BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008040
(580 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255564836|ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus communis]
gi|223537362|gb|EEF38991.1| lysyl-tRNA synthetase, putative [Ricinus communis]
Length = 585
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/586 (82%), Positives = 529/586 (90%), Gaps = 8/586 (1%)
Query: 1 MEALKLWSTLSSLPISFRHVIRRRTSLT-----FVRCRS-STSITVSAGTRNRRASSSST 54
+EAL++W T SS + FRH +R T+ +RC S S+S RNRR+SSSS+
Sbjct: 2 VEALRVW-TFSSSIVPFRHFLRFTTTKRTFTSLLLRCSSNSSSAATKVAGRNRRSSSSSS 60
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
STSDREAVRA+R+KKVEELRSKGLEPYAYKW+RTH+ANQLQEIYR+LANGEE +E+D+V
Sbjct: 61 STSDREAVRAIRLKKVEELRSKGLEPYAYKWERTHTANQLQEIYRYLANGEELRNESDNV 120
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
S+AGR+VARRAFGKLAFLTLRDDSGTIQLYCEKERLL+D+F++LK VDIGDILG SGSM
Sbjct: 121 SIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLLNDEFEKLKTLVDIGDILGASGSM 180
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
KRTEKGELS+ VNSF ILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ PEVADVFRKRA
Sbjct: 181 KRTEKGELSICVNSFTILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRKRA 240
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KIVSEIRKTVES GF+EVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML
Sbjct: 241 KIVSEIRKTVESSGFLEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 300
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFEK+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDYQSMMN+ EEIVT CALAV+GK
Sbjct: 301 VGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNMAEEIVTRCALAVHGK 360
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
LTIDYQGV++CLERPWRRETMHNLVKEATGIDFNELGNDLKVAK+TTLR LG LE+KD+
Sbjct: 361 LTIDYQGVDVCLERPWRRETMHNLVKEATGIDFNELGNDLKVAKDTTLRNLGPVLEHKDR 420
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
+E SVGNLLNEVFEIVVEPKL+QPTFVLDYPIEISPLAKPHRRH GLTERFELFIC
Sbjct: 421 SSVEGCSSVGNLLNEVFEIVVEPKLLQPTFVLDYPIEISPLAKPHRRHVGLTERFELFIC 480
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE+ANAFSELTDP+DQR RLEEQVRQHNEKR + +SE +EK E +D SY VTLDD
Sbjct: 481 GRELANAFSELTDPMDQRGRLEEQVRQHNEKR-STISEAHKEEEKKDEQEDDSYSVTLDD 539
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
DF+TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LK+QQ
Sbjct: 540 DFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKVQQ 585
>gi|225435776|ref|XP_002285737.1| PREDICTED: lysyl-tRNA synthetase [Vitis vinifera]
gi|297746486|emb|CBI16542.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/592 (80%), Positives = 521/592 (88%), Gaps = 12/592 (2%)
Query: 1 MEALKLWSTLSSLPISFRHVIRRRTSLT----FVRCRSSTSITVS--------AGTRNRR 48
MEA K+WS S H+ T T V C S ++ T + AG R
Sbjct: 1 MEAWKVWSASSQPLKQLIHLASSTTRRTSSRFIVSCCSPSTTTATTAGGGSRIAGRNRRS 60
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
ASSSS+STSDR+A+RA+R+KKVEELR+KGLEPYAYKWDRTH+ANQLQ+IYRHL NGEE N
Sbjct: 61 ASSSSSSTSDRDAIRAIRLKKVEELRNKGLEPYAYKWDRTHTANQLQDIYRHLGNGEELN 120
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
SE+D+VS+AGR+VARRAFGKLAF TLRDDSGTIQLYCEKERLL++QF+QLK VDIGDIL
Sbjct: 121 SESDYVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCEKERLLNEQFEQLKTLVDIGDIL 180
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GVSGS+KRTEKGELSV VNSF +LTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ PEVAD
Sbjct: 181 GVSGSIKRTEKGELSVYVNSFAVLTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVAD 240
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
+FRKRAKIVS IR+TVES GFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL
Sbjct: 241 IFRKRAKIVSAIRRTVESSGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 300
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKRML+GGFEK+YE+GRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA
Sbjct: 301 HLKRMLVGGFEKVYEMGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTQCA 360
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
LAV GKLTIDYQG EICLERPWRRETM NLVKEATGIDFNEL ND+KVAKE LRALG G
Sbjct: 361 LAVCGKLTIDYQGTEICLERPWRRETMLNLVKEATGIDFNELDNDIKVAKEVALRALGIG 420
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
++KDK IE+ SVG++LNEVFEIVVEP+L+QPTFVLDYPIEISPLAKPHRRHAGLTER
Sbjct: 421 HDSKDKSSIEACTSVGHVLNEVFEIVVEPQLIQPTFVLDYPIEISPLAKPHRRHAGLTER 480
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFICGRE+ANAFSELTDP+DQR RLEEQVRQHNEKRAA VSE A+ K ES+D SY
Sbjct: 481 FELFICGRELANAFSELTDPMDQRGRLEEQVRQHNEKRAAVVSEPDHAEVKTTESEDESY 540
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
EVTLDDDF+TALEYGMPPASGMGLG+DRLVMLLTNSASIRDVIAFP+LK+QQ
Sbjct: 541 EVTLDDDFLTALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFPVLKVQQ 592
>gi|147798996|emb|CAN72569.1| hypothetical protein VITISV_036995 [Vitis vinifera]
Length = 601
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/601 (78%), Positives = 519/601 (86%), Gaps = 21/601 (3%)
Query: 1 MEALKLWSTLSSLPISFRHVIRRRTSLT----FVRCRSSTSITVS--------AGTRNRR 48
MEA K+WS S H+ T T V C S ++ T + AG R
Sbjct: 1 MEAWKVWSASSQPLKQLIHLASSTTRRTSSRFIVSCCSPSTTTATTAGGGSRIAGRNRRS 60
Query: 49 ASSSSTSTSDREAVRALRIK---------KVEELRSKGLEPYAYKWDRTHSANQLQEIYR 99
ASSSS+STSDR+A+RA+R+K +VEELR+KGLEPYAYKWDRTH+ANQLQ+IYR
Sbjct: 61 ASSSSSSTSDRDAIRAIRLKEGKVNILVLQVEELRNKGLEPYAYKWDRTHTANQLQDIYR 120
Query: 100 HLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLK 159
HL NGEE NSE+D+VS+AGR+VARRAFGKLAF TLRDDSGTIQLYCEKERLL++QF+QLK
Sbjct: 121 HLGNGEELNSESDYVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCEKERLLNEQFEQLK 180
Query: 160 VFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVD 219
VDIGDILGVSGS+KRTEKGELSV VNSF LTKSLLPLPDKYHGLTDVDKRYRQRYVD
Sbjct: 181 TLVDIGDILGVSGSIKRTEKGELSVYVNSFAXLTKSLLPLPDKYHGLTDVDKRYRQRYVD 240
Query: 220 MISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRD 279
MI+ PEVAD+FRKRAKIVS IR+TVES GFVEVETPVLQGAAGGAEARPFVTYHNSLGRD
Sbjct: 241 MIANPEVADIFRKRAKIVSAIRRTVESSGFVEVETPVLQGAAGGAEARPFVTYHNSLGRD 300
Query: 280 LYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNI 339
LYLRIATELHLKRML+GGFEK+YE+GRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+
Sbjct: 301 LYLRIATELHLKRMLVGGFEKVYEMGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNM 360
Query: 340 TEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKE 399
EEIVT CALAV GKLTIDYQG EICLERPWRRETM NLVKEATGIDFNEL D+KVAKE
Sbjct: 361 AEEIVTQCALAVCGKLTIDYQGTEICLERPWRRETMLNLVKEATGIDFNELXXDIKVAKE 420
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
LRALG G ++KDK IE+ SVG++LNEVFEIVVEP+L+QPTFVLDYPIEISPLAKPH
Sbjct: 421 VALRALGIGHDSKDKSSIEACTSVGHVLNEVFEIVVEPQLIQPTFVLDYPIEISPLAKPH 480
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
RRHAGLTERFELFICGRE+ANAFSELTDP+DQR RLEEQVRQHNEKRAA VSE A+ K
Sbjct: 481 RRHAGLTERFELFICGRELANAFSELTDPMDQRGRLEEQVRQHNEKRAAVVSEPDHAEVK 540
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
ES+D SYEVTLDDDF+TALEYGMPPASGMGLG+DRLVMLLTNSASIRDVIAFP+LK+Q
Sbjct: 541 TTESEDESYEVTLDDDFLTALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFPVLKVQ 600
Query: 580 Q 580
Q
Sbjct: 601 Q 601
>gi|449463846|ref|XP_004149642.1| PREDICTED: lysine--tRNA ligase-like [Cucumis sativus]
gi|449515797|ref|XP_004164934.1| PREDICTED: lysine--tRNA ligase-like [Cucumis sativus]
Length = 603
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/607 (74%), Positives = 512/607 (84%), Gaps = 31/607 (5%)
Query: 1 MEALKLWSTLSSLPISFRHVIRRRTSLTFVRCRSSTSITVSAGTRN-RRASSSSTSTS-- 57
MEA ++T+ + P F+H+ R +S + + S S TR RR SS++TST+
Sbjct: 1 MEASNPYATICAQPF-FKHLSRLASSTSTITALVPKS---SRSTRFLRRCSSAATSTAGD 56
Query: 58 ------------------------DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQ 93
DREAVRA+R+KKVEELRSKG EPYAY WDRTH+ANQ
Sbjct: 57 GKLKLSGRTRRSSSSTTSPPSSTSDREAVRAIRLKKVEELRSKGFEPYAYTWDRTHTANQ 116
Query: 94 LQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSD 153
LQE+Y+HL NGEESN++ D VSVAGR+VARRAFGKLAFLTLRDDSGTIQLYCEKERL++D
Sbjct: 117 LQELYKHLGNGEESNADTDCVSVAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLVND 176
Query: 154 QFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRY 213
QFDQLK VDIGDILGV GS+KRTEKGELSV VNSF ILTKSLLPLPDKYHGLTDVDKRY
Sbjct: 177 QFDQLKNLVDIGDILGVRGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDVDKRY 236
Query: 214 RQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYH 273
RQRY+DMI+ PEVAD FRKRAKI+SE+RKTVESLGFVEVETPVLQGAAGGAEARPFVTYH
Sbjct: 237 RQRYIDMIANPEVADTFRKRAKIISEVRKTVESLGFVEVETPVLQGAAGGAEARPFVTYH 296
Query: 274 NSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDY 333
NSLGRDLYLRIATELHLKRML+GGFEK+YEIGRIFRNEG+STRHNPEFT+IE+YEAYSDY
Sbjct: 297 NSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTSIEIYEAYSDY 356
Query: 334 QSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND 393
QSMMN+ E+IVT CALA++GKL++DYQG +IC ERPWRRETMHNLVKE TGID NE GND
Sbjct: 357 QSMMNMAEKIVTRCALAIHGKLSVDYQGTDICFERPWRRETMHNLVKETTGIDINEFGND 416
Query: 394 LKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEIS 453
LKVAKE TLR +GD L+ KD IE+S S+G+LL+E+FE+VVEPKL+QPTFVLDYPIEIS
Sbjct: 417 LKVAKEVTLRTIGDALDGKDTTSIEASQSIGHLLSEIFELVVEPKLIQPTFVLDYPIEIS 476
Query: 454 PLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEK 513
PLAKPHRRHAG TERFELFICGRE+ANAFSELTDP+DQR R EEQ+RQHNEK +AVS
Sbjct: 477 PLAKPHRRHAGFTERFELFICGRELANAFSELTDPIDQRGRFEEQMRQHNEKHGSAVSGT 536
Query: 514 SSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAF 573
S K+ +D SYEVTLDDDF+TALEYGMPPASG+G+GIDRLVMLLTNSASIRDVIAF
Sbjct: 537 DSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVIAF 596
Query: 574 PILKIQQ 580
P+LK QQ
Sbjct: 597 PVLKSQQ 603
>gi|356504551|ref|XP_003521059.1| PREDICTED: lysyl-tRNA synthetase-like [Glycine max]
Length = 584
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/588 (78%), Positives = 509/588 (86%), Gaps = 12/588 (2%)
Query: 1 MEALKL----WSTLSSLPISFRHVIRRRTSLTFVR-CRSSTSIT-VSAGTRNRRASSSST 54
MEALKL WS L S H RR + +R C SST+ A R RR+S SS+
Sbjct: 1 MEALKLCNLTWSPLKHFFHS--HAFRRTPPVLVLRACSSSTAAADTRAAGRGRRSSESSS 58
Query: 55 STS--DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
+TS DR+A+RA+R+KKVEELRSKGL+PYAY+W++TH ANQLQ+IYR L NGEE NSEND
Sbjct: 59 TTSTSDRDAIRAIRLKKVEELRSKGLDPYAYEWNKTHGANQLQDIYRDLGNGEEKNSEND 118
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
HVSVAGR+VARRAFGKLAFLTLRDDSGTIQLYC+KERL+ DQF+QLK VDIGDILGV G
Sbjct: 119 HVSVAGRIVARRAFGKLAFLTLRDDSGTIQLYCDKERLIGDQFEQLKAHVDIGDILGVRG 178
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V SF ILTKSLLPLPDKYHGLTD+DKRYRQRYVDMI+ PEVADVFR+
Sbjct: 179 TIKRTEKGELSVSVLSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRR 238
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK+VSEIR+T++SLGFVEVETPVLQGAAGGAEARPF+TYHNSLGRDLYLRIATELHLKR
Sbjct: 239 RAKVVSEIRRTMDSLGFVEVETPVLQGAAGGAEARPFITYHNSLGRDLYLRIATELHLKR 298
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
ML+GGFEK+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDYQSMMN+ EEIVT CALAV+
Sbjct: 299 MLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTRCALAVH 358
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
GKLTIDYQGVEICLE+PWRRETMHNLVKE GIDFNEL NDL+VAK TL LG L+NK
Sbjct: 359 GKLTIDYQGVEICLEKPWRRETMHNLVKETAGIDFNELANDLEVAKRVTLDTLGKNLDNK 418
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
DK IE+ SVG+LLNEVFE VEPKL+QPTFVLDYPIEISPLAKPHRR GLTERFELF
Sbjct: 419 DKGSIEACQSVGHLLNEVFESFVEPKLIQPTFVLDYPIEISPLAKPHRRSTGLTERFELF 478
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
ICGRE+ NAFSELTDP+DQR RLE+Q+RQH +KR AAVS +E E DD SYEVTL
Sbjct: 479 ICGRELGNAFSELTDPIDQRGRLEDQIRQHEKKR-AAVSTNDDKKEG-TEDDDDSYEVTL 536
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
DDDF+TALEYGMPPASGMGLGIDRLVMLLTNS SIRDVI FP+LK+QQ
Sbjct: 537 DDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIPFPVLKVQQ 584
>gi|297834174|ref|XP_002884969.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
lyrata]
gi|297330809|gb|EFH61228.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
lyrata]
Length = 603
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/523 (83%), Positives = 478/523 (91%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
DREA+R++R+KKVEELR +GLEPYAYKW++THSANQLQEIY+HLANGEES++E D VS+A
Sbjct: 81 DREAIRSIRLKKVEELRGQGLEPYAYKWEKTHSANQLQEIYKHLANGEESDNEIDRVSIA 140
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GRVVARRAFGKLAFLTLRDDSGTIQLYCEK RL DQF+QLK F+DIGDILG SGSMKRT
Sbjct: 141 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKGRLSDDQFEQLKQFIDIGDILGASGSMKRT 200
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EKGELS+ VNSF ILTKSLLPLPDKYHGLTD+DKRYRQRYVDMI+ PEVADVFR+RAKIV
Sbjct: 201 EKGELSICVNSFSILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRRRAKIV 260
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
SEIRKTVES G++EVETPVLQGAAGGAEARPFVT+HNSLGRDLYLRIATELHLKRML+GG
Sbjct: 261 SEIRKTVESFGYLEVETPVLQGAAGGAEARPFVTFHNSLGRDLYLRIATELHLKRMLVGG 320
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FEK+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDYQSMM++ E IVT C++AVNGKLTI
Sbjct: 321 FEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMDMAELIVTQCSMAVNGKLTI 380
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
DYQG EICLERPWRRETMHNLVKE TGI+F+ELG DL AK+T L AL D LE KDK I
Sbjct: 381 DYQGTEICLERPWRRETMHNLVKEITGINFSELGEDLGNAKDTVLLALQDVLEPKDKSGI 440
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ S+G+LLNEVFE+VVEPKLVQPTFVLDYP+EISPLAKPHR +A LTERFELFICGRE
Sbjct: 441 GACSSLGHLLNEVFEVVVEPKLVQPTFVLDYPVEISPLAKPHRSNAALTERFELFICGRE 500
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
MANAFSELTDP+DQR RLEEQVRQHN KRA A SE + K + DD SYEVTLD+DF+
Sbjct: 501 MANAFSELTDPVDQRTRLEEQVRQHNAKRAEAASEYAEPNAKKDDDDDESYEVTLDEDFL 560
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LK+QQ
Sbjct: 561 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKVQQ 603
>gi|15231261|ref|NP_187958.1| Lysyl-tRNA synthetase, class II [Arabidopsis thaliana]
gi|9280301|dbj|BAB01756.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
gi|26983796|gb|AAN86150.1| putative lysyl-tRNA synthetase [Arabidopsis thaliana]
gi|332641843|gb|AEE75364.1| Lysyl-tRNA synthetase, class II [Arabidopsis thaliana]
Length = 602
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/523 (83%), Positives = 478/523 (91%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
DREA+R++R+KKVEELR +GLEPYAYKW+++HSANQLQEIY+HLANGEES++E D VS+A
Sbjct: 80 DREAIRSIRLKKVEELRGQGLEPYAYKWEKSHSANQLQEIYKHLANGEESDNEIDCVSIA 139
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL DQF+QLK F+DIGDILG SGSMKRT
Sbjct: 140 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLSDDQFEQLKQFIDIGDILGASGSMKRT 199
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EKGELS+ VNSF ILTKSLLPLPDKYHGLTD+DKRYRQRYVDMI+ PEVADVFR+RAKIV
Sbjct: 200 EKGELSICVNSFSILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRRRAKIV 259
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
SEIRKTVES G++EVETPVLQGAAGGAEARPFVT+HNSLGRDLYLRIATELHLKRML+GG
Sbjct: 260 SEIRKTVESFGYLEVETPVLQGAAGGAEARPFVTFHNSLGRDLYLRIATELHLKRMLVGG 319
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FEK+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY SMM++ E IVT C++AVNGKLTI
Sbjct: 320 FEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYHSMMDMAELIVTQCSMAVNGKLTI 379
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
DYQG EICLERPWRRETMHNLVKE TGI+F+ELG DL AK+T L AL D LE KDK I
Sbjct: 380 DYQGTEICLERPWRRETMHNLVKEITGINFSELGEDLGNAKDTVLLALQDVLEPKDKSGI 439
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ S+G+LLNE+FE+VVEPKLVQPTFVLDYPIEISPLAKPHR +AGLTERFELFICGRE
Sbjct: 440 RACSSLGHLLNEIFEVVVEPKLVQPTFVLDYPIEISPLAKPHRGNAGLTERFELFICGRE 499
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
MANAFSELTDP+DQR RLEEQVRQHN KRA AV E K + DD SYEVTLD+DF+
Sbjct: 500 MANAFSELTDPVDQRTRLEEQVRQHNAKRAEAVRESPEPNAKKDDDDDESYEVTLDEDFL 559
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LK+QQ
Sbjct: 560 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKLQQ 602
>gi|242037499|ref|XP_002466144.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
gi|241919998|gb|EER93142.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
Length = 580
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/519 (74%), Positives = 445/519 (85%), Gaps = 5/519 (0%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA+R+KKVEELR+KG EPYAYKWDRTH+ +LQE Y HL NGE E+ VSVAGR+V
Sbjct: 67 IRAIRLKKVEELRAKGHEPYAYKWDRTHTTKELQEQYAHLVNGE--VCEDVSVSVAGRIV 124
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
ARRAFGKL F+T+RDDSGT+QLYCEK+ L DQF+QLK F+DIGDILG SGS+K+TEKGE
Sbjct: 125 ARRAFGKLVFMTVRDDSGTMQLYCEKDSLTEDQFEQLKAFIDIGDILGASGSIKKTEKGE 184
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V +F ILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ P+VADVFR RAK+VSEIR
Sbjct: 185 LSVYVKNFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPKVADVFRTRAKVVSEIR 244
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
KT+ES GF+EVETPVLQGAAGGAEARPF+TYHNSL RDLYLRIATELHLKRML+GG EK+
Sbjct: 245 KTMESFGFIEVETPVLQGAAGGAEARPFITYHNSLQRDLYLRIATELHLKRMLVGGLEKV 304
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA+A +GKL +DY+G
Sbjct: 305 YEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTRCAMATHGKLKVDYEG 364
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI LERPWRRETMH+LVKEATGIDFN G D++ AK G + N + +++
Sbjct: 365 TEISLERPWRRETMHSLVKEATGIDFNSFG-DVESAKRAVKGLPGFEVGNNESTSLQACS 423
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG++LNEVFE VE LVQPTFVLDYP+EISPLAKPHR H GLTERFELFICGRE+ NA
Sbjct: 424 SVGHVLNEVFETFVESTLVQPTFVLDYPVEISPLAKPHRSHVGLTERFELFICGREIGNA 483
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSELTDP+DQR+R E Q++QHN KRAA E S + DD+SYEV+LD+DF+T+LE
Sbjct: 484 FSELTDPIDQRSRFENQIKQHNVKRAAMAKEVKSTEG--DGDDDYSYEVSLDEDFLTSLE 541
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
YGMPPASGMGLGIDRLVMLLTNS+SIRDVIAFP+LKIQQ
Sbjct: 542 YGMPPASGMGLGIDRLVMLLTNSSSIRDVIAFPVLKIQQ 580
>gi|357150238|ref|XP_003575390.1| PREDICTED: lysyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 583
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/521 (74%), Positives = 444/521 (85%), Gaps = 4/521 (0%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E++RA+R+KKVEELR+KG EPYAYKWDRTH+ +LQE Y HL NGE VS+AGR
Sbjct: 67 ESIRAIRLKKVEELRAKGYEPYAYKWDRTHTTKELQERYAHLENGEVCTEAA--VSIAGR 124
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
+VARRAFGKL F+T+RDDSGTIQLYCEK+ L +QF+QLK +DIGDILG SGS+K+TEK
Sbjct: 125 IVARRAFGKLVFMTIRDDSGTIQLYCEKDSLTEEQFEQLKAVIDIGDILGASGSIKKTEK 184
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE+SV VN F ILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ PEVADVFR RAK+VSE
Sbjct: 185 GEISVYVNFFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKVVSE 244
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IRK +ES GF+EVETPVLQGAAGGAEARPF+T+HNSL RDLYLRIATELHLKRML+GG E
Sbjct: 245 IRKAMESFGFIEVETPVLQGAAGGAEARPFITHHNSLQRDLYLRIATELHLKRMLVGGLE 304
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA+A GKL +DY
Sbjct: 305 KVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATLGKLKVDY 364
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG EI LERPWRRE+MH LV+EATGIDFN G D++ AK LG D +++
Sbjct: 365 QGTEISLERPWRRESMHRLVEEATGIDFNSFG-DVESAKNAARELLGIKTSGSDSTSLQA 423
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG++LNEVFE VVE LVQPTFVLDYP+EISPLAKPHR AGLTERFELFICGRE+
Sbjct: 424 CSSVGHVLNEVFETVVESTLVQPTFVLDYPVEISPLAKPHRSCAGLTERFELFICGREIG 483
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSELTDP+DQR+R E Q++QHN KRAA + SA+ K + D++SYEV+LD+DF+T+
Sbjct: 484 NAFSELTDPIDQRSRFENQIKQHNTKRAAMEKKVKSAESK-GDDDEYSYEVSLDEDFLTS 542
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LKIQQ
Sbjct: 543 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ 583
>gi|326511347|dbj|BAJ87687.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/588 (68%), Positives = 477/588 (81%), Gaps = 14/588 (2%)
Query: 1 MEALKLWSTLSSLPISFRHVIRRRTSLT-------FVRCRS-STSITVSAGTRNRRASSS 52
MEAL++W S+L + F + + +RC S + + T RR S+S
Sbjct: 1 MEALRVWRASSNL-LGFAASRAAAAAASAGRAHRFHIRCCSPAAAATTKPPQDRRRRSAS 59
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
S+STSDR+++RA+R+KKVEELR G EPYAYKWDRTH+ +LQE Y HL +GE
Sbjct: 60 SSSTSDRDSIRAIRLKKVEELRGMGYEPYAYKWDRTHTTKELQERYTHLEDGEVCTEAA- 118
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
VS+AGR+VARRAFGKL F+T+RDDSGTIQLYCEKE L +QF+QLK F+D+ DILG SG
Sbjct: 119 -VSIAGRIVARRAFGKLVFMTIRDDSGTIQLYCEKESLTEEQFEQLKAFIDVDDILGASG 177
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
S+K+TEKGELSV VN F ILTKSLLPLPDKYHGLTDVDKRYRQRY+DMI+ PEVADVFR
Sbjct: 178 SIKKTEKGELSVYVNFFEILTKSLLPLPDKYHGLTDVDKRYRQRYIDMIANPEVADVFRT 237
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
R+K+VSEIRKT+ES GF+EVETPVLQGAAGGAEARPF+T+HNSL RDLYLRIATELHLKR
Sbjct: 238 RSKVVSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITHHNSLQRDLYLRIATELHLKR 297
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
ML+GG EK+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIV CA+A
Sbjct: 298 MLVGGLEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVIRCAMATT 357
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
GKL IDYQG EI LERPWRRETMH LV+EATG+DFN G D++ AK LG E+
Sbjct: 358 GKLKIDYQGTEISLERPWRRETMHRLVEEATGVDFNSFG-DVESAKNAAKGLLGFKTESS 416
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
+ +++ SVG++LNEVFE VVE LVQPTFVLDYP+EISPLAKPHRR+AGLTERFELF
Sbjct: 417 ENTSLQACSSVGHVLNEVFETVVESTLVQPTFVLDYPVEISPLAKPHRRYAGLTERFELF 476
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
+CGRE+ NAFSELTDP+DQR R E Q++QHN KRAA +K ++ K D++SYEV+L
Sbjct: 477 VCGREIGNAFSELTDPIDQRNRFENQIKQHNAKRAAM--DKKVKSDESKGDDEYSYEVSL 534
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
D+DF+T+LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LK+QQ
Sbjct: 535 DEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKLQQ 582
>gi|115447385|ref|NP_001047472.1| Os02g0623500 [Oryza sativa Japonica Group]
gi|48716234|dbj|BAD23770.1| putative lysyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|113537003|dbj|BAF09386.1| Os02g0623500 [Oryza sativa Japonica Group]
gi|215694818|dbj|BAG90009.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/519 (75%), Positives = 445/519 (85%), Gaps = 6/519 (1%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA+R+KKVEELR KG EPYAYKWDRTH+ +LQ+ Y HL NGE + VS+AGR+V
Sbjct: 74 IRAIRLKKVEELRGKGYEPYAYKWDRTHTTKELQDGYTHLENGE--VCADVAVSIAGRIV 131
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
ARRAFGKL F+T+RDDSGTIQLYCEK+ L +QF+QLK +DIGDI+G +GS+K+TEKGE
Sbjct: 132 ARRAFGKLVFMTVRDDSGTIQLYCEKDSLTEEQFEQLKTIIDIGDIIGANGSIKKTEKGE 191
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V +F ILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ PEVADVFR RAK VSEIR
Sbjct: 192 LSVYVKNFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKAVSEIR 251
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
KT+ES GF+EVETPVLQGAAGGAEARPF+T+HNSL RDLYLRIATELHLKRML+GG EK+
Sbjct: 252 KTMESFGFIEVETPVLQGAAGGAEARPFITHHNSLQRDLYLRIATELHLKRMLVGGLEKV 311
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA+A +GKL +DYQG
Sbjct: 312 YEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQG 371
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI LERPWRRETMH+LVKEATGIDFN G DL+ AK A G E+ + +++
Sbjct: 372 TEISLERPWRRETMHSLVKEATGIDFNSFGEDLESAKNA---ARGIKTESNENISLQACS 428
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG++LNEVFE VVE LVQPTFVLDYP+EISPLAKPHRR+AGLTERFELFICGRE+ NA
Sbjct: 429 SVGHVLNEVFETVVESSLVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFICGREIGNA 488
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSELTDP+DQR R E Q++QHN KRAA E S + K E DD SYEVTLD+DF+T+LE
Sbjct: 489 FSELTDPIDQRGRFENQIKQHNAKRAAMTKEVKSTEGK-HEEDDFSYEVTLDEDFLTSLE 547
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LKIQQ
Sbjct: 548 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ 586
>gi|222623269|gb|EEE57401.1| hypothetical protein OsJ_07579 [Oryza sativa Japonica Group]
Length = 665
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/598 (65%), Positives = 446/598 (74%), Gaps = 85/598 (14%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA+R+KKVEELR KG EPYAYKWDRTH+ +LQ+ Y HL NGE + VS+AGR+V
Sbjct: 74 IRAIRLKKVEELRGKGYEPYAYKWDRTHTTKELQDGYTHLENGE--VCADVAVSIAGRIV 131
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
ARRAFGKL F+T+RDDSGTIQLYCEK+ L +QF+QLK +DIGDI+G +GS+K+TEKGE
Sbjct: 132 ARRAFGKLVFMTVRDDSGTIQLYCEKDSLTEEQFEQLKTIIDIGDIIGANGSIKKTEKGE 191
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V +F ILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ PEVADVFR RAK VSEIR
Sbjct: 192 LSVYVKNFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKAVSEIR 251
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
KT+ES GF+EVETPVLQGAAGGAEARPF+T+HNSL RDLYLRIATELHLKRML+GG EK+
Sbjct: 252 KTMESFGFIEVETPVLQGAAGGAEARPFITHHNSLQRDLYLRIATELHLKRMLVGGLEKV 311
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ- 360
YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA+A +GKL +DYQ
Sbjct: 312 YEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQE 371
Query: 361 -------------GVE-------------------------------------------- 363
GVE
Sbjct: 372 YTVRSTQCEASRPGVEMESATAKAIGRKKGVKTPPVPWLVLTDAISYGHCQCQWLAMGTE 431
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LERPWRRETMH+LVKEATGIDFN G DL+ AK A G E+ + +++ SV
Sbjct: 432 ISLERPWRRETMHSLVKEATGIDFNSFGEDLESAKNA---ARGIKTESNENISLQACSSV 488
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNEVFE VVE LVQPTFVLDYP+EISPLAKPHRR+AGLTERFELFICGRE+ NAFS
Sbjct: 489 GHVLNEVFETVVESSLVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFICGREIGNAFS 548
Query: 484 ELTDPLDQ---------------------RARLEEQVRQHNEKRAAAVSEKSSAQEKLKE 522
ELTDP+DQ R R E Q++QHN KRAA E S + K E
Sbjct: 549 ELTDPIDQLVFGGFDKLEMQRPDLVNMQKRGRFENQIKQHNAKRAAMTKEVKSTEGK-HE 607
Query: 523 SDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
DD SYEVTLD+DF+T+LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LKIQQ
Sbjct: 608 EDDFSYEVTLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ 665
>gi|168058919|ref|XP_001781453.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667090|gb|EDQ53728.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 589
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/572 (62%), Positives = 446/572 (77%), Gaps = 17/572 (2%)
Query: 24 RTSLTFVRCRSSTSIT---------------VSAGTRNRRASSSSTSTSDREAVRALRIK 68
R+ L +RC +S+S VS G R R+ S+ STS RE +R LR+K
Sbjct: 19 RSLLHSIRCNASSSAPQTSEKPESKNSRNPRVSEGGR-RKKSAEVDSTSSREDIRTLRLK 77
Query: 69 KVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGK 128
KVE+LR+ G EPY Y WDRTH+A +LQ+ Y L + E+N E DHV+VAGR++ARR FGK
Sbjct: 78 KVEDLRAGGFEPYGYTWDRTHTAAELQKQYVDLPSATEANEEKDHVAVAGRIIARRVFGK 137
Query: 129 LAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNS 188
LAFLT+RDDSG IQLYCEK +L + FDQLK +DIGD +G G+MKRTEKGELSVLV
Sbjct: 138 LAFLTMRDDSGDIQLYCEKAKLTDEAFDQLKTLMDIGDFIGAKGTMKRTEKGELSVLVGE 197
Query: 189 FVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLG 248
ILTKSLLPLPDK+HGLTDV+KRYRQRYVDMI P+VA VFR RAKI+SEIR+ +ESLG
Sbjct: 198 LSILTKSLLPLPDKWHGLTDVEKRYRQRYVDMIMNPDVATVFRDRAKIISEIRRHMESLG 257
Query: 249 FVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIF 308
++E+ETPVLQG AGGA+ARPFVT+HN+LG+D+YLRIATELHLKRM++GGFE++YEIGRIF
Sbjct: 258 YLEIETPVLQGEAGGADARPFVTHHNALGQDMYLRIATELHLKRMVVGGFERVYEIGRIF 317
Query: 309 RNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLER 368
RNEG+STRHNPEFT+IE+Y+AY+DY MMN+ EEIV CAL VNG L++ YQG EI L+R
Sbjct: 318 RNEGISTRHNPEFTSIELYQAYADYDDMMNLAEEIVEKCALTVNGSLSLTYQGTEISLQR 377
Query: 369 PWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLN 428
PW+R +MH+LV+E TGI+F G+D++ AK + +E D I +PS+G+L+N
Sbjct: 378 PWKRASMHSLVEEVTGINFASFGDDIEAAKNAAVSFFAGHIERHDTGTILKAPSIGHLVN 437
Query: 429 EVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDP 488
EVFE+VVE L+QPTFV+D+P+EISPLAKPHR GL ERFELF+ GREMANAFSELTDP
Sbjct: 438 EVFEMVVEKTLIQPTFVMDHPVEISPLAKPHRSKPGLVERFELFVYGREMANAFSELTDP 497
Query: 489 LDQRARLEEQVRQHNEKRAAAVSEKSSAQE-KLKESDDHSYEVTLDDDFVTALEYGMPPA 547
++QR+R E QVR HN AAA + + L + + +YEV +D+DFVTALEYGMPP
Sbjct: 498 IEQRSRFEAQVRTHNAAMAAAAEAAKAKGDTALTSAINDAYEVGMDEDFVTALEYGMPPT 557
Query: 548 SGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+GMG+GIDRLVMLLT+SASIRDVIAFP++K Q
Sbjct: 558 AGMGIGIDRLVMLLTDSASIRDVIAFPVMKSQ 589
>gi|302799647|ref|XP_002981582.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
gi|300150748|gb|EFJ17397.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
Length = 507
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/509 (65%), Positives = 412/509 (80%), Gaps = 3/509 (0%)
Query: 73 LRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFL 132
+R G+EPYAY W+RTH A QLQE Y L G ++S+ D VSVAGR+ ARRAFGKLAFL
Sbjct: 1 MRGLGIEPYAYSWNRTHKATQLQEKYADLPAGGVADSDEDRVSVAGRIFARRAFGKLAFL 60
Query: 133 TLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVIL 192
+RDDS +IQLYC+K +L + F QLK VDIGDI+G +G++KRTEKGELSV V++ VIL
Sbjct: 61 GIRDDSASIQLYCDKAKL--ESFTQLKSTVDIGDIVGATGTLKRTEKGELSVYVDNLVIL 118
Query: 193 TKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEV 252
TKS+LPLP+K+HGLTD++KRYRQRY+DMI PEVA VFR RAK+VS IR+ VE LGF+E+
Sbjct: 119 TKSILPLPEKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSAIRRFVEDLGFLEI 178
Query: 253 ETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEG 312
ETP+LQGAAGGA+ARPF+T+HNSL RDL+LRIATELHLKRML+GGFE++YE+GRIFRNEG
Sbjct: 179 ETPILQGAAGGADARPFITHHNSLERDLFLRIATELHLKRMLVGGFERVYELGRIFRNEG 238
Query: 313 LSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRR 372
+STRHNPEFT+IE+Y+AY+DY MM + EE+VT CA A+ G + YQG EI LERPWRR
Sbjct: 239 ISTRHNPEFTSIEIYQAYADYNDMMALAEELVTKCAEAIFGNAKLLYQGTEIALERPWRR 298
Query: 373 ETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFE 432
+M +LV+EATGIDF+ G+DL AK L AL + + VI + +VGN+LNEVFE
Sbjct: 299 ASMQSLVQEATGIDFSAFGSDLSAAKSAALSALSPRKDESLQTVIANCATVGNVLNEVFE 358
Query: 433 IVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQR 492
VVE L+QPTFV ++P+E+SPLAK HR GL ERFEL+ICGRE+ANAFSELTDP++QR
Sbjct: 359 AVVEKTLIQPTFVTNHPVEVSPLAKAHRSFPGLVERFELYICGRELANAFSELTDPIEQR 418
Query: 493 ARLEEQVRQHNEK-RAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMG 551
AR E Q+R +N++ AA + + + +K+ + SYEVTLD+DF+TALEYGMPP +GMG
Sbjct: 419 ARFEAQIRAYNKQLEEAAAAARDRGESAVKQHKNDSYEVTLDEDFLTALEYGMPPTAGMG 478
Query: 552 LGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+GIDRLVMLLT+S SIRDVIAFP+LK QQ
Sbjct: 479 IGIDRLVMLLTDSPSIRDVIAFPVLKSQQ 507
>gi|302759575|ref|XP_002963210.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
gi|300168478|gb|EFJ35081.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
Length = 485
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/508 (63%), Positives = 399/508 (78%), Gaps = 23/508 (4%)
Query: 73 LRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFL 132
+R G+EPYAY W+RTH A QLQE Y L G ++S+ D VSVAGR+ ARRAFGKLAFL
Sbjct: 1 MRGLGIEPYAYSWNRTHKATQLQEKYADLPAGGVADSDEDRVSVAGRIFARRAFGKLAFL 60
Query: 133 TLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVIL 192
+RDDS +IQLYC+K +L + F QLK VDIGDI+G +G++KRTEKGELSV V++ VIL
Sbjct: 61 GIRDDSASIQLYCDKAKL--ESFTQLKSTVDIGDIVGATGTLKRTEKGELSVYVDNLVIL 118
Query: 193 TKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEV 252
TKS+LPLP+K+HGLTD++KRYRQRY+DMI PEVA VFR RAK+VS IR+ VE LGF+E+
Sbjct: 119 TKSILPLPEKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSVIRRFVEDLGFLEI 178
Query: 253 ETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEG 312
ETP+LQGAAGGA+ARPF+T+HNSL RDL+LRIATELHLKRML+GGFE++YE+GRIFRNEG
Sbjct: 179 ETPILQGAAGGADARPFITHHNSLERDLFLRIATELHLKRMLVGGFERVYELGRIFRNEG 238
Query: 313 LSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRR 372
+STRHNPEFT+IE+Y+AY+DY MM + EE+VT CA A+ G + YQG +I LERPW+R
Sbjct: 239 ISTRHNPEFTSIEIYQAYADYNDMMALAEELVTKCAEAIFGNAKLLYQGTDISLERPWKR 298
Query: 373 ETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFE 432
+M +LV+EATGIDF+ G+DL AK L AL + + VI + +VGN+LNEVFE
Sbjct: 299 ASMQSLVQEATGIDFSAFGSDLSAAKSAALSALSPRKDESLQTVIANCATVGNVLNEVFE 358
Query: 433 IVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQR 492
VVE L+QPTFV ++P+E+SPLAK HR GL ERFEL+ICGRE+ANAFSELTDP++Q
Sbjct: 359 AVVEKTLIQPTFVTNHPVEVSPLAKAHRSFPGLVERFELYICGRELANAFSELTDPIEQV 418
Query: 493 ARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGL 552
R E V+QH + SYEVTLD+DF+TALEYGMPP +GMG+
Sbjct: 419 HRGESAVKQHK---------------------NDSYEVTLDEDFLTALEYGMPPTAGMGI 457
Query: 553 GIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GIDRLVMLLT+S SIRDVIAFP+LK QQ
Sbjct: 458 GIDRLVMLLTDSPSIRDVIAFPVLKSQQ 485
>gi|22297756|ref|NP_681003.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|34222748|sp|Q8DMA9.1|SYK_THEEB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|22293933|dbj|BAC07765.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
Length = 506
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 316/520 (60%), Positives = 389/520 (74%), Gaps = 36/520 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA RI+K + L+++G+ PYAY+W+RTH+A LQ+ Y HLA GE + D VSVAGR++
Sbjct: 11 IRATRIEKAKTLQAQGMSPYAYRWERTHTAALLQDKYAHLAAGE---AVGDRVSVAGRIM 67
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ----FDQLKVFVDIGDILGVSGSMKRT 177
ARR FGKLAF TL+DDSGTIQLY +K+ + F LK D+GDILG G++KRT
Sbjct: 68 ARRIFGKLAFFTLQDDSGTIQLYLDKQTISQTMGEAAFADLKHLTDVGDILGAVGTLKRT 127
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EKGELSV+V S+ +LTKSLLPLPDK+HGLTDV+KRYRQRYVD+I P+V D FRKRA I
Sbjct: 128 EKGELSVVVESYTMLTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPQVRDTFRKRALIT 187
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+ IR+ + GF+E+ETPVLQ AGGAEARPF+TYHN+L LYLRIATELHLKR+++GG
Sbjct: 188 AAIRRYLNEQGFIEIETPVLQVEAGGAEARPFITYHNTLEMQLYLRIATELHLKRLIVGG 247
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FEK+YE+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+T A+ V G L I
Sbjct: 248 FEKVYELGRIFRNEGISTKHNPEFTSIEVYQAYADYNDMMTLTEAIITTGAMEVLGTLKI 307
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
YQG I L PWRR TMH+ V ATGIDF +LG DL AK + A G+++ D
Sbjct: 308 TYQGETIDLTPPWRRVTMHDAVLAATGIDFRQLG-DLTAAK---IAAQKVGVKDLD---- 359
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ ++G +LNEVFE +VEP L+QPTFVLDYP+EISPLAKPHR GL ERFELFI GRE
Sbjct: 360 -TCDTIGRVLNEVFEQIVEPTLIQPTFVLDYPVEISPLAKPHRSQPGLVERFELFIVGRE 418
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
AN+FSELTDPLDQR RLEEQ R+ AA HS +D+DF+
Sbjct: 419 HANSFSELTDPLDQRQRLEEQARRKAAGDLAA----------------HS----VDEDFL 458
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
TALE+GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 459 TALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 498
>gi|16330075|ref|NP_440803.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|383321818|ref|YP_005382671.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324987|ref|YP_005385840.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490871|ref|YP_005408547.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436138|ref|YP_005650862.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|451814234|ref|YP_007450686.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|2501021|sp|P73443.1|SYK_SYNY3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|1652562|dbj|BAA17483.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|339273170|dbj|BAK49657.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|359271137|dbj|BAL28656.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274307|dbj|BAL31825.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277477|dbj|BAL34994.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957973|dbj|BAM51213.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|451780203|gb|AGF51172.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
Length = 510
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 316/536 (58%), Positives = 396/536 (73%), Gaps = 38/536 (7%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ S S S E +RA R++K E+LR GL PYAY W+ TH A LQE YR L+NGEE + +
Sbjct: 2 ADSHSHSSLEEIRATRLEKAEQLRQLGLNPYAYTWEITHQAQDLQETYRDLSNGEEVDLK 61
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDI 164
V++AGR++ARR GKLAF TL+D+SGTIQLY EK+RL L + F+ LK D+
Sbjct: 62 ---VAIAGRILARRVMGKLAFFTLQDESGTIQLYLEKQRLTEHMPELENAFNLLKKITDV 118
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDILGV+G++KRTEKGELSV V ++ +LTKSLLPLPDK+HGLTD +KRYRQRYVD+I P
Sbjct: 119 GDILGVTGTLKRTEKGELSVYVQTYAVLTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNP 178
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
V FR+RA+I + IR+ ++ GF+E+ETPVLQG +GGAEARPF+T+HN+LG LYLRI
Sbjct: 179 TVRQTFRRRAQITAAIRRYLDKQGFIEIETPVLQGESGGAEARPFITHHNTLGMPLYLRI 238
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
ATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY DY MM +TE +V
Sbjct: 239 ATELHLKRLVVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYVDYNEMMALTEALV 298
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRA 404
T A AV G L I YQG EI L PW+R TMH V+ TGIDF++ DL+ AK+ +A
Sbjct: 299 TTAAQAVLGTLKITYQGEEIDLTPPWKRITMHEAVQLETGIDFSQF-TDLETAKQAATKA 357
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
G G V E PS+G+LLN FE VE L+QPTF++D+P+EISPLAKPHR G
Sbjct: 358 -GIG-------VPEDCPSLGHLLNHAFEQKVEGTLMQPTFIIDFPVEISPLAKPHRSKPG 409
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
L ERFELF+ GRE+AN+FSELTDP+DQR+RLE Q K+AA E S
Sbjct: 410 LVERFELFVYGRELANSFSELTDPIDQRSRLEAQA----AKKAAGDLEAHS--------- 456
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+D+DF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK Q+
Sbjct: 457 -------VDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKNQE 505
>gi|67920132|ref|ZP_00513652.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
gi|67857616|gb|EAM52855.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
Length = 573
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/531 (58%), Positives = 394/531 (74%), Gaps = 38/531 (7%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S+S+ + +RA R++KVE+L+ GL PYAY+W +H A LQ+ Y L NGEE + V
Sbjct: 12 SSSNLDEIRATRLEKVEQLKKIGLIPYAYQWKSSHDAASLQDKYASLKNGEEVEVD---V 68
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDIL 168
++AGR++ARR FGKLAF +L+D+SGTIQLY +K+ + L F+ LK D GDI+
Sbjct: 69 AIAGRIIARRVFGKLAFFSLQDESGTIQLYLDKKEIQAHMSELESAFNHLKKLTDTGDII 128
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV GS+KRTEKGELSV V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 129 GVKGSIKRTEKGELSVKVKEYEILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQ 188
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR+RA+I + IR+ +++ GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATEL
Sbjct: 189 TFRRRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFITYHNTLEMDLYLRIATEL 248
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+T A
Sbjct: 249 HLKRLIVGGFEKVFEMGRIFRNEGVSTKHNPEFTSIELYQAYADYNDMMELTEAIITTAA 308
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G L I YQG +I L PWRR TM+++VKE +G+DF E D + AK +A G
Sbjct: 309 EEVLGTLNITYQGEQIDLSTPWRRVTMNDIVKEKSGLDF-EAFTDFETAKTEVKKA---G 364
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
LE V E+ S+G LLNEVFE VE L+QPTF+LD+P+EISPLAKPHR GL ER
Sbjct: 365 LE-----VPETCQSLGKLLNEVFEQTVEESLIQPTFILDFPVEISPLAKPHRDKQGLVER 419
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FEL+I GRE+AN+FSELTDP+DQR RLE+Q E++AA E S
Sbjct: 420 FELYIVGRELANSFSELTDPIDQRERLEKQA----EQKAAGDLEAHS------------- 462
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 ---VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKNQ 510
>gi|416375147|ref|ZP_11683300.1| Lysyl-tRNA synthetase (class II) [Crocosphaera watsonii WH 0003]
gi|357266590|gb|EHJ15198.1| Lysyl-tRNA synthetase (class II) [Crocosphaera watsonii WH 0003]
Length = 573
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 310/531 (58%), Positives = 394/531 (74%), Gaps = 38/531 (7%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S+S+ + +RA R++KVE+L+ GL PYAY+W +H A LQ+ Y L NGEE + V
Sbjct: 12 SSSNLDEIRATRLEKVEQLKKIGLIPYAYQWKSSHDAASLQDKYASLKNGEEVEVD---V 68
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDIL 168
++AGR++ARR FGKLAF +L+D+SGTIQLY +K+ + L F+ LK D GDI+
Sbjct: 69 AIAGRIIARRVFGKLAFFSLQDESGTIQLYLDKKEIQAHMSELESAFNHLKKLTDTGDII 128
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV GS+KRTEKGELSV V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 129 GVKGSIKRTEKGELSVKVKEYEILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQ 188
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR+RA+I + IR+ +++ GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATEL
Sbjct: 189 TFRRRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFITYHNTLEMDLYLRIATEL 248
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+T A
Sbjct: 249 HLKRLIVGGFEKVFEMGRIFRNEGVSTKHNPEFTSIELYQAYADYNDMMELTEAIITTAA 308
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G L I YQG +I L PWRR TM+++VKE +G+DF E D + AK +A G
Sbjct: 309 EEVLGTLNITYQGEQIDLSTPWRRVTMNDIVKEKSGLDF-EAFIDFETAKTEVKKA---G 364
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
LE V E+ S+G LLNEVFE VE L+QPTF+LD+P+EISPLAKPHR GL ER
Sbjct: 365 LE-----VPETCQSLGKLLNEVFEQTVEESLIQPTFILDFPVEISPLAKPHRDKQGLVER 419
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FEL+I GRE+AN+FSELTDP+DQR RLE+Q E++AA E S
Sbjct: 420 FELYIVGRELANSFSELTDPIDQRERLEKQA----EQKAAGDLEAHS------------- 462
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 ---VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKNQ 510
>gi|218245720|ref|YP_002371091.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|218166198|gb|ACK64935.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
Length = 573
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 306/531 (57%), Positives = 395/531 (74%), Gaps = 38/531 (7%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S S E +RA R++KVE+L+ GL PYAYKW+ TH+A LQ+ Y L +GEE + E V
Sbjct: 12 SASSLEEIRATRLEKVEQLQQLGLVPYAYKWESTHTAANLQDKYATLKDGEEVDLE---V 68
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDIL 168
++AGR++ARR FGKLAF +L+D++GTIQLY +K+++ ++D F+ LK D GDIL
Sbjct: 69 AIAGRIIARRVFGKLAFFSLQDETGTIQLYLDKQQIDTSMTEVTDAFNTLKKLTDTGDIL 128
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G++KRTEKGELSV V ++ ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 129 GVVGTIKRTEKGELSVKVQTYTILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQ 188
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGAEARPF+TYHN+L +LYLRIATEL
Sbjct: 189 TFRRRAQITASIRRYLDENGFIEIETPVLQSEAGGAEARPFITYHNTLDMELYLRIATEL 248
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR++IGGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE ++T+ A
Sbjct: 249 HLKRLIIGGFEKVFELGRIFRNEGVSTKHNPEFTSIEVYQAYADYFDMMELTEALITNAA 308
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G L + YQ EI L PWRR TM ++VKE TG+DF+ D + AKE +A G
Sbjct: 309 QTVLGTLKLTYQETEIDLSTPWRRVTMTDIVKEKTGLDFDSF-TDFESAKEAAKKA---G 364
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
++ V + PS+G L+NE FE VE L+QPTF+LD+P+EISPLAKPHR GL ER
Sbjct: 365 ID-----VPDDCPSLGKLMNEAFEQKVEETLIQPTFILDFPVEISPLAKPHRSKKGLVER 419
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FEL+I GRE+AN+FSELTDP+DQR RLE+Q E++AA E
Sbjct: 420 FELYIVGRELANSFSELTDPIDQRERLEKQA----EQKAAGDLEAQG------------- 462
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK Q
Sbjct: 463 ---VDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKSQ 510
>gi|307153161|ref|YP_003888545.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306983389|gb|ADN15270.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 573
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 311/540 (57%), Positives = 391/540 (72%), Gaps = 38/540 (7%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE 105
+ ++ S S E +RA R++KVE+L+ GL PY YKW+ TH A QLQE Y L NGE
Sbjct: 3 SNQSQPQPQSGSSLEEIRATRLEKVEQLKQLGLNPYEYKWESTHHAAQLQEKYASLENGE 62
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLK 159
E + E V+VAGR++ARR FGKLAF L+D+SGTIQLY +K+R+ + + F+ +
Sbjct: 63 EVDLE---VAVAGRIIARRVFGKLAFFNLQDESGTIQLYLDKKRIGQTMADVPNAFNTVM 119
Query: 160 VFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVD 219
D GDILG G++KRTEKGELS+ VN + ILTKSLLPLPDK+HGLTD++KRYRQRYVD
Sbjct: 120 KLTDTGDILGAKGTIKRTEKGELSIYVNEYAILTKSLLPLPDKFHGLTDIEKRYRQRYVD 179
Query: 220 MISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRD 279
+I PEV + FR+RA+I + IR+ +E GF+E+ETPVLQ AGGA+ARPF+TYHN+L D
Sbjct: 180 LIINPEVRETFRRRAQITASIRRYLEGEGFLEIETPVLQSEAGGADARPFITYHNTLEMD 239
Query: 280 LYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNI 339
LYLRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +
Sbjct: 240 LYLRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNPEFTSIEIYQAYADYHDMMVL 299
Query: 340 TEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKE 399
TE I+T+ A G L + YQ EI L PWRR TMH LV+E TGIDFN+ + +E
Sbjct: 300 TENIITNAAKDALGTLKVTYQDQEIDLTPPWRRLTMHQLVEEKTGIDFNQ----FQTFEE 355
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
A G++ V E ++G LL E FE VE L++PTFVLD+P+EISPLAKPH
Sbjct: 356 GKKAAQKAGIQ-----VSEDCKTLGKLLYESFEQKVEESLIEPTFVLDFPVEISPLAKPH 410
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
R GL ERFEL+I GRE+AN+FSELTDP+DQR RLE Q EK+AA E S
Sbjct: 411 RNKPGLVERFELYIVGRELANSFSELTDPIDQRERLEAQA----EKKAAGDLEAHS---- 462
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK Q
Sbjct: 463 ------------VDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKSQ 510
>gi|257058766|ref|YP_003136654.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|256588932|gb|ACU99818.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 573
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 306/531 (57%), Positives = 392/531 (73%), Gaps = 38/531 (7%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S S E +RA R++KVE+L+ GL PYAYKW+ TH+A LQ+ Y L +GEE + E V
Sbjct: 12 SASSLEEIRATRLEKVEQLQQLGLVPYAYKWESTHTAANLQDKYATLKDGEEVDLE---V 68
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDIL 168
++AGR++ARR FGKLAF +L+D++ TIQLY +K+++ ++D F+ LK D GDIL
Sbjct: 69 AIAGRIIARRVFGKLAFFSLQDETATIQLYLDKQQIDTSMTEVTDAFNTLKKLTDTGDIL 128
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G++KRTEKGELSV V ++ ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 129 GVVGTIKRTEKGELSVKVQTYTILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQ 188
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGAEARPF+TYHN+L +LYLRIATEL
Sbjct: 189 TFRRRAQITASIRRYLDENGFIEIETPVLQSEAGGAEARPFITYHNTLDMELYLRIATEL 248
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR++IGGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE ++T+ A
Sbjct: 249 HLKRLIIGGFEKVFELGRIFRNEGVSTKHNPEFTSIEVYQAYADYFDMMELTEALITNAA 308
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
AV G L + YQ +EI L PWRR TM ++VKE TG+DF+ D + AKE +A D
Sbjct: 309 QAVLGTLKLTYQEIEIDLSTPWRRVTMTDIVKEKTGLDFDSF-TDFESAKEAAKKAGID- 366
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
V PS+G L+NE FE VE L+QPTF+LD+P+EISPLAKPHR GL ER
Sbjct: 367 -------VPNDCPSLGKLMNEAFEQKVEETLIQPTFILDFPVEISPLAKPHRSKKGLVER 419
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FEL+I GRE+AN+FSELTDP+DQR RLE+Q Q K S D
Sbjct: 420 FELYIVGRELANSFSELTDPIDQRERLEKQAEQ-------------------KASGDLEA 460
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+ +D+DF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK Q
Sbjct: 461 Q-GVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKSQ 510
>gi|428201155|ref|YP_007079744.1| lysyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
gi|427978587|gb|AFY76187.1| lysyl-tRNA synthetase (class II) [Pleurocapsa sp. PCC 7327]
Length = 574
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 312/542 (57%), Positives = 388/542 (71%), Gaps = 40/542 (7%)
Query: 42 AGTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHL 101
A + +R S ST D +RA R++KVE+L+ GL PYAYKW+ TH A +LQ+ Y L
Sbjct: 2 AMSSDRSQESQQHSTLDE--IRATRLEKVEQLKKLGLNPYAYKWETTHRAAELQDKYADL 59
Query: 102 ANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQF 155
NGEE E VSVAGR++ARR GK+AF L+D++GTIQLY +K+R+ + + F
Sbjct: 60 TNGEEVGVE---VSVAGRIMARRIMGKIAFFNLQDETGTIQLYLDKKRIQETMAEIPNAF 116
Query: 156 DQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQ 215
+ L D GDILG G++KRTEKGELSV V+ + ILTKSLLPLPDK+HGLTD +KRYRQ
Sbjct: 117 NTLIKLTDTGDILGTKGTIKRTEKGELSVYVSEYTILTKSLLPLPDKWHGLTDTEKRYRQ 176
Query: 216 RYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNS 275
RYVD+I PEV FR+RA+I + +R+ +E GF+E+ETPVLQ AGGAEARPF+TYHN+
Sbjct: 177 RYVDLIVNPEVRQTFRRRAQITASMRRYLEQQGFLEIETPVLQSEAGGAEARPFITYHNT 236
Query: 276 LGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQS 335
L DLYLRIATELHLKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT IE+Y+AY+DY +
Sbjct: 237 LDMDLYLRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTMIEVYQAYADYNN 296
Query: 336 MMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLK 395
MM +TE I+T+ A V G L I+YQG EI L PWRR TMH LV+E TG+DF K
Sbjct: 297 MMVLTENIITNVAQEVLGTLKINYQGQEIDLTTPWRRVTMHELVQEKTGVDF----ASFK 352
Query: 396 VAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPL 455
E A G+E + E S+G LLNE FE VE L+QPTFV+DYP+EISPL
Sbjct: 353 TLDEAKTAAKKAGIE-----IPEDCDSIGKLLNEAFEQKVEESLIQPTFVVDYPVEISPL 407
Query: 456 AKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSS 515
AKPHR GL ERFELFI GRE AN+FSELTDP+DQR RLE Q +
Sbjct: 408 AKPHRSKPGLVERFELFIVGRETANSFSELTDPIDQRERLEAQ----------------A 451
Query: 516 AQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPI 575
AQ+ + + H +D+DF+ ALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+
Sbjct: 452 AQKAAGDLEAHG----VDEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPL 507
Query: 576 LK 577
LK
Sbjct: 508 LK 509
>gi|126658229|ref|ZP_01729379.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126620378|gb|EAZ91097.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 573
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/531 (57%), Positives = 390/531 (73%), Gaps = 38/531 (7%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S S + +RA R++KVE+L+ GL PYAY+W TH A LQ+ Y L +GEE + + +
Sbjct: 12 SASSLDEIRATRLEKVEKLKQLGLIPYAYQWQSTHDATTLQDKYASLKDGEEVDVD---I 68
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDIL 168
++AGR++ARR FGKLAF L+D++GTIQLY +K+ + L + F+ LK D GDI+
Sbjct: 69 AIAGRIIARRVFGKLAFFNLQDETGTIQLYLDKKEIQSHMSELENAFNHLKKLTDTGDII 128
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV GS+KRTEKGELSV V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 129 GVKGSIKRTEKGELSVKVKQYQILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQ 188
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR RA+I + IR+ +++ GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATEL
Sbjct: 189 TFRHRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFITYHNTLEMDLYLRIATEL 248
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+T A
Sbjct: 249 HLKRLIVGGFEKVFEMGRIFRNEGVSTKHNPEFTSIEIYQAYADYNDMMELTEAIITTAA 308
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G I YQG +I + PWRR TMH +VKE +G+DF + D + AK D
Sbjct: 309 QEVLGDSKITYQGEKIDISTPWRRVTMHEIVKEKSGLDFEKF-KDFESAK--------DA 359
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
++N + V E+ S+G LLNEVFE VE L+QPTF+LD+P+EISPLAKPHR GL ER
Sbjct: 360 VKNAELEVPETCQSLGKLLNEVFEQTVEETLIQPTFILDFPVEISPLAKPHRSKQGLVER 419
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FEL+I GRE+AN+FSELTDP+DQR RLE+Q E++AA E S
Sbjct: 420 FELYIVGRELANSFSELTDPIDQRNRLEKQA----EQKAAGDLEAHS------------- 462
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 ---VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|218437352|ref|YP_002375681.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
gi|218170080|gb|ACK68813.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
Length = 573
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 309/540 (57%), Positives = 390/540 (72%), Gaps = 38/540 (7%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE 105
+ ++ S S E +RA R++KVE+L+ GL PY YKW+ TH A +LQE Y L NGE
Sbjct: 3 SNQSQPQPQSGSSLEEIRATRLEKVEQLKQLGLNPYEYKWESTHHAAELQEKYADLENGE 62
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLK 159
E + E VS+AGR++ARR FGKLAF L+D++GTIQLY EK+R+ +++ F+ +
Sbjct: 63 EIDLE---VSIAGRIIARRVFGKLAFFNLQDETGTIQLYLEKKRISQTMADVANAFNTVL 119
Query: 160 VFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVD 219
D GDILG G++KRTEKGELS+ V + ILTK+LLPLPDK+HGLTD++KRYRQRYVD
Sbjct: 120 KLTDTGDILGAKGTIKRTEKGELSIYVTEYAILTKTLLPLPDKFHGLTDIEKRYRQRYVD 179
Query: 220 MISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRD 279
+I PEV + FR+RA+I + IR+ +E GF+E+ETPVLQ AGGA+ARPF+TYHN+L D
Sbjct: 180 LIINPEVRETFRRRAQITASIRRYLEQEGFLEIETPVLQSEAGGADARPFITYHNTLEMD 239
Query: 280 LYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNI 339
LYLRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +
Sbjct: 240 LYLRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNPEFTSIEIYQAYADYHDMMVL 299
Query: 340 TEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKE 399
TE I+T A V G L I YQ EI L PWRR TMH LV+E TG+D N+ K +E
Sbjct: 300 TENIITTAAKDVVGTLKITYQEEEIDLTPPWRRVTMHELVEEKTGLDLNK----FKTFEE 355
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
A G++ V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPH
Sbjct: 356 ARTAAKKAGID-----VPEDCKTLGKLLNEAFEQKVEESLIQPTFVLDFPVEISPLAKPH 410
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
R +GL ERFEL+I GRE+AN+FSELTDP+DQR RLE Q EK+AA E
Sbjct: 411 RSKSGLVERFELYIVGRELANSFSELTDPIDQRKRLEAQA----EKKAAGDLEAHG---- 462
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLTNS SIRDVIAFP+LK Q
Sbjct: 463 ------------VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVIAFPLLKSQ 510
>gi|443329038|ref|ZP_21057629.1| lysyl-tRNA synthetase (class II) [Xenococcus sp. PCC 7305]
gi|442791404|gb|ELS00900.1| lysyl-tRNA synthetase (class II) [Xenococcus sp. PCC 7305]
Length = 576
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 310/538 (57%), Positives = 394/538 (73%), Gaps = 37/538 (6%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
++ + + S+ E +RA RI+K+ +++ GL PYAYKW +H A +LQE Y LA+GEE+
Sbjct: 5 QSPDNQPNKSNLEEIRATRIEKIGQIKELGLNPYAYKWAISHHAQELQEKYLDLASGEEA 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSD---QFDQLKVF 161
D VS+AGR++ARR FGKLAF L+D++G IQLY EK+++ +SD F+ LK
Sbjct: 65 --AEDIVSIAGRIIARRVFGKLAFFELQDETGKIQLYLEKKKINQQMSDVVGAFNHLKKL 122
