Consensus 469 --------------------------------------~~~~~~~~~~g~~~~w~i~N~~~~------~HP~HLHG~~F~ 504 (612)
T 3gyr_A 469 --------------------------------------NDGLGFTIGEGTHEQWTFLNLSPI------LHPMHIHLADFQ 504 (612)
T ss_dssp --------------------------------------TSCCCEEEETTCEEEEEEEECSSS------CEEEEESSCEEE
T ss_pred --------------------------------------CCCcceEeCCCCEEEEEEEcCCCC------CcCEeECCCcEE
Confidence 111237889999999999999888 899999999999
Q ss_pred EEeecCCCCCc----------------ccccccCCCCCCccceEEeCCCcEEEEEEE-ecCceeeEEeeecchhhhcccE
Q 008038 485 VLGRGEGKFTK----------------EDEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMG 547 (580)
Q Consensus 485 vv~~~~g~~~~----------------~~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~ 547 (580)
||+++.+.++. ......++.++.|||||.|+++++++|||+ +||||.|||||||++|||.|||
T Consensus 505 Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM 584 (612)
T 3gyr_A 505 VLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMM 584 (612)
T ss_dssp EEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCE
T ss_pred EEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCC
Confidence 99986543322 012235667889999999999999999999 6999999999999999999999
Q ss_pred EEEecccc
Q 008038 548 VVLALGVE 555 (580)
Q Consensus 548 ~~~~~~~~ 555 (580)
+.|.|.+.
T Consensus 585 ~~f~V~~p 592 (612)
T 3gyr_A 585 RPFVVMPP 592 (612)
T ss_dssp EEEEEECH
T ss_pred cceEEeCC
Confidence 99988653
No 16
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=9.3e-76 Score=641.72 Aligned_cols=456 Identities=19% Similarity=0.246 Sum_probs=320.1
Q ss_pred CCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCC----------------------
Q 008038 28 GSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTE---------------------- 83 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~---------------------- 83 (580)
....++|+|++++.+.. +++..+.+|+|||++|||+|++++||+|+|+++|+|...
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 34568899999988766 566789999999999999999999999999999996432
Q ss_pred ------------------ceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCcc----hhhc
Q 008038 84 ------------------GVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLG----MQRS 140 (580)
Q Consensus 84 ------------------~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~----~~~~ 140 (580)
++++||||+++. +.+||++ ||+|.||++++|+|++ +++||||||||.. .|+.
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~--~~~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~ 183 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCC--CccCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhh
Confidence 289999999986 4689986 8999999999999999 5899999999964 4999
Q ss_pred cccEEEEEEEcCCCCCCCC-CCCcceEEEEeecccCchHHH-H-----hh--hcC--C-C----CCCCCCCceEEeCccC
Q 008038 141 AGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQ-E-----VG--LSS--R-P----LRWIGEPQTLLINGRG 204 (580)
Q Consensus 141 ~Gl~G~liV~~~~~~~~p~-~~d~e~~l~~~d~~~~~~~~~-~-----~~--~~~--~-~----~~~~~~~~~~liNG~~ 204 (580)
+||+|+|||+++.+...++ .+|+|++|+++||+++...+. + .. +.. . . ......++.++|||+.
T Consensus 184 ~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~ 263 (612)
T 2g23_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc
Confidence 9999999999876533332 368999999999999754210 0 00 000 0 0 0002357999999998
Q ss_pred CCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe-------eeEEEEECCccc-C
Q 008038 205 QFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-------KMVVVEADGNYV-Q 276 (580)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh-------~~~via~DG~~v-~ 276 (580)
++ .++|++| +|||||||+|..+.+.|+|++| +|+|||+||+++ +
T Consensus 264 ~p---------------------------~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~ 315 (612)
T 2g23_A 264 WP---------------------------YADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPR 315 (612)
T ss_dssp SC---------------------------EEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEE
T ss_pred CC---------------------------eEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccC
Confidence 87 6999999 9999999999999999999999 899999999999 6
Q ss_pred ceeee------eEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCC-----C-CceEEEEecCCCCCCCCCCCCCC-C
Q 008038 277 PFEVD------DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT-----P-PALTLLNYHPTSASKIPLSPPPI-T 343 (580)
Q Consensus 277 P~~~d------~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~-----~-~~~ail~y~~~~~~~~~~~~~p~-~ 343 (580)
|+.++ +|.|+|||||||+|++++.++.+|+|+.......+.. . ....++++.........+...|. +
T Consensus 316 P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L 395 (612)
T 2g23_A 316 PVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVL 395 (612)
T ss_dssp EEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSC
T ss_pred CEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhh
Confidence 99999 9999999999999999986555688887542211100 0 11245655522111111111111 1
Q ss_pred C-CCCCCCccccccccccccCCC-CCCCCCcceEEEEEeee----------------eecCCeEEEEEcceeccCCCCCc
Q 008038 344 P-RWDDYDHSKSFSNKIFALMGS-PKPPTNFHRRLTLLNTQ----------------NTINGFTKWAINNVSLTLPPTPY 405 (580)
Q Consensus 344 p-~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~r~~~~~~~~----------------~~~~~~~~~~iNg~~~~~p~~p~ 405 (580)
. ....+..............+. ........+.+.+.... ...+....|.|||+.|..
T Consensus 396 ~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~----- 470 (612)
T 2g23_A 396 SGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND----- 470 (612)
T ss_dssp CSSCCCCCTTSCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS-----
T ss_pred ccccccCCcccccceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC-----
Confidence 0 000000000000000000000 00000000111111000 001112456777765521
Q ss_pred chhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEE
Q 008038 406 LGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 485 (580)
Q Consensus 406 l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~v 485 (580)
.+ .+.++.|++|+|+|+|.+.+ .|||||||+.|+|
T Consensus 471 ---------------~~------------------------~~~v~~G~~v~w~l~N~~~~------~HPiHlHg~~F~V 505 (612)
T 2g23_A 471 ---------------GL------------------------GFTIGEGTHEQWTFLNLSPI------LHPMHIHLADFQV 505 (612)
T ss_dssp ---------------CC------------------------CEEEETTCEEEEEEEECSSS------CEEEEESSCCEEE
T ss_pred ---------------CC------------------------ceEecCCCEEEEEEEeCCCC------CCCeEEcCceEEE
Confidence 11 17889999999999999877 8999999999999
Q ss_pred EeecCCCCCc----------------ccccccCCCCCCccceEEeCCCcEEEEEEEec-CceeeEEeeecchhhhcccEE
Q 008038 486 LGRGEGKFTK----------------EDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD-NPGAWAFHCHIEPHFHIGMGV 548 (580)
Q Consensus 486 v~~~~g~~~~----------------~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad-npG~w~~HCHil~H~d~GM~~ 548 (580)
++++...++. ......+..++.||||+.|+||++++|+|+|+ |||.|||||||++|+|.|||+
T Consensus 506 l~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~ 585 (612)
T 2g23_A 506 LGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMR 585 (612)
T ss_dssp EEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEE
T ss_pred ecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCce
Confidence 9985422211 00123455667899999999999999999999 999999999999999999999
Q ss_pred EEecccccccCCCccccc
Q 008038 549 VLALGVETVGNIPNQALA 566 (580)
Q Consensus 549 ~~~~~~~~~~~~p~~~~~ 566 (580)
.|.|.++++.++|.....
T Consensus 586 ~f~V~p~~~~~~~~~~~~ 603 (612)
T 2g23_A 586 PFVVMPPEALKFDHGGAH 603 (612)
T ss_dssp EEEEECHHHHTTC-----
T ss_pred EEEECchhhccCCCCCCC
Confidence 999999988888765433
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=8.4e-77 Score=634.54 Aligned_cols=412 Identities=22% Similarity=0.324 Sum_probs=306.3
Q ss_pred ceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
..++|+|++++.+++++|..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||+| ||
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~p---~~ 89 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQ-LTEETTLHWHGLEVP--GEVDGGP---QG 89 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--HHHHCCT---TC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeC-CcCceeEeecccccC--cccCCCC---cC
Confidence 45679999999999999999999999999999999999999999999999 789999999999986 4799997 89
Q ss_pred cCCCCCeEEEEEEcCC-CcceeeecCc----chhhccccEEEEEEEcCCCCC--CCCCC-CcceEEEEeecccCchHHHH
Q 008038 110 PINPGETYLYRFKVDK-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEK--EPFHY-DGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~~-~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~--~p~~~-d~e~~l~~~d~~~~~~~~~~ 181 (580)
+|.||++++|+|++.+ +||||||||. +.|+.+||+|+|||+++.+.. .|..| ..|++|+++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 9999999999999954 8999999995 689999999999999876533 23344 36899999999997643321
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE-
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV- 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i- 260 (580)
.............++.++|||+.++ .+.+ +|++|||||||+|..+.+.|+|
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~p---------------------------~~~v-~g~~~RlRliNas~~~~~~l~i~ 221 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIYP---------------------------QHAA-PRGWLRLRLLNGCNARSLNFATS 221 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSSC---------------------------EEEE-EEEEEEEEEEECCSSCCEEEEET
T ss_pred ccccccccccCCCCCEEEEcCCcCc---------------------------cEec-CCCEEEEEEEccCCCceeeeeec
Confidence 1100000000235789999999877 3555 6789999999999999999999
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCCCCCCC
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKI 335 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~~~~~~ 335 (580)
+||+|+|||+||.++ +|+.++++.|+|||||||+|++++ ++.|+|.+....... .......+++.......
T Consensus 222 dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 297 (488)
T 3od3_A 222 DNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAIS-- 297 (488)
T ss_dssp TCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEE--
T ss_pred CCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEeccCCCCcccccccCccceeEecccccC--
Confidence 699999999999987 899999999999999999999997 678998875433221 11122234443321000
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee----------------ec-------------C
Q 008038 336 PLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN----------------TI-------------N 386 (580)
Q Consensus 336 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~----------------~~-------------~ 386 (580)
..... |. .+......+......+|++.+..... .. .
T Consensus 298 ~~~~~---P~------------~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (488)
T 3od3_A 298 ASGAL---PD------------TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGH 362 (488)
T ss_dssp CCCCC---CS------------CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCC
T ss_pred CCCCC---Cc------------ccccCCCCcccccccceEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 00000 10 00000000011112345555532100 00 0
Q ss_pred C-e------------EEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCC
Q 008038 387 G-F------------TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 453 (580)
Q Consensus 387 ~-~------------~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 453 (580)
+ + ..|.|||+.|.. .++ .+.++.|
T Consensus 363 g~~~~~~~g~~~~~~~~~~ING~~~~~-------------------~~~------------------------~~~~~~G 399 (488)
T 3od3_A 363 GNMNHMNHGGKFDFHHANKINGQAFDM-------------------NKP------------------------MFAAAKG 399 (488)
T ss_dssp CCCCCSCCCGGGCGGGCEEETTBCCCT-------------------TCC------------------------SEECCBS
T ss_pred CccccccccccccccceeeECCeeCCC-------------------CCC------------------------ceEcCCC
Confidence 0 0 137899887631 111 1788999
Q ss_pred cEEEEEEEcCC-CCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec----C
Q 008038 454 TTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD----N 528 (580)
Q Consensus 454 ~~v~~~l~N~~-~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad----n 528 (580)
++|+|+|.|.+ .+ .|||||||++|+|++++..... ..++.|||||.|+ |+++.|+|+++ +
T Consensus 400 ~~e~w~l~N~~~~~------~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~ 464 (488)
T 3od3_A 400 QYERWVISGVGDMM------LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPK 464 (488)
T ss_dssp SCEEEEEECTTCCC------CEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCG
T ss_pred CEEEEEEEeCCCCC------CccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCC
Confidence 99999999987 56 8999999999999998543221 1245799999999 99999999974 5
Q ss_pred ceeeEEeeecchhhhcccEEEEec
Q 008038 529 PGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 529 pG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
||.|||||||++|+|.|||+.|.|
T Consensus 465 ~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 465 EHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp GGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCCEEEeCCchHHHhcCCcEEEEC
Confidence 789999999999999999999975
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.5e-53 Score=434.67 Aligned_cols=269 Identities=26% Similarity=0.408 Sum_probs=228.0
Q ss_pred ceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 30 KTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
.+|+|+|++++..+.+ +|..+.+|+|||++|||+||+++||+|+|+|+|. +..+++|||||+++.+++++||+|+++|
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~~~~~~DG~p~~t~ 79 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNM-TTLPHTIHWHGMLQRGTWQSDGVPHATQ 79 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeC-CCCceeEEecCcCCCCCcccCCCccccc
Confidence 3789999999998885 6888999999999999999999999999999999 7899999999999987779999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcchhh---ccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhc
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGMQR---SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 185 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~---~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~ 185 (580)
|+|+||++++|+|+++++||||||||...+. .+||+|+|||+++.....+..+|+|++|+++||++...... .
T Consensus 80 ~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~----~ 155 (318)
T 3g5w_A 80 HAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKP----G 155 (318)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCT----T
T ss_pred ccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeecccccccc----c
Confidence 9999999999999999999999999976543 48999999999875432223568999999999987643211 1
Q ss_pred CCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeee
Q 008038 186 SRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~ 265 (580)
..+.. ...+++++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|
T Consensus 156 ~~~~~-~~~~d~~~ING~~~~~------------------------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f 209 (318)
T 3g5w_A 156 EGGIP-GDVFDYYTINAKSFPE------------------------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHIS 209 (318)
T ss_dssp CCCCT-TCCCCEEEETTBCBTS------------------------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCE
T ss_pred cCCCC-CCcCcEEEEcCcCCCC------------------------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEE
Confidence 11111 2257899999998772 1248999999999999999965 79999999999
Q ss_pred EEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC----CCCceEEEEecCCC
Q 008038 266 VVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPTS 331 (580)
Q Consensus 266 ~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~----~~~~~ail~y~~~~ 331 (580)
+||+.||.++ +|..+|++.|.||||+||++++++ +|.|.++|+....... .....++|+|.+..
T Consensus 210 ~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~--pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 210 QIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS--CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEecCCcccCCCccccEEEECCCCEEEEEEECCC--CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999988 799999999999999999999987 8999999997654321 24557899998543
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1e-51 Score=425.91 Aligned_cols=268 Identities=25% Similarity=0.451 Sum_probs=226.8
Q ss_pred ceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 30 KTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
.+++|+|++++..+.+ +|.++.+|+|||++|||+|+|++||+|+|+|+|. +..+++|||||+++.+++|+||+|+++|
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~-l~~~~siH~HG~~~~~~~~~DGvp~vtq 80 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNN-TSLPHTIHWHGVHQKGTWRSDGVPGVTQ 80 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEE-SSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEEC-CCCCccEEeCCCCcCCCcccCCCCcccc
Confidence 5789999999999886 5999999999999999999999999999999999 6899999999999998888999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcch--hhc-cccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhc
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGM--QRS-AGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 185 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~--~~~-~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~ 185 (580)
|+|+||++++|+|++.++||||||||... |.. +||+|+|||+++.....+..+|+|++++++||+...... ..
T Consensus 81 ~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~~----~~ 156 (339)
T 2zwn_A 81 QPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADK----YG 156 (339)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTTC----TT
T ss_pred CccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheecccccc----cC
Confidence 99999999999999999999999999765 777 999999999987653334456899999999998732110 00
Q ss_pred CCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeee
Q 008038 186 SRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~ 265 (580)
..+.. ...++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||+|
T Consensus 157 ~~g~~-~~~~~~~~ING~~~~~------------------------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f 210 (339)
T 2zwn_A 157 EGGTP-MNVADYFSVNAKSFPL------------------------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDM 210 (339)
T ss_dssp CCCST-TSCCCEEEETTBCTTS------------------------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCE
T ss_pred CCCCC-ccccceEEEccccCCC------------------------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEE
Confidence 00111 1257899999998761 1258999999999999999954 89999999999
Q ss_pred EEEEECCcccC-ceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCC
Q 008038 266 VVVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPT 330 (580)
Q Consensus 266 ~via~DG~~v~-P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~ 330 (580)
+||+.||.+++ |..+|++.|+||||+||+|++++ +|.|+++|+....+. ......++|+|.+.
T Consensus 211 ~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~--pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 211 LVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS--CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC--CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 99999999985 88999999999999999999987 789999999765321 23445799999854
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.3e-53 Score=475.48 Aligned_cols=226 Identities=17% Similarity=0.178 Sum_probs=174.3
Q ss_pred CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC--------CccccCCCCCeEE
Q 008038 47 CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS--------ISQCPINPGETYL 118 (580)
Q Consensus 47 g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~--------~~q~~i~pG~~~~ 118 (580)
|..+..|+ ++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||+|+ ++||+|+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~-l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNM-ASHPVSLHAVGVSYW--KASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECC-SSSCCCCCCSSSCCC--SSSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEEC-CCCCEeEEecCcccC--ccccCCccCCCCcccccccCcCCCCCeEE
Confidence 55555554 8999999999999999999999 789999999999985 34555553 8899999999999
Q ss_pred EEEEcC----------CCcceeeecCcch--hhccccEEEEEEEcCCCCCCCCC-CCcceEEEEee------cccCchHH
Q 008038 119 YRFKVD----------KAGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSD------WWHRSVHE 179 (580)
Q Consensus 119 y~f~~~----------~~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~~~p~~-~d~e~~l~~~d------~~~~~~~~ 179 (580)
|+|++. ++||||||||... |+.+||+|+|||+++........ ..+|++|++++ |+......
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~ 216 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNS 216 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCcccccccccc
Confidence 999983 5799999999765 78999999999999765321111 12888888764 44433211
Q ss_pred HHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCce-eEEE
Q 008038 180 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNL 258 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~-~~~~ 258 (580)
...... +..+...++.++|||+... ..+.+++++||+|||||+|++... .|.|
T Consensus 217 ~~~~~~--~~~~~~~~~~~~ING~~~~------------------------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~ 270 (742)
T 2r7e_A 217 LMQDRD--AASARAWPKMHTVNGYVNR------------------------SLPGLIGCHRKSVYWHVIGMGTTPEVHSI 270 (742)
T ss_dssp --------CCSCCCCCCCCEETTBCTB------------------------CCCCCEECSSSCEEEECCCCCSSSCCCCC
T ss_pred ccccCC--CccccccCceEEECCccCC------------------------CCcceEEcCCCEEEEEEEeCCCCCcceEE
Confidence 111111 1112334678999999753 123589999999999999999765 6999
Q ss_pred EEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 259 AVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 259 ~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
||+||.|+|++ ..+|++.|.|||+++|++++++ +|.|+++|+....
T Consensus 271 hlhGh~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~--pG~w~~hCH~~~H 316 (742)
T 2r7e_A 271 FLEGHTFLVRN--------HRQASLEISPITFLTAQTLLMD--LGQFLLFCHISSH 316 (742)
T ss_dssp CCTTCCCEETT--------EECCSCCCCTTCCCEEEECCCS--CSEECCCCCSSSS
T ss_pred EECCCEEEEEe--------EecceEEeCCCcEEEEEEEeCC--CeeEEEEeCChhH
Confidence 99999999974 2478899999999999999987 8999999997654
No 21
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.6e-50 Score=469.95 Aligned_cols=453 Identities=15% Similarity=0.200 Sum_probs=292.4
Q ss_pred cccCCceEEEEEEEEEEEeC--CCCc--------------------------eeEEE-------EEcCC--------CCC
Q 008038 25 TSYGSKTRHYKWEVEYMFWS--PDCK--------------------------ESIVM-------GINGQ--------FPG 61 (580)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~--~~g~--------------------------~~~~~-------~~NG~--------~pg 61 (580)
..+.+.+|+|-+.+++..+. |.+. .+.++ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 44568899999999998754 3322 23333 57877 999
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeecccccc----CCCCCCCCCC--CccccCCCCCeEEEEEEcCC----------
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQL----GTPWADGTAS--ISQCPINPGETYLYRFKVDK---------- 125 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~----~~~~~DG~~~--~~q~~i~pG~~~~y~f~~~~---------- 125 (580)
|+||+++||+|+|+|+|+ ++++++|||||++++ +.+|+||+++ ++||+|+||++|+|+|++.+
T Consensus 95 P~Ir~~~GD~v~v~v~N~-l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~ 173 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNL-ASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGN 173 (1065)
T ss_dssp CCEEEETTCEEEEEEEEE-SSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCS
T ss_pred CeEEEeCCeEEEEEEEEC-CCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCC
Confidence 999999999999999999 789999999999986 5578899998 89999999999999999955
Q ss_pred CcceeeecCcchh--hccccEEEEEEEcCCCCCCC--CCCCcceEEEEe------ecccCchHHHHh-h---hcCCCCCC
Q 008038 126 AGTYFYHGHLGMQ--RSAGLYGSLIVDVADGEKEP--FHYDGEFNLLLS------DWWHRSVHEQEV-G---LSSRPLRW 191 (580)
Q Consensus 126 ~Gt~wYH~H~~~~--~~~Gl~G~liV~~~~~~~~p--~~~d~e~~l~~~------d~~~~~~~~~~~-~---~~~~~~~~ 191 (580)
+||||||||...+ +.+||+|+|||+++.....| ..+|+|++|+++ ||++........ . .......+
T Consensus 174 aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~ 253 (1065)
T 2j5w_A 174 CVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDF 253 (1065)
T ss_dssp EEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHH
T ss_pred ceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCccccccccccc
Confidence 4999999997654 57999999999998754333 456899999999 566543221110 0 00000000
Q ss_pred CCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEE
Q 008038 192 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEA 270 (580)
Q Consensus 192 ~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~ 270 (580)
...+..++|||+.+. ..+.+++++||+|||||+|+|.. ..+.|+|+||+|+
T Consensus 254 ~~~~~~~~iNG~~~~------------------------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~---- 305 (1065)
T 2j5w_A 254 QQSNRMYSVNGYTFG------------------------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT---- 305 (1065)
T ss_dssp HHHTEEEEETTEETT------------------------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE----
T ss_pred cccCcEEEECCccCC------------------------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE----
Confidence 112457999999753 12368999999999999999975 6899999999999
Q ss_pred CCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCC-CCCC
Q 008038 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPR-WDDY 349 (580)
Q Consensus 271 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~-~~~~ 349 (580)
++|+.+|++.|+||||+||+|++++ +|.|+|+|+..... .....+.++|.+..... ..+.|..+. +...
T Consensus 306 ----v~p~~~dtv~I~pGer~dVlv~~~~--pG~y~i~~h~~~h~--~~Gm~~~~~V~~~~~~~--~~~~~~g~~~~~~~ 375 (1065)
T 2j5w_A 306 ----NKNYRIDTINLFPATLFDAYMVAQN--PGEWMLSCQNLNHL--KAGLQAFFQVQECNKSS--SKDNIRGKHVRHYY 375 (1065)
T ss_dssp ----ETTEEESEEEECBTCEEEEEEECCS--CEEEEEEECSHHHH--HTTCEEEEEEECSCCCC--CCCCCTTSEEEEEE
T ss_pred ----ECCeeecEEEECCCcEEEEEEEeCC--CeeEEEEecCcchh--hCCCEEEEEEecCCCcc--ccccccccceeEEE
Confidence 3578999999999999999999987 79999999875422 23467888887432211 111111100 0000
Q ss_pred CccccccccccccC-----CCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCC
Q 008038 350 DHSKSFSNKIFALM-----GSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 424 (580)
Q Consensus 350 ~~~~~~~~~~~~~~-----~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~ 424 (580)
....+....+.+.. .....+.....+++|.......++.+.-.++ +++.. +.|....+
T Consensus 376 i~A~e~~wdy~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~~~-- 438 (1065)
T 2j5w_A 376 IAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVY-REYTD--------------ASFTNRKE-- 438 (1065)
T ss_dssp EEEEEEEEESCTTSBCTTTCCBTTCTTCTTHHHHCCBTTBCCSEEEEEEE-EEESS--------------TTCCSBCC--
T ss_pred EeceecccccCCCCcccccccccCCCcccchhhhccCCcccCceEeeeee-ecccC--------------CceEEcCc--
Confidence 00000000000000 0000011111111222222223344444444 44421 11211000
Q ss_pred CCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCC
Q 008038 425 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLK 504 (580)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~ 504 (580)
..+.....-.-++++.++.|++++++|+|.... .|+||+||+.|++.+.|. .|.. . .....
T Consensus 439 ---------~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~------~~s~h~hG~~f~~~~~g~-~~~~--~-~~~~~ 499 (1065)
T 2j5w_A 439 ---------RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAY------PLSIEPIGVRFNKNNEGT-YYSP--N-YNPQS 499 (1065)
T ss_dssp ---------CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS------CBCCEEESSBCCGGGCSB-CCBC--C------
T ss_pred ---------CCcccccccccCceEEEeCCCEEEEEEEECCCC------CccCcccceeeeccCCCc-cccc--c-ccccc
Confidence 000000011123579999999999999998766 899999999999988743 2211 0 00001
Q ss_pred CCCccceEEeCCCcEEEEEEEec---Cce-------eeEEeeecchhhh--cccEEEEec
Q 008038 505 NPPLKNTAVIFPYGWTALRFVAD---NPG-------AWAFHCHIEPHFH--IGMGVVLAL 552 (580)
Q Consensus 505 ~p~~rDTv~vpp~g~v~irf~ad---npG-------~w~~HCHil~H~d--~GM~~~~~~ 552 (580)
+...++...|.||+..+.++... .|| .|+||+|+..=.| .|+.+.+.+
T Consensus 500 ~~~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGplli 559 (1065)
T 2j5w_A 500 RSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKI 559 (1065)
T ss_dssp --CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEE
T ss_pred CCccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEE
Confidence 23356667778999888888762 565 7999999988766 788888853
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.7e-49 Score=424.58 Aligned_cols=396 Identities=15% Similarity=0.092 Sum_probs=258.2
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
+...+++++++++...+..+ ..+++|||++ +|+|+|++||+|+|+|+|. ....+++||||... .
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~-~~~~h~~~~~g~~~-----------~ 87 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNG-EGAQHDVVVDQYAA-----------R 87 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECS-SSSCBCCEETTTTE-----------E
T ss_pred CCCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcC-CCCceEEEEccCCc-----------c
Confidence 34456667766654333333 3466999999 9999999999999999999 56669999999642 2
Q ss_pred ccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCC------cceEEEEeecccCchHHH
Q 008038 107 SQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD------GEFNLLLSDWWHRSVHEQ 180 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d------~e~~l~~~d~~~~~~~~~ 180 (580)
++|+|+||++++|.|++.++||||||||...|+.+||+|.|+|+++........++ .+++..+ |+.......
T Consensus 88 ~~~~i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~- 165 (447)
T 2dv6_A 88 SAIVNGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVR- 165 (447)
T ss_dssp CCCBCSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEE-
T ss_pred cceecCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEE-
Confidence 48999999999999999889999999999889999999999999876422110110 0111100 111000000
Q ss_pred HhhhcCCCCCC----CCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCC-cee
Q 008038 181 EVGLSSRPLRW----IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA-LAS 255 (580)
Q Consensus 181 ~~~~~~~~~~~----~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~-~~~ 255 (580)
..+....... ....+.++|||+. + .+++++++|++|||||+|.+. ...
T Consensus 166 -~~l~~~~~~~~~~~g~~~~~~~~NG~~-p-------------------------gp~i~v~~G~~v~~rl~N~~~~~~~ 218 (447)
T 2dv6_A 166 -IDLETVEVKGQLDDNTTYTYWTFNGKV-P-------------------------GPFLRVRVGDTVELHLKNHKDSLMV 218 (447)
T ss_dssp -EEEEEEEEEEEEETTEEEEEEEETTBB-S-------------------------CCCEEEETTCEEEEEEEECTTCSSC
T ss_pred -EEEEEEEEEEeccCCceeEEEEECCcc-C-------------------------CCeEEecCCCEEEEEEEeCCCCcee
Confidence 0000000000 0124578888874 1 137999999999999999975 245
Q ss_pred EEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC-CCCceEEEEecCCCCCC
Q 008038 256 LNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA-TPPALTLLNYHPTSASK 334 (580)
Q Consensus 256 ~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~-~~~~~ail~y~~~~~~~ 334 (580)
+.++++|. ++.||.+ +++.|.||||+++++++++ +|+||+|++......+ .....+.+.|.+...
T Consensus 219 ~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~~--~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-- 284 (447)
T 2dv6_A 219 HSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKALI--PGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-- 284 (447)
T ss_dssp BCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECCS--CEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--
T ss_pred EEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECCC--CeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--
Confidence 77777764 3578873 2346999999999999987 7999999985211111 223457777763211
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCC
Q 008038 335 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 414 (580)
Q Consensus 335 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~ 414 (580)
+|.++. ++...+..... .... .......+............|.|||+.+....
T Consensus 285 --------~P~~d~-----~~~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~------------ 337 (447)
T 2dv6_A 285 --------LPQVDR-----EFYVMQGEIYT-VKSF-GTSGEQEMDYEKLINEKPEYFLFNGSVGSLTR------------ 337 (447)
T ss_dssp --------SCCCSE-----EEEEEEEEECB-SSCT-TCCEECCBBHHHHHTTCCSEEEETTSTTCCCC------------
T ss_pred --------CCCCCe-----eEEEEeccccc-CCcc-cccccccCChHHhhccCCCEEEECCcccCCCC------------
Confidence 111110 00000000000 0000 00000000000000011246788887652110
Q ss_pred ccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEEEeecCCCC
Q 008038 415 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKF 493 (580)
Q Consensus 415 ~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~vv~~~~g~~ 493 (580)
...+.++.|++++|+|+|.+. . .||||||||+|+||+.+++ +
T Consensus 338 ------------------------------~~~~~v~~g~~vrlrliN~~~~~------~h~~hlhGh~f~vv~~dG~-~ 380 (447)
T 2dv6_A 338 ------------------------------SHPLYASVGETVRIFFGVGGPNF------TSSFHVIGEIFDHVYSLGS-V 380 (447)
T ss_dssp ------------------------------CCCEEECTTCEEEEEEEEEESSC------CEEEEEETCCEEEECGGGC-S
T ss_pred ------------------------------CcceEECCCCEEEEEEEeCCCCc------eEeEEEcCcEEEEEEcCCc-c
Confidence 013888999999999999763 3 8999999999999997432 2
Q ss_pred CcccccccCCCCCC-ccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 494 TKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 494 ~~~~~~~~~~~~p~-~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+..|. +|||+.|+||+++.|+|+++|||.|+||||+++|++.||+++|.+..
T Consensus 381 ---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 381 ---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp ---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred ---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 12334 69999999999999999999999999999999999999999997644
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=6.3e-49 Score=403.01 Aligned_cols=268 Identities=22% Similarity=0.280 Sum_probs=222.0
Q ss_pred cCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.+. ..++++||||+. .+||.+
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 4678899999999999887 899999999999999999999999999999999953 269999999984 368887
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCc---chhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHH
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHL---GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~ 181 (580)
.. ..|.||++++|+|+++++||||||||. ..|+.+||+|+|||++++. .| .+|+|++++++||++.+.....
T Consensus 109 ~~--~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p-~~d~e~~l~~~d~~~~~~~~~~ 183 (327)
T 1kbv_A 109 AA--TFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP-KVDKEFYIVQGDFYTKGKKGAQ 183 (327)
T ss_dssp TT--TCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCC
T ss_pred cc--eeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC-CCceEEEEEeeeeeccCccccc
Confidence 54 359999999999999999999999995 6899999999999998643 23 5789999999999987531100
Q ss_pred h--hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 182 V--GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 182 ~--~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
. ........ ...++.++|||+.++.|. .+.+++++||+|||||+|+|....+.|+
T Consensus 184 g~~~~~~~~~~-~~~~~~~~iNG~~~~~~~----------------------~~~l~v~~G~~vRlRliN~~~~~~~~~~ 240 (327)
T 1kbv_A 184 GLQPFDMDKAV-AEQPEYVVFNGHVGALTG----------------------DNALKAKAGETVRMYVGNGGPNLVSSFH 240 (327)
T ss_dssp EEECBCHHHHH-HTCCSEEEETTSTTTTSG----------------------GGCEEEETTEEEEEEEEEEESSCCEEEE
T ss_pred cccccChhHhc-cCCCceEEEcCcccCCCC----------------------ceeEEeCCCCEEEEEEECCCCCCceeEE
Confidence 0 00000000 135789999999987311 1369999999999999999988899999
Q ss_pred EeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 260 VKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 260 i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
|+||+|+||+.||.+++|..++++.|+||||+||+|++++ +|.|+|+|+..... ......|+++|.+.
