BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008039
(580 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis
thaliana GN=TTL3 PE=1 SV=2
Length = 691
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 228 TESESVSQLLSHIKLLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMH 287
T E VS +L+++K+++R RT +G +SEA + DG + + C +
Sbjct: 444 TNPEVVS-VLNNVKMVVRARTRGNELFSSGRFSEACVAYG---DGLKQDDSNSVLYC--N 497
Query: 288 RAFAYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIRCLPDCLHDLEHLKLLYN 347
RA + G +S+ DCN L +PS I+AL RA + D + D E L+
Sbjct: 498 RAACWYKLGLWEKSVEDCNHALKSQPSYIKALLRRAASYGKLGRWEDAVKDYEFLR---- 553
Query: 348 AILRDRKLPG 357
R+LPG
Sbjct: 554 -----RELPG 558
>sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana
GN=TTL4 PE=2 SV=1
Length = 682
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 228 TESESVSQLLSHIKLLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMH 287
+ S V +L+++K + + RT +G YSEA + DG + F + Y +
Sbjct: 434 SNSPEVVSVLNNVKNVAKARTRGNELFSSGRYSEASVAYG---DGLK--LDAFNSVLYCN 488
Query: 288 RAFAYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIRCLPDCLHDLEHLKLLYN 347
RA + G +S+ DCN+ L ++PS +AL RA + D + D E L+
Sbjct: 489 RAACWFKLGMWEKSVDDCNQALRIQPSYTKALLRRAASYGKLGRWEDAVRDYEVLR---- 544
Query: 348 AILRDRKLPG 357
++LPG
Sbjct: 545 -----KELPG 549
>sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2
SV=2
Length = 354
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 395 NVDYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
N DYYA++GL + CS E+ +A+ LSL+ PDK
Sbjct: 97 NNDYYAILGLEKNCSVDEIRKAYRKLSLKVHPDK 130
>sp|B8F7S3|DNAJ_HAEPS Chaperone protein DnaJ OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=dnaJ PE=3 SV=1
Length = 378
Score = 39.7 bits (91), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S E++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLQKGASEQEIKRAYKRLAAKHHPDK 36
>sp|B2TLZ8|DNAJ_CLOBB Chaperone protein DnaJ OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=dnaJ PE=3 SV=1
Length = 373
Score = 39.7 bits (91), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 395 NVDYYALIGLRRGCSRSELERAHLLLSLRHKPDKAISFTE 434
N DYY ++GL++G S E+++A L++++ PDK TE
Sbjct: 3 NKDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTE 42
>sp|B2V2I6|DNAJ_CLOBA Chaperone protein DnaJ OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=dnaJ PE=3 SV=1
Length = 373
Score = 39.3 bits (90), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 395 NVDYYALIGLRRGCSRSELERAHLLLSLRHKPDKAISFTE 434
N DYY ++GL++G S E+++A L++++ PDK TE
Sbjct: 3 NKDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTE 42
>sp|Q75Q39|TOM70_RAT Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus
GN=Tomm70a PE=1 SV=1
Length = 610
Score = 39.3 bits (90), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 254 LDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRIAESIADCNKTLALEP 313
AG Y +AI+ +++ + L+ Y +RA A+ + E DC K + L P
Sbjct: 127 FKAGKYEQAIQCYTEAISLCPTEKNADLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNP 186
Query: 314 SCIQALDTRALLLETIRCLPDCLHDL 339
++AL RA E + +CL D+
Sbjct: 187 KYVKALFRRAKAHEKLDNKKECLEDV 212
>sp|P43735|DNAJ_HAEIN Chaperone protein DnaJ OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=dnaJ PE=3 SV=1
Length = 382
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S E++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLQKGASEDEIKRAYKRLASKHHPDK 36