Query: 162 VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI 221
D GDILGV GS+KRTEKGELS+ V+ + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I
Sbjct: 123 SDTGDILGVKGSLKRTEKGELSIYVSEYAILTKSLLPLPDKWHGLTDTEKRYRQRYVDLI 182
Query: 222 SKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLY 281
P+V FR RA+I + IR+ +E+ F+E+ETPVLQG AGGAEARPFVTYHN+L DLY
Sbjct: 183 VNPQVRQTFRYRAQITAGIRRYLETRDFLEIETPVLQGEAGGAEARPFVTYHNTLEMDLY 242
Query: 282 LRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITE 341
LRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY+ MM +TE
Sbjct: 243 LRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYEDMMALTE 302
Query: 342 EIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETT 401
+++ A V G+ ++YQG EI L PWRR TMH +V+E TG+DF + +D + AK
Sbjct: 303 NLISTVAQEVVGQTKVNYQGTEIDLTPPWRRVTMHEIVEETTGVDFAQF-DDFESAKVAA 361
Query: 402 LRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
A G+E V ++G LLNE FE VE L+QPTF++DYP+EISPLAKPHR
Sbjct: 362 QEA---GIEVPGDCV-----TIGKLLNEAFEQKVEENLIQPTFIIDYPLEISPLAKPHRS 413
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
GL ERFELFI GRE AN+FSELTDPLDQRARLE Q K+AA E +
Sbjct: 414 KPGLVERFELFIVGRETANSFSELTDPLDQRARLEAQA----AKKAAGDVEAND------ 463
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK Q
Sbjct: 464 ----------VDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKSQ 511
>gi|172038375|ref|YP_001804876.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|354554278|ref|ZP_08973583.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
gi|171699829|gb|ACB52810.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|353553957|gb|EHC23348.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
Length = 573
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 306/529 (57%), Positives = 388/529 (73%), Gaps = 38/529 (7%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S S E +RA R++KVE+L+ GL PYAY+W TH A LQ+ Y +L +GEE + V
Sbjct: 12 SASSLEEIRATRLEKVEQLKQLGLIPYAYQWQSTHDAATLQDKYTNLKDGEEVAVD---V 68
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDIL 168
++AGR++ARR FGKLAF L+D++GTIQLY +K+ + L F+ LK D GDI+
Sbjct: 69 AIAGRIIARRVFGKLAFFNLQDETGTIQLYLDKKEIQAHMSDLDSAFNHLKKLTDTGDII 128
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV GS+KRTEKGELSV V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 129 GVKGSIKRTEKGELSVKVKQYQILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQ 188
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATEL
Sbjct: 189 TFRRRAEITASIRRYLDKQGFIEIETPVLQSEAGGAEARPFITYHNTLEMDLYLRIATEL 248
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+T A
Sbjct: 249 HLKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEVYQAYADYNDMMELTEAIITTAA 308
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G L I YQG +I L PWRR TMH++VKE +G+DF + D + AK G
Sbjct: 309 EEVLGTLKITYQGEDIDLSTPWRRVTMHDIVKEKSGLDFEQF-KDFETAKNAVKEV---G 364
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
L+ V E+ S+G L+NEVFE VE L+QPTF+LD+P+EISPLAKPHR GL ER
Sbjct: 365 LD-----VPETCQSLGKLINEVFEQTVEETLIQPTFILDFPVEISPLAKPHRNKEGLVER 419
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FEL+I GRE+AN+FSELTDP+DQR RLE+Q E++AA E S
Sbjct: 420 FELYIVGRELANSFSELTDPIDQRNRLEKQA----EQKAAGDLEAHS------------- 462
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK
Sbjct: 463 ---VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLK 508
>gi|427731599|ref|YP_007077836.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7524]
gi|427367518|gb|AFY50239.1| lysyl-tRNA synthetase (class II) [Nostoc sp. PCC 7524]
Length = 508
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 312/525 (59%), Positives = 381/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLPSGEEVELE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL D++GTIQLY EK R+ +D F+ LK D+GDILGV+G
Sbjct: 61 IMARRVFGKLAFFTLEDETGTIQLYLEKNRIQENMAEVDADAFNHLKQLTDVGDILGVTG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEIYQAYADYNDMMALTEGIITTVAQEVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH+LVKE+TG+DFN L AK + A GL
Sbjct: 301 GTLQITYQGETVDLTPPWRRVTMHDLVKESTGLDFNSFPT-LAEAKAASKNA---GLTG- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
IE S+G LLNE FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----IEDVTSIGKLLNEAFEQKVETNLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLE Q ++AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRERLEAQA----ARKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>gi|354568638|ref|ZP_08987801.1| Lysyl-tRNA synthetase [Fischerella sp. JSC-11]
gi|353539892|gb|EHC09372.1| Lysyl-tRNA synthetase [Fischerella sp. JSC-11]
Length = 508
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 310/525 (59%), Positives = 378/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +R R++KVE+LR G+ PYAY+W+ TH A QLQE + LANGEE + + V++AGR
Sbjct: 4 EEIRTTRLEKVEQLRQLGMNPYAYRWESTHYAAQLQEKFADLANGEEVDID---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR GKLAF +L+D++G IQLY EK R+ +D F+ LK D+GDILG G
Sbjct: 61 IMARRVMGKLAFFSLQDETGKIQLYLEKNRIQEGMADIDADAFNHLKQLTDVGDILGARG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEERDFLEIETPVLQTEAGGADARPFITYHNTLDMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM +TE I+T
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEIYQAYADYNDMMALTEGIITTVTQETL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH LV+E TG+DFN L+ AK A GLE
Sbjct: 301 GTLQITYQGQAVDLTPPWRRVTMHGLVQEYTGLDFNSF-QTLEEAKTACKNA---GLEG- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
IE PS+G LLNE FE VE LVQPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----IEDCPSIGKLLNEAFEQKVETNLVQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLEEQ ++AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRQRLEEQA----ARKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+ ASIRD IAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDCASIRDAIAFPLLK 496
>gi|186685281|ref|YP_001868477.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
gi|238689252|sp|B2J384.1|SYK_NOSP7 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|186467733|gb|ACC83534.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 561
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 310/525 (59%), Positives = 382/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + LA+GEE + E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEQFADLASGEEVDLE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL+D++GTIQLY +K R+ +D F+ LK D GDILGV G
Sbjct: 61 IMARRVFGKLAFFTLQDETGTIQLYLDKNRIQESMADIDADAFNHLKQLTDAGDILGVKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPF+T+HN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITHHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEVYQAYADYNDMMALTEGIITTVAQEVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG I L PWRR TMH+LVKE TG+DFN L+ AK + A G
Sbjct: 301 GTLQITYQGEPIDLTPPWRRVTMHDLVKEFTGLDFNSF-QTLEEAKTASKNAGIPG---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++ + S+G LLN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----VDEAKSIGKLLNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE N+FSELTDP+DQR RLE Q E++AA E +
Sbjct: 412 IVGRETGNSFSELTDPIDQRERLEAQA----ERKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>gi|427734952|ref|YP_007054496.1| lysyl-tRNA synthetase [Rivularia sp. PCC 7116]
gi|427369993|gb|AFY53949.1| lysyl-tRNA synthetase (class II) [Rivularia sp. PCC 7116]
Length = 508
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 304/525 (57%), Positives = 382/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+LR +G+ PYAY+W+ TH A +LQE + +ANGEE + E V++AGR
Sbjct: 4 EDIRATRLEKVEQLRQQGMNPYAYRWEVTHHAGELQEKFADIANGEEVDFE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ RR GKLAF TL+D++GTIQLY EK+R+ +D F LK D+GDILG G
Sbjct: 61 IMTRRVMGKLAFFTLQDETGTIQLYLEKKRISESMADIDADAFKNLKQLTDMGDILGAKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + +LTKSLLPLPDK+HGLTD+ KRYRQRYVD+I P+V FR+
Sbjct: 121 TIKRTEKGELSVYVKQYSVLTKSLLPLPDKWHGLTDITKRYRQRYVDLIVNPDVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA I + IR+ ++ GF+E+ETPV+QG AGGA+ARPF+TYHN+L LYLRIATELHLKR
Sbjct: 181 RALITAGIRRYLDERGFIEIETPVMQGEAGGADARPFITYHNTLEMQLYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM++TE I+T + V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTTIELYQAYADYNDMMDLTEGIITTVSQEVI 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQG E+ L PWRR TMH LVKE +GIDF + AK A G+E
Sbjct: 301 GTLKINYQGTEVDLTPPWRRVTMHELVKEYSGIDFESF-QSFEQAKAACKNA---GIEG- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
I+ PS+G LLNE FE VE LVQPTFV D+P+EISPLAKPHR GL ERFEL+
Sbjct: 356 ----IDDCPSLGKLLNEAFEQKVEENLVQPTFVTDFPVEISPLAKPHRSKPGLVERFELY 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
+ GRE AN+FSELTDP+DQR RLEEQ ++AA E +
Sbjct: 412 MVGRETANSFSELTDPIDQRQRLEEQA----ARKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 452 DEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 496
>gi|428777262|ref|YP_007169049.1| lysyl-tRNA synthetase [Halothece sp. PCC 7418]
gi|428691541|gb|AFZ44835.1| lysyl-tRNA synthetase [Halothece sp. PCC 7418]
Length = 519
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 310/534 (58%), Positives = 390/534 (73%), Gaps = 38/534 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS 109
+++ S S + +RA RI+KVE L+ +GL P+AY+W+ TH A +LQ+ Y L NGEE +
Sbjct: 7 NNNQQSASSLKDIRATRIQKVETLKEEGLNPFAYQWEVTHHAGELQQQYVDLENGEEVEN 66
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVD 163
+ VS+AGR++ARR FGKLAF TL+D++GTIQLY +K+R+ L + F+ LK D
Sbjct: 67 K---VSIAGRIIARRVFGKLAFFTLQDETGTIQLYLDKKRITAGMPNLENAFNLLKKQTD 123
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
GD LGV G++KRTEKGELSV V+ + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I
Sbjct: 124 AGDFLGVKGTLKRTEKGELSVNVSEYEILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVN 183
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
P V + FRKRAKI++ IR+ +E+ F+E+ETPVLQ AGGA+ARPFVTYHN+L DLYLR
Sbjct: 184 PNVRETFRKRAKIIAAIRRYLEADDFLEIETPVLQSEAGGADARPFVTYHNTLEMDLYLR 243
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IATELHLKR+++GGFE+++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I
Sbjct: 244 IATELHLKRLIVGGFERVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYYDMMTLTENI 303
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR 403
+T A V G L + YQG I L PW+R TMH LV+E TG+D N+ +D + AK+
Sbjct: 304 ITCAANEVLGSLILYYQGETIDLNSPWKRATMHELVEEKTGVDLNQF-SDFESAKKAATE 362
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
A D V E S+G LLNE FE VE L+QPTFVLD+P EISPLAKPHR
Sbjct: 363 AGID--------VPEECQSLGKLLNEAFEQKVEETLIQPTFVLDFPKEISPLAKPHRSQE 414
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
GL ERFELF+ GREMAN+FSELTDP+DQR RLE Q K+AA E +
Sbjct: 415 GLVERFELFVAGREMANSFSELTDPIDQRERLELQA----AKKAAGDLEAHN-------- 462
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 463 --------VDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 508
>gi|158338556|ref|YP_001519733.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|158308797|gb|ABW30414.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 517
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 299/537 (55%), Positives = 393/537 (73%), Gaps = 39/537 (7%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
RAS S S E VRA R++KVE+L+ GL PYAY+W TH+A LQE + LANGEE
Sbjct: 5 RASESPNQGSTLEEVRATRLQKVEQLKQAGLTPYAYRWQSTHTAQALQEKFVDLANGEEE 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSDQ----FDQLKV 160
+ E V++AGR++ARR FGKLAF L+D++GTIQLY EK+R+ + +Q F+ LK
Sbjct: 65 DFE---VAIAGRILARRVFGKLAFFNLQDETGTIQLYLEKKRIQEQMGEQDEQAFNHLKQ 121
Query: 161 FVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDM 220
D+GD +GV G++KRT+KGELSV V ++ +LTKSLLPLPDK+HGLTD+ KRYRQRYVD+
Sbjct: 122 LTDVGDFIGVQGTIKRTDKGELSVYVQTYTVLTKSLLPLPDKWHGLTDIAKRYRQRYVDL 181
Query: 221 ISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDL 280
I P V + FR+RA+I + IR+ ++ GF+E+ETPVL AGGAEARPF+TYHN++ DL
Sbjct: 182 IVNPSVRETFRRRAQITASIRRYLDEQGFIEIETPVLNSEAGGAEARPFITYHNTMEMDL 241
Query: 281 YLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNIT 340
YLRIATELHLKR+++GGFEK++E+GR+FRNEG+STRHNPEFTTIE+Y+AY+DY MM++T
Sbjct: 242 YLRIATELHLKRLIVGGFEKVFELGRVFRNEGISTRHNPEFTTIEVYQAYADYNDMMDLT 301
Query: 341 EEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKET 400
E ++ A G L + YQG I L PWRR TMH+ V+E TG+DF ++ A++
Sbjct: 302 EALICTAAERSVGSLKVPYQGETIDLTSPWRRVTMHDAVQEKTGLDFTTF-ETVEAAQKA 360
Query: 401 TLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHR 460
+A G+++ + SVG++LNE FE VE L+QPTF+LDYP+EISPLAKPHR
Sbjct: 361 ATKAGITGVDDCE--------SVGHVLNEAFEQKVEATLIQPTFILDYPVEISPLAKPHR 412
Query: 461 RHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKL 520
+GL ERFELFI GRE AN+FSELTDP+DQR RLE Q +A+++
Sbjct: 413 SQSGLVERFELFIVGRETANSFSELTDPVDQRQRLEAQ----------------AARKEA 456
Query: 521 KESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ + H +D+DF+TALEYGMPP G+G+GIDRL MLL+++ASIRDVIAFP+LK
Sbjct: 457 GDLEAHG----VDEDFITALEYGMPPTGGLGIGIDRLAMLLSDAASIRDVIAFPLLK 509
>gi|434398801|ref|YP_007132805.1| lysyl-tRNA synthetase, class II [Stanieria cyanosphaera PCC 7437]
gi|428269898|gb|AFZ35839.1| lysyl-tRNA synthetase, class II [Stanieria cyanosphaera PCC 7437]
Length = 573
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 312/540 (57%), Positives = 391/540 (72%), Gaps = 38/540 (7%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE 105
+ ++ + +S E +RA RI+KVEEL+ GL PYAYKW+ T A +LQE YR LA+GE
Sbjct: 3 DNQSPNKQQPSSTLEEIRANRIEKVEELKQLGLNPYAYKWEITDHAAELQEKYRDLADGE 62
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLK 159
E V++AGR+VARR FGKLAF ++D++G IQLY +K+++ L F+ LK
Sbjct: 63 EIEE---EVAIAGRIVARRVFGKLAFFEIQDETGKIQLYLDKKKINQKMSDLEGAFNHLK 119
Query: 160 VFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVD 219
D GDILGV G++KRTEKGELSV V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD
Sbjct: 120 KLTDTGDILGVKGTIKRTEKGELSVYVGEYAILTKSLLPLPDKWHGLTDTEKRYRQRYVD 179
Query: 220 MISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRD 279
+I P+V FR+RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPF+TYHN+L D
Sbjct: 180 LIVNPQVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSQAGGADARPFITYHNTLEMD 239
Query: 280 LYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNI 339
LYLRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +
Sbjct: 240 LYLRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYADYNDMMAL 299
Query: 340 TEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKE 399
TE++++ V G + YQG EI L PWRR TMH LV+EATG+DFN ND + AK
Sbjct: 300 TEDLISSVTQEVLGTTKLTYQGEEIDLTPPWRRVTMHELVQEATGLDFNSF-NDFESAKV 358
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
+A G+E V ++G LLNE FE VE L+QPTFV+DYP+EISPLAKPH
Sbjct: 359 AAQKA---GIE-----VPNDCQTIGKLLNEAFEQKVEETLIQPTFVVDYPVEISPLAKPH 410
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
R AGL ERFELFI GRE AN+FSELTDPLDQR RLE Q E++AA
Sbjct: 411 RNKAGLVERFELFIVGRETANSFSELTDPLDQRERLEAQA----ERKAAG---------- 456
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
D +++V D+DF+ ALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK Q
Sbjct: 457 ----DVEAHDV--DEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKSQ 510
>gi|428780015|ref|YP_007171801.1| lysyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
gi|428694294|gb|AFZ50444.1| lysyl-tRNA synthetase (class II) [Dactylococcopsis salina PCC 8305]
Length = 519
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 309/539 (57%), Positives = 390/539 (72%), Gaps = 43/539 (7%)
Query: 45 RNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANG 104
+N + S+SS S +RA RI+KVE L+ +GL P+AYKW+ T A LQ+ Y +L NG
Sbjct: 7 KNPQQSASSLS-----EIRATRIQKVETLKQEGLNPFAYKWEITAYAEALQQQYVNLENG 61
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQL 158
EE ++E VS+AGR++ARR FGKLAF TL+D++GTIQLY +K+++ L + F+ L
Sbjct: 62 EEIDTE---VSIAGRIIARRVFGKLAFFTLQDETGTIQLYLDKKQITAEMDHLDNAFNLL 118
Query: 159 KVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYV 218
K D GDILGV G++KRTEKGELSV VN + ILTKSLLPLPDK+HGLTD +KRYRQRYV
Sbjct: 119 KKQTDTGDILGVKGTIKRTEKGELSVKVNQYEILTKSLLPLPDKWHGLTDTEKRYRQRYV 178
Query: 219 DMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGR 278
D+I P V + FRKRAKI+S +R+ +ES GF+E+ETPVLQG AGGA+ARPFVTYHN+L
Sbjct: 179 DLIVNPNVRETFRKRAKIISAMRRYLESAGFLEIETPVLQGEAGGADARPFVTYHNTLEM 238
Query: 279 DLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMN 338
DLYLRIATELHLKR+++GGF++++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MMN
Sbjct: 239 DLYLRIATELHLKRLIVGGFDRVFELGRIFRNEGVSTRHNPEFTSIELYQAYADYYDMMN 298
Query: 339 ITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAK 398
+TEEI+T A V G L + YQG I L PW+R TMH LV+E TG+DF + +
Sbjct: 299 LTEEIITCAANEVLGSLILYYQGETIDLNSPWKRATMHELVEEKTGVDFTQFSKFAEAKA 358
Query: 399 ETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKP 458
+ V + SVG LLNE FE VE L+QPTFVLD+P EISPLAKP
Sbjct: 359 AAENAGIN---------VPDDCESVGKLLNEAFEQTVEDTLIQPTFVLDFPKEISPLAKP 409
Query: 459 HRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQE 518
HR GL ERFEL+I GRE+AN+FSELTDP+DQR RLE Q K+AA E +
Sbjct: 410 HRSKPGLVERFELYISGREIANSFSELTDPIDQRERLELQA----AKKAAGDLEAHN--- 462
Query: 519 KLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+GIDR++MLLT+S SIRDVIAFP+L+
Sbjct: 463 -------------VDEDFLMALEYGMPPTGGLGIGIDRVIMLLTDSPSIRDVIAFPLLR 508
>gi|254421242|ref|ZP_05034960.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
gi|196188731|gb|EDX83695.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
Length = 524
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 301/523 (57%), Positives = 381/523 (72%), Gaps = 39/523 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA R++KVE+L+ GL+PYAY+W+ THSA QLQ + LA G E++ E VSVAGR++
Sbjct: 23 IRATRLQKVEDLKQAGLQPYAYRWEVTHSAAQLQAKFADLATGAEADFE---VSVAGRIM 79
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS-------DQFDQLKVFVDIGDILGVSGSM 174
ARR FGKLAF TL+D +GTIQLY EK+ + + F+ LK D GDILG G++
Sbjct: 80 ARRVFGKLAFFTLQDQTGTIQLYLEKKTIQAAMGEADEQAFNHLKQLTDAGDILGARGTI 139
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
KRT+KGELSV V + +LTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV D FRKRA
Sbjct: 140 KRTDKGELSVKVKHYAMLTKSLLPLPDKFHGLTDVAKRYRQRYVDLIVNPEVRDTFRKRA 199
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI + IR+ ++ LG++EVETPVLQ GGAEARPFVTYHN+L +LYLRIATELHLKRM+
Sbjct: 200 KITAAIRRHLDQLGYLEVETPVLQSEPGGAEARPFVTYHNTLDMELYLRIATELHLKRMV 259
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFEK++E+GR+FRNEG+STRHNPEFTTIEMY+AY DY+ MM++TE ++ + V G
Sbjct: 260 VGGFEKVFELGRVFRNEGISTRHNPEFTTIEMYQAYGDYEDMMSLTETMIEQIVVEVTGS 319
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
+ YQG EI RPW+R TMH+ V+E TGIDF ++ + K + + +
Sbjct: 320 KGVTYQGEEISFARPWQRITMHDAVREKTGIDFVQIKDLAKAKQAAKEAGINE------- 372
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
+E+ S+G++LNE FE VE LVQPTF+ DYP+EISPL+KPHR GL ERFELFI
Sbjct: 373 --VEACESIGHVLNEAFEQKVETTLVQPTFITDYPVEISPLSKPHRSKPGLVERFELFIV 430
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE AN FSELTDP+DQR RLE Q +A+++ + HS +D+
Sbjct: 431 GRETANGFSELTDPVDQRERLELQ----------------AAKKEAGNLEAHS----VDE 470
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+TALEYGMPP GMG+GIDRLVM+LT++ASIRD IAFP+LK
Sbjct: 471 DFLTALEYGMPPTVGMGIGIDRLVMVLTDAASIRDAIAFPLLK 513
>gi|428308911|ref|YP_007119888.1| lysyl-tRNA synthetase [Microcoleus sp. PCC 7113]
gi|428250523|gb|AFZ16482.1| lysyl-tRNA synthetase (class II) [Microcoleus sp. PCC 7113]
Length = 573
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 306/527 (58%), Positives = 385/527 (73%), Gaps = 38/527 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S+ EA+RA R++KV EL++ G+ PYAY+W TH A +LQE + HL +GEE + E V++
Sbjct: 14 SNLEAIRAARLEKVHELKAIGMNPYAYQWASTHHAAELQEKFAHLPDGEEVDLE---VAI 70
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS------DQFDQLKVFVDIGDILGV 170
AGR++ARR FGKLAF L+D++GTIQLY +K+++ S + F+ LK DIGDI+GV
Sbjct: 71 AGRILARRVFGKLAFFNLQDETGTIQLYLDKQKITSGMADVPNAFNHLKQLTDIGDIIGV 130
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G++KRTEKGELSV V+ + +LTKSLLPLPDK+HGLTD +KRYRQRYVD+I P V + F
Sbjct: 131 KGTIKRTEKGELSVYVSRYTMLTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPTVRETF 190
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+RAKI + IR+ +E F+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATEL L
Sbjct: 191 RRRAKITAAIRRYLEEQDFLEIETPVLQSEAGGAEARPFITYHNTLEMDLYLRIATELPL 250
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GGFEK++E+GRIFRNEG+STRHNPEFTT+E+Y+AY+DY MM +TE ++T A
Sbjct: 251 KRLVVGGFEKVFELGRIFRNEGISTRHNPEFTTVEVYQAYADYNDMMQLTENLITTAAQE 310
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G L I YQG EI L PWRR TMH LV+E TG+DF + L+ AK +A G
Sbjct: 311 VLGTLKISYQGQEIDLTPPWRRITMHQLVQEKTGLDFTQF-QTLEEAKTAARQAGITG-- 367
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+++ S+G LLNE FE VE L+QPTFVLDYP+EISPLAKPHR L ERFE
Sbjct: 368 ------VDACSSMGKLLNECFEQKVEETLIQPTFVLDYPVEISPLAKPHRDKPDLVERFE 421
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE AN+FSELTDP+DQR RLE Q ++AA E
Sbjct: 422 LFIVGRETANSFSELTDPIDQRERLEAQA----ARKAAGDLEAPG--------------- 462
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+TALEYGM P G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 463 -VDEDFITALEYGMAPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 508
>gi|302842054|ref|XP_002952571.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
nagariensis]
gi|300262210|gb|EFJ46418.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
nagariensis]
Length = 493
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 301/520 (57%), Positives = 385/520 (74%), Gaps = 33/520 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +R +R+KKV++LR G EPYAY +DRTH LQ++Y L NG E + V+VAGR
Sbjct: 3 EEIRDVRLKKVQDLRGLGQEPYAYGFDRTHFTKDLQDLYASLPNGAEDEA-GTLVAVAGR 61
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKR 176
V+A+R GKLAFL+LRDD G IQLY ++ RL + Q F+ +K VD+GDI+G SG++KR
Sbjct: 62 VLAKRVMGKLAFLSLRDDKGQIQLYVDRTRLDASQNEGFNTVKGLVDVGDIVGCSGTVKR 121
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
TEKGELSV+ +LTKSLLPLPDK+HGL+DV+KRYRQRY+D+I EV D FR R++I
Sbjct: 122 TEKGELSVVATGMQVLTKSLLPLPDKWHGLSDVEKRYRQRYLDLIMTAEVRDTFRARSRI 181
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S +R+ +E GF+EVETPVL+ AGGA+ARPF T+HNSLGRDL LRIATELHLKRM++G
Sbjct: 182 ISTLRRQLEDRGFIEVETPVLESVAGGADARPFRTFHNSLGRDLTLRIATELHLKRMVVG 241
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
GFE+++E+GR+FRNEGLS+RHNPEFT++E+Y+AY+DY MMN+TEE++ CA+ V G
Sbjct: 242 GFERVFELGRVFRNEGLSSRHNPEFTSVEIYQAYADYNDMMNLTEELIRVCAMEVRGSAQ 301
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
+ YQGV I +P+RR TM +LV+EA G+DF A R +G +
Sbjct: 302 VSYQGVAIDFSQPFRRVTMADLVREACGLDFE--------AAMAAARQVG---SAEAAAA 350
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
+ S+PS+G+LLNE+FE V E LVQPTFVL++P+EISPLAKPHR G+TERFELFI GR
Sbjct: 351 VRSAPSLGHLLNEMFEAVGEAGLVQPTFVLEHPVEISPLAKPHRSKPGVTERFELFIYGR 410
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAFSELTDP+DQRAR E QV +HN ++ QE+ K V LD DF
Sbjct: 411 EHANAFSELTDPVDQRARFEAQVARHN----------AAFQERQK--------VALDTDF 452
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPIL 576
+ ALEYGMPP G+G+G+DRLVMLLT+S SIRDVIAFP +
Sbjct: 453 IAALEYGMPPTGGLGIGVDRLVMLLTDSPSIRDVIAFPTM 492
>gi|17231563|ref|NP_488111.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|39932230|sp|Q8YPW9.1|SYK_NOSS1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|17133206|dbj|BAB75770.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 561
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/525 (58%), Positives = 380/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE +E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVETE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL D++GTIQLY EK R+ ++ F+ LK D+GDILG G
Sbjct: 61 IMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAEIDANAFNHLKQLTDVGDILGAKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPFVTYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFVTYHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMALTEGIITTVAQDVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH+LVKE TG+DF+ L+ AK A G
Sbjct: 301 GTLQITYQGETVDLTPPWRRVTMHDLVKEYTGLDFHSF-QTLEEAKSAGKNAGIPG---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++ + ++G +LN FE VE KL+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----VDEAQTIGKILNLAFEEKVETKLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLE Q K+AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRERLEAQA----AKKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>gi|411119116|ref|ZP_11391496.1| lysyl-tRNA synthetase (class II) [Oscillatoriales cyanobacterium
JSC-12]
gi|410710979|gb|EKQ68486.1| lysyl-tRNA synthetase (class II) [Oscillatoriales cyanobacterium
JSC-12]
Length = 514
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 306/540 (56%), Positives = 388/540 (71%), Gaps = 41/540 (7%)
Query: 45 RNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANG 104
R +R ST E +RA R++KVE+L+ G PYAY+W+ TH A LQ Y+ L NG
Sbjct: 3 REQRNQPEPQST--LEEIRATRLEKVEQLKQVGQNPYAYRWETTHHAADLQAKYKDLPNG 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQ 157
EE VS+AGR++A+R FGKLAF TL+D++GT+QLY EK+R+ + FD
Sbjct: 61 EEVAIA---VSLAGRILAKRVFGKLAFFTLQDETGTVQLYLEKKRIQEHMAAADPEAFDH 117
Query: 158 LKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRY 217
LK D+GDI+GV+G++KRTEKGELS+ VN++ +LTKSLLPLPDK+HGLTDV KRYRQRY
Sbjct: 118 LKQLTDVGDIIGVNGTIKRTEKGELSIYVNNYTMLTKSLLPLPDKWHGLTDVAKRYRQRY 177
Query: 218 VDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLG 277
VD+I P+V + FR+RA I + IR+ ++ GF+E+ETPVLQ AGGAEARPF+TYHN+L
Sbjct: 178 VDLIVNPDVRETFRRRALITASIRRYLDQQGFIEIETPVLQSEAGGAEARPFITYHNTLE 237
Query: 278 RDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMM 337
+LYLRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM
Sbjct: 238 MNLYLRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEVYQAYADYYDMM 297
Query: 338 NITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVA 397
N+TE I+T A V G L I YQG I L PW R TMH V+E GIDF++ +
Sbjct: 298 NLTETIITTAAQEVLGTLQITYQGQAIDLTPPWPRITMHEAVQEKIGIDFSQ----FQTL 353
Query: 398 KETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAK 457
+E A GL+ +E S+G LLNE FE VE L+QPTF+LDYP+EISPLAK
Sbjct: 354 EEAKAAATEVGLQE-----VEKCDSIGKLLNEAFEQTVEETLMQPTFILDYPVEISPLAK 408
Query: 458 PHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQ 517
PHR GL ERFELFI GRE AN+FSELTDP+DQR RLE Q +A+
Sbjct: 409 PHRSKPGLVERFELFIVGRETANSFSELTDPIDQRQRLEAQ----------------AAR 452
Query: 518 EKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ + + HS +D+DF+ ALE+GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 453 KEAGDLEAHS----VDEDFLAALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 508
>gi|75909357|ref|YP_323653.1| lysyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|123731434|sp|Q3M8C8.1|SYK_ANAVT RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|75703082|gb|ABA22758.1| Lysyl-tRNA synthetase, class-2 [Anabaena variabilis ATCC 29413]
Length = 561
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 303/525 (57%), Positives = 380/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE ++E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVDTE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL D++GTIQLY EK R+ +D F+ LK D+GDILG G
Sbjct: 61 IMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAETDADAFNHLKQLTDVGDILGAKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELS+ V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSIYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ GGA+ARPF+TYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSETGGADARPFITYHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GR+FRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRVFRNEGISTRHNPEFTSIEIYQAYADYNDMMALTEGIITTVAQDVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH+LVKE TG+DF+ L+ AK + A G
Sbjct: 301 GTLQITYQGETVDLTPPWRRVTMHDLVKEYTGLDFHSF-QTLEEAKSASKNAGIPG---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++ + ++G +LN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----VDEAQTIGKILNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLE Q K+AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRERLEAQA----AKKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>gi|359464185|ref|ZP_09252748.1| lysyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
Length = 517
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/537 (55%), Positives = 389/537 (72%), Gaps = 39/537 (7%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
RAS S S E VRA R++KVE+L+ GL PYAY+W TH+A LQE + LANGEE
Sbjct: 5 RASESPNQGSTLEEVRATRLQKVEQLKQAGLTPYAYRWQSTHTAQALQEKFVDLANGEEE 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSDQ----FDQLKV 160
+ E V++AGR++ARR FGKLAF L+D++GTIQLY EK+R+ + +Q F+ LK
Sbjct: 65 DFE---VAIAGRILARRVFGKLAFFNLQDETGTIQLYLEKKRIQEQMGEQDEQAFNHLKQ 121
Query: 161 FVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDM 220
D+GD +GV G++KRT+KGELSV V + +LTKSLLPLPDK+HGLTD+ KRYRQRYVD+
Sbjct: 122 LTDVGDFIGVQGTIKRTDKGELSVYVREYTVLTKSLLPLPDKWHGLTDIAKRYRQRYVDL 181
Query: 221 ISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDL 280
I P V + FR+RA+I + IR+ ++ GF+E+ETPVL AGGAEARPF+TYHN++ DL
Sbjct: 182 IVNPTVRETFRRRAQITASIRRYLDEQGFIEIETPVLNSEAGGAEARPFITYHNTMEMDL 241
Query: 281 YLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNIT 340
YLRIATELHLKR+++GGFEK++E+GR+FRNEG+STRHNPEFTTIE+Y+AY+DY MM++
Sbjct: 242 YLRIATELHLKRLIVGGFEKVFELGRVFRNEGISTRHNPEFTTIEVYQAYADYNDMMDLA 301
Query: 341 EEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKET 400
E ++ A G L + YQG I L PWRR TMH+ V+E TG+DF+ ++ A++
Sbjct: 302 EALICTAAERSVGSLKVPYQGETIDLTSPWRRVTMHDAVQEKTGLDFSTF-KTVEAAQKA 360
Query: 401 TLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHR 460
+ G+ + + SVG++LNE FE VE L+QPTF+LDYP+EISPLAKPHR
Sbjct: 361 ATKVGITGVADCE--------SVGHVLNEAFEQKVEATLMQPTFILDYPVEISPLAKPHR 412
Query: 461 RHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKL 520
GL ERFELFI GRE AN+FSELTDP+DQR RLE Q +A+++
Sbjct: 413 SQPGLVERFELFIVGRETANSFSELTDPVDQRQRLEAQ----------------AARKEA 456
Query: 521 KESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ + H +D+DF+TALEYGMPP G+G+GIDRL MLL+++ASIRDVIAFP+LK
Sbjct: 457 GDLEAHG----VDEDFITALEYGMPPTGGLGIGIDRLAMLLSDAASIRDVIAFPLLK 509
>gi|56751700|ref|YP_172401.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81301224|ref|YP_401432.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
gi|81561805|sp|Q5N1D9.1|SYK_SYNP6 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123769185|sp|Q31KH4.1|SYK_SYNE7 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|56686659|dbj|BAD79881.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81170105|gb|ABB58445.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
Length = 504
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 307/523 (58%), Positives = 380/523 (72%), Gaps = 39/523 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA R++K +LR G EPYAY+WD +HSA QLQ +Y L GEE E V++AGR++
Sbjct: 4 LRATRLEKALQLRELGFEPYAYRWDCSHSAAQLQALYADLPAGEEVAVE---VAIAGRIM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSM 174
ARR FGKLAF TL+D+SG IQLY EK+RL ++ F LK D+GDILGV GS+
Sbjct: 61 ARRVFGKLAFFTLQDESGQIQLYLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSV 120
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
+RTEKGELS+ V+ + ILTKSL PLPDK+HGLTDV+KRYRQRYVD+I PEV + FR+RA
Sbjct: 121 RRTEKGELSIAVDQYAILTKSLQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRA 180
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI + IR+ +E GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATELHLKR++
Sbjct: 181 KITAAIRRHLEDQGFIEIETPVLQAEAGGAEARPFITYHNTLELDLYLRIATELHLKRLI 240
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY+ MM +TE ++ A V G
Sbjct: 241 VGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYEDMMRLTETLIAQVAEQVVGS 300
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
L + YQG I L PW+R TM LV ATGIDF L DL+ A ++A G
Sbjct: 301 LQVPYQGQTIDLAPPWKRATMAELVLAATGIDFESL-KDLE-AGIAAVKAAGIP------ 352
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V E P++G LLN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELFI
Sbjct: 353 -VPEDCPNLGKLLNHCFEEKVEATLIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIV 411
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE AN+FSELTDP+DQR RLE Q +K A V E++D +D+
Sbjct: 412 GRETANSFSELTDPVDQRQRLEAQA---ADKAAGNV-----------EAND------VDE 451
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ ALE+GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 DFLLALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 494
>gi|434391667|ref|YP_007126614.1| lysyl-tRNA synthetase, class II [Gloeocapsa sp. PCC 7428]
gi|428263508|gb|AFZ29454.1| lysyl-tRNA synthetase, class II [Gloeocapsa sp. PCC 7428]
Length = 575
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 301/525 (57%), Positives = 382/525 (72%), Gaps = 40/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KV +L+ G+ PYAY+W+ TH A QLQE + L +GEE + E V++AGR
Sbjct: 16 EEIRAARLEKVAQLKQLGMNPYAYRWEVTHHAAQLQEKFADLPSGEEVDVE---VAIAGR 72
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS-------DQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF +L+D++GTIQLY +K+R+ D F+ LK D+GDILG G
Sbjct: 73 ILARRVFGKLAFFSLQDETGTIQLYLDKKRIQQGMASTDPDAFNHLKQLTDVGDILGAKG 132
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+TEKGELSV V+ + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I PEV FR+
Sbjct: 133 TVKKTEKGELSVNVSEYAILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPEVQQTFRR 192
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E+ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELHLKR
Sbjct: 193 RAQITAGIRRYLEAQGFIEIETPVLQPEAGGADARPFITYHNALDMELYLRIATELHLKR 252
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK++E+GRIFRNEG+STRHNPEFT++E+Y+AY DY MM +TE+++T A V
Sbjct: 253 MIVGGFEKVFELGRIFRNEGVSTRHNPEFTSVEVYQAYGDYNDMMALTEDLITTVAQEVL 312
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG I L PWRR TMH+LVKE TG+DF L+ AK T ++G +E+
Sbjct: 313 GTLQITYQGEAIDLTPPWRRVTMHDLVKEFTGLDFAAFST-LEEAK-TAAASVGIDVEDC 370
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
D S+G +LNE FE E +L+QPT+VLDYP+EISPLAKPHR GL ERFELF
Sbjct: 371 D--------SIGKVLNEAFEQKAESQLIQPTYVLDYPVEISPLAKPHRSKPGLVERFELF 422
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN FSELTDP+DQR RLE Q ++AA E +
Sbjct: 423 IVGRETANGFSELTDPIDQRQRLEAQA----ARKAAGDLEAQG----------------V 462
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDR VMLLT+ ASIRD IAFP+LK
Sbjct: 463 DEDFITALEYGMPPTVGLGIGIDRFVMLLTDCASIRDAIAFPLLK 507
>gi|254416475|ref|ZP_05030227.1| lysyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176679|gb|EDX71691.1| lysyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
Length = 516
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 303/537 (56%), Positives = 381/537 (70%), Gaps = 42/537 (7%)
Query: 51 SSSTSTSDR----EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEE 106
S S DR E +RA R++KV++L++ G+EPYAY W TH A +LQE + L NGEE
Sbjct: 2 SPEQSPPDRQNTLEEIRATRLEKVQQLKALGIEPYAYHWQSTHQAAELQEKFADLGNGEE 61
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKV 160
+ E V++AGR++ARR FGKLAF L+D++GTIQLY +K+R+ L + F LK
Sbjct: 62 VDFE---VAIAGRILARRVFGKLAFFNLQDETGTIQLYLDKKRITATMTDLPNPFTPLKQ 118
Query: 161 FVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDM 220
DIGDILGV G++KRT+KGELSV V+ + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+
Sbjct: 119 LTDIGDILGVKGTIKRTDKGELSVYVSEYAILTKSLLPLPDKWHGLTDTEKRYRQRYVDL 178
Query: 221 ISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDL 280
+ P V + FR+RAKI + IR+ +E GF+E+ETPV AGGAEARPF+TYHN+L +L
Sbjct: 179 MVNPTVRETFRRRAKITAAIRRYLEDRGFIEIETPVFSTEAGGAEARPFITYHNTLEMEL 238
Query: 281 YLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNIT 340
YLRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +T
Sbjct: 239 YLRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMTLT 298
Query: 341 EEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKET 400
E ++T L I YQG I PWRR TMH LV+E TG+DFN+ K E
Sbjct: 299 ENLITTVTQESLTTLEITYQGETIDFTPPWRRVTMHELVQEVTGLDFNQ----FKTFDEA 354
Query: 401 TLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHR 460
+ A G+E +E PS+G LLNE FE E L+QPTF++D+PIEISPLAKPHR
Sbjct: 355 KIAAKKVGIEG-----VEDCPSLGKLLNECFEQKCEETLIQPTFIVDFPIEISPLAKPHR 409
Query: 461 RHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKL 520
GL ERFELF+ GRE AN+FSELTDP+DQR RLE Q ++AA E
Sbjct: 410 SKPGLVERFELFMAGRETANSFSELTDPIDQRERLEAQA----ARKAAGDLEAQG----- 460
Query: 521 KESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 461 -----------VDEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 506
>gi|427718156|ref|YP_007066150.1| lysyl-tRNA synthetase [Calothrix sp. PCC 7507]
gi|427350592|gb|AFY33316.1| Lysyl-tRNA synthetase [Calothrix sp. PCC 7507]
Length = 561
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 302/525 (57%), Positives = 377/525 (71%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+++ G PYAY+W+ TH A QLQ + L +GEE++ E V++AGR
Sbjct: 4 EDIRAARLEKVEQIKQLGFNPYAYRWESTHHAAQLQAKFVDLPSGEENDLE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL+D++G IQLY EK R+ +D F+ +K D GDILGV G
Sbjct: 61 IIARRVFGKLAFFTLQDETGLIQLYLEKNRIQEGMADIDADAFNHIKQLTDAGDILGVKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKQYSILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGAEARPFVTYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGAEARPFVTYHNTLDMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEIYQAYADYNDMMALTEGIITTVAQEVI 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH+LVKE G+DF+ TL A +N
Sbjct: 301 GTLEITYQGENLDLTPPWRRATMHDLVKEYAGLDFHSF---------QTLEAAKTASKNA 351
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
+++ S+G LLN FE VE KL+QPTFV+DYP+EISPL+KPHR GL ERFELF
Sbjct: 352 GIADVDAVESIGKLLNLAFEEKVETKLIQPTFVIDYPVEISPLSKPHRSKPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
+ GRE AN+FSELTDP++QR RLE Q K+AA E +
Sbjct: 412 VVGRETANSFSELTDPIEQRERLEAQA----AKKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVM LT++ASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMFLTDAASIRDVIAFPLLK 496
>gi|443311640|ref|ZP_21041266.1| lysyl-tRNA synthetase (class II) [Synechocystis sp. PCC 7509]
gi|442778369|gb|ELR88636.1| lysyl-tRNA synthetase (class II) [Synechocystis sp. PCC 7509]
Length = 576
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 298/537 (55%), Positives = 381/537 (70%), Gaps = 45/537 (8%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ + S S+ + +RA R++KV +L+ G+ PYAY W+ TH A QLQE Y L +GEE +
Sbjct: 6 NQTQSASNLDELRAARLEKVAQLQELGINPYAYSWESTHHAAQLQETYAELISGEEVDV- 64
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS-------DQFDQLKVFVD 163
V++AGR++ARR FGKLAF +L+D++GTIQLY +K R+ D F+ +K D
Sbjct: 65 --IVAIAGRILARRVFGKLAFFSLQDETGTIQLYLDKNRISQSMADIDPDAFNHIKQLTD 122
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
+GDI+GV G++KRTEKGELSV VN + +LTKSLLPLPDK+HGLTD +KRYRQRYVD+I
Sbjct: 123 VGDIIGVKGTIKRTEKGELSVYVNQYTVLTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVN 182
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
P+V FR+RA+I + +R+ ++ LGF+E+ETPVLQ AGGA+ARPFVTYHN+L +LYLR
Sbjct: 183 PQVRQTFRRRAQITAGLRRYLDKLGFIEIETPVLQSEAGGADARPFVTYHNTLEMELYLR 242
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM +TE
Sbjct: 243 IATELHLKRLIVGGFEKVFELGRIFRNEGVSTRHNPEFTTIELYQAYADYFDMMALTENA 302
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR 403
+ V G L I+YQG EI PWRR TMH +V++ATGI+FN T
Sbjct: 303 IATVTEEVLGTLQINYQGQEIDFTLPWRRVTMHQVVEDATGINFN------------TFS 350
Query: 404 ALGDGLENKDKFVIESSP---SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHR 460
+ +K I SP S+G LLNEVFE VE L+QPTF+ DYP+EISPLAKPHR
Sbjct: 351 TFTEAKAATEKAGIAVSPEVNSIGRLLNEVFEEKVETTLIQPTFITDYPVEISPLAKPHR 410
Query: 461 RHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKL 520
GL ERFELFI GRE AN+FSELTDP++QR RLE Q +
Sbjct: 411 SQPGLVERFELFIVGRETANSFSELTDPIEQRQRLEAQAARK------------------ 452
Query: 521 KESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E D ++ V D+DF+TALEYGMPP G+G+GIDRLVM+LT+ ASIRD IAFP+LK
Sbjct: 453 AEGDLEAHGV--DEDFLTALEYGMPPTGGLGIGIDRLVMVLTDCASIRDAIAFPLLK 507
>gi|427709434|ref|YP_007051811.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7107]
gi|427361939|gb|AFY44661.1| lysyl-tRNA synthetase, class II [Nostoc sp. PCC 7107]
Length = 561
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 303/525 (57%), Positives = 376/525 (71%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KV +++ G PY+Y+W+ +H A QLQE + LA+GEE + E V+VAGR
Sbjct: 4 EDIRAARLEKVAQIKQLGGNPYSYRWESSHHAAQLQEKFADLASGEEVDLE---VTVAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL+D++G IQLY EK R+ +D F+ LK D GDILGV G
Sbjct: 61 IMARRVFGKLAFFTLQDETGNIQLYLEKNRIQESMAEIDADAFNHLKQLTDAGDILGVKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPFVTYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFVTYHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMALTEGIITTVAQDVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH++VKEATG+DFN + + E +
Sbjct: 301 GTLQITYQGETVDLTPPWRRVTMHDVVKEATGLDFNAFSTLEEAKAAAKNAGIPGAGEAQ 360
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
S+G +LN VFE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 361 ---------SIGKILNLVFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQLGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLE Q ++AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRERLEAQA----ARKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>gi|427420959|ref|ZP_18911142.1| lysyl-tRNA synthetase (class II) [Leptolyngbya sp. PCC 7375]
gi|425756836|gb|EKU97690.1| lysyl-tRNA synthetase (class II) [Leptolyngbya sp. PCC 7375]
Length = 511
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 309/539 (57%), Positives = 382/539 (70%), Gaps = 40/539 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
ASS S RE +RA R++K+ EL+ GL PYAYKWD TH A LQ+ + L GEE+
Sbjct: 2 ASSQPNDQSPRE-IRAARLQKISELKKLGLNPYAYKWDVTHQAAILQKKFADLPTGEETE 60
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSD----QFDQLKVF 161
E VS+AGR++ARR GKLAF L+D++G+IQL+ +K+ + ++D F LK
Sbjct: 61 VE---VSIAGRIMARRVLGKLAFFKLQDETGSIQLFLDKKTIQAGMADIDEQAFTHLKQL 117
Query: 162 VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI 221
D+GD LGV G +KRT+KGELSV VN++ ILTK+LLPLPDK+HGLTDV KRYRQR VD+I
Sbjct: 118 TDVGDFLGVKGIVKRTDKGELSVKVNTYAILTKALLPLPDKWHGLTDVAKRYRQRSVDLI 177
Query: 222 SKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLY 281
PEV D FRKRA+I + IR+ ++ F+E+ETPVLQ GGA+ARPFVTYHN+L LY
Sbjct: 178 VNPEVRDTFRKRARITASIRRYLDQQDFIEIETPVLQTEPGGADARPFVTYHNTLDMQLY 237
Query: 282 LRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITE 341
LRIATELHLKR+++GGFE+++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM+ITE
Sbjct: 238 LRIATELHLKRLIVGGFERVFEMGRIFRNEGISTRHNPEFTSIELYQAYADYHDMMDITE 297
Query: 342 EIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETT 401
++ + A V G I YQG I L PW+R TMH+ V+E TG++F E DL E
Sbjct: 298 ALILNAADEVLGTTKITYQGDAIDLSTPWKRITMHDAVQEKTGVNFAEF-TDL---DEAK 353
Query: 402 LRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
A GL I+ PS+G +LNE FE VEP L+QPTF+ DYP+EISPLAKPHR
Sbjct: 354 AAAKAAGLHG-----IDDCPSIGYVLNEAFEQTVEPTLIQPTFITDYPVEISPLAKPHRH 408
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
GL ERFELFI GRE AN+FSELTDP+DQR RLE Q K+AA E S
Sbjct: 409 KPGLVERFELFIVGRETANSFSELTDPVDQRQRLEAQA----AKKAAGDLEAHS------ 458
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LD+DFVTALEYGMPP GMG+GIDRLVMLLT+S SIRDVIAFP+LK +Q
Sbjct: 459 ----------LDEDFVTALEYGMPPTGGMGMGIDRLVMLLTDSPSIRDVIAFPLLKPEQ 507
>gi|428207584|ref|YP_007091937.1| lysyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
gi|428009505|gb|AFY88068.1| lysyl-tRNA synthetase, class II [Chroococcidiopsis thermalis PCC
7203]
Length = 501
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 301/528 (57%), Positives = 378/528 (71%), Gaps = 45/528 (8%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+LR GL PYAY+W+ TH A QLQE Y L NGEE E V++AGR
Sbjct: 4 EDIRATRLEKVEQLRQLGLNPYAYRWESTHHAAQLQEKYADLPNGEEVEIE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS-------DQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF L+D++GTIQLY +K+R+ + D F+ LK D GDILG G
Sbjct: 61 IIARRVFGKLAFFGLQDETGTIQLYLDKKRIDTTMAEIDPDAFNHLKQLTDAGDILGAKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV VN + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVFVNQYAILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E GF+E+ETPVLQ AGGA+ARPF+T+HN+L DLYLRIATELHLKR
Sbjct: 181 RAQITAGIRRFLEQQGFIEIETPVLQAEAGGADARPFITHHNTLEMDLYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY +M + E I+T V
Sbjct: 241 LVVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEIYQAYADYHDVMQLVENIITTVTREVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELG--NDLKV-AKETTLRALGDGL 409
G L I YQ I L PWRR TMH+LV+E TG+DF+ ++ KV AK+ ++A
Sbjct: 301 GTLQITYQDEAIDLTPPWRRVTMHDLVQEKTGLDFHAFSSLDEAKVAAKQAGIQA----- 355
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
+E S+G LLNE FE E L+QPT+V+DYP+EISPL+KPHR GL ERF
Sbjct: 356 -------VEECTSIGKLLNETFEQSCEATLIQPTYVIDYPVEISPLSKPHRSKPGLVERF 408
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
ELF+ GRE AN FSEL+DP+DQR RLE Q ++AA E
Sbjct: 409 ELFVAGRETANGFSELSDPIDQRQRLEAQA----ARKAAGDLEAQG-------------- 450
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+TALEYG+PP G+G+GIDRLVMLLT+ ASIRD IAFP+LK
Sbjct: 451 --VDEDFLTALEYGLPPTGGVGIGIDRLVMLLTDCASIRDAIAFPLLK 496
>gi|332707653|ref|ZP_08427681.1| lysyl-tRNA synthetase, class II [Moorea producens 3L]
gi|332353562|gb|EGJ33074.1| lysyl-tRNA synthetase, class II [Moorea producens 3L]
Length = 572
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 303/531 (57%), Positives = 386/531 (72%), Gaps = 38/531 (7%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
+ STS E +R R++KVE+L+++GL PYAY W+ T A +LQ+ Y L NGEE + E
Sbjct: 9 AQSTSTLEEIRTTRLEKVEQLKAEGLIPYAYNWESTAQAAELQQNYADLGNGEEVDVE-- 66
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGD 166
V+VAGR++ARR FGKLAF ++D++GTIQLY +K+R+ L + F+ LK D GD
Sbjct: 67 -VAVAGRIIARRVFGKLAFFNIQDETGTIQLYLDKKRITAKMADLPNAFNILKKLTDTGD 125
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+G G++KRTEKGELS+ V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 126 IIGAKGTIKRTEKGELSIYVKEYDILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPDV 185
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+ FR+RAKI + IR + F+E+ETPVLQ AGGA+ARPF+TYHN+L DLYLRIAT
Sbjct: 186 RETFRRRAKITASIRHYLNQQDFIEIETPVLQSEAGGADARPFITYHNTLQMDLYLRIAT 245
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GGFEK+YE+GR+FRNEG+STRHNPEFT IE+Y+AY+DY MM +TE ++++
Sbjct: 246 ELHLKRLIVGGFEKVYELGRVFRNEGISTRHNPEFTMIEIYQAYADYNQMMVLTENLISN 305
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A V G LTI+YQG I L PWR+ TM LVK+ G+DF++ N ++ AK A
Sbjct: 306 AAKEVLGTLTINYQGEVIDLTPPWRKVTMQELVKDQIGLDFDKFTN-IEQAKAAAKDA-- 362
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
G+E V S+G LLNE FE VE L+QPTFVLDYP+EISPL KPHR +GL
Sbjct: 363 -GVE-----VPNDCYSIGKLLNEAFEQKVEETLIQPTFVLDYPVEISPLTKPHRSKSGLV 416
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
ERFELFI GRE AN++SELTDP+DQR RLE Q ++AA E AQ+
Sbjct: 417 ERFELFIVGRETANSYSELTDPIDQRQRLEAQA----ARKAAGDLE---AQD-------- 461
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 462 -----VDEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 507
>gi|434387315|ref|YP_007097926.1| lysyl-tRNA synthetase (class II) [Chamaesiphon minutus PCC 6605]
gi|428018305|gb|AFY94399.1| lysyl-tRNA synthetase (class II) [Chamaesiphon minutus PCC 6605]
Length = 518
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 296/522 (56%), Positives = 379/522 (72%), Gaps = 38/522 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA R+ K ++LR G+ PYAY W TH A LQ Y LANGEE ++ VS+AGR++
Sbjct: 19 IRATRLVKADKLRELGMNPYAYNWVSTHQAAALQLEYADLANGEEVDTP---VSIAGRII 75
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILGVSGSMK 175
ARR GKLAF +++D++GTIQLY K+++ L D F LK D+GDI+GV G++K
Sbjct: 76 ARRVMGKLAFFSIQDETGTIQLYLAKQQIEEGMPALPDAFSHLKQLSDVGDIIGVRGTIK 135
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
R +KGELS+LVN + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV D FRKR+
Sbjct: 136 RADKGELSILVNEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRDTFRKRSL 195
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I + IR+ +E+L F+E+ETPVLQ AGGA+ARPF TYHN+L LYLRIATELHLKR+++
Sbjct: 196 ITAGIRRYLENLDFIEIETPVLQSEAGGADARPFNTYHNTLEMPLYLRIATELHLKRLIV 255
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY+ MM +TE+++T A +V G L
Sbjct: 256 GGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYADYEDMMKLTEQMITTVAQSVLGTL 315
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I YQG I L PWRR TM+++VKE TG+DF+ + L+ A+ A G+ D
Sbjct: 316 EISYQGTPISLTAPWRRVTMNDIVKEVTGLDFSSF-DSLETARSAVKNA---GIGGGDDI 371
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
++G L+NEVFE E L+QPTFVLDYP+EISPLAKPHR G+ ERFELF+ G
Sbjct: 372 -----QTLGKLMNEVFEQKCETTLIQPTFVLDYPVEISPLAKPHRSKPGIVERFELFVVG 426
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE+AN+FSELTDP+DQR RLE Q + E DD ++++ D+D
Sbjct: 427 RELANSFSELTDPVDQRERLEAQAARK------------------AEGDDEAHDI--DED 466
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+TALEYGMPP G+G+GIDRLVMLL + ASIRD IAFP+LK
Sbjct: 467 FLTALEYGMPPTGGLGIGIDRLVMLLCDCASIRDAIAFPLLK 508
>gi|427714325|ref|YP_007062949.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 6312]
gi|427378454|gb|AFY62406.1| lysyl-tRNA synthetase (class II) [Synechococcus sp. PCC 6312]
Length = 508
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 301/536 (56%), Positives = 389/536 (72%), Gaps = 39/536 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A ++ S S E ++A R +KV +LR G+ PYAY++DRTHSA QLQ Y L +GE +
Sbjct: 2 AEATDHSGSGLEEIKATRREKVAKLRDLGINPYAYQFDRTHSAAQLQAQYVDLKDGETVD 61
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ-------FDQLKVF 161
+ V+VAGR++ RR FGKLAF TL+D+S TIQLY +K+ + ++ FD LK
Sbjct: 62 VQ---VAVAGRILNRRVFGKLAFFTLQDESDTIQLYLDKQTIQANMGETDPQAFDHLKQL 118
Query: 162 VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI 221
D GDILG G++KRTEKGELSV V+++ ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I
Sbjct: 119 TDAGDILGAVGTIKRTEKGELSVYVHTYTILTKSLLPLPDKWHGLTDVEKRYRQRYVDLI 178
Query: 222 SKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLY 281
P+V FR+RA I + IR+ ++ GF+E+ETPVLQ AGGAEARPF+TYHN+L LY
Sbjct: 179 VNPQVRQTFRQRALITAAIRRYLDEQGFIEIETPVLQAEAGGAEARPFITYHNTLEMQLY 238
Query: 282 LRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITE 341
LR+A ELHLKR+++GGFEKI+E+GR+FRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE
Sbjct: 239 LRVAPELHLKRLIVGGFEKIFEMGRLFRNEGISTRHNPEFTSIEIYQAYADYTEMMTLTE 298
Query: 342 EIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETT 401
++T+ A V G L I+YQG +I L PWRR TM ++V+EATG+DF + N L AK
Sbjct: 299 TLITYAAETVLGTLQINYQGQKIDLTPPWRRVTMFDVVQEATGMDFRKFRN-LTEAKAAA 357
Query: 402 LRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
A G+++ +E ++G +LNE FE VEP L+QPTFVLDYP+EISPLAKPHR
Sbjct: 358 QNA---GIKD-----VEKCDTIGRVLNEAFEQAVEPNLIQPTFVLDYPVEISPLAKPHRS 409
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
GL ERFELFI GRE AN+FSELTD +DQR RLE Q +A+++
Sbjct: 410 QPGLVERFELFIVGRETANSFSELTDAVDQRQRLEAQ----------------AARKEAG 453
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ + HS +D+DF+ ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 454 DLEAHS----IDEDFLAALEQGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 505
>gi|425471135|ref|ZP_18849995.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
gi|389883030|emb|CCI36558.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
Length = 573
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 299/530 (56%), Positives = 379/530 (71%), Gaps = 38/530 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+S E +RA R++KV L+ GL PYAY+W T A QLQE Y LA GEE ++E V+
Sbjct: 13 SSTLEEIRAARLEKVAGLQKAGLNPYAYQWKSTAHAQQLQEQYADLAPGEEISTE---VA 69
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILG 169
+AGR++ARR GKLAF L+D++GTIQLY +K+R+ + + F+ + D GDILG
Sbjct: 70 IAGRIIARRIMGKLAFFNLQDETGTIQLYLDKKRISETMAAVPNAFNTVIKLTDTGDILG 129
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
G++KRTE+GELS+ VN + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PEV
Sbjct: 130 AKGTIKRTERGELSIYVNQYEILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQT 189
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELH
Sbjct: 190 FRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELH 249
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+ + A
Sbjct: 250 LKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVNAAQ 309
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G L I YQ EI L PWRR TMH LV+E TG+D N D + A+
Sbjct: 310 DVLGTLKITYQDTEIDLTPPWRRVTMHELVQEITGVDLNSF-EDFESARIAA-------- 360
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
EN V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPHR L ERF
Sbjct: 361 ENAGIGVPEDCKTIGKLLNEAFEQKVEETLIQPTFVLDFPVEISPLAKPHRSKTDLVERF 420
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
EL++ GRE+AN+FSELTDP+DQR RLE Q K+AA E
Sbjct: 421 ELYVVGRELANSFSELTDPIDQRQRLEAQAL----KKAAGDLEAQG-------------- 462
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 --VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|255086717|ref|XP_002509325.1| predicted protein [Micromonas sp. RCC299]
gi|226524603|gb|ACO70583.1| predicted protein [Micromonas sp. RCC299]
Length = 566
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/540 (57%), Positives = 394/540 (72%), Gaps = 32/540 (5%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ TS E V+ALRI KV +LR G EP+AY++DRTH+A QLQ I++ LA+G E E
Sbjct: 47 AEGAGTSSAEEVKALRIAKVAQLRDAGAEPFAYRFDRTHTATQLQSIHKDLADGAEV--E 104
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSDQFDQLKVFVDIGDI 167
+V GRV ARR FGKLAFL+L DD G+IQLYC+K+R+ F ++ VD+GDI
Sbjct: 105 GTVEAVCGRVKARRVFGKLAFLSLEDDGGSIQLYCDKKRIDAVTPGAFKRIVDLVDMGDI 164
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G G++KRTEKGELS+ V+SF +LTKSLLPLPDK+ GLTDV+ RYRQRYVD+I+ PEV
Sbjct: 165 VGARGTVKRTEKGELSIAVDSFEMLTKSLLPLPDKFKGLTDVEMRYRQRYVDLIANPEVR 224