T Consensus 241 l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~--pG~y~l~~h~~~~~-~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 241 VIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI--PGNYTLVDHSIFRA-FNKGALGQLKVEGA 308 (327)
T ss_dssp EETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS--CEEEEEEESSTHHH-HHSSCEEEEEEESC
T ss_pred EeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC--CeEEEEEecccccc-ccCCcEEEEEECCC
Confidence 9999999999999999999999999999999999999997 79999999865432 12356899999854
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=2.5e-47 Score=384.16 Aligned_cols=238 Identities=21% Similarity=0.312 Sum_probs=208.4
Q ss_pred CCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 28 GSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
...+++|+|++++..+.. +|..+.+|+|||++|||+||+++||+|+|+|+|+ +..+++|||||++. .++||+|++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~-~~~~~~iH~HG~~~---~~~DG~p~~ 106 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNA-GAHPHTIHFHGVHR---ATMDGTPGI 106 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-SSSCBCCEESSCCC---GGGSCCTTS
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeC-CCCcccEEeccccc---cccCCCCCc
Confidence 446789999999988774 5999999999999999999999999999999999 78999999999973 689999999
Q ss_pred ccccCCCCCeEEEEEEcCCCcceeeecCcc---hhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhh
Q 008038 107 SQCPINPGETYLYRFKVDKAGTYFYHGHLG---MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~ 183 (580)
+|++|+||++++|+|+++++||||||||.. .|+.+||+|+|||+++... ..+|+|++|+++||+.++
T Consensus 107 ~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~---~~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR---PPADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp TTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC---CCCSEEEEEEEEEECCSS-------
T ss_pred cceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC---CCCcceEEEEEeeEecCC-------
Confidence 999999999999999999999999999975 6899999999999987652 245799999999998762
Q ss_pred hcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCce-eEEEEEeC
Q 008038 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKN 262 (580)
Q Consensus 184 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~-~~~~~i~g 262 (580)
...++.++|||+.+++ ....+++++|++|||||+|++... .+.|||+|
T Consensus 177 --------g~~~~~~~iNG~~~~~-----------------------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG 225 (288)
T 3gdc_A 177 --------GDDNEFYSVNGLPFHF-----------------------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHG 225 (288)
T ss_dssp --------TTCCSEEEETTSTTHH-----------------------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETT
T ss_pred --------CCCcceEEECcccccc-----------------------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcC
Confidence 1146889999998751 012589999999999999998654 69999999
Q ss_pred eeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 263 HKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 263 h~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
|.|+|++ +|..+ .|...|++.|.||||++|++++++ +|.|.++|+...
T Consensus 226 ~~f~v~~-~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~--pG~~~~hCH~~~ 274 (288)
T 3gdc_A 226 NFFHYYP-TGTMLTPSEYTDTISQVQGQRGILELRFPY--PGKFMFHAHKTE 274 (288)
T ss_dssp CCEEEEE-TTCCSSCSEEESEEEEETTCEEEEEECCCS--CEEEEEECSSHH
T ss_pred CEEEEEc-CCCccCCCceeeEEEeCCCceEEEEEECCC--CEEEEEEecChH
Confidence 9999988 55555 578999999999999999999987 899999998644
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=9.7e-48 Score=448.31 Aligned_cols=389 Identities=17% Similarity=0.210 Sum_probs=263.4
Q ss_pred ceeEEEEEcCCCCC--CeEEecCCCEEEEEEEeCCCCCceeeeeccccccC-CCCCCCCCCCccccCCCCCeEEEEEEcC
Q 008038 48 KESIVMGINGQFPG--PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLG-TPWADGTASISQCPINPGETYLYRFKVD 124 (580)
Q Consensus 48 ~~~~~~~~NG~~pg--P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~-~~~~DG~~~~~q~~i~pG~~~~y~f~~~ 124 (580)
..+.+.++||++|| |.|++++||+|.++|.|. .+.+||||+++.+ ++++||++.++ |+|.||.+++|.|++.
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 56789999999999 889999999999999987 3459999999998 89999999998 9999999999999999
Q ss_pred CCcceeeecCcchhhccccEEEEEEEcCCCCCCC-CCCCcceEEEE----eecccCchHHHHhhhcCCCCCCCCCCceEE
Q 008038 125 KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEP-FHYDGEFNLLL----SDWWHRSVHEQEVGLSSRPLRWIGEPQTLL 199 (580)
Q Consensus 125 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p-~~~d~e~~l~~----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (580)
++||||||||+..|+.+||.|.++|+++.....+ +.||.|.++.+ +||++.+.......+...... .+...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987554444 67888999999 899998765433222111011 133344
Q ss_pred eCccCCCCcc-----ccccccCCCcc----cccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEE
Q 008038 200 INGRGQFNCS-----LAAHFSNGSAE----QCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 270 (580)
Q Consensus 200 iNG~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~ 270 (580)
+|+....-.+ ..-.|++.... .+.....-+...++|++++|+++++||.|... ..+.++.+|. .+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC
Confidence 4543211000 00011111000 00000001233478999999999999999864 4566777663 33221
Q ss_pred CCcccCceeeeeEEEcCCceEEEEEEeCCCC--------CcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCC
Q 008038 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDP--------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 271 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~--------~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
| ...+.||++++..+...+.. .|+||++++......-.....+.|.+.+.... ....
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l--~~~~--- 909 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL--KVFN--- 909 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC-------C---
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccc--cccC---
Confidence 2 12468999988888876421 26899998743210001122344444321110 0000
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeee----------------------------cCCeEEEEEc
Q 008038 343 TPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT----------------------------INGFTKWAIN 394 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~----------------------------~~~~~~~~iN 394 (580)
++ .++++.+...... ......|.||
T Consensus 910 -------------------------~~--~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iN 962 (1065)
T 2j5w_A 910 -------------------------PR--RKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAIN 962 (1065)
T ss_dssp -------------------------CC--CEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEET
T ss_pred -------------------------CC--cceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccCceEEEC
Confidence 00 0111111110000 0001134555
Q ss_pred ceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCC--CCCCCCCC
Q 008038 395 NVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN--AIRPNLSE 472 (580)
Q Consensus 395 g~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~--~~~~~~~~ 472 (580)
|..|. ....+.++.|++|+|+|.|.+ .+
T Consensus 963 G~~~~--------------------------------------------~~~~~~v~~G~~vr~~l~N~g~~~~------ 992 (1065)
T 2j5w_A 963 GRMFG--------------------------------------------NLQGLTMHVGDEVNWYLMGMGNEID------ 992 (1065)
T ss_dssp TBCTT--------------------------------------------CCCCCEEETTCEEEEEEEECCSTTC------
T ss_pred CccCC--------------------------------------------CCccEEeCCCCEEEEEEEeCCCCCc------
Confidence 54331 112378999999999999974 34
Q ss_pred CCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 473 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 473 ~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||||||||.|+|++++ |.+|||+.|+||++++|+|++||||.|+||||+++|++.|||++|.|
T Consensus 993 ~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V 1056 (1065)
T 2j5w_A 993 LHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 1056 (1065)
T ss_dssp CEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEE
T ss_pred ceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEE
Confidence 89999999999999762 47899999999999999999999999999999999999999999988
Q ss_pred ccc
Q 008038 553 GVE 555 (580)
Q Consensus 553 ~~~ 555 (580)
...
T Consensus 1057 ~~~ 1059 (1065)
T 2j5w_A 1057 LQN 1059 (1065)
T ss_dssp ECC
T ss_pred ecC
Confidence 654
No 26
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=2.6e-45 Score=377.49 Aligned_cols=134 Identities=31% Similarity=0.506 Sum_probs=109.1
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeE-EEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESI-VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
+.+++++|+|++++. ++|.+.. ++.+||++|||+|+|++||+|+|+|+|. ++++++|||||+.+. +++||++
T Consensus 44 ~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~-l~~~~sih~HG~~~~--~~~DG~~- 116 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNT-MDVRASLHVHGLDYE--ISSDGTA- 116 (343)
T ss_dssp -CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT-
T ss_pred CCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEEC-CCCCeeEEecCcccC--CcCCCcc-
Confidence 356789999999874 3554332 2235899999999999999999999999 689999999999986 6899999
Q ss_pred CccccCCCCCeEEEEEEcCC-------------CcceeeecCc------chhhccccEEEEEEEcCCCCCCCCCCCcceE
Q 008038 106 ISQCPINPGETYLYRFKVDK-------------AGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFN 166 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~-------------~Gt~wYH~H~------~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~ 166 (580)
++||+|.||++++|+|++.+ +|+||||||. ..|+..||+|+|||+++.+. .+|+|++
T Consensus 117 ~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~----~pd~e~~ 192 (343)
T 3cg8_A 117 MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV----LPDATHT 192 (343)
T ss_dssp TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC----CCSEEEE
T ss_pred cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC----CCCceEE
Confidence 88999999999999999954 5899999995 36889999999999986541 2355665
Q ss_pred EEEee
Q 008038 167 LLLSD 171 (580)
Q Consensus 167 l~~~d 171 (580)
|+++|
T Consensus 193 l~~~d 197 (343)
T 3cg8_A 193 IVFND 197 (343)
T ss_dssp EEEET
T ss_pred EEccc
Confidence 55543
No 27
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=4.5e-45 Score=390.87 Aligned_cols=269 Identities=21% Similarity=0.266 Sum_probs=222.7
Q ss_pred cCCceEEEEEEEEEEEeC-CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS-PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ..+++|||||+.. +||.+
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 577899999999999988 5899999999999999999999999999999999953 2699999999863 68877
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecC---cchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHH
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H---~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~ 181 (580)
.+ .+|.||++++|+|+++++|||||||| ...|+.+||+|+|||++++. .| .+|+|++|+++||++.......
T Consensus 99 ~~--~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~~ 173 (442)
T 2zoo_A 99 ES--SFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG--LA-PVDREYYLVQGDFYTKGEFGEA 173 (442)
T ss_dssp GG--CCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCC
T ss_pred cc--EEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC--CC-CCCceEEEEeeeeeccCccccc
Confidence 64 36999999999999999999999997 56899999999999997643 22 6789999999999987532100
Q ss_pred -h-hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 182 -V-GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 182 -~-~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
. .+...... ...+++++|||+.++. ...+.+++++|++|||||+|+|....+.|+
T Consensus 174 ~~~~~~~~~~~-~~~~~~~liNG~~~~~----------------------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~ 230 (442)
T 2zoo_A 174 GLQPFDMAKAI-DEDADYVVFNGSVGST----------------------TDENSLTAKVGETVRLYIGNGGPNLVSSFH 230 (442)
T ss_dssp EEECBCHHHHH-TTCCSEEEETTSTTTT----------------------SGGGCEEEETTCEEEEEEEEEESSCCEEEE
T ss_pred ccccCChhHhc-cCCCCEEEECCCcCCC----------------------CCCCceEeCCCCEEEEEEEeCCCCCceeeE
Confidence 0 00000000 2467999999998651 011369999999999999999988889999
Q ss_pred EeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCC
Q 008038 260 VKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 331 (580)
Q Consensus 260 i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~ 331 (580)
|+||+|+||+.||.+++|..++++.|.||||+||+|++++ +|+|+++++..... ......++++|.+..
T Consensus 231 i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~--~G~y~~~~~~~~~~-~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 231 VIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV--PGTFILVDHSIFRA-FNKGALAMLKVEGPD 299 (442)
T ss_dssp EETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS--CEEEEEEESSTHHH-HTTSCEEEEEEESCC
T ss_pred EcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC--CCeEEEEecccccc-cccCceEEEEecCCC
Confidence 9999999999999999999999999999999999999987 79999999865431 134568999998544
No 28
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=6.7e-44 Score=367.39 Aligned_cols=269 Identities=19% Similarity=0.219 Sum_probs=211.4
Q ss_pred ccCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
.+.+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|+ .+++||||+++.+....||.+
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~----~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP----PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----TTCCSCBCCEETTSCSGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----CCCcccccceecCCCCCCCCC
Confidence 45678999999999998886 6999999999999999999999999999999999 378999999986544456556
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCcc-----hhhccccEEEEEEEcCCCC----CCCCCCCcceEEEEeecccC
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHLG-----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR 175 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~-----~~~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~~~d~~~~ 175 (580)
+++ .|+||++++|+|++.++||||||||.. .|+.+||+|+|||+++... ..|..||+|++|+++||++.
T Consensus 103 ~~~--~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GGC--CBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred cee--EeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 555 499999999999999999999999975 6999999999999976532 23567899999999999984
Q ss_pred ch--HHHHhhhcC---------CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEE
Q 008038 176 SV--HEQEVGLSS---------RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 244 (580)
Q Consensus 176 ~~--~~~~~~~~~---------~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~r 244 (580)
.. ..+ ..+.. ..+. ...++.++|||+.++ + ...+.+++++||+||
T Consensus 181 ~~~~g~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~ING~~~~-------~---------------~~~~~l~v~~Ger~R 236 (333)
T 1mzy_A 181 KDEDGTY-MRFSDPSEGYEDMVAVMD-TLIPSHIVFNGAVGA-------L---------------TGEGALKAKVGDNVL 236 (333)
T ss_dssp BCTTSCB-CCCSSHHHHHHHHHHHHT-TTCCSEEEETTSTTT-------T---------------SGGGCEEEETTCEEE
T ss_pred ccccccc-cccccccccccchhHHhh-ccCCcEEEECCcccc-------c---------------CCCcceEecCCCEEE
Confidence 21 110 00000 0000 235789999999865 1 012369999999998
Q ss_pred EEEeecCCceeEEEEEeCeeeEEEEECCcccCc-e-eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCce
Q 008038 245 LRIASTTALASLNLAVKNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPAL 322 (580)
Q Consensus 245 lRliNag~~~~~~~~i~gh~~~via~DG~~v~P-~-~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ 322 (580)
||++|++....+ ..+++|.++|++ ||.++++ . .++++.|.||||+||+|++++ +|+|+++|+..... ......
T Consensus 237 l~n~~~~~~~~~-h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~--pG~y~~~ch~~~h~-~~~Gm~ 311 (333)
T 1mzy_A 237 FVHSQPNRDSRP-HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ--PGVYAYVNHNLIEA-VHKGAT 311 (333)
T ss_dssp EEEEESSSCBCE-EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTCCE
T ss_pred EEECCCCCcccc-EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC--CEEEEEecChhhhH-hhCCCE
Confidence 887776543323 347899999999 9999964 4 489999999999999999997 79999999975431 124567
Q ss_pred EEEEecC
Q 008038 323 TLLNYHP 329 (580)
Q Consensus 323 ail~y~~ 329 (580)
++++|.+
T Consensus 312 ~~~~v~~ 318 (333)
T 1mzy_A 312 AHVLVEG 318 (333)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 8999984
No 29
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=7.7e-44 Score=367.56 Aligned_cols=270 Identities=23% Similarity=0.277 Sum_probs=206.2
Q ss_pred cCCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|++ +++||||+++.+..++||.+
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~h~~~~h~~~~~~~~~ 103 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA----TNAMPHNVDFHGATGALGGA 103 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC----CCCccccceECCCCCCCCCc
Confidence 466789999999998754 779999999999999999999999999999999994 23566666555445667766
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCc----chhhccccEEEEEEEcCCCC----CCCCCCCcceEEEEeecccCc
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHL----GMQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRS 176 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~~~d~~~~~ 176 (580)
.+++ |.||++++|+|++.++||||||||. ..|+.+||+|+|||+++... ..|..||+|++|+++||++..
T Consensus 104 ~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 104 KLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred ceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 6654 9999999999999999999999996 47999999999999986542 235567999999999999852
Q ss_pred hHH-HHhhhcCCCCC--------CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEE
Q 008038 177 VHE-QEVGLSSRPLR--------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRI 247 (580)
Q Consensus 177 ~~~-~~~~~~~~~~~--------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRl 247 (580)
... .+..+...+.. ....++.++|||+.++.|. .+.+++++||+|||
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~----------------------~~~l~v~~GervRl-- 237 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTG----------------------ANALTAKVGETVLL-- 237 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSG----------------------GGCEEEETTCEEEE--
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCCC----------------------CcceEcCCCCEEEE--
Confidence 110 00000000000 0236789999999876210 13699999997765
Q ss_pred eecCCceeEE-EEEeCeeeEEEEECCcccCce--eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEE
Q 008038 248 ASTTALASLN-LAVKNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL 324 (580)
Q Consensus 248 iNag~~~~~~-~~i~gh~~~via~DG~~v~P~--~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ai 324 (580)
+|++..+.+. +.|++|.|+|++ ||.+++|. .++++.|++|||+||+|++++ +|+|+++|+..... ......|+
T Consensus 238 in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~--pG~y~~~~h~~~~~-~~~G~~~~ 313 (336)
T 1oe1_A 238 IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVYAYLNHNLIEA-FELGAAGH 313 (336)
T ss_dssp EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEE
T ss_pred EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC--CceEEEEechhhcc-ccCCCeEE
Confidence 5665554544 446999999997 99999764 368999999999999999997 79999999864321 12456789
Q ss_pred EEecCC
Q 008038 325 LNYHPT 330 (580)
Q Consensus 325 l~y~~~ 330 (580)
++|.+.
T Consensus 314 ~~V~~~ 319 (336)
T 1oe1_A 314 IKVEGK 319 (336)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 999853
No 30
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=9.9e-44 Score=355.75 Aligned_cols=239 Identities=21% Similarity=0.296 Sum_probs=198.5
Q ss_pred ccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
.+.+++|+|+|++++. ..+......+++||++|||+||+++||+|+|+|+|+ ++.++||||||+++. .++||++
T Consensus 2 ~~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-~~~~~siH~HG~~~~--~~~DG~~- 75 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNT-MDVRASLHVHGLDYE--ISSDGTA- 75 (276)
T ss_dssp --CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT-
T ss_pred CCcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEEC-CCCCccEeecCcccC--CccCCCc-
Confidence 3578899999999874 334455567789999999999999999999999999 799999999999986 4799999
Q ss_pred CccccCCCCCeEEEEEEcCC-------------CcceeeecCcc------hhhccccEEEEEEEcCCCCCCCCCCCcceE
Q 008038 106 ISQCPINPGETYLYRFKVDK-------------AGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEFN 166 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~-------------~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~ 166 (580)
++||+|+||++++|+|++.+ +||||||||.. .|+.+||+|+|||+++.+. ..|+|++
T Consensus 76 ~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~----~~drE~~ 151 (276)
T 3kw8_A 76 MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV----LPDATHT 151 (276)
T ss_dssp TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC----CCSEEEE
T ss_pred CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc----ccccceE
Confidence 89999999999999999953 79999999963 6899999999999997652 2389999
Q ss_pred EEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEE
Q 008038 167 LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 246 (580)
Q Consensus 167 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlR 246 (580)
|+++|| +|||+.+. ..+.++++.|++||||
T Consensus 152 l~l~~~--------------------------~iNG~~~~------------------------~~p~i~v~~G~~vri~ 181 (276)
T 3kw8_A 152 IVFNDM--------------------------TINNRKPH------------------------TGPDFEATVGDRVEIV 181 (276)
T ss_dssp EEEETT--------------------------EETTCCTT------------------------CCCCEEEETTCEEEEE
T ss_pred EEeccc--------------------------ccceeccc------------------------CCCCEEEecCCEEEEE
Confidence 988653 79999764 1246999999999999
Q ss_pred EeecCCceeEEEEEeCeeeEEEEECCcccC----ceeeeeEEEcCCceEEEEEEeCC-CCCcceEEEEeecCCCCCCCCc
Q 008038 247 IASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 247 liNag~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v~~~~-~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
|+|.+.. .+.|||+||.|.+++ ||.... +..+|++.|.|||++++++++++ +.+|.|+++|+..... ....
T Consensus 182 l~N~~~~-~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~--~~GM 257 (276)
T 3kw8_A 182 MITHGEY-YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS--DMGM 257 (276)
T ss_dssp EEEESSC-CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--HTTC
T ss_pred EecCCCc-ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHh--hCCC
Confidence 9999874 899999999999975 775432 46789999999999999999974 2379999999964321 2344
Q ss_pred eEEEEec
Q 008038 322 LTLLNYH 328 (580)
Q Consensus 322 ~ail~y~ 328 (580)
.+.+++.
T Consensus 258 ~g~~~V~ 264 (276)
T 3kw8_A 258 VGLFLVK 264 (276)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 6667666
No 31
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.3e-43 Score=366.41 Aligned_cols=270 Identities=19% Similarity=0.224 Sum_probs=207.2
Q ss_pred cCCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|++++..++ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||.+
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----CCCccCcceeCCcCCCCCCc
Confidence 467889999999998876 669999999999999999999999999999999994 67899999876544444444
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCcc----hhhccccEEEEEEEcCCCC----CCCCCCCcceEEEEeecccC-
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHLG----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR- 175 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~~~d~~~~- 175 (580)
.++ .|.||++++|+|++.++||||||||.. .|+.+||+|+|||++++.. ..|..||+|++|+++||++.
T Consensus 110 ~~~--~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~ 187 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPK 187 (340)
T ss_dssp GGC--CBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCB
T ss_pred cce--EeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeecc
Confidence 444 499999999999999999999999964 7999999999999986531 23567899999999999983
Q ss_pred -chHHHHhhhcCC------CCC--CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEE
Q 008038 176 -SVHEQEVGLSSR------PLR--WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 246 (580)
Q Consensus 176 -~~~~~~~~~~~~------~~~--~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlR 246 (580)
....+ ..+... ... ....++.++|||+.+.. ...+.+++++||++||+
T Consensus 188 ~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------------------~~~~~l~v~~G~r~Rl~ 244 (340)
T 2bw4_A 188 DEAGNY-KKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL----------------------TGDHALTAAVGERVLVV 244 (340)
T ss_dssp CTTSCB-CCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT----------------------SGGGCEEEETTCEEEEE
T ss_pred ccCCcc-cccccccccccchhhHhhcCCCCEEEECCccCCc----------------------cCCCceEcCCCCEEEEE
Confidence 11110 000000 000 02357899999998751 01247999999988877
Q ss_pred EeecCCceeEEEEEeCeeeEEEEECCcccC-ce-eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEE
Q 008038 247 IASTTALASLNLAVKNHKMVVVEADGNYVQ-PF-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL 324 (580)
Q Consensus 247 liNag~~~~~~~~i~gh~~~via~DG~~v~-P~-~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ai 324 (580)
++|++.. ....++++|.|+|++ ||.++. |. .++++.|.||||+||+|++++ +|+|+++|+..... ......++
T Consensus 245 n~~~~~~-~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~--pG~y~~~~h~~~~h-~~~Gm~~~ 319 (340)
T 2bw4_A 245 HSQANRD-TRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PGVYAYVNHNLIEA-FELGAAGH 319 (340)
T ss_dssp EEESSSC-BCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEE
T ss_pred ECCCCCc-cceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC--CeeeEEEcCchHHH-HhCCCEEE
Confidence 7665533 333458999999997 999885 43 589999999999999999997 79999999875211 12345788
Q ss_pred EEecCC
Q 008038 325 LNYHPT 330 (580)
Q Consensus 325 l~y~~~ 330 (580)
++|.+.
T Consensus 320 ~~V~~~ 325 (340)
T 2bw4_A 320 FKVTGE 325 (340)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 999853
No 32
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.5e-43 Score=357.76 Aligned_cols=240 Identities=18% Similarity=0.253 Sum_probs=194.8
Q ss_pred ccCCceEEEEEEEEEEEeCCCC-ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
.+.+.+++|+|.+++.. ++ ..+.++.+||++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||++
T Consensus 24 ~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~-l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNT-TDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ---CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT
T ss_pred ccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEEC-CCCCccEEeCCcccC--CccCCCc
Confidence 46788999999988754 33 23345667999999999999999999999999 799999999999885 6899997
Q ss_pred CCccccCCCCCeEEEEEEcC-------------CCcceeeecCcc------hhhccccEEEEEEEcCCCCCCCCCCCcce
Q 008038 105 SISQCPINPGETYLYRFKVD-------------KAGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEF 165 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~-------------~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~p~~~d~e~ 165 (580)
++||+|+||++++|+|++. ++||||||||.. .|+.+||+|+|||+++.+ ..+|+|+
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----~~~d~e~ 172 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----LLPKRQF 172 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc----cCccccc
Confidence 7899999999999999984 689999999953 367899999999998754 3468999
Q ss_pred EEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEE
Q 008038 166 NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRL 245 (580)
Q Consensus 166 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rl 245 (580)
+|++.+| .+||+..+ ..+.++++.||+|||
T Consensus 173 ~l~~~~~--------------------------~~Ng~~~~------------------------~~p~l~v~~Ge~Vr~ 202 (299)
T 3t9w_A 173 TVVFNDM--------------------------MINNRAHH------------------------DAPTFEANLGERVEW 202 (299)
T ss_dssp EEEEETT--------------------------EETTCCTT------------------------CCCEEEEETTCEEEE
T ss_pred eeeeeee--------------------------eecCcccc------------------------ccccceecCCCEEEE
Confidence 9998765 36777655 123699999999999
Q ss_pred EEeecCCceeEEEEEeCeeeEEEEECCcccC---ceeeeeEEEcCCceEEEEEEeCC-CCCcceEEEEeecCCCCCCCCc
Q 008038 246 RIASTTALASLNLAVKNHKMVVVEADGNYVQ---PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 246 RliNag~~~~~~~~i~gh~~~via~DG~~v~---P~~~d~v~l~pGeR~dv~v~~~~-~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
||+|++.. .+.|||+||.|.|+..|+.... +..+|++.|.||||++++|...+ +.+|.|.++|+..... ....
T Consensus 203 ~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~--~~GM 279 (299)
T 3t9w_A 203 IAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHS--DMGM 279 (299)
T ss_dssp EEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHH--HTTC
T ss_pred EEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHH--hcCC
Confidence 99999865 6999999999999998887663 34689999999999999987543 2479999999975432 2344
Q ss_pred eEEEEecC
Q 008038 322 LTLLNYHP 329 (580)
Q Consensus 322 ~ail~y~~ 329 (580)
.+++.+.+
T Consensus 280 ~~~f~V~~ 287 (299)
T 3t9w_A 280 AGMFLVRN 287 (299)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 66677663
No 33
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=4.9e-43 Score=356.84 Aligned_cols=239 Identities=19% Similarity=0.243 Sum_probs=197.1
Q ss_pred ccCCceEEEEEEEEEEEeCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
.+...+++++|.+++ -++|.. ..++..||++|||+||+++||+|+|+|+|+ +++++||||||+++. +.+||++
T Consensus 8 p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 8 PAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENT-MDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEEC-CCCCccEeecCCcCC--ccCCCCc
Confidence 456788999998753 345644 446778999999999999999999999999 799999999999985 5799998
Q ss_pred CCccccCCCCCeEEEEEEcC-------------CCcceeeecCcc------hhhccccEEEEEEEcCCCCCCCCCCCcce
Q 008038 105 SISQCPINPGETYLYRFKVD-------------KAGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEF 165 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~-------------~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~p~~~d~e~ 165 (580)
.+||+|+||++++|+|++. ++||||||||.. .|+.+||+|+|||+++.+ ..+|+|+
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~d~e~ 156 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDRTH 156 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----BCCSEEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc----ccccccc
Confidence 5899999999999999863 679999999954 347899999999998754 3569999
Q ss_pred EEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEE
Q 008038 166 NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRL 245 (580)
Q Consensus 166 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rl 245 (580)
+|+++|| ++||+..++ .+.+.++.||+|||
T Consensus 157 ~l~~~d~--------------------------t~Ng~~~~~------------------------~~~l~v~~Ge~vr~ 186 (313)
T 3tas_A 157 TIVFNDM--------------------------TINNRPAHT------------------------GPDFEATVGDRVEF 186 (313)
T ss_dssp EEEEETT--------------------------EETTCCTTC------------------------CCCEEEETTCEEEE
T ss_pred eeeccch--------------------------hcccCCccc------------------------ccccccccCCEEEE
Confidence 9999987 356665541 12589999999999
Q ss_pred EEeecCCceeEEEEEeCeeeEEEEECCccc---CceeeeeEEEcCCceEEEEEEeCC-CCCcceEEEEeecCCCCCCCCc
Q 008038 246 RIASTTALASLNLAVKNHKMVVVEADGNYV---QPFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 246 RliNag~~~~~~~~i~gh~~~via~DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~-~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
||+|++. ..+.|||+||.|+|++.||... .|..+|++.|.||||++++|.+.+ +.+|.|.++||..... ....
T Consensus 187 ~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~--~~GM 263 (313)
T 3tas_A 187 VMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS--DMGM 263 (313)
T ss_dssp EEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--HTTC
T ss_pred EEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH--HCCC
Confidence 9999995 4799999999999999998766 477899999999999999998753 2379999999964432 2345
Q ss_pred eEEEEec
Q 008038 322 LTLLNYH 328 (580)
Q Consensus 322 ~ail~y~ 328 (580)
.+++.+.
T Consensus 264 ~~~f~V~ 270 (313)
T 3tas_A 264 VGLFLVK 270 (313)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 6777776
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.1e-41 Score=346.07 Aligned_cols=215 Identities=15% Similarity=0.242 Sum_probs=160.9
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC------Cc--cccCCCCCeEEEEE
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS------IS--QCPINPGETYLYRF 121 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~------~~--q~~i~pG~~~~y~f 121 (580)
+..+++| ++|||+|+|++||+|+|+|+|. +.++++|||||++.. +.+||++. ++ ||+|+||++++|+|
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~-l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f 124 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNK-AHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEW 124 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEEC-SSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEEC-CCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEE
Confidence 3456789 5899999999999999999999 789999999999953 34555554 33 79999999999999
Q ss_pred EcCC----------CcceeeecCcch--hhccccEEEEEEEcCCC---CCCCCCCCcceEEEEeecccCchHHHHhhhcC
Q 008038 122 KVDK----------AGTYFYHGHLGM--QRSAGLYGSLIVDVADG---EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 186 (580)
Q Consensus 122 ~~~~----------~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~---~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~ 186 (580)
++.+ +||||||||... |+.+||+|+|||+++.+ ...+..+|+|++|+++||..... .
T Consensus 125 ~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~------~-- 196 (306)
T 1sdd_A 125 IISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS------W-- 196 (306)
T ss_dssp ECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS------S--
T ss_pred EeCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc------c--
Confidence 9943 379999999765 78999999999998753 22344568999999999742110 0
Q ss_pred CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCeee
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKM 265 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~ 265 (580)
+...++.++|||+.+.+ .+.+++++||+|||||+|++.. ..+.|+|+||.|
T Consensus 197 ----~~~~~~~~~ING~~~~~------------------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~ 248 (306)
T 1sdd_A 197 ----NQTSSLMYTVNGYVNGT------------------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVL 248 (306)
T ss_dssp ----SCCCCEEECSSSCCSSC------------------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTC
T ss_pred ----ccCCCcceeeCCEecCC------------------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEe
Confidence 01246789999998641 1358899999999999999976 568899999999
Q ss_pred EEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 266 VVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 266 ~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
.+ ||. .+|++.|.||||+||+|++++ +|.|+++|+....
T Consensus 249 ~~---dG~-----~~dtv~l~pger~~v~~~~~~--pG~~~~hch~~~H 287 (306)
T 1sdd_A 249 EQ---NHH-----KISAITLVSATSTTANMTVSP--EGRWTIASLIPRH 287 (306)
T ss_dssp EE---TTE-----ECSCCCEETTCCBC----------CCCCCBCCSTTT
T ss_pred ee---CCE-----EcceEEECCCcEEEEEEEcCC--CeEEEEEeCChHH
Confidence 76 884 589999999999999999987 7999999996543
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.8e-38 Score=340.42 Aligned_cols=266 Identities=22% Similarity=0.286 Sum_probs=212.2
Q ss_pred CCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCCC
Q 008038 28 GSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
.+.+++|+|++....... +|....+|+|||++|||+|++++||+++|+|+|.+. ...++|||||+. .+||++.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCc
Confidence 345678888877666554 688899999999999999999999999999999953 368999999984 3699886
Q ss_pred CccccCCCCCeEEEEEEcCCCcceeeecCcc---hhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHh
Q 008038 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHLG---MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEV 182 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~ 182 (580)
.+ .|.||++++|.|++.++||||||||.. .|...||+|+|+|+++.. .| .+|+|++++++||++........