>sp|A6LRN5|DNAJ_CLOB8 Chaperone protein DnaJ OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=dnaJ PE=3 SV=1
Length = 377
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 395 NVDYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
N DYY L+GL++G S E++RA L++++ PD+
Sbjct: 3 NKDYYELLGLQKGASDDEIKRAFRKLAVKYHPDR 36
>sp|Q4KIH0|DNAJ_PSEF5 Chaperone protein DnaJ OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=dnaJ PE=3 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S +EL++A+ L+++H PD+
Sbjct: 5 DYYEVLGVERGSSDAELKKAYRRLAMKHHPDR 36
>sp|Q04737|Y751_SYNY3 TPR repeat-containing protein slr0751 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0751 PE=4 SV=1
Length = 248
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 256 AGLYSEAIRHFSKIVDGRRGA---PQGFLAECYMHRAFAYRSSGRIAESIADCNKTLALE 312
LYS+ H + I D + P + + Y +RA +Y G+ A++IAD N+ L L
Sbjct: 136 GNLYSQQQDHHTAIQDFTQAITYDPNRY--KAYYNRANSYFQLGQYAQAIADYNRVLVLR 193
Query: 313 PSCIQALDTRAL 324
P I A+ R L
Sbjct: 194 PDYINAIYNRGL 205
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 250 AIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRIAESIADCNKTL 309
+ A +AG Y+EA+ FS +++ +P E + +R A+ G + ++IAD +++
Sbjct: 68 GVKAGEAGNYAEAVELFSVVLNLSPDSP-----ETHYNRGLAWERLGNVDQAIADYGRSI 122
Query: 310 ALEPSCIQALDTRALL 325
AL+ I R L
Sbjct: 123 ALDRYYIPPYINRGNL 138
>sp|A5UF67|DNAJ_HAEIG Chaperone protein DnaJ OS=Haemophilus influenzae (strain PittGG)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S ++++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLKKGASENDIKRAYKRLASKHHPDK 36
>sp|Q6VAY5|DNAJ_PSEST Chaperone protein DnaJ OS=Pseudomonas stutzeri GN=dnaJ PE=3 SV=1
Length = 376
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
D+Y ++G+ RG S +EL++A+ L+++H PD+
Sbjct: 5 DFYEVLGVERGASEAELKKAYRRLAMKHHPDR 36
>sp|O94826|TOM70_HUMAN Mitochondrial import receptor subunit TOM70 OS=Homo sapiens
GN=TOMM70A PE=1 SV=1
Length = 608
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 254 LDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRIAESIADCNKTLALEP 313
AG Y +AI+ +++ + L+ Y +RA A+ + E DC K + L P
Sbjct: 125 FKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNP 184
Query: 314 SCIQALDTRALLLETIRCLPDCLHDL 339
++AL RA E + +CL D+
Sbjct: 185 KYVKALFRRAKAHEKLDNKKECLEDV 210
>sp|A3N3J9|DNAJ_ACTP2 Chaperone protein DnaJ OS=Actinobacillus pleuropneumoniae serotype
5b (strain L20) GN=dnaJ PE=3 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S ++++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLQKGASENDIKRAYKRLASKHHPDK 36
>sp|B0BTI6|DNAJ_ACTPJ Chaperone protein DnaJ OS=Actinobacillus pleuropneumoniae serotype
3 (strain JL03) GN=dnaJ PE=3 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S ++++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLQKGASENDIKRAYKRLASKHHPDK 36
>sp|Q4ZNP8|DNAJ_PSEU2 Chaperone protein DnaJ OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=dnaJ PE=3 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S ++L++A+ L+++H PD+
Sbjct: 5 DYYEVLGVERGSSEADLKKAYRRLAMKHHPDR 36
>sp|Q48E63|DNAJ_PSE14 Chaperone protein DnaJ OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=dnaJ PE=3 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S ++L++A+ L+++H PD+
Sbjct: 5 DYYEVLGVERGSSEADLKKAYRRLAMKHHPDR 36
>sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sti1 PE=3 SV=1
Length = 591