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D FR RA IVS IR+ ++ F+E+ETPVL+ AGGA+A+PF T+HN+LG +L LRIATE
Sbjct: 225 DTFRARAGIVSGIRRFLDDRAFMEMETPVLETRAGGADAKPFNTFHNALGMNLTLRIATE 284
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+D M+ +TEE++ +C
Sbjct: 285 LHLKRLVVGGFERVYEMGRIFRNEGISTRHNPEFTSVEVYQAYADVSDMLELTEEMICYC 344
Query: 348 ALAVN-GKLTIDYQGVEICL-ERPWRRETMHNLVKEATGID-FNELGND-----LKVAKE 399
N G L I Y I L +RPWRR M++LVKEA G+D + G++ K A E
Sbjct: 345 CERANGGALKIQYGDELIDLGQRPWRRAPMNDLVKEAAGVDVMGDYGHNGDLAGAKAAAE 404
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
LRALGD ++ +PSVG++LNE+FE VE KL QPTFVLD+P+EISPLAKPH
Sbjct: 405 AALRALGDKESMSGIPGVQQAPSVGHVLNEMFEATVETKLRQPTFVLDHPVEISPLAKPH 464
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
R G+TERFELFI GRE+AN+FSELTDP+DQR RLE Q+ H
Sbjct: 465 RAKPGVTERFELFIVGRELANSFSELTDPVDQRTRLESQIETHR---------------- 508
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+ Y + +D+DFVTALEYGMPP +GMGLG+DRLVMLLTNSASIRDVIAFP+LK Q
Sbjct: 509 ---YEAELYPIAMDEDFVTALEYGMPPTAGMGLGVDRLVMLLTNSASIRDVIAFPLLKSQ 565
>gi|425456505|ref|ZP_18836215.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
gi|389802383|emb|CCI18563.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
Length = 573
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/530 (56%), Positives = 379/530 (71%), Gaps = 38/530 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+S E +RA R++KV L+ GL PYAY+W T A QLQE Y LA GEE ++E V+
Sbjct: 13 SSTLEEIRAARLEKVAGLQKAGLNPYAYQWKSTAHAQQLQEQYADLAPGEEISTE---VA 69
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILG 169
+AGR++ARR GKLAF L+D++GTIQLY +K+R+ + + F+ + D GDILG
Sbjct: 70 IAGRIIARRIMGKLAFFNLQDETGTIQLYLDKKRISETMSAVPNAFNTVIKLTDTGDILG 129
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
G++KRTE+GELS+ VN + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PEV
Sbjct: 130 AKGTIKRTERGELSIYVNEYEILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQT 189
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELH
Sbjct: 190 FRRRAQITASIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELH 249
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+ + A
Sbjct: 250 LKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVNAAQ 309
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G L I YQ EI L PWRR TMH LV+E TG+D N D + A+
Sbjct: 310 DVLGTLKITYQDREINLTPPWRRVTMHELVQEITGVDLNSF-EDFESARIAA-------- 360
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
EN V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPHR L ERF
Sbjct: 361 ENAGIGVPEDCKTIGKLLNEAFEQKVEETLIQPTFVLDFPVEISPLAKPHRSKTDLVERF 420
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
EL++ GRE+AN+FSELTDP+DQR RLE Q K+AA E
Sbjct: 421 ELYVVGRELANSFSELTDPIDQRQRLEAQAL----KKAAGDLEAQG-------------- 462
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 --VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|390437781|ref|ZP_10226300.1| Lysyl-tRNA synthetase [Microcystis sp. T1-4]
gi|389838821|emb|CCI30424.1| Lysyl-tRNA synthetase [Microcystis sp. T1-4]
Length = 573
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/530 (56%), Positives = 379/530 (71%), Gaps = 38/530 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+S E +RA R++KV L+ GL PYAY+W T A QLQE Y LA GEE ++E V+
Sbjct: 13 SSTLEEIRAARLEKVAGLQKAGLNPYAYQWKSTAHAQQLQEQYADLAPGEEISTE---VA 69
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILG 169
+AGR++ARR GKLAF L+D++GTIQLY +K+R+ + + F+ + D GDILG
Sbjct: 70 IAGRIIARRIMGKLAFFNLQDETGTIQLYLDKKRISETMAAVPNAFNTVIKLTDTGDILG 129
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
G++KRTE+GELS+ VN + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PEV
Sbjct: 130 AKGTIKRTERGELSIYVNQYEILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQT 189
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELH
Sbjct: 190 FRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELH 249
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+ + A
Sbjct: 250 LKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVNAAQ 309
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G L I YQ EI L PWRR TMH LV+E TG+D N D + A+
Sbjct: 310 DVLGTLKITYQDREIDLTPPWRRVTMHELVQEITGVDLNSF-EDFESARIAA-------- 360
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
EN V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPHR L ERF
Sbjct: 361 ENAGIGVPEDCKTIGKLLNEAFEQKVEETLIQPTFVLDFPVEISPLAKPHRSKTDLVERF 420
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
EL++ GRE+AN+FSELTDP+DQR RLE Q K+AA E
Sbjct: 421 ELYVVGRELANSFSELTDPIDQRQRLEAQAL----KKAAGDLEAQG-------------- 462
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 --VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|220905826|ref|YP_002481137.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
gi|219862437|gb|ACL42776.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
Length = 509
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 298/535 (55%), Positives = 384/535 (71%), Gaps = 36/535 (6%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS 109
S+ + +S E +RA R+ KV++L+ G PYAY+W+ +H A +LQ + L +G E
Sbjct: 7 SAPAQPSSTLEDIRATRLDKVDKLKQAGCNPYAYRWEVSHHAAELQRQFADLPSGAEVEL 66
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLL----SDQFDQLKVFVDIG 165
E V +AGR++ARR GKLAF TL+D++GTIQLY EK+RL ++ F +L +D G
Sbjct: 67 E---VGLAGRIMARRFMGKLAFATLQDETGTIQLYLEKQRLADHMDAEAFKRLDKLMDTG 123
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
DI+GV G++KRTEKGELS+ V+ + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PE
Sbjct: 124 DIVGVRGTVKRTEKGELSIAVSEYAILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPE 183
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V + FR+RA I + IR+ ++ F+E+ETPVLQ AGGAEARPF+TYHN+L +YLRIA
Sbjct: 184 VRETFRRRALITAAIRRYLDQQDFIEIETPVLQLEAGGAEARPFITYHNTLEMQMYLRIA 243
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
TELHLKR+++GGFEK++E+GR+FRNEG+STRHNPEFTTIE+Y+AY+DYQ MM +TE ++
Sbjct: 244 TELHLKRLIVGGFEKVFELGRVFRNEGISTRHNPEFTTIEIYQAYADYQDMMALTENLIV 303
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL 405
A V G L IDYQG EI L PW+R TM +V++ TG+DF++ TTL
Sbjct: 304 TAAETVLGTLKIDYQGTEIDLTPPWQRITMWEVVQQKTGLDFSQF---------TTLDEA 354
Query: 406 GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
+ +E S+G +LNE FE VE L+QPTFVLDYP+EISPLAKPHR GL
Sbjct: 355 KAAADQAGIVDLEKCDSIGKVLNEAFEQKVEATLMQPTFVLDYPVEISPLAKPHRSQPGL 414
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
ERFELFI GRE AN+FSELTDP+DQR RLE Q E++AA E S
Sbjct: 415 VERFELFIVGRETANSFSELTDPIDQRQRLELQA----ERKAAGDLEAHS---------- 460
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+D+DF+TALE+GMPP G+G+GIDRLVMLLTN+ASIRDVIAFP+LK ++
Sbjct: 461 ------VDEDFLTALEHGMPPTGGLGIGIDRLVMLLTNAASIRDVIAFPVLKAEK 509
>gi|425443336|ref|ZP_18823556.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
gi|389715391|emb|CCI00232.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
Length = 573
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 298/530 (56%), Positives = 379/530 (71%), Gaps = 38/530 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+S E +RA R++KV L+ GL PYAY+W T A QLQE Y LA GEE ++E V+
Sbjct: 13 SSTLEEIRAARLEKVAGLQKAGLNPYAYQWKSTAHAQQLQEQYADLAPGEEISTE---VA 69
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILG 169
+AGR++ARR GKLAF L+D++GTIQLY +K+R+ + + F+ + D GDILG
Sbjct: 70 IAGRIIARRIMGKLAFFNLQDETGTIQLYLDKKRISETMSAVPNAFNTVIKLTDTGDILG 129
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
G++KRTE+GELS+ VN + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PEV
Sbjct: 130 AKGTIKRTERGELSIYVNEYEILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQT 189
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELH
Sbjct: 190 FRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELH 249
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+ + A
Sbjct: 250 LKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVNAAQ 309
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G L I YQ EI L PWRR TMH LV+E TG+D N D + A+
Sbjct: 310 DVLGTLKITYQDREIDLTPPWRRVTMHELVQEITGVDLNSF-EDFESARIAA-------- 360
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
EN V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPHR L ERF
Sbjct: 361 ENAGIGVPEDCKTIGKLLNEAFEQKVEETLIQPTFVLDFPVEISPLAKPHRSKTDLVERF 420
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
EL++ GRE+AN+FSELTDP+DQR RLE Q K+A+ E
Sbjct: 421 ELYVVGRELANSFSELTDPIDQRQRLEAQAL----KKASGDLEAQG-------------- 462
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 --VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|425446594|ref|ZP_18826597.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
gi|389733098|emb|CCI03081.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
Length = 573
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 298/530 (56%), Positives = 378/530 (71%), Gaps = 38/530 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+S E +RA R++KV L+ GL PYAY+W T A QLQE Y LA GEE ++E V+
Sbjct: 13 SSTLEEIRAARLEKVAGLQKAGLNPYAYQWKSTAHAQQLQEQYADLAPGEEISTE---VA 69
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILG 169
+AGR++ARR GKLAF L+D++GTIQLY +K+R+ + + F+ + D GDILG
Sbjct: 70 IAGRIIARRIMGKLAFFNLQDETGTIQLYLDKKRISETMAAVPNAFNTVIKLTDTGDILG 129
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
G++KRTE+GELS+ VN + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PEV
Sbjct: 130 AKGTIKRTERGELSIYVNEYEILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQT 189
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELH
Sbjct: 190 FRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELH 249
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+ A
Sbjct: 250 LKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVKAAQ 309
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G L I YQ EI L PWRR TMH LV+E TG+D N D + A+
Sbjct: 310 DVLGTLKITYQDREIDLTPPWRRVTMHELVQEITGVDLNSF-EDFESARIAA-------- 360
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
EN V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPHR L ERF
Sbjct: 361 ENAGIGVPEDCKTIGKLLNEAFEQKVEETLIQPTFVLDFPVEISPLAKPHRSKTDLVERF 420
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
EL++ GRE+AN+FSELTDP+DQR RLE Q K+A+ E
Sbjct: 421 ELYVVGRELANSFSELTDPIDQRQRLEAQAL----KKASGDLEAQG-------------- 462
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 --VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|428227062|ref|YP_007111159.1| lysyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
gi|427986963|gb|AFY68107.1| lysyl-tRNA synthetase, class II [Geitlerinema sp. PCC 7407]
Length = 520
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 298/527 (56%), Positives = 379/527 (71%), Gaps = 37/527 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S + +RA R++KVE+L+ G PYAY+W+ TH A LQE Y L NGE + E V++
Sbjct: 14 STLDEIRATRLEKVEQLKQLGFNPYAYRWESTHQAATLQEKYADLPNGE--SVEGVEVAI 71
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ------FDQLKVFVDIGDILGV 170
AGR++ARR FGKLAF L+D++G+IQLY +K+ + + FD LK D+GDI+GV
Sbjct: 72 AGRIMARRVFGKLAFFGLQDETGSIQLYLDKKAIEAGMPDTEKAFDHLKNLTDVGDIIGV 131
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G ++RT+KGELSV V ++ ILTKSL PLPDK+HGLTD+ KRYRQRYVD+I PEV + F
Sbjct: 132 RGGLRRTDKGELSVAVTTYTILTKSLQPLPDKWHGLTDISKRYRQRYVDLIVNPEVRETF 191
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+RA I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELHL
Sbjct: 192 RRRALITAGIRRYLDQQGFIEIETPVLQAEAGGADARPFITYHNTLEMELYLRIATELHL 251
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE ++ A
Sbjct: 252 KRLIVGGFEKVFEMGRIFRNEGISTRHNPEFTSIEVYQAYADYDDMMALTENLIATVAQE 311
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G L I YQG + L PWR+ TMH++VKE TG+DF++ DL E A GL
Sbjct: 312 VIGTLEITYQGQSVNLTPPWRQVTMHDIVKEFTGLDFSQF-TDL---DEAKAAAKAAGLT 367
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
I+ PS+G LLNE FE VE LVQPTFV+DYP+EISPLAKPHR GL ERFE
Sbjct: 368 Q-----IDDCPSLGKLLNEAFEQKVEENLVQPTFVIDYPVEISPLAKPHRSKPGLVERFE 422
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LF+ GRE AN+FSELTDP+DQR RLEEQ ++AA E
Sbjct: 423 LFMVGRETANSFSELTDPIDQRQRLEEQA----ARKAAGDLEAQG--------------- 463
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE+GMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 464 -VDEDFLLALEHGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 509
>gi|166365564|ref|YP_001657837.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|425465858|ref|ZP_18845164.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
gi|166087937|dbj|BAG02645.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|389831827|emb|CCI25085.1| Lysyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
Length = 573
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 298/530 (56%), Positives = 378/530 (71%), Gaps = 38/530 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+S E +R R++KV L+ GL PYAY+W T A QLQE Y LA GEE ++E V+
Sbjct: 13 SSTLEEIRDARLEKVAGLQKAGLNPYAYQWKSTAHAQQLQEQYADLAPGEEISAE---VA 69
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILG 169
+AGR++ARR GKLAF L+D++GTIQLY +K+R+ + + F+ + D GDILG
Sbjct: 70 IAGRIIARRILGKLAFFNLQDETGTIQLYLDKKRISETMAAVPNAFNTVIKLTDTGDILG 129
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
G++KRTE+GELS+ VN + ILTKSLLPLPDK+HGLTDV+KRYRQRYVD+I PEV
Sbjct: 130 AKGTIKRTERGELSIYVNEYEILTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQT 189
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+RA+I + IR+ ++ GF+E+ETPVLQ AGGA+ARPF+TYHN+L +LYLRIATELH
Sbjct: 190 FRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELH 249
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GGFEK++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+ + A
Sbjct: 250 LKRLIVGGFEKVFELGRIFRNEGVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVNAAQ 309
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G L I YQ EI L PWRR TMH LV+E TG+D N D + A+
Sbjct: 310 DVLGTLKITYQDREIDLTPPWRRVTMHELVQEITGVDLNSF-EDFESARIAA-------- 360
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
EN V E ++G LLNE FE VE L+QPTFVLD+P+EISPLAKPHR L ERF
Sbjct: 361 ENAGIGVPEDCKTIGKLLNEAFEQKVEETLIQPTFVLDFPVEISPLAKPHRSKTDLVERF 420
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
EL++ GRE+AN+FSELTDP+DQR RLE Q K+AA E
Sbjct: 421 ELYVVGRELANSFSELTDPIDQRQRLEAQAL----KKAAGDLEAQG-------------- 462
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+SASIRDVIAFP+LK Q
Sbjct: 463 --VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKSQ 510
>gi|443321180|ref|ZP_21050242.1| lysyl-tRNA synthetase (class II) [Gloeocapsa sp. PCC 73106]
gi|442789098|gb|ELR98769.1| lysyl-tRNA synthetase (class II) [Gloeocapsa sp. PCC 73106]
Length = 573
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/533 (55%), Positives = 383/533 (71%), Gaps = 38/533 (7%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
+ +TS E +RA R++KV++L+ GL PYAY W TH +LQE Y L+ GEE +++
Sbjct: 10 TQNTSSLEEIRATRLEKVQQLQDLGLNPYAYHWKSTHHNAELQETYADLSPGEEIDTQ-- 67
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS------DQFDQLKVFVDIGD 166
V+VAGR++ARR FGKLAF +L+D++GTIQLY EK R+ + F+Q+K D GD
Sbjct: 68 -VAVAGRIIARRVFGKLAFFSLQDETGTIQLYLEKNRIEAFMSEPPKAFEQIKKLTDTGD 126
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
ILGV G++K+TEKGELS+ V + ILTKSLLPLPDK+HGLTD +KRYRQRYVD+I P+V
Sbjct: 127 ILGVKGTIKKTEKGELSIYVQEYAILTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNPQV 186
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
FR+RA+I + IR+ +E+ F+E+ETPVLQ AGGA+ARPF+TYHN+L DLYLRIAT
Sbjct: 187 RQTFRRRAQITAAIRRYLEAKDFLEIETPVLQSEAGGADARPFITYHNTLEMDLYLRIAT 246
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE++++
Sbjct: 247 ELHLKRLIVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYADYYDMMALTEDLIST 306
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A V GKL I YQ I L PW + TM LV+E T +DF + +D AK + A+G
Sbjct: 307 IAQEVLGKLAITYQEQLIDLTPPWSKITMQELVREKTNLDFTQF-DDFNTAK-VAVEAIG 364
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
+ N S+G LLN VFE VE L+QPTFVLD+P+EISPLAKPHR GL
Sbjct: 365 INIPN-------DCTSLGKLLNLVFEEKVEATLIQPTFVLDFPLEISPLAKPHRSKLGLV 417
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
ERFEL+ GRE+AN+FSELTDP+DQR RLE Q K+A E +
Sbjct: 418 ERFELYAVGRELANSFSELTDPIDQRQRLEAQA----AKKALGDVEAND----------- 462
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+S SIRDVIAFP+LK Q
Sbjct: 463 -----VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSPSIRDVIAFPLLKSQ 510
>gi|170076670|ref|YP_001733308.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
gi|169884339|gb|ACA98052.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 538
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/532 (55%), Positives = 385/532 (72%), Gaps = 38/532 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +S S + +RA R++KV++L++ + PYAYKW+ +H +LQE Y+ + GEE
Sbjct: 2 SESSHSSLDDIRATRLEKVDQLKAIAMNPYAYKWEISHHTAELQEKYKDIEAGEEVE--- 58
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIG 165
D VS+AGR++ARR FGKLAF +L+D++GTIQLY +K+ + L F+ LK D+G
Sbjct: 59 DTVSIAGRILARRVFGKLAFFSLQDETGTIQLYLDKKLINGGMPDLEGAFNHLKKLTDVG 118
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
DI+GV G +KRTEKGELS+ V+ F +LTKSLLPLPDK+HGLTD++KRYRQRYVD+I P+
Sbjct: 119 DIIGVKGIIKRTEKGELSIKVSQFAMLTKSLLPLPDKWHGLTDIEKRYRQRYVDLIINPQ 178
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V + FR+RAKI + IR+ +E F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIA
Sbjct: 179 VKETFRRRAKITAAIRRYLEDRDFLEIETPVLQAEAGGAEARPFITHHNTLDMPLYLRIA 238
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
TELHLKR+++GGFE+++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY DY MM++TE+++
Sbjct: 239 TELHLKRLVVGGFERVFELGRIFRNEGVSTKHNPEFTSIEVYQAYGDYFDMMDLTEDLIR 298
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL 405
A + G+ + Y V + + PWRRETM NLV+EATGI+F +DL AK+
Sbjct: 299 TLAKDIVGQAQLPYGEVIVDVGTPWRRETMQNLVQEATGINFLSF-DDLNAAKQAA---- 353
Query: 406 GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
E+ + E ++G LLNE FE VE L+QPTFV +YP+E+SPLAKPHR GL
Sbjct: 354 ----ESVGMHIPEKCKTIGQLLNEAFEQKVEATLIQPTFVTEYPVEVSPLAKPHRDKPGL 409
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
TERFELFI GRE+AN FSELTDP+DQR RLEEQ K+AA E
Sbjct: 410 TERFELFIVGRELANGFSELTDPVDQRQRLEEQA----AKKAAGDEEACD---------- 455
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DFVTALEYGMPP G+G+GIDRLVMLLTN+ SIRDVIAFP+LK
Sbjct: 456 ------VDEDFVTALEYGMPPTVGLGIGIDRLVMLLTNAESIRDVIAFPLLK 501
>gi|427722483|ref|YP_007069760.1| lysyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
gi|427354203|gb|AFY36926.1| Lysyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
Length = 511
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/534 (55%), Positives = 383/534 (71%), Gaps = 38/534 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +S+S R+ +RA R++KV++L++ + PYAYKW+ +H +LQ+ Y+ +A GEE
Sbjct: 2 SDSSSSTRDELRAARLEKVQQLQAIAMNPYAYKWEVSHHTAELQDKYKDIAAGEEVE--- 58
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIG 165
DHVS+AGR++ARR FGKLAF +L+D++GTIQLY +K+ + F+ LK D+G
Sbjct: 59 DHVSIAGRILARRVFGKLAFFSLQDETGTIQLYLDKKLINAGMPDFEGAFNHLKKLTDVG 118
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
DI+GV G +KRTEKGELSV V+ F +LTKSLLPLPDK+HGLTD++KRYRQRYVD+I P
Sbjct: 119 DIIGVKGIIKRTEKGELSVKVSEFAMLTKSLLPLPDKWHGLTDIEKRYRQRYVDLIINPA 178
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V + FR RAKI + IR+ +E F+E+ETPVLQG AGGAEARPF+T+HN+L LYLRIA
Sbjct: 179 VRETFRCRAKITAAIRRYLEDKDFLEIETPVLQGEAGGAEARPFITHHNTLDMPLYLRIA 238
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
TELHLKR+++GGFE+++E+GRIFRNEG+ST+HNPEFT+IE+Y+AY DY MM++TE+++
Sbjct: 239 TELHLKRLVVGGFERVFEMGRIFRNEGVSTKHNPEFTSIEVYQAYGDYHDMMDLTEDLIR 298
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL 405
A + G + + Y + + WRRETM NLVK+ATG+DF +D A +
Sbjct: 299 TLAKDIIGTVKLPYGEAIVDVGSAWRRETMQNLVKDATGVDFLAF-DDFDTAVKAA---- 353
Query: 406 GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
E+ V E S+G LLNE FE VE L+QPTFV +YP+E+SPLAKPHR GL
Sbjct: 354 ----EDAGVGVPEKVNSIGQLLNEAFEQKVEETLIQPTFVTEYPVEVSPLAKPHRDKPGL 409
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
TERFELF+ GRE+AN FSELTDP+DQR RLE Q K+AA E
Sbjct: 410 TERFELFVVGRELANGFSELTDPIDQRERLEAQA----AKKAAGDVEACD---------- 455
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DFVTALEYGMPP G+G+GIDRLVMLLTNS SIRDVIAFP+LK Q
Sbjct: 456 ------VDEDFVTALEYGMPPTVGLGIGIDRLVMLLTNSESIRDVIAFPLLKTQ 503
>gi|443318365|ref|ZP_21047619.1| lysyl-tRNA synthetase (class II) [Leptolyngbya sp. PCC 6406]
gi|442782027|gb|ELR92113.1| lysyl-tRNA synthetase (class II) [Leptolyngbya sp. PCC 6406]
Length = 518
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 299/522 (57%), Positives = 373/522 (71%), Gaps = 38/522 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R+ R++KV +L++ G+ P+AY+WD TH A LQ Y L GEE + V++AGR++
Sbjct: 19 LRSARLQKVTQLQAAGINPFAYRWDTTHHAADLQSKYADLPAGEEVE---EQVAIAGRIL 75
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSDQ---FDQLKVFVDIGDILGVSGSMK 175
ARR FGKLAF L+D++GTIQLY +K+ + +SDQ F LK D+GDI+GV G++K
Sbjct: 76 ARRVFGKLAFFNLQDETGTIQLYLDKKDIQAGMSDQPDAFTHLKQLTDVGDIIGVKGTLK 135
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RT+KGELSV V + +LTK+LLPLPDK+HGLTDV KRYRQRYVD+I P V + FRKRA
Sbjct: 136 RTDKGELSVKVQEYALLTKALLPLPDKWHGLTDVAKRYRQRYVDLIVNPPVRETFRKRAL 195
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I S IR+ E GF+E+ETPVLQG AGGAEARPFVTYHN+L LYLRIATELHLKR+L+
Sbjct: 196 ITSAIRRYFEERGFLEIETPVLQGEAGGAEARPFVTYHNTLDMPLYLRIATELHLKRLLV 255
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFEK++EIGRIFRNEG+STRHNPEFT+IE Y+AY+DY M +TE+++ +V G
Sbjct: 256 GGFEKVFEIGRIFRNEGVSTRHNPEFTSIEFYQAYADYHDFMALTEDLIASITQSVLGTT 315
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I YQG EI L PWRR TMHNLV+E TG+DF + DL AK + LG
Sbjct: 316 RITYQGTEIDLTPPWRRVTMHNLVQEHTGLDFTQF-PDLDAAK-AAVAELG-------IT 366
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
V + S+G LLNEVFE +E L+QPTF++D+P+EISPL+KPHR G+ ERFELFI G
Sbjct: 367 VADGCDSIGRLLNEVFEHRIETTLIQPTFLMDHPVEISPLSKPHRSKPGVVERFELFIAG 426
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE AN FSELTDPLDQR R E Q ++AA E + +D+D
Sbjct: 427 RETANGFSELTDPLDQRDRFEAQA----ARKAAGDLEATG----------------VDED 466
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+TALEYGMPP G G+GIDRL+MLLT+S SIRDVIAFP+LK
Sbjct: 467 FLTALEYGMPPTCGEGIGIDRLIMLLTDSPSIRDVIAFPLLK 508
>gi|284929667|ref|YP_003422189.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
gi|284810111|gb|ADB95808.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
Length = 514
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/529 (55%), Positives = 382/529 (72%), Gaps = 38/529 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S + +RA R+ KVEEL+ GL PYAY+W TH+A LQ+ Y L GEE + E VS+
Sbjct: 14 SGLQEIRATRLAKVEELKKLGLVPYAYQWKSTHNAAHLQKTYVDLGEGEELDKE---VSL 70
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDIGDILGV 170
AGR++ARR FGKLAF TL+D++G IQLY +K+ + + + F+ LK +D GDI+GV
Sbjct: 71 AGRIMARRVFGKLAFFTLQDETGNIQLYLDKKIIQDNMSNIENPFNHLKKLIDTGDIIGV 130
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
+GS+K+TEKGELS+ V ++ ILTKSLLPLPDK+HGLTD +KRYRQRY+D+I P + F
Sbjct: 131 TGSIKKTEKGELSIKVKTYEILTKSLLPLPDKWHGLTDREKRYRQRYIDLIVNPSTRETF 190
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R R+K++S IRK +E GF+E+ETPVLQ AGGA+ARPF+T+HN+L DLYLRIATELHL
Sbjct: 191 RCRSKVISSIRKFLEERGFLEIETPVLQSEAGGADARPFITHHNTLNMDLYLRIATELHL 250
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GGFEK++EIGRIFRNEG+ST+HNPEFT+IE+YEAYSDY MM +TE+I+T
Sbjct: 251 KRLIVGGFEKVFEIGRIFRNEGISTKHNPEFTSIEIYEAYSDYYGMMELTEKIITRIIHD 310
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
+ I+ QG +I +PWR+ TM+ +VKE +DF K +E + G++
Sbjct: 311 IGQDTIIECQGQKINFSQPWRKITMNEIVKEKNNLDF----ESFKTFEEAKIAVNKLGIQ 366
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ E+ ++G LLNEVFE VE ++QPTF+LD+P+EISPLAKPHR + ERFE
Sbjct: 367 -----IPEACRTIGKLLNEVFEQTVEETIIQPTFILDFPVEISPLAKPHRTKGNVVERFE 421
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L+I GRE+AN+FSELTDP+DQR RLE+Q K+AA E +
Sbjct: 422 LYIMGRELANSFSELTDPIDQRERLEKQAI----KKAAGDLEAHN--------------- 462
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+D+DF+TALEYGMPP G+G+GIDRL+MLLTNSASIRDVIAFP+LK Q
Sbjct: 463 -IDEDFLTALEYGMPPTGGLGIGIDRLIMLLTNSASIRDVIAFPLLKNQ 510
>gi|145352203|ref|XP_001420444.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580678|gb|ABO98737.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 607
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/553 (53%), Positives = 400/553 (72%), Gaps = 30/553 (5%)
Query: 41 SAGTRNRR---ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEI 97
AG R R +S TS E V+ALR +K++ L + G + Y++DRT + LQ
Sbjct: 69 GAGNRKRGEGGGRDASGVTSSPEEVKALRAQKLDALGALGQRGFDYRFDRTKYCDALQRE 128
Query: 98 YRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL---LSDQ 154
+ L NG E ++ +V GRV+A+R+FGKLAFL+L D+ G++QL+C+K+RL
Sbjct: 129 HEGLENGVEIEGSSE--AVCGRVMAKRSFGKLAFLSLVDERGSVQLFCDKKRLDETSPGA 186
Query: 155 FDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYR 214
F+ + VD+GDI+GV GS+KR++KGELS++ +LTK+LLPLPDK+HGL DV+KRYR
Sbjct: 187 FEMITELVDVGDIIGVHGSVKRSDKGELSIVPAKVQMLTKALLPLPDKWHGLQDVEKRYR 246
Query: 215 QRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHN 274
QRYVD+I PEV + F+ R+ I+S IR+ ++ GF+E+ETPVL AGGA+A+PF T+HN
Sbjct: 247 QRYVDLIVSPEVRNTFKARSNIISTIRRMLDDDGFLEMETPVLHTQAGGADAKPFNTFHN 306
Query: 275 SLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQ 334
+LG L LRIATELHLKR+++GGFE++YE+GR+FRNEGLSTRHNPEFT+IE+Y+AY+D
Sbjct: 307 ALGMQLTLRIATELHLKRLVVGGFERVYELGRVFRNEGLSTRHNPEFTSIEVYQAYADVT 366
Query: 335 SMMNITEEIVTHCALAVNGKLTIDYQGVEICL-ERPWRRETMHNLVKEATGIDFNELGND 393
M+ +TEE++ CA+ G LTI Y V I L +RPWRR M++LVKEATG+D G+D
Sbjct: 367 DMLELTEEMICRCAMKACGTLTIPYGDVTIDLSQRPWRRAPMNDLVKEATGVDVMAFGDD 426
Query: 394 LKVAKETTLRAL-------GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVL 446
L+ AK + AL G+G++ ++ + SVG++LNE+FE E L+QPTFVL
Sbjct: 427 LEGAKAAAIPALKAHSKKAGEGIKG-----VKLAASVGHVLNEMFEAACESDLIQPTFVL 481
Query: 447 DYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKR 506
D+P+EISPLAKPHR G+TERFELF+ GRE+AN+FSELTDP+DQR RLE Q+ H
Sbjct: 482 DHPLEISPLAKPHRSKPGVTERFELFVVGRELANSFSELTDPIDQRKRLEAQMVTH---- 537
Query: 507 AAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSAS 566
K+SA ++ + + +Y+V +D+DFV ALEYGMPP +GMGLG+DRLVMLLTNS S
Sbjct: 538 -----AKTSAAQREAAAANEAYDVEMDEDFVAALEYGMPPTAGMGLGVDRLVMLLTNSPS 592
Query: 567 IRDVIAFPILKIQ 579
IRDVIAFP+LK Q
Sbjct: 593 IRDVIAFPLLKKQ 605
>gi|307107552|gb|EFN55794.1| hypothetical protein CHLNCDRAFT_57712 [Chlorella variabilis]
Length = 618
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 302/538 (56%), Positives = 393/538 (73%), Gaps = 16/538 (2%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
++ STS E +R LRI+K EELR+ G EPYAY + RTH+A QLQE+ H GE +E
Sbjct: 86 AAPESTSSDEDIRKLRIQKAEELRAAGREPYAYTFPRTHTAAQLQEL--HAGLGEGQVAE 143
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDI 167
V+VAGRV++RR GKLAF L D SG+IQLY E+ L Q F +K VD GDI
Sbjct: 144 GASVAVAGRVMSRRFMGKLAFFKLVDASGSIQLYIERAVLDEAQPEAFAAVKGLVDSGDI 203
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+GV G +KRTEKGELSV V S +LTKSLLPLPDK+HGL+DV++RYR+RY+DMI P V
Sbjct: 204 VGVRGGIKRTEKGELSVTVESLEVLTKSLLPLPDKWHGLSDVEQRYRKRYLDMIVTPGVV 263
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F+ R+K +S +R+ +E F+EVETPVL+ +AGGA+ARPFVTYHN+LGR+ +RIATE
Sbjct: 264 DTFKARSKTISTMRRMLEEQDFLEVETPVLESSAGGADARPFVTYHNALGRNFTMRIATE 323
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GG E+++EIGRIFRNEG+S RHNPEFT+IE+Y+AY+DY MM++TE I+ C
Sbjct: 324 LHLKRLVVGGLERVFEIGRIFRNEGISARHNPEFTSIELYQAYADYSDMMDLTEAIIRTC 383
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A AV G+L + YQG + P+ R TMH+LV++ TG+DF G DL+ A+ L AL
Sbjct: 384 AQAVCGQLQLPYQGQVLDFGAPFCRATMHDLVRDKTGVDFEAFGGDLEAARAAALEAL-- 441
Query: 408 GLENKDKFVIES----SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
++ D + ++ +PSVG++LNEVFE +VE L QPTFVLD+P+EISPLAKPHR
Sbjct: 442 -RQHSDTYAVQQAVLKAPSVGHVLNEVFEGLVEADLQQPTFVLDHPVEISPLAKPHRSRK 500
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARL----EEQVRQHNEKRAAAVSEKSSAQEK 519
G+ ERFELF+ GRE+AN+FSELTDP+DQR RL +++AAA + +
Sbjct: 501 GVVERFELFVVGRELANSFSELTDPVDQRQRLEAQVAAHQAAVQQQQAAAAVANGAGAAE 560
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ +YEV LD+DF+ ALEYGMPP GMG+GIDRLVMLLT+S SIRDVIAFP++K
Sbjct: 561 AASGEEEAYEVVLDEDFLAALEYGMPPTGGMGMGIDRLVMLLTDSPSIRDVIAFPLMK 618
>gi|428298231|ref|YP_007136537.1| lysyl-tRNA synthetase [Calothrix sp. PCC 6303]
gi|428234775|gb|AFZ00565.1| Lysyl-tRNA synthetase [Calothrix sp. PCC 6303]
Length = 511
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/525 (55%), Positives = 367/525 (69%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++K E+L+ G+ PYAY+W+ TH QLQ + L + EE N + V++AGR
Sbjct: 4 EDIRATRLEKAEQLKQLGMNPYAYRWEITHHTEQLQAQFVDLPSSEEVNID---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKE-------RLLSDQFDQLKVFVDIGDILGVSG 172
++ RR GKLAF TL+D++G IQLY +K+ ++ + F L +DIGDILGV G
Sbjct: 61 IMTRRFMGKLAFATLQDETGKIQLYLDKQAVDDGMGEIIPNAFKSLDKLMDIGDILGVKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRT+KGELSV V F ILTKSLLPLPDK+HGLTDV KRYRQRY+D+I PEV FR+
Sbjct: 121 TIKRTQKGELSVYVKEFAILTKSLLPLPDKWHGLTDVAKRYRQRYIDLIVNPEVQQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAKI + IR+ +E F+E+ETPVLQ AGGA+ARPFVTYHN+L LYLRIATELHLKR
Sbjct: 181 RAKITAGIRRYLEERDFLEIETPVLQAEAGGADARPFVTYHNTLDIQLYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MMN+TE I+T A V
Sbjct: 241 LIVGGFEKVFEMGRIFRNEGISTRHNPEFTSIEIYQAYADYDDMMNLTEGIITTVAQDVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQG +I L PWRR TMH+LVK+ATG+DF +E G+ +
Sbjct: 301 GTLKINYQGQDIDLTPPWRRVTMHDLVKDATGLDFTTFST----VEEAKTACKNAGIPDV 356
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
D+ S+G LL FE VE L+QPTFV+DYP+E SPLAKPHR GL ERFELF
Sbjct: 357 DEHT-----SIGKLLVLAFEEKVETTLIQPTFVIDYPVENSPLAKPHRSKPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE N+FSELTDP+DQR RLE Q + E A +
Sbjct: 412 IVGRETGNSFSELTDPIDQRQRLEAQAARKAEGDLEAQG--------------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+ ASI+D IAFP+LK
Sbjct: 452 DEDFITALEYGMPPTGGLGIGIDRLVMLLTDCASIKDAIAFPLLK 496
>gi|303284285|ref|XP_003061433.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456763|gb|EEH54063.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 521
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 299/537 (55%), Positives = 392/537 (72%), Gaps = 34/537 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E VRA+RI+K++ L + + P+AY++DRTH+A QLQ ++ + NG E D +V GR
Sbjct: 3 EEVRAIRIEKIDALTAADMTPFAYRFDRTHTATQLQAMHASVENGVEVEGVTD--AVCGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKR 176
V ARR FGKLAFL++ DD G IQLY + +R+ + F ++ D+GDI+G G++KR
Sbjct: 61 VKARRVFGKLAFLSIEDDGGAIQLYLDVKRVDAKNPGTFKRIVDLCDMGDIVGARGTVKR 120
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
TEKGELS++V+ F +LTKSLLPLPDK+ GLTDV+ RYRQRY+D+I+ PEV DVFR RA I
Sbjct: 121 TEKGELSIVVDEFEMLTKSLLPLPDKFKGLTDVETRYRQRYLDLIASPEVRDVFRTRAGI 180
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
VS IR+ ++ F+E+ETPVL+ AGGA+A+PF T+HN+LG DL LRIATELHLKR+++G
Sbjct: 181 VSGIRRFLDDRAFMEMETPVLESRAGGADAKPFSTFHNALGMDLTLRIATELHLKRLVVG 240
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA-----V 351
GFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+D M+ +TE+++ CA A
Sbjct: 241 GFERVYEMGRIFRNEGISTRHNPEFTSVEVYQAYADVSDMLELTEDMI--CAAAERACPG 298
Query: 352 NGKLTIDYQGVEICL-ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
N L+I Y I L +RPWRRE+M++LVKE TG E L +G E
Sbjct: 299 NENLSIPYGDEIIHLGKRPWRRESMNDLVKEYTG--------------ECALDIMGTFGE 344
Query: 411 NKDKFV------IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
KD ++ SP+VG++LNE+FE VE KL QPTFVLD+P+EISPLAKPHR G
Sbjct: 345 TKDAQSLAGIPNVQKSPTVGHVLNEMFEACVETKLRQPTFVLDHPVEISPLAKPHRSKPG 404
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQH-NEKRAAAVSEKSSAQEKLKES 523
+TERFELFI GRE+AN+FSELTDP+DQR RLE Q+ H + A + ++ +E L+
Sbjct: 405 VTERFELFIVGRELANSFSELTDPVDQRKRLEGQIATHAKARSEARAAAEAQGKEALRAF 464
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+D Y + LD+DFVTALEYGMPP GMGLG+DRLVMLLTNSASIRDVIAFP+LK Q+
Sbjct: 465 EDDDYPIELDEDFVTALEYGMPPTGGMGLGVDRLVMLLTNSASIRDVIAFPLLKKQE 521
>gi|428165572|gb|EKX34564.1| lysyl-tRNA synthetase [Guillardia theta CCMP2712]
Length = 479
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/511 (55%), Positives = 373/511 (72%), Gaps = 42/511 (8%)
Query: 67 IKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAF 126
+ K E+LR+KG+ PY Y + +HS +QL++++ L NGE ++N VS+AGRV+A+R F
Sbjct: 1 MGKAEKLRAKGINPYEYSFQVSHSTDQLKDMHAILGNGE--TADNAQVSIAGRVMAKRVF 58
Query: 127 GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLV 186
GKLAF TL D GTIQLY EK FVD+GD LGVSG +KRT+KGELSV+V
Sbjct: 59 GKLAFYTLSDSVGTIQLYLEK------------TFVDVGDFLGVSGGIKRTDKGELSVVV 106
Query: 187 NSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVES 246
F ILTK++LPLPDKY GLTD++ RYR+RYVD+I PEV + FR+RAKI+ IR +
Sbjct: 107 EKFSILTKAILPLPDKYKGLTDINIRYRRRYVDLIVNPEVRETFRRRAKIIQGIRDYLNQ 166
Query: 247 LGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGR 306
++E+ETP+L GGA+ARPF+T+HN+L +LY+RIATELHLKR+++GG E++YE+GR
Sbjct: 167 REYLEIETPILTAEIGGADARPFITHHNALDMELYMRIATELHLKRLVVGGIERVYELGR 226
Query: 307 IFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICL 366
IFRNEG+STRHNPEFT++E+Y+AY+DY+ MMN+ EE++ A+ V G L +DYQG +I L
Sbjct: 227 IFRNEGVSTRHNPEFTSVELYQAYADYEDMMNLVEEMICGIAMDVCGTLELDYQGEKISL 286
Query: 367 ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNL 426
+RPWRR +M++LVK+ATG+DF L DL+ A+E + + + DK + SVG L
Sbjct: 287 KRPWRRASMNDLVKDATGVDFYSLRGDLEKAREEAKKL---KIPDADK-----AGSVGQL 338
Query: 427 LNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELT 486
LN VFE E L+QPTFV ++P+EISPLAKPHR GLTERFELF+ GRE+ANAFSELT
Sbjct: 339 LNLVFEETAESSLIQPTFVTEHPVEISPLAKPHRSKEGLTERFELFVYGRELANAFSELT 398
Query: 487 DPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPP 546
DP+DQR R E Q K+AA E + +D+DF+ A+EYGMPP
Sbjct: 399 DPVDQRERFELQA----AKKAAGDLEAAD----------------VDEDFLMAIEYGMPP 438
Query: 547 ASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+G+G+GIDRL+MLLTNSASIRDVIAFP+++
Sbjct: 439 TAGLGIGIDRLIMLLTNSASIRDVIAFPLMR 469
>gi|412987900|emb|CCO19296.1| lysyl-tRNA synthetase [Bathycoccus prasinos]
Length = 726
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/536 (55%), Positives = 384/536 (71%), Gaps = 19/536 (3%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRH--LANGEESNSENDHVSVA 117
E VRA+RI+K+ +L++ EP+AY++DRT++A +LQ Y LA G E + V
Sbjct: 189 EEVRAVRIEKMAQLKTSNQEPFAYRFDRTNTAAKLQAAYPDSVLAKGCELEN-GTREKVC 247
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GRV ARR FGKLAF+TL D SGTIQLYC++ R+ +QF+ +K +D+GDI+G G +KRT
Sbjct: 248 GRVTARRVFGKLAFMTLTDASGTIQLYCDESRIDQEQFETIKTLIDVGDIVGCEGPLKRT 307
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
+KGELS++V +LTKSL LPDK+HGL DV+ +YRQRYVD+I+ + D F +R KI+
Sbjct: 308 DKGELSIVVEDVKVLTKSLRNLPDKWHGLQDVEIKYRQRYVDLIASSDSRDTFYQRTKII 367
Query: 238 SEIRKTVES-LGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+R+ +E L F+E+ETP++ +GGA+A+PF T+HN+L DL LRIATELHLKR++IG
Sbjct: 368 KTMRRYLEDELEFMEMETPIMHTVSGGADAKPFNTHHNALNMDLTLRIATELHLKRLVIG 427
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGK 354
GFE++YEIGRIFRNEGLSTRHNPEFT+IE+Y+AY D M+ +TEE++ CA AV + K
Sbjct: 428 GFERVYEIGRIFRNEGLSTRHNPEFTSIELYQAYGDVSDMLELTEEVICRCAAAVSPSKK 487
Query: 355 L-TIDYQGVEICL-ERPWRRETMHNLVKEATGID-FNELGNDLKVAKETTLRALGDGLEN 411
L I Y I L +RPWRR +M++LV EA +D N DL+ AK AL +
Sbjct: 488 LEPIQYGDETIDLTKRPWRRASMNDLVIEACNVDVLNGFDGDLEKAKAACEPALKAHSKQ 547
Query: 412 KDKFV--IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
+ + SP++G LLNE+FE VE L QPTFVLD+PIEISPLAKPHR G+TERF
Sbjct: 548 AGASIPAVRDSPNLGTLLNEMFEATVEGTLRQPTFVLDHPIEISPLAKPHRDKKGVTERF 607
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAV--SEK------SSAQEKLK 521
ELF+ GRE+ANAFSELTDP+DQR R E+Q R H E + AA+ +EK A + LK
Sbjct: 608 ELFVVGRELANAFSELTDPIDQRERFEKQSRAHAETQRAALVRAEKKVERGDKDAGDVLK 667
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E+ D YE +D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDVIAFP LK
Sbjct: 668 ETTDDIYEFPIDEDFINALEYGMPPCGGLGIGVDRLVMLLTNSPSIRDVIAFPTLK 723
>gi|352095294|ref|ZP_08956397.1| Lysyl-tRNA synthetase [Synechococcus sp. WH 8016]
gi|351679305|gb|EHA62447.1| Lysyl-tRNA synthetase [Synechococcus sp. WH 8016]
Length = 489
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 286/517 (55%), Positives = 361/517 (69%), Gaps = 35/517 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L+ +G EPYA ++D T +LQ + L NG E + + VSVAGRV+
Sbjct: 4 LRETRLEKANALKEQGQEPYALRFDLTDRMARLQADHADLPNGTERDLK---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++GTIQL+ EK L D F QL VD GD++GV G ++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKA-TLGDSFAQLSSLVDAGDLIGVHGILRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V+ + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA VS IR
Sbjct: 120 LSVKVSEWQMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRAMAVSAIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+++GGFE++
Sbjct: 180 RWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLPLYLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TEE++ V G I YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEVYQAYADYNDMMTLTEELIASVCEQVCGTTRITYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL-GDGLENKDKFVIESS 420
VE+ L WRR TMH LV+EATG+DF +E + A+ L DK +
Sbjct: 300 VEVDLTPSWRRATMHELVQEATGLDFASFQT-----REAAVEAMRAANLPAPDK-----A 349
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+VG LLNE FE VEP L+QPTFVLDYP EISPLA+ HR GL ERFELFI GRE AN
Sbjct: 350 DTVGRLLNEAFEHAVEPNLIQPTFVLDYPQEISPLARKHRSKPGLVERFELFIVGRETAN 409
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSELTDPLDQR R+E Q E+RAA E S +D+DF+ AL
Sbjct: 410 AFSELTDPLDQRGRMELQ----QERRAAGDVEASG----------------VDEDFIQAL 449
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+++
Sbjct: 450 EVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMR 486
>gi|86608981|ref|YP_477743.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557523|gb|ABD02480.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 511
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/531 (54%), Positives = 365/531 (68%), Gaps = 36/531 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S+ +S A RA R++K + LR +G+ PYAY + TH A +LQE + L G E E+
Sbjct: 2 STLPSSSEAAQRAARLEKAQHLREQGIPPYAYSFPVTHLAAELQEQFADLEPGGER--ED 59
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ----FDQLKVFVDIGDI 167
V+VAGR+ ARR GKLAF TL+D SGTIQLY +K+RL F L +D+GD
Sbjct: 60 VQVAVAGRIRARRVMGKLAFFTLQDRSGTIQLYLDKKRLTEQMGELAFKNLDKLIDVGDW 119
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
LG G +KRTEKGELSV V+ + +LTK+LLPLPDK+HGL DV+KRYRQRYVD+I PEV
Sbjct: 120 LGAKGCLKRTEKGELSVRVDEYQVLTKALLPLPDKWHGLRDVEKRYRQRYVDLIVNPEVK 179
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
RA+I+ +R+T+E GFVE+ETPVLQ GGAEARPFVT+HN+L DLYLRIATE
Sbjct: 180 QTLLDRAQIIRSLRQTLEERGFVEIETPVLQVIPGGAEARPFVTHHNALDLDLYLRIATE 239
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GG E++YEIGR+FRNEG+STRHNPEFT++E Y+A++DY +MM +TE +V +
Sbjct: 240 LHLKRLVVGGIERVYEIGRVFRNEGISTRHNPEFTSLEAYQAFADYHTMMELTETLVCNA 299
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL-G 406
ALAV G L + YQG I L PWRR TM LV+EATGI F ++ K E L AL
Sbjct: 300 ALAVRGSLQLTYQGEAIDLTPPWRRVTMQELVEEATGI-FIDVE---KGCPEELLPALAA 355
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
G+ + + S G LL + FE E +L QPTFVLDYP+E+ PL KPHR GL
Sbjct: 356 QGIPD-----LSPQDSPGQLLVKAFEHCCESRLRQPTFVLDYPLEVCPLTKPHRSKPGLA 410
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
ERFELFI GRE ANA+SELTDP+DQR RLE AQ LK + D
Sbjct: 411 ERFELFIVGRETANAYSELTDPVDQRQRLE-------------------AQAALKAAGDE 451
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LD+DF+TALEYG+PP G+G+GIDRLVMLL ++ SIRDVIAFP+L+
Sbjct: 452 EAHF-LDEDFLTALEYGLPPTGGLGVGIDRLVMLLCDAPSIRDVIAFPLLR 501
>gi|113955017|ref|YP_729353.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
gi|123132786|sp|Q0IDW9.1|SYK_SYNS3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|113882368|gb|ABI47326.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
Length = 489
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 286/516 (55%), Positives = 362/516 (70%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L+ +G EPYA ++D T +LQ + LA G E + + VSVAGRV+
Sbjct: 4 LRETRLEKANALKEQGQEPYALRFDLTDRMARLQADHADLAKGAERDLK---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++GTIQL+ EK L D F QL VD GD++GV G ++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKA-TLGDSFAQLSSLVDAGDLIGVHGILRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V+ + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA VS IR
Sbjct: 120 LSVKVSKWEMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRAMAVSAIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+++GGFE++
Sbjct: 180 RWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLPLYLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE+++ V G I YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEVYQAYADYNDMMTLTEQLIASVCEQVCGTTRISYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
VE+ L WRR TMH LV+EATG+DF + + A +RA L DK +
Sbjct: 300 VEVDLTPSWRRATMHELVQEATGLDFTSF--ETREAAVEAMRAA--NLPAPDK-----AD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+VG LLNE FE VEP L+QPTFVLDYP EISPLA+ HR GL ERFELFI GRE ANA
Sbjct: 351 TVGRLLNEAFEHAVEPNLIQPTFVLDYPQEISPLARKHRSKPGLVERFELFIVGRETANA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSELTDPLDQR R+E Q E+RAA E S +D+DF+ ALE
Sbjct: 411 FSELTDPLDQRGRMELQ----QERRAAGDVEASG----------------VDEDFIQALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+++
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMR 486
>gi|384254295|gb|EIE27769.1| lysyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
Length = 499
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 282/516 (54%), Positives = 366/516 (70%), Gaps = 29/516 (5%)
Query: 69 KVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGK 128
+ ++LRS G EPYAY ++RTH A L E +R L +GE ++ + V+VAGRV+ARR GK
Sbjct: 2 QAQDLRSAGKEPYAYTYERTHMAAALHEQFRDLPDGEMADLQ---VAVAGRVMARRFMGK 58
Query: 129 LAFLTLRDDSGTIQLYCEKERLLS---DQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
LAF++L DDSG+IQ+Y +K L + D F LK +D GDI+G G MKRTEKGELS++
Sbjct: 59 LAFMSLVDDSGSIQIYLDKAVLDAAEEDTFKSLKGLIDAGDIIGARGGMKRTEKGELSLV 118
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
S +LTKSL PLPDK+HGL D++KRYRQRYVD+I V R RA+++ +R+T+E
Sbjct: 119 AASVQMLTKSLAPLPDKWHGLADIEKRYRQRYVDLIVTEGVKGTLRARARMMGALRRTLE 178
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETPVL+ +AGGA+ARPF T+HN+L + LRIATELHLKR+ +GG E+IYEIG
Sbjct: 179 ARGFLEVETPVLETSAGGADARPFTTFHNALQQPYVLRIATELHLKRLAVGGMERIYEIG 238
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+STRHNPEFTT+E+Y+AY+DY MM++TE++V A V G + YQG +
Sbjct: 239 RVFRNEGVSTRHNPEFTTLELYQAYADYHDMMDLTEDLVRAAAAEVAGSHAVVYQGQSLD 298
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL----RALGDGLENKDKFVIESSP 421
+RR +MH+LVKE TG+DF GN L+ + TL L K ++ +
Sbjct: 299 FGPAFRRASMHDLVKEITGLDFAAFGN-LEDGRSATLAFKETNPASSLTIK---AVKGAS 354
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S+G LLNEVFE VE LVQPTFV+D+P+EISPLAKPHR GL ERFELFI GRE+ANA
Sbjct: 355 SLGVLLNEVFEAEVEQHLVQPTFVIDHPVEISPLAKPHRAKPGLVERFELFIYGRELANA 414
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SELTDP+DQR RLE Q+ + + AA+ + V LD+DF+ ALE
Sbjct: 415 YSELTDPVDQRQRLEAQLTERAARAAASGQPRG---------------VVLDEDFIRALE 459
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP GMG+G+DRL MLLT+S SIRDVIAFP+LK
Sbjct: 460 YGLPPTGGMGMGLDRLCMLLTDSPSIRDVIAFPLLK 495
>gi|86605053|ref|YP_473816.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
gi|86553595|gb|ABC98553.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
Length = 508
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 288/531 (54%), Positives = 361/531 (67%), Gaps = 36/531 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S+ +S A RA R++K L+ +G+ PYAY + TH A +LQ + L G E E+
Sbjct: 2 STLPSSSEAAQRAARLEKARHLQEQGILPYAYSFPVTHLAAELQAQFADLEPGAER--ED 59
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ----FDQLKVFVDIGDI 167
V+VAGR+ ARR GKLAF TL+D SGTIQLY EK+RL F L +D+GD
Sbjct: 60 VQVAVAGRIRARRVMGKLAFFTLQDRSGTIQLYLEKQRLTQHMGELAFKNLDKLLDVGDW 119
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
LG G +KRTEKGELSV V+ + +LTK+LLPLPDK+HGL DV+KRYRQRYVD+I PEV
Sbjct: 120 LGAKGCLKRTEKGELSVRVDEYQVLTKALLPLPDKWHGLRDVEKRYRQRYVDLIVNPEVK 179
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
RAKIV +R+T+E GFVE+ETPVLQ GGAEARPF+T+HN+L DLYLRIATE
Sbjct: 180 QTLLDRAKIVRSLRQTLEERGFVEIETPVLQVIPGGAEARPFITHHNALDLDLYLRIATE 239
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GG E++YEIGR+FRNEG+STRHNPEFT++E Y+A++DY +MM +TE +V +
Sbjct: 240 LHLKRLVVGGIERVYEIGRVFRNEGISTRHNPEFTSLEAYQAFADYHTMMELTEALVCNA 299
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFN-ELGNDLKVAKETTLRALG 406
ALAV G L I YQG I L PWRR T+ LV+EATGI + E G+ ++ + +
Sbjct: 300 ALAVRGSLQITYQGETIDLTPPWRRVTIQELVEEATGIFIDVEKGSTAELLPALAQQGIP 359
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
D + S G LL + FE E +L QPTFVLDYP+E+ PL KPHR GL
Sbjct: 360 D---------LSPHDSPGKLLVKAFEHCCESRLRQPTFVLDYPLEVCPLTKPHRSKPGLA 410
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
ERFELFI GRE ANA+SELTDP+DQR RLE AQ LK + D
Sbjct: 411 ERFELFIVGRETANAYSELTDPVDQRQRLE-------------------AQAALKAAGDE 451
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LD+DF+TALEYG+PP G+G+GIDRL MLL ++ASIRDVIAFP+L+
Sbjct: 452 EAHF-LDEDFLTALEYGLPPTGGLGIGIDRLAMLLCDAASIRDVIAFPLLR 501
>gi|33862420|ref|NP_893980.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
gi|39932063|sp|Q7U3A4.1|SYK_PROMM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33640533|emb|CAE20322.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 508
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 287/524 (54%), Positives = 360/524 (68%), Gaps = 40/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L+ G PYA +++ +HS LQ + LA GEE VSVAGRV+
Sbjct: 12 LRETRLEKAQALKELGNGPYALRFESSHSTANLQADHADLAKGEERLLT---VSVAGRVM 68
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK--------ERLLSDQFDQLKVFVDIGDILGVSGS 173
RR GKLAF TL D++GTIQLY EK L S F QL VD GD +GV+G
Sbjct: 69 TRRVMGKLAFYTLADETGTIQLYLEKATIDAAASNELASGTFVQLTTLVDAGDWIGVTGV 128
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELSV V + IL+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+R
Sbjct: 129 LRRTDRGELSVKVQQWQILSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRR 188
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A +VS IR+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+
Sbjct: 189 ALMVSAIRRWLDDRAFLEIETPVLQAEAGGAEARPFITHHNTLDLPLYLRIATELHLKRL 248
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE++++ + G
Sbjct: 249 VVGGFERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYADYIDMMVLTEQLISSVCTQICG 308
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQG+EI L PWRR +MH LV+EATG+DF DL VA R GLE
Sbjct: 309 STRITYQGIEIDLTPPWRRASMHELVQEATGLDFMGF-KDLAVAASAMARV---GLEVPS 364
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
K + SVG LLNE FE VE L+QPTFVLDYPIEISPLA+ HR GL ERFELFI
Sbjct: 365 K-----ADSVGRLLNEAFEQAVEVSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFI 419
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DPLDQR RLE Q Q + + D ++ V D
Sbjct: 420 VGRETANAFSELIDPLDQRQRLEAQ------------------QARRQAGDLEAHGV--D 459
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVML T+S SIRDVIAFP+L+
Sbjct: 460 EDFLQALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIAFPLLR 503
>gi|87123221|ref|ZP_01079072.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
[Synechococcus sp. RS9917]
gi|86168941|gb|EAQ70197.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
[Synechococcus sp. RS9917]
Length = 501
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 288/517 (55%), Positives = 360/517 (69%), Gaps = 30/517 (5%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K LR G EPYA +++ +H QLQ + LANGEE E V+VAGRV+
Sbjct: 4 LRDTRLEKANALRELGREPYALRFEPSHRTAQLQADHADLANGEERQLE---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D SG IQL+ EK L D F QL VD GD +GV G ++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADASGPIQLFLEKASL-GDAFAQLTSLVDAGDWIGVRGILRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V + +LTK+L PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA +VS IR
Sbjct: 120 LSVKVAEWQMLTKALQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+++GGFE++
Sbjct: 180 RWLDDRDFLEIETPVLQAEAGGAEARPFITHHNTLDLPLYLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MMN+TE+++ + G I YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEVYQAYADYVDMMNLTEQLIASVTEQICGTTRITYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNEL-GNDLKVAKETTLRALGDGLENKDKFVIESS 420
+ L PWRR TMH LV+EATG+DF G GLE V +++
Sbjct: 300 TAVDLTPPWRRATMHELVQEATGLDFTAFTGPGAAGRDAAAAAMAAAGLE-----VPDAA 354
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
SVG LLNE FE VE L+QPTFV+DYPIEISPLA+ HR GL ERFELFI GRE AN
Sbjct: 355 DSVGRLLNEAFEQRVEATLIQPTFVIDYPIEISPLARKHRSKPGLVERFELFIVGRETAN 414
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DPLDQR RLE+Q +RAA DD ++ V D+DF+ AL
Sbjct: 415 AFSELIDPLDQRQRLEDQ----QARRAAG--------------DDEAHGV--DEDFLQAL 454
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+GIDRLVMLLT+SASIRDVIAFP+L+
Sbjct: 455 EVGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLR 491
>gi|116074402|ref|ZP_01471664.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
gi|116069707|gb|EAU75459.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
Length = 497
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 281/519 (54%), Positives = 359/519 (69%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L+ G PYA ++ +H LQE + L NGEE + V+VAGRV+
Sbjct: 4 LRDTRLEKAQALQDLGQGPYALGFEPSHRMAALQEAHADLPNGEERDVP---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++GTIQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITSLVDSGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V+ + +L+KSL PLPDK+HGL DV+KRYRQRY+D++ P+ + FR+RA++VS
Sbjct: 121 RGELSVKVSDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLVVSPDTRETFRRRARLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDERDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE++V V G I
Sbjct: 241 ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVAAVCQEVCGSTKIT 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG E+ L PWRR TMH LV++ATG+DFN + + A T + L V E
Sbjct: 301 YQGTEVDLTPPWRRATMHELVEDATGLDFNGFSSRDEAAAAMTAKGL---------HVPE 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ SVG LLNE FE VE L+QPTFV DYP+EISPLA+PHR GL ERFELFI GRE
Sbjct: 352 LADSVGRLLNEAFEQAVESTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREH 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQR RLE Q ++AA E LD+DFV
Sbjct: 412 ANAFSELIDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVN 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 490
>gi|33864663|ref|NP_896222.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|39932070|sp|Q7U9X5.1|SYK_SYNPX RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33632186|emb|CAE06642.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
Length = 502
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/519 (55%), Positives = 357/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L G PYA ++ TH L E + L NGEE VSVAGRV+
Sbjct: 4 LRDTRLEKCQALSDLGQGPYALNFEPTHRMAALHEAHADLPNGEEREVT---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++GTIQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITGLVDGGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V+ + +LTK+L PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA++VS
Sbjct: 121 RGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLIVSPDSRETFRRRARLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDQRDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE++V+ V G I
Sbjct: 241 ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVSAVCQEVCGSCQIT 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQ EI L PWRR TMH LV+EATG+DFN + A T G GL E
Sbjct: 301 YQDTEIDLSPPWRRATMHELVEEATGLDFNSFSSREAAAVAMT----GKGLHAP-----E 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ SVG LLNE FE VE L+QPTFV DYP+EISPLA+PHR GL ERFELFI GRE
Sbjct: 352 LADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREH 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSELTDP+DQR RLE Q ++AA E LD+DFVT
Sbjct: 412 ANAFSELTDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVT 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 490
>gi|260434775|ref|ZP_05788745.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
gi|260412649|gb|EEX05945.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
Length = 502
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 284/519 (54%), Positives = 359/519 (69%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L G PYA + +H LQE + L GEE + VSVAGRV+
Sbjct: 4 LRDTRLEKAKTLEELGQGPYALTFCPSHRMAGLQETHADLPKGEERDVS---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++G+IQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGSIQLFLEKAGLEAQQAGWFKQITSLVDSGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V+ + +LTK+L PLPDK+HGL DV+KRYRQRY+D++ P+ + FR+RA++VS
Sbjct: 121 RGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLVVSPDSRETFRRRARLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDQRDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE++V+ V G TI
Sbjct: 241 ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVSAVCQEVCGTTTIT 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG EI L PWRR TMH LV++ATG+DFN + A T + L V E
Sbjct: 301 YQGTEIDLAPPWRRATMHELVQDATGLDFNSFSSREAAAAAMTAKGL---------HVPE 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ SVG LLNE FE VE L+QPTFV DYP+EISPLA+PHR GL ERFELFI GRE
Sbjct: 352 LADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREH 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSELTDP+DQR RLE Q ++AA E LD+DFVT
Sbjct: 412 ANAFSELTDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVT 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 490
>gi|72383033|ref|YP_292388.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002883|gb|AAZ58685.1| lysyl-tRNA synthetase, class-2 [Prochlorococcus marinus str.