T Consensus 235 ~~--~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P-~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 235 FT--QTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP-QVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp GC--CBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC-CCSEEEEEEEEEECBSSCTTCCE
T ss_pred cE--EeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC-CCCeeEEEEecccccCCcccccc
Confidence 54 499999999999999999999999963 688899999999998643 23 57889999999998753211000
Q ss_pred --hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE
Q 008038 183 --GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 260 (580)
Q Consensus 183 --~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i 260 (580)
.+..... ....++.++|||+.++++. ...+++++|++|||||+|++....+.|||
T Consensus 310 ~~~~~~~~~-~~~~~~~~~iNG~~~~~~~----------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hl 366 (447)
T 2dv6_A 310 EQEMDYEKL-INEKPEYFLFNGSVGSLTR----------------------SHPLYASVGETVRIFFGVGGPNFTSSFHV 366 (447)
T ss_dssp ECCBBHHHH-HTTCCSEEEETTSTTCCCC----------------------CCCEEECTTCEEEEEEEEEESSCCEEEEE
T ss_pred cccCChHHh-hccCCCEEEECCcccCCCC----------------------CcceEECCCCEEEEEEEeCCCCceEeEEE
Confidence 0000000 0225688999999887211 12689999999999999999878899999
Q ss_pred eCeeeEEEEECCcccCce--eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 261 KNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 261 ~gh~~~via~DG~~v~P~--~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
+||.|+||+.||.+++|. .+|++.|.||||++|+|++++ +|.|+|+|+..... .....++++|.+.
T Consensus 367 hGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~--pG~~~~hch~~~h~--~~Gm~~~~~v~~~ 434 (447)
T 2dv6_A 367 IGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR--AGRYILVDHALSRL--EHGLVGFLNVDGP 434 (447)
T ss_dssp ETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCS--CEEEEEEESSGGGG--GGTCCEEEEECSC
T ss_pred cCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCC--CEEEEEEecCcCcc--ccCCEEEEEEeCC
Confidence 999999999999998654 589999999999999999987 79999999976542 2345789999743
No 36
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=3.2e-39 Score=360.65 Aligned_cols=262 Identities=16% Similarity=0.185 Sum_probs=189.2
Q ss_pred CCceEEEEEEEEEEEeC--CCC------------ceeEE--EEE----------------cCCCCCCeEEecCCCEEEEE
Q 008038 28 GSKTRHYKWEVEYMFWS--PDC------------KESIV--MGI----------------NGQFPGPTIRARAGDTIAVE 75 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~--~~g------------~~~~~--~~~----------------NG~~pgP~l~v~~Gd~v~v~ 75 (580)
.+++|+|=+.+++..+. |.| +.+++ ..| ++++|||+|||++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 46788898888887654 322 12222 223 44799999999999999999
Q ss_pred EEeCCCCCceeeeeccccccCCCCCCCCCCCc--------cccCCCCCeEEEEEEcCC------Cc----ceeeecCc--
Q 008038 76 LTNKLYTEGVVIHWHGIRQLGTPWADGTASIS--------QCPINPGETYLYRFKVDK------AG----TYFYHGHL-- 135 (580)
Q Consensus 76 v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~--------q~~i~pG~~~~y~f~~~~------~G----t~wYH~H~-- 135 (580)
|+|. +.++++|||||+++. +++||+|+++ ||+|+||++++|+|++.+ +| |||||||.
T Consensus 83 ~~N~-l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~ 159 (647)
T 1sdd_B 83 FKNL-ASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNP 159 (647)
T ss_dssp ECCC-SSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSH
T ss_pred EEEC-CCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCC
Confidence 9999 789999999999985 6899999876 999999999999999944 58 99999997
Q ss_pred chhhccccEEEEEEEcCCCCCC--CCC-CCcceEEEEe------ecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCC
Q 008038 136 GMQRSAGLYGSLIVDVADGEKE--PFH-YDGEFNLLLS------DWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQF 206 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~~~~~~~~--p~~-~d~e~~l~~~------d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~ 206 (580)
..|+.+||+|+|||+++..... ... .++|++|+++ ||+++...... +......+...++.++|||+.++
T Consensus 160 ~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~iNG~~~~ 237 (647)
T 1sdd_B 160 EKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRS--WRRASSEVKNSHEFHAINGMIYN 237 (647)
T ss_dssp HHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSC
T ss_pred cccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccc--cccCCcchhhcCceeccCCEecC
Confidence 4689999999999999765211 112 3689999999 78876543211 11111112345789999999863
Q ss_pred CccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCce-eEEEEEeCeeeEEEEECCcccCceeeeeEEE
Q 008038 207 NCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDI 285 (580)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~v~l 285 (580)
.+.+++++|++|||||+|++... .+.|||+||.|+|++.|| ..++++.|
T Consensus 238 -------------------------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l 287 (647)
T 1sdd_B 238 -------------------------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPL 287 (647)
T ss_dssp -------------------------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEE
T ss_pred -------------------------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEE
Confidence 12689999999999999999764 799999999999998886 47899999
Q ss_pred cCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEec
Q 008038 286 YSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH 328 (580)
Q Consensus 286 ~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~ 328 (580)
.||||+||+|++++ +|.|.|+|+..... .....+++.+.
T Consensus 288 ~pg~r~~v~~~~~~--pG~w~~hch~~~h~--~~Gm~~~~~V~ 326 (647)
T 1sdd_B 288 LPGSFKTLEMKASK--PGWWLLDTEVGEIQ--RAGMQTPFLIV 326 (647)
T ss_dssp CTTEEEEEEEECCS--SEEEEEECCCHHHH--TTTCEEEEEEE
T ss_pred CCCeEEEEEEEecc--ceEeecccCccccc--ccccccceeee
Confidence 99999999999987 79999999964332 23345555554
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.2e-39 Score=365.99 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=196.4
Q ss_pred cCCceEEEEEEEEEEEe--CCCCc----------------eeEEE------EEcC-----------CCCCCeEEecCCCE
Q 008038 27 YGSKTRHYKWEVEYMFW--SPDCK----------------ESIVM------GING-----------QFPGPTIRARAGDT 71 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~--~~~g~----------------~~~~~------~~NG-----------~~pgP~l~v~~Gd~ 71 (580)
....+|+|.|.+++..+ +|++. .+.++ +|++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 36789999999999874 57653 22222 2333 68999999999999
Q ss_pred EEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcC----------CCcceeeecCcch--hh
Q 008038 72 IAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD----------KAGTYFYHGHLGM--QR 139 (580)
Q Consensus 72 v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~----------~~Gt~wYH~H~~~--~~ 139 (580)
|+|+|+|. ++.+++|||||+++..+.+ ||+++ +||+|+||++|+|+|++. ++||||||||+.. |+
T Consensus 209 v~v~~~N~-l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~ 285 (770)
T 2r7e_B 209 IMVTFRNQ-ASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDV 285 (770)
T ss_dssp EEEEEECC-SSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHH
T ss_pred EEEEEEEC-CCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHH
Confidence 99999999 7899999999999986543 69998 899999999999999995 8999999999765 78
Q ss_pred ccccEEEEEEEcCCCCCC---CCCCCcceEEEEee------cccCchHHHHh----hhcCCCCCCCCCCceEEeCccCCC
Q 008038 140 SAGLYGSLIVDVADGEKE---PFHYDGEFNLLLSD------WWHRSVHEQEV----GLSSRPLRWIGEPQTLLINGRGQF 206 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~~~~---p~~~d~e~~l~~~d------~~~~~~~~~~~----~~~~~~~~~~~~~~~~liNG~~~~ 206 (580)
.+||+|+|||+++..... +..+|+|++|++++ |+++....... .+......+....+.++|||+.+.
T Consensus 286 ~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~ 365 (770)
T 2r7e_B 286 HSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIMD 365 (770)
T ss_dssp HTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTT
T ss_pred hCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCccccCCccCC
Confidence 999999999999764211 12357899988753 55543211000 000000111223567899999753
Q ss_pred CccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEE
Q 008038 207 NCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDI 285 (580)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l 285 (580)
..+.+++++|++|||||+|++.. ..|.|||+||.|+|++.||. .+|++.|
T Consensus 366 ------------------------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l 416 (770)
T 2r7e_B 366 ------------------------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNL 416 (770)
T ss_dssp ------------------------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEEC
T ss_pred ------------------------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEE
Confidence 11358899999999999999865 47999999999999999974 8899999
Q ss_pred cCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 286 YSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 286 ~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
.||||++|+|++++ +|.|.|+||..
T Consensus 417 ~Pg~~~~v~~~ad~--pG~w~~hcH~~ 441 (770)
T 2r7e_B 417 YPGVFETVEMLPSK--AGIWRVECLIG 441 (770)
T ss_dssp CTTCCCEEEECCSS--CBCCCBCCCSH
T ss_pred CCCeEEEEEEEeCC--CCceEEEeccc
Confidence 99999999999987 89999999864
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.8e-36 Score=338.40 Aligned_cols=217 Identities=20% Similarity=0.278 Sum_probs=170.7
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCC-----CCCCCccccCCCCCeEEEEEEc-CCCc----
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWAD-----GTASISQCPINPGETYLYRFKV-DKAG---- 127 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~D-----G~~~~~q~~i~pG~~~~y~f~~-~~~G---- 127 (580)
.+|||+||+++||+|+|+|+|+ ++.++||||||+++. ++++| |+++++||+|+||++|+|+|++ +++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~-l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQ-ASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECC-SSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred CCCCCeEEEECCCEEEEEEEeC-CCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 5899999999999999999999 789999999999985 46766 4567789999999999999999 4444
Q ss_pred -----ceeeecCcch--hhccccEEEEEEEcCCCC---CCCCCCCcceEEEEee------cccCchHHHHhhhcCCCCC-
Q 008038 128 -----TYFYHGHLGM--QRSAGLYGSLIVDVADGE---KEPFHYDGEFNLLLSD------WWHRSVHEQEVGLSSRPLR- 190 (580)
Q Consensus 128 -----t~wYH~H~~~--~~~~Gl~G~liV~~~~~~---~~p~~~d~e~~l~~~d------~~~~~~~~~~~~~~~~~~~- 190 (580)
|||||||... |+.+||+|+|||+++.+. ..+..+|+|++|++++ |++...... +...+..
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~---~~~~p~~v 602 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQR---FLPNPAGV 602 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHH---HSSSSSCS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhh---cccCchhc
Confidence 9999999654 678999999999987531 1234568999999964 544322111 1100100
Q ss_pred ------CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCe
Q 008038 191 ------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNH 263 (580)
Q Consensus 191 ------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh 263 (580)
+......++|||+.+.+ . .+.+++||+|||||+|+|.. ..|.|||+||
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~~------------------------~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh 657 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFDS------------------------L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGY 657 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSSC------------------------C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSS
T ss_pred ccccccccccCceeeecCcCCCC------------------------C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCc
Confidence 00112357899997541 1 27899999999999998764 4689999999
Q ss_pred eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 264 ~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
.|+|+ |..+|+|.|.||||++|+|++++ +|.|.++||....
T Consensus 658 ~f~v~--------~~~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH~~~H 698 (742)
T 2r7e_A 658 TFKHK--------MVYEDTLTLFPFSGETVFMSMEN--PGLWILGCHNSDF 698 (742)
T ss_dssp CCCCB--------SSSBCSSCCCCCSSEECCEECCC--CCCSCCEECCCST
T ss_pred EEEEe--------ccceeEEEECCCcEEEEEEEcCC--CeEEEEEeCCchH
Confidence 99986 56889999999999999999987 7999999997654
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=6e-30 Score=257.38 Aligned_cols=218 Identities=14% Similarity=0.166 Sum_probs=158.0
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
|+|++++|+++++|+.|.... .+.+|++|.. ..+.||.+. ++...|.|||++++.+++++ +|+||+|++..
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~--~Gt~~yH~H~~ 136 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP--FGTHLYHCHQS 136 (288)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS--CEEEEEECCCS
T ss_pred CcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC--CccEEEEecCc
Confidence 489999999999999998754 7899999975 457899853 24467999999999999965 89999999874
Q ss_pred CCCC-CCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeec-C--Ce
Q 008038 313 GRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-N--GF 388 (580)
Q Consensus 313 ~~~~-~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~-~--~~ 388 (580)
.... ......+.|.+.+.... + ..++++.+....... + ..
T Consensus 137 ~~~~~~~~Gl~G~liV~~~~~~----------~--------------------------~~d~e~~l~~~d~~~~~g~~~ 180 (288)
T 3gdc_A 137 PLAPHIAKGLYGGFIVEPKEGR----------P--------------------------PADDEMVMVMNGYNTDGGDDN 180 (288)
T ss_dssp SHHHHHHTTCEEEEEEECSSCC----------C--------------------------CCSEEEEEEEEEECCSSTTCC
T ss_pred chHHHHhCcCeEEEEEeCCccC----------C--------------------------CCcceEEEEEeeEecCCCCCc
Confidence 3100 11233444444421100 0 013444443332111 1 13
Q ss_pred EEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCC
Q 008038 389 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 468 (580)
Q Consensus 389 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~ 468 (580)
..|.|||+.|.. ..+ .+.++.|++|+|+|.|.+..
T Consensus 181 ~~~~iNG~~~~~-------------------~~~------------------------~l~v~~Ge~vr~~l~N~g~~-- 215 (288)
T 3gdc_A 181 EFYSVNGLPFHF-------------------MDF------------------------PVKVKQHELVRIHLINVLEY-- 215 (288)
T ss_dssp SEEEETTSTTHH-------------------HHS------------------------CEEEETTCCEEEEEEECCCS--
T ss_pred ceEEECcccccc-------------------cCc------------------------ccccCCCCEEEEEEEeCCCC--
Confidence 468889876521 001 17889999999999998743
Q ss_pred CCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEE
Q 008038 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 548 (580)
Q Consensus 469 ~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~ 548 (580)
...|||||||+.|+|++.+.. +..+.++||+.|+||+++.|+|++++||.|+||||+++|++.|||+
T Consensus 216 --~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~ 282 (288)
T 3gdc_A 216 --DPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMG 282 (288)
T ss_dssp --SSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEE
T ss_pred --CcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCE
Confidence 115999999999999874321 1235899999999999999999999999999999999999999999
Q ss_pred EEecc
Q 008038 549 VLALG 553 (580)
Q Consensus 549 ~~~~~ 553 (580)
.|.|.
T Consensus 283 ~~~V~ 287 (288)
T 3gdc_A 283 FFEVS 287 (288)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=8.1e-29 Score=254.95 Aligned_cols=219 Identities=21% Similarity=0.309 Sum_probs=149.8
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEE---ECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE---ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via---~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
|+|++++|+++|+||+|.... .+ +|+.|.+.+.+ .||.+. ++...|.||||+++.+++++ +|+||+|+
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~--~Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR--IGTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC--CEEEEEEe
Confidence 389999999999999999854 34 45555566665 499852 34467999999999999975 89999999
Q ss_pred eecCCCCCC-CCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee-----
Q 008038 310 GVRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN----- 383 (580)
Q Consensus 310 ~~~~~~~~~-~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~----- 383 (580)
+........ ....+.+.+.+.... . ++. ..++++.+.....
T Consensus 106 H~~~~~q~~~~Gl~G~liV~p~~~~-----~---~~~-------------------------~~d~e~~l~l~d~~~~~~ 152 (339)
T 2zwn_A 106 HVNVNEHVGVRGMWGPLIVDPKQPL-----P---IEK-------------------------RVTKDVIMMMSTWESAVA 152 (339)
T ss_dssp CSSHHHHTTTSCCEEEEEEECSSCC-----T---TGG-------------------------GCSEEEEEEEEEECGGGT
T ss_pred cCCchhhhhcCCceEeEEecCCCcc-----c---ccc-------------------------cCCceEEEEeeheecccc
Confidence 863211011 222333433321110 0 000 0011111111100
Q ss_pred --------ecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcE
Q 008038 384 --------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 455 (580)
Q Consensus 384 --------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 455 (580)
.......|.|||+.+.. ...+.++.|++
T Consensus 153 ~~~~~~g~~~~~~~~~~ING~~~~~--------------------------------------------~~~~~v~~G~~ 188 (339)
T 2zwn_A 153 DKYGEGGTPMNVADYFSVNAKSFPL--------------------------------------------TQPLRVKKGDV 188 (339)
T ss_dssp TCTTCCCSTTSCCCEEEETTBCTTS--------------------------------------------SCCEEECTTCE
T ss_pred cccCCCCCCccccceEEEccccCCC--------------------------------------------cccEEECCCCE
Confidence 00012356677754310 11278899999
Q ss_pred EEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEe
Q 008038 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFH 535 (580)
Q Consensus 456 v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~H 535 (580)
++|+|+|.+.. .||||||||+|+|++..+.. +.+|.++||+.|+||+++.|+|++++||.|++|
T Consensus 189 vrlrliN~~~~------~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~h 252 (339)
T 2zwn_A 189 VKIRFFGAGGG------IHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFH 252 (339)
T ss_dssp EEEEEEECSSS------CEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEE
T ss_pred EEEEEEeCCCc------eEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEE
Confidence 99999998866 89999999999999984321 123678999999999999999999999999999
Q ss_pred eecchh------hhcccEEEEecc
Q 008038 536 CHIEPH------FHIGMGVVLALG 553 (580)
Q Consensus 536 CHil~H------~d~GM~~~~~~~ 553 (580)
||+++| ++.||++++.+.
T Consensus 253 ch~~~H~~~~~~~~~gm~a~l~~~ 276 (339)
T 2zwn_A 253 DHVDTHVTAGGKHPGGPITVIEYD 276 (339)
T ss_dssp ECCGGGSCBTTBSSCSSEEEEEET
T ss_pred EechhhcccccccCCCcEEEEEEC
Confidence 999999 889999999653
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=4.9e-29 Score=253.81 Aligned_cols=220 Identities=17% Similarity=0.228 Sum_probs=154.1
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEE-EEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
|+|++++|+++++|+.|... ..+.+|++|....- .+.||.+. +....|.|||++++.+++++ +|+||+|++.
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~--~Gt~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP--AGTMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC--CEEEEEEccC
Confidence 48999999999999999874 46889999876542 36799853 23457999999999999976 8999999986
Q ss_pred cCCCCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee-------
Q 008038 312 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN------- 383 (580)
Q Consensus 312 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~------- 383 (580)
...... .....+.|.+.+.... + .+. ..++++.+.....
T Consensus 107 ~~~~~~~~~Gl~G~lIV~~~~~~-------~-~~~-------------------------~~d~e~~l~l~dw~~~~~~~ 153 (318)
T 3g5w_A 107 NVNEHVTMRGMWGPLIVEPKNPL-------P-IEK-------------------------TVTKDYILMLSDWVSSWANK 153 (318)
T ss_dssp SHHHHHHHSCCEEEEEEECSSCC-------H-HHH-------------------------TCCEEEEEEEEEECGGGTTC
T ss_pred ChhhhhccCCCEEEEEEcCCCcc-------c-ccc-------------------------cccceeEEEEEeeccccccc
Confidence 321100 1223344444422110 0 000 0011111111100
Q ss_pred ------ecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEE
Q 008038 384 ------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 457 (580)
Q Consensus 384 ------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 457 (580)
.......|.|||+.|.. . ..+.++.|++++
T Consensus 154 ~~~~~~~~~~~d~~~ING~~~~~--------------------~------------------------~~l~v~~G~~vr 189 (318)
T 3g5w_A 154 PGEGGIPGDVFDYYTINAKSFPE--------------------T------------------------QPIRVKKGDVIR 189 (318)
T ss_dssp TTCCCCTTCCCCEEEETTBCBTS--------------------S------------------------CCEEECTTCEEE
T ss_pred cccCCCCCCcCcEEEEcCcCCCC--------------------C------------------------ccEEeCCCCEEE
Confidence 00012357888875410 0 127889999999
Q ss_pred EEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeee
Q 008038 458 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 537 (580)
Q Consensus 458 ~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCH 537 (580)
|+|.|.+.. .||||||||.|+|+++.... +.+|.++||+.|+||+++.|+|+++|||.|+||||
T Consensus 190 lrliN~~~~------~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH 253 (318)
T 3g5w_A 190 LRLIGAGDH------VHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDH 253 (318)
T ss_dssp EEEEECSSS------CEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEES
T ss_pred EEEEeCCCc------eEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEec
Confidence 999998866 89999999999999984321 12467899999999999999999999999999999
Q ss_pred cchhhh------cccEEEEec
Q 008038 538 IEPHFH------IGMGVVLAL 552 (580)
Q Consensus 538 il~H~d------~GM~~~~~~ 552 (580)
+++|++ .|||+++.+
T Consensus 254 ~~~H~~~g~~~~~Gm~~~i~~ 274 (318)
T 3g5w_A 254 VDTHTTNGDKPDGGIMTTIEY 274 (318)
T ss_dssp SGGGSCBTTBSSCBSEEEEEE
T ss_pred cHHHhhccCcCCCCCEEEEEE
Confidence 999998 689999965
No 42
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=3.5e-28 Score=245.41 Aligned_cols=217 Identities=18% Similarity=0.277 Sum_probs=154.9
Q ss_pred CCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCC----------
Q 008038 230 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ---------- 299 (580)
Q Consensus 230 ~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~---------- 299 (580)
.+.|+|++++|++++++|.|.... ..++|.+|..+.. +.||.++. .-.|.|||+++..++++.
T Consensus 55 ~PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~-~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~ 127 (299)
T 3t9w_A 55 VPGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYDV-NSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWA 127 (299)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred ccCceEEEECCeEEEEEEEECCCC-CccEEeCCcccCC-ccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCC
Confidence 345689999999999999998654 6889999876553 67897542 124799999999998863
Q ss_pred -CCCcceEEEEeecCCCC---C-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcce
Q 008038 300 -DPSYNYWISAGVRGRKP---A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 374 (580)
Q Consensus 300 -~~~g~y~l~~~~~~~~~---~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r 374 (580)
.+.|+||++++...... + ....++.|.+.+... ...++
T Consensus 128 ~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~-------------------------------------~~~d~ 170 (299)
T 3t9w_A 128 EGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD-------------------------------------LLPKR 170 (299)
T ss_dssp CCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------------------------------------CCCSE
T ss_pred CCCceeEEEecCCcccccchhhhcccccceEEEecccc-------------------------------------cCccc
Confidence 14699999998644321 1 112234444331100 01246
Q ss_pred EEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCc
Q 008038 375 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 454 (580)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 454 (580)
++.+.+. .|.+|++.+. +.+ .+.++.|+
T Consensus 171 e~~l~~~--------~~~~Ng~~~~--------------------~~p------------------------~l~v~~Ge 198 (299)
T 3t9w_A 171 QFTVVFN--------DMMINNRAHH--------------------DAP------------------------TFEANLGE 198 (299)
T ss_dssp EEEEEEE--------TTEETTCCTT--------------------CCC------------------------EEEEETTC
T ss_pred cceeeee--------eeeecCcccc--------------------ccc------------------------cceecCCC
Confidence 6655442 3678876441 111 27889999
Q ss_pred EEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEE---EEEEecCcee
Q 008038 455 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTA---LRFVADNPGA 531 (580)
Q Consensus 455 ~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~---irf~adnpG~ 531 (580)
+|+|+|.|.+.. .||||||||.|+|+..+.... ....+.++||+.|.||+... ++|+++|||.
T Consensus 199 ~Vr~~liN~~~~------~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 199 RVEWIAIGHGSN------FHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp EEEEEEEEESSC------CCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEE
T ss_pred EEEEEEEecccc------ceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCee
Confidence 999999998876 899999999999987644322 22345689999999997664 4556689999
Q ss_pred eEEeeecchhhhcccEEEEeccccc
Q 008038 532 WAFHCHIEPHFHIGMGVVLALGVET 556 (580)
Q Consensus 532 w~~HCHil~H~d~GM~~~~~~~~~~ 556 (580)
|+|||||++|++.|||++|.|...+
T Consensus 265 w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 265 WMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EEEEcCCHHHHhcCCeEEEEEECCC
Confidence 9999999999999999999886543
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=6.5e-28 Score=241.03 Aligned_cols=215 Identities=17% Similarity=0.285 Sum_probs=158.3
Q ss_pred CceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCC----------
Q 008038 231 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD---------- 300 (580)
Q Consensus 231 ~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~---------- 300 (580)
..|+|+++.|+++++++.|.. ...+++|.+|..+.. +.||.+ +..-.|.||++++..+++++.
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 446899999999999999986 457899999987654 579986 233568999999999999752
Q ss_pred -CCcceEEEEeecCCC---CC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceE
Q 008038 301 -PSYNYWISAGVRGRK---PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 375 (580)
Q Consensus 301 -~~g~y~l~~~~~~~~---~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~ 375 (580)
..|+||+|++..... .+ ....++.|.+.+... . ..+++
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------------------------------~----~~drE 149 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------------------------------V----LPDAT 149 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------------------------C----CCSEE
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCCC---------------------------------c----ccccc
Confidence 257899999864321 11 112234444432110 0 01456
Q ss_pred EEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcE
Q 008038 376 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 455 (580)
Q Consensus 376 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 455 (580)
+.+.+. .|.|||+.+. ..+ .+.++.|++
T Consensus 150 ~~l~l~--------~~~iNG~~~~--------------------~~p------------------------~i~v~~G~~ 177 (276)
T 3kw8_A 150 HTIVFN--------DMTINNRKPH--------------------TGP------------------------DFEATVGDR 177 (276)
T ss_dssp EEEEEE--------TTEETTCCTT--------------------CCC------------------------CEEEETTCE
T ss_pred eEEEec--------ccccceeccc--------------------CCC------------------------CEEEecCCE
Confidence 555432 3789998652 111 288999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec---Cceee
Q 008038 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPGAW 532 (580)
Q Consensus 456 v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad---npG~w 532 (580)
|+|+|+|.+.+ .|||||||+.|++++. |.++. ....+.++||+.|+||+++.++|+++ |||.|
T Consensus 178 vri~l~N~~~~------~Hp~HlHG~~f~v~~~--G~~~~------p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 178 VEIVMITHGEY------YHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEecCCCc------ceeEEEccceeEEecc--CccCC------CcccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 99999998766 8999999999999753 33321 01124689999999999999999997 89999
Q ss_pred EEeeecchhhhcccEEEEecccc
Q 008038 533 AFHCHIEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 533 ~~HCHil~H~d~GM~~~~~~~~~ 555 (580)
+||||+++|++.|||++|.|.+.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECT
T ss_pred EEECCCchHhhCCCeEEEEEeCC
Confidence 99999999999999999987653
No 44
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=8.2e-27 Score=237.18 Aligned_cols=214 Identities=17% Similarity=0.272 Sum_probs=154.1
Q ss_pred CceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCC-----------
Q 008038 231 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ----------- 299 (580)
Q Consensus 231 ~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~----------- 299 (580)
+.|+|+++.|++++++|.|... ...++|.+|..+.. +.||.+. ..-.|.||++++..+++..
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 4568999999999999999864 46889999876543 5688753 1224899999999988752
Q ss_pred CCCcceEEEEeecCCCCC----CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceE
Q 008038 300 DPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 375 (580)
Q Consensus 300 ~~~g~y~l~~~~~~~~~~----~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~ 375 (580)
.+.|+||+|++....... ....++.|.+.+... ...|++
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-------------------------------------~~~d~e 155 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------------------------------------VLPDRT 155 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------------------------------------BCCSEE
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc-------------------------------------cccccc
Confidence 135899999986443210 112234444431100 012466
Q ss_pred EEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcE
Q 008038 376 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 455 (580)
Q Consensus 376 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 455 (580)
+.+.+. .|++|+..+. ..++ +.++.|++
T Consensus 156 ~~l~~~--------d~t~Ng~~~~--------------------~~~~------------------------l~v~~Ge~ 183 (313)
T 3tas_A 156 HTIVFN--------DMTINNRPAH--------------------TGPD------------------------FEATVGDR 183 (313)
T ss_dssp EEEEEE--------TTEETTCCTT--------------------CCCC------------------------EEEETTCE
T ss_pred ceeecc--------chhcccCCcc--------------------cccc------------------------cccccCCE
Confidence 655543 2678876431 1111 78899999
Q ss_pred EEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe---cCceee
Q 008038 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA---DNPGAW 532 (580)
Q Consensus 456 v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a---dnpG~w 532 (580)
|+|+|.|.+.+ .||||||||.|+|+..+... .....+.++||+.|.|++.+.++|.+ +|||.|
T Consensus 184 vr~~liN~g~~------~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w 249 (313)
T 3tas_A 184 VEFVMITHGEY------YHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAW 249 (313)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEeccccc------ceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeE
Confidence 99999998877 89999999999998764321 11234689999999999998877765 689999
Q ss_pred EEeeecchhhhcccEEEEeccc
Q 008038 533 AFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 533 ~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+|||||++|++.|||++|.|..
T Consensus 250 ~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 250 MYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEECSHHHHHTTCEEEEEEEC
T ss_pred EEEeCChHHHHCCCeEEEEEEC
Confidence 9999999999999999997754
No 45
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=1.1e-25 Score=228.33 Aligned_cols=227 Identities=12% Similarity=0.121 Sum_probs=130.9
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC----ceeeeeEEEcCCceEEEEEEeCCCC-------
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQDP------- 301 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v~~~~~~------- 301 (580)
|+|++++|+++++||.|... ..+++|.||..+.. +.||.+.. +...+...|.||||+++.+++++..
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 38999999999999999764 56788888877433 57888652 2233357799999999999997632
Q ss_pred -CcceEEEEeecCCC--CCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEE
Q 008038 302 -SYNYWISAGVRGRK--PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL 378 (580)
Q Consensus 302 -~g~y~l~~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~ 378 (580)
.|+||+|++..... ...+.+ ++|.......... +..+.. + .++...+..... .. .
T Consensus 138 ~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~~~-----~~~~~~-d----~e~~l~~~d~d~-~~-~--------- 195 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLTED-----GTQKMF-E----KQHVLMFAVFDE-SK-S--------- 195 (306)
T ss_dssp SEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBCTT-----SSBSSS-C----CCCCCBCCEEET-TS-S---------
T ss_pred CceEEEEeccCCchhhhccCceE-EEEEccCCCCCcc-----CCcCcc-c----ceEEEEEEeccc-cc-c---------
Confidence 27999999853211 112222 3444332111100 000000 0 000000000000 00 0
Q ss_pred EeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEE
Q 008038 379 LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDV 458 (580)
Q Consensus 379 ~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 458 (580)
........|.|||+.+.. .| .+.++.|++++|
T Consensus 196 ----~~~~~~~~~~ING~~~~~--------------------~p------------------------~l~v~~G~~vrl 227 (306)
T 1sdd_A 196 ----WNQTSSLMYTVNGYVNGT--------------------MP------------------------DITVCAHDHISW 227 (306)
T ss_dssp ----SSCCCCEEECSSSCCSSC--------------------CC------------------------CCCCCCC-----
T ss_pred ----cccCCCcceeeCCEecCC--------------------Cc------------------------ceEEcCCCEEEE
Confidence 000012346777764310 00 166889999999
Q ss_pred EEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeec
Q 008038 459 ILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHI 538 (580)
Q Consensus 459 ~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHi 538 (580)
+|.|.+.. ...|+||+|||.|++ +| ..+||+.|.||+++.|+|++++||.|+||||+
T Consensus 228 rliN~g~~----~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~ 284 (306)
T 1sdd_A 228 HLIGMSSG----PELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLI 284 (306)
T ss_dssp -BBCCCSS----SCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCS
T ss_pred EEEeCCCC----CccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCC
Confidence 99997642 126999999999986 11 35899999999999999999999999999999
Q ss_pred chhhhcccEEEEeccc
Q 008038 539 EPHFHIGMGVVLALGV 554 (580)
Q Consensus 539 l~H~d~GM~~~~~~~~ 554 (580)
++|++.|||++|.+.+
T Consensus 285 ~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 285 PRHFQAGMQAYIDIKN 300 (306)
T ss_dssp TTTGGGTCBCCC----
T ss_pred hHHHhcCCeEEEEEec
Confidence 9999999999998754
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=7.1e-23 Score=228.59 Aligned_cols=241 Identities=15% Similarity=0.190 Sum_probs=144.1
Q ss_pred CCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC---c-eeeeeEEEcCCceEEEEEEeCCCC----
Q 008038 230 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ---P-FEVDDMDIYSGESYSVLLTTNQDP---- 301 (580)
Q Consensus 230 ~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~---P-~~~d~v~l~pGeR~dv~v~~~~~~---- 301 (580)
...|+|++++|+++++||.|... ..+.+|.||.... .+.||.+.. | ..+....|.|||+++..+++++..