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 256 AGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRIAESIADCNKTLALEPSC 315
+G ++ AI+ ++++ P+GF +RA AY AE I DCNK + L+P+
Sbjct: 412 SGDFANAIKEYTEMTKRAPSDPRGF-----GNRAAAYLKVMAPAECIRDCNKAIELDPNF 466
Query: 316 IQALDTRA----LLLETIRCLPDC 335
+A +A +L + +C+ C
Sbjct: 467 AKAYVRKAQALFMLKDYNKCIDAC 490
>sp|Q9CZW5|TOM70_MOUSE Mitochondrial import receptor subunit TOM70 OS=Mus musculus
GN=Tomm70a PE=1 SV=2
Length = 611
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 254 LDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRIAESIADCNKTLALEP 313
AG Y +AI+ +++ + L+ Y +RA A+ + E DC K + L P
Sbjct: 128 FKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNP 187
Query: 314 SCIQALDTRALLLETIRCLPDCLHDL 339
++AL RA E + +CL D+
Sbjct: 188 KYVKALFRRAKAHEKLDNKKECLEDV 213
>sp|Q87WP1|DNAJ_PSESM Chaperone protein DnaJ OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=dnaJ PE=3 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S ++L++A+ L+++H PD+
Sbjct: 5 DYYEVLGVERGSSEADLKKAYRRLAMKHHPDR 36
>sp|C3K274|DNAJ_PSEFS Chaperone protein DnaJ OS=Pseudomonas fluorescens (strain SBW25)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S ++L++A+ L+++H PD+
Sbjct: 5 DYYEVLGVERGSSEADLKKAYRRLAMKHHPDR 36
>sp|Q4QJW5|DNAJ_HAEI8 Chaperone protein DnaJ OS=Haemophilus influenzae (strain 86-028NP)
GN=dnaJ PE=3 SV=1
Length = 381
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S +++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLQKGASEDDIKRAYKRLASKHHPDK 36
>sp|B9E6X0|DNAJ_MACCJ Chaperone protein DnaJ OS=Macrococcus caseolyticus (strain
JCSC5402) GN=dnaJ PE=3 SV=1
Length = 372
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPD 427
DYY ++GL +G S+ E++RA+ LS ++ PD
Sbjct: 5 DYYEVLGLSKGASKEEIKRAYKKLSKKYHPD 35
>sp|P30725|DNAJ_CLOAB Chaperone protein DnaJ OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=dnaJ PE=2 SV=2
Length = 374
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 395 NVDYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
N DYY ++GL +G S E+++A L++++ PDK
Sbjct: 3 NKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDK 36
>sp|A4XYF5|DNAJ_PSEMY Chaperone protein DnaJ OS=Pseudomonas mendocina (strain ymp)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S +EL++A+ L++++ PD+
Sbjct: 5 DYYEVLGVERGASEAELKKAYRRLAMKYHPDR 36
>sp|Q9QYJ3|DNJB1_MOUSE DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2
SV=3
Length = 340
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY +GL RG S E++RA+ +LR+ PDK
Sbjct: 4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDK 35
>sp|P25685|DNJB1_HUMAN DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1
SV=4
Length = 340
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY +GL RG S E++RA+ +LR+ PDK
Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK 35
>sp|O52065|DNAJ_PASHA Chaperone protein DnaJ OS=Pasteurella haemolytica GN=dnaJ PE=3 SV=1
Length = 379
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL +G S +++RA+ L+ +H PDK
Sbjct: 5 DYYEVLGLSKGASEKDIKRAYKRLAAKHHPDK 36
>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3
Length = 340
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY +GL RG S E++RA+ +LR+ PDK
Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK 35
>sp|Q27968|DNJC3_BOVIN DnaJ homolog subfamily C member 3 OS=Bos taurus GN=DNAJC3 PE=1 SV=1
Length = 504
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 52/201 (25%)