NATL2A]
Length = 513
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/524 (53%), Positives = 366/524 (69%), Gaps = 39/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L++ G PY + T SA LQ Y+ L NGEE + D VS+AGRV
Sbjct: 11 LRDTRLEKAKALKTLGKGPYGLNFRPTDSAAVLQGKYKDLPNGEE---KKDEVSIAGRVT 67
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERL--------LSDQFDQLKVFVDIGDILGVSGS 173
+RR GKLAF TL D++G IQL+ EK L + F+ + VD GD +GVSG
Sbjct: 68 SRRVMGKLAFFTLSDETGIIQLFLEKATLNRNEDSENPKNNFENITSLVDSGDWIGVSGI 127
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELS+ V + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ FR R
Sbjct: 128 LRRTDRGELSIKVFEWSMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVNPQSRKTFRTR 187
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A +VS IR+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+
Sbjct: 188 ALLVSSIRRWLDEKDFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRL 247
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGF+++YE+GRIFRNEG+STRHNPEFT++E+YEA++DY MM++TE++++ + G
Sbjct: 248 VVGGFQRVYELGRIFRNEGISTRHNPEFTSVEIYEAFADYFDMMDLTEKLLSSVCEKICG 307
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I+YQ EI L+ PWRR TMH+LVKE TGIDF G+++ AK R +GL+ D
Sbjct: 308 STKINYQEQEIDLQPPWRRATMHDLVKEFTGIDFELFGDNVDDAKAEMSR---EGLQVPD 364
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
K + +VG+LLNE FE VEP+L+QPTFV+DYPIEISPLA+ HR GL ERFELFI
Sbjct: 365 K-----ADTVGSLLNEAFEQAVEPELIQPTFVMDYPIEISPLARKHRTKKGLVERFELFI 419
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DP+DQR RL + Q +K A + +S LD
Sbjct: 420 VGRETANAFSELIDPIDQRERL---LLQQAKKEAGDLEAQS-----------------LD 459
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDR VMLLT+S SIRDVIAFP+L+
Sbjct: 460 EDFINALEVGMPPTGGLGIGIDRFVMLLTDSPSIRDVIAFPLLR 503
>gi|88808214|ref|ZP_01123725.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
gi|88788253|gb|EAR19409.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
Length = 497
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/529 (53%), Positives = 362/529 (68%), Gaps = 36/529 (6%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A ++ S SD +R R++KV LR +G EPYA +D T +LQ + L GEE +
Sbjct: 2 APTAFCSVSD---LRETRLEKVSALRDQGREPYALTFDPTDRMARLQTDHADLPKGEEKD 58
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
V+VAGRV+ RR GKLAF TL D++GTIQL+ EK L + F Q+ VD GD++
Sbjct: 59 CA---VAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKA-ALGEAFAQITSLVDAGDLI 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G+++RT++GELSV V + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ +
Sbjct: 115 GVRGTLRRTDRGELSVKVAEWTMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRE 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
FR+RA VS IR+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATEL
Sbjct: 175 TFRRRALTVSAIRRWLDEREFLEIETPVLQAEAGGADARPFITHHNTLDLPLYLRIATEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY M+++TE ++
Sbjct: 235 HLKRLVVGGFERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYTDYLGMIDLTESMIASIC 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G + YQG EI L PWRR TMH LV+EATG+DF + A+ + L
Sbjct: 295 QQVCGSTRLAYQGTEIDLTPPWRRATMHELVEEATGLDFTTFSDREAAAEAMAAKGLP-- 352
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
V E + SVG LLNE FE VE L QPTFVLDYP EISPLA+ HR GL ER
Sbjct: 353 -------VPEKADSVGRLLNEAFEHAVEANLTQPTFVLDYPEEISPLARKHRSKPGLVER 405
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GRE ANAFSEL DP+DQR RLE Q + R AA E++
Sbjct: 406 FELFIVGRETANAFSELIDPVDQRGRLEAQ-----QARRAAGDEEAQG------------ 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 449 ---VDEDFLQALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 494
>gi|318042860|ref|ZP_07974816.1| lysyl-tRNA synthetase [Synechococcus sp. CB0101]
Length = 502
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 281/522 (53%), Positives = 361/522 (69%), Gaps = 38/522 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L + G PYA ++D +H +LQ + LANGEE + V+VAGRV+
Sbjct: 4 LRETRLEKGKALAALGQGPYALRFDPSHRTAELQAAHADLANGEERDLA---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF------VDIGDILGVSGSMK 175
RR GKLAF TL D++G IQL+ EK L + D + F VD GD++GV G+++
Sbjct: 61 TRRVMGKLAFFTLADETGPIQLFIEKATLAASMPDDPEAFAHITSLVDAGDLIGVQGTLR 120
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RT++GELSV V S+ +L+KSL PLPDK+HGL+DV+KRYRQRY+D+I P+ + FR+RA
Sbjct: 121 RTDRGELSVKVKSWQMLSKSLQPLPDKWHGLSDVEKRYRQRYLDLIVSPDTRETFRRRAL 180
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
VS IR+ ++ GF+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++
Sbjct: 181 AVSAIRRWLDERGFLEIETPVLQSVPGGADARPFETHHNALDLPLTLRIATELHLKRLVV 240
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFE++YE+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM++TE+++ H V G
Sbjct: 241 GGFERVYELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMDLTEQLIAHVCQQVCGST 300
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
TI YQG EI L PWRR TMH LV+EATG+DF G+ + A + L
Sbjct: 301 TIRYQGNEIDLTPPWRRVTMHELVQEATGLDFGAFGSRAEAAAAMEAKGLA--------- 351
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+ SVG LL E FE VE L+QPTFV+DYP+E SPLA+ HR GL ERFELFI G
Sbjct: 352 APALADSVGRLLVEAFEQTVETDLIQPTFVIDYPVENSPLARAHRSKPGLVERFELFIVG 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE ANAFSEL DP+DQR RLE Q+ R AA DD + EV D+D
Sbjct: 412 RETANAFSELIDPVDQRQRLEAQM-----ARKAA-------------GDDEAQEV--DED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE GMPP G+G+GIDRLVMLLT+SASIRDVIAFP+L+
Sbjct: 452 FIQALEVGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLR 493
>gi|298713460|emb|CBJ27015.1| Lysyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 710
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/532 (52%), Positives = 367/532 (68%), Gaps = 47/532 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA+RI K EE+R+ G PYAY WD THS+++LQ+ + L G E E VSVAGR++
Sbjct: 199 LRAVRIGKAEEIRAAGGNPYAYSWDVTHSSSELQKQWEGLEAGTED--EEAEVSVAGRIM 256
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
ARR FGKLAF ++D G+ QLY +K RL D+F LK + D GDI+G G++KRT+KGE
Sbjct: 257 ARRVFGKLAFFNMQDSEGSFQLYIDKGRL-GDEFKDLKTWTDAGDIVGAKGTVKRTDKGE 315
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V S+ +L+KS+LPLPDK+HGL D +KRYRQR+VDM+ P V DVFR RAK+ S IR
Sbjct: 316 LSVYVKSWAMLSKSVLPLPDKFHGLKDTEKRYRQRHVDMMVNPAVRDVFRMRAKVTSFIR 375
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
++++ F+E+ETPVLQ AGGA A+PF T+HN L L LRIATELHLKR+++GGF+++
Sbjct: 376 RSLDDDDFLEIETPVLQSIAGGAAAKPFATHHNVLDMPLTLRIATELHLKRLVVGGFDRV 435
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI---D 358
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE +V A V G + +
Sbjct: 436 YELGRIFRNEGISTRHNPEFTSVEVYQAYADYHDMMELTERLVAGAASEVLGTTAVSGGE 495
Query: 359 YQGV--EICLERPWRRETMHNLVKEATGIDFNEL-----GNDLKVAKETTLRA---LGDG 408
+G ++ L+ PWRR TM++LV+E G+DF L L A+ET L+A G
Sbjct: 496 EEGAPPDVDLKAPWRRVTMNDLVREKIGLDFEALDMSDPAAALATARETALKAGVHKAAG 555
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
LE G +LNE FE + E L+QPT V+D+PIE+SPLAKPHR G TER
Sbjct: 556 LETP-----------GYILNECFEELCEADLIQPTIVMDHPIEVSPLAKPHRTKPGYTER 604
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE+F+ GREMANAFSELTDP+DQR R E Q K+AA D+ +
Sbjct: 605 FEVFVQGREMANAFSELTDPVDQRNRFELQA----AKKAAG--------------DEEAC 646
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+V DDDF+ ALE GMPP +G+G+GIDRL+MLL + SIRDVIAFP+L+ +
Sbjct: 647 DV--DDDFLDALERGMPPTAGLGIGIDRLIMLLAGATSIRDVIAFPLLRAEN 696
>gi|159904285|ref|YP_001551629.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|238687128|sp|A9BD62.1|SYK_PROM4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|159889461|gb|ABX09675.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 503
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/525 (53%), Positives = 365/525 (69%), Gaps = 40/525 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K + L+ G PY +++ TH A LQ ++ LANG+E E V VAGRV+
Sbjct: 4 LKETRLEKAQVLKKLGNGPYGIRFEVTHKAAVLQVEHQDLANGQERQLE---VCVAGRVI 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS----DQ-----FDQLKVFVDIGDILGVSG 172
+RR GKLAF TL D+SG+IQL+ EK L DQ F QL VD GD +GV+G
Sbjct: 61 SRRVMGKLAFFTLSDESGSIQLFLEKATLEEHSDLDQESPGSFSQLTDLVDSGDWIGVNG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++RT++GELS+ V S+ +L KSL PLPDK+HGL+DV+KRYRQRYVD+I P+ FR
Sbjct: 121 ILRRTDRGELSIKVFSWTMLCKSLQPLPDKWHGLSDVEKRYRQRYVDLIVNPQSRKTFRS 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA +VS IR+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 181 RALMVSAIRRWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLSLYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFE++YE+GRIFRNEG+STRHNPEFTT+E+Y+A++DY MM++TEE+++ +
Sbjct: 241 LVVGGFERVYELGRIFRNEGISTRHNPEFTTVEIYQAFADYTDMMDLTEEMISFVCSQIC 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G TI YQG E+ L PWRR TMH LV E+TG+DF E G D+ A T ++++G
Sbjct: 301 GSTTIQYQGKEVDLTPPWRRITMHELVLESTGLDFYEFGQDISKAS-TAMQSVGLN---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
V + + SVG L+NE FE VE L QPTFV+DYPIEISPLA+ HR G+ ERFELF
Sbjct: 356 ---VPDHADSVGRLMNEAFEQAVEGDLFQPTFVMDYPIEISPLARKHRSKPGIVERFELF 412
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE ANAFSEL DP+DQ+ RL + Q + ++A + +
Sbjct: 413 IAGRETANAFSELIDPVDQKERL---LLQQSRRQAGDLEAH-----------------VI 452
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFV ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 453 DEDFVNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 497
>gi|124021897|ref|YP_001016204.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
gi|166229815|sp|A2C629.1|SYK_PROM3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123962183|gb|ABM76939.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 508
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/524 (53%), Positives = 357/524 (68%), Gaps = 40/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L+ G PYA +++ +H LQ + LA GEE VSVAGRV+
Sbjct: 12 LRETRLEKAQALKELGNGPYALRFESSHRTANLQADHADLAKGEERLLS---VSVAGRVM 68
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK--------ERLLSDQFDQLKVFVDIGDILGVSGS 173
ARR GKLAF TL D++GTIQLY +K L S F QL VD GD +GV+G
Sbjct: 69 ARRVMGKLAFYTLADETGTIQLYLDKATIDAAASNELASGTFVQLTTLVDAGDWIGVTGV 128
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELSV V + IL+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+R
Sbjct: 129 LRRTDRGELSVKVQQWQILSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRR 188
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A +VS IR+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+
Sbjct: 189 ALMVSAIRRWLDDRAFLEIETPVLQAEAGGAEARPFITHHNTLDLPLYLRIATELHLKRL 248
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE++++ + G
Sbjct: 249 VVGGFERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYADYIDMMVLTEQLISSVCTQICG 308
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQG+EI L PWRR +MH LV+EATG+DF + A GLE
Sbjct: 309 STRITYQGIEIDLTPPWRRASMHELVQEATGLDFMGFADRAVAASAMARA----GLEVPS 364
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
K + SVG LLNE FE VE L+QPTFVLDYPIEISPLA+ HR GL ERFELFI
Sbjct: 365 K-----ADSVGRLLNEAFEQAVEVSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFI 419
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DPLDQR RLE Q Q + + D ++ V D
Sbjct: 420 VGRETANAFSELIDPLDQRQRLEAQ------------------QARRQAGDLEAHGV--D 459
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVML T+S SIRDVIAFP+L+
Sbjct: 460 EDFLQALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIAFPLLR 503
>gi|78211662|ref|YP_380441.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
gi|123770824|sp|Q3ANE6.1|SYK_SYNSC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|78196121|gb|ABB33886.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
Length = 502
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/519 (53%), Positives = 356/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L G PYA + +H +LQ + L GEE + VSVAGRV+
Sbjct: 4 LRDTRLEKARTLEELGQGPYALTFSPSHRMAELQVTHADLPKGEERDVS---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++G+IQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGSIQLFLEKAGLEAQQEGWFKQITSLVDSGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V+ + +LTK+L PLPDK+HGL DV+KRYRQRY+D++ P+ + FR+RA++VS
Sbjct: 121 RGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLVVSPDSRETFRRRARLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDQRDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE++V+ V G TI
Sbjct: 241 ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYVGMMELTEQMVSAVCEEVCGTTTIT 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG EI L PWRR TMH LV++ATG+DFN + + A T + L E
Sbjct: 301 YQGTEIDLAPPWRRATMHELVQDATGLDFNGFSSREEAAAAMTAKGL---------HAPE 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ SVG LLNE FE VE L+QPTFV DYP+EISPLA+PHR GL ERFELFI GRE
Sbjct: 352 LADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREH 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSELTDP+DQR RLE Q ++AA E LD+DFV
Sbjct: 412 ANAFSELTDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVM 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+ SIRDVIAFP+L+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDCPSIRDVIAFPLLR 490
>gi|124026775|ref|YP_001015890.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961843|gb|ABM76626.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 513
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/524 (53%), Positives = 364/524 (69%), Gaps = 39/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L++ G PY + T SA LQ Y+ L NGEE + D VS+AGRV
Sbjct: 11 LRDTRLEKAKALKTLGKGPYGLNFRPTDSAAVLQGKYKDLPNGEE---KKDEVSIAGRVT 67
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERL--------LSDQFDQLKVFVDIGDILGVSGS 173
+RR GKLAF TL D++G IQL+ EK L + F+ + VD GD +GVSG
Sbjct: 68 SRRVMGKLAFFTLSDETGIIQLFLEKATLNRNEDSENPKNNFENITSLVDSGDWIGVSGI 127
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELS+ V + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ FR R
Sbjct: 128 LRRTDRGELSIKVFEWSMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVNPQSRKTFRTR 187
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A +VS IR+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+
Sbjct: 188 ALLVSSIRRWLDEKDFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRL 247
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGF+++YE+GRIFRNEG+STRHNPEFT++E+YEA++DY MM++TE++++ + G
Sbjct: 248 VVGGFQRVYELGRIFRNEGISTRHNPEFTSVEIYEAFADYFDMMDLTEKLLSSVCEKICG 307
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I+YQ EI L+ PWRR TMH+LVKE TGIDF G++ AK R +GL+ D
Sbjct: 308 STKINYQEQEIDLQPPWRRATMHDLVKEFTGIDFELFGDNADDAKAEMSR---EGLQVPD 364
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
K + +VG LLNE FE VEP+L+QPTFV+DYPIEISPLA+ HR GL ERFELFI
Sbjct: 365 K-----ADTVGILLNEAFEQAVEPELIQPTFVMDYPIEISPLARKHRTKKGLVERFELFI 419
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DP+DQR RL + Q +K A + +S LD
Sbjct: 420 VGRETANAFSELIDPIDQRERL---LLQQAKKEAGDLEAQS-----------------LD 459
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDR VMLLT+S SIRDVIAFP+L+
Sbjct: 460 EDFINALEVGMPPTGGLGIGIDRFVMLLTDSPSIRDVIAFPLLR 503
>gi|87301696|ref|ZP_01084536.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
gi|87283913|gb|EAQ75867.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
Length = 506
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/518 (54%), Positives = 356/518 (68%), Gaps = 38/518 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K E LR G PY ++D +H +LQ ++ LANG+E ++ VSVAGRV+ RR
Sbjct: 13 RLDKAEVLRGLGQGPYGLRFDPSHRHAELQRLHADLANGQE---RDERVSVAGRVMTRRV 69
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERL---LSDQ---FDQLKVFVDIGDILGVSGSMKRTEK 179
GKLAF TL D++G IQL+ EK L L DQ F QL VD GD +GVSGS++RT++
Sbjct: 70 MGKLAFFTLLDETGPIQLFIEKATLAAALPDQPEAFTQLTTLVDAGDWIGVSGSLRRTDR 129
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELSV V + +LTK+L PLPDK+HGL DV+KRYRQRY+D++ P+ + FR+RA +VS
Sbjct: 130 GELSVKVTGWQMLTKALQPLPDKWHGLADVEKRYRQRYLDLVVSPQTRETFRRRALLVSG 189
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ F+E+ETPVL AGGA+ARPF T+HN+L L LRIATELHLKR+++GGFE
Sbjct: 190 IRRWLDERQFLEIETPVLNAEAGGADARPFTTHHNTLDLPLVLRIATELHLKRLVVGGFE 249
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YE+GRIFRNEG+STRHNPEFTT+E+Y+AY+DY MM +TEE++ V G I+Y
Sbjct: 250 RVYELGRIFRNEGVSTRHNPEFTTVEIYQAYADYTDMMVLTEELIASVCQQVCGTTAIEY 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG I L PWRR TMH LV++ATG+DFN + ++ GLE V E+
Sbjct: 310 QGTAIDLTPPWRRATMHELVEQATGLDFNGFSS----REQAAAAMAAAGLE-----VPEA 360
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ SVG LLNE FE VE L+QPTFV DYP+E SPLA+ HR GL ERFELFI GRE A
Sbjct: 361 ADSVGRLLNEAFEQRVEDSLIQPTFVTDYPVENSPLARAHRSKPGLVERFELFIVGRETA 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP+DQR RLE Q E+RAA E +D+DF+ A
Sbjct: 421 NAFSELIDPIDQRRRLEAQ----QERRAAGDLEAHG----------------VDEDFLHA 460
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LE GMPP G+G+GIDRL MLLT+S SIRDVIAFP+L+
Sbjct: 461 LEVGMPPTGGLGIGIDRLAMLLTDSPSIRDVIAFPLLR 498
>gi|223998046|ref|XP_002288696.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220975804|gb|EED94132.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 502
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/520 (52%), Positives = 358/520 (68%), Gaps = 30/520 (5%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYR-HLANGEESNSENDHVSVAGRV 120
+R R+ K +R G+EPYAY + +A+QL + Y L GEE +N ++VAGR+
Sbjct: 6 LRESRLSKAASMRESGVEPYAYVYKPNRTASQLMKEYEGKLEPGEEDECDNAEIAVAGRI 65
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLL---SDQFDQLKVFVDIGDILGVSGSMKRT 177
+ARR FGKLAF TL+D++G IQL +K+RL +D F LK + D GDI+G G+++RT
Sbjct: 66 MARRVFGKLAFYTLQDETGVIQLQFDKKRLGERDADSFKNLKAWTDSGDIIGAKGTIRRT 125
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
+KGEL++ + +LTKS LPLPDKYHGLTD+ KRYR R++D+I P V D F KRAKI
Sbjct: 126 DKGELTLYATEWTMLTKSALPLPDKYHGLTDISKRYRNRHLDLIVNPSVRDTFYKRAKIT 185
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
S +R+ +++ GF+E+ETPVL GGAEA+PF TYHN++ DL LRIATELHLKR++IGG
Sbjct: 186 SSLRRQLDAKGFLEIETPVLHTQPGGAEAKPFETYHNTMDMDLTLRIATELHLKRLIIGG 245
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
F ++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM++TEE+V A V+ L +
Sbjct: 246 FPRVYELGRIFRNEGISTRHNPEFTSVELYQAYADYHDMMDLTEELVCGMANEVSDSLIM 305
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
Y I LERPWRR TMH++VKE DF D ++ +TL A +
Sbjct: 306 PYGEYTISLERPWRRVTMHDIVKEEIP-DF-----DFDLSDPSTLDAAKAAATAAGVPDV 359
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+VG +LN FE + EPKL+QPTFV+DYP+E+SPL+KPHR G+ ERFELF GRE
Sbjct: 360 GKCSTVGYVLNACFEELCEPKLIQPTFVIDYPVEVSPLSKPHRNKPGMVERFELFATGRE 419
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
MAN+FSELTDP+DQR R E Q K+AA E +D++F+
Sbjct: 420 MANSFSELTDPVDQRERFEAQA----AKKAAGDEEACD----------------VDEEFL 459
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 460 SALEQGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 499
>gi|126697148|ref|YP_001092034.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|166229814|sp|A3PFA8.1|SYK_PROM0 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|126544191|gb|ABO18433.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 512
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/525 (51%), Positives = 365/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K L SKG YA + +H+ + L + + +L NG+E EN VS+AGRV+
Sbjct: 4 IKEARLQKASSLVSKGFASYAQSFRVSHTTSFLIQKFDYLENGQE---ENFSVSLAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK---------ERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY EK ++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQDGQIQLYLEKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IRK +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+STRHNPEFT++E+YEAYSDY MMN+TEE++
Sbjct: 239 MVVGGFEKVYELGRIFRNEGISTRHNPEFTSVEIYEAYSDYVDMMNLTEELIKDILADAC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G LTI+YQ EI +PW R +M ++VK+ TGIDF+ D AK+ ++ + NK
Sbjct: 299 GSLTINYQNKEIDFSKPWLRISMKDIVKKYTGIDFHSFNGDFLAAKK-AVKNINVDFSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++G LLNEVFE VE KL++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 -------VNTIGRLLNEVFEQKVESKLIEPTFVIDYPVEISPLARPHFDNKEIVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ D +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDKGDLEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNSASIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPLLK 495
>gi|148238513|ref|YP_001223900.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
gi|166230596|sp|A5GI38.1|SYK_SYNPW RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|147847052|emb|CAK22603.1| Lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
Length = 489
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/516 (54%), Positives = 358/516 (69%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++KV LR +G EPYA +D + +LQ + L GEE + V+VAGRV+
Sbjct: 4 LRETRLEKVSALRDQGREPYALTFDPSDRMARLQSDHADLPKGEERDCA---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++GTIQL+ EK L + F Q+ VD GD++GV G+++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKA-ALGEAFAQITSLVDAGDLIGVRGTLRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA VS IR
Sbjct: 120 LSVKVAEWTMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRALTVSAIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+++GGFE++
Sbjct: 180 RWLDEREFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY M+ +TE ++ V G + YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEVYQAYADYLGMIELTESMIASVCEQVCGGTRLTYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L PWRR TMH LV+EATG+DF + A+ T + GL DK +
Sbjct: 300 TEIDLTPPWRRATMHELVEEATGLDFTAFADRAAAAEAMTAK----GLPVPDK-----AD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG LLNE FE VE L+QPTFVLDYP EISPLA+ HR GL ERFELFI GRE ANA
Sbjct: 351 SVGRLLNEAFEHAVEANLIQPTFVLDYPEEISPLARKHRSKPGLVERFELFIVGRETANA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR RLE Q + R AA E++ +D+DF+ ALE
Sbjct: 411 FSELIDPVDQRGRLEAQ-----QARRAAGDEEAQG---------------VDEDFLQALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 486
>gi|148241213|ref|YP_001226370.1| lysyl-tRNA synthetase [Synechococcus sp. RCC307]
gi|166230597|sp|A5GQ58.1|SYK_SYNR3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|147849523|emb|CAK27017.1| Lysyl-tRNA synthetase [Synechococcus sp. RCC307]
Length = 502
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/516 (53%), Positives = 353/516 (68%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L G PYA +++ +H +LQ+ + L NGEE + V++AGRV+
Sbjct: 4 LRDTRLEKAQALIECGQVPYALRFEPSHRTAELQQAHADLPNGEERDVS---VAIAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++G IQL+ EK L D F Q+ VD GD +GV G+++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGPIQLFLEKA-ALGDAFKQITSLVDAGDWIGVKGTLRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ D FR+RA++VS IR
Sbjct: 120 LSVKAAQWQMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPDTRDTFRRRAQLVSGIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGFE++
Sbjct: 180 RWLDERDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+A++DY MM++TEE+++ V G I+YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEIYQAFADYNDMMDLTEELISSVTQQVCGSTLINYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L WRR TMH LVKEATG+DF + A +E K +
Sbjct: 300 TEINLAPGWRRATMHELVKEATGLDFAGFSSREDAAA---------AMEAKGLQTPALAD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG LLNE FE VE L+QPTFV DYP+EISPLA+ HR GL ERFELFI GRE NA
Sbjct: 351 SVGRLLNEAFEQAVEETLIQPTFVTDYPVEISPLARSHRSKPGLVERFELFIVGREHGNA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSELTDP+DQR RLE Q E+RAA E +D+DF+ ALE
Sbjct: 411 FSELTDPVDQRQRLEAQ----QERRAAGDLEAQR----------------VDEDFLNALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 486
>gi|78780096|ref|YP_398208.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
gi|123755041|sp|Q318C3.1|SYK_PROM9 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|78713595|gb|ABB50772.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
Length = 512
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/525 (50%), Positives = 366/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L SKG YA + +H+ L + + +L NG+E E+ VS+AGRV+
Sbjct: 4 IREARLQKANSLVSKGFASYAESFSVSHTTKFLIQKFDYLENGQE---EDFSVSLAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK---------ERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY +K ++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQEGQIQLYLDKRMINCNLENQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IR+ +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRQWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+ST+HNPEFT++E+Y+A+S+Y MMN+TEE++ V
Sbjct: 239 MVVGGFEKVYELGRIFRNEGISTKHNPEFTSVEIYQAFSNYVDMMNLTEELIKDIVFNVC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQ EI +PW R +M ++VK+ TGIDF+ D + AK+ ++++ NK
Sbjct: 299 GSLVINYQNKEIDFSKPWSRISMKDIVKKYTGIDFDSFSGDFQSAKQ-AVKSINVEFSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
S+G LLNEVFE VE +L++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 VN-------SMGRLLNEVFEQKVESELIEPTFVIDYPVEISPLARPHLDNKEMVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ DH +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDEGDHEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNS SIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSPSIRDVIPFPLLK 495
>gi|33241228|ref|NP_876170.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|39932090|sp|Q7V9Q0.1|SYK_PROMA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33238758|gb|AAQ00823.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 502
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/524 (52%), Positives = 359/524 (68%), Gaps = 39/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K LR G +PYA + TH +LQ ++ L NG++ + V+VAGRV+
Sbjct: 4 LRETRLEKAASLRKVGKDPYALNFHPTHKTAELQSDHKDLPNGQDREIK---VAVAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS--------DQFDQLKVFVDIGDILGVSGS 173
+RR GKLAF TL D+SG+IQL+ EK L F Q+ FVD GD LGV+G
Sbjct: 61 SRRVMGKLAFFTLLDESGSIQLFLEKATLEEFDTSENQVSSFKQITDFVDAGDWLGVNGI 120
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELS+ V+S+ IL KSL PLPDK+HGL D++KRYRQRY+D++ P+ FR+R
Sbjct: 121 LRRTDRGELSIKVHSWKILCKSLQPLPDKWHGLADIEKRYRQRYLDLVVNPDSRKTFRRR 180
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A VS IR+ ++ F+E+ETPVLQ AAGGA+ARPF+T+HN+ L+LRIATELHLKR+
Sbjct: 181 ALTVSAIRRWLDERSFLEIETPVLQSAAGGADARPFITHHNTFDIPLFLRIATELHLKRL 240
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+A++DY MM++TEE+++ + + G
Sbjct: 241 VVGGFERVYELGRIFRNEGISTRHNPEFTSVEIYQAFADYNQMMDLTEELISSVCIEICG 300
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQ V + L PWRR TM LV EATGIDF+ D + A + GLE
Sbjct: 301 STKISYQDVSLDLTPPWRRVTMQELVLEATGIDFDNFDGDQEKASSEMINL---GLE--- 354
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
V ++ SVG L+NE FE VEP L+QPTFV+DYPI+ISPLA+ HR + ERFELFI
Sbjct: 355 --VPSTADSVGRLMNEAFEQKVEPNLIQPTFVIDYPIDISPLARKHRCKEDMVERFELFI 412
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DP+DQR RL Q + NE A HS LD
Sbjct: 413 AGRETANAFSELIDPIDQRERLLAQQIRKNEGDIEA----------------HS----LD 452
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 453 EDFLNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 496
>gi|219110245|ref|XP_002176874.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411409|gb|EEC51337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 485
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/508 (53%), Positives = 356/508 (70%), Gaps = 31/508 (6%)
Query: 73 LRSKGLEPYAYKWDRTHSANQLQEIYRH-LANGEESNSENDHVSVAGRVVARRAFGKLAF 131
+R G++P+ Y + TH++ L ++Y H L NGEE S N VSVAGR++ RR FGKLAF
Sbjct: 1 MREVGVDPFEYTFATTHTSADLNKLYEHKLENGEEDESAN--VSVAGRIMTRRVFGKLAF 58
Query: 132 LTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVI 191
T++D+ G IQL +K RL D F LK + D DI+GV G+++RT+KGEL+V + +
Sbjct: 59 FTMQDEMGMIQLQFDKGRL-GDTFKNLKDWTDGSDIIGVRGTIRRTDKGELTVFATEWKM 117
Query: 192 LTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVE 251
LTKS+LPLPDKYHGL DV KRYR R++DMIS P V + FRKRA I S++R+ ++ GF+E
Sbjct: 118 LTKSILPLPDKYHGLQDVTKRYRSRHLDMISNPGVRETFRKRALITSKLRRMLDDKGFLE 177
Query: 252 VETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNE 311
+ETP L +GGAEA+PF TYHNS+ L LRIATELHLKR+++GGF+++YE+GRIFRNE
Sbjct: 178 IETPTLHTQSGGAEAKPFETYHNSMDMQLTLRIATELHLKRLIVGGFDRVYEVGRIFRNE 237
Query: 312 GLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWR 371
G+STRHNPEFT++E+Y+AY+DY MMN+TEE+V A V G L+I Y + LERPWR
Sbjct: 238 GISTRHNPEFTSVELYQAYADYDDMMNLTEELVCTIAEEVCGSLSIPYGEHMVSLERPWR 297
Query: 372 RETMHNLVK-EATGIDFNELGNDLKVAKET-TLRALGDGLENKDKFVIESSPSVGNLLNE 429
R TMH++VK E DF+ L + L + T A+ G+ N ++ ++G +LN
Sbjct: 298 RVTMHDIVKEEMPDFDFSALDSQLPESLNTAKAAAIAAGVPN-----VQGLNTIGYVLNA 352
Query: 430 VFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPL 489
FE + EPKL+QPTFV+DYP+++SPLAK HR GLTERFELF GRE ANAFSELTDP+
Sbjct: 353 CFEELCEPKLIQPTFVIDYPVDVSPLAKRHRNKPGLTERFELFAVGREHANAFSELTDPI 412
Query: 490 DQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASG 549
DQR R E Q K+AA E +D+DF+ ALE GMPP G
Sbjct: 413 DQRERFEAQA----AKKAAGDEEACD----------------VDEDFLQALEQGMPPTGG 452
Query: 550 MGLGIDRLVMLLTNSASIRDVIAFPILK 577
+G+GIDRLVMLLTNS SIRDVIAFP+L+
Sbjct: 453 LGIGIDRLVMLLTNSPSIRDVIAFPLLR 480
>gi|317968463|ref|ZP_07969853.1| lysyl-tRNA synthetase [Synechococcus sp. CB0205]
Length = 499
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 277/516 (53%), Positives = 356/516 (68%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L G PYA +++ +H +LQ+ + L NGEE + VSVAGRV+
Sbjct: 4 LRETRLEKGKALAELGQGPYALRFEPSHRTAELQQAHADLPNGEERDVS---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++G IQL+ EK L + F L VD GD++GV GS++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGPIQLFIEKA-TLEEAFGHLTSLVDAGDLIGVKGSLRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V S+ +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA VS IR
Sbjct: 120 LSVKVKSWQMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPDTRETFRRRAIAVSSIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ GF+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGFE++
Sbjct: 180 RWLDERGFLEIETPVLQSVPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM++TE+++ H V G I YQG
Sbjct: 240 YELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMDLTEQLIAHVCQQVCGTTRISYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L PWRR TMH LV +ATG+DF+ + + A + V E +
Sbjct: 300 TEIDLTPPWRRATMHELVLDATGLDFSSFVSRAEAAAAMQ---------AQGLAVPELAD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG LL E F+ VE L+QPTFV+DYP+E SPLA+ HR GL ERFELFI GRE ANA
Sbjct: 351 SVGRLLVEAFDQKVESTLIQPTFVIDYPVENSPLARAHRSKPGLVERFELFIVGRETANA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR RLE Q+ R AA DD + EV D+DF+ ALE
Sbjct: 411 FSELIDPVDQRQRLEAQM-----ARKAA-------------GDDEAQEV--DEDFINALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 486
>gi|449018031|dbj|BAM81433.1| lysine--tRNA ligase class II, chloroplast or mitochondrial
[Cyanidioschyzon merolae strain 10D]
Length = 608
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/538 (50%), Positives = 376/538 (69%), Gaps = 40/538 (7%)
Query: 49 ASSSSTSTSDR-EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
AS S +T++ +R+ R++KV +R G+EPYAY+++ +HS L +++ + G +
Sbjct: 88 ASPESGATANNLRVLRSARLEKVHAMRQAGVEPYAYRFEVSHSTQDLHQLFGDVEPG--T 145
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL-------LSDQFDQLKV 160
++ HVS+AGR++ RR FGKLAF TL+D SGTIQLY +K+R+ + + F +LK
Sbjct: 146 IRDDVHVSIAGRIMNRRIFGKLAFFTLQDSSGTIQLYLDKQRITEHMQNRIPESFSRLKQ 205
Query: 161 FVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDM 220
++D GDI+GV+GS++RTEKGELSV V + +LTKSL PLPDK+HGLTD++KRYRQR++D+
Sbjct: 206 WIDAGDIIGVTGSIRRTEKGELSVYVKEWTMLTKSLRPLPDKWHGLTDIEKRYRQRHMDL 265
Query: 221 ISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDL 280
I P V DVFRKRA+I + IR+ +++ GF+E+ETP L AGGAEARPFVT+HN+L DL
Sbjct: 266 IVNPAVRDVFRKRAQITAAIRRFLDTHGFLEIETPALHQQAGGAEARPFVTHHNALDMDL 325
Query: 281 YLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNIT 340
YLRIATELHLKR+++GGF+++YE+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +
Sbjct: 326 YLRIATELHLKRLVVGGFDRVYEMGRIFRNEGISTRHNPEFTSIEIYQAYADYGDMMRLM 385
Query: 341 EEIVTHCALAVN-GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKE 399
E++V V+ G L + YQ E+ PWRR ++ +++E TG+D+ L+ A+
Sbjct: 386 EDLVVQVLRDVHQGVLQVRYQDTELDFSPPWRRVSLFQMLQERTGMDWRSTALSLEEAR- 444
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
L +K + S+ + VFE + E LVQPTFV+D+P E SPLAKPH
Sbjct: 445 --------ALAHKHGCPAGDARSIAEVAVAVFESLCESDLVQPTFVVDHPRETSPLAKPH 496
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
R +GL ERFE++ GRE+ANAFSELTDP+DQR R EQ + ++AA
Sbjct: 497 RSESGLVERFEVYCAGRELANAFSELTDPVDQRERFVEQ----SARKAAG---------D 543
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
L+ D +D+ F+ ALE GMPP G+G+GIDRLVMLLTN+ SIRDVIAFP+L+
Sbjct: 544 LEACD-------VDESFLAALETGMPPTGGLGIGIDRLVMLLTNAPSIRDVIAFPLLR 594
>gi|254527072|ref|ZP_05139124.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221538496|gb|EEE40949.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 512
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/525 (51%), Positives = 365/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K L SKG YA + +++ + L + + +L NG+E E+ VS+AGRV+
Sbjct: 4 IKEARLQKASSLVSKGFASYAQSFKVSNTTSFLLQEFDYLENGQE---EDFSVSLAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYC---------EKERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY EK++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPNSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IRK +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+STRHNPEFT++E+YEAYSDY MMN+TEE++
Sbjct: 239 MVVGGFEKVYELGRIFRNEGISTRHNPEFTSVEIYEAYSDYFDMMNLTEELIKDVVADSC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQ EI +PW R +M ++VK+ TGIDF+ D AK+ ++ + L NK
Sbjct: 299 GSLIINYQNKEIDFSKPWLRISMKDIVKKYTGIDFDSFSGDFLAAKQ-AVKNINVDLSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++G LLNEVFE VE KL++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 -------VNTMGRLLNEVFEQKVESKLIEPTFVIDYPVEISPLARPHLDNKEIVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ D +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDEGDLEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNSASIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPLLK 495
>gi|78183738|ref|YP_376172.1| lysyl-tRNA synthetase [Synechococcus sp. CC9902]
gi|123729968|sp|Q3B0J9.1|SYK_SYNS9 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|78168032|gb|ABB25129.1| Lysyl-tRNA synthetase, class-2 [Synechococcus sp. CC9902]
Length = 502
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/519 (54%), Positives = 354/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L G PYA +D +H +LQ + L NGEE V+VAGRV+
Sbjct: 4 LRDTRLEKANTLEQLGQGPYALTFDPSHRMAELQADHADLPNGEERELS---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++GTIQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITSLVDAGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA +VS
Sbjct: 121 RGELSVKVRDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDERQFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE ++ V G I
Sbjct: 241 ERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYSDYIGMMELTEAMIAEVCQQVCGGTRIH 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG +I L PWRR TMH LV+EATG++F + A+ GLE V
Sbjct: 301 YQGTDIDLTPPWRRATMHELVEEATGLNFEAFTTRAQAAEAMEAA----GLE-----VPG 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
++ SVG LLNE FE VE L+QPTFV DYPIEISPLA+ HR GL ERFELFI GRE
Sbjct: 352 AADSVGRLLNEAFEQRVEASLIQPTFVTDYPIEISPLARKHRSKPGLVERFELFIVGRET 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQR RLE Q ++AA E LD+DFV
Sbjct: 412 ANAFSELIDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVH 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+++
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMR 490
>gi|194476928|ref|YP_002049107.1| lysyl-tRNA synthetase [Paulinella chromatophora]
gi|171191935|gb|ACB42897.1| lysyl-tRNA synthetase [Paulinella chromatophora]
Length = 519
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/522 (53%), Positives = 363/522 (69%), Gaps = 36/522 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L S G PYA +++ TH + LQE L NGEE N V++AGRV+
Sbjct: 4 LRETRLEKAQILNSLGQGPYAIRFEPTHHNSILQESQYDLFNGEERNLT---VAIAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLL------SDQFDQLKVFVDIGDILGVSGSMK 175
A+R GKLAF TL D++G IQLY EK L S F L VD GD++G+ G+++
Sbjct: 61 AKRVMGKLAFFTLADETGLIQLYIEKATLAISMSGDSLAFSHLTSLVDTGDLIGIYGTLR 120
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RTE+GELSV V + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ + R+RA+
Sbjct: 121 RTERGELSVRVKKWHMLTKSLHPLPDKWHGLADVEKRYRQRYLDLIVSPQTRETLRRRAQ 180
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
+VS IR+ ++ F+E+ETPVL AGGAEARPF+T HN+L LYLRIATELHLKR+++
Sbjct: 181 VVSGIRRWLDEREFLEIETPVLHVEAGGAEARPFITQHNTLDLPLYLRIATELHLKRLVV 240
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFE++YE+GRIFRNEG+S+RHNPEFT++E+Y+AY+DY MM++TE+++ A V G
Sbjct: 241 GGFERVYELGRIFRNEGVSSRHNPEFTSVEIYQAYADYTDMMDLTEQLIDTIANQVCGTS 300
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I+YQ I L PWRR TMH LVKEATG+DF L +D + A E L + +K
Sbjct: 301 KIEYQEEIIDLTPPWRRATMHELVKEATGLDFT-LFSDYETASEAI--TLSGIMLSK--- 354
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+++ SVG+LLN +FE VE L+QPTFV DYPIEISPLA+ HR +GL ERFELFI G
Sbjct: 355 -LDAQSSVGHLLNYIFENAVEHTLIQPTFVTDYPIEISPLARKHRNKSGLVERFELFIVG 413
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE ANAFSEL DP+DQR RLE AQ+ +++ D + +D+D
Sbjct: 414 RETANAFSELIDPIDQRERLE-------------------AQQLRRQAGDLEANM-IDED 453
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE GMPP G+G+GIDRL MLLTNS SIRDVIAFP+LK
Sbjct: 454 FLQALEVGMPPTGGLGIGIDRLTMLLTNSPSIRDVIAFPLLK 495
>gi|254431514|ref|ZP_05045217.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
gi|197625967|gb|EDY38526.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
Length = 522
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/524 (52%), Positives = 350/524 (66%), Gaps = 40/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L S G PY ++ +HS QLQ+ + L NG+E + V+VAGRV+
Sbjct: 4 LRETRLEKARTLASLGQGPYGLRFSPSHSTAQLQQAHADLPNGQERDVA---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS--------DQFDQLKVFVDIGDILGVSGS 173
RR GKLAF TL D+SG IQLY EK L + F Q+ VD GD++GV GS
Sbjct: 61 TRRVMGKLAFFTLADESGPIQLYLEKATLEAACPEAPPPGAFGQITTLVDAGDLIGVEGS 120
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELSV V S+ +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P + FR+R
Sbjct: 121 LRRTDRGELSVKVKSWTMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPHTRETFRRR 180
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A VS +R+ ++ GF+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+
Sbjct: 181 ALAVSAMRRWLDERGFLEIETPVLQSQPGGADARPFETHHNALDLPLTLRIATELHLKRL 240
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE+++ H V G
Sbjct: 241 VVGGFERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYADYTDMMELTEQLLAHVCQQVCG 300
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQG I L PWRR TMH+LV +ATG+DF + + A L
Sbjct: 301 TTAITYQGTAIDLAPPWRRATMHDLVLQATGLDFTGFASRAEAAAAMEAAGL-------- 352
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
V E + SVG LL E FE VE L+QPTFVLDYP+E SPLA+ HR G+ ERFELFI
Sbjct: 353 -VVPEPADSVGRLLVEAFEQRVEDTLIQPTFVLDYPVENSPLARAHRSKPGMVERFELFI 411
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DPLDQR RLE Q ++AA E +D
Sbjct: 412 VGRETANAFSELIDPLDQRQRLEAQ----QARKAAGDLEAHG----------------VD 451
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 452 EDFLQALEVGMPPTGGLGIGIDRLVMLLTDSTSIRDVIAFPLLK 495
>gi|157414225|ref|YP_001485091.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
gi|166980068|sp|A8G7C4.1|SYK_PROM2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|157388800|gb|ABV51505.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 512
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/525 (51%), Positives = 365/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K L SKG YA + +++ + L + + +L NG+E++ VSVAGRV+
Sbjct: 4 IKEARLQKARSLVSKGFASYAQSFKVSNTTSFLLQEFDYLENGQEADFS---VSVAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYC---------EKERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY EK++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IRK +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+STRHNPEFT++E+YEAYSDY MMN+TEE++
Sbjct: 239 MVVGGFEKVYEMGRIFRNEGISTRHNPEFTSVEIYEAYSDYFDMMNLTEELIKDVVADSC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQ EI +PW R +M ++VK+ TGIDF+ D AK+ ++ + L NK
Sbjct: 299 GSLIINYQNKEIDFSKPWLRISMKDIVKKYTGIDFDSFSGDFLAAKQ-AVKNINVDLSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++G LLNEVFE VE KL++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 -------VNTMGRLLNEVFEQKVESKLIEPTFVIDYPVEISPLARPHFDNKEIVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ D +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDEGDLEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNSASIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPLLK 495
>gi|123969360|ref|YP_001010218.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
gi|123199470|gb|ABM71111.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
Length = 488
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/512 (52%), Positives = 356/512 (69%), Gaps = 42/512 (8%)
Query: 75 SKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTL 134
+KG YA + +H+ + L + + HL NG+E E+ VS+AGRV+A+R GK+AF T+
Sbjct: 2 NKGFASYAQSFKVSHTTSFLIQKFDHLENGQE---EDFSVSIAGRVLAKRVMGKIAFFTI 58
Query: 135 RDDSGTIQLYC---------EKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
D G IQLY EK++LLS F+ LK VDIGD +GV G++K+T KGELS+
Sbjct: 59 SDQEGQIQLYLDKRIINFNLEKQKLLS--FEDLKEIVDIGDWIGVYGTIKKTNKGELSIK 116
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+ RAK +S IRK ++
Sbjct: 117 VEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRKWLD 176
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKRM++GGFEK+YE+G
Sbjct: 177 NRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKRMVVGGFEKVYELG 236
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
RIFRNEG+STRHNPEFT++E+YEAYSDY MMN+TEE++ G L I+YQ EI
Sbjct: 237 RIFRNEGISTRHNPEFTSVEIYEAYSDYVDMMNLTEELIKDIVADACGSLIINYQNKEID 296
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+PW R +M +VK+ TGIDF+ D AK+ ++ + NK ++G
Sbjct: 297 FSKPWSRISMKAIVKKYTGIDFDSFSGDFLAAKQ-AVKNINVDCSNK-------VNTMGR 348
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LLNEVFE VE KLV+PTFV+DYP+EISPLA+PH + + +RFELFI GRE+ANAFSEL
Sbjct: 349 LLNEVFEQKVESKLVEPTFVIDYPVEISPLARPHHDNKQIVQRFELFIVGRELANAFSEL 408
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQR R++ Q+ L++ D +D+DF+ ALE GMP
Sbjct: 409 IDPVDQRERMQ-------------------LQQSLRDEGDLEAH-CIDEDFLNALEIGMP 448
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRL+ML+TNSASIRDVI FP+LK
Sbjct: 449 PTGGLGIGIDRLIMLITNSASIRDVIPFPLLK 480
>gi|123967040|ref|YP_001012121.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
gi|166229816|sp|A2BZ03.1|SYK_PROM5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123201406|gb|ABM73014.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 512
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/527 (51%), Positives = 366/527 (69%), Gaps = 46/527 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R+ K L +KG EPYA + +HS L E + +L NG+E + +VS+AGRV+
Sbjct: 4 IREARLLKANSLINKGFEPYAETFKISHSTRFLNEKFGYLDNGQEFDL---NVSLAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSD--------QFDQLKVFVDIGDILGVSGS 173
A+R GK+AF T+ D G IQLY EK R++ D F+ LK VDIGD +GV G+
Sbjct: 61 AKRVMGKIAFFTITDQEGKIQLYLEK-RIIDDYEINAKLLSFEDLKEIVDIGDWIGVFGT 119
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
+K+T KGELS+ V+ + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P VF+ R
Sbjct: 120 IKKTNKGELSIKVSKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPLSKTVFKTR 179
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
AK +S IR+ ++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKRM
Sbjct: 180 AKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKRM 239
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFEK+YE+GRIFRNEG+ST+HNPEFT++E+Y+A+S+Y MMN+TE+++ + L+
Sbjct: 240 VVGGFEKVYELGRIFRNEGVSTKHNPEFTSVEIYQAFSNYIDMMNLTEDLIKNIVLSCCD 299
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
L I+YQ I +PW+R +M N+VKE TGIDF+ DL AK+ + +
Sbjct: 300 SLVINYQDKVIDFSKPWKRISMKNVVKEYTGIDFDSFDGDLNKAKKFS-----------E 348
Query: 414 KFVIESSPSV---GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ IE SP + G LLNEVFE VE +L++PTFV DYPIEISPLA+ H ++ + +RFE
Sbjct: 349 EINIEISPKINTLGRLLNEVFEQKVESQLIEPTFVTDYPIEISPLARRHPKNKEMVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE+ANAFSEL DP+DQR R++ Q+ L+++ D
Sbjct: 409 LFIAGRELANAFSELIDPVDQRQRMQ-------------------LQQSLRDAGDLEAHC 449
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE GMPP G+G+GIDRLVMLLTNS+SIRDVI FP+LK
Sbjct: 450 -IDEDFLQALEIGMPPTGGLGIGIDRLVMLLTNSSSIRDVIPFPLLK 495
>gi|116071683|ref|ZP_01468951.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
gi|116065306|gb|EAU71064.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
Length = 502
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/519 (53%), Positives = 354/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L G PYA ++ +H +LQ + L NGEE V+VAGRV+
Sbjct: 4 LRDTRLEKATTLGELGQGPYALTFEPSHRMAELQADHADLPNGEERELS---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++GTIQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITSLVDAGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA +VS
Sbjct: 121 RGELSVKVRDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDERQFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE ++ V G I
Sbjct: 241 ERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYSDYIGMMELTESMIAEVCQQVCGGTHIH 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG +I L PWRR TMH LV+EATG++F + A+ GLE V
Sbjct: 301 YQGTDIDLTPPWRRATMHELVEEATGLNFEAFTTRAQAAEAMEAA----GLE-----VPG 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
++ SVG LLNE FE VE L+QPTFV DYPIEISPLA+ HR GL ERFELFI GRE
Sbjct: 352 AADSVGRLLNEAFEQRVEANLIQPTFVTDYPIEISPLARKHRSKPGLVERFELFIVGRET 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQR RLE Q ++AA E LD+DFV
Sbjct: 412 ANAFSELIDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVH 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+++
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMR 490
>gi|414873812|tpg|DAA52369.1| TPA: hypothetical protein ZEAMMB73_826365 [Zea mays]
Length = 335
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/337 (74%), Positives = 287/337 (85%), Gaps = 2/337 (0%)
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ES GF+EVETPVLQGAAGGAEARPF+TYHNSL RDLYLRIATELHLKRML+GG EK+YE
Sbjct: 1 MESFGFIEVETPVLQGAAGGAEARPFITYHNSLQRDLYLRIATELHLKRMLVGGLEKVYE 60
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA+A +GKL +DY+G E
Sbjct: 61 IGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTRCAMATHGKLKVDYEGTE 120
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LERPWRRETMH+LVKEATGIDFN G D++ AK G + N + +++ SV
Sbjct: 121 ISLERPWRRETMHSLVKEATGIDFNSFGQDVESAKRAVRGLPGFVVGNSESTSLQACSSV 180
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNEVFE VE LVQPTFVLDYP+EISPLAKPHR H GLTERFELFICGRE+ NAFS
Sbjct: 181 GHVLNEVFETFVESTLVQPTFVLDYPVEISPLAKPHRSHVGLTERFELFICGREIGNAFS 240
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
ELTDP+DQR+R E Q++QHN KRAA E S + + DD+SYEV+LD+DF+T+LEYG
Sbjct: 241 ELTDPIDQRSRFENQIKQHNAKRAAMAKEVKSTEG--EGDDDYSYEVSLDEDFLTSLEYG 298
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPPASGMGLGIDRLVMLLTNS+SIRDVIAFP+LKIQQ
Sbjct: 299 MPPASGMGLGIDRLVMLLTNSSSIRDVIAFPVLKIQQ 335
>gi|33862174|ref|NP_893735.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|39932077|sp|Q7UZP0.1|SYK_PROMP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33634392|emb|CAE20077.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 512
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/527 (51%), Positives = 364/527 (69%), Gaps = 46/527 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R+ K L KG EPYA + THS L E + +L NG++ N + V++AGRV+
Sbjct: 4 IREARLLKANSLVKKGFEPYAETFKITHSTKFLTEKFGYLENGQDFNLD---VAIAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSD--------QFDQLKVFVDIGDILGVSGS 173
A+R GK+AF T+ D G IQLY EK ++L D F+ LK VDIGD +GV G+
Sbjct: 61 AKRVMGKIAFYTIADQEGKIQLYLEK-KILDDFEIHAKLLSFEDLKEIVDIGDWIGVYGT 119
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
+K+T KGELS+ V+ + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+ R
Sbjct: 120 IKKTNKGELSIKVSKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPLSKNVFKTR 179
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
AK +S IR+ ++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKRM
Sbjct: 180 AKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKRM 239
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFEK+YE+GRIFRNEG+ST+HNPEFT++E+Y+A+S+Y MMN+TE+++ L+
Sbjct: 240 VVGGFEKVYELGRIFRNEGISTKHNPEFTSVEIYQAFSNYIDMMNLTEDLIRDIVLSCCD 299
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
L I+YQ I +PW+R +M ++V E TGIDF+ DL +A+ D E+
Sbjct: 300 SLIINYQEKVIDFSKPWKRISMKDVVMEYTGIDFDSFNGDLN-------KAMKDLEESN- 351
Query: 414 KFVIESSPSV---GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
IE SP + G LLNEVFE VE +LV+PTFV+DYPIEISPLA+PH + + +RFE
Sbjct: 352 ---IEISPKINTLGRLLNEVFEEKVESQLVEPTFVIDYPIEISPLARPHPENKEMVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE+ANAFSEL DP+DQR R++ Q+ L+++ D
Sbjct: 409 LFIAGRELANAFSELIDPVDQRKRMQ-------------------LQQSLRDAGDLEAH- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE GMPP G+G+GIDRL+MLLTNS SIRDVI FP+LK
Sbjct: 449 CIDEDFLQALEIGMPPTGGLGIGIDRLIMLLTNSPSIRDVITFPLLK 495
>gi|37522925|ref|NP_926302.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
gi|39932049|sp|Q7NG18.1|SYK_GLOVI RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|35213927|dbj|BAC91297.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
Length = 497
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/522 (52%), Positives = 356/522 (68%), Gaps = 37/522 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +R R++K E+ R PY Y+++RTH A LQ Y+ L NG+E D VSVAGR
Sbjct: 4 EDLRRTRLEKAEQWRVHNQNPYPYRYERTHMAGDLQAKYKDLENGQEVE---DAVSVAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL----SDQFDQLKVFVDIGDILGVSGSMK 175
+VARR G +AF L+DDSGTIQLY +K+R+ +D F L D GD +G G+++
Sbjct: 61 IVARRVLGSVAFFGLQDDSGTIQLYFDKKRIRESMGADAFKWLDKLTDTGDFIGAHGTIR 120
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RTE+GELSV V+ + +L KS+LPLP +Y+GLTDV KRYRQRY+D+I+ P V + FRKRA
Sbjct: 121 RTERGELSVYVHEYELLCKSILPLPSEYYGLTDVQKRYRQRYLDLIANPGVRETFRKRAL 180
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
IV EIR+ ++ GF+E+ETPVLQ AGGA ARPF T+HN+LG D++LRIATELHLKR+++
Sbjct: 181 IVREIRRFLDERGFLEIETPVLQTEAGGAAARPFTTHHNALGLDMFLRIATELHLKRLVV 240
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFEK+YE+GRIFRNEG+STRHNPEFTT+E+YEAYSDY +M++ E ++ A V G
Sbjct: 241 GGFEKVYELGRIFRNEGISTRHNPEFTTVEIYEAYSDYFDIMDLVETLLRAVAHIVLGST 300
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
+ +G I L P+RR TM +LV + TG+ L + K A+ A G+E
Sbjct: 301 ELVCEGNTIDLGAPFRRITMFDLVAQMTGVALAGLRDGEKAAR----LAEAVGVE----- 351
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+ + SVG +L ++FE E KL QPTFVLDYP+EISPLAK HR + ERFEL+I G
Sbjct: 352 -VTAGASVGQILYQLFEEKCEAKLTQPTFVLDYPVEISPLAKAHRSVPNMVERFELYING 410
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE A+ FSEL DP+DQRARLE AQ K K + D D+D
Sbjct: 411 RETADGFSELNDPVDQRARLE-------------------AQAKAKAAGDLEAH-PFDED 450
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+TA+E+G+PP G+G+GIDRLVMLLT+S SIRDVIAFP L+
Sbjct: 451 FLTAIEHGLPPTGGVGIGIDRLVMLLTDSPSIRDVIAFPTLR 492
>gi|119511071|ref|ZP_01630191.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
gi|119464322|gb|EAW45239.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
Length = 467
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/426 (61%), Positives = 309/426 (72%), Gaps = 29/426 (6%)
Query: 152 SDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDK 211
+D F LK D GDILGV G++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV K
Sbjct: 6 ADAFSHLKQLTDAGDILGVKGTIKRTEKGELSVYVKEYSILTKSLLPLPDKWHGLTDVAK 65
Query: 212 RYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVT 271
RYRQRYVD+I PEV FR+RA+I + IR+ + F+E+ETPVLQ AGGA+ARPFVT
Sbjct: 66 RYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLTERDFLEIETPVLQSEAGGADARPFVT 125
Query: 272 YHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYS 331
YHN+L LYLRIATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+
Sbjct: 126 YHNTLDMQLYLRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYA 185
Query: 332 DYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELG 391
DY MM +TE I+T A V G L I YQG I L PWRR TMH+LVKE TG+DFN
Sbjct: 186 DYHDMMALTEGIITTVAQEVLGTLQITYQGTPIDLSAPWRRVTMHDLVKEYTGLDFNSFS 245
Query: 392 NDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIE 451
L+ AK + A GL IE PS+G LLN FE +E L+QPTFV+DYP+E
Sbjct: 246 T-LEEAKAASKNA---GLHG-----IEDVPSMGKLLNAAFEQKIEENLIQPTFVIDYPVE 296
Query: 452 ISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVS 511
ISPLAKPHR GL ERFELFI GRE AN+FSELTDP+DQR RLE
Sbjct: 297 ISPLAKPHRSQPGLVERFELFIVGRETANSFSELTDPVDQRERLE--------------- 341
Query: 512 EKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVI 571
AQ LK + D + +D+DF+TALEYGMPP G+G+GIDRLVMLLT+ ASIRD I
Sbjct: 342 ----AQAALKAAGDLEAQ-GVDEDFITALEYGMPPTGGLGIGIDRLVMLLTDCASIRDAI 396
Query: 572 AFPILK 577
AFP+LK
Sbjct: 397 AFPLLK 402
>gi|333922405|ref|YP_004495985.1| Lysyl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747966|gb|AEF93073.1| Lysyl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 509
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/529 (49%), Positives = 359/529 (67%), Gaps = 39/529 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A + + D + +R +K+ EL S+G++PY K++RTH + + +
Sbjct: 17 AEAGQNNVEDLNELMKVRREKLNELISQGIDPYGQKFERTHLTADIINNFAAM------- 69
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
E V +AGR++A+R GK +F L+D +G IQ+Y + L ++++ + + +DIGDI+
Sbjct: 70 -EGQAVVIAGRIMAKRVMGKASFANLQDSAGNIQIYARLDDLGAEEYSRFEK-LDIGDII 127
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
G SG + +T KGE++V + + +L KSL PLP+K+HGL DVD RYRQRYVD+I PEV
Sbjct: 128 GCSGKVFKTRKGEITVHIEKYTMLAKSLRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQ 187
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R++IV IR ++ GF+EVETP++ AGGA ARPF+T+HN+L +LY+RIA EL
Sbjct: 188 TFVIRSRIVRAIRNYLDQRGFLEVETPMMHPIAGGASARPFITHHNALDMNLYMRIAPEL 247
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+L+GGF+K+YEI R FRNEG+ST+HNPEFT++E+Y+AY DY MM++TE++++H A
Sbjct: 248 YLKRLLVGGFDKVYEINRNFRNEGISTKHNPEFTSLELYQAYGDYHDMMDLTEDLISHVA 307
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G T++Y+GVEI L +PWRR M +VKE +G+DF +L +D + A + A G G
Sbjct: 308 REVLGTTTVEYEGVEISLAKPWRRVPMLEIVKEHSGLDFTQLKDD-QAAYDA---AKGLG 363
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
LE IE G++LN VFE +VE KL+QPTFV+DYP+EISPLAK H+ H LT R
Sbjct: 364 LE------IEPGAKWGDILNTVFEEMVEEKLIQPTFVIDYPVEISPLAKRHKEHPELTYR 417
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANAFSEL DP+DQ+ R QV EKR A E
Sbjct: 418 FELFIYGREMANAFSELNDPIDQKGRFLAQV----EKREAGDDEAQ-------------- 459
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFV ALEYGMPPA G+G+GIDRLVMLLTNS+SIRDVI FP+++
Sbjct: 460 --MYDEDFVQALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILFPLMR 506
>gi|323703647|ref|ZP_08115289.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531362|gb|EGB21259.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 509
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/529 (49%), Positives = 359/529 (67%), Gaps = 39/529 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A + + D + +R +K+ EL S+G++PY K++RTH + + +
Sbjct: 17 AEAGQNNVEDLNELMKVRREKLNELISQGIDPYGQKFERTHLTADIINNFAAM------- 69
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
E V +AGR++A+R GK +F L+D +G IQ+Y + L ++++ + + +DIGDI+
Sbjct: 70 -EGQTVVIAGRIMAKRVMGKASFANLQDSAGNIQIYARLDDLGAEEYSRFEK-LDIGDII 127
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
G SG + +T KGE++V + + +L KSL PLP+K+HGL DVD RYRQRYVD+I PEV
Sbjct: 128 GCSGKVFKTRKGEITVHIEKYTMLAKSLRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQ 187
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R++IV IR ++ GF+EVETP++ AGGA ARPF+T+HN+L +LY+RIA EL
Sbjct: 188 TFVIRSRIVRAIRNYLDQRGFLEVETPMMHPIAGGASARPFITHHNALDMNLYMRIAPEL 247
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+L+GGF+K+YEI R FRNEG+ST+HNPEFT++E+Y+AY DY MM++TE++++H A
Sbjct: 248 YLKRLLVGGFDKVYEINRNFRNEGISTKHNPEFTSLELYQAYGDYHDMMDLTEDLISHVA 307
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G T++Y+GVEI L +PWRR M +VKE +G+DF +L +D + A + A G G
Sbjct: 308 REVLGTTTLEYEGVEISLAKPWRRVPMLEIVKEHSGLDFTQLKDD-QAAYDA---AKGLG 363
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
LE IE G++LN VFE +VE KL+QPTFV+DYP+EISPLAK H+ H LT R
Sbjct: 364 LE------IEPGAKWGDILNTVFEEMVEEKLIQPTFVIDYPVEISPLAKRHKEHPELTYR 417
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANAFSEL DP+DQ+ R QV EKR A E
Sbjct: 418 FELFIYGREMANAFSELNDPIDQKGRFLAQV----EKREAGDDEAQ-------------- 459
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFV ALEYGMPPA G+G+GIDRLVMLLTNS+SIRDVI FP+++
Sbjct: 460 --MYDEDFVQALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILFPLMR 506
>gi|427703450|ref|YP_007046672.1| lysyl-tRNA synthetase [Cyanobium gracile PCC 6307]
gi|427346618|gb|AFY29331.1| lysyl-tRNA synthetase (class II) [Cyanobium gracile PCC 6307]
Length = 506
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/522 (50%), Positives = 347/522 (66%), Gaps = 38/522 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L + G PYA + +H +LQ+ + L NGEE +
Sbjct: 4 LRETRLEKARSLEALGRAPYALGFAPSHRTAELQQAHADLPNGEERAVAVAVAGRV---M 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS------DQFDQLKVFVDIGDILGVSGSMK 175
RR GKLAF T+ D+SG IQL+ EK LL+ + F Q+ VD GD +GV GS++
Sbjct: 61 TRRVMGKLAFFTIADESGPIQLFIEKAALLAAHPEEPEAFAQITSLVDGGDWIGVHGSLR 120
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RT++GELSV V+ +V+L+K+L PLPDK+HGL DV+KRYRQRY+D+I P + FR+RA+
Sbjct: 121 RTDRGELSVKVSDWVMLSKALQPLPDKWHGLADVEKRYRQRYLDLIVSPHTRETFRRRAR 180
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
+VS +R+ ++ F+E+ETPVLQ AGGA+ARPF T+HN+L L LRIATELHLKR+++
Sbjct: 181 LVSAMRRWLDERDFLEIETPVLQTEAGGADARPFATHHNALDLPLTLRIATELHLKRLVV 240
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+A++DY +MM++TE+++ L V G
Sbjct: 241 GGFERVYELGRIFRNEGVSTRHNPEFTSVEIYQAFADYHTMMDLTEQLLAAACLEVCGDT 300