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~ 143 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPEN 143 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCS
T ss_pred CcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCC
Confidence 34578999999999999999875 4678888887664 478998642 1 223456799999999999998742
Q ss_pred Cc----ceEEEEeecCCCCCCCCceE-EEEecCCCCCCCCCCCCCCCCCCCCCCcccccccccc------ccCCCCCCCC
Q 008038 302 SY----NYWISAGVRGRKPATPPALT-LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF------ALMGSPKPPT 370 (580)
Q Consensus 302 ~g----~y~l~~~~~~~~~~~~~~~a-il~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~------~~~~~~~~p~ 370 (580)
+| +||+|+|............+ +|.......... +..|. .+ .++...+. +.. ....
T Consensus 144 ~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~-----~~~~~-~~----~e~~l~l~~~d~~~~w~--~~~~- 210 (647)
T 1sdd_B 144 PGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKE-----TNMPV-DM----REFVLLFMVFDEKKSWY--YDKK- 210 (647)
T ss_dssp SSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTT-----SCCCS-SC----CEEEEEEEEEEGGGSSC--CC---
T ss_pred CCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccc-----cCCCC-cc----eeEEEEEEeecCccccc--cccC-
Confidence 47 99999986321111112223 333332111100 00011 00 01110010 000 0000
Q ss_pred CcceEEEEEeeeee-cCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEE
Q 008038 371 NFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 449 (580)
Q Consensus 371 ~~~r~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (580)
....+ ...... ......+.|||+.+. .+.+.
T Consensus 211 -~~~~~--~~~~~~~~~~~~~~~iNG~~~~---------------------------------------------~p~l~ 242 (647)
T 1sdd_B 211 -PTRSW--RRASSEVKNSHEFHAINGMIYN---------------------------------------------LPGLR 242 (647)
T ss_dssp ----------------CCCEEEEETTBSSC---------------------------------------------CCCCE
T ss_pred -ccccc--ccCCcchhhcCceeccCCEecC---------------------------------------------CCCeE
Confidence 00000 000000 001235667766430 01277
Q ss_pred ccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCc
Q 008038 450 LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP 529 (580)
Q Consensus 450 ~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 529 (580)
++.|++++|+|.|.+.. ...||||+|||.|+|++. ++.++||+.|.||+++.|+|++++|
T Consensus 243 v~~G~~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~----------------d~~~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 243 MYEQEWVRLHLLNLGGS----RDIHVVHFHGQTLLENGT----------------QQHQLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp EETTCEEEEEEEECCCT----TCCEEEEETTCCEEECSS----------------SCEEESSEEECTTEEEEEEEECCSS
T ss_pred EcCCCEEEEEEEeCCCC----CcceeEEEcCcEEEEecC----------------CCcccceEEECCCeEEEEEEEeccc
Confidence 88999999999997642 127999999999999865 1357899999999999999999999
Q ss_pred eeeEEeeecchhhhcccEEEEecc
Q 008038 530 GAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 530 G~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|.|+||||+++|++.|||++|.+.
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEE
T ss_pred eEeecccCcccccccccccceeee
Confidence 999999999999999999999874
No 47
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=1.7e-21 Score=199.27 Aligned_cols=235 Identities=14% Similarity=0.092 Sum_probs=149.7
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.|||++++.+++++ +|+||+||+.
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~--~Gt~wyH~h~ 137 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ--PGLYIYHCAV 137 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC--CeEEEEEeCC
Confidence 479999999999999999753 46888888863 5688642 224999999999999987 8999999985
Q ss_pred cCCCCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEE
Q 008038 312 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 390 (580)
Q Consensus 312 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~ 390 (580)
.....+ .....+.+.+.+... +|.++ .++...+...+...... ......+............
T Consensus 138 ~~~~~~~~~Gl~G~~iV~~~~~----------~p~~d-----~e~~l~~~d~~~~~~~~--~~g~~~~~~~~~~~~~~~~ 200 (327)
T 1kbv_A 138 APVGMHIANGMYGLILVEPKEG----------LPKVD-----KEFYIVQGDFYTKGKKG--AQGLQPFDMDKAVAEQPEY 200 (327)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC----------CCCCS-----EEEEEEEEEECBSSCTT--CCEEECBCHHHHHHTCCSE
T ss_pred CChhhhhhcceEEEEEEecCCC----------CCCCc-----eEEEEEeeeeeccCccc--cccccccChhHhccCCCce
Confidence 431111 112233343332110 11111 00000000000000000 0000000000000011235
Q ss_pred EEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCC
Q 008038 391 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 470 (580)
Q Consensus 391 ~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~ 470 (580)
+.|||+.+... ....+.++.|++++|+|.|.+..
T Consensus 201 ~~iNG~~~~~~------------------------------------------~~~~l~v~~G~~vRlRliN~~~~---- 234 (327)
T 1kbv_A 201 VVFNGHVGALT------------------------------------------GDNALKAKAGETVRMYVGNGGPN---- 234 (327)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTEEEEEEEEEEESS----
T ss_pred EEEcCcccCCC------------------------------------------CceeEEeCCCCEEEEEEECCCCC----
Confidence 67777644110 00137889999999999997642
Q ss_pred CCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhh-hcccEEE
Q 008038 471 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF-HIGMGVV 549 (580)
Q Consensus 471 ~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~-d~GM~~~ 549 (580)
..|+||||||.|+|++..++. ..|..+|++.|.||+++.|.|++++||.|++|||+..|. ..||+++
T Consensus 235 -~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~ 302 (327)
T 1kbv_A 235 -LVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQ 302 (327)
T ss_dssp -CCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEE
T ss_pred -CceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEE
Confidence 179999999999999974432 126789999999999999999999999999999999995 8899999
Q ss_pred Eeccc
Q 008038 550 LALGV 554 (580)
Q Consensus 550 ~~~~~ 554 (580)
+.+..
T Consensus 303 l~~~g 307 (327)
T 1kbv_A 303 LKVEG 307 (327)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 97643
No 48
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=6.2e-21 Score=196.62 Aligned_cols=241 Identities=18% Similarity=0.181 Sum_probs=141.8
Q ss_pred eEEEEecCCEEEEEEeecCC-ceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~-~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|+++++|++|... ...|.+++++... +.||.. .. .|.|||++++.+++++ +|+||+|+|.
T Consensus 71 P~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~---~~----~i~PG~~~~y~~~~~~--~Gt~wyH~h~ 138 (340)
T 2bw4_A 71 PLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGA---LT----QVNPGEETTLRFKATK--PGVFVYHCAP 138 (340)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGG---GC----CBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCcc---ce----EeCCCCEEEEEEECCC--CeEEEEEcCC
Confidence 48999999999999999873 2456777776542 223332 21 3999999999999986 8999999996
Q ss_pred cCCC-CC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEE-----EE--eee
Q 008038 312 RGRK-PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLT-----LL--NTQ 382 (580)
Q Consensus 312 ~~~~-~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~-----~~--~~~ 382 (580)
.... .+ .....+.+.+.+...... ....| ..+. .++...+....-........ ..+. +. ...
T Consensus 139 ~~~~~~~~~~Gl~G~~iV~~~~~~~~-~~~~p--~~~d-----~e~~l~l~D~~~~~~~~g~~-~~~~~~~~~~~~~~~~ 209 (340)
T 2bw4_A 139 EGMVPWHVTSGMNGAIMVLPRDGLKD-EKGQP--LTYD-----KIYYVGEQDFYVPKDEAGNY-KKYETPGEAYEDAVKA 209 (340)
T ss_dssp TTCHHHHHHTTCEEEEEEECTBCEEC-TTSCE--ECCS-----EEEEEEEEEECCCBCTTSCB-CCCCSHHHHHHHHHHH
T ss_pred CCchhhHHhCcCEEEEEEccCcCccc-ccCCC--cCcc-----eeEEEeeeeeeeccccCCcc-cccccccccccchhhH
Confidence 4321 01 112233333332111000 00000 0000 00000000000000000000 0000 00 000
Q ss_pred eecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEc
Q 008038 383 NTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN 462 (580)
Q Consensus 383 ~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N 462 (580)
........|.|||+.+... ..+.+.++.|++++|++.|
T Consensus 210 ~~~~~~~~~~iNG~~~~~~------------------------------------------~~~~l~v~~G~r~Rl~n~~ 247 (340)
T 2bw4_A 210 MRTLTPTHIVFNGAVGALT------------------------------------------GDHALTAAVGERVLVVHSQ 247 (340)
T ss_dssp HHTTCCSEEEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEE
T ss_pred hhcCCCCEEEECCccCCcc------------------------------------------CCCceEcCCCCEEEEEECC
Confidence 0000113567777654110 0123889999999988877
Q ss_pred CCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEEEEEEEecCceeeEEeeecc-
Q 008038 463 ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRFVADNPGAWAFHCHIE- 539 (580)
Q Consensus 463 ~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~v~irf~adnpG~w~~HCHil- 539 (580)
.+.. .|++|+|||.|+|+. +|.+. ++. ++||+.|.||+.+.|.|++++||.|+||||++
T Consensus 248 ~~~~------~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~ 309 (340)
T 2bw4_A 248 ANRD------TRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLI 309 (340)
T ss_dssp SSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred CCCc------cceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchH
Confidence 6655 799999999999986 34331 222 47999999999999999999999999999999
Q ss_pred hhhhcccEEEEeccc
Q 008038 540 PHFHIGMGVVLALGV 554 (580)
Q Consensus 540 ~H~d~GM~~~~~~~~ 554 (580)
+|++.|||+.|.+..
T Consensus 310 ~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 310 EAFELGAAGHFKVTG 324 (340)
T ss_dssp HHHTTSCEEEEEEES
T ss_pred HHHhCCCEEEEEECC
Confidence 599999999997643
No 49
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.86 E-value=4.4e-23 Score=231.79 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=149.0
Q ss_pred CCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCC--------
Q 008038 229 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-------- 300 (580)
Q Consensus 229 ~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~-------- 300 (580)
+...|+|+++.|++++++|.|... ..+.+|.||..+....-||.+- ....|.||++++..+++++.
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~ 268 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEF 268 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCC
T ss_pred CCCCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCC
Confidence 345679999999999999999864 4788888887765544358742 13468999999999998732
Q ss_pred CCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEe
Q 008038 301 PSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLN 380 (580)
Q Consensus 301 ~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~ 380 (580)
+.|+||+|+|............|.|.+.+.... .... .+. ..++++.+.+
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~--~~~~---~~~-------------------------~~d~E~vl~~ 318 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTL--NPAH---GRQ-------------------------VTVQEFALFF 318 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECSTTS--CSSS---CCC-------------------------CSSEEEECCC
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCccc--cccc---CCC-------------------------ccceEEEEEE
Confidence 469999999864421111222343444322110 0000 000 0112222111
Q ss_pred eeee----------------------------cCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCccc
Q 008038 381 TQNT----------------------------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDV 432 (580)
Q Consensus 381 ~~~~----------------------------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~ 432 (580)
.... ......|.|||..+
T Consensus 319 ~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~---------------------------------- 364 (770)
T 2r7e_B 319 TIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIM---------------------------------- 364 (770)
T ss_dssp CEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT----------------------------------
T ss_pred eecCccccchhccchhhcccCccccccCCccccccCCccccCCccC----------------------------------
Confidence 1000 00001233333321
Q ss_pred CCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceE
Q 008038 433 MKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTA 512 (580)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv 512 (580)
.....+.++.|++++|+|.|.+.. ...||||||||.|+|++.+ +.++||+
T Consensus 365 ----------~~~~~l~v~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv 414 (770)
T 2r7e_B 365 ----------DTLPGLVMAQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE----------------EYKMALY 414 (770)
T ss_dssp ----------TTCCCCCCCSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS----------------CCEESEE
T ss_pred ----------CCCCCeEEeCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC----------------CceeeEE
Confidence 011237789999999999997632 1279999999999998762 1479999
Q ss_pred EeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 513 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 513 ~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.|+||+++.|+|++++||.|+||||+++|++.|||+.|.|
T Consensus 415 ~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 415 NLYPGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp ECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred EECCCeEEEEEEEeCCCCceEEEecccccccccccccccc
Confidence 9999999999999999999999999999999999999987
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.84 E-value=5.1e-20 Score=189.14 Aligned_cols=90 Identities=21% Similarity=0.157 Sum_probs=72.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC-ccceEEeCCCcEEEEEEEe
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~v~irf~a 526 (580)
+.++.|++++|++.|.+.. .|++++|+|.|.|++ +|.+. ..|. ++||+.|.||+.+.|.|++
T Consensus 227 l~v~~Ger~Rl~n~~~~~~------~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRD------SRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred eEecCCCEEEEEECCCCCc------cccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEc
Confidence 7889999999887776543 445557788888887 34332 1122 5899999999999999999
Q ss_pred cCceeeEEeeecchhh-hcccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHF-HIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~-d~GM~~~~~~~~ 554 (580)
++||.|+||||++.|+ +.|||++|.+..
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 9999999999999997 999999997743
No 51
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.80 E-value=4.9e-19 Score=189.02 Aligned_cols=235 Identities=11% Similarity=0.060 Sum_probs=149.2
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|+++.|+++++||.|.... ..+.+|+||+. ..||... +..|.||+++++.+++++ +|+||+|||.
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~--~Gt~~yH~H~ 127 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN--PGLYIYHCAT 127 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC--CeEEEEecCC
Confidence 379999999999999998642 47889999965 3577642 235999999999999976 8999999974
Q ss_pred cCCCCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEE
Q 008038 312 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 390 (580)
Q Consensus 312 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~ 390 (580)
.....+ .....+.+.+.+... .|.++ .++...+.......... . .....+............
T Consensus 128 ~~~~~~~~~Gl~G~~iv~~~~~----------~~~~d-----~e~~l~l~d~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 190 (442)
T 2zoo_A 128 APVGMHIANGMYGLILVEPKEG----------LAPVD-----REYYLVQGDFYTKGEFG-E-AGLQPFDMAKAIDEDADY 190 (442)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC----------CCCCS-----EEEEEEEEEECBSSCTT-C-CEEECBCHHHHHTTCCSE
T ss_pred CChHHHHhCccEEEEEEeCCCC----------CCCCC-----ceEEEEeeeeeccCccc-c-cccccCChhHhccCCCCE
Confidence 321111 122345555543211 01110 01110110000000000 0 000000000000011234
Q ss_pred EEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCC
Q 008038 391 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 470 (580)
Q Consensus 391 ~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~ 470 (580)
+.|||+.+... ....+.++.|++++|+|.|.+..
T Consensus 191 ~liNG~~~~~~------------------------------------------~~~~l~v~~G~~vrlrliN~~~~---- 224 (442)
T 2zoo_A 191 VVFNGSVGSTT------------------------------------------DENSLTAKVGETVRLYIGNGGPN---- 224 (442)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEEEESS----
T ss_pred EEECCCcCCCC------------------------------------------CCCceEeCCCCEEEEEEEeCCCC----
Confidence 56666543100 00127889999999999996532
Q ss_pred CCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchh-hhcccEEE
Q 008038 471 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH-FHIGMGVV 549 (580)
Q Consensus 471 ~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H-~d~GM~~~ 549 (580)
..|+||+||+.|.|++..++ . ..|.+.|++.|.||+...|.|++++||.|++|||...| ...||+++
T Consensus 225 -~~~~~~i~g~~~~vi~~DG~-~----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~ 292 (442)
T 2zoo_A 225 -LVSSFHVIGEIFDTVYVEGG-S----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAM 292 (442)
T ss_dssp -CCEEEEEETCCBSEEEGGGS-S----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEE
T ss_pred -CceeeEEcCCEEEEEecCCc-c----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEE
Confidence 17999999999999987432 1 12578999999999999999999999999999999999 59999999
Q ss_pred Eeccc
Q 008038 550 LALGV 554 (580)
Q Consensus 550 ~~~~~ 554 (580)
|.+..
T Consensus 293 l~v~~ 297 (442)
T 2zoo_A 293 LKVEG 297 (442)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 96543
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.78 E-value=5.3e-18 Score=174.37 Aligned_cols=221 Identities=20% Similarity=0.214 Sum_probs=140.0
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|+++++|+.|.... ..|.++++++.. .||.. +. . .|.||+++++.+++++ +|+||+|+|.
T Consensus 65 P~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~~y~f~~~~--~Gt~~yH~h~ 132 (336)
T 1oe1_A 65 PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQATLRFKADR--SGTFVYHCAP 132 (336)
T ss_dssp CCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEEEEEEECCC--CeEEEEecCC
Confidence 479999999999999998642 467888888752 23332 21 1 3999999999999976 8999999996
Q ss_pred cCCCC-C-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeec----
Q 008038 312 RGRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI---- 385 (580)
Q Consensus 312 ~~~~~-~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~---- 385 (580)
..... + .....+.+.+.+...... . .+. +...++++.+.......
T Consensus 133 ~~~~~~~~~~Gl~G~liV~~~~~~~~-~--~~~--------------------------~~~~D~e~~l~~~D~~~~~~~ 183 (336)
T 1oe1_A 133 EGMVPWHVVSGMSGTLMVLPRDGLKD-P--QGK--------------------------PLHYDRAYTIGEFDLYIPKGP 183 (336)
T ss_dssp TTCHHHHHHTTCEEEEEEECTTCCBC-T--TSC--------------------------BCCCSEEEEEEEEEECCCBCT
T ss_pred CCchhHHHhCCCeEEEEEecCcCCcc-c--ccC--------------------------cccCCceeEeeeeeeeecccc
Confidence 43210 1 122234343332111000 0 000 00112333222211000
Q ss_pred -----------------------CCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCcc
Q 008038 386 -----------------------NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT 442 (580)
Q Consensus 386 -----------------------~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~ 442 (580)
.....+.|||+.+..
T Consensus 184 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~------------------------------------------ 221 (336)
T 1oe1_A 184 DGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGAL------------------------------------------ 221 (336)
T ss_dssp TSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTT------------------------------------------
T ss_pred CCceeecccccccccchhhHhhcCCCCEEEECCeeccC------------------------------------------
Confidence 001134444432210
Q ss_pred CCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEE
Q 008038 443 LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWT 520 (580)
Q Consensus 443 ~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~v 520 (580)
.+...+.++.|++++|+..+.+.. .+++++|||.|.|+. +|.+- .|. +.||+.|++|+.+
T Consensus 222 ~~~~~l~v~~GervRlin~~~~~~------~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~ 283 (336)
T 1oe1_A 222 TGANALTAKVGETVLLIHSQANRD------TRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAG 283 (336)
T ss_dssp SGGGCEEEETTCEEEEEEEESSSC------BCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEE
T ss_pred CCCcceEcCCCCEEEEEecCCCCc------cceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcE
Confidence 011348899999999866555443 566678999999985 44331 222 4699999999999
Q ss_pred EEEEEecCceeeEEeeecchhh-hcccEEEEeccc
Q 008038 521 ALRFVADNPGAWAFHCHIEPHF-HIGMGVVLALGV 554 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~-d~GM~~~~~~~~ 554 (580)
.+.+++++||.|+||||.+.|. +.||+++|.+..
T Consensus 284 dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 284 AALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred EEEEEcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 9999999999999999999986 999999997743
No 53
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.71 E-value=7.1e-16 Score=164.35 Aligned_cols=252 Identities=10% Similarity=-0.025 Sum_probs=162.0
Q ss_pred eEEEEEEEEEEEeCCCC-----------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccCCC
Q 008038 31 TRHYKWEVEYMFWSPDC-----------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLGTP 98 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~~~ 98 (580)
.+++.|.++.-....+| .....++|||+. .|+|+|++| ++++|+.|........+|+ ||..... .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45788888766555443 335689999984 799999999 9999999996667889999 8866542 4
Q ss_pred CCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccE------------EEEEEEcCCCCCCCCCC
Q 008038 99 WADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLY------------GSLIVDVADGEKEPFHY 161 (580)
Q Consensus 99 ~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~------------G~liV~~~~~~~~p~~~ 161 (580)
..||.+ .+....|.|||+++..+++.+.|+||++++........+. ..+-+...... .+.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~-~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLL-PLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCC-C----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCC-cCc--
Confidence 689964 2457889999999999999888999999985433211111 11111111000 000
Q ss_pred CcceEEEEeecccCchHHHHhhhcCCC-CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecC
Q 008038 162 DGEFNLLLSDWWHRSVHEQEVGLSSRP-LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 240 (580)
Q Consensus 162 d~e~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 240 (580)
..+.+..|..+...+. .... ..+... ..++|||+.+.. ..+.+.++.|
T Consensus 306 ~~~~p~~L~~~~~~~~-------~~~~~~~~~l~-~~~~iNg~~f~~-----------------------~~~~~~~~~G 354 (451)
T 2uxt_A 306 TDSLPMRLLPTEIMAG-------SPIRSRDISLG-DDPGINGQLWDV-----------------------NRIDVTAQQG 354 (451)
T ss_dssp --CCCSCSSSSCCCCC-------CCSEEEEEEEC-SSSSBTTBCCCT-----------------------TCCCEEEETT
T ss_pred cccCccccCCCCCCCC-------CCcceEEEEEe-eEEEECCEeCCC-----------------------CCCcEEcCCC
Confidence 0000000000000000 0000 000000 046789887651 1225889999
Q ss_pred CEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc---CceeeeeEEEcCCceEEEEEEeCCCCCcc----eEEEEeecC
Q 008038 241 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---QPFEVDDMDIYSGESYSVLLTTNQDPSYN----YWISAGVRG 313 (580)
Q Consensus 241 e~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~g~----y~l~~~~~~ 313 (580)
++++|+|+|. ..|.||||||.|+|++.||.+. +|...|+|.| |+++.|.+++++ +|. |.+|||...
T Consensus 355 ~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn--pg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 355 TWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ--PSWAHFPFYFNSQTLE 427 (451)
T ss_dssp CEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS--CCBTTBCEEEEESSHH
T ss_pred CEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC--CCCCCCceEEeCCchh
Confidence 9999999997 4799999999999999999876 4778999999 999999999986 445 999999754
Q ss_pred CCCCCCCceEEEEec
Q 008038 314 RKPATPPALTLLNYH 328 (580)
Q Consensus 314 ~~~~~~~~~ail~y~ 328 (580)
.. .....+.+.+.
T Consensus 428 H~--d~GMm~~~~v~ 440 (451)
T 2uxt_A 428 MA--DRGSIGQLLVN 440 (451)
T ss_dssp HH--HTTCEEEEEEE
T ss_pred HH--hCCCcEEEEEc
Confidence 32 22345556655
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.69 E-value=1.5e-15 Score=161.61 Aligned_cols=245 Identities=14% Similarity=0.098 Sum_probs=164.5
Q ss_pred eEEEEEEEEEEEeCCC------------CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCC
Q 008038 31 TRHYKWEVEYMFWSPD------------CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTP 98 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~------------g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~ 98 (580)
.+++.|.++.-....+ |.....+++||+. .|.|+|++| ++++|+.|........+|++|..... .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 4677777765433321 3345689999986 799999999 99999999966668899999977643 4
Q ss_pred CCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc---ccc--------------EEEEEEEcCCC-C
Q 008038 99 WADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS---AGL--------------YGSLIVDVADG-E 155 (580)
Q Consensus 99 ~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~---~Gl--------------~G~liV~~~~~-~ 155 (580)
+.||.+ .+....|.|||+++..+++.++|.||++|+...... .|| ....++.-... .
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 302 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK 302 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc
Confidence 679865 234578999999999999988999999998321100 122 12222221111 1
Q ss_pred CCCCCCCcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEE
Q 008038 156 KEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 235 (580)
Q Consensus 156 ~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (580)
..++.. .. ..+.++..... .....+.. ......+.|||+.+.. ....+
T Consensus 303 ~~~~p~--~l-~~~~~l~~~~~-~r~~~l~~-----~~~g~~~~iNg~~~~~-----------------------~~~~~ 350 (439)
T 2xu9_A 303 PLPLPK--AL-SPFPTLPAPVV-TRRLVLTE-----DMMAARFFINGQVFDH-----------------------RRVDL 350 (439)
T ss_dssp CCCCCS--CC-CCCCCCCCCSE-EEEEEEEE-----EGGGTEEEETTBCCCT-----------------------TCCCE
T ss_pred cccCcc--cC-CCcccCCCCCc-ceEEEEEe-----eccCceEeECCEECCC-----------------------CCCce
Confidence 111110 00 00000000000 00000000 0011368899998651 11247
Q ss_pred EEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 236 HVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 236 ~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
.++.|++++|+|.|.+. ..|.||||||.|+|++.+|... .|...|++.|.||+++.+.++++. +|.|.+|||...
T Consensus 351 ~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn--pG~w~~HCHil~ 426 (439)
T 2xu9_A 351 KGQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE--KGRTVFHCHIVE 426 (439)
T ss_dssp EECTTCEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS--CEEEEEEESSHH
T ss_pred ecCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC--CCCEEEECCcch
Confidence 89999999999999874 4799999999999999999876 588899999999999999999776 899999999743
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.61 E-value=1.4e-14 Score=156.47 Aligned_cols=286 Identities=12% Similarity=0.131 Sum_probs=172.8
Q ss_pred EEEEEEEEEEeCCCCc-----eeEEEEEcCCCC--------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCC
Q 008038 33 HYKWEVEYMFWSPDCK-----ESIVMGINGQFP--------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW 99 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~p--------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~ 99 (580)
++.|.++.-....++. ....++|||+.. .|+|+|++|+++++||.|........+|++|..... ..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 5667776655444432 245789999753 289999999999999999965667899999876543 46
Q ss_pred CCCCC----CCccccCCCCCeEEEEEEcC-CCcceeeecCcc--hh-----hccccEEEEEEEcCCCCCCCCCCCcceEE
Q 008038 100 ADGTA----SISQCPINPGETYLYRFKVD-KAGTYFYHGHLG--MQ-----RSAGLYGSLIVDVADGEKEPFHYDGEFNL 167 (580)
Q Consensus 100 ~DG~~----~~~q~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~--~~-----~~~Gl~G~liV~~~~~~~~p~~~d~e~~l 167 (580)
.||.+ .+....|.|||+++..+++. .+|+||.+++.. .. ...|+..+++.........|.........
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~ 301 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA 301 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccC
Confidence 78864 23456789999999999995 479999999843 11 23345445554432221111100000000
Q ss_pred EEeecccCchH--HHHhh-hc-CCCCCC--C--CCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCCceEEE
Q 008038 168 LLSDWWHRSVH--EQEVG-LS-SRPLRW--I--GEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCAPQILH 236 (580)
Q Consensus 168 ~~~d~~~~~~~--~~~~~-~~-~~~~~~--~--~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (580)
.+.++...+.. ..... .. .....+ . .....|+|||+.+..-... ..+. + ...+. .-......+.
T Consensus 302 ~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~-g-~~~~~---~~~~~~~~~~ 376 (503)
T 1hfu_A 302 QLNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMS-G-AQSAN---DLLPAGSVYE 376 (503)
T ss_dssp BCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHT-T-CCSGG---GSSSTTSEEE
T ss_pred CCccccccccCccCCCCcccCCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhc-C-Ccccc---cCCCCceEEE
Confidence 00010000000 00000 00 000000 0 0112688999987521100 0000 0 00000 0011234789
Q ss_pred EecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc----CceeeeeEEE-cCCceEEEEEEeCCCCCcceEEEEee
Q 008038 237 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDI-YSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 237 v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~v~l-~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++.|++|+++|+|......|.||||||.|+|++.+|... .|...|++.| .+|+++.+.+++++ +|.|.+|||.
T Consensus 377 v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn--PG~W~~HCHi 454 (503)
T 1hfu_A 377 LPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN--PGPWFFHCHI 454 (503)
T ss_dssp ECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS--CEEEEEEESS
T ss_pred ccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC--CeeeeEecCc
Confidence 999999999999543355799999999999999998752 5889999999 89999999999887 8999999997
Q ss_pred cCCCCCCCCceEEEEec
Q 008038 312 RGRKPATPPALTLLNYH 328 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~ 328 (580)
.... .....+.+.+.
T Consensus 455 l~H~--~~GM~~~~~v~ 469 (503)
T 1hfu_A 455 EFHL--MNGLAIVFAED 469 (503)
T ss_dssp HHHH--HTTCEEEEEEC
T ss_pred hhHh--hCCCeEEEEEC
Confidence 4432 12334445554
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.61 E-value=2.3e-14 Score=155.44 Aligned_cols=281 Identities=13% Similarity=0.156 Sum_probs=170.2
Q ss_pred EEEEEEEEEEeCCCCc----------eeEEEEEcCCCC---------CCeEEecCCCEEEEEEEeCCCCCceeeeecccc
Q 008038 33 HYKWEVEYMFWSPDCK----------ESIVMGINGQFP---------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIR 93 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~----------~~~~~~~NG~~p---------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~ 93 (580)
++.|.++.-....++. ....++|||+.. -|+|+|++|+++++|+.|........+|++|..
T Consensus 164 e~~l~l~D~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~ 243 (521)
T 1v10_A 164 STVITIADWYHSLSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHR 243 (521)
T ss_dssp GGEEEEEEECSSCCC-------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCC
T ss_pred eeEEEEcccccCCHHHHhhccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCe
Confidence 4566665544333322 235789999743 189999999999999999965667899999976
Q ss_pred ccCCCCCCCCC----CCccccCCCCCeEEEEEEcC-CCcceeeecCcch---hhccccEEEEEEEcCCCCCCCCCCCcce
Q 008038 94 QLGTPWADGTA----SISQCPINPGETYLYRFKVD-KAGTYFYHGHLGM---QRSAGLYGSLIVDVADGEKEPFHYDGEF 165 (580)
Q Consensus 94 ~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~~---~~~~Gl~G~liV~~~~~~~~p~~~d~e~ 165 (580)
... ...||.+ .+....|.|||+++..+++. .+|+||.+++... ....|+..+++.........|......
T Consensus 244 ~~v-i~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~- 321 (521)
T 1v10_A 244 MTV-IEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNS- 321 (521)
T ss_dssp EEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCC-
T ss_pred EEE-EecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCc-
Confidence 543 4679865 23457799999999999995 4799999998431 223345445555432221111110000
Q ss_pred EEEEeecccCchH--HH---------HhhhcCCCCCCCCCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCC
Q 008038 166 NLLLSDWWHRSVH--EQ---------EVGLSSRPLRWIGEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCA 231 (580)
Q Consensus 166 ~l~~~d~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (580)
...+.+....+.. .. ...+. ...........|.|||+.+..-... ..+. +. ..+. +-...
T Consensus 322 ~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~-l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~-g~-~~~~---~~~~~ 395 (521)
T 1v10_A 322 GTALNEANLIPLINPGAPGNPVPGGADINLN-LRIGRNATTADFTINGAPFIPPTVPVLLQILS-GV-TNPN---DLLPG 395 (521)
T ss_dssp SCBCCGGGCCBSSCCCCSSCSSTTCSSEEEE-CCEECCSSSSCCEESSCCCCCCSSCHHHHHHH-TC-CCGG---GSSST
T ss_pred ccccchhhcccCCcccCCCcccCCcceEEEE-EEEecCCceeEEEECCCcccCCCCchhhhhhc-CC-cccc---cCCCC
Confidence 0000000000000 00 00000 0000001112678999987521100 0000 00 0000 00112
Q ss_pred ceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcc----cCceeeeeEEE-cCCceEEEEEEeCCCCCcceE
Q 008038 232 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY----VQPFEVDDMDI-YSGESYSVLLTTNQDPSYNYW 306 (580)
Q Consensus 232 ~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~----v~P~~~d~v~l-~pGeR~dv~v~~~~~~~g~y~ 306 (580)
...+.++.|++|+++|+| ...|.||||||.|+|++.+|.. ..|...|++.| .+|+++.+.+++++ +|.|.
T Consensus 396 ~~~~~v~~g~~vei~l~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN--PG~W~ 470 (521)
T 1v10_A 396 GAVISLPANQVIEISIPG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN--PGPWF 470 (521)
T ss_dssp TTEEEECTTCEEEEEEEC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS--CEEEE
T ss_pred ceEEEecCCCEEEEEEcC---CCCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC--CeeEE
Confidence 347899999999999999 3479999999999999999875 25889999999 89999999999887 89999
Q ss_pred EEEeecCCCCCCCCceEEEEec
Q 008038 307 ISAGVRGRKPATPPALTLLNYH 328 (580)
Q Consensus 307 l~~~~~~~~~~~~~~~ail~y~ 328 (580)
+|||..... .....+.+.+.