Query: 239 HIKLLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRI 298
+K L + +A + G Y++AI + ++ G + + RS RI
Sbjct: 264 QVKKLNKLIESAEELIKEGRYTDAISKYESVMKTEPGVHE-----------YTIRSKERI 312
Query: 299 ----------AESIADCNKTLALEPSCIQALDTRA--LLLETIRCLPDCLHDLEHLKLLY 346
E+I C++ L +EP + AL RA L+E +Y
Sbjct: 313 CHCFSKDEKPVEAIRVCSEVLQVEPDNVNALKDRAEAYLIEE----------------MY 356
Query: 347 NAILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYALIGLRR 406
+ ++D + + HN ++I L +++ ++R DYY ++G++R
Sbjct: 357 DEAIQDYETA----QEHNENDQQIREGLEKAQRLLKQSQRR---------DYYKILGVKR 403
Query: 407 GCSRSELERAHLLLSLRHKPD 427
+ E+ +A+ L+L+ PD
Sbjct: 404 NAKKQEIIKAYRKLALQWHPD 424
>sp|A5FZ18|DNAJ_ACICJ Chaperone protein DnaJ OS=Acidiphilium cryptum (strain JF-5)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 396 VDYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY L+G+ RG S EL++A+ L++++ PD+
Sbjct: 4 TDYYELLGVSRGASADELKKAYRKLAMQYHPDR 36
>sp|P31948|STIP1_HUMAN Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1
Length = 543
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 176 EDAMVLLQTGKRLATAAFRRESISLSDDSFPFSKFPVSNNHQTPPATPPRTMTESESV-- 233
ED + + R+ + F+ E D+ F ++ H+TP + ++E +
Sbjct: 294 EDYRQIAKAYARIGNSYFKEEKYK---DAIHFYNKSLAE-HRTPDVL--KKCQQAEKILK 347
Query: 234 -SQLLSHIK--LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAF 290
+ L++I L L + G Y +A++H+++ + + P+ A+ Y +RA
Sbjct: 348 EQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI---KRNPKD--AKLYSNRAA 402
Query: 291 AYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIR 330
Y ++ DC + + LEP+ I+ +A LE ++
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 442
>sp|Q3ZBZ8|STIP1_BOVIN Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1
Length = 543
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 176 EDAMVLLQTGKRLATAAFRRESISLSDDSFPFSKFPVSNNHQTPPATPPRTMTESESV-- 233
ED + + R+ + F+ E D+ F ++ H+TP + ++E +
Sbjct: 294 EDYRQIAKAYARIGNSYFKEEKYK---DAIHFYNKSLAE-HRTPDVL--KKCQQAEKILK 347
Query: 234 -SQLLSHIK--LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAF 290
+ L++I L L + G Y +A++H+++ + + P+ A+ Y +RA
Sbjct: 348 EQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI---KRNPKD--AKLYSNRAA 402
Query: 291 AYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIR 330
Y ++ DC + + LEP+ I+ +A LE ++
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 442
>sp|Q91YW3|DNJC3_MOUSE DnaJ homolog subfamily C member 3 OS=Mus musculus GN=Dnajc3 PE=1
SV=1
Length = 504
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 31/130 (23%)
Query: 300 ESIADCNKTLALEPSCIQALDTRA--LLLETIRCLPDCLHDLEHLKLLYNAILRDRKLPG 357
E+I C++ L +EP + AL RA L+E +Y+ ++D +
Sbjct: 324 EAIRICSEVLQMEPDNVNALKDRAEAYLIEE----------------MYDEAIQDYE--- 364
Query: 358 PAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYALIGLRRGCSRSELERAH 417
A + HN ++I L +++ ++R DYY ++G++R + E+ +A+
Sbjct: 365 -AAQEHNENDQQIREGLEKAQRLLKQSQKR---------DYYKILGVKRNAKKQEIIKAY 414
Query: 418 LLLSLRHKPD 427
L+L+ PD
Sbjct: 415 RKLALQWHPD 424
>sp|Q60864|STIP1_MOUSE Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1
Length = 543
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 176 EDAMVLLQTGKRLATAAFRRESISLSDDSFPFSKFPVSNNHQTPPATPPRTMTESESV-- 233
ED + + R+ + F+ E D+ F ++ H+TP + ++E +
Sbjct: 294 EDYRQIAKAYARIGNSYFKEEKYK---DAIHFYNKSLAE-HRTPDVL--KKCQQAEKILK 347