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I YQG EI L PWRR TMH LV++ATG+DF+ + +
Sbjct: 301 RITYQGAEIDLTPPWRRVTMHELVEQATGLDFSGFSDRAEAVAAME---------AAGLA 351
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E++ SVG LL E FE VE LVQPTFV+DYP+E SPLA+ HR GL ERFELFI G
Sbjct: 352 APEAADSVGRLLVEAFEQAVETTLVQPTFVMDYPVENSPLARAHRSKPGLVERFELFIVG 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE ANAFSEL DPLDQRARLE Q +R A E T+D+D
Sbjct: 412 RETANAFSELIDPLDQRARLELQ----QLRRQAGDPEAQ----------------TVDED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE GMPP G+G+GIDRL MLLT+S SIRDVIAFP+L+
Sbjct: 452 FLHALEVGMPPTGGLGIGIDRLAMLLTDSPSIRDVIAFPLLR 493
>gi|452822049|gb|EME29072.1| lysyl-tRNA synthetase, class II [Galdieria sulphuraria]
Length = 519
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/534 (51%), Positives = 356/534 (66%), Gaps = 49/534 (9%)
Query: 61 AVRALRIKKVEELRSKGLEPYA-------YKW----------DRTHSANQLQEIYRHLAN 103
A+R R+ K++ L++ G YA + + ++TH+A +LQ Y +L+
Sbjct: 16 ALRKQRMDKLKALQTAGFSTYALIDGELTFSFSQSYSTLMIRNKTHNALELQTTYDYLSP 75
Query: 104 GEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVD 163
GE+ +S AGR+ ++R FGKL FLT+ DDSG+IQLY E++ L D F +K VD
Sbjct: 76 GEQVT--QVQISFAGRIKSKRTFGKLMFLTVEDDSGSIQLYVEQQTL-KDSFRYIKSLVD 132
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
IGDI+GV G +KRT+KGELS++V + +L KSLL LPDK+HGL DV+KRYR R++DMI
Sbjct: 133 IGDIVGVQGCIKRTDKGELSIVVEDWQMLAKSLLSLPDKFHGLMDVEKRYRLRHLDMIVH 192
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
P V + ++RA+IVS IR+ +E F+EVETP L AGGA+A PFVTYH +L L LR
Sbjct: 193 PSVRQILKQRAQIVSTIREFLERKQFMEVETPALHCIAGGADASPFVTYHEALDLQLTLR 252
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IATEL LKR ++GGFEK+YEIGR+FRNEG+STRHNPEFT++E+YEAY DYQ MMN+TEE+
Sbjct: 253 IATELFLKRCIVGGFEKVYEIGRVFRNEGISTRHNPEFTSLELYEAYKDYQDMMNLTEEL 312
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR 403
+ A V G I Y I L P+RR TM+ LVKE G+D D++ AK +
Sbjct: 313 IKTVANQVCGTTEIVYMEERIQLGAPFRRVTMNELVKETLGLDILSF-PDIETAKSAVEK 371
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+ + +++ D S S+G LL+ FE E L+QPTFVLDYPIEISPLAK HR+
Sbjct: 372 KMEESMKDWD-----SIDSLGKLLSSCFEHYCEKLLIQPTFVLDYPIEISPLAKQHRKDP 426
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
LTERFEL+I GRE+ANAFSEL DP++QR R +Q+ H ++ KE
Sbjct: 427 RLTERFELYIAGRELANAFSELNDPIEQRERFMKQL--HGSEQVG------------KE- 471
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LD+DF+ ALE GMPP GMG+GIDRLVMLLTNS+SIR VIAFP+LK
Sbjct: 472 --------LDEDFLLALEQGMPPTGGMGMGIDRLVMLLTNSSSIRQVIAFPLLK 517
>gi|333980541|ref|YP_004518486.1| lysyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824022|gb|AEG16685.1| Lysyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 497
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/516 (50%), Positives = 353/516 (68%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K+EEL+++G+EPY ++ RTH A + + Y E V +AGR++ARR
Sbjct: 20 VRLEKLEELKAQGIEPYGGRYPRTHLAAWIIDHY--------EECEGQKVCIAGRLMARR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F LRD SG IQ+Y + ++ ++ + +DIGDI+GV G + +T GE++V
Sbjct: 72 GHGKASFGNLRDGSGQIQIYLRLNDVGAETYNLFQR-LDIGDIIGVRGKVFKTRTGEITV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L KSL PLP+K+HGL DVD RYRQRY+D+I PEV + F R++++ IR +
Sbjct: 131 AVEELTLLAKSLRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKNTFIIRSRVIHAIRNFL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP++ AGGA ARPF+T+HN+L +LYLRIA EL+LKR+L+GGFEK+YEI
Sbjct: 191 ERRGFLEVETPMMHPIAGGAAARPFITHHNALDMNLYLRIAPELYLKRLLVGGFEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ST+HNPEFT +E+Y+AY+DY MM++TEE+++ A V G T+ YQGVEI
Sbjct: 251 NRNFRNEGISTKHNPEFTMLELYQAYADYHDMMDLTEEMISTVASEVLGTTTVTYQGVEI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW+R+TM VKE TG+DFN+ +D + A+ R LG +E KD S G
Sbjct: 311 NLAPPWKRQTMLEAVKEHTGLDFNQYRDDGERARRAA-RELGVEVEEKD--------SWG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN+VFE VEP+L+QP F++DYPIEISPLAK LT RFELFI REMANAFSE
Sbjct: 362 TVLNKVFEEKVEPQLIQPVFIMDYPIEISPLAKRKTEDPALTYRFELFIYAREMANAFSE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+AR +QV EKR A E +D+D++TALEYGM
Sbjct: 422 LNDPIDQKARFLKQV----EKRRAGDEEAH----------------MMDEDYITALEYGM 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PPA G+G+GIDRLVMLLT+S SIRDVI FP+++ ++
Sbjct: 462 PPAGGLGIGIDRLVMLLTDSPSIRDVILFPLMRPKE 497
>gi|134298053|ref|YP_001111549.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|134050753|gb|ABO48724.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 510
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/527 (48%), Positives = 359/527 (68%), Gaps = 39/527 (7%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ T D + +R +K++EL ++G++P+ K++ TH + E + + E
Sbjct: 19 AGQTMLEDLNELMKVRREKLQELINQGIQPFGEKFEVTHYTFDITERFEEM--------E 70
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
V++AGR+ A+R GK +F ++D G IQ+Y L ++++ +L+ +DIGDI+G
Sbjct: 71 GQTVTIAGRITAKRVMGKASFANIQDSRGNIQVYARLNDLGAEEYARLEK-LDIGDIIGC 129
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + RT KGE++V ++S+ +L+KSL PLP+K+HGL DVD RYRQRYVD+I PEV F
Sbjct: 130 YGKVFRTRKGEITVHIDSYKLLSKSLRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQTF 189
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+++V IR ++ GF+EVETP++ AGGA ARPF+T+HN+L +LY+RIA EL+L
Sbjct: 190 ITRSRVVRGIRNYLDQRGFLEVETPMMHPIAGGASARPFITHHNTLDMNLYMRIAPELYL 249
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+L+GGF+K+YEI R FRNEG+STRHNPEFTTIE+Y+AY+DY MM++TE++++ A
Sbjct: 250 KRLLVGGFDKVYEINRNFRNEGISTRHNPEFTTIELYQAYADYNDMMDLTEDLISQVAQD 309
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G ++Y+GVEI L +PWRR M +VKE +G+DF++ LK AKE A G GL+
Sbjct: 310 VLGTTMVEYEGVEISLAKPWRRVPMLEIVKEHSGLDFSQ----LKDAKEAFEAAKGLGLD 365
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+E S S G++LN VFE VE KL+QPTFV+DYP++ISPLAK + + LT RFE
Sbjct: 366 ------VEPSASWGDILNTVFEEKVEDKLIQPTFVIDYPVDISPLAKRQQENPELTYRFE 419
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE+ANAFSEL DP+DQ+ R QV EKR A E
Sbjct: 420 LFIYGRELANAFSELNDPIDQKGRFMSQV----EKRNAGDEEAQ---------------- 459
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALEYGMPPA G+G+GIDRLVMLLTNS+SIRDVI FP+++
Sbjct: 460 MYDEDFIQALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILFPLMR 506
>gi|258513605|ref|YP_003189827.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777310|gb|ACV61204.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 499
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/527 (49%), Positives = 358/527 (67%), Gaps = 38/527 (7%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
SS+ + ++ + +R +K++EL KG PY K+DR H + ++ + N E+ E
Sbjct: 8 SSAENLNELSELMRVRREKLQELIDKGYHPYGDKYDRLHCSAEI------INNFEQY--E 59
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
VSVAGR++A+R GK F L+D +G+IQ+Y L S+ ++ + +DIGDI+GV
Sbjct: 60 GQEVSVAGRLMAKRGHGKAGFANLQDTAGSIQVYGRLNNLGSEDYELFQK-LDIGDIIGV 118
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + RT+KGE++V + +L+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV + F
Sbjct: 119 KGKVFRTQKGEITVEIQVLTLLSKSLRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKNQF 178
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R++IV IR ++ GF+EVETP++Q AGGA ARPF+T+HN+L +LYLRIA EL+L
Sbjct: 179 VARSQIVRCIRNLLDEKGFLEVETPMMQSIAGGAAARPFITHHNALDMELYLRIAPELYL 238
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+L+GGF+K+YEI R FRNEG+ST+HNPEFT +E+Y+AY+DY MM + E +V + +L
Sbjct: 239 KRLLVGGFDKVYEINRNFRNEGISTKHNPEFTMLELYQAYADYYDMMEMAEYLVYNTSLR 298
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
VNG I YQ EI L PW R M VK+ +G+DF+ L +D + K LG
Sbjct: 299 VNGTPVISYQEQEINLVPPWNRMPMLEAVKKYSGLDFSMLKSDQEAVKAAQGLGLG---- 354
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
V++ S + G +LN+VFE +VEPKL+QPTF++DYP+EISPLAK A LT RFE
Sbjct: 355 -----VVQPSDTWGEVLNKVFEEMVEPKLIQPTFIIDYPVEISPLAKKKDDDASLTYRFE 409
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GREMANAFSEL DP+DQ+AR ++QV Q + DD ++
Sbjct: 410 LFIYGREMANAFSELNDPIDQKARFQKQVEQR------------------RSGDDEAH-- 449
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+D++ ALEYGMPPA G+G+GIDRLVMLLTN+ASIRD+I FP+LK
Sbjct: 450 MMDEDYIQALEYGMPPAGGLGIGIDRLVMLLTNAASIRDIILFPLLK 496
>gi|334338858|ref|YP_004543838.1| lysyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090212|gb|AEG58552.1| lysyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 508
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/527 (48%), Positives = 350/527 (66%), Gaps = 39/527 (7%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ + D + +R +K+ EL ++G+EPY K+ RTH A +I +H +
Sbjct: 18 AGQSVAEDLNELMKVRREKLHELANQGIEPYGEKFQRTHYA---ADIIQHF-----EAMD 69
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
+AGR++A+R GK +F L+D SG IQ+Y + L +++ + +DIGDI+G
Sbjct: 70 GQPAVLAGRIMAKRVMGKASFANLQDSSGNIQIYVRLDELGPEEYACFEK-LDIGDIIGC 128
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG + RT KGE+++ ++S+ IL+KSL PLP+K+HGL DVD RYRQRYVD+I PEV F
Sbjct: 129 SGKVFRTRKGEITLHIDSYKILSKSLRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQAF 188
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+K+V IR ++ GF+EVETP++ AGGA ARPF TYHN+L LY+RIA EL+L
Sbjct: 189 ITRSKVVRSIRNYLDEKGFLEVETPMMHPIAGGASARPFTTYHNTLDMKLYMRIAPELYL 248
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+L+GGF+K+YEI R FRNEG+ST+HNPEFTTIE+Y+AY+DY+ MM++TE++++ A
Sbjct: 249 KRLLVGGFDKVYEINRNFRNEGISTKHNPEFTTIELYQAYADYEVMMDLTEDLISQVAQE 308
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G T++Y+GV +CL +PWRR M +VKE +G+DF +L D A +
Sbjct: 309 VLGTTTVEYEGVTLCLAKPWRRVPMLEIVKEYSGLDFTQL-KDADAAYQAA--------- 358
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
K IE S G++LN VFE VE KL+QPTF++DYP++ISPLAK + LT RFE
Sbjct: 359 KKLNLDIEPGASWGDILNVVFEEKVEDKLIQPTFIIDYPVDISPLAKRQKEQPELTYRFE 418
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GREMANAFSEL DP+DQ+ R QV EKR A E
Sbjct: 419 LFIYGREMANAFSELNDPIDQKGRFLAQV----EKRNAGDDEAQ---------------- 458
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+D++ ALEYGMPPA G+G+GIDRLVMLLTNS+SIRDVI FP+++
Sbjct: 459 MYDEDYIQALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILFPLMR 505
>gi|78044571|ref|YP_361162.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
gi|123756728|sp|Q3A9M2.1|SYK_CARHZ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|77996686|gb|ABB15585.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
Length = 488
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/515 (49%), Positives = 352/515 (68%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K+ ELR G+EPY K++RTH+A ++ + + L + V +AGR++A+R
Sbjct: 12 VRLEKLSELRKMGIEPYGGKFERTHTAKEILDNFEQLVD--------KTVKIAGRIMAKR 63
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK +F ++D SG IQ+Y + L D + K+F +DIGDI+GV+G + +T+KGE+
Sbjct: 64 GHGKASFAHIQDMSGKIQIYARQNELGIDAY---KLFEKLDIGDIIGVTGHVFKTQKGEI 120
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
+V ++SF IL KSL PLP+K+HGLTDV+ RYRQRYVD+I PEV + F R++IV IR+
Sbjct: 121 TVWLSSFEILAKSLRPLPEKWHGLTDVELRYRQRYVDLIVNPEVRETFILRSRIVKTIRE 180
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ GF+EVETP++ AGGA ARPF+T+HN+L LYLRIA EL+LKR+L+GGFEK+Y
Sbjct: 181 FLDQKGFLEVETPMMHPIAGGAAARPFITHHNALDMKLYLRIAPELYLKRLLVGGFEKVY 240
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EI R FRNEG+ST+HNPEFT +E+Y+AY+DY MM+ITEE++TH A V G L I YQG
Sbjct: 241 EINRNFRNEGISTKHNPEFTMLELYQAYADYHDMMDITEELITHVAEKVLGTLEITYQGT 300
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
I L RPW+R M ++EATG+DF + + ++ + + LG +E
Sbjct: 301 PINLHRPWKRIPMLKAIEEATGVDFAGVKDPVQAYAKA--KELG--------VPVEEGMG 350
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G ++ VFE VEP L+ PTFV+DYP+E+SPLAK + + LT RFELFI GREMANAF
Sbjct: 351 WGEIITAVFEEKVEPTLINPTFVIDYPVEVSPLAKRQKENPDLTYRFELFIYGREMANAF 410
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R +Q+ E RA E +D+D++TALEY
Sbjct: 411 SELNDPIDQKERFLKQL----EARAKGNEEAH----------------MMDEDYITALEY 450
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPPA G+G+GIDRLVMLLT+ ASIRDVI FP+++
Sbjct: 451 GMPPAGGLGIGIDRLVMLLTDQASIRDVILFPLMR 485
>gi|406981099|gb|EKE02618.1| hypothetical protein ACD_20C00356G0002 [uncultured bacterium]
Length = 509
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/519 (49%), Positives = 356/519 (68%), Gaps = 37/519 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +R +R++K+ +L K + PY Y +DRT SA +L E Y L +GEE ++ +VAGR
Sbjct: 11 ETLRNIRLQKLNDLVDKMINPYPYTFDRTASAKELHEKYAELQSGEEVG---EYYNVAGR 67
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++A R G F+ L D SG IQL+ K+ + ++ + LK+ +D+GDI+G SG+++RT +
Sbjct: 68 IMAMRNSG--MFIDLMDSSGKIQLFTHKDNVPEEKIEILKL-LDVGDIIGASGTIRRTPR 124
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ V F IL K+LLPLP+K+HGLTDV+ RYRQRY+DMI PEV D F KR+ I+ E
Sbjct: 125 GELSLKVKDFKILAKTLLPLPEKWHGLTDVETRYRQRYLDMIVNPEVRDTFYKRSMIIKE 184
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF- 298
IR + GF+EVETP+LQ AGGA ARPF TYHN+L +++LRIA ELHLKR+++GG
Sbjct: 185 IRDYLTGHGFLEVETPMLQTIAGGAAARPFNTYHNALDMEMHLRIAPELHLKRLMVGGLS 244
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
EKI+EI R FRNEG+S +HNPEFT +E+Y+AY DY MM +TE +++H A G + ID
Sbjct: 245 EKIFEINRNFRNEGISPKHNPEFTMLELYQAYVDYNEMMVLTENLISHVAQKALGTMIID 304
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG I L PW+R TM +K+ T +DF+++ + + A+ A G+E I
Sbjct: 305 YQGKHIDLTPPWQRLTMTGAIKKYTDVDFSQMLSQPEAAEA----AENLGVE------IN 354
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ S G +L++VFE VEP L+QP ++DYP +ISPL+KPHR + L ERFE + G E+
Sbjct: 355 ENDSWGKILDKVFEDKVEPHLIQPVHIIDYPRDISPLSKPHRDNPRLVERFETRVNGWEI 414
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSELTDP+DQ+ R E+Q+ N D+ ++E LD+D++T
Sbjct: 415 ANAFSELTDPIDQKRRFEQQLEAKN------------------AGDEEAHE--LDEDYIT 454
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPPA G+G+GIDRL+MLLTNSASIRDVIAFP ++
Sbjct: 455 ALEYGMPPAGGLGVGIDRLIMLLTNSASIRDVIAFPTMR 493
>gi|147676598|ref|YP_001210813.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|259511529|sp|A5D5Q4.1|SYK_PELTS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|146272695|dbj|BAF58444.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 506
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/528 (49%), Positives = 354/528 (67%), Gaps = 41/528 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
+S D + +R +K+ ELR KG+EPY +++RTH+A + + + + EN
Sbjct: 15 ASGREEDLNELMRVRREKLAELRDKGIEPYGGRFERTHTARYILDNFVEM--------EN 66
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V +AGR+++RR GK F ++D +G IQ+Y + + + +L +DIGDI+GV
Sbjct: 67 RPVVIAGRIMSRRGMGKATFAHIQDGTGQIQIYVRLNDVGPESY-ELFGRLDIGDIIGVQ 125
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
GS+ +T GE++V SF IL+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV +VF
Sbjct: 126 GSVFKTRMGEITVAAESFKILSKSLRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKEVFE 185
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+ R ++ GF+EVETP++Q GGA ARPF+T+HN+L DLYLRIA EL+LK
Sbjct: 186 TRSKIIRACRNFLDGKGFLEVETPMMQVIPGGAAARPFITHHNALDMDLYLRIAPELYLK 245
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+L+GGFEK+YEI R FRNEG+ST+HNPEFT +E+Y+AY+DY MMN+TEE+++ A+
Sbjct: 246 RLLVGGFEKVYEINRNFRNEGISTKHNPEFTMLELYQAYADYTDMMNLTEELISAVAVEA 305
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKET--TLRALGDGL 409
G I+YQG EI L PW R M +K G+DF LK A+E + G GL
Sbjct: 306 LGTTKIEYQGTEIDLAPPWPRIPMLETIKVHAGLDFGA----LKSAEEAFKAVEQAGIGL 361
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
E ++ S S G ++N+VFE VVEPKL+QPTFV+DYP+EISPLAK LT RF
Sbjct: 362 E------LDPSDSWGTIVNKVFEEVVEPKLIQPTFVVDYPVEISPLAKRKAEDPELTYRF 415
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
ELFI GRE+ANAFSEL DP+DQ+ R +QV EK K D+ ++
Sbjct: 416 ELFIYGREIANAFSELNDPIDQKGRFLKQV------------------EKRKAGDEEAH- 456
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+D++ ALEYGMPPA G+G+GIDRLVMLLTNSASIRDVI FP++K
Sbjct: 457 -MMDEDYINALEYGMPPAGGLGIGIDRLVMLLTNSASIRDVILFPLMK 503
>gi|414154469|ref|ZP_11410788.1| Lysine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454260|emb|CCO08692.1| Lysine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 509
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/530 (49%), Positives = 359/530 (67%), Gaps = 41/530 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A++ D + +R +K++EL ++G++PY K+ RTH+A + + S
Sbjct: 16 AAAGQPMAEDLNELMRVRREKLQELINQGIDPYGEKFRRTHNALDIINNF--------SA 67
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V +AGR++A+R GK +F L+D +G IQ+Y + L ++ + + + +DIGDI+
Sbjct: 68 MDGQAVVIAGRIMAKRIMGKASFANLQDATGNIQIYSRLDDLGAEDYARFEK-LDIGDII 126
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
G +G + +T KGE++V ++S+ IL+KSL PLP+K+HGL DVD RYRQRYVD+I PEV
Sbjct: 127 GCAGKVFKTRKGEITVHIDSYKILSKSLRPLPEKWHGLRDVDLRYRQRYVDLIVNPEVKQ 186
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R+K+V IR ++ GF+EVETP++ AGGA ARPF+T+HN+L LY+RIA EL
Sbjct: 187 TFVIRSKVVRAIRNYLDQRGFLEVETPMMHPIAGGASARPFITHHNALDMKLYMRIAPEL 246
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+L+GGF+K+YEI R FRNEG+ST+HNPEFT IE+Y+AY+DYQ MM++TE+++++ A
Sbjct: 247 YLKRLLVGGFDKVYEINRNFRNEGISTKHNPEFTMIELYQAYADYQDMMDLTEDLISNVA 306
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNEL-GNDLKVAKETTLRALGD 407
V G T+ Y+GVEI L +PWRR M +VKE +G+DFN+L G + A +L
Sbjct: 307 AEVLGTTTVLYEGVEINLAKPWRRVPMLEIVKEHSGLDFNQLKGAEAARAAARSL----- 361
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
GLE IE S G++LN VFE VE KLVQPTFV+DYP++ISPLAK + + LT
Sbjct: 362 GLE------IEPGASWGDVLNTVFEEKVEDKLVQPTFVIDYPVDISPLAKRQKENPELTY 415
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFELFI GREMANAFSEL DP+DQ+ R QV EKR A E
Sbjct: 416 RFELFIYGREMANAFSELNDPIDQKGRFLAQV----EKRKAGDEEAQ------------- 458
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+D++ ALEYGMPPA G+G+GIDRLVMLLTNS SIRDVI FP+++
Sbjct: 459 ---MYDEDYIQALEYGMPPAGGLGIGIDRLVMLLTNSPSIRDVILFPLMR 505
>gi|302388757|ref|YP_003824578.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302199385|gb|ADL06955.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 490
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/518 (50%), Positives = 350/518 (67%), Gaps = 40/518 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++K+EELRS G+ PY K+ RTH+ +++E + L E S+AGR
Sbjct: 10 EIIRA-RLQKLEELRSMGIAPYGQKYVRTHNCLEIKENFEKL--------EGSETSIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++A R GK AF ++D+ G +Q+Y +K+ + + ++ K +DIGDI+GV G + +T+K
Sbjct: 61 IMAIRGHGKAAFFDIQDEKGRLQIYIKKDHVGDEVYEIFKK-LDIGDIIGVEGKIFKTQK 119
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE+SV+ + +L KSL PLP+K+HGL DVD RYRQRY+D+I P+V F R+KI+
Sbjct: 120 GEISVMADRITVLAKSLRPLPEKWHGLKDVDTRYRQRYLDLIVNPDVRRTFVTRSKIIRA 179
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR ++S GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL+LKR+++GGFE
Sbjct: 180 IRNYLDSRGFIEVETPVLTPLAGGAAARPFITHHNALDIDLYLRIATELYLKRLIVGGFE 239
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIG+ FRNEG+S +HNPEFT IE+Y+AY+DYQ MM +TE++++H A V G + Y
Sbjct: 240 KVYEIGKDFRNEGISIKHNPEFTMIELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVY 299
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG EI L PW R TM VK+ G+DFNEL D +E A GLE D
Sbjct: 300 QGEEIDLTPPWTRMTMVEAVKKYAGVDFNELKTD----EEARAVARKLGLEVGD------ 349
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ + G +LN +FE VE LVQPTF+LDYPIEISPLAK + T RFELFI RE A
Sbjct: 350 NDTRGKVLNTIFEEKVEEHLVQPTFILDYPIEISPLAKRKEDNPDFTYRFELFITRRETA 409
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP+DQR R +Q++ E+ + E+ H++ D+DF+ A
Sbjct: 410 NAFSELNDPIDQRERFLQQLK-----------EREAGDEEA-----HAF----DEDFINA 449
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPP G+G+GIDRLVMLLT+S SIRDVI FP ++
Sbjct: 450 LEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILFPTMR 487
>gi|332798251|ref|YP_004459750.1| Lysyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|438001170|ref|YP_007270913.1| Lysyl-tRNA synthetase (class II) [Tepidanaerobacter acetatoxydans
Re1]
gi|332695986|gb|AEE90443.1| Lysyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|432177964|emb|CCP24937.1| Lysyl-tRNA synthetase (class II) [Tepidanaerobacter acetatoxydans
Re1]
Length = 493
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/527 (47%), Positives = 352/527 (66%), Gaps = 44/527 (8%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S+ ++ +R++K++EL+ G+ P+ K+ +H+ Q++ + L EN +V +
Sbjct: 8 SEINEIQKVRLQKLQELKDMGVNPFGDKYPYSHNCQQIKANFDEL--------ENQNVKI 59
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++A R GK AF ++D++G IQ+Y K+ + D F+ K+ +DIGDI+G+ G++ +
Sbjct: 60 AGRIMAIRGHGKAAFFDIQDNTGKIQVYIRKDNVSDDTFNLYKL-LDIGDIVGIEGNVFK 118
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
+++GE+SV VN+ IL KSL PLP+K+HGL D D RYRQRY+D+I PEV F R+KI
Sbjct: 119 SKRGEISVSVNNMTILAKSLRPLPEKWHGLKDTDIRYRQRYLDLIVNPEVKQTFLTRSKI 178
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S +R+ ++ GFVEVETPVL AGGA ARPFVTYHN+L LYLRIATEL+LKR+++G
Sbjct: 179 ISAMRQFLDDKGFVEVETPVLSPIAGGAAARPFVTYHNALDMQLYLRIATELYLKRLIVG 238
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
GFEK+YE+G+ FRNEG+S +HNPEFT +E+Y+AY+DY+ MM + E+++ + A V G
Sbjct: 239 GFEKVYELGKDFRNEGISIKHNPEFTMVELYQAYADYKDMMKLAEDMIAYIAEKVLGTTK 298
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKD 413
I YQG EI L PW R TM VK TGIDF+ + +D KVA+E + + D
Sbjct: 299 ITYQGEEIDLTPPWTRMTMVEAVKHFTGIDFDSIASDEEARKVARELHIEEIKD------ 352
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
+ G +LN +FE VE LVQPTF+ DYPIEISPLAK + LT RFE F+
Sbjct: 353 ------CDTKGKVLNLIFEEKVEQNLVQPTFIYDYPIEISPLAKKKEDNPDLTYRFEAFV 406
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE+ANAFSEL DP+DQR R +Q+++ R A E H++ D
Sbjct: 407 TGREIANAFSELNDPIDQRERFLQQLKE----REAGDEEA------------HAF----D 446
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+D++ ALEYGMPP GMG+G+DRLVMLLT+S SIRDVI FP ++ +Q
Sbjct: 447 EDYINALEYGMPPTGGMGIGVDRLVMLLTDSYSIRDVILFPTMRPKQ 493
>gi|159466544|ref|XP_001691469.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
gi|158279441|gb|EDP05202.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
Length = 551
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/543 (50%), Positives = 365/543 (67%), Gaps = 21/543 (3%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE 105
++ + S S E VRA+R++KVEELR +G EPYAY++DRTH +LQE + L NG
Sbjct: 19 QQKGGKPAQSASSPEEVRAVRLQKVEELRGQGQEPYAYRFDRTHFTTELQEQFAALENGA 78
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFV 162
S VSVAGRVVA+R GKL+FL+LRDD G IQLY EK L + Q FD +K V
Sbjct: 79 HDES-GAVVSVAGRVVAKRVMGKLSFLSLRDDKGQIQLYVEKAGLDAQQPGGFDLVKGLV 137
Query: 163 DIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIS 222
D+GDI+G +G +KRT+KGELSV+ +L K L+ DK G+ + R R+ +
Sbjct: 138 DVGDIVGCTGGLKRTDKGELSVVATGLQVLAKPLMTRADKPLGIEEAGGRGREEGGERT- 196
Query: 223 KPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYL 282
V D FR R+KI+S IR+ +E GF+EVETPVL+ AGGA+ARPF T+HN+L RD L
Sbjct: 197 ---VRDTFRARSKIISCIRRQLEDRGFLEVETPVLESVAGGADARPFRTFHNTLRRDFTL 253
Query: 283 RIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEE 342
RIATELHLKR+++GGFE+++E+GRIFRNEG+S+RHNPEFT++E+Y+ + +++ I E
Sbjct: 254 RIATELHLKRLVVGGFERVFELGRIFRNEGVSSRHNPEFTSVEIYQKTEWHSTVVPIAEV 313
Query: 343 IVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEAT-GIDFNEL---GNDLKVAK 398
+ + I YQGV+I P+RR +M LV+EA G+DF L G + A
Sbjct: 314 HRCPSCPSNHPAKPISYQGVDIDFGAPFRRASMAQLVQEAAPGLDFEALMAAGREAAAAG 373
Query: 399 ETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKP 458
A +D + S+PS+G+LLNE+FE + E L+QPTFV ++P+EISPLAKP
Sbjct: 374 GPEAAAAVLAKAKQDAEAVRSAPSLGHLLNEMFEALAEAGLMQPTFVTEHPVEISPLAKP 433
Query: 459 HRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHN----EKRAAAVSEKS 514
HR G+TERFELFI GRE ANAFSELTD ++QR R EEQV +HN E++ E S
Sbjct: 434 HRSKPGVTERFELFIYGREHANAFSELTDAVEQRVRFEEQVARHNRAFEERKQVCAGEGS 493
Query: 515 SAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 574
A+E + YEV +D DF+ ALE+G+PP G+G+G+DRLVM+LT+S SIRDVIAFP
Sbjct: 494 DAEEAEE-----DYEVAVDYDFIAALEHGLPPTGGLGIGVDRLVMMLTDSPSIRDVIAFP 548
Query: 575 ILK 577
++K
Sbjct: 549 LMK 551
>gi|332982217|ref|YP_004463658.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699895|gb|AEE96836.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 497
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/517 (50%), Positives = 348/517 (67%), Gaps = 44/517 (8%)
Query: 64 ALRIKKVEELRSKGLEPYAYK-WDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
A+R K+E L +KGL P+++K + TH++ +++E + L E VS+AGR++A
Sbjct: 17 AIRRNKLEALTAKGLNPFSHKKYQITHNSKEVKEQFDSLDGCE--------VSIAGRIMA 68
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK +F + D+ G IQLY + + + S+ ++ + +DIGDILGV G + +T GE+
Sbjct: 69 KRGHGKASFCDIMDELGEIQLYVKMDEVGSEAYELFRD-LDIGDILGVIGIVFKTHSGEI 127
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV V +F +L KSL PLP+K+HGL D D RYR+RY+D+I +V + F R++I+ +R
Sbjct: 128 SVKVKTFELLAKSLRPLPEKWHGLQDPDLRYRRRYLDLIMNDKVKETFVTRSRIIKTMRN 187
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ G++EVETPVLQ AGGA ARPF+T+HN+L D+YLRIATELHLKR++IGGFE++Y
Sbjct: 188 FLDARGYLEVETPVLQTTAGGATARPFITHHNALDIDMYLRIATELHLKRLIIGGFERVY 247
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGRIFRNEG+ +HNPEFTTIE+YEAY DY MM++TE+++T+ A V G L I YQG
Sbjct: 248 EIGRIFRNEGMDIKHNPEFTTIELYEAYCDYHDMMDLTEQLITYIAQEVLGTLKITYQGQ 307
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESS 420
EI L PWRR M + +KE TG DF VA + RAL G+E KD S
Sbjct: 308 EIDLALPWRRMRMVDAIKEFTGEDFE------AVASDDQARALARRLGVEIKD------S 355
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+ GN++N VFE VE LVQPTF+LDYPIE+SPLAK + ERFELFI GRE+AN
Sbjct: 356 DTRGNVINAVFETFVEEHLVQPTFILDYPIEVSPLAKRTDYDPMMAERFELFITGREIAN 415
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DPLDQR R Q +Q RAA E +D+DFV A+
Sbjct: 416 AFSELNDPLDQRQRFIMQAKQ----RAAGDEEAH----------------MMDEDFVMAM 455
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+G+DRLVMLLT+S SIRDVI FP ++
Sbjct: 456 EYGMPPTGGLGIGVDRLVMLLTDSYSIRDVILFPTMR 492
>gi|433460571|ref|ZP_20418200.1| lysyl-tRNA ligase [Halobacillus sp. BAB-2008]
gi|432191413|gb|ELK48371.1| lysyl-tRNA ligase [Halobacillus sp. BAB-2008]
Length = 494
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/513 (49%), Positives = 347/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ R KG++P+ K++RT SA +L E Y +E + ++AGR++ +R
Sbjct: 11 VRRDKMDTHREKGMDPFGDKFERTDSAQELIEKYDQFTK-DELEEKQLPATIAGRIMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG IQLY K+ + + +D K D+GDI+GVSG M +T GELSV
Sbjct: 70 GKGKAGFTHIQDLSGQIQLYVRKDEIGDEAYDVFKA-ADLGDIVGVSGVMFKTNVGELSV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +LTKSL PLP+K+HGL DV++RYRQRY+D+I+ PE D F R+KI+ +R+ +
Sbjct: 129 KASEFQLLTKSLRPLPEKFHGLQDVEQRYRQRYLDLITNPESRDTFVLRSKIIQSMRRYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETP++ G AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 DGLGFLEVETPLMHGIAGGASARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DYQ +M +TE +V H A V G + Y EI
Sbjct: 249 GRVFRNEGVSTRHNPEFTMIELYEAYADYQDIMALTENMVAHIAKEVLGTTKVMYNDEEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE TG+DF E +D + AKE A G+E KD + + G
Sbjct: 309 DLEPEWARLHMVDAIKEYTGVDFWEQMSDER-AKEL---AEEHGIEIKD------TMTFG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +PIEISPLAK +R T+RFELFI GRE ANAFSE
Sbjct: 359 HIVNEFFEQRVEEKLIQPTFIYGHPIEISPLAKKNREDERFTDRFELFIVGREHANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DF+ ALEYGM
Sbjct: 419 LNDPIDQRQRFEAQLKER------------------EEGNDEAH--MMDEDFLEALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 459 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 491
>gi|304405774|ref|ZP_07387432.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
gi|304345017|gb|EFM10853.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
Length = 505
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/515 (47%), Positives = 344/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR+ G++P+ K++R+H A + + + EE S+ V++AGR++ +R
Sbjct: 20 IRRNKLDELRALGVDPFGSKFERSHVAKDILDAHEETTK-EELESQQIEVALAGRIMQKR 78
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D +G IQ+Y K+ L ++ + +DIGDI+GV G + +T GE SV
Sbjct: 79 GMGKASFAHIQDLTGKIQIYARKDTLSETEYAAFDL-LDIGDIVGVRGVVFKTNTGETSV 137
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+LTKSLLPLPDK+HGL DV+ RYRQRYVD+I+ P+V F R++I+ +R+ +
Sbjct: 138 KAKEIVVLTKSLLPLPDKHHGLKDVELRYRQRYVDLITNPDVQQTFIARSRIIQSMRRYL 197
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 198 DSLGYLEVETPTLHAIAGGASARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 257
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G IDYQG E+
Sbjct: 258 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLVKHIAQEVLGTTVIDYQGSEV 317
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PWRR +M +LVKEATG+DF +++ E A + K +E + G
Sbjct: 318 DLGTPWRRVSMVDLVKEATGVDFAA-----QISNEEAHEA-----ARQHKVPVEKHWAAG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE E L+QPTFV +P++ISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 368 HILNAFFEQFCEHTLIQPTFVTGHPVDISPLAKKNEQDPRFTDRFELFIVAREHANAFTE 427
Query: 485 LTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
L DP+DQR R E Q+ R+H +D ++E +DDDF+ ALEY
Sbjct: 428 LNDPIDQRERFEAQLLEREH--------------------GNDEAHE--MDDDFIRALEY 465
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLTN SIRDV+ FP ++
Sbjct: 466 GMPPTGGLGIGIDRLVMLLTNQPSIRDVLLFPHMR 500
>gi|146295866|ref|YP_001179637.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145409442|gb|ABP66446.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 495
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/516 (48%), Positives = 346/516 (67%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK+ EL+ PY K+D TH + +++E + E VSVAGR++++R
Sbjct: 18 RIKKLRELQQNKYNPYEKVKYDSTHYSTEIKENFEKF--------EGQFVSVAGRMLSKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++ + K + DIGDI+GV G + +T KGE+S+
Sbjct: 70 GHGKASFVDILDPKGKIQIYIKIDEVGEEKYQEFKEYYDIGDIIGVKGEVFKTHKGEISI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL DVD RYR+RY+D+I +V D F KR+ ++ IRK +
Sbjct: 130 KAKEIEMLTKCLRPLPEKWHGLRDVDTRYRKRYLDLIVNHQVRDTFIKRSLMIRSIRKYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 190 DDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MMN+TEE++T A V G L I YQG EI
Sbjct: 250 GRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM + +K+ G+DF++ L K+AK+ G+E +E +
Sbjct: 310 DLTPPWQRLTMIDAIKKYVGVDFSQVSSLDEARKIAKDL-------GIE------VEENW 356
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NEVFE VE LVQPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 357 QVGHIINEVFEQKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 416
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 417 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 456
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 492
>gi|374605050|ref|ZP_09677993.1| lysyl-tRNA synthetase [Paenibacillus dendritiformis C454]
gi|374389320|gb|EHQ60699.1| lysyl-tRNA synthetase [Paenibacillus dendritiformis C454]
Length = 502
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 348/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K+ RTH+A + + Y + EE +E VS+AGR++A+R
Sbjct: 17 IRRNKLDELRKLGIDPFGAKYSRTHTAQAVLDKYNGMTK-EELETEGAVVSLAGRIMAKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG +Q+Y ++ + +++++ + +D+GDI+GVSG + +T+ GELSV
Sbjct: 76 EMGKASFAHIQDLSGRLQIYVRQDTVPAEKYEAFTM-LDLGDIIGVSGKVFKTKTGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+KYHGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 135 KVTDLEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLIMNPDVQQTFIARSRIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSLGYLEVETPTLHAIAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G + I YQG +I
Sbjct: 255 GRVYRNEGISTRHNPEFTMIELYEAYADYEDIMRLTENMIAHIAQEVLGSMKIRYQGHDI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE TG+DF+ D + L + K +E+ + G
Sbjct: 315 DLTPQWRRLSMVDAVKEVTGVDFSVQMTDEE----------AHALAKEHKVPVENHFTFG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 365 HILNAFFEHFVEETLIQPTFITGHPVEISPLAKKNAQDPRFTDRFELFIVAREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ E+ + +D ++E +DDDF+ ALEYGM
Sbjct: 425 LNDPIDQRQRFEAQL------------------EEREHGNDEAHE--MDDDFIRALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT+S SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGVDRLVMLLTDSPSIRDVLLFPHMR 497
>gi|414161822|ref|ZP_11418073.1| lysyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410875183|gb|EKS23109.1| lysyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 495
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/514 (48%), Positives = 348/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ ++DRT SA +L E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGQRFDRTASAAELHEKWDAFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ +QFD K+ D+GDI+G+ G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQVGEEQFDIWKM-ADLGDIIGIEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF++LTKSL PLPDK+HGL D+++RYRQRY+D+I+ E + F R+KI+ E+R
Sbjct: 130 VKAKSFIMLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNQESTETFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ S GF+EVETP++ GGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNSKGFLEVETPMMHQIPGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+D+ +M+ITE + H + AV G I Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADFHDIMDITEGTIRHISNAVLGTAVIPYGDYE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R + + VKEATG++F ++ +D + RAL + I +
Sbjct: 310 IDLESDWKRVHIVDAVKEATGVNFYDVKSDDEA------RALA----KEHNIEITDHMTY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTFV +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFVYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+++ ++ +D ++E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQRERFEAQLKEK------------------EQGNDEAHE--MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMR 493
>gi|296131772|ref|YP_003639019.1| lysyl-tRNA synthetase [Thermincola potens JR]
gi|296030350|gb|ADG81118.1| lysyl-tRNA synthetase [Thermincola potens JR]
Length = 489
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/515 (49%), Positives = 347/515 (67%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K++ELR +G++P+ K+ RTH ++ E + L E V++AGR++A+R
Sbjct: 13 VRLNKLDELRKQGIDPFGEKFVRTHLTKEVIENFDRL--------EGQEVTLAGRLMAKR 64
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQLY + L ++F + +DIGDI+GV+G + +T+KGE+S+
Sbjct: 65 GQGKAGFSNIQDLTGRIQLYTRLDDLGEEEFKRFS-HLDIGDIIGVTGKVFKTQKGEISI 123
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V S+ +L KSL PLP+K+HGL DV+ RYRQRY+D+I PEV +VF R+KI+ IR +
Sbjct: 124 WVKSYKLLCKSLRPLPEKWHGLKDVELRYRQRYIDLIVNPEVKEVFVTRSKIIRAIRNYL 183
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETP++ AGGA ARPF+T+HN+L DLYLRIA EL+LKR+++GG EK+YEI
Sbjct: 184 DKLGFLEVETPMMHPIAGGATARPFITHHNALDMDLYLRIAPELYLKRLIVGGLEKVYEI 243
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ST+HNPEFT +E+YEAY+DY+ MM +TE +V+ A V G I YQG EI
Sbjct: 244 NRNFRNEGISTKHNPEFTMLELYEAYADYEDMMVLTENLVSTVAKEVLGTDKIVYQGTEI 303
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI--ESSPS 422
L PWRR M +KE TG+DF+ + D + +E K I E S
Sbjct: 304 DLAAPWRRVPMLEAIKEETGVDFSVINTD------------AEAIEAAQKLGIKLEEGVS 351
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G ++NEVFE VEPKLVQPTFV+DYPIEISPLAK + + T RFE FI RE ANAF
Sbjct: 352 KGTVINEVFETFVEPKLVQPTFVIDYPIEISPLAKRKKDNPAYTYRFEAFIYSRETANAF 411
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ EE+ R+ EKRA + DD ++ +D+D++ AL+
Sbjct: 412 SELNDPIDQ----EERFRKQVEKRA--------------KGDDEAH--MMDEDYINALQI 451
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+GIDRLVMLLT+SASIRDV+ FP+++
Sbjct: 452 GLPPTGGLGIGIDRLVMLLTDSASIRDVLLFPLMR 486
>gi|430751768|ref|YP_007214676.1| lysyl-tRNA synthetase [Thermobacillus composti KWC4]
gi|430735733|gb|AGA59678.1| lysyl-tRNA synthetase (class II) [Thermobacillus composti KWC4]
Length = 510
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/534 (46%), Positives = 353/534 (66%), Gaps = 34/534 (6%)
Query: 46 NRRASSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN 103
++ S T+ ++E LRI+ K++ELR GL+P+ K++RTH A ++ + Y L
Sbjct: 4 QQQGGSVETAGQEQELSELLRIRRSKLDELRKLGLDPFGRKYERTHQAQEILDAYDALET 63
Query: 104 GEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVD 163
EE ++ VS+AGR++ +R+ GK +F ++D SG IQ+Y ++ + + + +D
Sbjct: 64 -EELEAKQVSVSIAGRIMQKRSMGKASFAHIQDLSGRIQIYVRQDAVGETAYKAFSM-LD 121
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
IGDI+GV G++ +T+ GE SV V +LTKSLLPLPDKYHGL DV+ RYRQRYVD+I
Sbjct: 122 IGDIIGVKGTVFKTKTGETSVKVQELEVLTKSLLPLPDKYHGLKDVELRYRQRYVDLIVN 181
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
P+V F R++I+ +R+ ++S G++EVETP L AGGA ARPF+T+HN+L LY+R
Sbjct: 182 PDVKQTFITRSRIIQSMRRYLDSHGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYMR 241
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IA ELHLKR+++GG EK+YEIGR++RNEG+STRHNPEFT +E+YEAY+DY+ +M +TE +
Sbjct: 242 IAIELHLKRLIVGGLEKVYEIGRVYRNEGVSTRHNPEFTMLELYEAYADYRDIMTLTENL 301
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR 403
+ H A V G I YQG+EI L PWRR +M LVKEATGIDF + +D +E
Sbjct: 302 IAHIAQDVLGTTKITYQGMEIDLAPPWRRVSMVELVKEATGIDFTKQMSD----EEAHEL 357
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
A G+ +E G+++N FE E L+QPTFV +P+ ISPLAK +
Sbjct: 358 AKAHGVP------VEPHMQFGHIVNAFFEKFCEHTLIQPTFVTGHPVAISPLAKKNDEDP 411
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T+RFELFI RE ANAF+EL DP+DQR R E Q+ + ++
Sbjct: 412 RFTDRFELFIVAREHANAFTELNDPIDQRERFEAQLAER------------------EQG 453
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D ++E +D+DF+ ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 454 NDEAHE--MDEDFLRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 505
>gi|418614877|ref|ZP_13177837.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU118]
gi|418631650|ref|ZP_13194105.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU128]
gi|374818965|gb|EHR83100.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU118]
gi|374834520|gb|EHR98160.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU128]
Length = 495
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 350/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKEATG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEATGVDFYNINSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|421859862|ref|ZP_16292052.1| lysyl-tRNA synthetase [Paenibacillus popilliae ATCC 14706]
gi|410830623|dbj|GAC42489.1| lysyl-tRNA synthetase [Paenibacillus popilliae ATCC 14706]
Length = 502
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 347/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K+ RTH+A + + Y + EE +E VS+AGR++A+R
Sbjct: 17 IRRNKLDELRKLGIDPFGAKYSRTHTAKVVLDKYNGMTK-EELETEGAIVSLAGRMMAKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D S +Q+Y ++ + + +++ + +D+GDI+GVSG + +T+ GELSV
Sbjct: 76 EMGKASFAHIQDLSSRLQIYVRQDTVPAAKYEAFTM-LDLGDIIGVSGKVFKTKTGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+KYHGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 135 KVTDLEVLSKSLYPLPEKYHGLKDVEMRYRQRYVDLIMNPDVQQTFIARSRIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSLGYLEVETPTLHAIAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G + I YQG++I
Sbjct: 255 GRVYRNEGISTRHNPEFTMIELYEAYADYEDIMRLTENMIAHIAQEVFGTMQIRYQGIDI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE TG+DF+ D + L + K +E+ + G
Sbjct: 315 DLTPQWRRLSMVDAVKEVTGVDFSAQMTDEE----------AHALAKEHKVPVENHFTFG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 365 HILNAFFEHFVEETLIQPTFITGHPVEISPLAKKNMQDPRFTDRFELFIVAREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ E+ + +D ++E +DDDF+ ALEYGM
Sbjct: 425 LNDPIDQRQRFEAQL------------------EEREHGNDEAHE--MDDDFIRALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT+S SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGVDRLVMLLTDSPSIRDVLLFPHMR 497
>gi|260893493|ref|YP_003239590.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260865634|gb|ACX52740.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 489
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/511 (50%), Positives = 348/511 (68%), Gaps = 40/511 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+++G+EPY +++RTH A +++E + L E VS+AGR++ARR
Sbjct: 14 VRYEKLEELKAQGIEPYGGRYERTHLAEEVRERFSEL--------EGQEVSLAGRIMARR 65
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK+ F L+D SG IQ+ ++ + + ++ K +D+GDI+GV GS+ +T GE+++
Sbjct: 66 SHGKVTFADLQDFSGRIQIMVRQDAVGPEAYEIFKK-LDLGDIIGVKGSVFKTRTGEITI 124
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +L KSL PLP+K+HGL DVD RYRQRY+D+I PEV +F R++I+ IR+ +
Sbjct: 125 AVARFELLAKSLRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKRIFILRSQIIRAIRRFL 184
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP++Q GGA ARPF+TYHN+L LYLRIA EL+LKR+L+GGFEK+YEI
Sbjct: 185 DERGFLEVETPMMQPVPGGAAARPFITYHNALEMQLYLRIAPELYLKRLLVGGFEKVYEI 244
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+STRHNPEFT +E+Y+AY+DYQ M+ +TEE++T A V G I Y EI
Sbjct: 245 NRNFRNEGISTRHNPEFTMLELYQAYADYQDMLKLTEELITWVAKEVLGTWQIKYGEAEI 304
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PWRR ++ V++ TGIDF L D L G+E K K + G
Sbjct: 305 DLSPPWRRISLLEAVRQKTGIDFASLEADEAREAAERL-----GVELKGKTLW------G 353
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++NEVFE +VEP+L+ PTFVLDYP++ISPLAK + LT RFELFI GRE+ANAFSE
Sbjct: 354 EIVNEVFEELVEPELINPTFVLDYPVDISPLAKRKKEDPRLTYRFELFIGGREIANAFSE 413
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQR R +Q+ E+R A + + H + D+DF+ ALEYGM
Sbjct: 414 LNDPLDQRERFLQQL----ERRRAG------------DEEAHMF----DEDFLVALEYGM 453
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPI 575
PPA G+G+GIDRLVMLLTNS SIR+VI FP+
Sbjct: 454 PPAGGLGIGIDRLVMLLTNSPSIREVILFPL 484
>gi|416128144|ref|ZP_11597209.1| lysyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
gi|418633004|ref|ZP_13195422.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU129]
gi|420191265|ref|ZP_14697197.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM037]
gi|420200983|ref|ZP_14706620.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
gi|420204982|ref|ZP_14710519.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM015]
gi|319399674|gb|EFV87928.1| lysyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
gi|374840067|gb|EHS03571.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU129]
gi|394257789|gb|EJE02697.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM037]
gi|394267365|gb|EJE11961.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
gi|394271561|gb|EJE16053.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM015]
Length = 495
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 350/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKEATG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEATGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|253576832|ref|ZP_04854157.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843699|gb|EES71722.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 502
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 349/513 (68%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++RTH A + Y L+ EE ++ V++AGR++A+R
Sbjct: 19 IRRDKLDELRGLGIDPFGKKYERTHMAGDILRQYDGLSK-EELEEKHVEVTIAGRIMAKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F L+D SG IQ+Y ++ + ++ + +D+GDI+GV+G + +T+ GE ++
Sbjct: 78 VMGKASFAHLQDLSGKIQIYVRQDSVPEVKYQAFSI-LDLGDIVGVTGEVFKTKTGETTI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLPDKYHGL DV+ RYRQRYVD+I PEV F KR++I+ +R+ +
Sbjct: 137 KVKDLEVLSKSLYPLPDKYHGLKDVELRYRQRYVDLIVNPEVQQTFIKRSQIIRSMRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 197 DSLGYLEVETPTLHNIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +++H A V G + YQG E+
Sbjct: 257 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLISHIAQEVLGTQVVHYQGHEV 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ WRR +M + VKE TG+DF+ ++++ E R L + +E + G
Sbjct: 317 NLKPQWRRVSMVDAVKEVTGVDFS-----VQMSNEEAHR-----LAKEHNVPVEPHMTYG 366
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 367 HILNAFFEQFVEETLIQPTFVYGHPVEISPLAKKNEQDPRFTDRFELFIVAREHANAFTE 426
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ + ++ +D ++E +D+DF+ ALEYGM
Sbjct: 427 LNDPIDQRQRFEAQLLER------------------EQGNDEAHE--MDEDFIRALEYGM 466
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT+SASIRDV+ FP ++
Sbjct: 467 PPTGGLGIGVDRLVMLLTDSASIRDVLLFPHMR 499
>gi|114565688|ref|YP_752842.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122319141|sp|Q0B0N3.1|SYK_SYNWW RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|114336623|gb|ABI67471.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 493
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/516 (47%), Positives = 350/516 (67%), Gaps = 39/516 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ +R++K+ EL+ G+EP+ +++R A ++E + L E +++AGR++
Sbjct: 11 LKKVRLEKLAELKEMGIEPFGRRFERDSMAQNIKEAFSEL--------EGKTIAIAGRIM 62
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK F L D SG+IQLY ++ L ++++ K +DIGDILG+ G + RT+KGE
Sbjct: 63 SKRRHGKAGFANLADLSGSIQLYFRQDDLGPEKYELYKK-LDIGDILGIQGEVFRTQKGE 121
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+S+ V L+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV +VF KR++I+ E+R
Sbjct: 122 ISIHVRDLYYLSKSLTPLPEKWHGLKDVELRYRQRYVDLIVNPEVKEVFVKRSRIIKEMR 181
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
++ GF+EVETP++Q GGA ARPF+T+HN+L +LYLRIA EL+LKR+++GG EK+
Sbjct: 182 NYLDDRGFLEVETPMMQPIPGGATARPFITHHNALDMELYLRIAPELYLKRLIVGGLEKV 241
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEI R FRNEG+STRHNPEFT +E+Y+AY DY+ MM + E++++ L VNG + ID++G
Sbjct: 242 YEINRNFRNEGISTRHNPEFTMLEIYQAYGDYEVMMQLCEDLISAVMLKVNGSMQIDFEG 301
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
++ PWRR TM + +KEA G+DF+ + +D ++ A GLE +++
Sbjct: 302 EQLDFTPPWRRVTMLDAIKEAAGLDFSLIKSD----EDACQAAWQLGLE------VKAGA 351
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G L+NE+FE VE KL+QPTFV +P+E+SPLAK + T+RFELFI RE+ANA
Sbjct: 352 SRGELINEIFEQFVEDKLIQPTFVYGHPVEVSPLAKRNLETPEFTDRFELFIMQREIANA 411
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQ+ R +QV EKRA +E +D+D++ ALE
Sbjct: 412 FSELNDPIDQKERFIKQV----EKRAGGDAEAH----------------MMDEDYINALE 451
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPPA GMG+GIDRLVML+T S SIRDVI FP L+
Sbjct: 452 YGMPPAGGMGIGIDRLVMLMTGSPSIRDVILFPTLR 487
>gi|358052322|ref|ZP_09146228.1| lysyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
gi|357258205|gb|EHJ08356.1| lysyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
Length = 495
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/514 (48%), Positives = 345/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN-DHVSVAGRVVAR 123
+R +K++EL G++P+ K+DRT +++L+E + + E + E HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRTGLSSELKENWDQFSKEELAEKEEESHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ DQF+ K D+GDI+ V G M +T GELS
Sbjct: 71 RGKGKAGFAHIQDLAGQIQIYVRKDQVGDDQFELWKN-ADLGDIVAVKGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F++LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKEFILLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ GGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIPGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQNVFGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE WRR M + VKEATG+DF E+ +D +E A G+E KD
Sbjct: 310 IDLESSWRRLHMVDAVKEATGVDFYEVNSD----EEAKALAKEHGIEIKDNM------KY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + A T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPADARFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E Q+ + ++ +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRARFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|384134053|ref|YP_005516767.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339288137|gb|AEJ42247.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 495
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/515 (48%), Positives = 346/515 (67%), Gaps = 31/515 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R++K++ LR +G++P+ ++D TH A + + + EE EN V +AGR+VARR
Sbjct: 10 RLEKMKALRQRGIDPFGGRYDVTHHAADIHR-FGEGKSQEELERENLRVRIAGRMVARRG 68
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F L D +G IQ+Y + + L + +D + VD+GDILGV G++ RT +GE++VL
Sbjct: 69 HGKATFAVLNDVTGNIQIYAKYDVLGPEAYDVFQHLVDLGDILGVEGTVFRTNRGEITVL 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
LTKSL PLP+K+HGL DV+ RYRQRY+D+I P+V +F R++I+ EIR+ ++
Sbjct: 129 AEQVTFLTKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPDVRQIFIARSRIIQEIRRFLD 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP L A GA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEIG
Sbjct: 189 GQGFLEVETPTLHTVASGAHARPFITHHNALDMDLYLRIAIELHLKRLIVGGLERVYEIG 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R++RNEG+STRHNPEFT +E+Y+AY+D+ +M++TE +V H A AV GKL + Y +
Sbjct: 249 RVYRNEGVSTRHNPEFTMLELYQAYADFHDIMDLTENMVRHAAKAVIGKLHVPYGDHVVD 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
LE P++R + +LV E TG+DF + +D +E A G++ IE + G+
Sbjct: 309 LESPFKRAHIADLVLEHTGVDFRRVTSD----EEARRLAAEHGVK------IEPHMTYGH 358
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
+LNE FE VE KL+QPTFV +P+EISPLAK + T+RFELFI GRE ANAFSEL
Sbjct: 359 ILNEFFEQRVEDKLIQPTFVYGHPVEISPLAKKNADDPRFTDRFELFIVGREHANAFSEL 418
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQR R Q+R EK + E+ +E LD+DF+TALE+GMP
Sbjct: 419 NDPIDQRERFLAQLR-----------EKEAGNEEAQE---------LDEDFLTALEHGMP 458
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
P G+G+GIDRLVMLLT SIRDV+ FP+++ +Q
Sbjct: 459 PTGGLGVGIDRLVMLLTGQPSIRDVLLFPLMRDRQ 493
>gi|297616356|ref|YP_003701515.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144193|gb|ADI00950.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 487
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/525 (47%), Positives = 350/525 (66%), Gaps = 39/525 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
+ D ++ +R+ K++ELR KG+EPY +++R +A ++ Y +E V
Sbjct: 2 SEDTHQLKQVRLDKLQELRDKGIEPYGGRFERNATAADIKNNY--------PGNEGQAVR 53
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGR++ARR GK F L+D SG IQLY L +++++ K +DIGDI+GV G++
Sbjct: 54 IAGRIMARRTHGKAGFANLQDQSGQIQLYFRLNDLGAEKYELFKS-MDIGDIIGVEGTVF 112
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
T+ E++V V V L K+L PLP+K+HGL DV+ RYRQRYVD+I P V +VF KR++
Sbjct: 113 LTKTQEITVHVQDLVYLAKALNPLPEKWHGLKDVELRYRQRYVDLIVNPPVREVFVKRSQ 172
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I+ E+R+ ++ GF+EVETP++Q GGA ARPF+T+HN+LG DLYLRIA EL+LKR+L+
Sbjct: 173 IIREMRRYLDERGFLEVETPMMQPIPGGAAARPFITHHNALGIDLYLRIAPELYLKRLLV 232
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFEK+YEI R FRNEG+ST+HNPEFT +E+Y+AY+D+Q MM +TE++++ +V G +
Sbjct: 233 GGFEKVYEINRNFRNEGISTKHNPEFTMLELYQAYADFQDMMRLTEDLISSVVKSVFGTM 292
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
++YQG + PW+R M VK+ G+DF DLK +E A GLE
Sbjct: 293 VVEYQGSRLDFTPPWQRLPMLEAVKKYAGVDF----TDLKSDEEAQEAARSLGLE----- 343
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+E+ + G ++N VFE VEP LVQP FV +P+++SPLAK +R + T+RFE+FI
Sbjct: 344 -VEAEATRGEVINLVFEEFVEPHLVQPVFVYGHPVDVSPLAKRNRENPEFTDRFEVFIMN 402
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE+ANAFSEL DP+DQR+R E+QV A EK + + +D+D
Sbjct: 403 REIANAFSELNDPIDQRSRFEKQV---------AKREKGDTEAHM-----------MDED 442
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
++ ALEYGMPPA G+G+GIDRLVMLLT+S SIRDVI FP L+ Q
Sbjct: 443 YINALEYGMPPAGGLGIGIDRLVMLLTDSPSIRDVILFPTLRPTQ 487
>gi|418324979|ref|ZP_12936190.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|365229041|gb|EHM70209.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU071]
Length = 495
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 349/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKE TGIDF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEVTGIDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|418328279|ref|ZP_12939396.1| lysine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
gi|420178965|ref|ZP_14685289.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
gi|420180130|ref|ZP_14686386.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
gi|365232175|gb|EHM73186.1| lysine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
gi|394245653|gb|EJD90933.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
gi|394251339|gb|EJD96435.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
Length = 495
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/517 (47%), Positives = 350/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ +QF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDNQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKEATG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEATGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|228476210|ref|ZP_04060913.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
gi|228269695|gb|EEK11194.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
Length = 496
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 347/514 (67%), Gaps = 31/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++RT +A++L+E + H + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERTATASELKEKWDHFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ + FD L D+GDI+G+ G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLTGQIQIYVRKDQIDEEPFDNLWKTTDLGDIVGIEGVMFKTNTGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 131 VKAKSFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ G++EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 191 LNQRGYLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 251 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQTVLGSAKVQYNGEE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R + + VKEATG++F ++K +E A G+E I +
Sbjct: 311 IDLESDWKRLHIVDAVKEATGVNF----YNVKTDEEAKALAKAHGIE------ITENMKY 360
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 361 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 420
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D+D++ ALEYG
Sbjct: 421 ELNDPIDQRERFEAQLVEK------------------EQGNDEAHE--MDEDYIEALEYG 460
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 461 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 494
>gi|418413355|ref|ZP_12986596.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
gi|420164610|ref|ZP_14671337.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
gi|420169423|ref|ZP_14676023.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|420186388|ref|ZP_14692457.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM040]
gi|394231313|gb|EJD76946.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|394231351|gb|EJD76983.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
gi|394252179|gb|EJD97218.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM040]
gi|410879117|gb|EKS26969.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
Length = 495
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/517 (47%), Positives = 349/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKE TG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEVTGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|223044407|ref|ZP_03614440.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|314932739|ref|ZP_07840109.1| lysine--tRNA ligase [Staphylococcus caprae C87]
gi|417906948|ref|ZP_12550726.1| lysine--tRNA ligase [Staphylococcus capitis VCU116]
gi|222442196|gb|EEE48308.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|313654569|gb|EFS18321.1| lysine--tRNA ligase [Staphylococcus caprae C87]
gi|341597149|gb|EGS39717.1| lysine--tRNA ligase [Staphylococcus capitis VCU116]
Length = 495
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 347/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++N+L+E + + E E++ HV++AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSATSNELKEQWDQFSKEELHEKEDESHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ +QFD K+ D+GDI+G+ G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLEGQIQIYVRKDQVGEEQFDIWKI-ADLGDIVGIEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVSYNDEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE WRR + + VKEATG++F D+K +E A G+E I +
Sbjct: 310 IDLESSWRRLHIVDAVKEATGVNF----YDVKTDEEAVSLAKEHGIE------ITENMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQRERFEAQLVEK------------------EQGNDEAHE--MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|334134044|ref|ZP_08507573.1| lysine--tRNA ligase [Paenibacillus sp. HGF7]
gi|333608391|gb|EGL19689.1| lysine--tRNA ligase [Paenibacillus sp. HGF7]
Length = 499
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/518 (46%), Positives = 347/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K+ RTH+A Q+ + Y EE + VS+AGR++ +R
Sbjct: 13 IRRDKLDELRGLGVDPFGDKYVRTHTAKQILDAYEETPK-EELEQQTVEVSIAGRIMQKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
A GK +F L+D +G IQ+Y ++ L +++ + +DIGD++GV G++ +T+ GE S+
Sbjct: 72 AMGKASFAHLQDITGKIQIYVRQDALGDTKYNAFDL-LDIGDMVGVKGTVFKTKTGETSI 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +LTKSLLPLP+KYHGL DV+ RYRQRYVD+I EV + F R++I+ +R+ +
Sbjct: 131 KVKELEVLTKSLLPLPEKYHGLKDVETRYRQRYVDLIMNQEVKETFILRSRIIQSMRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DGLGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G T+ YQG E+
Sbjct: 251 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENMVAHIAQEVLGTTTVQYQGHEV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R +M + +KE G+DF+ + ++ E R L + K +E + G
Sbjct: 311 NLAPSWKRISMVDAIKEVVGVDFS-----VHMSNEEAQR-----LAKEHKVPVEPHMTFG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N+ FE VE L+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 361 HIVNQFFETFVEETLIQPTFIYGHPLEISPLAKKNPEDPRFTDRFELFIVAREHANAFTE 420
Query: 485 LTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
L DP+DQR R E Q+ R+H +D ++E +DDDF+ ALEY
Sbjct: 421 LNDPIDQRQRFEAQLLEREH--------------------GNDEAHE--MDDDFIRALEY 458
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ Q+
Sbjct: 459 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPHMREQR 496
>gi|374298084|ref|YP_005048275.1| lysyl-tRNA synthetase (class II) [Clostridium clariflavum DSM
19732]
gi|359827578|gb|AEV70351.1| lysyl-tRNA synthetase (class II) [Clostridium clariflavum DSM
19732]
Length = 506
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/536 (47%), Positives = 352/536 (65%), Gaps = 46/536 (8%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEES 107
+ +++ D + +R K+ EL+ G +P+ K+D THS +++ + ES
Sbjct: 13 SQNANVEYEDLNEILKVRRVKLAELQKNGKDPFKIVKYDVTHST-------KYIVDNFES 65
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
E VSVAGR++++R GK +F +RD G IQ+Y + + + ++ +++ K F DIGDI
Sbjct: 66 -MEGAFVSVAGRLMSKRGMGKASFCDVRDRDGKIQIYVKMDEVGAEVYEEFKKF-DIGDI 123
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+GV G + +T KGE+SV V V+L+KSL PLP+K+HGL DVD RYRQRYVD+I P+V