T Consensus 471 ~HCHi~~H~--~~GM~~~~~v~ 490 (521)
T 1v10_A 471 LHCHIDWHL--EAGLAVVFAED 490 (521)
T ss_dssp EEESCHHHH--TTTCEEEEEES
T ss_pred EeeChHHHH--hCCCeEEEEEC
Confidence 999974432 22334445554
No 57
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.56 E-value=1.2e-15 Score=129.06 Aligned_cols=88 Identities=31% Similarity=0.410 Sum_probs=70.9
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCC--CCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecC
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGT--PWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGH 134 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~--~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H 134 (580)
+|++|+|++++||+|+ ++|. ...++++||||...+.. ..+||.+ .+++.|.||++++|+|++ .++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~-~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNN-KLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEEC-SSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred EEeCCEEEEcCCCEEE--EEEC-CCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 6778999999999975 6799 67899999999865321 0122222 246789999999999999 79999999999
Q ss_pred cchhhccccEEEEEEEc
Q 008038 135 LGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~~ 151 (580)
.|...||.|.|+|++
T Consensus 91 --~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 --PHRGAGMVGKITVEG 105 (105)
T ss_dssp --TTGGGTCEEEEEECC
T ss_pred --CchhcCCEEEEEEcC
Confidence 677889999999964
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.55 E-value=3.8e-13 Score=143.57 Aligned_cols=245 Identities=11% Similarity=0.088 Sum_probs=163.0
Q ss_pred EEEEEEEEEEEeCCCCc-------------eeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCC
Q 008038 32 RHYKWEVEYMFWSPDCK-------------ESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTP 98 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~-------------~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~ 98 (580)
.+| |.++......+|. ....+++||+. .|+|.|++|+ ++|+.|........+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 556 7777766655543 34578999985 6899999999 999999977788999999987543 5
Q ss_pred CCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhh--------ccccEEEEEEEcCCCCCCCC-----C
Q 008038 99 WADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR--------SAGLYGSLIVDVADGEKEPF-----H 160 (580)
Q Consensus 99 ~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~--------~~Gl~G~liV~~~~~~~~p~-----~ 160 (580)
+.||.. .+....|.|||+++..+++.+.|+|...++..... ......-+.+... +...|. .
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~lP~~l~~~~ 334 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NVELPKNLKIFK 334 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECSSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CCCCCSCSCCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcCCCcEEEEEEecccccCccccCCCCceeEEEEecCCC-CccCCccccCCC
Confidence 778732 23567899999999999998888887776532210 0001111222211 111110 0
Q ss_pred ----CCcceEEEEeecccCchHHHHhhhcCCCCCC--CCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceE
Q 008038 161 ----YDGEFNLLLSDWWHRSVHEQEVGLSSRPLRW--IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQI 234 (580)
Q Consensus 161 ----~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (580)
.+.+..+.++....+ ...+...+... ......++|||+.+.. ..+.
T Consensus 335 ~~~~~~~~r~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-----------------------~~~~ 386 (481)
T 3zx1_A 335 PSEEPKEFKEIIMSEDHMQ-----MHGMMGKSEGELKIALASMFLINRKSYDL-----------------------KRID 386 (481)
T ss_dssp CCCCCCEEEEEEEEECCST-----TTTGGGCCHHHHHHHHHTTEEETTBCCCT-----------------------TCCC
T ss_pred CCCCCCcEEEEEEeccchh-----cccccccccccccccccceeEECCEeCCC-----------------------CCce
Confidence 012223333221100 00000000000 0001248999998651 1235
Q ss_pred EEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEE--CCccc---CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 235 LHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA--DGNYV---QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 235 ~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~--DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
+.++.|++++|+|+|.+ ...|.||||||.|+|++. ||... ++...|+|.|.|||++.|.++++. +|.|.+||
T Consensus 387 ~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~--pG~w~~HC 463 (481)
T 3zx1_A 387 LSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF--KGLRMYHC 463 (481)
T ss_dssp EEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS--CEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC--CeeEEEEc
Confidence 89999999999999976 458999999999999999 99866 357899999999999999999976 89999999
Q ss_pred eecC
Q 008038 310 GVRG 313 (580)
Q Consensus 310 ~~~~ 313 (580)
|...
T Consensus 464 Hil~ 467 (481)
T 3zx1_A 464 HILE 467 (481)
T ss_dssp SSHH
T ss_pred CChH
Confidence 8644
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.53 E-value=3.2e-13 Score=144.99 Aligned_cols=256 Identities=14% Similarity=0.161 Sum_probs=156.8
Q ss_pred eEEEEEcCCC---------CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCe
Q 008038 50 SIVMGINGQF---------PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGET 116 (580)
Q Consensus 50 ~~~~~~NG~~---------pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~ 116 (580)
...++|||+- +-|.|+|++|+++++|+.|........+|++|..... ...||.+ .+....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4689999962 3479999999999999999856667889998876543 4678865 234578999999
Q ss_pred EEEEEEcC-CCcceeeecCcc--h-hhccccEEEEEEEcCCCCCCCCCCCcce-EEEEeecccCchHHHH-hh--hc-CC
Q 008038 117 YLYRFKVD-KAGTYFYHGHLG--M-QRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQE-VG--LS-SR 187 (580)
Q Consensus 117 ~~y~f~~~-~~Gt~wYH~H~~--~-~~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~~~d~~~~~~~~~~-~~--~~-~~ 187 (580)
++..++++ ..|.||.++... . ....|...+++.........|....... ...+.+....+..... .. .. ..
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~ 326 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGGA 326 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCCC
Confidence 99999995 459999998732 1 1223343455555432211121100000 0000011110000000 00 00 00
Q ss_pred C----CCCCCCCceEEeCccCCCCccc---cccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE
Q 008038 188 P----LRWIGEPQTLLINGRGQFNCSL---AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 260 (580)
Q Consensus 188 ~----~~~~~~~~~~liNG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i 260 (580)
. ..+......|+|||+.+..-.. ...+. +... ..+......++.++.|++|+|.|.|......|.||+
T Consensus 327 d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~-g~~~----~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HL 401 (495)
T 3t6v_A 327 DCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICS-GANT----AADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHL 401 (495)
T ss_dssp SEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHT-TCCS----STTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEE
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhc-CCcC----cccccCCcceEEecCCCEEEEEEccCCCCCCcceee
Confidence 0 0000012368899987642100 00000 0000 000011234789999999999998433345799999
Q ss_pred eCeeeEEEEECCccc----CceeeeeEEEcC-CceEEEEEEeCCCCCcceEEEEeecC
Q 008038 261 KNHKMVVVEADGNYV----QPFEVDDMDIYS-GESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 261 ~gh~~~via~DG~~v----~P~~~d~v~l~p-GeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
|||.|.|++.+|... .|...|++.|.+ |+.+.+.+++++ +|.|.+|||...
T Consensus 402 HGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn--PG~W~~HCHi~~ 457 (495)
T 3t6v_A 402 HGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN--PGPWFLHCHIDW 457 (495)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS--CEEEEEEESCHH
T ss_pred cCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC--CeeEEEEecchh
Confidence 999999999988654 588999999997 999999999887 899999999643
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.49 E-value=2.8e-12 Score=139.23 Aligned_cols=255 Identities=9% Similarity=0.076 Sum_probs=152.9
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcCC
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVDK 125 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~~ 125 (580)
...++|||+. .|+|+|++|+++++||.|........+|++|..+.. ...||.+ .+....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4588999985 699999999999999999966667889998876543 4678865 234577999999999999943
Q ss_pred --CcceeeecCcchhh----c--cccEEEEEEEcCCCCCCCCCC-CcceEEEEeecccCch----------HHHHhhhcC
Q 008038 126 --AGTYFYHGHLGMQR----S--AGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSV----------HEQEVGLSS 186 (580)
Q Consensus 126 --~Gt~wYH~H~~~~~----~--~Gl~G~liV~~~~~~~~p~~~-d~e~~l~~~d~~~~~~----------~~~~~~~~~ 186 (580)
.|.||......... . .......+++-..+...|... ..+....+.|....+. ..+...+..
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 57899988743211 0 012222233221111111000 0000000000000000 000000000
Q ss_pred CCCCCCCCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh 263 (580)
... ......++|||+.+..-... ..+..+ ....+...- ......+.++.|++++|.|.|.+. ..|.||||||
T Consensus 325 ~~~--~~~~~~~~iNg~s~~~~~~P~L~~~~~~~-~~~~~~~~~-~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh 399 (534)
T 1zpu_A 325 DNL--KNGVNYAFFNNITYTAPKVPTLMTVLSSG-DQANNSEIY-GSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGH 399 (534)
T ss_dssp EEC--TTSCEEEEETTBCCCCCSSCHHHHHTTSG-GGTTCGGGG-CSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTC
T ss_pred ecc--CCceeEEEECCCcccCCCCCceeeecccC-cccCCCccc-CCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCC
Confidence 000 01124678999876421100 000000 000000000 011236889999999999999874 4799999999
Q ss_pred eeEEEEECCc--------------------ccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 264 KMVVVEADGN--------------------YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 264 ~~~via~DG~--------------------~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
.|+|++.++. ...|...|+|.|.+|+.+.+.+++++ +|.|.+|||...
T Consensus 400 ~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN--PG~W~~HCHi~~ 467 (534)
T 1zpu_A 400 AFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN--PGVWFFHCHIEW 467 (534)
T ss_dssp CEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS--CEEEEEEECCHH
T ss_pred ceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC--CeeEEEEeCchh
Confidence 9999999853 12477899999999999999999887 899999999644
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.49 E-value=3.8e-13 Score=144.48 Aligned_cols=255 Identities=14% Similarity=0.157 Sum_probs=154.9
Q ss_pred eEEEEEcCCC--------CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeE
Q 008038 50 SIVMGINGQF--------PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETY 117 (580)
Q Consensus 50 ~~~~~~NG~~--------pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~ 117 (580)
...++|||+- +-|.|+|++|+++++||.|........+|++|..... ...||.+ .+....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4689999963 3479999999999999999966667899999977643 4678865 2345679999999
Q ss_pred EEEEEcC-CCcceeeecCcc--hh-hccccEEEEEEEcCCCCCCCCCC-CcceEEEEeecccCchHHH-Hhh--hc-CCC
Q 008038 118 LYRFKVD-KAGTYFYHGHLG--MQ-RSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQ-EVG--LS-SRP 188 (580)
Q Consensus 118 ~y~f~~~-~~Gt~wYH~H~~--~~-~~~Gl~G~liV~~~~~~~~p~~~-d~e~~l~~~d~~~~~~~~~-~~~--~~-~~~ 188 (580)
+..++++ ..|.||..+... .+ ...|..-+++.........|... .... ..+.+....+.... ... .. ...
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 9999995 459999988632 11 12233234444432221112110 0000 00001111000000 000 00 000
Q ss_pred ----CCCCCCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeec--CCceeEEEE
Q 008038 189 ----LRWIGEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST--TALASLNLA 259 (580)
Q Consensus 189 ----~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNa--g~~~~~~~~ 259 (580)
..+......|+|||+.+..-... ..+. +.. + ..+......++.++.|++|+|.|.|. .....|.||
T Consensus 324 ~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~-g~~---~-~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~H 398 (499)
T 3pxl_A 324 KAINMAFNFNGSNFFINGASFVPPTVPVLLQILS-GAQ---T-AQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFH 398 (499)
T ss_dssp EEEECCEEECSSCEEETTBCCCCCSSCHHHHHHT-TCC---S-TTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEE
T ss_pred EEEEEEEEecCcEEEEcCEecCCCCCchhhhhhc-CCc---c-ccccCCCceeEEecCCCEEEEEEecCcccCCCCccce
Confidence 00001123678999876411000 0000 000 0 00001123478999999999999942 223469999
Q ss_pred EeCeeeEEEEECCccc----CceeeeeEEEcC---CceEEEEEEeCCCCCcceEEEEeecC
Q 008038 260 VKNHKMVVVEADGNYV----QPFEVDDMDIYS---GESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 260 i~gh~~~via~DG~~v----~P~~~d~v~l~p---GeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
+|||.|.|++.+|... .|...|++.|.+ |+.+.+.+++++ +|.|.+|||...
T Consensus 399 LHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn--PG~W~~HCHi~~ 457 (499)
T 3pxl_A 399 LHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN--PGPWFLHCHIDF 457 (499)
T ss_dssp ETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS--CEEEEEEESSHH
T ss_pred ecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC--CceEEEEeCChh
Confidence 9999999999888643 588999999986 999999999887 999999999643
No 62
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.47 E-value=8.5e-13 Score=140.81 Aligned_cols=255 Identities=13% Similarity=0.063 Sum_probs=161.6
Q ss_pred EEEEEEEEEEEeCCCC--------------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccC
Q 008038 32 RHYKWEVEYMFWSPDC--------------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLG 96 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~ 96 (580)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++++|+.|........+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4677888766554444 234578999985 588876 6789999999996667788888 6765432
Q ss_pred CCCCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchh----hc--cccEEEEEEEc---CCCCCCC----
Q 008038 97 TPWADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ----RS--AGLYGSLIVDV---ADGEKEP---- 158 (580)
Q Consensus 97 ~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~----~~--~Gl~G~liV~~---~~~~~~p---- 158 (580)
...||.. .+....|.|||+++..+++.+.++|+.-+..... .. ..-.-.+-|.+ +.....|
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~ 307 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS 307 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEECTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeCCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccc
Confidence 4679853 2456789999999999999878888776552111 10 11111222222 0111111
Q ss_pred -CC--------CCcceEEEEee-cccCchHHHHh--------hh-----cC---CC-CCC--C----CCCceEEeCccCC
Q 008038 159 -FH--------YDGEFNLLLSD-WWHRSVHEQEV--------GL-----SS---RP-LRW--I----GEPQTLLINGRGQ 205 (580)
Q Consensus 159 -~~--------~d~e~~l~~~d-~~~~~~~~~~~--------~~-----~~---~~-~~~--~----~~~~~~liNG~~~ 205 (580)
+. ..+++.+.+.. +.......++. .+ .. .+ +.. . .....|+|||+.+
T Consensus 308 ~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~ 387 (488)
T 3od3_A 308 SLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAF 387 (488)
T ss_dssp CCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCC
T ss_pred cCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeC
Confidence 00 01334444321 00000000000 00 00 00 000 0 0012479999987
Q ss_pred CCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCc---eeeee
Q 008038 206 FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDD 282 (580)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P---~~~d~ 282 (580)
.. ..+.++++.|++++|+|+|.+....|.||||||.|+|++.||....+ ...|+
T Consensus 388 ~~-----------------------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDT 444 (488)
T 3od3_A 388 DM-----------------------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDT 444 (488)
T ss_dssp CT-----------------------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSE
T ss_pred CC-----------------------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeE
Confidence 51 12358899999999999999865579999999999999999987754 46899
Q ss_pred EEEcCCceEEEEEEeCCC--CCcceEEEEeecC
Q 008038 283 MDIYSGESYSVLLTTNQD--PSYNYWISAGVRG 313 (580)
Q Consensus 283 v~l~pGeR~dv~v~~~~~--~~g~y~l~~~~~~ 313 (580)
|.|. |+++.|+|+++.. .+|.|.+|||...
T Consensus 445 V~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~ 476 (488)
T 3od3_A 445 VKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLE 476 (488)
T ss_dssp EEES-SSEEEEEECBCSCCCGGGCEEEEESSHH
T ss_pred EEeC-CCEEEEEEEeccCCCCCCCEEEeCCchH
Confidence 9999 9999999999762 2578999999643
No 63
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.46 E-value=1.9e-12 Score=141.57 Aligned_cols=244 Identities=11% Similarity=0.052 Sum_probs=143.5
Q ss_pred eEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEc-C-CCcceeeecCcc
Q 008038 63 TIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKV-D-KAGTYFYHGHLG 136 (580)
Q Consensus 63 ~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~-~-~~Gt~wYH~H~~ 136 (580)
+|+|++|+++++||.|........+|++|..... ...||.+ .+....|.|||+++..+++ . .+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999966667889999976543 4678854 2345789999999999999 4 489999999854
Q ss_pred hhh-ccc-cEEEEEEEcCCCCCCCCCCCcceEEEEeecccCc-hHHH-HhhhcC-----CCCC------C------CCCC
Q 008038 137 MQR-SAG-LYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRS-VHEQ-EVGLSS-----RPLR------W------IGEP 195 (580)
Q Consensus 137 ~~~-~~G-l~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~-~~~~-~~~~~~-----~~~~------~------~~~~ 195 (580)
.-. ... ..+.|-.........|........ .|.... .... +..+.. .+.. + ....
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 359 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTP----AWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGY 359 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCC----CTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCC----ccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCe
Confidence 210 111 122333322221011100000000 000000 0000 000000 0000 0 0012
Q ss_pred ceEEeCccCCCCcc--c-cc-------cccCC----CcccccccC------CCCCCceEEEEecCCEEEEEEeecCC---
Q 008038 196 QTLLINGRGQFNCS--L-AA-------HFSNG----SAEQCKLRG------NEQCAPQILHVQPNKTYRLRIASTTA--- 252 (580)
Q Consensus 196 ~~~liNG~~~~~~~--~-~~-------~~~~~----~~~~~~~~~------~~~~~~~~~~v~~Ge~~rlRliNag~--- 252 (580)
..+.|||+.+..-. + .. .|+.. ....|.-.. ........+.++.|++++|.|.|.+.
T Consensus 360 ~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~ 439 (552)
T 1aoz_A 360 VKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKE 439 (552)
T ss_dssp EEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSST
T ss_pred EEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccccc
Confidence 24788888653110 0 00 00000 000000000 00001235889999999999999874
Q ss_pred --ceeEEEEEeCeeeEEEEEC-Ccc----------cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 253 --LASLNLAVKNHKMVVVEAD-GNY----------VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 253 --~~~~~~~i~gh~~~via~D-G~~----------v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
...|.||||||.|+|++.. |.+ ..|...|++.|.+|+.+.+.+++++ +|.|.+|||...
T Consensus 440 ~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN--PG~W~~HCHi~~ 511 (552)
T 1aoz_A 440 NLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN--PGVWAFHCHIEP 511 (552)
T ss_dssp TCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS--CEEEEEEESSHH
T ss_pred ccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC--CeEEEEEeeehh
Confidence 3469999999999999984 553 2578899999999999999999987 899999999754
No 64
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.45 E-value=3.2e-13 Score=121.76 Aligned_cols=100 Identities=22% Similarity=0.335 Sum_probs=74.7
Q ss_pred CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC------CCCc-cccCCCCC--e
Q 008038 46 DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT------ASIS-QCPINPGE--T 116 (580)
Q Consensus 46 ~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~------~~~~-q~~i~pG~--~ 116 (580)
.+...+...++|. ++|+|+|++||+|+|+++|. .+ ...|.+.+...++.+.+.. ++.. ...|.||+ +
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~-~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt 121 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINT-NK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGY 121 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEEC-CT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcC-CC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceE
Confidence 4444555666776 68999999999999999997 32 3366666665444433211 0000 12789999 9
Q ss_pred EEEEEEcCCCcceeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.+|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 122 ~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 122 TDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999999 99999999999999999999999984
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.45 E-value=1.6e-12 Score=138.20 Aligned_cols=231 Identities=12% Similarity=0.053 Sum_probs=153.2
Q ss_pred EEEEEEEEEEEeCC-------------CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee--cc---cc
Q 008038 32 RHYKWEVEYMFWSP-------------DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW--HG---IR 93 (580)
Q Consensus 32 ~~~~l~~~~~~~~~-------------~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~--HG---~~ 93 (580)
+++.|.++.-.... .|.....++|||+. .|+|+|++| ++++|+.|........+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776554332 12234588999985 699999999 9999999996667889999 77 44
Q ss_pred ccCCCCCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhcc------------c-cEEEE--EEEcCC
Q 008038 94 QLGTPWADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSA------------G-LYGSL--IVDVAD 153 (580)
Q Consensus 94 ~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~------------G-l~G~l--iV~~~~ 153 (580)
... ...||.+ .+....|.|||+++..+++. .+.||..++....... + ....+ .+....
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKG 293 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEEC
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCC
Confidence 332 4678864 23456789999999999987 4788988873221000 0 11112 221111
Q ss_pred CCCCCCCC----------CcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCccccc
Q 008038 154 GEKEPFHY----------DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCK 223 (580)
Q Consensus 154 ~~~~p~~~----------d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~ 223 (580)
....|... ..+..+.+. .....|+|||+.+..
T Consensus 294 ~~~~p~~L~~lp~~~~~~~~~~~~~l~----------------------~~~~~~~iNg~~~~~---------------- 335 (448)
T 3aw5_A 294 EAVPVEALSDPPPEPPKPTRTRRFALS----------------------LSGMQWTINGMFWNA---------------- 335 (448)
T ss_dssp CCCCCCCCSCCCCCCCCCSEEEEEEEE----------------------EETTEEEETTBCCCT----------------
T ss_pred CCCCccccCCCCCCCCCCCceEEEEEe----------------------CCCceeeECCCcCCC----------------
Confidence 10001000 000011110 011248899998751
Q ss_pred ccCCCCCCceEEE-EecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc------------Cc---eeeeeEEEcC
Q 008038 224 LRGNEQCAPQILH-VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV------------QP---FEVDDMDIYS 287 (580)
Q Consensus 224 ~~~~~~~~~~~~~-v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v------------~P---~~~d~v~l~p 287 (580)
..+.+. ++.|++++|+|.|.+....|.||||||.|+|++.+|... .| ...|++.|.|
T Consensus 336 -------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~p 408 (448)
T 3aw5_A 336 -------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWP 408 (448)
T ss_dssp -------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECT
T ss_pred -------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCC
Confidence 112355 889999999999987345799999999999999999764 23 5789999999
Q ss_pred CceEEEEEEeC---CCCCcceEEEEeecC
Q 008038 288 GESYSVLLTTN---QDPSYNYWISAGVRG 313 (580)
Q Consensus 288 GeR~dv~v~~~---~~~~g~y~l~~~~~~ 313 (580)
|+++.+.+++. .+.+ |.+|||...
T Consensus 409 g~~~~i~vrF~~~~adnp--w~~HCHil~ 435 (448)
T 3aw5_A 409 GETVKIVVNFDAKKRGQL--FPFHCHNLE 435 (448)
T ss_dssp TCEEEEEEEECGGGTTCE--EEEEESSHH
T ss_pred CCEEEEEEEecccCCCCc--EEEEcCChH
Confidence 99999997775 4334 999999743
No 66
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.42 E-value=1.6e-11 Score=134.15 Aligned_cols=251 Identities=10% Similarity=0.057 Sum_probs=151.1
Q ss_pred eEEEEEcCCCC--------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeE
Q 008038 50 SIVMGINGQFP--------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETY 117 (580)
Q Consensus 50 ~~~~~~NG~~p--------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~ 117 (580)
...++|||+.. -|+|+|++|+++++||.|........+|++|..+.. ...||.+ .+....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999863 379999999999999999966667899999976543 4678876 2345779999999
Q ss_pred EEEEEcC-CCcceeeecCc--chh---hccccEEEEEEEcCCCCCCCCCC-----C----cceEE-EEeecccCch----
Q 008038 118 LYRFKVD-KAGTYFYHGHL--GMQ---RSAGLYGSLIVDVADGEKEPFHY-----D----GEFNL-LLSDWWHRSV---- 177 (580)
Q Consensus 118 ~y~f~~~-~~Gt~wYH~H~--~~~---~~~Gl~G~liV~~~~~~~~p~~~-----d----~e~~l-~~~d~~~~~~---- 177 (580)
+..+++. .+|.||..... ... .......+++.........|... + .+..+ .+........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999994 47899988765 211 11111123333322111111110 0 00000 0000000000
Q ss_pred -HHHHhhhcCCCCCCCCCCceEEeCccCCCCc---cc-cccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCC
Q 008038 178 -HEQEVGLSSRPLRWIGEPQTLLINGRGQFNC---SL-AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA 252 (580)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~ 252 (580)
......+.... . ......++|||+.+... ++ ...+. +. ..-......+.++.++.+++-++|...
T Consensus 354 ~~~~~~~~~~~~-~-~~~~~~~~iNg~s~~~~~~~P~L~~~~~-g~-------~~~~~~~~~~~~~~~~~v~~~vi~n~~ 423 (559)
T 2q9o_A 354 RPDNTLPVALDL-T-GTPLFVWKVNGSDINVDWGKPIIDYILT-GN-------TSYPVSDNIVQVDAVDQWTYWLIENDP 423 (559)
T ss_dssp CGGGEEEEEEEC-S-SSSSCEEEETTBCCCCCTTSCHHHHHHH-TC-------CCCCGGGCEEEECCSSCEEEEEEEECT
T ss_pred ceeEEEEEEeec-C-CCceEEEEECCEecccCCCCCcHhHhhc-CC-------ccCCCCceEEEcCCCCEEEEEEEeCCC
Confidence 00000000000 0 11234688999987411 10 00000 00 000011236888887778777776643
Q ss_pred ----ceeEEEEEeCeeeEEEEECC---------ccc------------CceeeeeEEEcCCceEEEEEEeCCCCCcceEE
Q 008038 253 ----LASLNLAVKNHKMVVVEADG---------NYV------------QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 307 (580)
Q Consensus 253 ----~~~~~~~i~gh~~~via~DG---------~~v------------~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l 307 (580)
...|.||||||.|+|++.++ ... .|...|+|.|.+|+.+.+.++++. +|.|.+
T Consensus 424 ~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN--PG~W~~ 501 (559)
T 2q9o_A 424 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN--PGAWLF 501 (559)
T ss_dssp TSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS--CEEEEE
T ss_pred ccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC--CeeEEE
Confidence 45799999999999999987 321 467899999999999999999887 899999
Q ss_pred EEeecC
Q 008038 308 SAGVRG 313 (580)
Q Consensus 308 ~~~~~~ 313 (580)
|||...
T Consensus 502 HCHil~ 507 (559)
T 2q9o_A 502 HCHIAW 507 (559)
T ss_dssp EECCHH
T ss_pred Eecchh
Confidence 999754
No 67
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.41 E-value=7.8e-13 Score=113.02 Aligned_cols=105 Identities=23% Similarity=0.175 Sum_probs=78.7
Q ss_pred EEEEEEEEEEEe-----CCCCceeEE-EEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 32 RHYKWEVEYMFW-----SPDCKESIV-MGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 32 ~~~~l~~~~~~~-----~~~g~~~~~-~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
++|++.+..... ..++..... ..+|+++++|.|++++||+|+++++|. ... +||+.... .|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~-d~~-----~H~~~i~~----~~~-- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK-SPI-----SEGFSIDA----FGV-- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEEC-SSS-----CEEEEEGG----GTE--
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEEC-CCC-----eEEEEEcC----CCc--
Confidence 345666655433 234555555 489999999999999999999999999 444 56655431 122
Q ss_pred CccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+..+.||++++|.|+++++|+||||||....... |.|.|+|++
T Consensus 70 --~~~i~pG~~~~~~f~~~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 --QEVIKAGETKTISFTADKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp --EEEECTTCEEEEEEECCSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred --eeEeCCCCEEEEEEECCCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 5679999999999999999999999986554333 999999974
No 68
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.37 E-value=1.8e-12 Score=132.96 Aligned_cols=99 Identities=25% Similarity=0.441 Sum_probs=82.6
Q ss_pred EEEcCCC--CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC---C-----CCccccCCCCCeEEEEEE
Q 008038 53 MGINGQF--PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT---A-----SISQCPINPGETYLYRFK 122 (580)
Q Consensus 53 ~~~NG~~--pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~---~-----~~~q~~i~pG~~~~y~f~ 122 (580)
|+|||+. ..|.|++++||+|+|++.|. ....+++|+||..+.. ..+|. | ......|.||++++|.|+
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~-g~~~HpfHlHGh~f~v--~~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITH-GEYYHTFHMHGHRWAD--NRTGILTGPDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEE-SSCCEEEEETTCCEES--SSSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcC-CccccccEecCcEEEE--eccCcccCCCCcccceeeEEeCCCCEEEEEEE
Confidence 6899986 36899999999999999999 6789999999987542 12332 1 123467999999999999
Q ss_pred c---CCCcceeeecCcchhhccccEEEEEEEcCCC
Q 008038 123 V---DKAGTYFYHGHLGMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 123 ~---~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~ 154 (580)
+ +.+|+|+||||...+...||.|.|+|.+++.
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 6 7899999999999999999999999998654
No 69
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.37 E-value=9.1e-12 Score=135.04 Aligned_cols=262 Identities=15% Similarity=0.050 Sum_probs=157.4
Q ss_pred EEEEEEEEEEEeCCCC-----------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeecc-------cc
Q 008038 32 RHYKWEVEYMFWSPDC-----------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHG-------IR 93 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG-------~~ 93 (580)
.++.|.++......+| .....+++||+ +.|.|.|++| ++++||.|........++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 3456666665444333 23558999998 4799999985 999999999666678899976 22
Q ss_pred ccCCCCCCCCC-----CCccccCCCCCeEEEEEEcCC-Cc-ceeeecCcchhhc-------cccEEEEEEEcCCCCCCCC
Q 008038 94 QLGTPWADGTA-----SISQCPINPGETYLYRFKVDK-AG-TYFYHGHLGMQRS-------AGLYGSLIVDVADGEKEPF 159 (580)
Q Consensus 94 ~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~-~G-t~wYH~H~~~~~~-------~Gl~G~liV~~~~~~~~p~ 159 (580)
+. -...||.. .+....|.|||+++..+++.+ +| +||.......... ....+.+-+........+.
T Consensus 250 ~~-vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FK-VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EE-EEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 22 14678852 235678999999999999944 67 5877653210000 0011222222211100000
Q ss_pred CCCcceEEEEeeccc-CchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEe
Q 008038 160 HYDGEFNLLLSDWWH-RSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 238 (580)
Q Consensus 160 ~~d~e~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (580)
....+..+..... ......... ..+......|+|||+.+.. ...+..+.++
T Consensus 329 --~~~~P~~L~~~~~p~~~~~~~~~-----~~~~~~~~~w~iNG~~f~~---------------------~~~p~l~~v~ 380 (534)
T 3abg_A 329 --TSVVPANLRDVPFPSPTTNTPRQ-----FRFGRTGPTWTINGVAFAD---------------------VQNRLLANVP 380 (534)
T ss_dssp --CCCCCCCCCCCSCCCCCCCCCEE-----EECSCCCSTTCCCCBTTBC---------------------TTSCCCCEEC
T ss_pred --CCCCccccccCCCCCCccccceE-----EEEeccCceeEECCcccCC---------------------CCCcceeecc
Confidence 0000000000000 000000000 0001122357899987651 0112246789
Q ss_pred cCCEEEEEEeecCCceeEEEEEeCeeeEEEEE-CCc---ccCc---eeeeeEEEcCCceEEEEEE-eCCCCCcceEEEEe
Q 008038 239 PNKTYRLRIASTTALASLNLAVKNHKMVVVEA-DGN---YVQP---FEVDDMDIYSGESYSVLLT-TNQDPSYNYWISAG 310 (580)
Q Consensus 239 ~Ge~~rlRliNag~~~~~~~~i~gh~~~via~-DG~---~v~P---~~~d~v~l~pGeR~dv~v~-~~~~~~g~y~l~~~ 310 (580)
.|++++|.|.|.+....|.||||||.|+|++. +|. ...+ ...|+|.|.||+++.|.+. ++. +|.|.+|||
T Consensus 381 ~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn--pG~w~~HCH 458 (534)
T 3abg_A 381 VGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF--PGVYMFHCH 458 (534)
T ss_dssp TTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC--CEEEEEEES
T ss_pred CCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC--CccEEEecC
Confidence 99999999999875557999999999999998 663 1112 4589999999999999998 555 899999999
Q ss_pred ecCCCCCCCCceEEEEec
Q 008038 311 VRGRKPATPPALTLLNYH 328 (580)
Q Consensus 311 ~~~~~~~~~~~~ail~y~ 328 (580)
..... .....+.+.+.