Query: 234 -SQLLSHIK--LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAF 290
+ L++I L L + G Y +A++H+++ + + P+ A+ Y +RA
Sbjct: 348 EQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI---KRNPRD--AKLYSNRAA 402
Query: 291 AYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIR 330
Y ++ DC + + LEP+ I+ +A LE ++
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 442
>sp|P28616|DNAJ_BORBU Chaperone protein DnaJ OS=Borrelia burgdorferi (strain ATCC 35210 /
B31 / CIP 102532 / DSM 4680) GN=dnaJ PE=2 SV=2
Length = 364
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL +G S+ E+++A+ +++++ PD+
Sbjct: 4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDR 35
>sp|Q4R8N7|STIP1_MACFA Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1
PE=2 SV=1
Length = 543
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 176 EDAMVLLQTGKRLATAAFRRESISLSDDSFPFSKFPVSNNHQTPPATPPRTMTESESV-- 233
ED + + R+ + F+ E D+ F ++ H+TP + ++E +
Sbjct: 294 EDYRQIAKAYARIGNSYFKEEKYK---DAIHFYNKSLAE-HRTPDVL--KKCQQAEKILK 347
Query: 234 -SQLLSHIK--LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAF 290
+ L++I L L + G Y +A++H+++ + + P+ A+ Y +RA
Sbjct: 348 EQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI---KRNPKD--AKLYSNRAA 402
Query: 291 AYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIR 330
Y ++ DC + + LEP+ I+ +A LE ++
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 442
>sp|Q661A4|DNAJ_BORGA Chaperone protein DnaJ OS=Borrelia garinii (strain PBi) GN=dnaJ
PE=3 SV=1
Length = 364
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL +G S+ E+++A+ +++++ PD+
Sbjct: 4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDR 35
>sp|O54981|STIP1_CRIGR Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2
SV=1
Length = 543
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 176 EDAMVLLQTGKRLATAAFRRESISLSDDSFPFSKFPVSNNHQTPPATPPRTMTESESV-- 233
ED + + R+ + F+ E D+ F ++ H+TP + ++E +
Sbjct: 294 EDYRQIAKAYARIGNSYFKEERYK---DAIHFYNKSLAE-HRTPDVL--KKCQQAEKILK 347
Query: 234 -SQLLSHIK--LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAF 290
+ L++I L L + G Y +A++H+++ + + P+ A+ Y +RA
Sbjct: 348 EQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI---KRNPKD--AKLYSNRAA 402
Query: 291 AYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIR 330
Y ++ DC + + LEP+ I+ +A LE ++
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 442
>sp|O35814|STIP1_RAT Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1
SV=1
Length = 543
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 176 EDAMVLLQTGKRLATAAFRRESISLSDDSFPFSKFPVSNNHQTPPATPPRTMTESESV-- 233
ED + + R+ + F+ E D+ F ++ H+TP + ++E +
Sbjct: 294 EDYRQIAKAYARIGNSYFKEERYK---DAIHFYNKSLAE-HRTPDVL--KKCQQAEKILK 347
Query: 234 -SQLLSHIK--LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAF 290
+ L++I L L + G Y +A++H+++ + + P+ A+ Y +RA
Sbjct: 348 EQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAI---KRNPRD--AKLYSNRAA 402
Query: 291 AYRSSGRIAESIADCNKTLALEPSCIQALDTRALLLETIR 330
Y ++ DC + + LEP+ I+ +A LE ++
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 442
>sp|Q8NBP0|TTC13_HUMAN Tetratricopeptide repeat protein 13 OS=Homo sapiens GN=TTC13 PE=2
SV=3
Length = 860
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 250 AIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSG----RIAE-SIAD 304
A + +GLY EAIRHFS ++ + P L R AY G + AE ++ +
Sbjct: 150 AYVLIGSGLYDEAIRHFSTML---QEEPD--LVSAIYGRGIAYGKKGLHDIKNAELALFE 204