Sbjct: 124 VGVKGEVFKTHKGEISVKVQEIVLLSKSLQPLPEKWHGLKDVDLRYRQRYVDLIVNPDVR 183
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
+ F R+KI+ IRK ++ GF+EVETP+L GGA ARPFVT+HN+L D+YLRIA E
Sbjct: 184 NTFIVRSKIIKAIRKFLDDRGFLEVETPILNTIPGGAAARPFVTHHNTLDIDMYLRIAPE 243
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L+LKR+++GG EK+YEIGR+FRNEG+S +HNPEFT +E+YEAY+DY+ MM +TE++++
Sbjct: 244 LYLKRLIVGGLEKVYEIGRMFRNEGMSVKHNPEFTLMEVYEAYTDYKGMMELTEQLISTV 303
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRA 404
A V G I YQG EI L PW R TM V++ G++FN + +D + +AKE
Sbjct: 304 AQEVLGTTKITYQGQEIDLTPPWNRMTMIEAVEKYAGVNFNNITSDEEARNIAKEK---- 359
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
K IE +P+ G +LN +FE VE LVQPTF+LDYP+E+SPL K
Sbjct: 360 ---------KVHIEGNPTKGEVLNLMFEEFVEEHLVQPTFILDYPVEVSPLTKRKPDMPS 410
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
LTERFELFI REMANA+SEL DP+DQ+ R +QV KR A E +
Sbjct: 411 LTERFELFITCREMANAYSELNDPIDQKERFLDQV----AKREAGDEEAN---------- 456
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+DDDF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP +K ++
Sbjct: 457 ------MMDDDFITALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMKPKE 506
>gi|242371652|ref|ZP_04817226.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
gi|242350601|gb|EES42202.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
Length = 495
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 349/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++DR+ ++++L+ + + E E++ HV++AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFDRSATSSELKAQWDQYSKEELHEKEDESHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ +QFD K+ D+GDI+G+ G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWKI-ADLGDIVGIEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE WRR + + VKEATG++F ++ +D +E A G+E I +
Sbjct: 310 IDLESSWRRLHIVDAVKEATGVNFYDVQSD----EEAVALAKEHGIE------ITENMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQRERFEAQLVEK------------------EQGNDEAHE--MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|302871283|ref|YP_003839919.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302574142|gb|ADL41933.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 495
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/516 (48%), Positives = 342/516 (66%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK+ EL+ PY K+D TH + ++E + E V VAGR++++R
Sbjct: 18 RIKKLRELQQNKYNPYEKVKYDPTHYSTDIKENFDQF--------EGKFVCVAGRMLSKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++ + K + DIGDI+GV G + +T KGE+S+
Sbjct: 70 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYQEFKEYYDIGDIIGVKGEVFKTHKGEVSI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL DVD RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 130 KAKEIEMLTKCLRPLPEKWHGLRDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 190 DDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MM++TEE++T A V L I YQG EI
Sbjct: 250 GRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMDLTEELITTVAQEVLSTLKITYQGQEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM +K+ G+DF + L K+AK+ G+E +E +
Sbjct: 310 DLTPPWQRLTMVEAIKKYVGVDFENVSSLDEARKIAKDL-------GIE------VEENW 356
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NEVFE VE L+QPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 357 QVGHIINEVFEKKVEDFLIQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 416
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 417 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 456
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 492
>gi|379724701|ref|YP_005316832.1| LysS protein [Paenibacillus mucilaginosus 3016]
gi|386727455|ref|YP_006193781.1| lysyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
gi|378573373|gb|AFC33683.1| LysS [Paenibacillus mucilaginosus 3016]
gi|384094580|gb|AFH66016.1| lysyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
Length = 498
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/516 (47%), Positives = 350/516 (67%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELRS G++P+ K++RTH A ++ + Y + EE + VS+AGR++ +R
Sbjct: 13 IRRGKLDELRSMGIDPFGQKYERTHHAAEITKAYEEKSK-EELDELKAEVSIAGRIMQKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D +G IQ+Y + + + + +DIGDI+G+ G++ +T+ GELSV
Sbjct: 72 EMGKAGFAHLQDITGKIQIYVRADAVGETPYKAYDL-LDIGDIIGIRGTVFKTKTGELSV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+S V+L+KSLLPLP+KYHGL DV+ RYRQRYVD+I +V F R+KI+ +R+ +
Sbjct: 131 KASSVVVLSKSLLPLPEKYHGLKDVELRYRQRYVDLIMNQDVQQTFIARSKIIQSMRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++LG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DALGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLIVGGMEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TEE++ H A V G TI YQG E+
Sbjct: 251 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMKLTEEMIAHIAQEVLGTTTIMYQGHEV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR TM + +KE G+DF+ ++++ E R L + K +E + + G
Sbjct: 311 NLAPQWRRVTMVDAIKEVVGVDFS-----VQMSDEEAHR-----LAKEHKVPVEPTMTFG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N+ FE VE L+QPTF+ +P+ ISPLAK T+RFELFI RE ANAF+E
Sbjct: 361 HIVNQFFETFVEETLIQPTFITGHPVAISPLAKKSDADPRFTDRFELFIVAREHANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R AA + E+ ++ +D ++E +D+DFV ALEYGM
Sbjct: 421 LNDPIDQRERF-----------AAQLVER-------EQGNDEAHE--MDEDFVRALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLT++ SIRDV+ FP+++ +Q
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPLMRERQ 496
>gi|168830126|gb|ACA34354.1| lysyl-tRNA synthetase [Paenibacillus polymyxa]
Length = 506
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/536 (46%), Positives = 353/536 (65%), Gaps = 39/536 (7%)
Query: 50 SSSSTSTSDREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEE 106
+++ S +RE + L R K++ELRS G++P+ K+ RT A L Y L EE
Sbjct: 5 TTNQESQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTK-EE 63
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
+N VS+AGR++A+R GK +F ++D SG IQ+Y ++ + ++ + +D+GD
Sbjct: 64 LEEKNIEVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPESKYKAFGI-LDLGD 122
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV G + +T+ GE ++ V +L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV
Sbjct: 123 IVGVKGVLFKTKTGETTIKVLDIEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEV 182
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
F R++I+ +R+ ++SLG++EVETP L AGGA A+PFVT+HN+L LY+RIA
Sbjct: 183 QKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFVTHHNALDMQLYMRIAI 242
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YEIGR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMQLTENMVAH 302
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A V G I YQG E+ L WRR +M + VKE TG+DF+ ++++ E R
Sbjct: 303 IAQEVLGTQHIQYQGQEVDLTPQWRRVSMVDAVKEVTGVDFS-----VQMSNEEAHR--- 354
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
L + K +E + G++LN FE VE L+QPTF+ +P+EISPLAK + + T
Sbjct: 355 --LAKEHKVSVEPHMTFGHILNAFFEQFVEETLIQPTFITGHPVEISPLAKKNEQDPRFT 412
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESD 524
+RFELF+ RE ANAF+EL DP+DQR R E Q+ R+H +
Sbjct: 413 DRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREH--------------------GN 452
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
D ++E +DDDF+ ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++ QQ
Sbjct: 453 DEAHE--MDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMRNQQ 506
>gi|288554692|ref|YP_003426627.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288545852|gb|ADC49735.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 499
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 344/514 (66%), Gaps = 32/514 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R K+ +L ++G P+ +++RTH+A ++ + L+ EE + V++AGR++ +
Sbjct: 12 AVRRDKLSQLEAQGANPFGGRFERTHTAKTMESTFTELSK-EELEEQGHEVTLAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG +Q+Y K+ + +Q+D L +DIGDI+GV+G+ +T+ GELS
Sbjct: 71 RGKGKAGFAHIQDLSGQVQIYVRKDAVGEEQYD-LFTSIDIGDIVGVTGTAFKTKVGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V F IL+KSL PLPDK+HGL D+++RYRQRYVD+I PEV D F R+KI+ +R+
Sbjct: 130 VKVTDFQILSKSLRPLPDKFHGLKDIEQRYRQRYVDLIMNPEVRDTFVLRSKILQSMRRY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EVETP + AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LDNRGFLEVETPTMHSIAGGASARPFVTHHNALDMTLYMRIAIELHLKRLIVGGMEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DYQ +M +TEE+V H A V G + Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYQDIMELTEELVAHIAREVLGTTKVTYGEYE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ LE W R M + +KE +G+DF D + RAL + K ++ + +
Sbjct: 310 VDLEPKWTRVHMVDAIKEKSGVDFWPEMTDEEA------RALA----KEHKVPVKETMTY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L+QPTF+ +P ISPLAK + T+RFELFI GRE ANAFS
Sbjct: 360 GHVVNEFFEHFVEESLIQPTFIYGHPTAISPLAKKNPEDERFTDRFELFIVGREHANAFS 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E+Q+ + ++ DD ++ +D+DFV +LEYG
Sbjct: 420 ELNDPIDQRQRFEQQLVER------------------EQGDDEAH--MMDEDFVESLEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 493
>gi|314937276|ref|ZP_07844618.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
gi|418619040|ref|ZP_13181882.1| lysine--tRNA ligase [Staphylococcus hominis VCU122]
gi|313654572|gb|EFS18322.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
gi|374825746|gb|EHR89669.1| lysine--tRNA ligase [Staphylococcus hominis VCU122]
Length = 496
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/514 (46%), Positives = 347/514 (67%), Gaps = 31/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++RT +A++L+E + H + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERTATASELKEKWDHFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ + FD L D+GDI+G+ G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLTGQIQIYVRKDQIGEEPFDNLWKTTDLGDIVGIEGVMFKTNTGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 131 VKAKSFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ G++EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 191 LNQRGYLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V + A V G + Y G E
Sbjct: 251 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRYIAQTVLGSAKVQYNGEE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R + + VKEATG++F ++K +E A G+E I +
Sbjct: 311 IDLESDWKRLHIVDAVKEATGVNF----YNVKTDEEAKALAKAHGIE------ITENMRY 360
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 361 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 420
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D+D++ ALEYG
Sbjct: 421 ELNDPIDQRERFEAQLVEK------------------EQGNDEAHE--MDEDYIEALEYG 460
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 461 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 494
>gi|308066909|ref|YP_003868514.1| lysyl-tRNA synthetase [Paenibacillus polymyxa E681]
gi|305856188|gb|ADM67976.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Paenibacillus polymyxa
E681]
Length = 506
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/536 (46%), Positives = 353/536 (65%), Gaps = 39/536 (7%)
Query: 50 SSSSTSTSDREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEE 106
+++ S +RE + L R K++ELRS G++P+ K+ RT A L Y L EE
Sbjct: 5 TTNQESQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTK-EE 63
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
+N VS+AGR++A+R GK +F ++D SG IQ+Y ++ + ++ + +D+GD
Sbjct: 64 LEEKNIEVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPESKYKAFGI-LDLGD 122
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV G + +T+ GE ++ V +L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV
Sbjct: 123 IVGVKGVLFKTKTGETTIKVLDIEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEV 182
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
F R++I+ +R+ ++SLG++EVETP L AGGA A+PF+T+HN+L LY+RIA
Sbjct: 183 QKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLYMRIAI 242
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YEIGR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMQLTENMVAH 302
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A V G I YQG E+ L WRR +M + VKE TG+DF+ ++++ E R
Sbjct: 303 IAQEVLGTQHIQYQGQEVDLTPQWRRVSMVDAVKEVTGVDFS-----VQMSNEEAHR--- 354
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
L + K +E + G++LN FE VE L+QPTF+ +P+EISPLAK + + T
Sbjct: 355 --LAKEHKVPVEPHMTFGHILNAFFEQFVEETLIQPTFITGHPVEISPLAKKNEQDPRFT 412
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESD 524
+RFELF+ RE ANAF+EL DP+DQR R E Q+ R+H +
Sbjct: 413 DRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREH--------------------GN 452
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
D ++E +DDDF+ ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++ QQ
Sbjct: 453 DEAHE--MDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMRNQQ 506
>gi|23097543|ref|NP_691009.1| lysyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
gi|39932206|sp|Q8EU10.1|SYK_OCEIH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|22775766|dbj|BAC12044.1| lysine-tRNA ligase [Oceanobacillus iheyensis HTE831]
Length = 493
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/515 (48%), Positives = 339/515 (65%), Gaps = 32/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E KGL+P+ K++R+H A L E Y + EE D V++AGR++ +R
Sbjct: 11 VRRDKLAEHMEKGLDPFGGKFERSHQATDLIEKYDSYSK-EELEETTDEVTIAGRLMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG IQLY K+ + D ++ K D+GDI+GV+G M +T GE+SV
Sbjct: 70 GKGKAGFAHIQDLSGQIQLYVRKDMIGDDAYEVFKS-ADLGDIVGVTGVMFKTNVGEISV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLP+KYHGL D+++RYRQRY+D+I+ P+ F R+KI+ +R+ +
Sbjct: 129 KAKQFQLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNPDSRGTFVSRSKIIQSMREYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 NGQGFLEVETPMMHSIPGGASARPFITHHNALDIELYMRIAIELHLKRLMVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V+G TI Y EI
Sbjct: 249 GRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMELTENLVAHIAKQVHGSTTITYGEHEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R + + VK+ATG+DF K + RAL + + S S G
Sbjct: 309 NLEPKWTRLHIVDAVKDATGVDF------WKEVSDEEARALA----KEHGVQVTESMSYG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 359 HVVNEFFEQKVEETLIQPTFIHGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQRAR E QV+ E+ + +D+ Y +D+DF+ ALEYGM
Sbjct: 419 LNDPIDQRARFEAQVK-----------------ERAEGNDEAHY---MDEDFLEALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
PP G+G+G+DRLVMLLTNS SIRDV+ FP ++ +
Sbjct: 459 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRTK 493
>gi|402814525|ref|ZP_10864119.1| lysine--tRNA ligase LysS [Paenibacillus alvei DSM 29]
gi|402508372|gb|EJW18893.1| lysine--tRNA ligase LysS [Paenibacillus alvei DSM 29]
Length = 501
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/516 (47%), Positives = 344/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++RT +A ++ + Y + EE VS+AGR++A+R
Sbjct: 17 IRRNKLDELRKLGVDPFGTKYERTTTAKEVLDKYDGMEK-EELQESGIEVSLAGRIMAKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + +F+ + +D+GDI+GV G++ +T+ GELS+
Sbjct: 76 GMGKASFAHIQDLSGRIQIYVRQDTIDEKKFEAYSL-LDLGDIIGVRGTVFKTKTGELSI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V IL+KSLLPLP+KYHGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 135 KVLELEILSKSLLPLPEKYHGLKDVEMRYRQRYVDLIMNPDVQQTFVTRSRIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSHGYLEVETPTLHAIAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY +MN+TE +V H A V G I YQ E+
Sbjct: 255 GRVYRNEGISTRHNPEFTMIELYEAYADYNDIMNLTENLVAHIAQEVLGTTKIQYQNHEV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
L WRR +M + VKE G+DF+ D ++AKE ++ +E
Sbjct: 315 DLTPQWRRVSMVDAVKEVKGVDFSAQMTDEEAHRIAKEHNVK-------------VEPHY 361
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++LN FE VE L+QPTFV +P+EISPLAK + + T+RFELFI RE ANA
Sbjct: 362 TFGHILNAFFEEFVEETLIQPTFVTGHPVEISPLAKKNDKDPRFTDRFELFIVAREHANA 421
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E Q+ E+ + +D ++E +DDDF+ ALE
Sbjct: 422 FSELNDPIDQRQRFEAQL------------------EEREHGNDEAHE--MDDDFIRALE 461
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+G+DRLVMLLTN+ SIRDV+ FP ++
Sbjct: 462 YGMPPTGGLGIGVDRLVMLLTNAPSIRDVLLFPHMR 497
>gi|425738721|ref|ZP_18856978.1| lysyl-tRNA ligase [Staphylococcus massiliensis S46]
gi|425478992|gb|EKU46174.1| lysyl-tRNA ligase [Staphylococcus massiliensis S46]
Length = 495
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 345/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++ELR +G++P+ +++R+ A+ L+ + + E E++ HVS AGR++ +
Sbjct: 11 VRRQKLDELREQGIDPFGERFERSSYASDLKAEWDTFSKDELKEKEDESHVSFAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G +Q+Y K+++ +QF+ K D+GDI+G+ G M +T GE+S
Sbjct: 71 RGKGKAGFAHVKDLTGQLQIYVRKDQVGDEQFEIWKG-ADLGDIVGIDGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ E + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNEESTETFINRSKILQEMRSY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNEKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +MN+TEE+V H A V G + Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYDDIMNLTEELVAHVAQKVLGTTKVQYGEET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE WRR + + VKEATG++F D+K +E A G+E IES
Sbjct: 310 IDLEPKWRRLHIVDAVKEATGVNF----YDVKTDEEAQALAKEHGIE------IESHMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHVLNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNAEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D DF+ ALEYG
Sbjct: 420 ELNDPIDQRERFEAQIVER------------------EQGNDEAHE--MDHDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|386320188|ref|YP_006016351.1| lysyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
gi|323465359|gb|ADX77512.1| lysyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
Length = 495
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 343/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++ELR G++P+ K++RT +A L+ + A E + E + H +AGR++ +
Sbjct: 11 VRRQKLQELRDLGIDPFGEKFERTGTAETLKAQWDQYAKEELAEKETESHTVIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ QF D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHIQDLSGQIQIYVRKDQVGDAQFGIWNT-ADLGDIVGVEGIMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ E F R++I+ E+R
Sbjct: 130 VKAKSFKLLSKALRPLPDKHHGLQDIEQRYRQRYLDLITNEESTQTFINRSRILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA A+PFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNEKGFLEVETPMMHQIAGGAAAKPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TEE+V H A V G ++ Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTEELVAHIARRVLGTTSVQYGDET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE WRR M + VKEATG+DF E+ +D KE A G+E ++ +
Sbjct: 310 INLEPQWRRLHMVDAVKEATGVDFYEVKSD----KEAHELAKAHGIE------VDDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRQRFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMR 493
>gi|319891471|ref|YP_004148346.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161167|gb|ADV04710.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
HKU10-03]
Length = 495
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 343/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++ELR G++P+ K++RT +A L+ + A E + E + H +AGR++ +
Sbjct: 11 VRRQKLQELRDLGIDPFGEKFERTGTAETLKAQWDQYAKEELAEKETESHTVIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ QF D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQVGDAQFGIWNT-ADLGDIVGVEGIMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ E F R++I+ E+R
Sbjct: 130 VKAKSFKLLSKALRPLPDKHHGLQDIEQRYRQRYLDLITNEESTQTFINRSRILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA A+PFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNEKGFLEVETPMMHQIAGGAAAKPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TEE+V H A V G ++ Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTEELVAHIARRVLGTTSVQYGDET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE WRR M + VKEATG+DF E+ +D KE A G+E ++ +
Sbjct: 310 INLEPQWRRLHMVDAVKEATGVDFYEVKSD----KEAHELAKAHGIE------VDDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRQRFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMR 493
>gi|404417283|ref|ZP_10999086.1| lysyl-tRNA ligase [Staphylococcus arlettae CVD059]
gi|403490381|gb|EJY95923.1| lysyl-tRNA ligase [Staphylococcus arlettae CVD059]
Length = 495
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/514 (49%), Positives = 339/514 (65%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ ++DRT A+QL + E + E + V +AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGKRFDRTAEADQLHHDWDAFTKDELHDKEEESQVVIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ DQF + D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQF-AIWNSSDLGDIVGVDGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ E F R+KI+ E+R
Sbjct: 130 VKAKSFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNQESTQTFINRSKILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP+L AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMLHQIAGGAAARPFVTHHNALDVTLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V A V G + Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMDLTESMVREIANNVFGSAKVQYGEDT 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE PW+R M + VKE TG++F E+ D +E A G+E I +
Sbjct: 310 IDLESPWKRVHMVDAVKETTGVNFYEVETD----EEAKNLAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTFV +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLMQPTFVYGHPIEISPLAKKNPEDPRYTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + +E +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRERFEAQLVEK------------------EEGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSASIRDVLLFPTMK 493
>gi|403382766|ref|ZP_10924823.1| lysyl-tRNA ligase [Paenibacillus sp. JC66]
Length = 496
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 339/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++RTH+A + Y + EE N VSVAGR++ +R
Sbjct: 13 IRRDKLDELRQLGVDPFGQKYERTHTARDIINKYDQ-STKEELADLNAEVSVAGRIMQKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D +G IQ+Y ++ + ++ + +DIGD++GV G + +T+ GE S+
Sbjct: 72 GMGKASFAHIQDLTGKIQIYVRQDSIDEVEYKAFDI-LDIGDLVGVKGVVFKTKTGETSI 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V S +LTKSL PLPDK+HGL DV+ RYR+RYVD+I EV D F R+KI+ +R+ +
Sbjct: 131 KVQSLQVLTKSLYPLPDKFHGLKDVETRYRERYVDLIVNEEVKDTFITRSKIIQSMRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP L AGGA A+PF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DSKGYLEVETPTLHTIAGGAAAKPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TEE+V H A V G I+YQG EI
Sbjct: 251 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMRLTEELVAHIAQDVLGTTKINYQGHEI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PWRR +M +++ GIDF + +D + L + K +E + G
Sbjct: 311 DLAPPWRRVSMVEAIRDVVGIDFQKDMSDEEAI----------ALAKQHKVPVEPGMTFG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N+ FE+ VE L+QPTF+ +P+ ISPLAK T+RFELFI RE ANAF+E
Sbjct: 361 HIVNQFFEMFVEETLIQPTFITGHPVAISPLAKKSEADPRFTDRFELFIVAREHANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q++ + +L + H +D+DF+ ALEYGM
Sbjct: 421 LNDPIDQRERFESQLK----------------ERELGNDEAH----MMDEDFIHALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNSASIRDV+ FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTNSASIRDVLLFPHMR 493
>gi|354585828|ref|ZP_09004659.1| lysyl-tRNA synthetase [Paenibacillus lactis 154]
gi|353184153|gb|EHB49681.1| lysyl-tRNA synthetase [Paenibacillus lactis 154]
Length = 505
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 347/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++R H A + + Y L+ EE + + V++AGR++A+R
Sbjct: 22 IRRNKLDELRKLGIDPFGGKYEREHHAGDIVKAYDALSK-EELDEKQVEVNLAGRIMAKR 80
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + Q++ + +D+GDI+GV G + +T+ GEL+V
Sbjct: 81 GMGKASFAHIQDLSGRIQIYVRQDTVAEAQYEAFSI-LDLGDIIGVKGVLFKTKTGELTV 139
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+K+HGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 140 KVMEIEVLSKSLYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYL 199
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 200 DSLGYLEVETPTLHSIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 259
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I+YQG E+
Sbjct: 260 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENMIAHIAQEVLGTQVINYQGHEV 319
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ WRR +M + VKE G+DF +++ E R L + K +E + G
Sbjct: 320 NLKPQWRRVSMVDAVKEVVGVDFG-----VQMTNEEAHR-----LAKEHKVPVEPHMTFG 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV +P+EISPLAK + T+RFELFI RE ANAFSE
Sbjct: 370 HILNAFFEQFVEETLIQPTFVTGHPVEISPLAKKNDADPRFTDRFELFIVAREHANAFSE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 430 LNDPIDQRQRFEAQLKEK------------------EQGNDEAHE--MDEDFLRALEYGM 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLT+S SIRDV+ FP ++
Sbjct: 470 PPTGGLGIGIDRLIMLLTDSPSIRDVLLFPHMR 502
>gi|337751759|ref|YP_004645921.1| LysS protein [Paenibacillus mucilaginosus KNP414]
gi|336302948|gb|AEI46051.1| LysS [Paenibacillus mucilaginosus KNP414]
Length = 511
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/516 (46%), Positives = 349/516 (67%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELRS G++P+ K++RTH A ++ + Y + EE + VS+AGR++ +R
Sbjct: 26 IRRGKLDELRSMGIDPFGQKYERTHHAAEITKAYEEKSK-EELDELKAEVSIAGRIMQKR 84
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D +G IQ+Y + + + + +DIGDI+G+ G++ +T+ GELSV
Sbjct: 85 EMGKAGFAHLQDITGKIQIYVRADAVGETPYKAYDL-LDIGDIIGIRGTVFKTKTGELSV 143
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+S V+L+KSLLPLP+KYHGL DV+ RYRQRYVD+I +V F R+KI+ +R+ +
Sbjct: 144 KASSVVVLSKSLLPLPEKYHGLKDVELRYRQRYVDLIMNQDVQQTFIARSKIIQSMRRYL 203
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++LG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 204 DALGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLIVGGMEKVYEI 263
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TEE++ A V G TI YQG E+
Sbjct: 264 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMKLTEEMIARIAQEVLGTTTIMYQGHEV 323
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR TM + +KE G+DF+ ++++ E R L + K +E + + G
Sbjct: 324 NLAPQWRRVTMVDAIKEVVGVDFS-----VQMSDEEAHR-----LAKEHKVPVEPTMTFG 373
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N+ FE VE L+QPTF+ +P+ ISPLAK T+RFELFI RE ANAF+E
Sbjct: 374 HIVNQFFETFVEETLIQPTFITGHPVAISPLAKKSDADPRFTDRFELFIVAREHANAFTE 433
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R AA + E+ ++ +D ++E +D+DFV ALEYGM
Sbjct: 434 LNDPIDQRERF-----------AAQLVER-------EQGNDEAHE--MDEDFVRALEYGM 473
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLT++ SIRDV+ FP+++ +Q
Sbjct: 474 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPLMRERQ 509
>gi|295694794|ref|YP_003588032.1| lysyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
gi|295410396|gb|ADG04888.1| lysyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
Length = 513
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/531 (46%), Positives = 353/531 (66%), Gaps = 38/531 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLA---NGEE 106
+S S+ + + + +R++KVE+L+ G+EP+ ++W TH+A Q+ H A + EE
Sbjct: 16 TSEELSSQEIDHLMQVRLEKVEKLQEMGVEPFGHRWVPTHTAAQVL----HFAGDRSKEE 71
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
E HV VAGR++ +R GK +F + D SG IQ+Y +R+ + Q+ +D+GD
Sbjct: 72 LEQEGLHVRVAGRIMTKRGHGKASFAHILDRSGQIQIYVRLDRVGEFAY-QVFDMLDLGD 130
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV G + RT +GE+++ + +LTKSL PLP K+HGL DV+ RYR RYVD+I P+V
Sbjct: 131 IIGVEGEVLRTNRGEVTIFADRVELLTKSLRPLPTKWHGLKDVELRYRHRYVDLIVNPQV 190
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+ F R++I+ +R+ ++ GF+EVETP +Q AGGA ARPFVT+HN+L +LY+RIA
Sbjct: 191 RETFVLRSRIIRVMRRFLDDQGFLEVETPTMQSVAGGAAARPFVTHHNALNMELYMRIAM 250
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG E++YEIGR+FRNEG+ST+HNPEFT +E+Y+AY+D++ MM++TE ++
Sbjct: 251 ELHLKRLIVGGLERVYEIGRVFRNEGISTKHNPEFTMMELYQAYADFRDMMDLTENLIVT 310
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A V G I YQG + L PWRRE+M +L++ TGIDF + V+ R L
Sbjct: 311 IAREVLGTTQIQYQGQAVDLTPPWRRESMMDLIQHYTGIDFRQ------VSGTEQARELA 364
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
+ K I+ G+++NE FE VE LVQPTFV YP+EISPLAK LT
Sbjct: 365 ENCGVK----IDPGMEFGHIVNECFEQKVEQHLVQPTFVYGYPVEISPLAKRSAADPRLT 420
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
+RFELFI GRE ANAFSEL DP+DQR R +Q+ E+RA + +D
Sbjct: 421 DRFELFIVGREHANAFSELNDPVDQRKRFLDQL----EERA--------------KGNDE 462
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++E +D+DFV ALEYGMPP G+G+G+DRLVMLLT+ ASIRDV+ FP+++
Sbjct: 463 AHE--MDEDFVMALEYGMPPTGGLGIGVDRLVMLLTDQASIRDVLLFPLMR 511
>gi|325829779|ref|ZP_08163237.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
gi|325487946|gb|EGC90383.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
Length = 647
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/514 (50%), Positives = 331/514 (64%), Gaps = 34/514 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R K E L + G +PY + + +H L E Y L +G S D V VAGRV+A+
Sbjct: 18 AVRRAKREALMAAGKDPYGHAFAYSHHLADLAEQYADLEDG---ASTEDEVKVAGRVMAK 74
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GKLAFL LRD +G +QL+C L D F +LK +D+GD +GV G+M RT++G+LS
Sbjct: 75 RDQGKLAFLELRDSTGDMQLFCRINALGEDAFAELKD-LDVGDWIGVEGTMMRTKRGQLS 133
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF +L+KSL PLP+K+HGL D + RYRQRYVD++ EV D F KR K+VS IR+
Sbjct: 134 VSVASFELLSKSLRPLPEKFHGLADKETRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRY 193
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E G+ EVETP+L GGA ARPFVT+HN+L +D YLRIATELHLKR+L+GGFEK++E
Sbjct: 194 MEDHGYYEVETPILHPILGGANARPFVTHHNALDKDFYLRIATELHLKRLLVGGFEKVFE 253
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR FRNEG+ HNPEFTT+E Y+A+SD + MM +T+ ++ ALA G L ++YQG +
Sbjct: 254 IGRQFRNEGMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQ 313
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L WRR TM L E G D V+ + T L D LE E++
Sbjct: 314 VDLSGSWRRATMIELASEGAGED---------VSFQRTRDELVDILERNGGHA-EAAWGK 363
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G L+ E+FE V E KL+QPTFV ++PIE+SPLAK LTERFELFICG E ANAF
Sbjct: 364 GKLIAEIFEAVAEEKLIQPTFVTEHPIEVSPLAKKLAGDPNLTERFELFICGHEYANAFG 423
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ R QV E DD + + DDD+V ALEYG
Sbjct: 424 ELNDPVDQAERFRAQV------------------EAKDLGDDEA--MGYDDDYVRALEYG 463
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPPA G G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 MPPAGGCGIGIDRLVMLLTDAPSIRDVLLFPHMR 497
>gi|312134580|ref|YP_004001918.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311774631|gb|ADQ04118.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 495
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/516 (48%), Positives = 346/516 (67%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK++EL+ PY K+D TH + ++E + E VSVAGR++++R
Sbjct: 18 RIKKLKELQQNKYNPYEKVKYDPTHYSTDIKENFEEF--------EGKFVSVAGRMLSKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++++ K + DIGDI+GV G + +T KGE+S+
Sbjct: 70 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL DVD RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 130 KAKEIEMLTKCLRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 190 DDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MM++TEE++T A V G L I YQG EI
Sbjct: 250 GRVFRNEGISIKHNPEFTTIEVYQAYADYKDMMDLTEELITTVAQEVLGTLKITYQGQEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM +K+ G+DF + L K+AK+ G+E +E +
Sbjct: 310 DLTPPWQRLTMVEAIKKYVGVDFENISSLDEAKKIAKDI-------GIE------VEENW 356
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NEVFE VE L+QPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 357 QVGHIINEVFEKKVEDFLIQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 416
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 417 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 456
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 492
>gi|257791982|ref|YP_003182588.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|317489991|ref|ZP_07948483.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
gi|257475879|gb|ACV56199.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|316910989|gb|EFV32606.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
Length = 647
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/514 (50%), Positives = 331/514 (64%), Gaps = 34/514 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R K E L + G +PY + + +H L E Y L +G S D V VAGRV+A+
Sbjct: 18 AVRRAKREALMAAGKDPYGHAFAYSHHLADLAEQYADLEDG---ASTEDEVKVAGRVMAK 74
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GKLAFL LRD +G +QL+C L D F +LK +D+GD +GV G+M RT++G+LS
Sbjct: 75 RDQGKLAFLELRDSTGDMQLFCRINALGEDAFAELKD-LDVGDWIGVEGTMMRTKRGQLS 133
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF +L+KSL PLP+K+HGL D + RYRQRYVD++ EV D F KR K+VS IR+
Sbjct: 134 VSVASFELLSKSLRPLPEKFHGLADKETRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRY 193
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E G+ EVETP+L GGA ARPFVT+HN+L +D YLRIATELHLKR+L+GGFEK++E
Sbjct: 194 MEDHGYYEVETPILHPILGGANARPFVTHHNALDKDFYLRIATELHLKRLLVGGFEKVFE 253
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR FRNEG+ HNPEFTT+E Y+A+SD + MM +T+ ++ ALA G L ++YQG +
Sbjct: 254 IGRQFRNEGMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQ 313
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L WRR TM L E G D V+ + T L D LE E++
Sbjct: 314 VDLSGSWRRATMIELASEGAGED---------VSFQRTRDELVDILERNGGHA-EAAWGK 363
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G L+ E+FE V E KL+QPTFV ++PIE+SPLAK LTERFELFICG E ANAF
Sbjct: 364 GKLIAEIFEAVAEEKLIQPTFVTEHPIEVSPLAKKLAGDPNLTERFELFICGHEYANAFG 423
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ R QV E DD + + DDD+V ALEYG
Sbjct: 424 ELNDPVDQAERFRAQV------------------EAKDLGDDEA--MGYDDDYVRALEYG 463
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPPA G G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 MPPAGGCGIGIDRLVMLLTDAPSIRDVLLFPHMR 497
>gi|27469184|ref|NP_765821.1| lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57866087|ref|YP_187752.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|242241602|ref|ZP_04796047.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|251809824|ref|ZP_04824297.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875448|ref|ZP_06284320.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|293366159|ref|ZP_06612846.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417647513|ref|ZP_12297349.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU144]
gi|417657894|ref|ZP_12307546.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU028]
gi|417658407|ref|ZP_12308038.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU045]
gi|417909696|ref|ZP_12553430.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU037]
gi|417910408|ref|ZP_12554128.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU105]
gi|417912764|ref|ZP_12556447.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU109]
gi|418603837|ref|ZP_13167215.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU041]
gi|418606398|ref|ZP_13169676.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU057]
gi|418610306|ref|ZP_13173422.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU065]
gi|418611304|ref|ZP_13174395.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU117]
gi|418616844|ref|ZP_13179767.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU120]
gi|418620915|ref|ZP_13183708.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU123]
gi|418623732|ref|ZP_13186433.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU125]
gi|418626907|ref|ZP_13189501.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU126]
gi|418628388|ref|ZP_13190935.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU127]
gi|418664867|ref|ZP_13226331.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU081]
gi|419772652|ref|ZP_14298681.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
gi|420166948|ref|ZP_14673625.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
gi|420173824|ref|ZP_14680312.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
gi|420174323|ref|ZP_14680775.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
gi|420182205|ref|ZP_14688345.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
gi|420186694|ref|ZP_14692736.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
gi|420193842|ref|ZP_14699688.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
gi|420196100|ref|ZP_14701879.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
gi|420198420|ref|ZP_14704132.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
gi|420201339|ref|ZP_14706962.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
gi|420208026|ref|ZP_14713507.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
gi|420210542|ref|ZP_14715966.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
gi|420212952|ref|ZP_14718294.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
gi|420215491|ref|ZP_14720757.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH05005]
gi|420218215|ref|ZP_14723312.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH05001]
gi|420221266|ref|ZP_14726217.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH04008]
gi|420223797|ref|ZP_14728686.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH08001]
gi|420226252|ref|ZP_14731073.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH06004]
gi|420228673|ref|ZP_14733419.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH05003]
gi|420231052|ref|ZP_14735728.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH04003]
gi|420233658|ref|ZP_14738265.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH051668]
gi|420236088|ref|ZP_14740618.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH051475]
gi|421608985|ref|ZP_16050194.1| lysyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
gi|38258353|sp|Q8CQV5.1|SYK_STAES RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71153566|sp|Q5HRN7.1|SYK_STAEQ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|27316733|gb|AAO05908.1|AE016751_203 lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57636745|gb|AAW53533.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|242234983|gb|EES37294.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|251806692|gb|EES59349.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295805|gb|EFA88327.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|291319753|gb|EFE60112.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329723930|gb|EGG60455.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU144]
gi|329733011|gb|EGG69350.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU028]
gi|329737885|gb|EGG74113.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU045]
gi|341652630|gb|EGS76414.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU037]
gi|341656182|gb|EGS79904.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU105]
gi|341657129|gb|EGS80825.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU109]
gi|374404845|gb|EHQ75809.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU065]
gi|374406814|gb|EHQ77694.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU041]
gi|374408036|gb|EHQ78876.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU057]
gi|374409962|gb|EHQ80729.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU081]
gi|374820432|gb|EHR84520.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU120]
gi|374823742|gb|EHR87735.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU117]
gi|374829766|gb|EHR93562.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU125]
gi|374830959|gb|EHR94712.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU123]
gi|374831147|gb|EHR94894.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU126]
gi|374837853|gb|EHS01415.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU127]
gi|383359097|gb|EID36532.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
gi|394231861|gb|EJD77483.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
gi|394239344|gb|EJD84788.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
gi|394245119|gb|EJD90440.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
gi|394250447|gb|EJD95635.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
gi|394258864|gb|EJE03737.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
gi|394259366|gb|EJE04212.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
gi|394262255|gb|EJE07031.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
gi|394264499|gb|EJE09183.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
gi|394273037|gb|EJE17478.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
gi|394274769|gb|EJE19177.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
gi|394276069|gb|EJE20422.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
gi|394277454|gb|EJE21777.1| lysine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
gi|394282177|gb|EJE26386.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH05005]
gi|394284592|gb|EJE28697.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH05001]
gi|394284977|gb|EJE29070.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH04008]
gi|394286761|gb|EJE30746.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH08001]
gi|394292476|gb|EJE36219.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH06004]
gi|394294442|gb|EJE38123.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH05003]
gi|394295732|gb|EJE39371.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH04003]
gi|394299788|gb|EJE43319.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH051668]
gi|394301443|gb|EJE44900.1| lysine--tRNA ligase [Staphylococcus epidermidis NIH051475]
gi|406655382|gb|EKC81812.1| lysyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
Length = 495
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 348/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ ++++R+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFNRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKE TG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEVTGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|415883975|ref|ZP_11546004.1| lysyl-tRNA synthetase [Bacillus methanolicus MGA3]
gi|387591770|gb|EIJ84087.1| lysyl-tRNA synthetase [Bacillus methanolicus MGA3]
Length = 494
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 347/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR KGL+P+ +++RTH A +L + Y L EE ++N V++AGR++ +R
Sbjct: 12 VRRDKMNQLREKGLDPFGKRFERTHHAQELIKAYGDLEK-EEIEAKNISVTIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y + + +Q++ + D+GDI+GV+G++ +T+ GELSV
Sbjct: 71 GKGKAGFAHIQDLTGQIQIYVRLDTVGEEQYEIFNM-ADLGDIVGVTGTLFKTKVGELSV 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF++LTKSL PLP+K+HGL DV++RYRQRY+D+I E D F R++I+ +R+ +
Sbjct: 130 KVESFILLTKSLRPLPEKFHGLKDVEQRYRQRYLDLIMNNESKDTFITRSRIIQSMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DDHGYLEVETPMMHAIAGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +++H A V G TI Y E+
Sbjct: 250 GRVFRNEGVSTRHNPEFTMIELYEAYADYRDIMKLTENLISHIAQEVLGTTTIQYGEHEV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + +KE TG+DF K RAL + I + G
Sbjct: 310 DLKPEWKRLHMVDAIKEYTGVDF------WKEMSTEEARALA----KEHNVEINDNMLFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 360 HIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVGREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +DDDF+ ALEYGM
Sbjct: 420 LNDPIDQRERFEAQLKER------------------EQGNDEAH--MMDDDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 460 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 492
>gi|312128201|ref|YP_003993075.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311778220|gb|ADQ07706.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 497
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/516 (48%), Positives = 345/516 (66%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK++EL+ PY K+D TH + ++E + E V VAGR++++R
Sbjct: 20 RIKKLKELQQNKYNPYEKVKYDPTHYSADIKENFEVF--------EGKFVCVAGRMLSKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++++ K + DIGDI+GV G + +T KGE+SV
Sbjct: 72 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL D+D RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 132 KAKEIEMLTKCLRPLPEKWHGLRDIDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 192 DDRGFLEVETPVLSPVAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MMN+TEE++T A V G L I YQG EI
Sbjct: 252 GRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM +K+ G+DF N + K+AK+ G+E +E +
Sbjct: 312 DLTPPWQRLTMVEAIKKYVGVDFENVNSIDEARKIAKDL-------GIE------VEENW 358
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE+FE VE LVQPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 359 QVGHIINEIFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCRELANA 418
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 419 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 458
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494
>gi|315660315|ref|ZP_07913168.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
gi|315494604|gb|EFU82946.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
Length = 522
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/534 (45%), Positives = 353/534 (66%), Gaps = 32/534 (5%)
Query: 45 RNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANG 104
+N++ S + + +R +K++EL G++P+ +++RT A+ L+ + +
Sbjct: 18 KNKKFKGESRMSEEMNDQMQVRRQKLQELIDLGIDPFGKRFERTAMADDLKGAWDQYSKE 77
Query: 105 EESNSEND-HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVD 163
E E + HV++AGR++ +R GK F ++D SG IQ+Y K+++ +QFD K+ D
Sbjct: 78 ELHGKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWKI-AD 136
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
+GDI+G+ G M +T GEL+V +F +L+K+L PLPDK+HGL D+++RYRQRY+D+I+
Sbjct: 137 LGDIVGIDGVMFKTNTGELTVKAKTFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITN 196
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
E F R+KI+ E+R + + GF+EVETP++ GGA ARPFVT+HN+L LY+R
Sbjct: 197 KESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMMHQIPGGAAARPFVTHHNALDATLYMR 256
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IA ELHLKR+++GG EK+YEIGR+FRNEG+STRHNPEFT IE+YEAY+D+ +M++TE +
Sbjct: 257 IAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADFHDIMDLTESL 316
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR 403
+ H A V G + Y G EI LE W R + + VKEATG+DF ++ +D +E
Sbjct: 317 IRHIAQEVFGSAKVQYNGEEIDLESSWTRLHIVDAVKEATGVDFYQVKSD----EEAKAL 372
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
A G+E I+ + G++LNE FE VE L+QPTF+ +PIEISPLAK +
Sbjct: 373 AKEHGIE------IKENMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDP 426
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T+RFELFI GRE ANAF+EL DP+DQR R E A + EK+ +
Sbjct: 427 RFTDRFELFIVGREHANAFTELNDPIDQRERFE-----------AQLVEKA-------QG 468
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D ++E +D+DF+ ALEYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 469 NDEAHE--MDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 520
>gi|258510227|ref|YP_003183661.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476953|gb|ACV57272.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 495
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/515 (47%), Positives = 343/515 (66%), Gaps = 31/515 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R++K+ LR +G++P+ +++ TH A + + + E EN V +AGR+VARR
Sbjct: 10 RLEKMNALRDRGIDPFGGRYEVTHHAADIHR-FGEGKDQAELERENLRVRIAGRLVARRG 68
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F L D +G IQ+Y + + L + +D + VD+GDILGV G++ RT +GE++VL
Sbjct: 69 HGKATFAVLNDVTGNIQIYAKYDVLGPEAYDVFQHLVDLGDILGVEGTVFRTNRGEITVL 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
LTKSL PLP+K+HGL DV+ RYRQRY+D+I P+V +F R++I+ EIR+ ++
Sbjct: 129 AEQVTFLTKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPDVRQIFIARSRIIQEIRRFLD 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP L A GA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEIG
Sbjct: 189 GQGFLEVETPTLHTVASGAHARPFITHHNALDMDLYLRIAIELHLKRLIVGGLERVYEIG 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R++RNEG+STRHNPEFT +E+Y+AY+D+ +M++TE +V H A AV GKL + Y +
Sbjct: 249 RVYRNEGVSTRHNPEFTMLELYQAYADFHDIMDLTENMVRHAAKAVIGKLHLPYGDHVVD 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
LE P++R + +LV E TG+DF + +D +E A G++ IE + G+
Sbjct: 309 LESPFKRAHIADLVLEHTGVDFRRVTSD----EEARRLAAEHGVK------IEPHMTYGH 358
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
+LNE FE VE KL+QPTFV +P+EISPLAK + T+RFELFI GRE ANAFSEL
Sbjct: 359 ILNEFFEQRVEDKLIQPTFVYGHPVEISPLAKKNADDPRFTDRFELFIVGREHANAFSEL 418
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQR R Q+R EK + E+ + LD+DF+TALE+GMP
Sbjct: 419 NDPIDQRERFLAQLR-----------EKEAGNEEAQ---------ALDEDFLTALEHGMP 458
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
P G+G+GIDRLVMLLT SIRDV+ FP+++ +Q
Sbjct: 459 PTGGLGVGIDRLVMLLTGQPSIRDVLLFPLMRERQ 493
>gi|83589024|ref|YP_429033.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|123739358|sp|Q2RM49.1|SYK_MOOTA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|83571938|gb|ABC18490.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 489
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/517 (47%), Positives = 342/517 (66%), Gaps = 39/517 (7%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R++K+ +L+ G+EPY ++ THS ++E + L E V++AGR++A
Sbjct: 11 AVRLEKLHQLQEAGIEPYGGPFEVTHSTTAIRERFDEL--------EGQEVALAGRLLAI 62
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R+ GK +F L+D G +QLY + + ++ + +DIGDI+GV G + RT +GE+S
Sbjct: 63 RSHGKASFADLQDREGRLQLYIRLDNVGPGIYELFQK-LDIGDIVGVRGKVFRTHRGEIS 121
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V +L KSL PLP+K+HGL DVD RYRQRY+D+I PEV VF RA+I+ IR
Sbjct: 122 VEVRQLTLLCKSLRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKQVFITRARIIRAIRSF 181
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EVETP + AGGA ARPF+T+HN+L DLYLRIA ELHLKR+L+GG EK+YE
Sbjct: 182 LDNRGFLEVETPTMHPIAGGAAARPFITHHNALDIDLYLRIALELHLKRLLVGGLEKVYE 241
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GRIFRNEG+ST+HNPEFT +E+Y+AY+DY MM++ EE+V + A G + YQG
Sbjct: 242 MGRIFRNEGISTKHNPEFTMLELYQAYADYYVMMDLLEEMVAYVAREALGTTVVTYQGDR 301
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L PW R TM +K+ G+DF++ L A++ A+ GLE IE
Sbjct: 302 LDLTPPWPRLTMLEAIKKYYGVDFDQ----LPTAEDARRAAISLGLE------IEPGMER 351
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++NEVFE VEP L+QPTF+LDYP+ ISPLAK + + T RFE FI GRE+ANAFS
Sbjct: 352 GKIINEVFEATVEPHLIQPTFILDYPVAISPLAKRKKENPDFTYRFEAFIAGRELANAFS 411
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q ++E+++ E+ +D+DF+ ALEYG
Sbjct: 412 ELNDPIDQRRRFEAQ-----------MAERAAGDEEAH---------MMDEDFLQALEYG 451
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPPA GMG+GIDRLVM+LT+S SIRDVI FP ++ ++
Sbjct: 452 MPPAGGMGIGIDRLVMVLTDSPSIRDVILFPTMRPKE 488
>gi|49482744|ref|YP_039968.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
gi|295427052|ref|ZP_06819689.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|418581188|ref|ZP_13145272.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418891082|ref|ZP_13445201.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896899|ref|ZP_13450973.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418901585|ref|ZP_13455635.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908267|ref|ZP_13462276.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG149]
gi|418917779|ref|ZP_13471736.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922146|ref|ZP_13476064.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982888|ref|ZP_13530594.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985014|ref|ZP_13532705.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1500]
gi|56749426|sp|Q6GJF4.1|SYK_STAAR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|49240873|emb|CAG39540.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
gi|295129055|gb|EFG58684.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|377700677|gb|EHT25012.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377703398|gb|EHT27713.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708228|gb|EHT32518.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377712232|gb|EHT36453.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377733156|gb|EHT57202.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377736326|gb|EHT60352.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377749414|gb|EHT73363.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377757068|gb|EHT80963.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG149]
gi|377762386|gb|EHT86251.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 495
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 342/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q ++EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LAEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|418662398|ref|ZP_13223948.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-122]
gi|375036449|gb|EHS29520.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-122]
Length = 495
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNHEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|419770295|ref|ZP_14296377.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-250]
gi|383357340|gb|EID34813.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-250]
Length = 495
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 347/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++ R+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFKRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKE TG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEVTGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|70727492|ref|YP_254408.1| lysyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
gi|123762274|sp|Q4L3H5.1|SYK_STAHJ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|68448218|dbj|BAE05802.1| Lysyl-tRNA synthetase class II [Staphylococcus haemolyticus
JCSC1435]
Length = 496
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/514 (46%), Positives = 347/514 (67%), Gaps = 31/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++R+ +A++L+ + + E + E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERSATASELKSQWDEFSKEELHDKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ + FD L D+GDI+G+ G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLTGQIQIYVRKDQIGEEDFDNLWKGADLGDIVGIEGVMFKTNTGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +F +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 131 VKAKTFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFINRSKIIQEMRNY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 191 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 251 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNEEE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF ++ +D +E A G+E I ++
Sbjct: 311 IDLESAWTRLHIVDAVKEATGVDFYQIKSD----EEAIAAAKEHGIE------ITNNMKY 360
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 361 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 420
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E A + EK+ + +D ++E +D+D++ ALEYG
Sbjct: 421 ELNDPIDQRERFE-----------AQLVEKA-------QGNDEAHE--MDEDYIEALEYG 460
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 461 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 494
>gi|381210556|ref|ZP_09917627.1| lysyl-tRNA synthetase [Lentibacillus sp. Grbi]
Length = 493
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/512 (48%), Positives = 345/512 (67%), Gaps = 32/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K+E KG+ P+ K++RTH A L IY + EE ++D V++AGR++ +R
Sbjct: 12 RREKLEFYHEKGVHPFGGKFNRTHYAADLASIYDQFSK-EELEEKDDEVTIAGRIMTKRG 70
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D SG IQ+Y K+ + D ++ + D+GDI+GV+G M RT+ GELSV
Sbjct: 71 KGKAGFAHVQDLSGQIQIYVRKDMIGEDAYEVFQS-ADMGDIVGVTGLMFRTKVGELSVK 129
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
F +LTKSL PLP+KYHGL D+++RYRQRY+D+I+ P+ + F R+KI+ +R+ ++
Sbjct: 130 AVKFTLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNPDSKETFILRSKIIQSMRRYLD 189
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP++ G GGA ARPF TYHN+L LY+RIA ELHLKR+++GG EK+YEIG
Sbjct: 190 GQGFLEVETPMMHGIPGGAAARPFETYHNALEIPLYMRIAIELHLKRLIVGGMEKVYEIG 249
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+STRHNPEFT +E+YEAY+D+ +M +TE +++H A V G +TI Y EI
Sbjct: 250 RVFRNEGVSTRHNPEFTMMELYEAYADFHDVMTLTENLISHIANEVLGTMTIHYDDEEIN 309
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
LE WRR + + VKE TG+DF K++ E L+ L ++ ++ S + G+
Sbjct: 310 LEPEWRRMHIVDAVKEYTGVDFWP-----KMSNEQALK-----LAKENGIAVDESMTYGH 359
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
+LNE FE VE LVQPTF+ +P+EISPLAK + + A T+RFELF+ GRE ANAFSEL
Sbjct: 360 ILNEFFEQKVEESLVQPTFIYGHPVEISPLAKRNDKDARFTDRFELFVVGREHANAFSEL 419
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQR R E QV++ N +D ++ +D+DF+ ALEYGMP
Sbjct: 420 NDPIDQRERFEVQVKERN------------------AGNDEAH--LMDEDFLEALEYGMP 459
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 PTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 491
>gi|416842452|ref|ZP_11905033.1| lysyl-tRNA synthetase [Staphylococcus aureus O11]
gi|323438751|gb|EGA96491.1| lysyl-tRNA synthetase [Staphylococcus aureus O11]
Length = 495
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDTRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|148266976|ref|YP_001245919.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150393023|ref|YP_001315698.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|151220691|ref|YP_001331513.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|253730985|ref|ZP_04865150.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735252|ref|ZP_04869417.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
gi|257424629|ref|ZP_05601057.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427295|ref|ZP_05603696.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429932|ref|ZP_05606318.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
gi|257432634|ref|ZP_05608996.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
gi|257435538|ref|ZP_05611588.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