T Consensus 459 il~H~--d~GMm~~~~V~ 474 (534)
T 3abg_A 459 NLIHE--DHDMMAAFNAT 474 (534)
T ss_dssp CHHHH--HTTCEEEEEEC
T ss_pred hHHHH--hcCCceEEEEE
Confidence 75432 12334556665
No 70
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.35 E-value=2.8e-11 Score=132.49 Aligned_cols=247 Identities=9% Similarity=0.009 Sum_probs=151.7
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccc-------cccCCCCCCCCCC-----Cc------cccC
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGI-------RQLGTPWADGTAS-----IS------QCPI 111 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~-------~~~~~~~~DG~~~-----~~------q~~i 111 (580)
...++|||+. .|.|.|++| ++++||.|........+++.|. .+. -...||.+- +. ...|
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEE
Confidence 4578999994 799999999 9999999997777888998775 111 146788641 23 5678
Q ss_pred CCCCeEEEEEEc-CCCcc-eeeecCcchhh------c----cccEEEEEEEcCCC-CC--CC--CC--C-----C---cc
Q 008038 112 NPGETYLYRFKV-DKAGT-YFYHGHLGMQR------S----AGLYGSLIVDVADG-EK--EP--FH--Y-----D---GE 164 (580)
Q Consensus 112 ~pG~~~~y~f~~-~~~Gt-~wYH~H~~~~~------~----~Gl~G~liV~~~~~-~~--~p--~~--~-----d---~e 164 (580)
.|||+++.-+++ +.+|+ ++...-..... . .+..--|.|..... +. .| +. + + ..
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 999999999999 44574 65554421110 0 11222245554321 11 11 10 0 0 01
Q ss_pred eEEEEee------------cccCc--hHHHHhhhcCCCC----CCCCCCceEEeCccCCCCccccccccCCCcccccccC
Q 008038 165 FNLLLSD------------WWHRS--VHEQEVGLSSRPL----RWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 226 (580)
Q Consensus 165 ~~l~~~d------------~~~~~--~~~~~~~~~~~~~----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~ 226 (580)
..+.+.. |.... ..... .+...+. ...+....++|||+.+.+
T Consensus 411 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~iNG~~~~~------------------- 470 (612)
T 2g23_A 411 RLIVLTPPGTKGSGGHPEIWEMAEVEDPADV-QVPAEGVIQVTGADGRTKTYRRTAATFND------------------- 470 (612)
T ss_dssp EEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECSTTS-------------------
T ss_pred eEEeeccccccccccccceeecccccccccc-ccccccceeeeccCCceeEEEECCccCCC-------------------
Confidence 1122210 00000 00000 0000000 001122468899997651
Q ss_pred CCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCc------------------------cc---Ccee
Q 008038 227 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN------------------------YV---QPFE 279 (580)
Q Consensus 227 ~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~------------------------~v---~P~~ 279 (580)
...++++.|++++|+|+|.+. ..|.||||+|.|+|++.+|. ++ ++..
T Consensus 471 -----~~~~~v~~G~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~ 544 (612)
T 2g23_A 471 -----GLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGH 544 (612)
T ss_dssp -----CCCEEEETTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSC
T ss_pred -----CCceEecCCCEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccc
Confidence 236899999999999999874 47999999999999987542 11 2336
Q ss_pred eeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEec
Q 008038 280 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH 328 (580)
Q Consensus 280 ~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~ 328 (580)
.|+|.|.|||++.|.++++. .+|.|.+|||..... .....+.+.+.
T Consensus 545 kDTv~v~Pg~~~~i~~~~~~-~pG~w~~HCHil~He--d~GMm~~f~V~ 590 (612)
T 2g23_A 545 KDVFQVPGPQGLRVMGKFDG-AYGRFMYHCHLLEHE--DMGMMRPFVVM 590 (612)
T ss_dssp BSEEEECSSEEEEEEEECCS-CCEEEEEEESSHHHH--TTTCEEEEEEE
T ss_pred cCeEEECCCcEEEEEEEeCC-CCccEEEEeCchhHh--hcCCceEEEEC
Confidence 89999999999999999983 389999999975432 12334455554
No 71
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=5e-12 Score=136.37 Aligned_cols=95 Identities=19% Similarity=0.300 Sum_probs=74.9
Q ss_pred CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCC
Q 008038 46 DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK 125 (580)
Q Consensus 46 ~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~ 125 (580)
+++...+|++|+++++|+|++++||+|+++++|. ....-. +||+.... .|+ ...|.||++++|.|++.+
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~-d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNL-DEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEEC-CCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeC-CCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 5678889999999999999999999999999997 332111 35554432 222 367999999999999999
Q ss_pred CcceeeecCc---chhhccccEEEEEEEcCC
Q 008038 126 AGTYFYHGHL---GMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 126 ~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~ 153 (580)
+|+||||||. ..| .||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 9999999992 234 3999999999753
No 72
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.29 E-value=2.8e-11 Score=130.98 Aligned_cols=231 Identities=13% Similarity=0.084 Sum_probs=145.8
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccc-cccCCCCCCCCC-----CCccccCCCCCeEEEEEEc
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGI-RQLGTPWADGTA-----SISQCPINPGETYLYRFKV 123 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~-~~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f~~ 123 (580)
...++|||+. .|.|.++.| ++++|+.|........+|+.|. .+.. ...||.. .+....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4578999985 799999986 9999999996666788999886 4332 4679843 2356788999999999999
Q ss_pred CC-Ccceeee-cCcc--hhhcccc-EEEEEEEcCC--C----CCCC--CCC-C--------cceEEEEeecccCchHHHH
Q 008038 124 DK-AGTYFYH-GHLG--MQRSAGL-YGSLIVDVAD--G----EKEP--FHY-D--------GEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 124 ~~-~Gt~wYH-~H~~--~~~~~Gl-~G~liV~~~~--~----~~~p--~~~-d--------~e~~l~~~d~~~~~~~~~~ 181 (580)
.+ +|.++.- .-.. .....+. ...+-+.... . ...| +.. + .+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 44 6763321 1111 0000001 1222222211 0 0011 000 0 0011111100
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEe
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVK 261 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~ 261 (580)
.. ......++|||+.+.+ +..+.++.|++++|+|+|.+.. .|.||||
T Consensus 378 -------~~-~~g~~~~~iNg~~~~~------------------------~~~~~~~~g~~~~w~l~N~~~~-~HP~HlH 424 (513)
T 2wsd_A 378 -------QD-EYGRPVLLLNNKRWHD------------------------PVTETPKVGTTEIWSIINPTRG-THPIHLH 424 (513)
T ss_dssp -------EC-TTSCEEEEETTBCTTS------------------------CCCBCCBTTCEEEEEEEECSSS-CEEEEES
T ss_pred -------cC-CCCCceEeECCccCCC------------------------cccEecCCCCEEEEEEEcCCCC-CcCEeEe
Confidence 00 0012356799987641 1246788999999999998744 7999999
Q ss_pred CeeeEEEEECCcc----------------c-----CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCC
Q 008038 262 NHKMVVVEADGNY----------------V-----QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPP 320 (580)
Q Consensus 262 gh~~~via~DG~~----------------v-----~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~ 320 (580)
||.|+|++.++.. . ++...|++.|.||+++.|.++++. .+|.|.+|||..... ...
T Consensus 425 G~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~d-npG~w~~HCHil~H~--~~G 501 (513)
T 2wsd_A 425 LVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGP-YSGRYVWHCHALEHE--DYD 501 (513)
T ss_dssp SCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCS-CCEEEEEEESCHHHH--TTT
T ss_pred CceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecC-CCCCEEEEcCChhhh--hcC
Confidence 9999999987621 0 234789999999999999999952 489999999975432 233
Q ss_pred ceEEEEec
Q 008038 321 ALTLLNYH 328 (580)
Q Consensus 321 ~~ail~y~ 328 (580)
..+.+++.
T Consensus 502 Mm~~~~V~ 509 (513)
T 2wsd_A 502 MMRPMDIT 509 (513)
T ss_dssp CEEEEEEB
T ss_pred CceeEEEe
Confidence 44555554
No 73
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.21 E-value=9.8e-10 Score=119.54 Aligned_cols=249 Identities=11% Similarity=0.031 Sum_probs=149.3
Q ss_pred eEEEEEcCCCC----------------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccc
Q 008038 50 SIVMGINGQFP----------------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQC 109 (580)
Q Consensus 50 ~~~~~~NG~~p----------------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~ 109 (580)
...++|||+.. .++|+|++|+++++|+.|........++++|..+.. ...||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999732 379999999999999999966667799999977643 4678875 23456
Q ss_pred cCCCCCeEEEEEEc-CCCcceeeecCcchh----hccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhh
Q 008038 110 PINPGETYLYRFKV-DKAGTYFYHGHLGMQ----RSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 110 ~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~----~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
.|.|||+++..+++ +..|.||........ ...+..-+|+.........|.....+. .+-..+.....+...
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~----~~~~~~~~~~~L~P~ 379 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTP----RGTCEDEPVASLVPH 379 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCC----CCCSCCSCGGGCCBS
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCc----cchhhcccccccccC
Confidence 78999999999999 567999999874321 111122234443322111221110000 000000000000000
Q ss_pred cCC--CC--------CC-CCCCceEEeCccCCCC---ccc-cccccCCCcccccccCCCCCCceEEEEe----cCCEEEE
Q 008038 185 SSR--PL--------RW-IGEPQTLLINGRGQFN---CSL-AAHFSNGSAEQCKLRGNEQCAPQILHVQ----PNKTYRL 245 (580)
Q Consensus 185 ~~~--~~--------~~-~~~~~~~liNG~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~Ge~~rl 245 (580)
... +. .. ......+.|||..+.. -+. ..-+. + .-.+ ......+.+. .|++|.|
T Consensus 380 ~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~-g---~~~~----~~~~~~~~~~~~~~~~~~Vei 451 (580)
T 3sqr_A 380 LALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFN-N---ETIF----PTEYNVVALEQTNANEEWVVY 451 (580)
T ss_dssp SCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHT-T---CCCC----CGGGCEEEECC----CCEEEE
T ss_pred CCCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhc-C---CccC----CCCcceeecccccCCCcEEEE
Confidence 000 00 00 0122357788887631 110 00000 0 0000 0011234443 5999999
Q ss_pred EEeecCC-ceeEEEEEeCeeeEEEEECCc------------ccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 246 RIASTTA-LASLNLAVKNHKMVVVEADGN------------YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 246 RliNag~-~~~~~~~i~gh~~~via~DG~------------~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
-|-|.+. ...|.||+|||.|.|++.+.. ...|...|++.+.+|+.+.+.+++++ +|.|.+|||..
T Consensus 452 Vi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN--PG~W~~HCHi~ 529 (580)
T 3sqr_A 452 VIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN--PGSWLLHCHIA 529 (580)
T ss_dssp EEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS--CEEEEEEECSH
T ss_pred EEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC--CeeeEEEECcH
Confidence 9999861 247999999999999998432 22478899999999999999999987 89999999964
Q ss_pred C
Q 008038 313 G 313 (580)
Q Consensus 313 ~ 313 (580)
.
T Consensus 530 ~ 530 (580)
T 3sqr_A 530 W 530 (580)
T ss_dssp H
T ss_pred H
Confidence 3
No 74
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.13 E-value=1.8e-10 Score=96.87 Aligned_cols=79 Identities=23% Similarity=0.372 Sum_probs=62.0
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
+..|..+.|++++||+|++ +|. ...+|++|+++. .||.....+..|.||++++|.| .++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~-d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INR-EAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EEC-SSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EEC-CCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 4456679999999999655 698 667899998852 2555444455689999999988 799999999985
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 32 899999984
No 75
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.09 E-value=1.1e-10 Score=98.36 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=65.3
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|+||+||..+... .+. +.. ....++..+.||+...++|.+
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~------~H~v~~~~~~~~~~---~g~----~~~------~~~~~~~~i~pG~~~~~~f~~ 78 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLP------PHNILFDDKQVPGA---SKE----LAD------KLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEEECTTEEEEE--EECSSC------CEEEEECTTSSGGG---CHH----HHH------HHCEEEEECSTTCEEEEEECT
T ss_pred EEEEcCCCEEEE--EECCCC------CCeEEEeCCCCCcc---ccc----ccc------cccccccccCCCCeEEEEEec
Confidence 488999999986 477656 89999999876431 000 000 012578899999999999998
Q ss_pred -cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 -DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.||.|.|||| .|...||++.|.+.
T Consensus 79 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 79 DFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999764
No 76
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.05 E-value=9.5e-09 Score=114.01 Aligned_cols=79 Identities=5% Similarity=-0.003 Sum_probs=65.4
Q ss_pred EEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc---------------------------CceeeeeEEEc
Q 008038 234 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---------------------------QPFEVDDMDIY 286 (580)
Q Consensus 234 ~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~d~v~l~ 286 (580)
.+.++.|++++|.|+|.+.. .|.||||||.|+|++.+|... ++...|+|.|.
T Consensus 473 ~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~ 551 (612)
T 3gyr_A 473 GFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP 551 (612)
T ss_dssp CEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEEC
T ss_pred ceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEEC
Confidence 57899999999999998855 799999999999998876422 12247999999
Q ss_pred CCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 287 SGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 287 pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
+|+.+.|.+++.. .+|.|.+|||....
T Consensus 552 ~~~~v~i~~rfad-npG~w~~HCHil~H 578 (612)
T 3gyr_A 552 GPQGLRVMGKFDG-AYGRFMYHCHLLEH 578 (612)
T ss_dssp SSEEEEEEEECCS-CCEEEEEEESSHHH
T ss_pred CCCEEEEEEEeCC-CCcceEEcCCChHH
Confidence 9999999999643 48999999997543
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.04 E-value=2.5e-10 Score=101.28 Aligned_cols=93 Identities=17% Similarity=0.274 Sum_probs=69.8
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEe-------ecC--CCCCcccccccCCCCCCccceEEeCCCc
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG-------RGE--GKFTKEDEKKFNLKNPPLKNTAVIFPYG 518 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~-------~~~--g~~~~~~~~~~~~~~p~~rDTv~vpp~g 518 (580)
+.++.|++|+|++.|.+.+ . .|.||+|+....+.. ... ..+.+.+ ....++|+..|.||+
T Consensus 37 i~v~~G~~V~~~~~N~~~~----~-~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 37 LTVSAGQTVTIRFKNNSAV----Q-QHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNE 105 (139)
T ss_dssp EEECTTCEEEEEEECCCSS----C-CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTC
T ss_pred EEECCCCEEEEEEEeCCCC----C-CeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCC
Confidence 8899999999999997643 0 599999886532110 000 0111100 123578999999999
Q ss_pred EEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...|.|.+++||.|.||||+..|.+ ||++.|.|
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 9999999999999999999999999 99999876
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.03 E-value=6.1e-10 Score=93.84 Aligned_cols=83 Identities=20% Similarity=0.285 Sum_probs=63.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEc-CCCcceeeecCc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKV-DKAGTYFYHGHL 135 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~ 135 (580)
.+.|++++||+|++ +|. ...++++|+|+...+ ..+|.. ......+.||++++|.|++ .++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~-~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNN-KVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EEC-SSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-
T ss_pred CCEEEECCCCEEEE--EEC-CCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-
Confidence 47899999998755 588 567899998875432 112210 0123468999999999988 89999999999
Q ss_pred chhhccccEEEEEEEc
Q 008038 136 GMQRSAGLYGSLIVDV 151 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~~ 151 (580)
.|...||.|.|+|++
T Consensus 92 -~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 -PHRGAGMVGKITVAG 106 (106)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -ChhhcCcEEEEEEcC
Confidence 777889999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.98 E-value=1.6e-09 Score=95.97 Aligned_cols=91 Identities=20% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCC-ceeeeecccccc------------C--CCC-CCCCCC--CccccCCCCCeEEE
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTE-GVVIHWHGIRQL------------G--TPW-ADGTAS--ISQCPINPGETYLY 119 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~-~~siH~HG~~~~------------~--~~~-~DG~~~--~~q~~i~pG~~~~y 119 (580)
.|-.+.|+|++||+|+++++|. ... +++++.++.... + ..+ .++.+. -....|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~-~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNN-SAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECC-CSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeC-CCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 4445889999999999999999 666 899999874210 0 000 011110 01234899999999
Q ss_pred EEEcCCCcceeeecCcchhhccccEEEEEEE
Q 008038 120 RFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 120 ~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.|++.++|+|+||||...|.. ||.|.|+|+
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999888888 999999984
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.87 E-value=7.5e-09 Score=86.11 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=64.9
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
|..|-...|++++||+|+++++|. ...++++...+... ...+.||++.++.|++.++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~-d~~~H~~~~~~~~~-------------~~~~~pg~~~~~~~t~~~~G~Y~y~C~- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNK-GKSEHTFTIKKLGI-------------DVVVESGKEKNITVKPKSAGTYELICR- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEEC-SSSCEEEEEGGGTE-------------EEEECTTCEEEEEECCCSCEEEEEECT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcC-CCceEEEEEecCCc-------------ceeecCCcceeEEEecccCceEEEECc-
Confidence 444545689999999999999999 66677777766533 235789999999999999999999996
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.+...||.|.|+|+
T Consensus 87 -~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 -YHLLKGMEGKVIVK 100 (100)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -cccCCCCEEEEEEC
Confidence 46678999999995
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.80 E-value=9.7e-09 Score=86.36 Aligned_cols=84 Identities=19% Similarity=0.188 Sum_probs=62.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+|+ |.+.. .|+||+|+..+.. . .| . +... ...|++.+.||+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~------~H~~~~~~~~~~~--~-~g-~---~~~~------~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVP------PHNVVFDAALNPA--K-SA-D---LAKS------LSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CCCBEECSSSSTT--C-CH-H---HHHH------HCBCSCCCSTTCEEEEECCT
T ss_pred EEEECCCCEEEEE--ECCCC------CceEEEeCCCCcc--c-cc-c---cchh------ccccceeeCCCCEEEEEEec
Confidence 3889999999886 76655 8999999865411 0 00 0 0000 11467789999999999888
Q ss_pred -cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 -DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.||.|.|||| .|.+.||.+.|.|.
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999999764
No 82
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=8.3e-09 Score=85.47 Aligned_cols=78 Identities=27% Similarity=0.372 Sum_probs=59.7
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcCCCcceeeecCcc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVDKAGTYFYHGHLG 136 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~ 136 (580)
.+.|++++||+|+ ++|. ...++++|+|+...+ +|.. ......+.||+++++.|. ++|+|+|||+
T Consensus 17 P~~i~v~~G~~V~--~~n~-~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~-- 84 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNN-AGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCE-- 84 (98)
T ss_dssp SSEEEECTTCEEE--EEEC-SSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECG--
T ss_pred CCEEEECCCCEEE--EEEC-CCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC--CCeEEEEEcC--
Confidence 4789999999875 5888 667899999986432 1211 001246899999999874 8999999999
Q ss_pred hhhccccEEEEEEE
Q 008038 137 MQRSAGLYGSLIVD 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
.|...||.|.|+|+
T Consensus 85 ~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 85 PHQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGGTCEEEEEEC
T ss_pred CccccCCeEEEEEC
Confidence 67778999999984
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.77 E-value=4.8e-08 Score=86.57 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=68.2
Q ss_pred CCCCCeEEecCCCEEEEEEEe--CCCCCceeeeecccc------------cc----CCCCCCCCCCC-ccccCCCCCeEE
Q 008038 58 QFPGPTIRARAGDTIAVELTN--KLYTEGVVIHWHGIR------------QL----GTPWADGTASI-SQCPINPGETYL 118 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N--~l~~~~~siH~HG~~------------~~----~~~~~DG~~~~-~q~~i~pG~~~~ 118 (580)
+|-.+.|+|++||+|+++++| . ...+|+++++... .. .-+..|....+ ....|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 344579999999999999999 6 5678888887310 00 00000110000 113589999999
Q ss_pred EEEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 119 YRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 119 y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+.|++.++|+|||||+...+...||.|.|+|.|
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 999999999999999988888899999999974
No 84
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=4.2e-08 Score=81.14 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=58.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|++++||+|++ +|. ...+++++.++...++ ...++.. .....+.||+++++.| .++|+|+|||+ .|..
T Consensus 18 P~~i~v~~G~~V~~--~n~-~~~~H~~~~~~~~~pg-~~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNN-KLSPHNIVFDADGVPA-DTAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EEC-SSCCEEEEECCSSSCH-HHHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EEC-CCCCcEEEEeCCCCCc-ccccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cccc
Confidence 47899999998765 587 5678999988753210 0000000 0134689999999988 78999999999 6777
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
No 85
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.68 E-value=3.8e-08 Score=80.17 Aligned_cols=75 Identities=29% Similarity=0.452 Sum_probs=57.4
Q ss_pred CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhh
Q 008038 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR 139 (580)
Q Consensus 60 pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~ 139 (580)
-.+.|++++||+|++ +|. ...+++++.++... +. .....+.||+++++.| .++|+|||||+ .+.
T Consensus 17 ~P~~i~v~~Gd~V~~--~n~-~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 17 EPSTIEIQAGDTVQW--VNN-KLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PHR 80 (91)
T ss_dssp ESSEEEECTTCEEEE--EEC-SSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TTG
T ss_pred eCCEEEECCCCEEEE--EEC-CCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CCc
Confidence 347899999999765 577 56789999887311 00 1134689999988887 78999999999 566
Q ss_pred ccccEEEEEEE
Q 008038 140 SAGLYGSLIVD 150 (580)
Q Consensus 140 ~~Gl~G~liV~ 150 (580)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 67999999984
No 86
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.66 E-value=4.6e-08 Score=86.66 Aligned_cols=95 Identities=22% Similarity=0.288 Sum_probs=69.9
Q ss_pred EEccCCcEEEEEEEc--CCCCCCCCCCCCCeeecCC--CeEEEe-ec-----CCCCCcccccccCCCCCCccceEEeCCC
Q 008038 448 YMLGLNTTVDVILQN--ANAIRPNLSEIHPWHLHGH--DFWVLG-RG-----EGKFTKEDEKKFNLKNPPLKNTAVIFPY 517 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N--~~~~~~~~~~~HP~HlHG~--~F~vv~-~~-----~g~~~~~~~~~~~~~~p~~rDTv~vpp~ 517 (580)
+.++.|+.|+|++.| .+.+ .|.||++.. ++.-+. .+ ...|-+.. -....+++|..|.||
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGV------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----DTPNALAWTAMLNAG 103 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCC------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----TCTTEEEECCCBCTT
T ss_pred EEECCCCEEEEEEECCCCCCC------ceeEEEeccCcchhhhhhhhhhhcccccccCcc-----ccccccccceeeCCC
Confidence 889999999999999 5555 899999853 221100 00 00010000 001256789999999
Q ss_pred cEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 518 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 518 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
....+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 104 ~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 104 ESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999999775
No 87
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.62 E-value=5e-08 Score=80.50 Aligned_cols=78 Identities=22% Similarity=0.381 Sum_probs=58.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC--CccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS--ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~--~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
.+.|++++||+| +++|. ...+++++.++.... +|..+ .....+.||+++++.| .++|+|+|||+ .|
T Consensus 18 P~~i~v~~G~~V--~~~n~-~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMN-KVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEEC-SSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEEC-CCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Ch
Confidence 368999999985 55687 556888888865321 12110 0124589999999887 79999999999 67
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 778999999984
No 88
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.61 E-value=9.3e-08 Score=79.69 Aligned_cols=80 Identities=20% Similarity=0.212 Sum_probs=57.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCC-----CCCCCCC--ccccCCCCCeEEEEEEcCCCcceeeec
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW-----ADGTASI--SQCPINPGETYLYRFKVDKAGTYFYHG 133 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~-----~DG~~~~--~q~~i~pG~~~~y~f~~~~~Gt~wYH~ 133 (580)
.+.|++++||+|+ ++|. ...+++++++.-. ... ++..+++ ....+.||+++++.| .++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~-~~~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLV-GETGHNIVFDIPA---GAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEEC-SSSCBCCEECCCT---TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEEC-CCCCeEEEEeCcc---cccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEEEe
Confidence 4789999999976 5588 5667888877310 000 0000111 234589999999988 7999999999
Q ss_pred CcchhhccccEEEEEEE
Q 008038 134 HLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 134 H~~~~~~~Gl~G~liV~ 150 (580)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77778999999984
No 89
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.60 E-value=2.1e-07 Score=80.05 Aligned_cols=76 Identities=21% Similarity=0.209 Sum_probs=54.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|+|++||+|++.++|. +|++..+.- ..-+|.. ...+.||++++|.| +++|+|||+|- .|..
T Consensus 20 P~~i~V~~GdtV~f~~~~~----~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF--~~pG~y~y~C~--~H~~ 83 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK----SHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV--TEPGLYGVKCT--PHFG 83 (123)
T ss_dssp SSEEEECTTEEEEEEESST----TCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 3689999999977766653 344444321 1123321 23467999999888 78999999998 6777
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
.||.|.|+|.++
T Consensus 84 ~GM~G~I~V~~~ 95 (123)
T 3erx_A 84 MGMVGLVQVGDA 95 (123)
T ss_dssp TTCEEEEEESSS
T ss_pred CCcEEEEEECCC
Confidence 899999999864
No 90
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.59 E-value=4.3e-08 Score=81.08 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=59.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+ |.+.. .|.+|+|+..+- +. +... ...|+..+.||+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~p--g~--------~~~~------~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLS------PHNIVFDADGVP--AD--------TAAK------LSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECCSSSC--HH--------HHHH------HCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCCCC--cc--------cccc------ccccccccCCCCEEEEEc--
Confidence 3889999999986 65555 899999875321 10 0000 115788999999888766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||| .|.+.||.+.|.|
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 89999999999 7999999999876
No 91
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.56 E-value=1.7e-07 Score=77.58 Aligned_cols=78 Identities=19% Similarity=0.266 Sum_probs=58.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC------CCccccCCCCCeEEEEEEcCCCcceeeecC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA------SISQCPINPGETYLYRFKVDKAGTYFYHGH 134 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~------~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H 134 (580)
.+.|++++||+| +++|. ...+++++.++... .+|.. ......+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~-~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNN-AGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEEC-SSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEEC-CCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC
Confidence 368999999985 55888 56788888887432 12211 011235789999999884 8999999999
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 67778999999984
No 92
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.56 E-value=1.8e-07 Score=77.42 Aligned_cols=78 Identities=19% Similarity=0.242 Sum_probs=57.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----C--CccccCCCCCeEEEEEEcCCCcceeeecC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----S--ISQCPINPGETYLYRFKVDKAGTYFYHGH 134 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~--~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H 134 (580)
.+.|++++||+|+ ++|. ...+++++.++...+ +|.. + .....+.||+++++.| .++|+|+|+|+
T Consensus 16 P~~i~v~~G~tV~--~~n~-~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNN-AGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEEC-SSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEEC-CCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE--CCCceEEEEcC
Confidence 4789999999765 5888 566888888764221 2211 0 0123579999999887 49999999999
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 67778999999984
No 93
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.55 E-value=3.1e-07 Score=79.40 Aligned_cols=77 Identities=22% Similarity=0.308 Sum_probs=53.9
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+|++.++|. +|++..+.-. .-||.. ...+.||++++|.| +++|+|||||. .|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF--~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----GHNSALMKGG-----APEGAE---TWKGKINEEITVTL--SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 4799999999966554442 4444433211 112321 23457999988888 78999999998 4677
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
.||.|.|+|.+++
T Consensus 86 ~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 86 MGMIGAIVVGEPA 98 (127)
T ss_dssp GTCEEEEEESSCT
T ss_pred CCcEEEEEECcCC
Confidence 8999999999754
No 94
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.53 E-value=1.8e-07 Score=77.30 Aligned_cols=79 Identities=14% Similarity=0.225 Sum_probs=59.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|.||+|+..+ ...++. . ..++|+..+.||+...+.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~------~H~~~~~~~~~------p~~~~~---~------~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGF------PHNIVFDEDAI------PSGVNA---D------AISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEEECTTCEEEE--EECSSC------CEEEEECGGGS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCC------CCcccc---c------cccccceecCCCCEEEEEe--
Confidence 388999999988 576665 89999997522 111110 0 0246889999999888765
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||| .|.+.||.+.+.|
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 59999999999 7999999999876
No 95
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.52 E-value=5e-07 Score=77.56 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=55.7
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|+|++||+| +++|. . .+|++..+.... -+|. ....+.||+++++.| +++|+|||||- .|..
T Consensus 21 P~~i~V~~GDTV--~f~n~-~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~ 84 (124)
T 3ef4_A 21 PGFVKVEAGDTV--KFVPT-D-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA--EKEGLYVLKCA--PHYG 84 (124)
T ss_dssp SSEEEECTTCEE--EEECS-S-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC--CSSEEEEEECT--TTGG
T ss_pred CCEEEECCCCEE--EEEEC-C-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe--CCCeEEEEEcC--CCCc
Confidence 378999999996 45566 3 567776653211 1232 123567999988888 68999999995 6777
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
.||.|.|+|.++
T Consensus 85 ~GM~G~I~V~~p 96 (124)
T 3ef4_A 85 MGMVVLVQVGKP 96 (124)
T ss_dssp GTCEEEEEESSC
T ss_pred CCCEEEEEECCC
Confidence 899999999874
No 96
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.43 E-value=1.3e-07 Score=77.90 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=57.9
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|+|+ |.+.. .|.+++++..+. .+ ... ...++..+.||+...+.| +
T Consensus 21 i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~~-----~~------~~~------~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 21 LSISAGDTVEFV--MNKVG------PHNVIFDKVPAG-----ES------APA------LSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp EEECTTCEEEEE--ECSSC------CCCBEEEECCTT-----SC------HHH------HCBCCCCCSCSCCEEEEC--C
T ss_pred EEECCCCEEEEE--ECCCC------CeEEEEeCCCCc-----cc------ccc------ccccceecCCCCEEEEEe--C
Confidence 889999999886 65555 799999876540 00 000 114677788998887766 8
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||.|.|||+ .|.++||.+.+.|
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEE
Confidence 9999999999 9999999999876
No 97
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.42 E-value=5.8e-07 Score=72.99 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=56.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|.|. |.+.. .|.+|+|+.. . ...++..+.||+...+.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~------~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLA------PHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--
Confidence 3889999999886 65545 7999998720 0 114677889999877766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||| .|.+.||.+.+.|
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 89999999999 8999999998865
No 98
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=1.1e-06 Score=76.73 Aligned_cols=79 Identities=19% Similarity=0.285 Sum_probs=56.4
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
+..|-.+.|++++||+|++ +|. ...+|++++.... +|........+.||++++|.| .++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~-d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNG-EVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EEC-SSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EEC-CCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 3445458999999999765 588 5567777765321 122222233588999999988 689999999964
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 22 999999984
No 99
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.33 E-value=9.9e-07 Score=72.91 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=59.1
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|.+|+++..|. ..++.. .. ...+|++.+.||+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~~~~~~~~~p------~g~~~~-~~------~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGF------PHNDLFDKKEVP------AGVDVT-KI------SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEEECTTEEEEE--EECSSC------CBCCEECTTSSC------TTCCHH-HH------SCCTTCCBCSTTCEEEEEE--
T ss_pred EEEECCCCEEEE--EECCCC------cceEEEeCCCCc------cccccc-cc------cccccceeeCCCCEEEEEe--
Confidence 378999999888 576665 899999986441 111100 00 0125667889999887766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||+ .|.+.||.+.+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 69999999999 8999999999876
No 100
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.33 E-value=4.3e-06 Score=72.42 Aligned_cols=92 Identities=18% Similarity=0.139 Sum_probs=62.0
Q ss_pred CCCCCeEEecCC-CEEEEEEEeCCCCCc-----eeeeec--cccc-------cCCCCCC----CCCCC--ccccCCCCCe
Q 008038 58 QFPGPTIRARAG-DTIAVELTNKLYTEG-----VVIHWH--GIRQ-------LGTPWAD----GTASI--SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v~~G-d~v~v~v~N~l~~~~-----~siH~H--G~~~-------~~~~~~D----G~~~~--~q~~i~pG~~ 116 (580)
+|--..|.|++| |+|+|+|+|. ...+ |++-+- |... ..-..++ +.+.+ ....|.||++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~-g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet 92 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHK-GHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEK 92 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEEC-SSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCE
T ss_pred eEccCeEEEcCCCeEEEEEEEEC-CCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCE
Confidence 344468999999 9999999998 5443 544332 2110 0000011 11110 1134799999
Q ss_pred EEEEEEcC---CCcceeeecCcchhhccccEEEEEEEc
Q 008038 117 YLYRFKVD---KAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 117 ~~y~f~~~---~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
.++.|++. ++|+|||.|-...|.. ||.|.|+|.+
T Consensus 93 ~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 93 TSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 99999986 9999999998777777 8999999973
No 101
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.29 E-value=2.3e-06 Score=72.52 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=57.2
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.+.|.+.. .|-|++... .-+..+.||+...+.|.++
T Consensus 40 i~v~~G~~V~~~~~n~d~~------~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 40 LVVKKGDAVKVVVENKSPI------SEGFSIDAF---------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp EEEETTCEEEEEEEECSSS------CEEEEEGGG---------------------------TEEEEECTTCEEEEEEECC
T ss_pred EEEeCCCEEEEEEEECCCC------eEEEEEcCC---------------------------CceeEeCCCCEEEEEEECC
Confidence 8899999999999998743 455444321 0256789999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEecc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
.||.|.||||+..|... |.+.+.+.