Query: 305 CNKTLALEPSCIQALDTRALLLETIRCLPDCLHDL 339
++ + LEP + + RA +L + + + ++DL
Sbjct: 205 LSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDL 239
>sp|Q80ZX8|SPAG1_MOUSE Sperm-associated antigen 1 OS=Mus musculus GN=Spag1 PE=1 SV=1
Length = 901
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 244 LRRRTAAIAALDAGLYSEAIRHFSKIV---DGRRGAPQGFLAECYMHRAFAYRSSGRIAE 300
L+RR + G ++EA +S + + A L+ Y +RA Y G +
Sbjct: 433 LKRRGNEL--FRGGQFAEAAAQYSVAIAQLEPTGSANADELSILYSNRAACYLKEGNCRD 490
Query: 301 SIADCNKTLALEPSCIQALDTRALLLETI 329
I DCN+ L L P ++ L RA+ ET+
Sbjct: 491 CIQDCNRALELHPFSVKPLLRRAMAYETL 519
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 242 LLLRRRTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYMHRAFAYRSSGRIAES 301
L R + A +G Y EA+ ++++ + P Y +RA A R + +
Sbjct: 212 LANREKGKGNEAFYSGDYEEAVMYYTRSLSA---LPTAI---AYNNRAQAEIKLQRWSSA 265
Query: 302 IADCNKTLALEPSCIQALDTRALLLETIRCLPDCLHDL 339
+ DC K L L+P ++AL RA + L + + DL
Sbjct: 266 LEDCEKALELDPGNVKALLRRATTYKHQNKLQEAVDDL 303
>sp|Q8XIT1|DNAJ_CLOPE Chaperone protein DnaJ OS=Clostridium perfringens (strain 13 / Type
A) GN=dnaJ PE=3 SV=1
Length = 387
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL++G S E++RA +++++ PD+
Sbjct: 5 DYYEVLGLQKGASDDEIKRAFRKMAMKYHPDR 36
>sp|A0Q1R3|DNAJ_CLONN Chaperone protein DnaJ OS=Clostridium novyi (strain NT) GN=dnaJ
PE=3 SV=1
Length = 376
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++GL +G S E+++A+ L++++ PD+
Sbjct: 5 DYYEVLGLSKGASDDEIKKAYRKLAMKYHPDR 36
>sp|C1DFM2|DNAJ_AZOVD Chaperone protein DnaJ OS=Azotobacter vinelandii (strain DJ / ATCC
BAA-1303) GN=dnaJ PE=3 SV=1
Length = 375
Score = 35.8 bits (81), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG +EL++A+ L++++ PD+
Sbjct: 5 DYYEVLGVERGAGEAELKKAYRRLAMKYHPDR 36
>sp|Q5H185|DNAJ_XANOR Chaperone protein DnaJ OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=dnaJ PE=3 SV=1
Length = 376
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S EL++A+ +++H PD+
Sbjct: 5 DYYEVLGVARGASDEELKKAYRRCAMKHHPDR 36
>sp|B2SQU3|DNAJ_XANOP Chaperone protein DnaJ OS=Xanthomonas oryzae pv. oryzae (strain
PXO99A) GN=dnaJ PE=3 SV=1
Length = 376
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S EL++A+ +++H PD+
Sbjct: 5 DYYEVLGVARGASDEELKKAYRRCAMKHHPDR 36
>sp|Q2P458|DNAJ_XANOM Chaperone protein DnaJ OS=Xanthomonas oryzae pv. oryzae (strain
MAFF 311018) GN=dnaJ PE=3 SV=1
Length = 376
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S EL++A+ +++H PD+
Sbjct: 5 DYYEVLGVARGASDEELKKAYRRCAMKHHPDR 36
>sp|B0KIS4|DNAJ_PSEPG Chaperone protein DnaJ OS=Pseudomonas putida (strain GB-1) GN=dnaJ
PE=3 SV=1
Length = 374
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 25/32 (78%)
Query: 397 DYYALIGLRRGCSRSELERAHLLLSLRHKPDK 428
DYY ++G+ RG S ++L++A+ L++++ PD+
Sbjct: 5 DYYEVLGVERGASEADLKKAYRRLAMKYHPDR 36
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,251,831
Number of Sequences: 539616
Number of extensions: 7483812
Number of successful extensions: 24412
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 24226
Number of HSP's gapped (non-prelim): 223
length of query: 580
length of database: 191,569,459
effective HSP length: 123
effective length of query: 457
effective length of database: 125,196,691
effective search space: 57214887787
effective search space used: 57214887787
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)