gi|257794243|ref|ZP_05643222.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|258407240|ref|ZP_05680385.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|258420792|ref|ZP_05683728.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|258429634|ref|ZP_05688308.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|258446096|ref|ZP_05694257.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|258448004|ref|ZP_05696134.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|258452802|ref|ZP_05700797.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|258453850|ref|ZP_05701823.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|282895125|ref|ZP_06303345.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|282903103|ref|ZP_06310995.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|282904892|ref|ZP_06312752.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907839|ref|ZP_06315677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910155|ref|ZP_06317961.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913345|ref|ZP_06321136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282915835|ref|ZP_06323603.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
gi|282918298|ref|ZP_06326038.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
gi|282923049|ref|ZP_06330735.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
gi|282925592|ref|ZP_06333245.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|283768952|ref|ZP_06341861.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
H19]
gi|283957307|ref|ZP_06374765.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500394|ref|ZP_06666246.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
gi|293509333|ref|ZP_06668049.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
gi|293515921|ref|ZP_06670611.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|297591571|ref|ZP_06950208.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|304380535|ref|ZP_07363211.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|384861179|ref|YP_005743899.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384865887|ref|YP_005746083.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|386728273|ref|YP_006194656.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 71193]
gi|404477901|ref|YP_006709331.1| lysyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
gi|418980433|ref|ZP_13528214.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus DR10]
gi|422742488|ref|ZP_16796492.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
gi|422747241|ref|ZP_16801159.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
gi|424768358|ref|ZP_18195643.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
gi|147740045|gb|ABQ48343.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149945475|gb|ABR51411.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|150373491|dbj|BAF66751.1| lysyl-tRNA synthetase, class-2 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|253725297|gb|EES94026.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726812|gb|EES95541.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
gi|257272656|gb|EEV04776.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275946|gb|EEV07414.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279448|gb|EEV10043.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
gi|257282499|gb|EEV12632.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
gi|257285175|gb|EEV15292.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
gi|257788215|gb|EEV26555.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|257841198|gb|EEV65647.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|257843184|gb|EEV67597.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|257849693|gb|EEV73660.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|257855073|gb|EEV78015.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|257858694|gb|EEV81567.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|257859488|gb|EEV82341.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|257864021|gb|EEV86776.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|282314568|gb|EFB44955.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
gi|282317864|gb|EFB48233.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
gi|282320326|gb|EFB50668.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
gi|282322816|gb|EFB53136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282326003|gb|EFB56309.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328315|gb|EFB58590.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282332009|gb|EFB61518.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282592496|gb|EFB97508.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|282596529|gb|EFC01489.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|282762543|gb|EFC02683.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|283461133|gb|EFC08219.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
H19]
gi|283791231|gb|EFC30041.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921329|gb|EFD98387.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|291096354|gb|EFE26614.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
gi|291467878|gb|EFF10388.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
gi|297575440|gb|EFH94157.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|302750408|gb|ADL64585.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340939|gb|EFM06863.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312436392|gb|ADQ75463.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|320139396|gb|EFW31274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144173|gb|EFW35941.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
gi|379991758|gb|EIA13222.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus DR10]
gi|384229566|gb|AFH68813.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 71193]
gi|402348632|gb|EJU83613.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
gi|404439390|gb|AFR72583.1| lysyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
gi|408422948|emb|CCJ10359.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408424936|emb|CCJ12323.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408426925|emb|CCJ14288.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408428913|emb|CCJ26078.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408430901|emb|CCJ18216.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408432895|emb|CCJ20180.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408434884|emb|CCJ22144.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408436869|emb|CCJ24112.1| Lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
Length = 515
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 344/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 31 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 90
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 91 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 149
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 150 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 209
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 210 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 269
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 270 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 329
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 330 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 379
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 380 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 439
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ + +D ++E +D+D++ ALEYG
Sbjct: 440 ELNDPIDQKGRFEAQ-----------LVEKA-------QGNDEAHE--MDEDYIEALEYG 479
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 480 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 513
>gi|289551683|ref|YP_003472587.1| lysyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
gi|385785230|ref|YP_005761403.1| lysyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
gi|418416050|ref|ZP_12989252.1| lysyl-tRNA synthetase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289181214|gb|ADC88459.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
HKU09-01]
gi|339895486|emb|CCB54815.1| lysyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
gi|410872960|gb|EKS20897.1| lysyl-tRNA synthetase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 495
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 347/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++RT A+ L+ + + E + E + HV++AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERTAMADDLKGAWDQYSKEELHDKEAESHVTIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ +QFD K+ D+GDI+G+ G M +T GEL+
Sbjct: 71 RGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWKI-ADLGDIVGIDGVMFKTNTGELT 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +F +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ E F R+KI+ E+R
Sbjct: 130 VKAKTFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNKESTQTFIHRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ GGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIPGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+D+ +M++TE ++ H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF ++ +D +E A G+E I+ +
Sbjct: 310 IDLESSWTRLHIVDAVKEATGVDFYQVKSD----EEAKALAKEHGIE------IKENMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E A + EK+ + +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRERFE-----------AQLVEKA-------QGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|418635185|ref|ZP_13197569.1| lysine--tRNA ligase [Staphylococcus lugdunensis VCU139]
gi|374842134|gb|EHS05581.1| lysine--tRNA ligase [Staphylococcus lugdunensis VCU139]
Length = 495
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 347/514 (67%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++RT A+ L+ + + E + E + HV++AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERTAMADDLKGAWDQYSKEELHDKEAESHVTIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ +QFD K+ D+GDI+G+ G M +T GEL+
Sbjct: 71 RGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWKI-ADLGDIVGIDGVMFKTNTGELT 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +F +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ E F R+KI+ E+R
Sbjct: 130 VKAKTFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNKESTQTFIHRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ GGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIPGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+D+ +M++TE ++ H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYNGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF ++ +D +E A G+E I+ +
Sbjct: 310 IDLESSWTRLHIVDAVKEATGVDFYQVKSD----EEAIALAKEHGIE------IKENMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E A + EK+ + +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRERFE-----------AQLVEKA-------QGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|339444380|ref|YP_004710384.1| lysyl-tRNA synthetase class II [Eggerthella sp. YY7918]
gi|338904132|dbj|BAK43983.1| lysyl-tRNA synthetase class II [Eggerthella sp. YY7918]
Length = 649
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/513 (49%), Positives = 332/513 (64%), Gaps = 34/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K E L + G++PY + + +H +L E Y L +G S D V VAGR++A+R
Sbjct: 18 VRRAKREALIAAGIDPYGHGFKYSHHLAELAEKYASLEDG---ASTEDEVQVAGRIMAKR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+AFL LRD +G IQL+C L D + QLK +D+GD +GV+G+M RT++G+LSV
Sbjct: 75 DQGKIAFLELRDSTGDIQLFCRINTLGEDAYAQLKD-LDVGDWIGVTGTMMRTKRGQLSV 133
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF +L+KSL PLP+K+HGL D + RYRQRYVD++ PEV F KR KI++ IR+ +
Sbjct: 134 AVTSFELLSKSLRPLPEKFHGLADKETRYRQRYVDLVMNPEVKGTFEKRFKIIAAIRRYM 193
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E G+ EVETP+L GGA ARPF+T+HN+L +D YLRIATELHLKR+L+GGFEK++EI
Sbjct: 194 EEQGYYEVETPILHPILGGANARPFITHHNALDKDFYLRIATELHLKRLLVGGFEKVFEI 253
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+ HNPEFTT+E Y+A+SD + MM++T+ +V ALA G ++YQG ++
Sbjct: 254 GRQFRNEGMDPYHNPEFTTMEFYQAFSDLEGMMDLTQGVVQAAALAACGTTKVEYQGHQV 313
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR TM L G D V+ E T L + LE E + G
Sbjct: 314 DLGGTWRRATMIELASAGAGED---------VSFERTRDELVEILERNGGHA-EDAWGKG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L+ E+FE V E KL+QPTFV ++P+E+SPLAK LTERFELFICG E ANAF E
Sbjct: 364 KLIAEIFEAVAEEKLIQPTFVTEHPLEVSPLAKKKAGDENLTERFELFICGHEYANAFGE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R +QV E DD + + DDD+V ALEYGM
Sbjct: 424 LNDPVDQAERFRKQV------------------EAKDLGDDEA--MGYDDDYVRALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA G G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 PPAGGCGIGIDRLVMLLTDAPSIRDVLLFPHMR 496
>gi|258424447|ref|ZP_05687326.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
gi|257845316|gb|EEV69351.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
Length = 515
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 344/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 31 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 90
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 91 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 149
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 150 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 209
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 210 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 269
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 270 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 329
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 330 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 379
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 380 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 439
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ + +D ++E +D+D++ ALEYG
Sbjct: 440 ELNDPIDQKGRFEAQ-----------LVEKA-------QGNDEAHE--MDEDYIEALEYG 479
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 480 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 513
>gi|398816875|ref|ZP_10575515.1| lysyl-tRNA synthetase (class II) [Brevibacillus sp. BC25]
gi|398031821|gb|EJL25193.1| lysyl-tRNA synthetase (class II) [Brevibacillus sp. BC25]
Length = 511
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/517 (48%), Positives = 345/517 (66%), Gaps = 40/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G +P+ K+++TH A + + + + EE +E + V++AGR++A+R
Sbjct: 28 VRHDKMNQLREWGFDPFGKKFEQTHHAADITKAFSEKSK-EELEAEENVVTIAGRLMAKR 86
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERL---LSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
GK +F L D SG IQ+Y ++ + LS FD DIGD++GV+G + +T+ GE
Sbjct: 87 GMGKASFAQLLDRSGQIQIYVRQDTVGEELSKVFD----LADIGDMIGVTGVIFKTKTGE 142
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV LTKSL PLP+KYHGL D++ RYR+RYVD+I PEV D F R++I++ +R
Sbjct: 143 LSVKAKELSYLTKSLRPLPEKYHGLKDIETRYRKRYVDLIVNPEVRDTFITRSRILTSMR 202
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++LG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+
Sbjct: 203 RYLDNLGYLEVETPTLHAIAGGASARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKV 262
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR++RNEG+STRHNPEFT IE+YEAY+DYQ +M++TEE+V H A V G + I YQG
Sbjct: 263 YEIGRVYRNEGISTRHNPEFTMIELYEAYADYQDIMSLTEEMVAHIAQEVLGTMKIQYQG 322
Query: 362 VEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
EI L WRR M +L+KE G+DF E+ +D RAL + +E
Sbjct: 323 NEIDLTPKWRRVHMVDLIKENLGVDFWKEMSDD-------EARALA----KEHGVSVEPH 371
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+ G+++NE FE +E L+QPTFV +P+ ISPLAK + + T+RFELFI RE AN
Sbjct: 372 HTFGHVVNEFFEQKLEHTLIQPTFVYGHPVAISPLAKKNDQDPRFTDRFELFIVAREHAN 431
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E Q+ EK A +D +++ +DDDF+ AL
Sbjct: 432 AFTELNDPIDQRERFEAQLL---EKEAG---------------NDEAHD--MDDDFIEAL 471
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 472 EYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPHMR 508
>gi|357039787|ref|ZP_09101579.1| Lysyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357593|gb|EHG05366.1| Lysyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 503
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/540 (45%), Positives = 350/540 (64%), Gaps = 43/540 (7%)
Query: 40 VSAGTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYR 99
+S+ N+ + S + + D + +R+ K+ E + +GL PY K++RTH+A ++ + +
Sbjct: 1 MSSDKSNQDVNVSRSQSEDINELIRVRLAKLAEFKEQGLNPYGGKYERTHTAREILDNFE 60
Query: 100 HLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLK 159
E+ VS+AGRV+A+R GK F ++D +G IQ+Y + +D L
Sbjct: 61 GF--------ESRQVSLAGRVMAKRGHGKAGFANIQDSTGQIQIYARLNDIGEQAYD-LF 111
Query: 160 VFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVD 219
+DIGDI+GV+G + +T GE+++ V + +L+KSL PLP+K+HGL DV+ RYRQRYVD
Sbjct: 112 TKLDIGDIVGVTGKIFKTRMGEITLAVETLRLLSKSLRPLPEKWHGLKDVELRYRQRYVD 171
Query: 220 MISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRD 279
+I P+V + F KR++I+ IR ++ GF+EVETP++ AGGA ARPF+T+HN+L D
Sbjct: 172 LIVNPDVKEAFIKRSRIIQAIRGYLDQRGFLEVETPMMHSIAGGAAARPFITHHNTLDMD 231
Query: 280 LYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNI 339
L+LRIA EL+LKR+L+GGFE++YEI R FRNEG+ST+HNPEFT +E+Y+AY+DY MM++
Sbjct: 232 LFLRIAPELYLKRLLVGGFERVYEINRNFRNEGISTKHNPEFTMLELYQAYADYHDMMDL 291
Query: 340 TEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNEL--GNDLKVA 397
E+++ A V + Y V+I L +PW R M VK+ +G+DF L G++ A
Sbjct: 292 AEDLICTVAEQVLDTNVVRYGDVDISLAKPWARVPMLEAVKKYSGVDFESLSTGDEAYAA 351
Query: 398 KETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAK 457
+ +E S G +LN+VFE +VEP L+QPTF+ DYP++ISPLAK
Sbjct: 352 VQQL------------PVEVERGESWGAILNKVFEEMVEPNLMQPTFIYDYPLDISPLAK 399
Query: 458 PHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQ 517
LT RFELFI GREMANAFSEL DPLDQ+ R Q+
Sbjct: 400 KKEDRPDLTYRFELFIYGREMANAFSELNDPLDQKERFLSQL------------------ 441
Query: 518 EKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EK + DD ++ +D+D+V ALEYGMPPA G+G+GIDRLVMLLTN+ASIRDVI FP++K
Sbjct: 442 EKRRAGDDEAH--MMDEDYVNALEYGMPPAGGLGIGIDRLVMLLTNAASIRDVILFPLMK 499
>gi|226309769|ref|YP_002769663.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|226092717|dbj|BAH41159.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 506
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/517 (48%), Positives = 345/517 (66%), Gaps = 40/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G +P+ K+++TH A + + + + EE +E + V++AGR++A+R
Sbjct: 23 VRHDKMNQLREWGFDPFGKKFEQTHHAADITKAFSEKSK-EELEAEENVVTIAGRLMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERL---LSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
GK +F L D SG IQ+Y ++ + LS FD DIGD++GV+G + +T+ GE
Sbjct: 82 GMGKASFAQLLDRSGQIQIYVRQDTVGEELSKVFD----LADIGDMIGVTGVVFKTKTGE 137
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV LTKSL PLP+KYHGL D++ RYR+RYVD+I PEV D F R++I++ +R
Sbjct: 138 LSVKAKELSYLTKSLRPLPEKYHGLKDIETRYRKRYVDLIVNPEVRDTFITRSRILTSMR 197
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++LG++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+
Sbjct: 198 RYLDNLGYLEVETPTLHAIAGGASARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKV 257
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR++RNEG+STRHNPEFT IE+YEAY+DYQ +M++TEE+V H A V G + I YQG
Sbjct: 258 YEIGRVYRNEGISTRHNPEFTMIELYEAYADYQDIMSLTEEMVAHIAQEVLGTMKIQYQG 317
Query: 362 VEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
EI L WRR M +L+KE G+DF E+ +D RAL + +E
Sbjct: 318 NEIDLTPKWRRVHMVDLIKENLGVDFWKEMSDD-------EARALA----KEHGVSVEPH 366
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+ G+++NE FE +E L+QPTFV +P+ ISPLAK + + T+RFELFI RE AN
Sbjct: 367 HTFGHVVNEFFEQKLEHTLIQPTFVYGHPVAISPLAKKNDQDPRFTDRFELFIVAREHAN 426
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E Q+ EK A +D +++ +DDDF+ AL
Sbjct: 427 AFTELNDPIDQRERFEAQLL---EKEAG---------------NDEAHD--MDDDFIEAL 466
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 467 EYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPHMR 503
>gi|15923507|ref|NP_371041.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926194|ref|NP_373727.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
gi|57651394|ref|YP_185450.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|82750224|ref|YP_415965.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
gi|87161440|ref|YP_493205.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194278|ref|YP_499070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|156978845|ref|YP_001441104.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|221142291|ref|ZP_03566784.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315214|ref|ZP_04838427.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255005310|ref|ZP_05143911.2| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|262050002|ref|ZP_06022861.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
gi|262052543|ref|ZP_06024740.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|269202138|ref|YP_003281407.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|284023526|ref|ZP_06377924.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
gi|294850378|ref|ZP_06791111.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|295407408|ref|ZP_06817205.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|296276170|ref|ZP_06858677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
gi|297246488|ref|ZP_06930328.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|379013798|ref|YP_005290034.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VC40]
gi|384863845|ref|YP_005749204.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384869101|ref|YP_005751815.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
gi|385780782|ref|YP_005756953.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 11819-97]
gi|387142205|ref|YP_005730598.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
gi|387149677|ref|YP_005741241.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus 04-02981]
gi|387601871|ref|YP_005733392.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
gi|387779655|ref|YP_005754453.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus LGA251]
gi|415684072|ref|ZP_11449227.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
gi|415689630|ref|ZP_11452889.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
gi|415694318|ref|ZP_11455844.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
gi|417648754|ref|ZP_12298573.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
gi|417652231|ref|ZP_12301982.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
gi|417654413|ref|ZP_12304134.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
gi|417797759|ref|ZP_12444951.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
gi|417800566|ref|ZP_12447681.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
gi|417888511|ref|ZP_12532619.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
gi|417891610|ref|ZP_12535671.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
gi|417892292|ref|ZP_12536343.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
gi|417899034|ref|ZP_12542945.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
gi|417900638|ref|ZP_12544519.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
gi|417903842|ref|ZP_12547676.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
gi|418276816|ref|ZP_12891631.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
gi|418281817|ref|ZP_12894616.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
gi|418284543|ref|ZP_12897261.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
gi|418307968|ref|ZP_12919638.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
gi|418310684|ref|ZP_12922219.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
gi|418312103|ref|ZP_12923614.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
gi|418318418|ref|ZP_12929821.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
gi|418320544|ref|ZP_12931901.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus VCU006]
gi|418423686|ref|ZP_12996835.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS1]
gi|418426630|ref|ZP_12999658.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS2]
gi|418429556|ref|ZP_13002490.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418432451|ref|ZP_13005253.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS4]
gi|418436167|ref|ZP_13007985.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS5]
gi|418439062|ref|ZP_13010786.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS6]
gi|418442045|ref|ZP_13013664.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS7]
gi|418445173|ref|ZP_13016666.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS8]
gi|418448112|ref|ZP_13019520.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS9]
gi|418450938|ref|ZP_13022281.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS10]
gi|418453955|ref|ZP_13025229.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418456859|ref|ZP_13028075.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS11b]
gi|418561459|ref|ZP_13125949.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
gi|418565525|ref|ZP_13129925.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
gi|418567835|ref|ZP_13132198.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
gi|418571186|ref|ZP_13135429.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
gi|418573287|ref|ZP_13137486.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
gi|418580088|ref|ZP_13144177.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418596204|ref|ZP_13159778.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
gi|418599385|ref|ZP_13162870.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
gi|418601125|ref|ZP_13164568.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
gi|418638231|ref|ZP_13200533.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
gi|418642089|ref|ZP_13204289.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
gi|418644615|ref|ZP_13206756.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
gi|418648484|ref|ZP_13210527.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
gi|418653649|ref|ZP_13215585.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
gi|418658064|ref|ZP_13219809.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-111]
gi|418873754|ref|ZP_13428036.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-125]
gi|418874533|ref|ZP_13428800.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC93]
gi|418878780|ref|ZP_13433013.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880222|ref|ZP_13434443.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883149|ref|ZP_13437350.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1769]
gi|418888416|ref|ZP_13442554.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1524]
gi|418893974|ref|ZP_13448076.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1057]
gi|418902776|ref|ZP_13456818.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418907098|ref|ZP_13461118.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC345D]
gi|418911184|ref|ZP_13465168.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG547]
gi|418914952|ref|ZP_13468921.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418924741|ref|ZP_13478645.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418927830|ref|ZP_13481717.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418930543|ref|ZP_13484392.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1750]
gi|418946676|ref|ZP_13499091.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-157]
gi|418952832|ref|ZP_13504846.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-189]
gi|418990409|ref|ZP_13538071.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419774446|ref|ZP_14300413.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
gi|419785813|ref|ZP_14311559.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
gi|421150881|ref|ZP_15610533.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424784369|ref|ZP_18211180.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus CN79]
gi|440707777|ref|ZP_20888462.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
gi|440736514|ref|ZP_20916113.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443636465|ref|ZP_21120572.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
gi|443638638|ref|ZP_21122676.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
gi|54039675|sp|P67610.1|SYK_STAAN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|54042058|sp|P67609.1|SYK_STAAM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71153565|sp|Q5HIF7.1|SYK_STAAC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123098061|sp|Q2G0Q3.1|SYK_STAA8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123727449|sp|Q2YVW8.1|SYK_STAAB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123749646|sp|Q2FJC3.1|SYK_STAA3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166230591|sp|A7WYS8.1|SYK_STAA1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|13700407|dbj|BAB41705.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
gi|14246285|dbj|BAB56679.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
gi|57285580|gb|AAW37674.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|82655755|emb|CAI80154.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
gi|87127414|gb|ABD21928.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201836|gb|ABD29646.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|156720980|dbj|BAF77397.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|259159590|gb|EEW44637.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|259161937|gb|EEW46520.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
gi|262074428|gb|ACY10401.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|269940088|emb|CBI48464.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
gi|283469809|emb|CAQ49020.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
gi|285816216|gb|ADC36703.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus 04-02981]
gi|294822802|gb|EFG39238.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|294967765|gb|EFG43797.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|297176675|gb|EFH35937.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|312829012|emb|CBX33854.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128646|gb|EFT84649.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
gi|315193880|gb|EFU24274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
gi|315196201|gb|EFU26557.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
gi|329313236|gb|AEB87649.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
gi|329725054|gb|EGG61549.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
gi|329729791|gb|EGG66188.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
gi|329731092|gb|EGG67464.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
gi|334266230|gb|EGL84713.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
gi|334277838|gb|EGL96055.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
gi|341846772|gb|EGS87962.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
gi|341847470|gb|EGS88650.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
gi|341848890|gb|EGS90046.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
gi|341851837|gb|EGS92744.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
gi|341855006|gb|EGS95864.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
gi|341857913|gb|EGS98720.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
gi|344176757|emb|CCC87219.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus LGA251]
gi|364521771|gb|AEW64521.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 11819-97]
gi|365172197|gb|EHM62925.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
gi|365173203|gb|EHM63787.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
gi|365173994|gb|EHM64395.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
gi|365227035|gb|EHM68242.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus VCU006]
gi|365236205|gb|EHM77105.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
gi|365238778|gb|EHM79607.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
gi|365242684|gb|EHM83385.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
gi|365243035|gb|EHM83727.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
gi|371973177|gb|EHO90536.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
gi|371977537|gb|EHO94804.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
gi|371981205|gb|EHO98390.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
gi|371981506|gb|EHO98680.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
gi|371982610|gb|EHO99760.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
gi|374362495|gb|AEZ36600.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VC40]
gi|374396914|gb|EHQ68133.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
gi|374398649|gb|EHQ69810.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
gi|374399870|gb|EHQ71003.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
gi|375017620|gb|EHS11228.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
gi|375018497|gb|EHS12075.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
gi|375022934|gb|EHS16401.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
gi|375025134|gb|EHS18542.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
gi|375026109|gb|EHS19497.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
gi|375039369|gb|EHS32299.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-111]
gi|375365894|gb|EHS69919.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-125]
gi|375376192|gb|EHS79737.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-189]
gi|375377604|gb|EHS81057.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-157]
gi|377693058|gb|EHT17434.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377693286|gb|EHT17659.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377700089|gb|EHT24434.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377716801|gb|EHT40982.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377716880|gb|EHT41059.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377723838|gb|EHT47960.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377725375|gb|EHT49489.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG547]
gi|377733067|gb|EHT57114.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377739158|gb|EHT63165.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377743413|gb|EHT67395.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377747043|gb|EHT71011.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377755260|gb|EHT79163.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1524]
gi|377755304|gb|EHT79205.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761330|gb|EHT85204.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377772280|gb|EHT96031.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC93]
gi|383361978|gb|EID39339.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
gi|383971722|gb|EID87787.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
gi|387721191|gb|EIK09072.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387721230|gb|EIK09110.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS2]
gi|387722622|gb|EIK10411.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS1]
gi|387727675|gb|EIK15182.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS4]
gi|387729614|gb|EIK17045.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS5]
gi|387731710|gb|EIK18976.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS6]
gi|387738580|gb|EIK25616.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS8]
gi|387739777|gb|EIK26765.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS9]
gi|387740036|gb|EIK27009.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS7]
gi|387747077|gb|EIK33792.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS10]
gi|387748414|gb|EIK35097.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387749241|gb|EIK35881.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS11b]
gi|394329101|gb|EJE55224.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|421957287|gb|EKU09610.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus CN79]
gi|436429614|gb|ELP26980.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505631|gb|ELP41519.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
gi|443407641|gb|ELS66186.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
gi|443408959|gb|ELS67467.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
Length = 495
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|297207380|ref|ZP_06923819.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300910339|ref|ZP_07127792.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
gi|296887943|gb|EFH26837.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300888328|gb|EFK83515.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
Length = 515
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 343/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 31 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 90
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 91 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 149
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 150 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 209
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 210 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 269
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 270 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 329
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D E A G+E KD +
Sbjct: 330 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----DEAKALAKEHGIEIKD------TMKY 379
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 380 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 439
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ + +D ++E +D+D++ ALEYG
Sbjct: 440 ELNDPIDQKGRFEAQ-----------LVEKA-------QGNDEAHE--MDEDYIEALEYG 479
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 480 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 513
>gi|384546797|ref|YP_005736050.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
gi|298693848|gb|ADI97070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
Length = 495
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEDWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|417896658|ref|ZP_12540603.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
gi|341840498|gb|EGS82002.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
Length = 495
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGIMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|386712433|ref|YP_006178755.1| lysyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
gi|384071988|emb|CCG43478.1| lysyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
Length = 498
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ R +GL+P+ K++RTH A L E Y N EE + ++AGR++ +R
Sbjct: 14 VRRDKLNTYREQGLDPFGDKFERTHLAEDLIEKYDQY-NKEELEEKQFPATIAGRIMTKR 72
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG IQLY K+R+ + ++ D+GDI+GV+G M +T+ GELSV
Sbjct: 73 GKGKAGFTHIQDVSGQIQLYIRKDRIGEEAYEVFNT-ADLGDIIGVTGVMFKTKVGELSV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +LTK+L PLP+K+HGL DV++RYRQRY+D+I+ P D F R+KI+ +R+ +
Sbjct: 132 KADEFHLLTKALRPLPEKFHGLQDVEQRYRQRYLDLITNPGSRDTFITRSKIIQSMRRYL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETP++ G GGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 192 DGLGFLEVETPLMHGIPGGASARPFVTHHNALDMQLYMRIAIELHLKRLIVGGMEKVYEI 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+DY +M++TE +V H A V G + Y EI
Sbjct: 252 GRVFRNEGVSTRHNPEFTMLELYEAYADYHDVMSLTENMVAHIAKEVLGSAKVTYNEQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE TG+DF E +D + AKE L + I+ S + G
Sbjct: 312 NLEPEWTRLHMVDAIKEYTGVDFFEDMSDDQ-AKE---------LAKEHNVEIQDSMTFG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAFSE
Sbjct: 362 HIVNEFFEQYVEDKLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFSE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DF+ +LEYG+
Sbjct: 422 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFLESLEYGL 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 462 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPQMR 494
>gi|417643161|ref|ZP_12293222.1| lysine--tRNA ligase [Staphylococcus warneri VCU121]
gi|445060506|ref|YP_007385910.1| lysyl-tRNA ligase [Staphylococcus warneri SG1]
gi|330686072|gb|EGG97694.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU121]
gi|443426563|gb|AGC91466.1| lysyl-tRNA ligase [Staphylococcus warneri SG1]
Length = 495
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/514 (47%), Positives = 344/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH-VSVAGRVVAR 123
+R +K++ELR G++P+ ++DR+ SA +L+ + + E E + V++AGR++ +
Sbjct: 11 VRRQKLQELRDLGIDPFGQRYDRSASAAELKAAWDEFSKEELHEKEEESHVAIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ +QFD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQIGEEQFDLWK-HADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNQKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVLGSAKVQYNGTE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R + + VKEATG+DF + +D +E A G+E I +
Sbjct: 310 IDLESSWKRLHIVDAVKEATGVDFYNVKSD----EEAKALAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PI+ISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIDISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q+ + ++ +D ++E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKERFEAQLVEK------------------EQGNDEAHE--MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|418559589|ref|ZP_13124127.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
gi|418993229|ref|ZP_13540869.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG290]
gi|371974609|gb|EHO91929.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
gi|377747289|gb|EHT71254.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG290]
Length = 495
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEVDSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|448745388|ref|ZP_21727228.1| lysyl-tRNA synthetase [Staphylococcus aureus KT/Y21]
gi|445561296|gb|ELY17515.1| lysyl-tRNA synthetase [Staphylococcus aureus KT/Y21]
Length = 495
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLEFAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|224475661|ref|YP_002633267.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222420268|emb|CAL27082.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 497
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/516 (47%), Positives = 347/516 (67%), Gaps = 34/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND---HVSVAGRVV 121
+R +K++EL G++P+ ++DRT SA +L+E + + E E++ HV++AGR++
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFDRTASAEELKEEWDQYSKEELHEKEDEEAAHVAIAGRLM 70
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
+R GK F ++D SG IQ+Y K+++ +QF K+ D+GDI+G+ G M +T GE
Sbjct: 71 TKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFAIWKM-ADLGDIVGIEGVMFKTNTGE 129
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV SF +L+KSL PLPDK+HGL DV++RYRQRY+D+I+ E F R+KI+ E+R
Sbjct: 130 LSVKAKSFTLLSKSLRPLPDKFHGLQDVEQRYRQRYLDLITNQESTQTFINRSKIIQEMR 189
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ S GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+
Sbjct: 190 NYLNSKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKV 249
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR+FRNEG+STRHNPEFT IE+YEAY+D+ +M++TE + H + V G + Y
Sbjct: 250 YEIGRVFRNEGVSTRHNPEFTMIELYEAYADFHDIMDLTEGTIRHISKKVLGTAVVPYGE 309
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
E+ L+ PW+R + + VKEATG++F D+K +E A G+E D
Sbjct: 310 YEVDLDSPWKRVHIVDAVKEATGVNF----FDVKSDEEARELAKEHGIEITDHM------ 359
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++LNE FE VE L+QPTFV +PIEISPLAK + T+RFELFI GRE ANA
Sbjct: 360 TYGHILNEFFEQKVEETLIQPTFVYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANA 419
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E Q+++ ++ +D ++E +D+D++ ALE
Sbjct: 420 FTELNDPIDQRERFEAQLKEK------------------EQGNDEAHE--MDEDYIEALE 459
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 YGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMR 495
>gi|21282201|ref|NP_645289.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49485381|ref|YP_042602.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
gi|418316069|ref|ZP_12927515.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
gi|418934814|ref|ZP_13488634.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418988909|ref|ZP_13536579.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1835]
gi|448741255|ref|ZP_21723223.1| lysine--tRNA ligase [Staphylococcus aureus KT/314250]
gi|38258393|sp|Q8NXZ0.1|SYK_STAAW RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|56749397|sp|Q6GBX1.1|SYK_STAAS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|21203637|dbj|BAB94337.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49243824|emb|CAG42249.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
gi|365242039|gb|EHM82767.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
gi|377716803|gb|EHT40983.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377769811|gb|EHT93578.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC128]
gi|445548047|gb|ELY16305.1| lysine--tRNA ligase [Staphylococcus aureus KT/314250]
Length = 495
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----DEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|384549381|ref|YP_005738633.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302332230|gb|ADL22423.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 495
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEYGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|335038438|ref|ZP_08531685.1| Lysyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
gi|334181665|gb|EGL84183.1| Lysyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
Length = 494
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 347/515 (67%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R KK++ LR KG++P+ ++++ + + + Y H+ EE + + V +AGR++ +R
Sbjct: 11 VRRKKMQALREKGIDPFGQRFEQRDYSQDILDRYDHIPK-EELDPQEHEVQIAGRIMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y +++ + F+ K D+GDI+GV G++ +T++GE +V
Sbjct: 70 EQGKAGFAHIQDMKGRIQIYVRLDKVGEEAFELFKQ-ADLGDIVGVHGTVFKTKRGETTV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+FV+LTKSL PLPDKYHGL DV++RYR+RYVD+I PEV F R++I+ IR +
Sbjct: 129 KAKTFVLLTKSLRPLPDKYHGLKDVEQRYRKRYVDLIINPEVKQTFVTRSRIIRAIRNYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETP L AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG EK+YEI
Sbjct: 189 DKLGFLEVETPTLHTIAGGAAARPFITHHNALDMELYLRIALELHLKRLIVGGIEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT +E+Y+AY+D++ +M +TE+++ H AL V G TI Y EI
Sbjct: 249 GRVYRNEGISTRHNPEFTMLELYQAYADFEDIMELTEKLIEHVALEVLGTTTITYGEHEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSPS 422
L PW+R +M +KE GIDF++ +D + RAL G+E IE +
Sbjct: 309 NLATPWKRISMVEAIKETVGIDFSQQMSDEQA------RALAKEHGVE------IEPHMT 356
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++NE FE VE L+QPTFV +P+ ISPLAK +++ T+RFEL+I GRE ANAF
Sbjct: 357 FGHIVNEFFEQKVEHTLIQPTFVYGHPLAISPLAKKNKQDPRFTDRFELYIVGREHANAF 416
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E A ++E+ E + HS +D+DF+ ALEY
Sbjct: 417 TELNDPIDQRERFE-----------AQLAEREQGNE-----EAHS----MDEDFIEALEY 456
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 457 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMR 491
>gi|269792728|ref|YP_003317632.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100363|gb|ACZ19350.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 505
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/513 (49%), Positives = 344/513 (67%), Gaps = 34/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K+ LR +G +P++ K+DR HS ++E Y HLA +E + +SVAGR++ R
Sbjct: 23 RKEKLFRLREEGYDPFSIDKFDRQHSVGYVRERYDHLAPDQEGE---ELLSVAGRIMTLR 79
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F TL +DSG IQLY + ++L + + K +VD GDILGV+G RT++GELS+
Sbjct: 80 RHGKASFATLEEDSGRIQLYFQLDQLGEESYGFFKKWVDTGDILGVNGRAFRTQRGELSI 139
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +LTK+L PLP+K+HGL D + RYRQRY+D++ PEV + FRKR +I+ +R+ +
Sbjct: 140 KVTEFKLLTKALRPLPEKWHGLKDQEVRYRQRYLDLMVNPEVRETFRKRTRIIQTVRRVM 199
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
ES G +EV TP+L AGGA ARPFVT+HN+LG +YLRIATEL+LKR+++G F+++YEI
Sbjct: 200 ESHGTLEVTTPILSTLAGGANARPFVTFHNALGIPMYLRIATELYLKRLVVGMFDRVYEI 259
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G FRNEG+ +HNPEFT +E+Y AY++ + MMN+ EEI+ CA AV G T YQG EI
Sbjct: 260 GPNFRNEGIDLKHNPEFTAMEVYWAYANNEDMMNLCEEILVACADAV-GSRTFTYQGREI 318
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
C E P+RR TM +LV+E TGIDF + ++ A LE K ++ +
Sbjct: 319 CFEPPFRRATMMDLVREHTGIDFEIISDE---------EARRIALERKVVEELKGYETRY 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LL E F+ VE KL+QPTFV+ +P ISPLAK + + +T+RFELF+ G E+ANAFSE
Sbjct: 370 HLLPEFFDAYVEDKLIQPTFVIGHPTVISPLAKRNPDNPDITDRFELFVNGSELANAFSE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQR R EQVRQ KE+ D V D+DF+ ALEYG+
Sbjct: 430 LNDPLDQRERFLEQVRQ-------------------KEAGDDEAHV-FDEDFINALEYGL 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP GMG+GIDRLVMLLT+S SIRDVI FP +K
Sbjct: 470 PPTGGMGIGIDRLVMLLTDSKSIRDVILFPTMK 502
>gi|339006583|ref|ZP_08639158.1| lysyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|338775792|gb|EGP35320.1| lysyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
Length = 508
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+++LR G++P+ K+++ A+ + + EE N V++AGR++A+R
Sbjct: 23 VRHDKMDQLREWGIDPFGKKFEQKDFASDITASFTD-KTKEELEEANHEVTIAGRLMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F L D SG IQ+Y K+ + D ++ + DIGDI+G++G++ +T+ GELSV
Sbjct: 82 KMGKASFAQLLDRSGQIQIYVRKDTVGDDLYNVFDL-SDIGDIIGLTGTLFKTKTGELSV 140
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S V L+KSL PLP+K+HGL D++ RYR+RYVD+I PEV F R++I++E+R+ +
Sbjct: 141 KAKSLVFLSKSLRPLPEKFHGLKDIETRYRKRYVDLIVNPEVRKTFIARSRILTEMRRYL 200
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++LG++EVETP L AGGA ARPF+T+HN+L L++RIA ELHLKR+++GG EK+YEI
Sbjct: 201 DNLGYLEVETPTLHSIAGGASARPFITHHNALDMQLFMRIAIELHLKRLIVGGMEKVYEI 260
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TEE++ H A V G I YQG E+
Sbjct: 261 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMKLTEEMIAHIAQTVLGTTKIQYQGHEV 320
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M +LVKE TG+DF K + RAL + + +E+ + G
Sbjct: 321 DLTPQWRRVHMVDLVKEHTGVDF------WKHMSDEEARALA----KEHEITVEAHHTFG 370
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTFV +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 371 HVVNEFFEQKIEETLIQPTFVYGHPVEISPLAKKNEEDPRFTDRFELFIVAREHANAFTE 430
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q + EK++ ++ E +DDDF+ ALEYGM
Sbjct: 431 LNDPIDQRQRFEAQ-----------LLEKAAGNDEAHE---------MDDDFIEALEYGM 470
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 471 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|222528674|ref|YP_002572556.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455521|gb|ACM59783.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 497
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/516 (48%), Positives = 344/516 (66%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK++EL+ PY K+D TH + ++E + E V VAGR++++R
Sbjct: 20 RIKKLKELQKNKYNPYEKVKYDPTHYSTDIKENFEVF--------EGKFVCVAGRMLSKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++++ K + DIGDI+GV G + +T KGE+SV
Sbjct: 72 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL DVD RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 132 KAKEIEMLTKCLRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 192 DDRGFLEVETPVLSPVAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MM++TE+++T A V G L I YQG EI
Sbjct: 252 GRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMDLTEKLITTVAQEVLGTLKITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM +K+ G+DF L K+AK+ G+E +E +
Sbjct: 312 DLTAPWQRLTMVEAIKKYVGVDFENVTSLDEARKIAKDL-------GIE------VEENW 358
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+G+++NE+FE VE LVQPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 359 QIGHIINEIFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 418
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 419 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 458
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494
>gi|386830160|ref|YP_006236814.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|417798437|ref|ZP_12445604.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
gi|418657221|ref|ZP_13218997.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-105]
gi|334275956|gb|EGL94229.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
gi|375031224|gb|EHS24511.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-105]
gi|385195552|emb|CCG15161.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 495
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHITNEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|354559270|ref|ZP_08978520.1| Lysyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353542859|gb|EHC12319.1| Lysyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 488
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/516 (46%), Positives = 348/516 (67%), Gaps = 45/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+E LR +G EPYA ++ RTH A ++ + + L E+ VAGR++++R
Sbjct: 10 IRLDKLEALRQQGSEPYADRYQRTHMAQEILDQFSEL--------EDQEAKVAGRIMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F + D SG IQ+Y K+ + +D F+ + F D+GDI+GV G + RT++GE+S+
Sbjct: 62 DQGKVIFAHIEDFSGRIQIYIRKDEVGADWFEMISKF-DVGDIIGVKGKVFRTKRGEISL 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
IL+K++ LP+K+HGLT+V+ RYRQRY+D+I PEV +VF R+KI+ +R+ +
Sbjct: 121 HAEEVQILSKAMRALPEKFHGLTNVELRYRQRYLDLIMNPEVKNVFVMRSKIIRAMREYL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GGF++++EI
Sbjct: 181 EGKGFLEVETPTLHTIPGGAAARPFITHHNALDIDLYLRIALELPLKRLIVGGFDRVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+A+++Y+ +M +TE ++++ A V+GKL I+YQG +
Sbjct: 241 GRNFRNEGISIKHNPEFTMMELYQAFANYEDIMELTENMISYIAQKVHGKLEIEYQGETL 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
PWRR M + E +G+DF ++ D KVA+E + +E +
Sbjct: 301 NFATPWRRLPMLEGILEYSGVDFRQILTDEEARKVAQEKGIH-------------VEGTA 347
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G ++NE FE VE KL+QPTF+ +P+EISPLAK ++ H T+RFE+F+ GRE+ NA
Sbjct: 348 SRGKIINEFFEEFVESKLIQPTFITGHPVEISPLAKRNKEHPEYTDRFEVFVFGRELGNA 407
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E Q V+E+++ DD ++ +D+DFV ALE
Sbjct: 408 FSELNDPIDQRQRFEAQ-----------VAERANG-------DDEAH--MMDEDFVQALE 447
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDRLVMLLTNSASIRDVI FP +K
Sbjct: 448 YGLPPTGGLGIGIDRLVMLLTNSASIRDVILFPTMK 483
>gi|392407822|ref|YP_006444430.1| lysyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620958|gb|AFM22105.1| lysyl-tRNA synthetase (class II) [Anaerobaculum mobile DSM 13181]
Length = 506
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/529 (47%), Positives = 353/529 (66%), Gaps = 40/529 (7%)
Query: 56 TSDREAVRALRIKKVEELRSKG-LEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDH 113
T+ ++ R++K+E LRS+ +PY +WD+ H + + E + HL G + +
Sbjct: 14 TTPEMEIKRQRMEKLERLRSEAKFDPYVIDRWDKKHKLSFVHEHFSHL--GPDELDKEAT 71
Query: 114 VSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGS 173
+ AGRV++ R GK +F+ L DDSG +QLY + L D+++ K +VD GD LG+ G
Sbjct: 72 IRTAGRVMSIRKHGKASFVHLEDDSGRLQLYFSFDSLGEDKYEWFKKWVDTGDFLGIEGY 131
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
RT++GELS+LV F +L+K+L PLP+K+HGL D + RYRQRY+DMI+ PEV +VFRKR
Sbjct: 132 PFRTKRGELSLLVTEFKLLSKALRPLPEKWHGLKDTEVRYRQRYLDMIANPEVREVFRKR 191
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
AKI+ R+ +ES G +EVETP+L AGGA A+PF+TYHN+LG +LYLRIATEL+LKR+
Sbjct: 192 AKIIKTFREVLESHGTLEVETPILSPIAGGANAKPFITYHNALGINLYLRIATELYLKRL 251
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++G +E++YEIG+ FRNEG+ + HNPEFT +E+Y AY++Y+ MMN+TEEI+ CA A+ G
Sbjct: 252 IVGMYERVYEIGKNFRNEGIDSMHNPEFTAMEVYWAYANYEDMMNLTEEIIVACADAMGG 311
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDGLEN 411
+ + Y I E P+RR TM +LVKE GIDF + ++ ++AKE L G N
Sbjct: 312 R-QLPYGEHIINYEPPFRRATMVDLVKEHCGIDFLSITDEDARRLAKEKGLDIKG----N 366
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ + +I + E F+ VE KL+QPTFVL YP+EISPLAK + T RFEL
Sbjct: 367 ESRLLI---------MTEFFDNFVEEKLIQPTFVLGYPVEISPLAKRDPDNPDFTRRFEL 417
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FICG E+ANAFSEL DPLDQR R +Q+ K+ A E++ A
Sbjct: 418 FICGAEVANAFSELNDPLDQRERFLDQL-----KKKEAGDEEAHA--------------- 457
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
D+DF+TALE+G+PP G+G+GIDRL M LTNS+SIRDVI FP ++ ++
Sbjct: 458 FDEDFITALEHGLPPTGGLGIGIDRLTMFLTNSSSIRDVILFPTMRPKE 506
>gi|374321428|ref|YP_005074557.1| lysyl-tRNA synthetase [Paenibacillus terrae HPL-003]
gi|357200437|gb|AET58334.1| lysyl-tRNA synthetase [Paenibacillus terrae HPL-003]
Length = 508
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 342/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELRS G++P+ K+ RT A L Y L EE +N +S+AGR++A+R
Sbjct: 23 IRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTK-EELEEKNIEISIAGRIMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + ++ + +D+GDI+G+ G + +T+ GE ++
Sbjct: 82 VMGKASFAHVQDLSGRIQIYVRQDTVPEAKYKAFGI-LDLGDIVGIKGVLFKTKTGETTI 140
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV F R++I+ +R+ +
Sbjct: 141 KVLDLEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYL 200
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA A+PF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 201 DSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 260
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DYQ +M +TE +V H A V G I YQG E+
Sbjct: 261 GRVYRNEGISTRHNPEFTMIELYEAYADYQDIMQLTENMVAHIAQEVLGTQRIHYQGQEV 320
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE TG+DF ++++ E R L + K +E + G
Sbjct: 321 DLTPQWRRVSMVDAVKEVTGVDFG-----VQLSNEEAHR-----LAKEHKVPVEPHMTFG 370
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTF+ +P+EISPLAK + + T+RFELF+ RE ANAF+E
Sbjct: 371 HILNAFFEQFVEETLIQPTFITGHPVEISPLAKRNEQDPRFTDRFELFVVAREHANAFTE 430
Query: 485 LTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
L DP+DQR R E Q+ R+H +D ++E +DDDF+ ALEY
Sbjct: 431 LNDPIDQRQRFEAQLLEREH--------------------GNDEAHE--MDDDFIRALEY 468
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 469 GMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|379020287|ref|YP_005296949.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M013]
gi|418951412|ref|ZP_13503509.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-160]
gi|359829596|gb|AEV77574.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus subsp.