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEe
Confidence 99999999999887654 88888653
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.28 E-value=2.9e-06 Score=70.00 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=56.3
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC----CccccCCCCCeEEEEEEcCCCcceeeecC
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS----ISQCPINPGETYLYRFKVDKAGTYFYHGH 134 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~----~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H 134 (580)
|-.+.|++++||+|++ +|. ...++++....-. +-+|... .....+.||+++++.| .++|+|+|+|-
T Consensus 15 F~P~~i~v~~GdtV~~--~n~-~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNN-AGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EEC-SSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EEC-CCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc--CCCEEEEEEch
Confidence 3347899999999655 588 5567877766421 1122210 0013589999998888 79999999997
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
. |...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 4 6667999999984
No 103
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.27 E-value=2.5e-06 Score=73.36 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=52.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+|+ ++|. .. +|++..+- ...-||.. .....||++++|.| .++|+|||+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~~~-~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPV-DK-GHNVESIK-----DMIPEGAE---KFKSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEE--EEES-SS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEEC-CC-CeEEEEec-----ccCCCCcc---ceecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 4789999999965 5565 22 45444431 01112321 12356899888777 68999999997 4777
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 899999999874
No 104
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.24 E-value=6.5e-06 Score=74.23 Aligned_cols=92 Identities=16% Similarity=0.137 Sum_probs=62.0
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeee--cccccc------CCCCCC----CCCCC--ccccCCCCCeE
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHW--HGIRQL------GTPWAD----GTASI--SQCPINPGETY 117 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~--HG~~~~------~~~~~D----G~~~~--~q~~i~pG~~~ 117 (580)
+|--..|.| ++||+|+|+|+|. ...+ |++-+ +|.... ....++ +-+.+ ....|.||+++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~-g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~ 132 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHT-GTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEES 132 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEEC-SCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecceEEEecCCCEEEEEEEEC-CCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEE
Confidence 454468999 9999999999999 5543 44433 221000 000001 00100 11357999999
Q ss_pred EEEEEcC--CCcceeeecCcchhhccccEEEEEEEc
Q 008038 118 LYRFKVD--KAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 118 ~y~f~~~--~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
++.|++. ++|+|||+|-...|.. ||.|.|+|.+
T Consensus 133 svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 133 SLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999986 8999999998777777 8999999973
No 105
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.22 E-value=3.6e-06 Score=69.67 Aligned_cols=70 Identities=14% Similarity=0.270 Sum_probs=57.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|++.|.+.. .|.|.+.+..+ ...+.||....+.|+++
T Consensus 30 i~v~~G~tV~~~~~n~d~~------~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 30 ITIPINESTTLLLKNKGKS------EHTFTIKKLGI---------------------------DVVVESGKEKNITVKPK 76 (100)
T ss_dssp EEECTTSCEEEEEEECSSS------CEEEEEGGGTE---------------------------EEEECTTCEEEEEECCC
T ss_pred EEECCCCEEEEEEEcCCCc------eEEEEEecCCc---------------------------ceeecCCcceeEEEecc
Confidence 8999999999999998755 67665543221 23567889999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||.|.|+|. .|...||.+.+.|
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cCceEEEECc--cccCCCCEEEEEE
Confidence 9999999996 6999999998865
No 106
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.22 E-value=2.8e-06 Score=73.00 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=53.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+| +++|. .. +|++..+. ...-||.. ...+.||+++++.| .++|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV--~f~n~-~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSI--KFLPT-DK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF--DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEE--EEECS-SS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC--CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEE--EEEEC-CC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--Cccc
Confidence 478999999995 45666 22 44444431 01123321 12457999988877 68999999997 4677
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
.||.|.|+|.+++
T Consensus 84 ~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 84 MGMVALVVVGDKR 96 (123)
T ss_dssp TTCEEEEEESSCC
T ss_pred cCCEEEEEEcCCC
Confidence 8999999998643
No 107
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.20 E-value=1.2e-06 Score=72.77 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=57.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCc-cceEEeCCCcEEEEEEE
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL-KNTAVIFPYGWTALRFV 525 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ 525 (580)
.+.++.|++|+|+ |.+.. .|.++++.-... .+.+.. ... .+.+ .+++.+.||+...+.|
T Consensus 18 ~i~v~~G~tV~~~--n~~~~------~H~~~~~~~~~~-----~~~~~~--~~~----~~~~~~~~~~~~pG~~~~~tf- 77 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGET------GHNIVFDIPAGA-----PGTVAS--ELK----AASMDENDLLSEDEPSFKAKV- 77 (102)
T ss_dssp EEEECTTCCEEEE--ECSSS------CBCCEECCCTTC-----CHHHHH--HHH----HTSCCTTCCBBTTBCEEEECC-
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCcccc-----cccccc--hhh----cccccccceecCCCCEEEEEe-
Confidence 3889999999986 76655 799998831110 000000 000 0122 4677889999887766
Q ss_pred ecCceeeEEeeecchhhhcccEEEEec
Q 008038 526 ADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 526 adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||+ .|.+.||.+.+.|
T Consensus 78 -~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 78 -STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp -CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred -CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 89999999999 9999999999876
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.09 E-value=1.9e-05 Score=68.37 Aligned_cols=91 Identities=20% Similarity=0.194 Sum_probs=60.6
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeeec--cccc-------cCCCCCC----CCCC-C-ccccCCCCCe
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHWH--GIRQ-------LGTPWAD----GTAS-I-SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~H--G~~~-------~~~~~~D----G~~~-~-~q~~i~pG~~ 116 (580)
+|--..|.| ++||+|+|+|+|. ...+ |++-+- |... ..-+.+| +-+. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHV-GKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEEC-CCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCE
Confidence 344468999 9999999999999 5553 554432 2100 0000111 1111 0 1124799999
Q ss_pred EEEEEEcC--CCcc-eeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVD--KAGT-YFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.+..|++. ++|+ |||.|-...|.. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 93 DSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999996 7766 999998777777 899999996
No 109
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.09 E-value=1.3e-05 Score=67.03 Aligned_cols=77 Identities=19% Similarity=0.304 Sum_probs=53.0
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcch
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGM 137 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~ 137 (580)
.|-...|+|++||+|++ +|. ...+|++...... .|........+.||+++++.| .++|+|+|+|-.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~-d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~-- 95 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNG-EVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP-- 95 (106)
T ss_dssp EESSSEEEECTTCEEEE--EEC-SSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS--
T ss_pred EEeCCEEEECCCCEEEE--EEC-CCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeCC--
Confidence 44457999999999765 488 4556666554321 111111122578999999888 689999999975
Q ss_pred hhccccEEEEEEE
Q 008038 138 QRSAGLYGSLIVD 150 (580)
Q Consensus 138 ~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 96 H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 HP--FMRGKVIVE 106 (106)
T ss_dssp CT--TCEEEEEEC
T ss_pred CC--CCEEEEEEC
Confidence 32 899999984
No 110
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.06 E-value=1.7e-05 Score=83.92 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=64.4
Q ss_pred EEEEcCCCCCCeEEecCCCEEEEEEEeCC--CCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcce
Q 008038 52 VMGINGQFPGPTIRARAGDTIAVELTNKL--YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTY 129 (580)
Q Consensus 52 ~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l--~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~ 129 (580)
+...+-.|-.+.|+|++||+|++.++|.. .+..|++...++.. ...+.||++.++.|++.++|+|
T Consensus 548 Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI-------------K~DaiPGrtnsvtFtadkPGvY 614 (638)
T 3sbq_A 548 MTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV-------------SMEISPQQTSSITFVADKPGLH 614 (638)
T ss_dssp EEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc-------------eeeeCCCCeEEEEEEcCCCEEE
Confidence 44455566668999999999999999962 13444444333211 3468899999999999999999
Q ss_pred eeecCcc-hhhccccEEEEEEEcC
Q 008038 130 FYHGHLG-MQRSAGLYGSLIVDVA 152 (580)
Q Consensus 130 wYH~H~~-~~~~~Gl~G~liV~~~ 152 (580)
||+|..- ...-.+|.|.|+|+|+
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 9999832 2222579999999974
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.05 E-value=2.4e-05 Score=67.53 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=61.6
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeeecccc---------ccCCCCCC----CCCC-C-ccccCCCCCe
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHWHGIR---------QLGTPWAD----GTAS-I-SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~HG~~---------~~~~~~~D----G~~~-~-~q~~i~pG~~ 116 (580)
+|-...|.| +.|++|+|+++|. ...+ |++-+-... +..-..+| +-+. + ....|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHT-GKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEEC-CCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 444468999 9999999999999 5554 655432110 00000111 1111 0 1124799999
Q ss_pred EEEEEEcC--CCcc-eeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVD--KAGT-YFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+++.|.+. ++|+ |+|.|-...|.. ||.|.|+|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999997 8995 999998777777 899999996
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.05 E-value=2.3e-05 Score=67.70 Aligned_cols=91 Identities=22% Similarity=0.151 Sum_probs=61.2
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeeec--cccc-------cCCCCCCCC----CC-C-ccccCCCCCe
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHWH--GIRQ-------LGTPWADGT----AS-I-SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~H--G~~~-------~~~~~~DG~----~~-~-~q~~i~pG~~ 116 (580)
+|-...|.| ++||+|+|+|+|. ...+ |++-+- |... ..-..++=+ +. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHS-GSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEEC-CCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 444468999 9999999999999 5553 655442 2110 000011111 10 0 0124899999
Q ss_pred EEEEEEcC--CCcc-eeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVD--KAGT-YFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+++.|.+. ++|+ |||.|-...|.. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999996 7877 999998777777 899999983
No 113
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.01 E-value=1.3e-05 Score=66.16 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=57.7
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|.++++...+- . ..+.. .. ...++.+.+.||+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~v~~~~~~~p-----~-~~~~~-~~------~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGF------PHNIVFDEDSIP-----S-GVDAS-KI------SMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEEECTTCEEEE--EECSSC------CBCCEECTTSSC-----T-TCCHH-HH------CCCTTCCBCSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCc-----c-ccccc-cc------ccccCccccCCCCEEEEEE--
Confidence 388999999988 676655 899999875430 0 01100 00 0123556788998877765
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||+ .|.++||.+.+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 69999999999 8999999999876
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.92 E-value=2.4e-05 Score=69.99 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=59.2
Q ss_pred eEEccCCcEEEEEEEcCC-CCCCCCCCCCCeeecCC--CeEEEeecCCCCCcccccccCCCCCCccce-------EEeCC
Q 008038 447 VYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGH--DFWVLGRGEGKFTKEDEKKFNLKNPPLKNT-------AVIFP 516 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~-~~~~~~~~~HP~HlHG~--~F~vv~~~~g~~~~~~~~~~~~~~p~~rDT-------v~vpp 516 (580)
.+.++.|+.|.+++.|.+ .+ .|-|-++.. .|.. . |...+. ..|.|
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~------~H~~~i~~~~~~~~~-------~------------~~~~~~~~~~~~~~~i~P 116 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGF------GHSFDITKKGPPYAV-------M------------PVIDPIVAGTGFSPVPKD 116 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESCCSCCCS-------S------------CCCCSEEEEBCCCCCCBT
T ss_pred EEEEeCCCEEEEEEEcCCCCe------eeEEEEeecCcchhc-------c------------ccccccccccccccccCC
Confidence 489999999999999963 33 566665532 1100 0 001111 25688
Q ss_pred Cc--EEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 517 YG--WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 517 ~g--~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
|+ ...+.|++ .||.|.||||+..|...||-+.+.+
T Consensus 117 G~sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 117 GKFGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp TBEEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred CCceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99 89999999 9999999999999999999998865
No 115
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.86 E-value=3.8e-05 Score=64.04 Aligned_cols=71 Identities=23% Similarity=0.292 Sum_probs=50.6
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|. |.+.. .|.+|+|... .|. + .+ ++-.+.||+...+.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~------~H~v~~~~~~-------~g~-~------------~~-~~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGE-A------------AL-KGPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS-S------------CE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEcCCC-------CCc-c------------cc-cccccCCCCEEEEEe--
Confidence 3899999999885 76655 7999988522 111 0 01 222367888766655
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||++ |. ||.+.+.|
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999998 65 99988865
No 116
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.82 E-value=3.8e-05 Score=65.84 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=50.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+|+ ++|. .. .|+++...- ..-+|.. ...+.||+++++.| +++|+|||+|-. |..
T Consensus 20 P~~i~V~~GdtV~--f~n~-d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF--~~~G~y~y~C~~--H~~ 83 (122)
T 2ux6_A 20 PASLKVAPGDTVT--FIPT-DK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF--TAPGVYGVKCTP--HPF 83 (122)
T ss_dssp SSEEEECTTEEEE--EEES-SS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEEETT--EEE
T ss_pred CCEEEECCCCEEE--EEEC-CC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe--CCCEEEEEEeCC--Ccc
Confidence 4789999999865 5576 32 455544431 1112221 23457899999888 689999999975 322
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
|.|.|+|.+.+
T Consensus 84 --M~G~I~V~~~p 94 (122)
T 2ux6_A 84 --MVGVVQVGDAP 94 (122)
T ss_dssp --EEEEEEESSSC
T ss_pred --CEEEEEEeCCC
Confidence 99999998743
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.64 E-value=0.00012 Score=79.10 Aligned_cols=76 Identities=22% Similarity=0.296 Sum_probs=60.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|.+.|.... ....|.|+++++.+. ..+.||....+.|++
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEEC
T ss_pred EEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEEC
Confidence 38899999999999995321 112688888765321 467889999999999
Q ss_pred cCceeeEEeee---cchhhhcccEEEEeccc
Q 008038 527 DNPGAWAFHCH---IEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCH---il~H~d~GM~~~~~~~~ 554 (580)
+.||.|.|||| ...|. ||.+.+.+.+
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 99999999999 45775 9999998754
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.51 E-value=0.0006 Score=57.95 Aligned_cols=86 Identities=19% Similarity=0.219 Sum_probs=56.8
Q ss_pred CCCCCeEEecC-CCEEEEEEEeCCCCCc-----eeeeec-----------cccccCCCCCCCCC----CC--ccccCCCC
Q 008038 58 QFPGPTIRARA-GDTIAVELTNKLYTEG-----VVIHWH-----------GIRQLGTPWADGTA----SI--SQCPINPG 114 (580)
Q Consensus 58 ~~pgP~l~v~~-Gd~v~v~v~N~l~~~~-----~siH~H-----------G~~~~~~~~~DG~~----~~--~q~~i~pG 114 (580)
+|--..|.|+. |++|+|+|+|. ...+ |++-+= |+.. + +.+|-+| .+ ....|.||
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~-G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~-~-~~~~y~~~~d~~via~t~~l~pG 90 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHP-GNLPKNVMGHNWVLSTAADMQGVVTDGMAS-G-LDKDYLKPDDSRVIAHTKLIGSG 90 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECC-SSCCHHHHCBCCEEEEHHHHHHHHHHHHHH-C-GGGTTSCTTCTTCCEECCCBCTT
T ss_pred EEecCEEEEecCCCEEEEEEEEC-CcccccccCceEEEcccchHHHHHHHHHhc-C-hhhccCCCCCccceeccceeCCC
Confidence 34457899976 99999999999 5543 444331 1111 0 1111121 11 11247999
Q ss_pred CeEEEEEEcC---CCcceeeecCcchhhccccEEEEEEE
Q 008038 115 ETYLYRFKVD---KAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 115 ~~~~y~f~~~---~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
++++..|+.. ++|+|.|.|. .|. ||.|.|+|.
T Consensus 91 es~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 91 EKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999999996 8999999999 555 899999983
No 119
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.10 E-value=0.0017 Score=53.09 Aligned_cols=79 Identities=10% Similarity=0.171 Sum_probs=53.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|. |.+.. .|-+.+....+ ...++. . ....+...+.||+...+.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~------~H~v~~~~~~~------p~g~~~---~------~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGF------PHNIVFDEDAV------PAGVDA---D------AISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECTTSS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEeCCCC------cccccc---c------cccccccccCCCCEEEEEc--
Confidence 3889999999986 65544 67666553110 001110 0 0113446788999877766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|-+ |..+||.+.+.|
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 899999999985 999999998865
No 120
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.03 E-value=0.0031 Score=54.77 Aligned_cols=73 Identities=19% Similarity=0.317 Sum_probs=54.4
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc---chh
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL---GMQ 138 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~---~~~ 138 (580)
..|.++.|++|++.++|. +..+++..-.+ |. ...+.||+.-++.|+++++|+|+|+|.- ..|
T Consensus 60 ~~l~Vp~G~~V~~~vts~--DV~Hsf~ip~~---------~~----k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP--DVIHGFHVEGT---------NI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS--SSCEEEEETTS---------SC----EEEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeC--CccceEEecCC---------Cc----eeEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 489999999999999998 33444332221 11 2356899999999999999999999962 233
Q ss_pred hccccEEEEEEEc
Q 008038 139 RSAGLYGSLIVDV 151 (580)
Q Consensus 139 ~~~Gl~G~liV~~ 151 (580)
.+|.|.++|.+
T Consensus 125 --~~M~g~v~V~~ 135 (135)
T 2cua_A 125 --QNMFGTIVVKE 135 (135)
T ss_dssp --TTCEEEEEEEC
T ss_pred --CCCEEEEEEEC
Confidence 57999999864
No 121
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.01 E-value=0.0019 Score=53.59 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=49.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|+ |.+.. .|.+++....- +.. .-++-.+.+|+...+.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~------~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVM------PHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------cEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--
Confidence 3889999999987 66555 67776653210 000 01233467888777666
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|-+ |. ||.+.+.|
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999987 76 99998865
No 122
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.99 E-value=0.0014 Score=56.00 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=50.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
++++.|++|+|+..+ . .|.+..+.. .++ .-.+.+.+.+|....+.| +
T Consensus 24 i~V~~GDTV~f~n~~---~------~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF--~ 70 (124)
T 3ef4_A 24 VKVEAGDTVKFVPTD---K------SHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA--E 70 (124)
T ss_dssp EEECTTCEEEEECSS---S------SCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--C
T ss_pred EEECCCCEEEEEECC---C------CccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--C
Confidence 889999999998543 3 677766521 111 001122345777655555 8
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.||.|.|||- .|...||.+.+.|+.
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 9999999995 899999999998864
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.97 E-value=0.0021 Score=54.84 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=50.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
++++.|++|+|++.| . .|-+..+.. .++ .. .+.+.+.||+...+.| +
T Consensus 23 i~V~~GdtV~f~~~~---~------~H~v~~~~~----------~~P-~g-----------~~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 23 VRAEPGDVINFVPTD---K------SHNVEAIKE----------ILP-EG-----------VESFKSKINESYTLTV--T 69 (123)
T ss_dssp EEECTTEEEEEEESS---T------TCCCEECTT----------SSC-TT-----------CCCCBCCTTCCEEEEE--C
T ss_pred EEECCCCEEEEEECC---C------CceEEEcCC----------cCC-CC-----------ccceecCCCCEEEEEe--C
Confidence 899999999998876 2 466655421 010 00 0112235677655555 8
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.||.|.|+|- .|...||.+.+.|+.
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 9999999999 899999999998863
No 124
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.88 E-value=0.0055 Score=55.05 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=57.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~ 139 (580)
...|.++.|+.|++.++|. +..++...-++.. +.-+.||+.-++.|+++++|+|++.|. .-...
T Consensus 92 Pn~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgi-------------k~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~ 156 (168)
T 3s8f_B 92 PNPIEVPQGAEIVFKITSP--DVIHGFHVEGTNI-------------NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 156 (168)
T ss_dssp SSSEEEETTSEEEEEEECS--SSCEEEEETTSSC-------------EEEECTTBCEEEEEECCSCEEEEEECCSCCSTT
T ss_pred cCEEEEeCCCeEEEEEecC--CceEEEEECCCCe-------------EEEecCCceeEEEEEeCCCEEEEEECCcCCCCC
Confidence 3689999999999999998 4444444333211 345679999999999999999999998 33344
Q ss_pred ccccEEEEEEEc
Q 008038 140 SAGLYGSLIVDV 151 (580)
Q Consensus 140 ~~Gl~G~liV~~ 151 (580)
-.+|.|-++|++
T Consensus 157 Hs~M~g~V~V~e 168 (168)
T 3s8f_B 157 HQNMFGTIVVKE 168 (168)
T ss_dssp GGGCEEEEEEEC
T ss_pred cCCCEEEEEEeC
Confidence 467999999973
No 125
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.87 E-value=0.0027 Score=54.99 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=49.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|+ |.+.. .|.+++.... .+. ..-++-.+.||+...+.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~------~H~v~~~~~~-------~g~--------------~~~~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVM------PHNVAFKKGI-------VGE--------------DAFRGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS--------------SCEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------ceEEEEeCCC-------CCc--------------ccccccccCCCCEEEEEc--
Confidence 3889999999986 76655 6877765321 000 001233467888777666
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||-+ |. ||.+.+.|
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 799999999986 76 99998865
No 126
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.85 E-value=0.0017 Score=55.75 Aligned_cols=73 Identities=21% Similarity=0.235 Sum_probs=48.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+..|. .|-+..+... ++ .. ...+.+.||+...+. +
T Consensus 24 ~i~V~~GDtVtf~n~~~---------~H~v~~~~~~----------~P-~g-----------~~~f~s~pGet~s~T--F 70 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---------GHNSALMKGG----------AP-EG-----------AETWKGKINEEITVT--L 70 (127)
T ss_dssp EEEECTTCEEEEECSSS---------SCCCEECTTC----------SC-TT-----------CCCCBCCTTCCCEEE--C
T ss_pred EEEECCCCEEEEEECCC---------CceEEEccCc----------CC-CC-----------ccceecCCCCEEEEE--e
Confidence 38999999999986652 3555544210 10 00 011223467765444 4
Q ss_pred cCceeeEEeeecchhhhcccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.||.|.|||- .|...||.+.+.|+.
T Consensus 71 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 71 SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 89999999999 699999999998764
No 127
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.18 E-value=0.01 Score=53.26 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=61.1
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-------ccccccCC--CCCCccceEEeCCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-------EDEKKFNL--KNPPLKNTAVIFPY 517 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-------~~~~~~~~--~~p~~rDTv~vpp~ 517 (580)
+.+ +.|+.|.|+|.|.+.. . -=-=+|.|.+...+. ++. .....+-. ....+..+..|.||
T Consensus 60 itV~kaG~~Vtv~~~N~g~~------p--~~~m~Hn~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQ------P--KASMGHNLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEETTCSSEEEEEEECSCS------C--HHHHCBCCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCC------c--cccccceEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 888 9999999999997643 2 000023444433211 000 00000000 01134456678999
Q ss_pred cEEEEEEEec--CceeeEEeeecchhhhcccEEEEecc
Q 008038 518 GWTALRFVAD--NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 518 g~v~irf~ad--npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+...|.|.++ .||.|-|+|-+-.|.. ||-+.|.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999999998 899988763
No 128
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.93 E-value=0.031 Score=47.93 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=61.5
Q ss_pred EEccCC-cEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-------c-cccccCC--CCCCccceEEeCC
Q 008038 448 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-------E-DEKKFNL--KNPPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~~~G-~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-------~-~~~~~~~--~~p~~rDTv~vpp 516 (580)
+.++.| +.|.+++.|.+.. . ---=+|.|.+...+. ... . ....+-. ....+..+..|.|
T Consensus 20 i~V~~G~~~vtv~~~N~g~~------~--~~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHM------P--KTGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------C--HHHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEcCCCeEEEEEEEECCCC------c--ccccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 889999 9999999997653 1 000024444443221 000 0 0000000 0112445667899
Q ss_pred CcEEEEEEEec---CceeeEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 9999999999999998 899988663
No 129
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.90 E-value=0.021 Score=48.58 Aligned_cols=36 Identities=28% Similarity=0.557 Sum_probs=29.1
Q ss_pred CCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 515 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 515 pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.||.... ++++.||.|.|+|- .|...||.+.+.|.+
T Consensus 59 ~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYV--LTVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEE--EECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEE--EEeCCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4677544 45589999999997 699999999998764
No 130
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.64 E-value=0.025 Score=48.13 Aligned_cols=37 Identities=24% Similarity=0.505 Sum_probs=29.7
Q ss_pred eCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 514 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 514 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.||+...+ +++.||.|.|+|- .|...||.+.+.|.+
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 357776554 4589999999997 599999999998764
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.62 E-value=0.046 Score=47.32 Aligned_cols=69 Identities=17% Similarity=0.315 Sum_probs=51.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.+.|.+. .|. |.+-+.+ . -+.+.||....+.|+++
T Consensus 62 l~Vp~G~~V~~~vts~DV-------~Hs-------f~ip~~~-----------------~---k~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPDV-------IHG-------FHVEGTN-----------------I---NVEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEE-------EEETTSS-----------------C---EEEECBTBCEEEEEECC
T ss_pred EEEcCCCEEEEEEEeCCc-------cce-------EEecCCC-----------------c---eeEeCCCCcEEEEEEcC
Confidence 889999999999998653 344 4432210 1 14466788888999999
Q ss_pred CceeeEEeeec---chhhhcccEEEEec
Q 008038 528 NPGAWAFHCHI---EPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHi---l~H~d~GM~~~~~~ 552 (580)
.||.|.++|.. ..| .+|-+.+.+
T Consensus 108 ~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 108 RPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp SCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 99999999987 667 488887765
No 132
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.27 E-value=0.076 Score=44.96 Aligned_cols=93 Identities=16% Similarity=0.219 Sum_probs=59.5
Q ss_pred EEccC-CcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC-CC-Cc---cc-ccccC-C-CCCCccceEEeCCCc
Q 008038 448 YMLGL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG-KF-TK---ED-EKKFN-L-KNPPLKNTAVIFPYG 518 (580)
Q Consensus 448 ~~~~~-G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g-~~-~~---~~-~~~~~-~-~~p~~rDTv~vpp~g 518 (580)
+.++. |+.|+++|.|.+.+ + --.=||.|.+...+.- .. .. .. ..+|- . ...+...|..|.||+
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~------p--~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL------P--KNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC------C--HHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCcc------c--ccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCc
Confidence 78875 99999999998754 1 1111466655532110 00 00 00 01111 0 123566788899999
Q ss_pred EEEEEEEec---CceeeEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...|.|.+. .+|.|-|-|- .|. ||-+.+.+
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999999997 8999999999 888 99998865
No 133
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.17 E-value=0.071 Score=56.69 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=57.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|++.|.... ....|.|.+.+... -+.+.||....+.|++
T Consensus 559 eI~VP~GdtVrfiLTN~D~v---eDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFta 608 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQI---EDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVA 608 (638)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEEC
T ss_pred EEEEecCceeEEEEecCCcC---CCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEc
Confidence 38899999999999996321 01167776654321 1357789999999999
Q ss_pred cCceeeEEeeecchhhh-cccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFH-IGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d-~GM~~~~~~~~ 554 (580)
+.||.|.++|...-|.. .+|.+.+.|.+
T Consensus 609 dkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 609 DKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999999765543 57988887754
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.92 E-value=0.1 Score=44.62 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=59.9
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc--cc------ccccCC-CC-CCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--ED------EKKFNL-KN-PPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~--~~------~~~~~~-~~-p~~rDTv~vpp 516 (580)
+.+ +.|+.|.+++.|.+.. + ---=+|.|.+...+. ... .+ ...+-. .+ ..+..+..|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKM------A--KVAMGHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------C--HHHHCBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCc------c--cccCcceEEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 788 8999999999997743 2 000023444433210 000 00 000000 01 12335667899
Q ss_pred CcEEEEEEEec--Ccee-eEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...|.|.++ .||. |-|.|-+-.|.. ||-+.+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7866 999999999998 899988763
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.77 E-value=0.082 Score=45.22 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=60.0
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc--cc------ccccCC-CC-CCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--ED------EKKFNL-KN-PPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~--~~------~~~~~~-~~-p~~rDTv~vpp 516 (580)
+.+ +.|+.|.+++.|.+.. + ---=+|.|.+...+. ... .+ ...+-. .+ ..+..+-.|.|
T Consensus 19 i~V~k~G~~vtv~~~N~g~~------p--~~~m~Hn~vi~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKL------P--KAAMGHNVVVSKKSD--ESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEECTTCSEEEEEEEECSCS------C--HHHHCBCCEEEETTH--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCcEEEEEEEECCCC------c--ccCCCceEEEccccc--hhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 788 8899999999997743 2 000023443332110 000 00 000000 01 12345667899
Q ss_pred CcEEEEEEEec--Ccee-eEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...+.|.+. .||. |-|.|-+-.|.. ||-+.+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999999999 999998764
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.50 E-value=0.11 Score=44.40 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=59.2
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC------CCCccccccc-CCCC-CCccceEEeCCCc
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG------KFTKEDEKKF-NLKN-PPLKNTAVIFPYG 518 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g------~~~~~~~~~~-~~~~-p~~rDTv~vpp~g 518 (580)
+.+ +.|+.|.+++.|.+.. + -=-=+|.|.+...+.. .........+ ...+ ..+..|-.|.||+
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSL------P--KNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------C--HHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCCC------c--ccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 888 8999999999997643 2 0000234433332100 0000000000 0001 1234455789999
Q ss_pred EEEEEEEec--Ccee-eEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~ 552 (580)
...+.|.+. .||. |-|.|-+-.|.. ||-+.+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999998 7887 999999999999 89998865
No 137
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=94.31 E-value=0.11 Score=44.03 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=45.4
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+ |.+. .|-+++..- .++. .. ..+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-------~H~v~~~~~----------~~p~-~~-----------~~~~~~~g~t~~~tF-- 68 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-------GHNVETIKG----------MIPD-GA-----------EAFKSKINENYKVTF-- 68 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-------SCCCEECTT----------CSCT-TC-----------CCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEE--ECCC-------CcEEEEccc----------ccCC-Cc-----------ceeecCCCCEEEEEe--
Confidence 3889999999986 4321 466666531 1110 00 011234677655555
Q ss_pred cCceeeEEeeecchhhhcccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.||.|.|+|-+ |.. |.+.+.|.+
T Consensus 69 ~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 69 TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 899999999976 776 999997754
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.24 E-value=0.37 Score=43.07 Aligned_cols=71 Identities=15% Similarity=0.256 Sum_probs=52.7
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|++.+.|.+- .|.| +|-+.+ . -+.+-||....+.|.++
T Consensus 95 l~VP~G~~Vr~~vTS~DV-------iHsf-------~IP~lg-----------------i---k~da~PG~~n~~~~~~~ 140 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPDV-------IHGF-------HVEGTN-----------------I---NVEVLPGEVSTVRYTFK 140 (168)
T ss_dssp EEEETTSEEEEEEECSSS-------CEEE-------EETTSS-----------------C---EEEECTTBCEEEEEECC
T ss_pred EEEeCCCeEEEEEecCCc-------eEEE-------EECCCC-----------------e---EEEecCCceeEEEEEeC
Confidence 889999999999999754 4544 442211 1 13456788888999999
Q ss_pred CceeeEEeeec-chhhhcccEEEEec
Q 008038 528 NPGAWAFHCHI-EPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHi-l~H~d~GM~~~~~~ 552 (580)
.||.|.+.|.. --+...+|.+.+.|
T Consensus 141 kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 141 RPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp SCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 99999999985 55566788887765
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=89.74 E-value=5.2 Score=33.37 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=54.3
Q ss_pred cCCEE--EEEEeecCCceeEEEEEe-CeeeEEEEE--CCcccC--------ceeeeeEEEcCCceEEEEEEeCC-CCCcc
Q 008038 239 PNKTY--RLRIASTTALASLNLAVK-NHKMVVVEA--DGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQ-DPSYN 304 (580)
Q Consensus 239 ~Ge~~--rlRliNag~~~~~~~~i~-gh~~~via~--DG~~v~--------P~~~d~v~l~pGeR~dv~v~~~~-~~~g~ 304 (580)
.|+.+ .|.+.|.+.. ...+.+. |+++.++-. +|..+- .+......|.|||...+-...++ .++|.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45554 7788898855 6777774 566555544 476651 44677899999999999999984 35799
Q ss_pred eEEEEeecCC
Q 008038 305 YWISAGVRGR 314 (580)
Q Consensus 305 y~l~~~~~~~ 314 (580)
|.+.+.....
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 9998876554
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=86.08 E-value=2.4 Score=38.90 Aligned_cols=74 Identities=14% Similarity=0.041 Sum_probs=55.2
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~~ 140 (580)
..|.+..|+.|++.|++. +..++...-.+.. +.-+-||..-...|.++++|+|+..|. .-...-
T Consensus 41 n~l~lP~g~~V~~~lTS~--DViHSF~IP~lgv-------------K~daiPGr~n~l~~~~~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN--SVMHSFFIPRLGS-------------QIYAMAGMQTRLHLIANEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES--SSCEEEEEGGGTE-------------EEEECTTCCEEEEECCSSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC--CceeeEEecccCc-------------EEEecCCceEEEEEEeCCCeEEEEEcccccccch
Confidence 479999999999999998 4555554444322 345678999999999999999999998 222223
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
..|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 4588888887
No 141
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=76.91 E-value=8.3 Score=36.96 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=54.9
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc-chhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL-GMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~-~~~~~ 140 (580)
..|.+..|+.|++.+++. +.-++...-.+.. +.-+-||..-...|.++++|+|+..|.- -...-
T Consensus 171 n~l~lP~g~~v~~~~tS~--DViHsf~ip~l~~-------------k~da~PG~~n~~~~~~~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA--DVIHSWTVPAFGV-------------KQDAVPGRLAQLWFRAEREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES--SSCEEEEEGGGTE-------------EEEECBTCCEEEEEECCSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC--cccceeeecccCc-------------eEEecCCceeEEEEecCCcEEEEEEChHhcccCc
Confidence 479999999999999998 4555555544432 2345678888889999999999999982 22222
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
+.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 347777777653
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=76.85 E-value=8.7 Score=37.49 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=56.0
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~~ 140 (580)
..|.+..|+.|++.+++. +.-|+...-.+.. +.-.-||..-...|.++++|+|+..|. .-...-
T Consensus 189 N~lvlP~g~~V~~~ltS~--DViHsf~iP~lg~-------------k~daiPG~~n~~~~~~~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT--DVIHAWTIPAFAV-------------KQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEES--SSCEEEEEGGGTE-------------EEEECTTCCEEEEEECSSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeC--CccceeeEcccCc-------------eEEecCCceEEEEEEeCCCEEEEEEcccccCcCc
Confidence 679999999999999998 4555555544432 334568988889999999999999998 222222
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
..|.+.+.+.++
T Consensus 254 s~M~~~v~vvs~ 265 (298)
T 3hb3_B 254 AYMPIVVKAVSQ 265 (298)
T ss_dssp TSCCEEEEEECH
T ss_pred cCCeeEEEEEcH
Confidence 447777887764
No 143
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=71.75 E-value=21 Score=32.71 Aligned_cols=60 Identities=10% Similarity=0.056 Sum_probs=45.1
Q ss_pred EEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 234 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 234 ~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
.+.++.|+.+||+|-+... .|.|.|..... .+..-||..-.+-+.+++ +|.|+.+|....
T Consensus 42 ~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgv----------------K~daiPGr~n~l~~~~~~--pG~y~g~CsE~C 101 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV--MHSFFIPRLGS----------------QIYAMAGMQTRLHLIANE--PGTYDGICAEIC 101 (205)
T ss_dssp EEEEETTSCEEEEEEESSS--CEEEEEGGGTE----------------EEEECTTCCEEEEECCSS--SEEEEEEECSCC
T ss_pred eEEEeCCCEEEEEEecCCc--eeeEEecccCc----------------EEEecCCceEEEEEEeCC--CeEEEEEccccc
Confidence 6899999999999998653 46666664433 334567888888888776 899999997544
No 144
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.53 E-value=60 Score=26.87 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=48.8
Q ss_pred ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC---CccccCCCCCeEEEEEEcC
Q 008038 48 KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS---ISQCPINPGETYLYRFKVD 124 (580)
Q Consensus 48 ~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~---~~q~~i~pG~~~~y~f~~~ 124 (580)
....+...|-+--.=+|+..-|.+..+.|.+. .++ ..| -|+||-.. +....|+||++.+|++..+
T Consensus 20 v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~-~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~ 87 (120)
T 3isy_A 20 IKFNMSLKNQSERAIEFQFSTGQKFELVVYDS-EHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWK 87 (120)
T ss_dssp EEEEEEEEECSSSCEEEEESSSCCEEEEEECT-TCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEES
T ss_pred EEEEEEEEcCCCCcEEEEeCCCCEEEEEEECC-CCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeC
Confidence 33334444544334568888888888888885 221 111 25777553 3456799999999999884
Q ss_pred ---CCcceeeecC
Q 008038 125 ---KAGTYFYHGH 134 (580)
Q Consensus 125 ---~~Gt~wYH~H 134 (580)
.+|+|..+.=
T Consensus 88 ~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 88 EVPEPGTYEVKVT 100 (120)
T ss_dssp SCCCSEEEEEEEE
T ss_pred CCCCCccEEEEEE
Confidence 5798876643
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=64.27 E-value=19 Score=33.63 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=53.1
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc--chhh
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL--GMQR 139 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~--~~~~ 139 (580)
..|.+..|..|++.++.. +.-||...-.+.. +.-.-||..-...|.++++|+|+..|.- +..
T Consensus 140 n~lvlP~~~~Vr~~vtS~--DViHsf~vP~lg~-------------K~DaiPGr~n~~~~~~~~~G~y~g~Cse~CG~~- 203 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE--DVLHSWAVPSLGL-------------KTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSN- 203 (227)
T ss_dssp SCEEEETTSCEEEEEEES--SSCEEEEEGGGTE-------------EEEECTTCCEEEEECCSSCEEEEECCCSCCSTT-
T ss_pred ceEEEecCCEEEEEEEeC--cccceeeecccCc-------------EEEecCCceEEEEEecCCcEEEEEEehhhcccc-
Confidence 689999999999999998 5556665554433 2334568888888999999999999972 221
Q ss_pred ccccEEEEEEEc
Q 008038 140 SAGLYGSLIVDV 151 (580)
Q Consensus 140 ~~Gl~G~liV~~ 151 (580)
-+-|.+.+.+.+
T Consensus 204 Hs~M~~~v~vv~ 215 (227)
T 1v54_B 204 HSFMPIVLELVP 215 (227)
T ss_dssp GGGCCEEEEEEC
T ss_pred cccCeEEEEEEc
Confidence 123666666664
No 146
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=56.42 E-value=87 Score=26.11 Aligned_cols=70 Identities=16% Similarity=0.100 Sum_probs=46.0
Q ss_pred EEecCCEE--EEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 236 HVQPNKTY--RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 236 ~v~~Ge~~--rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
.+.+|+.+ +..+-|.|....-.+.+ .+. +||..+. ...+.|++|+.-+|.+.......|+|.|.+....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 45667776 66788999765433332 222 2666443 2245799999999988876545789998886544
Q ss_pred C
Q 008038 314 R 314 (580)
Q Consensus 314 ~ 314 (580)
.
T Consensus 99 ~ 99 (127)
T 3idu_A 99 E 99 (127)
T ss_dssp T
T ss_pred C
Confidence 3
No 147
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=54.65 E-value=25 Score=34.18 Aligned_cols=72 Identities=17% Similarity=0.162 Sum_probs=50.4
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
-+.++.|+.|++.+.+.+-+ |+|+|-+.+ .. +.+-||....+.|.+
T Consensus 190 ~lvlP~g~~V~~~ltS~DVi--------------Hsf~iP~lg-----------------~k---~daiPG~~n~~~~~~ 235 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATDVI--------------HAWTIPAFA-----------------VK---QDAVPGRIAQLWFSV 235 (298)
T ss_dssp CEEEESSSEEEEEEEESSSC--------------EEEEEGGGT-----------------EE---EEECTTCCEEEEEEC
T ss_pred eEEEEcCCEEEEEEEeCCcc--------------ceeeEcccC-----------------ce---EEecCCceEEEEEEe
Confidence 38899999999999997754 455553321 11 234467778899999
Q ss_pred cCceeeEEeeecchhhh-cccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFH-IGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d-~GM~~~~~~ 552 (580)
+.||.|...|...--.. ..|-.++++
T Consensus 236 ~~~G~y~g~CsE~CG~~Hs~M~~~v~v 262 (298)
T 3hb3_B 236 DQEGVYFGQCSELCGINHAYMPIVVKA 262 (298)
T ss_dssp SSSEEEEECCCSCCSTTTTSCCEEEEE
T ss_pred CCCEEEEEEcccccCcCccCCeeEEEE
Confidence 99999999999654443 345555543
No 148
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=50.29 E-value=20 Score=35.27 Aligned_cols=74 Identities=14% Similarity=0.037 Sum_probs=53.7
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~~ 140 (580)
..|.+..|..|++.++.. +.-|+...-.+.. +.-.-||..-...|.++++|+|+..|. .-...-
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~-------------k~DaiPGr~n~~~~~~~~~G~y~g~CsE~CG~~H 215 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGS-------------QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTE-------------EEEECBTSCEEEEEECCSCBCCEEBCCSCCSTTT
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCc-------------EEeecCCcceeeEEecCCCeEEEEeccccchhhH
Confidence 578999999999999988 5555555554432 344567888888999999999999997 222222
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
+.|.+.++|.
T Consensus 216 s~M~~~v~vv 225 (315)
T 1fft_B 216 SGMKFKAIAT 225 (315)
T ss_dssp TTCCEECCBC
T ss_pred HhccceEEEe
Confidence 3477777776
No 149
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=48.19 E-value=44 Score=27.39 Aligned_cols=46 Identities=24% Similarity=0.371 Sum_probs=30.6
Q ss_pred EEEEEEeecCCc-eeEEEEEeCe-eeEEEEECCcccCceeeeeEEEcCCceEEEEEEe
Q 008038 242 TYRLRIASTTAL-ASLNLAVKNH-KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT 297 (580)
Q Consensus 242 ~~rlRliNag~~-~~~~~~i~gh-~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~ 297 (580)
.|+|+|+|.+.. ..+.+++.|. .++++ | +. .+.|.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEE
Confidence 589999999966 3366666663 23332 2 11 4999999977766554
No 150
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=45.86 E-value=20 Score=29.57 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=0.0
Q ss_pred EEEEcCCCcceeeecCcchhhccccEEEE-EEEcCCCCCCC
Q 008038 119 YRFKVDKAGTYFYHGHLGMQRSAGLYGSL-IVDVADGEKEP 158 (580)
Q Consensus 119 y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~l-iV~~~~~~~~p 158 (580)
..+++..+|++||-|-...|=..||..+| .|.+......|
T Consensus 72 ~~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~~~~~ 112 (116)
T 1x9u_A 72 VKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGA 112 (116)
T ss_dssp EEEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-------
T ss_pred eEEEECCCCCEEEECCCCCccccCCEEEEEEECCCCCCCCC
No 151
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=44.08 E-value=45 Score=31.79 Aligned_cols=71 Identities=23% Similarity=0.278 Sum_probs=49.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
-+.++.|+.|++.+.+.+-+ |+|+|-+.+ ...| +-||....+.|.+
T Consensus 172 ~l~lP~g~~v~~~~tS~DVi--------------Hsf~ip~l~-----------------~k~d---a~PG~~n~~~~~~ 217 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGADVI--------------HSWTVPAFG-----------------VKQD---AVPGRLAQLWFRA 217 (262)
T ss_dssp CEEEETTSEEEEEEEESSSC--------------EEEEEGGGT-----------------EEEE---ECBTCCEEEEEEC
T ss_pred eEEEecCCEEEEEEEECccc--------------ceeeecccC-----------------ceEE---ecCCceeEEEEec
Confidence 38899999999999987654 455554321 1223 3467777899999
Q ss_pred cCceeeEEeeecchhhhcc-cEEEEe
Q 008038 527 DNPGAWAFHCHIEPHFHIG-MGVVLA 551 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~G-M~~~~~ 551 (580)
+.||.|...|--.--.... |-..+.
T Consensus 218 ~~~G~y~g~Cse~CG~~H~~M~~~v~ 243 (262)
T 2gsm_B 218 EREGIFFGQCSELCGISHAYMPITVK 243 (262)
T ss_dssp CSCEEEEECCCSCCSTTGGGCCEEEE
T ss_pred CCcEEEEEEChHhcccCcccCeEEEE
Confidence 9999999999865554433 545443
No 152
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=40.33 E-value=1.1e+02 Score=24.98 Aligned_cols=68 Identities=18% Similarity=0.148 Sum_probs=39.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC-------C-CccccCCCCCeEEEEEEcCCCcce
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA-------S-ISQCPINPGETYLYRFKVDKAGTY 129 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~-------~-~~q~~i~pG~~~~y~f~~~~~Gt~ 129 (580)
|-+|+++.||++.|.|.-+ .....+=......-......+|.- . ...-.+..|....+.|++.++|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~N-PtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGN-PTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKPRKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECC-TTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEECSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCC-CCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEEeCCceE
Confidence 4589999999999999987 554444433321100000011100 0 001235667889999999888863
No 153
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=40.12 E-value=43 Score=31.13 Aligned_cols=71 Identities=17% Similarity=0.286 Sum_probs=49.7
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|++.+...+-. |+|+|-+.+ ...| .-||....+.|.+
T Consensus 141 ~lvlP~~~~Vr~~vtS~DVi--------------Hsf~vP~lg-----------------~K~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 141 RVVLPMEMTIRMLVSSEDVL--------------HSWAVPSLG-----------------LKTD---AIPGRLNQTTLMS 186 (227)
T ss_dssp CEEEETTSCEEEEEEESSSC--------------EEEEEGGGT-----------------EEEE---ECTTCCEEEEECC
T ss_pred eEEEecCCEEEEEEEeCccc--------------ceeeecccC-----------------cEEE---ecCCceEEEEEec
Confidence 38899999999999987654 455554321 1233 3457777889999
Q ss_pred cCceeeEEeeecchhhhcc-cEEEEe
Q 008038 527 DNPGAWAFHCHIEPHFHIG-MGVVLA 551 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~G-M~~~~~ 551 (580)
+.||.|...|.-.-..... |-.+++
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~ 212 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLE 212 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEE
T ss_pred CCcEEEEEEehhhcccccccCeEEEE
Confidence 9999999999866555444 444443
No 154
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=34.14 E-value=85 Score=29.22 Aligned_cols=56 Identities=11% Similarity=0.099 Sum_probs=30.7
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEE
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 293 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv 293 (580)
..|..+-|-++.++|-|.+....+. . .--.|..||....=.....|.|.|||.+.+
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~----~-~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTA----D-SDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBC----C-SCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCcccc----C-CCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 3566666666777777765431110 1 112224455421112346799999999887
No 155
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=34.12 E-value=29 Score=28.25 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=29.5
Q ss_pred EEEEcCCCcceeeecCcchhhccccEEEEEEEcCC
Q 008038 119 YRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 119 y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~ 153 (580)
..|++..+|++||-|-...|=..||..+|.|....
T Consensus 72 ~~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~~ 106 (109)
T 1ws8_A 72 DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGS 106 (109)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEECC--
T ss_pred EEEEECCCcCEEEECCCCCcccCCCEEEEEEcCCC
Confidence 46888999999999998888889999999997643
No 156
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=33.30 E-value=59 Score=31.83 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=49.7
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|++.+...+-+ |+|+|-+.+ ...| +-||....+.|.++
T Consensus 153 l~lP~g~~V~~~lTS~DVi--------------Hsf~IP~lg-----------------~k~D---aiPGr~n~~~~~~~ 198 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNSVM--------------NSFFIPRLG-----------------SQIY---AMAGMQTRLHLIAN 198 (315)
T ss_dssp CCCCSSSEEEEEECBSSSC--------------EEEEEGGGT-----------------EEEE---ECBTSCEEEEEECC
T ss_pred EEEeCCCEEEEEEEeCCcc--------------ceeeecccC-----------------cEEe---ecCCcceeeEEecC
Confidence 7789999999999987654 455554321 1223 34577788999999
Q ss_pred CceeeEEeeecchhhhcc-cEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIG-MGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~G-M~~~~~~ 552 (580)
.||.|...|-..--.... |-..+.+
T Consensus 199 ~~G~y~g~CsE~CG~~Hs~M~~~v~v 224 (315)
T 1fft_B 199 EPGTYDGISASYSGPGFSGMKFKAIA 224 (315)
T ss_dssp SCBCCEEBCCSCCSTTTTTCCEECCB
T ss_pred CCeEEEEeccccchhhHHhccceEEE
Confidence 999999999866555444 5555544
No 157
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=31.63 E-value=1e+02 Score=25.66 Aligned_cols=68 Identities=28% Similarity=0.398 Sum_probs=37.9
Q ss_pred EEcCCCCCCeEEecCCCEEEEEEE---eCCCCCceeeeec----cccccC-CCCCCCCCCCccccCCCCCeEEEEEEc
Q 008038 54 GINGQFPGPTIRARAGDTIAVELT---NKLYTEGVVIHWH----GIRQLG-TPWADGTASISQCPINPGETYLYRFKV 123 (580)
Q Consensus 54 ~~NG~~pgP~l~v~~Gd~v~v~v~---N~l~~~~~siH~H----G~~~~~-~~~~DG~~~~~q~~i~pG~~~~y~f~~ 123 (580)
.++|- +.+.=.+++|..+.+.+. |. .........| |+..+- .+..|+=..-..|||.+|+.++|.+.+
T Consensus 19 ~V~~C-~~~PC~l~rG~~~~i~i~f~~~~-~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 19 NVSPC-PTQPCKLHRGQSYSVNVTFTSNT-QSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEESC-SSSSEEEETTCEEEEEEEEEESS-CBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EECCC-CCCCCEEEcCCeEEEEEEEEccc-ccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 44543 235566788888777766 33 2222233333 444321 122344321247999999999998765
No 158
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=30.38 E-value=1.6e+02 Score=24.18 Aligned_cols=66 Identities=27% Similarity=0.326 Sum_probs=37.3
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC--------CCCcc--------ccCCCCCeEEEEEEcC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT--------ASISQ--------CPINPGETYLYRFKVD 124 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~--------~~~~q--------~~i~pG~~~~y~f~~~ 124 (580)
+-+|+++.||++.|.|.-+ .....+=...+..-. .-.||. |.... ..+..|....+.|++.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~N-PtTGY~W~~~~~~~~--~l~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka~ 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESN-PTTGYTWLRSGLAGT--ELSDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKAL 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCC-CCCCeEEEEecCccc--cCCCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEEe
Confidence 3469999999999999877 544443333331100 001110 00000 1355677888888888
Q ss_pred CCcce
Q 008038 125 KAGTY 129 (580)
Q Consensus 125 ~~Gt~ 129 (580)
++|+.
T Consensus 89 ~~G~~ 93 (121)
T 2cio_B 89 KAGKH 93 (121)
T ss_pred cCceE
Confidence 88874
No 159
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=28.85 E-value=57 Score=27.73 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=30.6
Q ss_pred EEEc-CCCcceeeecCcchhhccccEEEEEEEcCCC
Q 008038 120 RFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 120 ~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~ 154 (580)
.|++ .++|++||-|-...|=..||..+|.|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 6888 8999999999998888999999999987544
No 160
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=27.57 E-value=1.6e+02 Score=29.10 Aligned_cols=69 Identities=22% Similarity=0.170 Sum_probs=42.5
Q ss_pred EEEEEEeecCCceeEEEE---Ee---CeeeEEEEECCcccC----------ceeeeeEEEcCCceEEEEEEeCCC----C
Q 008038 242 TYRLRIASTTALASLNLA---VK---NHKMVVVEADGNYVQ----------PFEVDDMDIYSGESYSVLLTTNQD----P 301 (580)
Q Consensus 242 ~~rlRliNag~~~~~~~~---i~---gh~~~via~DG~~v~----------P~~~d~v~l~pGeR~dv~v~~~~~----~ 301 (580)
++..-|-|.|....--|. ++ -..|.| ..||..++ |..-+.+.|+|||.+++.|++... .
T Consensus 39 ~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs~ 117 (343)
T 2x3c_A 39 RVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMSA 117 (343)
T ss_dssp EEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCCS
T ss_pred EEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccCC
Confidence 455666666654321111 12 235555 46776652 223467999999999999999642 4
Q ss_pred CcceEEEEee
Q 008038 302 SYNYWISAGV 311 (580)
Q Consensus 302 ~g~y~l~~~~ 311 (580)
+|+|.++...
T Consensus 118 gG~y~v~~~g 127 (343)
T 2x3c_A 118 QGQYSIRYQL 127 (343)
T ss_dssp CEEEEEEEC-
T ss_pred CceEEEEEee
Confidence 6889888754
No 161
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=27.49 E-value=2.3e+02 Score=23.65 Aligned_cols=65 Identities=20% Similarity=0.287 Sum_probs=37.9
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC--------CCCccccCCCCCeEEEEEEcCCCcce
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT--------ASISQCPINPGETYLYRFKVDKAGTY 129 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~--------~~~~q~~i~pG~~~~y~f~~~~~Gt~ 129 (580)
|-+|+++.||++.|.|.-+ .....+=...... +..-.|++ |.- .-.+..|....+.|++.++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~N-PTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~~-~~~vGagG~~~w~f~A~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSN-PTTGFAWYFEGGT--KESPNESMFTVENKYFPPD-SKLLGAGGTEHFHVTVKAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEEC-GGGSCEEEBTTTB--SSCSCTTTEEEEEEEECCT-TCCTTCCEEEEEEEEECSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCC-CCCCeEEEEecCC--CccccccceeecceeeeCC-CCCcCCCcEEEEEEEEccCceE
Confidence 5689999999999999987 5433332222211 00011221 110 1135567788888888888864
No 162
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=27.46 E-value=62 Score=27.06 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCc---eeeeeccccccCCCCC---CCCCCCccccCCCCCeEEEE
Q 008038 73 AVELTNKLYTEG---VVIHWHGIRQLGTPWA---DGTASISQCPINPGETYLYR 120 (580)
Q Consensus 73 ~v~v~N~l~~~~---~siH~HG~~~~~~~~~---DG~~~~~q~~i~pG~~~~y~ 120 (580)
.|++.|. ...+ .+=||.=....+.... +||-|- |--|.||++|+|.
T Consensus 34 ~I~I~N~-~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~-qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 34 SIRIQNA-GAVPARLVARHWQITDGNGRTEQVDGEGVVGE-QPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEEETTSCEEEEEESSBTTB-CCEECTTCEEEEE
T ss_pred EEEEEeC-CCCCEEEEeceEEEEeCCCCEEEEECCCeecC-CCcCCCCCceEEe
No 163
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=27.40 E-value=1.5e+02 Score=23.10 Aligned_cols=69 Identities=12% Similarity=0.107 Sum_probs=37.0
Q ss_pred EecCCEEEEEEeecCCceeEEEEEeCe--eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCC-CCcceEEEEee
Q 008038 237 VQPNKTYRLRIASTTALASLNLAVKNH--KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-PSYNYWISAGV 311 (580)
Q Consensus 237 v~~Ge~~rlRliNag~~~~~~~~i~gh--~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~-~~g~y~l~~~~ 311 (580)
-+|||++++|++-.... ... ..+- .+++..-+|..+. .-.........+...+.++.+ ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~-~~p--~~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDEN-FHP--LNELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGG-GCB--CCCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCC-CcC--CCCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 46899999998754322 111 1111 3344444444221 111222344567777777654 35889998764
No 164
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=27.26 E-value=1.1e+02 Score=25.46 Aligned_cols=68 Identities=16% Similarity=0.227 Sum_probs=37.2
Q ss_pred EEcCCCCCCeEEecCCCEEEEEEE---eCCCCCc--eeeee--ccccccC-CCCCCCCCCCccccCCCCCeEEEEEEc
Q 008038 54 GINGQFPGPTIRARAGDTIAVELT---NKLYTEG--VVIHW--HGIRQLG-TPWADGTASISQCPINPGETYLYRFKV 123 (580)
Q Consensus 54 ~~NG~~pgP~l~v~~Gd~v~v~v~---N~l~~~~--~siH~--HG~~~~~-~~~~DG~~~~~q~~i~pG~~~~y~f~~ 123 (580)
.++|--+.+.=.+++|..+.+.+. |. .... +.+|+ .|+..+- ....|+=-+ ..|||.+|+.++|.+..
T Consensus 17 ~V~~C~~~~pC~l~rG~~~~i~~~f~~~~-~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 17 MVDGCHGSDPCIIHRGKPFTLEALFDANQ-NTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EETTCCBTSCEEEETTSEEEEEEEEECCS-CBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EECCCCCCCCCEEeCCCeEEEEEEEECCC-ccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 444431234556778887777766 22 1222 23332 3444421 122333222 57999999999999765
No 165
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=25.90 E-value=33 Score=28.79 Aligned_cols=18 Identities=17% Similarity=0.289 Sum_probs=15.9
Q ss_pred EEEEecCCEEEEEEeecC
Q 008038 234 ILHVQPNKTYRLRIASTT 251 (580)
Q Consensus 234 ~~~v~~Ge~~rlRliNag 251 (580)
.|+|+.||+|||.+.|-+
T Consensus 72 ~InV~~GETVrF~v~nkt 89 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKI 89 (131)
T ss_dssp EEEEETTCEEEEEETTEE
T ss_pred EEEecCCCEEEEEeCCcE
Confidence 499999999999998865
No 166
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=24.92 E-value=63 Score=26.97 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=26.0
Q ss_pred EEEEEeCCCCCc---eeeeeccccccCC---CCCCCCCCCccccCCCCCeEEEEE
Q 008038 73 AVELTNKLYTEG---VVIHWHGIRQLGT---PWADGTASISQCPINPGETYLYRF 121 (580)
Q Consensus 73 ~v~v~N~l~~~~---~siH~HG~~~~~~---~~~DG~~~~~q~~i~pG~~~~y~f 121 (580)
.|++.|. ...+ .+=||.=....+. ..-+||-|- |--|.||++|+|.=
T Consensus 33 ~I~I~N~-~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~-qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 33 LITIKNL-SSQTVQLMSRRWLITDADGKQTVVEGDGVVGE-QPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEEETTCCEEEEEEESBTTB-CCEECTTCEEEEEE
T ss_pred EEEEEEC-CCCCEEEEecEEEEEeCCCCEEEEECCceEcC-CCcCCCCCceEEeC
Confidence 4677777 4544 3556663322111 122555443 56679999888763
No 167
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=22.99 E-value=80 Score=26.86 Aligned_cols=46 Identities=26% Similarity=0.321 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCc---eeeeeccccccCCCCC---CCCCCCccccCCCCCeEEEE
Q 008038 73 AVELTNKLYTEG---VVIHWHGIRQLGTPWA---DGTASISQCPINPGETYLYR 120 (580)
Q Consensus 73 ~v~v~N~l~~~~---~siH~HG~~~~~~~~~---DG~~~~~q~~i~pG~~~~y~ 120 (580)
.|++.|. ...+ .+=||.=....+.... +||-|- |--|.||++|+|.
T Consensus 38 ~ItI~N~-~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGe-qPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNT-GSHPAQVISRHWIITDGEERVQEVRGLGVVGQ-QPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEECTTSCEEEEEEESSSSC-CCEECTTCEEEEE
T ss_pred EEEEEeC-CCCCEEEEecEEEEEeCCCCEEEEECCCeecC-CCcCCCCCceEEc
No 168
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=22.41 E-value=41 Score=26.74 Aligned_cols=24 Identities=25% Similarity=0.196 Sum_probs=21.2
Q ss_pred EEEEEcCCCCCCeEEecCCCEEEE
Q 008038 51 IVMGINGQFPGPTIRARAGDTIAV 74 (580)
Q Consensus 51 ~~~~~NG~~pgP~l~v~~Gd~v~v 74 (580)
....+||++-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 478999998778889999999987
No 169
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=22.06 E-value=2.7e+02 Score=23.22 Aligned_cols=73 Identities=15% Similarity=0.335 Sum_probs=41.6
Q ss_pred EEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeec---c--ccccCCC-CCCCCCCCccccCCCCCeEEEEEEcCCCc
Q 008038 54 GINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWH---G--IRQLGTP-WADGTASISQCPINPGETYLYRFKVDKAG 127 (580)
Q Consensus 54 ~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~H---G--~~~~~~~-~~DG~~~~~q~~i~pG~~~~y~f~~~~~G 127 (580)
.+.-.--|-+|+++.||++.|.|.-+ .....+=... | +...... +.+. + ...-.+..|....+.|++.++|
T Consensus 27 ~~~~~~~g~tI~v~~Ge~~~I~L~~N-PTTGY~W~~~~~~~~vl~~l~~~~y~~~-~-~~~~~vGagG~~~w~f~A~~~G 103 (132)
T 2wgn_B 27 TLDDADDCSPLKLTQGQELVLTLPSN-PTTGFRWELRNPAASVLKRLGPEVYSNS-E-EDSGLVGSGGESTWRFRVAASG 103 (132)
T ss_dssp CCCCSSCCSCEEECTTCEEEEEECCC-TTTSCEEEEEECCTTTEEECCSCCSCSS-C-SSCCCSSSSCCEEEEEEECSCE
T ss_pred EEecccCCcEEEEcCCCEEEEEeCCC-CCCCeEEEEecCCCceEEecccceecCC-C-CccCCcCCCceEEEEEEEcCCc
Confidence 34444456679999999999999877 5433322222 1 1111100 1111 0 0112355678888999998888
Q ss_pred ce
Q 008038 128 TY 129 (580)
Q Consensus 128 t~ 129 (580)
+.
T Consensus 104 ~~ 105 (132)
T 2wgn_B 104 DD 105 (132)
T ss_dssp EE
T ss_pred eE
Confidence 64
No 170
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=20.69 E-value=96 Score=24.38 Aligned_cols=29 Identities=10% Similarity=0.216 Sum_probs=25.5
Q ss_pred EEEcCCCcceeeecCcchhhccccEEEEEE
Q 008038 120 RFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149 (580)
Q Consensus 120 ~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV 149 (580)
.+++ .+|++||-|-...|=..||..+|.|
T Consensus 67 ~v~L-~~g~~yFic~~~~HC~~Gmkl~I~V 95 (96)
T 2cbp_A 67 QIKL-PKGQSYFICNFPGHCQSGMKIAVNA 95 (96)
T ss_dssp EEEC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEe-cCCCEEEEcCCCCccccCCEEEEEE
Confidence 6777 8999999999888888999988876
No 171
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=20.53 E-value=82 Score=26.26 Aligned_cols=53 Identities=15% Similarity=0.275 Sum_probs=32.0
Q ss_pred EEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC----ceeeeeEEEcCCceEEEEEEe
Q 008038 242 TYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTT 297 (580)
Q Consensus 242 ~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v~~ 297 (580)
.|++||-|.+.. .+.|-...+.+...||..-+ ..-...=.|.|||.+...=-+
T Consensus 31 aY~I~I~N~~~~---~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 31 AYLITIKNLSSQ---TVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEEEECSSS---CEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCC---CEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCc
Confidence 479999999865 35555555666565554221 112234579999987765433
No 172
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=20.30 E-value=74 Score=26.88 Aligned_cols=46 Identities=20% Similarity=0.296 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCc---eeeeeccccccCCCCC---CCCCCCccccCCCCCeEEEE
Q 008038 73 AVELTNKLYTEG---VVIHWHGIRQLGTPWA---DGTASISQCPINPGETYLYR 120 (580)
Q Consensus 73 ~v~v~N~l~~~~---~siH~HG~~~~~~~~~---DG~~~~~q~~i~pG~~~~y~ 120 (580)
.|++.|. ...+ .+=||.=....+.... +||-|- |--|.||++|+|.
T Consensus 33 ~ItI~N~-~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGe-qP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINL-GEQAAKLETRHWIITDANGKTSEVQGAGVVGE-TPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEEETTSCEEEEEEESBTTB-CCEECTTEEEEEE
T ss_pred EEEEEeC-CCCCEEEEecEEEEEeCCCCEEEEEcCceEcC-CCcCCCCCceEEc
Done!