aureus M013]
gi|375373059|gb|EHS76764.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-160]
Length = 495
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ ++FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDNEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|312793712|ref|YP_004026635.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180852|gb|ADQ41022.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 497
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/516 (48%), Positives = 343/516 (66%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK++EL+ PY K+D TH + ++E + E V VAGR++++R
Sbjct: 20 RIKKLKELQQNKYNPYEKVKYDPTHYSTDIKENFEVF--------EGKFVCVAGRMLSKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++++ K + DIGDI+GV G + +T KGE+SV
Sbjct: 72 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL DVD RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 132 KAKEIEMLTKCLRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 192 DDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MM +TE+++T A V G L I YQG EI
Sbjct: 252 GRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMELTEKLITTVAQEVLGTLKITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM +K+ G+DF L K+AK+ G+E +E +
Sbjct: 312 DLTPPWQRLTMVEAIKKYVGVDFENVTSLDEARKIAKDL-------GIE------VEENW 358
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NEVFE VE LVQPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 359 QVGHIINEVFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 418
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 419 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 458
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494
>gi|421874234|ref|ZP_16305841.1| lysyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|372456889|emb|CCF15390.1| lysyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 508
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+++LR G++P+ K+++ A+ + + EE N V++AGR++A+R
Sbjct: 23 VRHDKMDQLREWGIDPFGKKFEQKDFASDITASFTD-KTKEELEEANHEVTIAGRLMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F L D SG IQ+Y K+ + D ++ + DIGDI+G++G++ +T+ GELSV
Sbjct: 82 KMGKASFAQLLDRSGQIQIYVRKDTVGDDLYNVFDL-SDIGDIIGLTGTLFKTKTGELSV 140
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S V L+KSL PLP+K+HGL D++ RYR+RYVD+I PEV F R++I++E+R+ +
Sbjct: 141 KAKSLVFLSKSLRPLPEKFHGLKDIETRYRKRYVDLIVNPEVRKTFIARSRILTEMRRYL 200
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++LG++EVETP L AGGA ARPF+T+HN+L L++RIA ELHLKR+++GG EK+YEI
Sbjct: 201 DNLGYLEVETPTLHSIAGGASARPFITHHNALDMQLFMRIAIELHLKRLIVGGMEKVYEI 260
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TEE++ H A V G I YQG E+
Sbjct: 261 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMKLTEEMIAHIAQTVLGTTKIQYQGHEV 320
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M +LVKE TG+DF K + RAL + +E+ + G
Sbjct: 321 DLTPQWRRVHMVDLVKEHTGVDF------WKHMSDEEARALA----KEHGITVEAHHTFG 370
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTFV +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 371 HVVNEFFEQKIEETLIQPTFVYGHPVEISPLAKKNEEDPRFTDRFELFIVAREHANAFTE 430
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q + EK++ ++ E +DDDF+ ALEYGM
Sbjct: 431 LNDPIDQRQRFEAQ-----------LLEKAAGNDEAHE---------MDDDFIEALEYGM 470
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 471 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|222152138|ref|YP_002561298.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
gi|222121267|dbj|BAH18602.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
Length = 495
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+++L G++P+ K++RT ++ L+E + + E + E + HV++AGR++ +
Sbjct: 11 VRRQKMQDLLDLGIDPFGQKFERTATSKSLKEDWDAFSKEELHDKEAESHVAIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+ + +QFD L D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVKDLEGQIQIYVRKDAVGDEQFD-LWNSADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L K+L PLPDK+HGL D+++RYRQRY+D+I+ E F R+KI+ E+R
Sbjct: 130 VKATSFTMLAKALRPLPDKFHGLQDIEQRYRQRYLDLITSDESTQTFITRSKIIQEMRSY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNAKGFLEVETPMMHTIAGGAAARPFVTHHNALDMELYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TEE+V + A V G T+ Y G E
Sbjct: 250 IGRVFRNEGISTRHNPEFTMIELYEAYADYNDIMDLTEEMVAYIAEKVTGSTTVTYDGEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L WRR M + VKE TG+DF + D +E A G+E ++ +
Sbjct: 310 IQLAPKWRRWHMVDAVKEFTGVDFYNVNTD----EEAHTLAKEHGVE------VKPNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE LVQPTF+ +P+E+SPLAK + T+RFELFI RE ANAF+
Sbjct: 360 GHVLNEFFEQKVEEHLVQPTFIYGHPVEVSPLAKQNPEDKRFTDRFELFIVRREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R A + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKQRF-----------LAQMEEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+SASIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSASIRDVLLFPYMR 493
>gi|52078577|ref|YP_077368.1| lysyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404487446|ref|YP_006711552.1| lysyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52001788|gb|AAU21730.1| lysyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346440|gb|AAU39074.1| lysyl-tRNA ligase LysS [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 499
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 340/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G +P+ ++DRTH + L E Y + EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRESGKDPFGQRFDRTHQSTDLIESYNEFSK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + +Q++ K D+GDI+GV+G M +T GELSV
Sbjct: 76 GKGKAGFAHIQDLKGQIQIYVRKDSVGEEQYEWFKS-SDLGDIVGVTGVMFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL D+++RYRQRY+D+I PE + F R+KI+ +R+ +
Sbjct: 135 KATSFDLLTKALRPLPDKYHGLKDIEQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHAIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G T+ Y E+
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQYGDYEV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF ++ V +E A G+E I SVG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WKEVSV-EEARAYAKEHGIE------ISEGMSVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKVEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQKERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 497
>gi|319648606|ref|ZP_08002820.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|423680475|ref|ZP_17655314.1| lysyl-tRNA synthetase [Bacillus licheniformis WX-02]
gi|317389373|gb|EFV70186.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|383441581|gb|EID49290.1| lysyl-tRNA synthetase [Bacillus licheniformis WX-02]
Length = 500
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 340/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G +P+ ++DRTH + L E Y + EE + V++AGR++ +R
Sbjct: 18 VRRDKMNQLRESGKDPFGQRFDRTHQSTDLIESYNEFSK-EELEEKAIEVTIAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + +Q++ K D+GDI+GV+G M +T GELSV
Sbjct: 77 GKGKAGFAHIQDLKGQIQIYVRKDSVGEEQYEWFKS-SDLGDIVGVTGVMFKTNVGELSV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL D+++RYRQRY+D+I PE + F R+KI+ +R+ +
Sbjct: 136 KATSFDLLTKALRPLPDKYHGLKDIEQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 196 DDHGYLEVETPTMHAIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G T+ Y E+
Sbjct: 256 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQYGDYEV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF ++ V +E A G+E I SVG
Sbjct: 316 DLKPEWKRLHMVDAVKEATGVDF---WKEVSV-EEARAYAKEHGIE------ISEGMSVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 366 HIINEFFEQKVEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 426 LNDPIDQKERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 498
>gi|172056108|ref|YP_001812568.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
gi|171988629|gb|ACB59551.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
Length = 497
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/516 (48%), Positives = 347/516 (67%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ +R +GL+P+ +++RT ++ Y E + + D VS+AGRV+ R
Sbjct: 13 VRLGKMNAMREQGLDPFGARFERTTDTTSIRAAYGEHEKEELAELKPD-VSIAGRVMTTR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +G IQLY K+ + + ++ K D+GDI+G+SG + +T GELSV
Sbjct: 72 RKGKVGFTNVQDVNGQIQLYVRKDDVGEEAYEIYKT-CDLGDIVGISGYVFKTNVGELSV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I+ E + F R+K++ IR+ +
Sbjct: 131 HVTSFTLLTKALRPLPDKYHGLKDVEQRYRQRYLDLITNTESRETFIARSKVIRGIRQYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP+L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DSLGYLEVETPMLHTIAGGASARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +MN+TE ++ H A V G + Y I
Sbjct: 251 GRVFRNEGISTRHNPEFTMIELYEAYADYNDIMNLTENLIAHVAQEVLGTTQVTYGEDVI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M +LVKEATG+DF E +++KE RA L ++ +++ + G
Sbjct: 311 DLSVGWKRAHMADLVKEATGVDFFE-----EISKE---RA--HELAHEHGVEVQAHMTTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE +E LVQPTFV +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 361 HILNEFFEQKIEESLVQPTFVYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ EK A +D ++E +D+DF+ ALEYGM
Sbjct: 421 LNDPIDQRERFEAQLV---EKEAG---------------NDEAHE--MDNDFIEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ QQ
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMRHQQ 496
>gi|317126822|ref|YP_004093104.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315471770|gb|ADU28373.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 499
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/515 (47%), Positives = 350/515 (67%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++++ G++P+ +++RTHSA L+E+Y + E + V++AGRV+ +R
Sbjct: 13 VRREKLKDMLDLGIDPFGQRFERTHSAQDLKELYEEESKEELEEKAIE-VTLAGRVMTKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK F ++D +G IQLY K+++ DQ+D +F +DIGD++GV+G + +T+ GEL
Sbjct: 72 GKGKAGFAHIQDLTGQIQLYVRKDQVGEDQYD---IFNRIDIGDLVGVTGEVFKTKVGEL 128
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ V F ILTK+L PLPDKYHGL DV++RYRQRYVD+I PEV + F R+KI+ +R+
Sbjct: 129 SIKVKDFQILTKALRPLPDKYHGLKDVEQRYRQRYVDLIVNPEVRETFILRSKILQSMRR 188
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ G++EVETP + AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+Y
Sbjct: 189 YLDNQGYLEVETPTMHAIAGGASARPFVTHHNALDMTLYMRIAIELHLKRLIVGGLEKVY 248
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE ++ H A V G T++Y GV
Sbjct: 249 EIGRVFRNEGISTRHNPEFTMIELYEAYADYNDIMELTENLIAHIAEEVLGTTTVNYNGV 308
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
++ L+ W+R M + +KE TG+DF E D + RAL + ++ +
Sbjct: 309 DVDLKPRWKRVHMVDAIKEYTGVDFWEEMTDEEA------RALA----KEHNVPVKDTMK 358
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++NE FE VE KLVQPTF+ +P++ISPLAK + T+RFELFI RE ANAF
Sbjct: 359 YGHVVNEFFETFVEEKLVQPTFIYGHPVDISPLAKKNADDERFTDRFELFIVAREHANAF 418
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E Q+ + ++ DD ++ +D+DFV ALEY
Sbjct: 419 TELNDPIDQRERFEAQLVER------------------EQGDDEAH--MMDEDFVEALEY 458
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 459 GMPPTGGLGIGIDRLVMLLTNSQSIRDVLLFPQMR 493
>gi|383787094|ref|YP_005471663.1| lysyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
gi|383109941|gb|AFG35544.1| lysyl-tRNA synthetase (class II) [Fervidobacterium pennivorans DSM
9078]
Length = 505
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 346/515 (67%), Gaps = 38/515 (7%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
R RI+++EELR G+ PY Y + +TH+ +++ + HLANGE ++ VS AGR+++
Sbjct: 6 REQRIREIEELRKMGINPYPYSYPKTHTTEDIKKQFEHLANGEVTDQR---VSTAGRIMS 62
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
R GK AF ++D G IQ Y K++ ++ FD K V +GDI+GV G + ++ GE+
Sbjct: 63 IREHGKSAFFHIKDTYGRIQAYVRKDK--TENFDFFKEHVTVGDIIGVEGIVFKSNTGEI 120
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++LV F +L K L P+P+K+HG+ D + YRQRYVDMI+ + FR R+ I+ IR+
Sbjct: 121 TILVEKFQLLVKPLRPMPEKWHGIKDKEILYRQRYVDMIANDDTIKRFRIRSDIIRMIRE 180
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+ GF EVETP+LQ GGA ARPF+T+ N+L D+YLRIATELHLKR ++GGF+K+Y
Sbjct: 181 FLHQKGFYEVETPILQYLTGGASARPFITHCNALDIDMYLRIATELHLKRFIVGGFDKVY 240
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGRIFRNEG+S +H+PEFT+IE+Y+AY+DY+ MMN+TEE++T+ + G I YQG
Sbjct: 241 EIGRIFRNEGISYKHHPEFTSIELYQAYADYEDMMNLTEELITYIVEKLFGTTKITYQGQ 300
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI RPWRR M + +KE G+D E +D K+ + LR G +E +D+
Sbjct: 301 EIDFTRPWRRIKMRDFIKENLGVDILE-DSDEKML--SVLRTHGVDVEIEDR-------- 349
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++ +++++ VE K++QPTF+L++P+EISPLAK HR +TERFEL I GREMANAF
Sbjct: 350 -GHMIEKLWDL-VEDKVIQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAF 407
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ R Q+ KL++ D + LD DF+ ALEY
Sbjct: 408 SELNDPVDQLERFMNQL-------------------KLRDLGDEEAHM-LDKDFIRALEY 447
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S +IRDVIAFP+++
Sbjct: 448 GMPPTGGLGIGIDRLVMLLTDSPNIRDVIAFPLVR 482
>gi|357014548|ref|ZP_09079547.1| lysyl-tRNA synthetase [Paenibacillus elgii B69]
Length = 498
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/516 (46%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++RTH A + + Y + EE + + V +AGR++ +R
Sbjct: 13 IRRNKLDELRGLGVDPFGQKFERTHHAGDIFKAYED-KSKEELEAHSAEVIIAGRIMQKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y + L ++ ++ +DIGD++GV G++ +T+ GELSV
Sbjct: 72 EMGKAGFAHIQDITGKIQIYVRADALEEAKYKAYEL-LDIGDLIGVRGTVFKTKTGELSV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
NS +L+KSLLPLP+KYHGL DV+ RYRQRYVD+I +V F R+KI+ +R+ +
Sbjct: 131 KANSVEVLSKSLLPLPEKYHGLKDVELRYRQRYVDLIMNQDVQQTFILRSKIIQSMRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DSRGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLIVGGMEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TEE++ H A V G I YQ EI
Sbjct: 251 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMKLTEEMIAHIAQEVLGTTKITYQDQEI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + +KE TG+DF+ +++ E R L + +E + G
Sbjct: 311 DLAPSWRRVSMVDAIKEVTGVDFS-----VQMTDEEAHR-----LAKEHNVPVEPMMTFG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N+ FE VE L+QPTF+ +P+ ISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 361 HIVNQFFETFVEETLIQPTFITGHPVAISPLAKKNEQDPRFTDRFELFIVAREHANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ + ++ +D ++E +D+DFV ALEYGM
Sbjct: 421 LNDPIDQRERFEAQLVER------------------EQGNDEAHE--MDEDFVRALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP+++ +Q
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPLMRERQ 496
>gi|389571436|ref|ZP_10161531.1| lysyl-tRNA synthetase [Bacillus sp. M 2-6]
gi|388428836|gb|EIL86626.1| lysyl-tRNA synthetase [Bacillus sp. M 2-6]
Length = 499
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++R +G++P+ ++DR+H + Q+ Y + E+ + V++AGR++ +R
Sbjct: 17 VRRDKMNKMREEGIDPFGERYDRSHQSAQIIADYDEFSK-EDLEEKAAQVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + + ++ K D+GDI+GV+G++ +T GELS+
Sbjct: 76 GKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKS-SDLGDIIGVTGTVFKTNVGELSI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I PE F R+KI+ +R+ +
Sbjct: 135 KATSFEVLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSKGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +MN+TE ++ H A V G TI Y EI
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMNLTENLIAHIAQEVLGTTTIQYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M VKEATG+DF ++ V +E A G+E I S +VG
Sbjct: 315 DLKPEWKRLHMVEAVKEATGVDF---WQEMSV-EEAKQHAADHGVE------ITKSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 365 HIINEFFEQKVEETLVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +DDDFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--LMDDDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 497
>gi|386756659|ref|YP_006229875.1| lysyl-tRNA synthetase [Bacillus sp. JS]
gi|384929941|gb|AFI26619.1| lysyl-tRNA synthetase [Bacillus sp. JS]
Length = 499
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/518 (47%), Positives = 341/518 (65%), Gaps = 42/518 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHIQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y EI
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR-----ALGDGLENKDKFVIES 419
L+ W+R M + VKEATG+DF KE T+ A G+E KD
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDF---------WKEVTVEQAREYAKEHGVEIKD------ 359
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
S +VG+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE A
Sbjct: 360 SMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHA 419
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAF+EL DP+DQR R EEQ+++ R A E +D+DFV A
Sbjct: 420 NAFTELNDPIDQRERFEEQLKE----REAGNDEAH----------------LMDEDFVEA 459
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 460 LEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|2501020|sp|Q53638.1|SYK_STAAU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|567884|gb|AAA53114.1| lysyl-tRNA synthetase [Staphylococcus aureus]
Length = 495
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EERKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE AN F+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANRFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|157690864|ref|YP_001485326.1| lysyl-tRNA synthetase [Bacillus pumilus SAFR-032]
gi|157679622|gb|ABV60766.1| lysine--tRNA ligase [Bacillus pumilus SAFR-032]
Length = 499
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++R +G++P+ ++DR+H + Q+ Y + E+ ++ V++AGR++ +R
Sbjct: 17 VRRDKMNKMREEGIDPFGERYDRSHQSAQIIAEYDEFSK-EDLEEKSAQVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + + ++ K D+GDI+GV+G++ +T GELS+
Sbjct: 76 GKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKS-SDLGDIIGVTGTVFKTNVGELSI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I PE F R+KI+ +R+ +
Sbjct: 135 KATSFEVLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSKGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +MN+TE ++ H A V G TI Y EI
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMNLTENLIAHIAEEVLGTTTIQYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M VKEATG+DF ++ V +E A G+E I + +VG
Sbjct: 315 DLKPEWKRLHMVEAVKEATGVDF---WQEMSV-EEAQQHAADHGIE------ITKNMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 365 HIINEFFEQKVEETLVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +DDDFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--LMDDDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 497
>gi|386038759|ref|YP_005957713.1| lysyl-tRNA synthetase [Paenibacillus polymyxa M1]
gi|343094797|emb|CCC83006.1| lysyl-tRNA synthetase [Paenibacillus polymyxa M1]
Length = 508
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 341/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELRS G++P+ K+ RT A L Y L EE +N VS+AGR++A+R
Sbjct: 23 IRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTK-EELEEKNIEVSIAGRIMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + + + +D+GDI+GV G + +T+ GE ++
Sbjct: 82 VMGKASFAHIQDLSGRIQIYVRQDTVPEANYKAFGI-LDLGDIVGVKGVLFKTKTGETTI 140
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV F R++I+ +R+ +
Sbjct: 141 KVLDIEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYL 200
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA A+PFVT+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 201 DSLGYLEVETPTLHSIAGGAAAKPFVTHHNALDMQLYMRIAIELHLKRLIVGGMEKVYEI 260
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G I YQG E+
Sbjct: 261 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMQLTENMVAHIAQEVLGTQHIQYQGQEV 320
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE TG+DF+ +++ E R L + K +E + G
Sbjct: 321 DLTPQWRRVSMVDAVKEVTGVDFSA-----QMSNEEAHR-----LAKEHKVPVEPHMTFG 370
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTF+ +P+EISPLAK + + T+RFELF+ RE ANAF+E
Sbjct: 371 HILNAFFEHFVEETLIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFVVAREHANAFTE 430
Query: 485 LTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
L DP+DQR R E Q+ R+H +D +++ +DDDF+ ALEY
Sbjct: 431 LNDPIDQRQRFEAQLLEREH--------------------GNDEAHQ--MDDDFIRALEY 468
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 469 GMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|398309167|ref|ZP_10512641.1| lysyl-tRNA ligase [Bacillus mojavensis RO-H-1]
Length = 499
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/513 (47%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++R G++P+ +++RTH + Q+ Y++L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQMRENGIDPFGARFERTHQSEQIIAAYQNLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFDLLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E ++ A+E A G+E KD S +VG
Sbjct: 315 ELKPEWKRIHMVDAVKEATGVDFWEEVT-VEQAREY---AKEHGVEIKD------SMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|220930923|ref|YP_002507831.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219992233|gb|ACL68836.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 491
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/517 (48%), Positives = 349/517 (67%), Gaps = 39/517 (7%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A R++ +EL G++ Y K+ ++ A ++++ + E VS++GR++A+
Sbjct: 14 AQRLENKKELEKNGIKTYGEKYPVSNHAREIEDNFEEF--------EGKKVSLSGRIMAK 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F ++D +G IQLY K ++ ++ +L +DIGDI+GV+G + +T +G++S
Sbjct: 66 RTHGKASFADIQDVTGKIQLYV-KVDIVGEKEYELFTGLDIGDIIGVTGEVFKTRRGQIS 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V+SF +LTKSL PLP+K+HGL D + RYRQRY+D+I PEV F R+KI+ EIRK
Sbjct: 125 VKVHSFRLLTKSLRPLPEKWHGLRDKELRYRQRYLDLIVNPEVRKTFITRSKIIREIRKY 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E GF+EVETP++ AGGA ARPF+T+HN+L DLYLRIA EL+LKR+++GGFE+++E
Sbjct: 185 LEDKGFLEVETPMMHPIAGGANARPFITHHNALDIDLYLRIAPELYLKRLIVGGFERVFE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
I R FRNEG+S +HNPEFT +E+Y+A +DY MM++TE+++ + A V G I YQG E
Sbjct: 245 INRNFRNEGMSYKHNPEFTMLELYQAQADYHDMMDLTEDLIYNVAKKVLGTTKISYQGQE 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L PW R TM VKE TG+DFNE+ +D +E A G G+E +E PS
Sbjct: 305 IDLTPPWNRVTMVEAVKEHTGVDFNEIKSD----EEARKAAEGLGIE------LEGKPSR 354
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G +LNE+FE VE KLVQPTF++DYPIE+SPLAK + T RFE FI E+ANAFS
Sbjct: 355 GKVLNEIFEEKVEDKLVQPTFIMDYPIEVSPLAKRKDDNPDFTYRFEAFINSWEIANAFS 414
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL +P+DQR R EEQV+Q RA + DD + +D+D+V ALEYG
Sbjct: 415 ELNNPIDQRERFEEQVKQ----RA--------------QGDDEAQ--MMDEDYVRALEYG 454
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPP G+G+GIDRL+M+LT+S SIRDVI FP ++ ++
Sbjct: 455 MPPTGGLGIGIDRLIMVLTDSPSIRDVILFPTMRPEK 491
>gi|302876581|ref|YP_003845214.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|307687256|ref|ZP_07629702.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|302579438|gb|ADL53450.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
Length = 508
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/516 (47%), Positives = 340/516 (65%), Gaps = 43/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R++K+++ + G +P+ YK DRTH++N+++E + L E V VAGR++++R
Sbjct: 29 RMQKLKDAQEAGEDPFDVYKVDRTHTSNEVKENFEDL--------EEKEVVVAGRLMSKR 80
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G +QL+ + + + ++ + K +DIGD + V+G + +T+ GE++V
Sbjct: 81 VHGKAGFCDIHDRYGKLQLHVKIDNIGEEKLKKFKT-LDIGDFISVTGKVFKTKTGEITV 139
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V + LTKSL PLP+KYHGL D D RYRQRYVD+I PEV + F KR+ I++ +R+ +
Sbjct: 140 SVTDYQPLTKSLRPLPEKYHGLKDTDLRYRQRYVDLIMNPEVKETFMKRSAIITAMREYL 199
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETP+L AGGA ARPFVT+HNSL D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 200 DQHAYIEVETPILSPIAGGAAARPFVTHHNSLDIDMYLRIATELYLKRLIVGGFEKVYEI 259
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S RHNPEFT IE+YEAY+DY MM +TE +V + V G + YQG EI
Sbjct: 260 GRNFRNEGISVRHNPEFTMIELYEAYADYNDMMVLTENMVAYICKKVLGTTKVTYQGTEI 319
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFNE+ D ++AKE L L+ + K+ +
Sbjct: 320 DFTPPWRRITMVDAVKEYAGVDFNEIKTDEEARQIAKEKHLE-----LKKELKYYTK--- 371
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
G +LNE++E E ++QPTF+ DYP+EISPL K R + TERFE F+ GRE+ NA
Sbjct: 372 --GEILNELYEAFGEEHMIQPTFIYDYPVEISPLTKKKRGNEAFTERFEGFVFGRELCNA 429
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP+ Q+ R +Q+++ + DD +Y +DDDF+TALE
Sbjct: 430 YSELNDPIVQKERFLQQLKER------------------EHGDDEAY--MMDDDFITALE 469
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP GMG+GIDRLVM LT+SASIRDV+ FP +K
Sbjct: 470 IGMPPTGGMGMGIDRLVMFLTDSASIRDVLLFPTMK 505
>gi|239637503|ref|ZP_04678477.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
gi|239596948|gb|EEQ79471.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
Length = 495
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 343/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH-VSVAGRVVAR 123
+R +K++ELR G++P+ ++DR+ SA +L+ + + E E + V++AGR++ +
Sbjct: 11 VRRQKLQELRDLGIDPFGQRYDRSASAAELKSAWDEFSKEELHEKEEESHVAIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D S IQ+Y K+++ +QFD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSEQIQIYVRKDQIGEEQFDLWK-HADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNQKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVLGSAKVQYNGTE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R + + VKEATG+DF + +D +E A G+E I +
Sbjct: 310 IDLESSWKRLHIVDAVKEATGVDFYNVKSD----EEAKALAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PI+ISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIDISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q+ + ++ +D ++E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKERFEAQLVEK------------------EQGNDEAHE--MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|194017974|ref|ZP_03056581.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
gi|194010311|gb|EDW19886.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
Length = 499
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++R +G++P+ ++DR+H + Q+ Y + E+ ++ V++AGR++ +R
Sbjct: 17 VRRDKMNKMREEGIDPFGERYDRSHQSAQIIAEYDEFSK-EDLEEKSAQVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + + ++ K D+GDI+GV+G++ +T GELS+
Sbjct: 76 GKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKS-SDLGDIIGVTGAVFKTNVGELSI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I PE F R+KI+ +R+ +
Sbjct: 135 KATSFEVLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSKGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +MN+TE ++ H A V G TI Y EI
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMNLTENLIAHIAEEVLGTTTIQYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M VKEATG+DF ++ + +E A G+E I + +VG
Sbjct: 315 DLKPEWKRLHMVEAVKEATGVDF---WQEMSI-EEAKQHAADHGIE------ITKNMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 365 HIINEFFEQKVEETLVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +DDDFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--LMDDDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 497
>gi|326391795|ref|ZP_08213313.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325992153|gb|EGD50627.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 547
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/579 (43%), Positives = 369/579 (63%), Gaps = 55/579 (9%)
Query: 8 STLSSLPISFRHVIRRRT-----SLTFVRCRSSTSITVSAGTRNRRASSSSTSTSDREAV 62
S L S+ I F+ +I + + SL FV S + V+ N + +T + +
Sbjct: 11 SVLCSISIYFKEIISKISLNNTLSLQFV-LEQSERMWVNMSNSN---DNIWNNTEELNEL 66
Query: 63 RALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R +K+ LRS G+EPY +++RT+ ++ ++ Y N E V++AGR++
Sbjct: 67 LRIRREKLNILRSMGVEPYGIDRFERTNVSSDIKNDY--------ENFEGKVVTLAGRIM 118
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++RA GK +F ++D G IQ+Y + + + ++ K+ +DIGDI+GV+G + +++ GE
Sbjct: 119 SKRAHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKI-LDIGDIIGVTGEVFKSKTGE 177
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV +VF KR KI+ IR
Sbjct: 178 ITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIR 237
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR+++GG EK+
Sbjct: 238 EFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKRLIVGGLEKV 297
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ + A VNG I YQG
Sbjct: 298 YEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQG 357
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIE 418
EI L PW+R TM + +KE G+DFNE+ D +++AK L +G++
Sbjct: 358 TEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDAEAVEIAKRLNLET-KEGMQK------- 409
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
G ++ VF+ +VE L+QPTFV+DYP+EISPLAK + T RFE FI GRE+
Sbjct: 410 -----GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNPAFTSRFEAFIYGREV 464
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQ+ R EQ++Q +E+ D + +D+DF+
Sbjct: 465 ANAFSELNDPIDQKERFLEQLKQ-------------------REAGDEEAHM-MDEDFIN 504
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 505 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 543
>gi|403743453|ref|ZP_10953037.1| lysyl-tRNA synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122697|gb|EJY56896.1| lysyl-tRNA synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 493
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/521 (46%), Positives = 340/521 (65%), Gaps = 48/521 (9%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE-----ESNSENDHVSVAGR 119
+RI+K+ LR +G++P+ ++ TH A + LA GE E + + HV +AGR
Sbjct: 9 MRIEKMNALRERGIDPFGARYPVTHHAADI------LAFGEGKDKDELETVSLHVRIAGR 62
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ RR GK F L D +G IQ+Y + + L Q+D ++ +D+GD +GV G++ RT +
Sbjct: 63 MMVRRGHGKATFAVLNDLTGNIQIYAKLDVLGDAQYDMFQL-LDLGDFIGVEGTVFRTNR 121
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE++VL +L K+L PLP+K+HGL D++ RYRQRY+D+I P+V +F R++I+
Sbjct: 122 GEITVLAEQITVLAKALRPLPEKWHGLKDIETRYRQRYLDLIVNPDVRQIFIMRSRIIQA 181
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR + G++EVETP L A GA ARPF+T+HN+L +L+LRIA ELHLKR+++GG E
Sbjct: 182 IRDFLADRGYLEVETPTLHTVASGAHARPFLTHHNALDMELHLRIAIELHLKRLIVGGLE 241
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YEIGR++RNEG+STRHNPEFT +E+YEAY+D+ +M++TE ++ H AL V G L + Y
Sbjct: 242 RVYEIGRVYRNEGVSTRHNPEFTMLELYEAYADFHDIMDLTEAMIRHAALTVTGSLHLVY 301
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFV 416
EI LE PWRR M +LV+E TG+DF + D +A+E +R
Sbjct: 302 GDAEIDLESPWRRAHMLDLVREHTGVDFRTIDGDDAARAIAREHGVR------------- 348
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E + G++LNE FE VE KL+QPTFV +P+EISPLAK + T+RFELFI GR
Sbjct: 349 FEEHMTYGHILNEFFEQRVEDKLIQPTFVYGHPVEISPLAKKNADDPRFTDRFELFIVGR 408
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAFSEL DP+DQR R Q+R EK + E+ +E LD+DF
Sbjct: 409 EHANAFSELNDPIDQRERFMAQLR-----------EKEAGNEEAQE---------LDEDF 448
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+TALE+GMPP G+G+GIDRLVMLLT SIRDV+ FP+++
Sbjct: 449 LTALEHGMPPTGGLGVGIDRLVMLLTGQPSIRDVLLFPLMR 489
>gi|300861816|ref|ZP_07107896.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|422738820|ref|ZP_16794007.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2141]
gi|300848341|gb|EFK76098.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|315145398|gb|EFT89414.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2141]
Length = 498
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQIMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMADAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|403069048|ref|ZP_10910380.1| lysyl-tRNA ligase [Oceanobacillus sp. Ndiop]
Length = 493
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/513 (47%), Positives = 337/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ + R KGL+P+ K+ RTH A +L E Y + EE D V++AGR++ +R
Sbjct: 11 VRRDKLIDYREKGLDPFGGKYTRTHLAEELIEKYDQYSK-EELEEMKDEVTIAGRLMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D SG +QLY K+ + D ++ D+GDI+GV+G M +++ GELSV
Sbjct: 70 GKGKAGFAHLQDLSGQLQLYVRKDSIGEDAYEIFNT-TDLGDIVGVTGVMFKSKVGELSV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLP+KYHGL D+++RYRQRY+D+I+ E + F R++I+ +R+ +
Sbjct: 129 KATEFHLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNMESRETFVLRSRIIQSMREYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 NGQGFLEVETPMMHSIPGGASARPFITHHNALDIDLYMRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G + Y E+
Sbjct: 249 GRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMALTENLVAHIAKEVLGSTKVQYGEYEV 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + VKEATG+DF K + RAL + I ++ + G
Sbjct: 309 DLEPEWTRLHMVDAVKEATGVDF------WKQMTDEEARALA----KEHSIEINNTMAFG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 359 HIVNEFFEQKVEETLIQPTFIYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ R A +D+ Y +D+DF+ ALEYGM
Sbjct: 419 LNDPIDQRERFEAQVKE----RDAG-------------NDEAHY---MDEDFLEALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 459 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 491
>gi|325288418|ref|YP_004264599.1| lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963819|gb|ADY54598.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 491
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 344/513 (67%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ KV EL++KG+EPYA +++RTH + ++ + L E VSVAGR++++R
Sbjct: 14 IRLDKVSELKAKGIEPYADRYERTHISEEIINGFDQL--------EEKEVSVAGRIMSKR 65
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y + ++F+ K +DIGDI+GV G + RT+KGE+S+
Sbjct: 66 DMGKTCFAHIQDIGGRIQIYSRVDAFGEEKFETFKS-LDIGDIIGVKGIVFRTKKGEISI 124
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+KSL LP+K+HGLT+V+ RYRQRY+D+I +V F R++I+ +R+ +
Sbjct: 125 RAEEYRILSKSLRNLPEKFHGLTNVETRYRQRYLDLIMNSDVKQTFIVRSQIIRAMREYL 184
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP L GGA ARPF+T+HN+L LY+RIA EL LKR+++GGFEK+YEI
Sbjct: 185 EDKGFLEVETPTLMTIPGGATARPFITHHNALDMQLYMRIALELPLKRLIVGGFEKVYEI 244
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+S +HNPEFT +E+Y+AY+DY+ +MN+TE+++ + V+ L + YQG I
Sbjct: 245 GRIFRNEGISVKHNPEFTMMELYQAYADYEDIMNLTEDMIIYITRKVHNTLELSYQGETI 304
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+PW+R M +L+KE TGIDF E+ D + RA+ D +I + G
Sbjct: 305 NFAKPWKRVKMLDLIKEYTGIDFEEIQTDEEA------RAVADS----RGLIIGKDETKG 354
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++N FE VE KL+QPTFV+ +P++ISPLAK + R+ T+RFELFI GRE ANAFSE
Sbjct: 355 KIINAFFEEYVESKLIQPTFVIGHPVDISPLAKRNARNPEYTDRFELFIYGRETANAFSE 414
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+Q+ + ++ D+ ++ LD+DF+ +LEYG+
Sbjct: 415 LNDPIDQRGRFEKQMVER------------------EKGDEEAH--MLDEDFLQSLEYGL 454
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+SASIRDVI FP +K
Sbjct: 455 PPTGGLGIGIDRLVMLLTDSASIRDVILFPTMK 487
>gi|399056036|ref|ZP_10743588.1| lysyl-tRNA synthetase (class II) [Brevibacillus sp. CF112]
gi|433547026|ref|ZP_20503309.1| lysyl-tRNA ligase [Brevibacillus agri BAB-2500]
gi|398046461|gb|EJL39070.1| lysyl-tRNA synthetase (class II) [Brevibacillus sp. CF112]
gi|432181669|gb|ELK39287.1| lysyl-tRNA ligase [Brevibacillus agri BAB-2500]
Length = 506
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/516 (47%), Positives = 341/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++R G +P+ K+++TH A + + + EE +E V++AGR++A+R
Sbjct: 23 VRHDKMNQIREWGFDPFGKKFEQTHHAADIVKAFGD-KTKEELEAEEHVVTIAGRLMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
A GK +F L D SG IQ+Y ++ + + KVF DIGD++G+ G + +T+ GEL
Sbjct: 82 AMGKASFAQLLDRSGQIQIYVRQDTIGEEAH---KVFEISDIGDLIGIRGVVFKTKTGEL 138
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV F L+KSL PLP+KYHGL D++ RYR+RYVD+I PEV D F R++I++ +R+
Sbjct: 139 SVKAKEFTYLSKSLRPLPEKYHGLKDIETRYRKRYVDLIVNPEVRDTFITRSRILTSMRR 198
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++LG++EVETP L AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+Y
Sbjct: 199 YLDNLGYLEVETPTLHAIAGGASARPFVTHHNALDMQLYMRIAIELHLKRLIVGGLEKVY 258
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR++RNEG+STRHNPEFT IE+YEAY+DYQ +M +TEE++ H A V G I+YQG
Sbjct: 259 EIGRVYRNEGISTRHNPEFTMIELYEAYADYQDIMTLTEEMIAHIAQEVLGTTKIEYQGN 318
Query: 363 EICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L WRR M +L+KE G+DF E+ +D RAL + +E
Sbjct: 319 EIDLTPKWRRVHMVDLIKENLGVDFWKEMSDD-------EARALA----KEHGVAVEPHH 367
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G+++NE FE +E L+QPTFV +P+ ISPLAK + T+RFELFI RE ANA
Sbjct: 368 TFGHVVNEFFEQKLEHTLIQPTFVYGHPVAISPLAKKNDEDPRFTDRFELFIVAREHANA 427
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E Q + EK++ ++ E +DDDF+ ALE
Sbjct: 428 FTELNDPIDQRERFEAQ-----------LLEKAAGNDEAHE---------MDDDFIEALE 467
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 468 YGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPHMR 503
>gi|387928147|ref|ZP_10130825.1| lysyl-tRNA synthetase [Bacillus methanolicus PB1]
gi|387587733|gb|EIJ80055.1| lysyl-tRNA synthetase [Bacillus methanolicus PB1]
Length = 494
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 340/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ELR KG +P+ +++RTH +L Y L + +E +N V +AGR++ +R
Sbjct: 12 VRRDKMNELRQKGYDPFGKRFERTHHTQELINTYGDL-DKDEIEEKNVSVKIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y + + +Q++ D+GDI+GV+G++ +T+ GELSV
Sbjct: 71 GKGKAGFAHIQDLTGQIQIYVRLDAVGEEQYEIFNS-ADLGDIVGVTGTLFKTKVGELSV 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF++LTKSL PLP+K+HGL DV++RYRQRY+D+I E D F R++I+ +R+ +
Sbjct: 130 KVESFILLTKSLRPLPEKFHGLKDVEQRYRQRYLDLIMNSESKDTFITRSRIIQSMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DDHGYLEVETPMMHAIAGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G TI Y E+
Sbjct: 250 GRVFRNEGVSTRHNPEFTMIELYEAYADYRDIMKLTENLIAHIAQEVLGTTTIQYGDHEV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + +KE TG+DF K RAL + I + G
Sbjct: 310 ELKPEWKRLHMADAIKEHTGVDF------WKEMSTQEARALA----KEHNVEINDNMLFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 360 HIVNEFFEQKVEENLIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFIVGREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +DDDFV ALEYGM
Sbjct: 420 LNDPIDQRERFEAQLKER------------------EQGNDEAH--MMDDDFVEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 460 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 492
>gi|428765889|ref|YP_007152000.1| lysyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
gi|427184062|emb|CCO71286.1| lysyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
Length = 498
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQIMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDHFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMADAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|330839287|ref|YP_004413867.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
gi|329747051|gb|AEC00408.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
Length = 511
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/525 (47%), Positives = 347/525 (66%), Gaps = 35/525 (6%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
+T D + +R +K+E+ R G+ P+ ++++ T A++L + L GEE+ SE +
Sbjct: 9 ATQKEDLNDLMRVRREKMEKFREMGVAPFGHRYEVTRHADELLAEFASL--GEEAESETE 66
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
VS+AGR++A R GK +F L D SG IQ+Y + + L +++ + K+ +DIGDI+GV G
Sbjct: 67 -VSIAGRLMAIRGHGKASFAVLMDLSGKIQIYFKLDVLGEEKYKEFKL-LDIGDIIGVRG 124
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
+ RT +GEL+V V+ F +L+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV D F
Sbjct: 125 VVFRTRRGELTVRVDDFTLLSKSLRPLPEKFHGLKDVEMRYRQRYVDLIMNPEVKDTFIA 184
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
R KI+ IR+ ++ GF+EVETPV+ AGGA ARPFVTYHN+L LYLRIATEL+LKR
Sbjct: 185 RTKIIQSIRRYLDERGFLEVETPVMSTIAGGAAARPFVTYHNALDMKLYLRIATELNLKR 244
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GG E++YEIGRIFRNEG+ RHNPEFT+IE+Y+AY+DY +M++TE I A V
Sbjct: 245 LIVGGLERVYEIGRIFRNEGIDVRHNPEFTSIEIYQAYADYNDLMDVTEGICCQAAKDVL 304
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G + Y+G EI L + RR +M++ VKEATG DF + RA+ D +
Sbjct: 305 GTTALTYEGTEIDLSK-IRRISMNDAVKEATGKDF------MSAQTVEEARAMADAI--- 354
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
E +G +LNE FE VE L+QPTF+ +P EISPLAK + +T+RFE +
Sbjct: 355 -GVAYEEKHGIGGILNEAFEAKVEESLIQPTFITGHPTEISPLAKRNPEDPRITDRFEFY 413
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
+ GRE+AN F+EL DP+DQ+ R EQV+Q + DD ++ +
Sbjct: 414 VYGRELANGFTELNDPIDQKERFLEQVKQR------------------EAGDDEAH--PM 453
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D DF+TA+EYG+PP G+G+GIDRLVMLLT+S+SIRDV+ FP ++
Sbjct: 454 DSDFITAMEYGLPPTGGLGIGIDRLVMLLTDSSSIRDVLFFPHMR 498
>gi|310639546|ref|YP_003944304.1| lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
gi|309244496|gb|ADO54063.1| Lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
Length = 508
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 341/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELRS G++P+ K+ RT A L Y L EE +N VS+AGR++A+R
Sbjct: 23 IRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTK-EELEEKNIEVSIAGRIMAKR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + + + +D+GDI+GV G + +T+ GE ++
Sbjct: 82 VMGKASFAHIQDLSGRIQIYVRQDTVPEANYKAFGI-LDLGDIVGVKGVLFKTKTGETTI 140
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV F R++I+ +R+ +
Sbjct: 141 KVLDIEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYL 200
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA A+PFVT+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 201 DSLGYLEVETPTLHAIAGGAAAKPFVTHHNALDTQLYMRIAIELHLKRLIVGGMEKVYEI 260
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I YQG E+
Sbjct: 261 GRVYRNEGVSTRHNPEFTLIELYEAYADYKDIMQLTENLIAHIAQEVLGTQHIQYQGQEV 320
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE TG+DF+ +++ E R L + K +E + G
Sbjct: 321 DLTPQWRRVSMVDAVKEVTGVDFSA-----QMSNEEAHR-----LAKEHKVPVEPHMTFG 370
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTF+ +P+EISPLAK + + T+RFELF+ RE ANAF+E
Sbjct: 371 HILNAFFEHFVEETLIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFVVAREHANAFTE 430
Query: 485 LTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
L DP+DQR R E Q+ R+H +D +++ +DDDF+ ALEY
Sbjct: 431 LNDPIDQRQRFEAQLLEREH--------------------GNDEAHQ--MDDDFIRALEY 468
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 469 GMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|365154861|ref|ZP_09351259.1| lysyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363628972|gb|EHL79665.1| lysyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 495
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/526 (46%), Positives = 350/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T D+ AVR +K+E LRSKG++P+ +++RTH + +++ Y EE ++N
Sbjct: 2 SHEDTHDQFAVRR---EKLESLRSKGIDPFGKRFERTHLSQEIRSEYE-ALENEELENKN 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y K+ + ++D K D+GDI+GV+
Sbjct: 58 VKVAVAGRIMTKRGKGKAGFAHIQDLTGQIQIYVRKDNVGDSEYDLFKT-ADLGDIVGVT 116
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G++ +T+ GELS+ V+ F +LTKSL PLPDK+HGL DV++RYRQRY+D+I PE F
Sbjct: 117 GTVFKTKVGELSIKVDHFELLTKSLRPLPDKFHGLKDVEQRYRQRYLDLIVNPESKQTFI 176
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ +++ G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 177 TRSLIIQSMRRYLDAHGYLEVETPMMHAIAGGAAARPFITHHNALDMPLYMRIAIELHLK 236
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +++H A V
Sbjct: 237 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMIELYEAYADYTDIMKLTENLISHIAQEV 296
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE TG+DF K + RAL
Sbjct: 297 LGTQVIQYGEHTVDLTPEWRRLHMVDAIKEYTGVDF------WKQMSDEEARALA----K 346
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ I + G+++NE FE VE KL+QPTFV +P+EISPLAK + + T+RFEL
Sbjct: 347 EHNIEITDNMKFGHIVNEFFEQRVEDKLIQPTFVYGHPVEISPLAKKNEKDPRFTDRFEL 406
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R E Q+++ ++ +D ++
Sbjct: 407 FIVGREHANAFTELNDPIDQRQRFEAQLKER------------------EQGNDEAH--M 446
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DFV ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP+++
Sbjct: 447 MDEDFVEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPLMR 492
>gi|312623017|ref|YP_004024630.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203484|gb|ADQ46811.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 497
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/516 (47%), Positives = 343/516 (66%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK++EL+ PY K+D TH + ++E + E V VAGR++++R
Sbjct: 20 RIKKLKELQQNKYNPYEKVKYDPTHYSTDIKENFEVF--------EGKFVCVAGRMLSKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++++ K + DIGDI+GV G + +T KGE+SV
Sbjct: 72 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL DVD RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 132 KAKEIEMLTKCLRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 192 DDRGFLEVETPVLSPVAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MM++TE+++T A V G L I YQG EI
Sbjct: 252 GRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMDLTEKLITTVAQEVLGTLKITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM + + G+DF L K+AK+ G+E +E +
Sbjct: 312 DLTPPWQRLTMVEAINKYVGVDFENVTSLDEARKIAKDL-------GIE------VEENW 358
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+G+++NE+FE VE LVQPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 359 QIGHIINEIFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 418
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 419 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 458
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494
>gi|229546902|ref|ZP_04435627.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|255971768|ref|ZP_05422354.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
gi|256855222|ref|ZP_05560583.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
gi|257088707|ref|ZP_05583068.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|307290186|ref|ZP_07570104.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|312904623|ref|ZP_07763778.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|312952668|ref|ZP_07771532.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|384517348|ref|YP_005704653.1| lysyl-tRNA synthetase [Enterococcus faecalis 62]
gi|397698790|ref|YP_006536578.1| lysyl-tRNA synthetase [Enterococcus faecalis D32]
gi|422686421|ref|ZP_16744618.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4000]
gi|422687635|ref|ZP_16745811.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0630]
gi|422691657|ref|ZP_16749686.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0031]
gi|422706377|ref|ZP_16764078.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0043]
gi|422726404|ref|ZP_16782851.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0312]
gi|422733290|ref|ZP_16789611.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0645]
gi|229307830|gb|EEN73817.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|255962786|gb|EET95262.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
gi|256709735|gb|EEU24782.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
gi|256997519|gb|EEU84039.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|306498742|gb|EFM68241.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|310629456|gb|EFQ12739.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|310631975|gb|EFQ15258.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|315028813|gb|EFT40745.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4000]
gi|315153548|gb|EFT97564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0031]
gi|315156272|gb|EFU00289.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0043]
gi|315158583|gb|EFU02600.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0312]
gi|315160788|gb|EFU04805.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0645]
gi|315579387|gb|EFU91578.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0630]
gi|323479481|gb|ADX78920.1| lysyl-tRNA synthetase [Enterococcus faecalis 62]
gi|397335429|gb|AFO43101.1| lysyl-tRNA synthetase [Enterococcus faecalis D32]
Length = 498
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQIMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|29374909|ref|NP_814062.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
gi|227520053|ref|ZP_03950102.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|227555914|ref|ZP_03985961.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|229550491|ref|ZP_04439216.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
gi|255974768|ref|ZP_05425354.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
gi|256762063|ref|ZP_05502643.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256956804|ref|ZP_05560975.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256960609|ref|ZP_05564780.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|256964191|ref|ZP_05568362.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|257078473|ref|ZP_05572834.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|257081555|ref|ZP_05575916.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|257084203|ref|ZP_05578564.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|257088030|ref|ZP_05582391.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
gi|257417633|ref|ZP_05594627.1| lysyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
gi|257418642|ref|ZP_05595636.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
gi|293382696|ref|ZP_06628621.1| lysine--tRNA ligase [Enterococcus faecalis R712]
gi|293388122|ref|ZP_06632649.1| lysine--tRNA ligase [Enterococcus faecalis S613]
gi|294779306|ref|ZP_06744709.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|307268521|ref|ZP_07549896.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|307274232|ref|ZP_07555440.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
gi|307278667|ref|ZP_07559737.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|312908592|ref|ZP_07767534.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|312909260|ref|ZP_07768117.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
gi|422695384|ref|ZP_16753370.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4244]
gi|422698790|ref|ZP_16756675.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1346]
gi|422700049|ref|ZP_16757905.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1342]
gi|422708797|ref|ZP_16766318.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0027]
gi|422712929|ref|ZP_16769689.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309A]
gi|422718253|ref|ZP_16774924.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309B]
gi|422719772|ref|ZP_16776396.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0017]
gi|422723116|ref|ZP_16779654.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2137]
gi|422728443|ref|ZP_16784861.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0012]
gi|422735125|ref|ZP_16791405.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1341]
gi|422867567|ref|ZP_16914142.1| lysine--tRNA ligase [Enterococcus faecalis TX1467]
gi|424678914|ref|ZP_18115752.1| lysine--tRNA ligase [Enterococcus faecalis ERV103]
gi|424679707|ref|ZP_18116521.1| lysine--tRNA ligase [Enterococcus faecalis ERV116]
gi|424684114|ref|ZP_18120840.1| lysine--tRNA ligase [Enterococcus faecalis ERV129]
gi|424688445|ref|ZP_18125051.1| lysine--tRNA ligase [Enterococcus faecalis ERV25]
gi|424691561|ref|ZP_18128084.1| lysine--tRNA ligase [Enterococcus faecalis ERV31]
gi|424695131|ref|ZP_18131515.1| lysine--tRNA ligase [Enterococcus faecalis ERV37]
gi|424696479|ref|ZP_18132824.1| lysine--tRNA ligase [Enterococcus faecalis ERV41]
gi|424701889|ref|ZP_18138055.1| lysine--tRNA ligase [Enterococcus faecalis ERV62]
gi|424704925|ref|ZP_18141011.1| lysine--tRNA ligase [Enterococcus faecalis ERV63]
gi|424706370|ref|ZP_18142377.1| lysine--tRNA ligase [Enterococcus faecalis ERV65]
gi|424719061|ref|ZP_18148289.1| lysine--tRNA ligase [Enterococcus faecalis ERV68]
gi|424719981|ref|ZP_18149107.1| lysine--tRNA ligase [Enterococcus faecalis ERV72]
gi|424722734|ref|ZP_18151759.1| lysine--tRNA ligase [Enterococcus faecalis ERV73]
gi|424733465|ref|ZP_18162025.1| lysine--tRNA ligase [Enterococcus faecalis ERV81]
gi|424754559|ref|ZP_18182468.1| lysine--tRNA ligase [Enterococcus faecalis ERV93]
gi|424755717|ref|ZP_18183578.1| lysine--tRNA ligase [Enterococcus faecalis R508]
gi|39932158|sp|Q839A8.1|SYK_ENTFA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|29342367|gb|AAO80133.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
gi|227072601|gb|EEI10564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|227174971|gb|EEI55943.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|229304348|gb|EEN70344.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
gi|255967640|gb|EET98262.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
gi|256683314|gb|EEU23009.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256947300|gb|EEU63932.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256951105|gb|EEU67737.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|256954687|gb|EEU71319.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|256986503|gb|EEU73805.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|256989585|gb|EEU76887.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|256992233|gb|EEU79535.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|256996060|gb|EEU83362.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
gi|257159461|gb|EEU89421.1| lysyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
gi|257160470|gb|EEU90430.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
gi|291079856|gb|EFE17220.1| lysine--tRNA ligase [Enterococcus faecalis R712]
gi|291082498|gb|EFE19461.1| lysine--tRNA ligase [Enterococcus faecalis S613]
gi|294453592|gb|EFG21991.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|306504727|gb|EFM73927.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|306509194|gb|EFM78256.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
gi|306515182|gb|EFM83722.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|310625379|gb|EFQ08662.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|311290502|gb|EFQ69058.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
gi|315026774|gb|EFT38706.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2137]
gi|315032988|gb|EFT44920.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0017]
gi|315036599|gb|EFT48531.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0027]
gi|315147110|gb|EFT91126.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4244]
gi|315151137|gb|EFT95153.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0012]
gi|315168161|gb|EFU12178.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1341]
gi|315171399|gb|EFU15416.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1342]
gi|315172632|gb|EFU16649.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1346]
gi|315573576|gb|EFU85767.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309B]
gi|315582076|gb|EFU94267.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309A]
gi|329577256|gb|EGG58720.1| lysine--tRNA ligase [Enterococcus faecalis TX1467]
gi|402350617|gb|EJU85519.1| lysine--tRNA ligase [Enterococcus faecalis ERV103]
gi|402355662|gb|EJU90424.1| lysine--tRNA ligase [Enterococcus faecalis ERV116]
gi|402360889|gb|EJU95483.1| lysine--tRNA ligase [Enterococcus faecalis ERV25]
gi|402362116|gb|EJU96656.1| lysine--tRNA ligase [Enterococcus faecalis ERV31]
gi|402362671|gb|EJU97189.1| lysine--tRNA ligase [Enterococcus faecalis ERV129]
gi|402368978|gb|EJV03277.1| lysine--tRNA ligase [Enterococcus faecalis ERV37]
gi|402370853|gb|EJV05042.1| lysine--tRNA ligase [Enterococcus faecalis ERV62]
gi|402377521|gb|EJV11419.1| lysine--tRNA ligase [Enterococcus faecalis ERV41]
gi|402380137|gb|EJV13906.1| lysine--tRNA ligase [Enterococcus faecalis ERV68]
gi|402380535|gb|EJV14285.1| lysine--tRNA ligase [Enterococcus faecalis ERV63]
gi|402388178|gb|EJV21627.1| lysine--tRNA ligase [Enterococcus faecalis ERV65]
gi|402391833|gb|EJV25113.1| lysine--tRNA ligase [Enterococcus faecalis ERV81]
gi|402394944|gb|EJV28091.1| lysine--tRNA ligase [Enterococcus faecalis ERV72]
gi|402400916|gb|EJV33721.1| lysine--tRNA ligase [Enterococcus faecalis ERV73]
gi|402403008|gb|EJV35700.1| lysine--tRNA ligase [Enterococcus faecalis ERV93]
gi|402409002|gb|EJV41448.1| lysine--tRNA ligase [Enterococcus faecalis R508]
Length = 498
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|307286953|ref|ZP_07567028.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|306501899|gb|EFM71188.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
Length = 498
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRDRFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|424735215|ref|ZP_18163685.1| lysine--tRNA ligase [Enterococcus faecalis ERV85]
gi|402404105|gb|EJV36736.1| lysine--tRNA ligase [Enterococcus faecalis ERV85]
Length = 498
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|379794988|ref|YP_005324986.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356871978|emb|CCE58317.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 495
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 344/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIY-RHLANGEESNSENDHVSVAGRVVAR 123
+R +K++EL G++P+ K++R+ ++ L+E + ++ E HVS+AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFNRSGLSSDLKEEWDKYSKEELAEKEEESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ +QFD K+ D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDEQFDIWKI-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +L KSL PLPDK+HGL D+++RYRQRY+D+I+ F R+KI+ E+R
Sbjct: 130 VKAKKFTLLAKSLRPLPDKFHGLQDIEQRYRQRYLDLITNENSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA A+PFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAAKPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMDLTESMVRHIANEVLGSAKVQYGGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE PW R M + VKEATG+DF + +D + AKE A G+E KD
Sbjct: 310 IDLESPWTRLHMVDAVKEATGVDFYNVTSD-EEAKEL---AKEHGIEIKDTM------KY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P +ISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTDISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E Q + EK+ + +D ++E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQRARFEAQ-----------LVEKA-------QGNDEAHE--MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>gi|73663548|ref|YP_302329.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123761498|sp|Q49V26.1|SYK_STAS1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|72496063|dbj|BAE19384.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 495
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH-VSVAGRVVAR 123
+R +K++EL G++P+ K+DRT A L E + + E E + VS+AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGQKFDRTSMATPLHEDWDQFSKEELHEKEEESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ DQF + D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQF-AIWNSADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F KR+KI+ E+R
Sbjct: 130 VKAQSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFIKRSKILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNQQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M+ITE ++ H + V G + Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDITENMIRHISEKVLGTAKVTYGEET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R M + VKE TG+DF + +D ++ + A G+E I +
Sbjct: 310 IDLESKWKRIHMADAVKEETGVDFFNIQSD----EDAKIAAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTFV +PIEISPLAK + T+RFELFI GRE NAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFVYGHPIEISPLAKKNAEDPRFTDRFELFIVGREHGNAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E Q+ + ++ +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRARFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+SASIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSASIRDVLLFPYMR 493
>gi|422702604|ref|ZP_16760433.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1302]
gi|315165840|gb|EFU09857.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1302]
Length = 498
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/513 (47%), Positives = 340/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDIKYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ EK Q +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRDRFEEQ-------------EKEREQ-----GNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|326792441|ref|YP_004310262.1| lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326543205|gb|ADZ85064.1| Lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 509
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/517 (48%), Positives = 344/517 (66%), Gaps = 36/517 (6%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANG--EESNSENDHVSVAGRVV 121
+R K+ L+ KG +P+ K+D T + + + + + E SE H+SVAGR++
Sbjct: 21 VRYDKLAGLQEKGKDPFKITKFDVTAHSESAKAHFESIESTLEEHEMSEKTHLSVAGRIM 80
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
A+R GK +F+T++D G IQ Y K+ L + + K + DIGDI+G+ G + RT+KGE
Sbjct: 81 AKRDMGKASFITIQDQEGRIQSYVRKDELGDEDYADFKKY-DIGDIVGIEGYIFRTQKGE 139
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+SV S +L+KSL LP+KYHGL D + RYRQRYVD+I PEV D F KR+ I+ +R
Sbjct: 140 ISVRAKSVTLLSKSLQILPEKYHGLKDTEMRYRQRYVDLIVNPEVKDTFLKRSAIIRSMR 199
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+++ F+EVETPVL AGGA ARPFVT+HN+L D+Y+RIA EL LKR+++GGF+++
Sbjct: 200 NFLDNKDFIEVETPVLHSIAGGAAARPFVTHHNALDIDMYMRIAPELKLKRLIVGGFDRV 259
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR+FRNEG+S RHNPEFT +E+Y+A++DY MM+ITEE++ H VNG I+Y G
Sbjct: 260 YEIGRVFRNEGMSIRHNPEFTIMELYQAFADYNDMMDITEEMIRHVCKEVNGTAVIEYDG 319
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESS 420
V I L++P+ R +M + VK+ TG+DF + DL+ A RA+ K+K V E
Sbjct: 320 VTIDLDKPFARISMVDAVKQYTGVDFRAI-KDLEEA-----RAIA-----KEKHVAFEEH 368
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LN FE VE L+QPTF+ ++P+EISPL+K TERFELFI GRE AN
Sbjct: 369 HMKGDILNLFFEEFVEEHLIQPTFLTEHPVEISPLSKRKPLDPEYTERFELFIVGREHAN 428
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQR R + Q E RAA DD + E+ D+DF+TAL
Sbjct: 429 AFSELNDPIDQRGRFKRQ----EELRAAG--------------DDEACEI--DEDFLTAL 468
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYG+PP G+G+G+DRLVMLLTNSASIRDV+ FP +K
Sbjct: 469 EYGLPPTGGLGVGVDRLVMLLTNSASIRDVLLFPTMK 505
>gi|251794120|ref|YP_003008851.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247541746|gb|ACS98764.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 505
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR+ G++P+ K++RTH+A + Y L+ E VSVAGR++ +R
Sbjct: 20 IRRDKLDELRALGVDPFGVKFERTHNAKDIVSAYEELSKEELEEKAIK-VSVAGRIMQKR 78
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y K+ + ++++ ++ +DIGDI+G++G + +T GE+SV
Sbjct: 79 GMGKASFAHIQDLSGKIQIYVRKDTVEANKYAAFEM-LDIGDIVGITGVVFKTNTGEVSV 137
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTKSLLPLPDKYHGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 138 KAYEVEVLTKSLLPLPDKYHGLKDVELRYRQRYVDLIVNPDVQQTFITRSRIIQSMRRYL 197
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 198 DSKGYLEVETPTLHSIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLIVGGLEKVYEI 257
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G + I YQG EI
Sbjct: 258 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTMKISYQGQEI 317
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M +LVKE TG+DF+ ++++ E L K +E + G
Sbjct: 318 DLTPQWRRVSMVDLVKEVTGVDFS-----VEMSDEE-----AHALAKVHKVPVEPHMTFG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE E L+QPTFV +P+ ISPLAK + T+RFELF+ RE ANAF+E
Sbjct: 368 HILNAFFETHCEHTLIQPTFVTGHPVAISPLAKKNPVDPRFTDRFELFVVAREHANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ + ++ +D ++E +DDDF+ ALEYGM
Sbjct: 428 LNDPIDQRQRFEAQLVEK------------------EQGNDEAHE--MDDDFIRALEYGM 467
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT++ SIRDV+ FP ++
Sbjct: 468 PPTGGLGIGVDRLVMLLTDAPSIRDVLLFPHMR 500
>gi|392958375|ref|ZP_10323887.1| lysyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
gi|391875545|gb|EIT84153.1| lysyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
Length = 497
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/524 (46%), Positives = 343/524 (65%), Gaps = 34/524 (6%)
Query: 56 TSDREAVRALRIK--KVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH 113
+ D E LR++ K+ L+ G +P+ K+ RTH+A + + ++ EE +
Sbjct: 2 SQDMELNDLLRVRREKLNALQESGQDPFGTKYVRTHAAQDILTQFENVTK-EELEEQGVE 60
Query: 114 VSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGS 173
V++AGR++ +R GK F ++D +G IQ+Y + + + ++ L +DIGDI+GV+G+
Sbjct: 61 VTIAGRIMTKRGKGKAGFAHIQDLTGQIQIYVRLDAVGEESYN-LFTTIDIGDIVGVTGT 119
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
+ +T+ GELSV F +LTKSL PLPDK+HGL DV++RYRQRYVD+I PEV + F +R
Sbjct: 120 VFKTKVGELSVKAKDFQLLTKSLRPLPDKFHGLKDVEQRYRQRYVDLIMNPEVKNTFVER 179
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
+KI+ +R+ ++ G++EVETP + AGGA ARPF+T+HN+L +LY+RIA ELHLKR+
Sbjct: 180 SKIIRSMRRYLDDHGYLEVETPTMHSIAGGASARPFITHHNALDMELYMRIAIELHLKRL 239
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GG EK+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE ++ H A V G
Sbjct: 240 IVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMELTENLIAHIAKDVYG 299
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
T+ Y E+ LE W+R M + VKEATG+DF V RAL +
Sbjct: 300 STTVQYGEYEVNLEPKWKRVHMVDAVKEATGVDF------WPVMTTEEARALA----KEH 349
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
+ + + G+++NE FE VE L+QPTFV +P+EISPLAK + T+RFELFI
Sbjct: 350 NVHVTPAMTYGHIVNEFFEQFVEETLIQPTFVYGHPVEISPLAKKNTEDERFTDRFELFI 409
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
RE ANAFSEL DP+DQR R E Q+++ + + +D ++ +D
Sbjct: 410 VSREHANAFSELNDPIDQRERFEAQLKERD------------------QGNDEAH--MMD 449
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DFV ALEYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 450 EDFVEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 493
>gi|375360772|ref|YP_005128811.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|451348528|ref|YP_007447159.1| lysyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
gi|371566766|emb|CCF03616.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|449852286|gb|AGF29278.1| lysyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
Length = 499
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ E Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRENGIDPFGERFERTHQSQQIIEAYQELSKEELEEKAIE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARGHAKEHGIE------ITNSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|321313752|ref|YP_004206039.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|384173741|ref|YP_005555126.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|418030572|ref|ZP_12669057.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428277497|ref|YP_005559232.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|449092795|ref|YP_007425286.1| lysyl-tRNA synthetase [Bacillus subtilis XF-1]
gi|291482454|dbj|BAI83529.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|320020026|gb|ADV95012.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|349592965|gb|AEP89152.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351471631|gb|EHA31744.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|449026710|gb|AGE61949.1| lysyl-tRNA synthetase [Bacillus subtilis XF-1]
Length = 499
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E ++ A+E A G+E KD S +VG
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDFWEEVT-VEQAREY---AKEHGVEIKD------SMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|418577102|ref|ZP_13141229.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324382|gb|EHY91533.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 495
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH-VSVAGRVVAR 123
+R +K++EL G++P+ K+DRT A L E + + E E + VS+AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGQKFDRTSMATPLHEDWDQFSKEELHEKEEESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ DQF + D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQF-AIWNSADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F KR+KI+ E+R
Sbjct: 130 VKAQSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFIKRSKILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNQQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M+ITE ++ H + V G + Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDITENMIRHISEKVLGTAKVTYGEET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R M + VKE TG+DF + +D ++ + A G+E I +
Sbjct: 310 IDLESKWKRIHMADAVKEETGVDFFNIQSD----EDAKIAAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE NAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNAEDPRFTDRFELFIVGREHGNAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E Q+ + ++ +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRARFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+SASIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSASIRDVLLFPYMR 493
>gi|407797394|ref|ZP_11144337.1| lysyl-tRNA ligase [Salimicrobium sp. MJ3]
gi|407018277|gb|EKE31006.1| lysyl-tRNA ligase [Salimicrobium sp. MJ3]
Length = 493
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 338/514 (65%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ R +G++P+ K++RTH A L E Y + E + V VAGR++ +R
Sbjct: 11 VRLDKMNSYREQGIDPFGDKFERTHLAQDLHESYEEVTKEELEEKQVPAV-VAGRIMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG IQLY K+ + + ++ K D+GDI+GV G M +T GELSV
Sbjct: 70 GKGKTGFAHIQDLSGQIQLYVRKDEIGEENYELFKS-ADMGDIVGVEGVMFKTNVGELSV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLP+K+HGL DV++RYRQRY+D+I+ P + F R+KI+ +R+ +
Sbjct: 129 KAQKFHMLTKSLRPLPEKFHGLKDVEQRYRQRYLDLITNPSSKETFITRSKIIQSMRRYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETP++ G GGA ARPFVT+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 DGLGFLEVETPMMHGIPGGAAARPFVTHHNALDTELYMRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEA+ DY+ +M++TEE++ H A V I Y EI
Sbjct: 249 GRVFRNEGVSTRHNPEFTMLELYEAFGDYRDIMDLTEELIAHIAKDVLNTSKIAYGEQEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
LE W R M + +KE TG+DF E+ +D E A G+E I+ + +
Sbjct: 309 DLEPKWTRLHMADAIKEETGVDFRKEMSDD-----EARQLAEKHGVE------IDKNMAF 357
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAFS
Sbjct: 358 GHIMNEFFEQKVEEKLIQPTFIYGHPVEISPLAKQNPDDKRFTDRFELFIVGREHANAFS 417
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E QV E+R A E +D+DF+ +LEYG
Sbjct: 418 ELNDPIDQRKRFEAQV----EEREAGNDEAH----------------LMDEDFLESLEYG 457
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+G+DRLVMLLTNS+SIRDV+ FP +K
Sbjct: 458 MPPTGGLGIGVDRLVMLLTNSSSIRDVLLFPQMK 491
>gi|407979061|ref|ZP_11159883.1| lysyl-tRNA ligase [Bacillus sp. HYC-10]
gi|407414277|gb|EKF35930.1| lysyl-tRNA ligase [Bacillus sp. HYC-10]
Length = 499
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++R +G++P+ ++DR+H + Q+ Y + E+ + V++AGR++ +R
Sbjct: 17 VRRDKMNKMREEGIDPFGERYDRSHQSAQIIAEYDEFSK-EDLEEKAVQVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + + ++ K D+GDI+GV+G++ +T GELS+
Sbjct: 76 GKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKS-SDLGDIIGVTGTVFKTNVGELSI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F ILTK+L PLPDKYHGL DV++RYRQRY+D+I PE F R+KI+ +R+ +
Sbjct: 135 KATGFEILTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DSKGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +MN+TE ++ H A V G TI Y EI
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMNLTENLIAHIAQEVLGTTTIQYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M VKEATG+DF ++ V +E A G+E I + +VG
Sbjct: 315 DLKPEWKRLHMVEAVKEATGVDF---WQEMSV-EEAKQHAADHGIE------ITKNMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 365 HIINEFFEQKVEETLVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +DDDFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--LMDDDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 497
>gi|304315888|ref|YP_003851033.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777390|gb|ADL67949.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 506
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 340/517 (65%), Gaps = 46/517 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K++ELRS G+EPY K+DRT+ ++++ Y N E V++AGR++++
Sbjct: 19 IRRNKLDELRSLGIEPYGIDKFDRTNMTSEIKNDY--------DNFEGKTVTIAGRIMSK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F ++D G IQLY + + L ++ K+ +DIGDI+GV+G + +++ GE++
Sbjct: 71 RGHGKASFADIQDRDGRIQLYFKLDVLGEKNYEIFKI-LDIGDIIGVTGEVFKSKTGEVT 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +L+KSL LPDK+HGL D D RYRQRYVD+I P V + F KR I+ IR+
Sbjct: 130 IRVQDFKLLSKSLQVLPDKWHGLKDPDLRYRQRYVDLIINPGVKETFIKRTAIIKAIREF 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR+++GG EK+YE
Sbjct: 190 LDSRGFIEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM+ITE + + A VNG I YQG E
Sbjct: 250 MGRVFRNEGMDIRHNPEFTLLELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIVYQGTE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I L PWRR TM + +KE IDFN++ +D +++AK+ L ++
Sbjct: 310 IDLTPPWRRLTMIDAIKEFLDIDFNKVSSDEEAIEIAKKNHLE-------------VKEG 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++ VF+ + E L+QPTF++DYP+EISPLAK + LT RFE FI GRE+AN
Sbjct: 357 MKKGDIIALVFDELCESHLIQPTFIMDYPVEISPLAKRKHDNPALTSRFEAFIYGREVAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R EQ++Q R A E +D+DF+ AL
Sbjct: 417 AFSELNDPIDQKERFIEQLKQ----REAGNDEAH----------------MMDEDFINAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+G+DRL+M +T++ SIRDVI FP +K
Sbjct: 457 EVGMPPTGGLGIGVDRLIMFMTDAYSIRDVILFPTMK 493
>gi|433654046|ref|YP_007297754.1| lysyl-tRNA synthetase (class II) [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292235|gb|AGB18057.1| lysyl-tRNA synthetase (class II) [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 506
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 340/517 (65%), Gaps = 46/517 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K++ELRS G+EPY K+DRT+ ++++ Y N E V++AGR++++
Sbjct: 19 IRRNKLDELRSLGIEPYGIDKFDRTNMTSEIKNDY--------DNFEGKTVTIAGRIMSK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F ++D G IQLY + + L ++ K+ +DIGDI+GV+G + +++ GE++
Sbjct: 71 RGHGKASFADIQDRDGRIQLYFKLDVLGEKNYEIFKI-LDIGDIIGVTGEVFKSKTGEVT 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +L+KSL LPDK+HGL D D RYRQRYVD+I P V + F KR I+ IR+
Sbjct: 130 IRVQDFKLLSKSLQVLPDKWHGLKDPDLRYRQRYVDLIINPGVKETFIKRTAIIKAIREF 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR+++GG EK+YE
Sbjct: 190 LDSRGFIEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM+ITE + + A VNG I YQG E
Sbjct: 250 MGRVFRNEGMDIRHNPEFTLLELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIVYQGTE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I L PWRR TM + +KE IDFN++ +D +++AK+ L ++
Sbjct: 310 IDLTPPWRRLTMIDAIKEFLDIDFNKVSSDEEAIEIAKKNHLE-------------VKEG 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++ VF+ + E L+QPTF++DYP+EISPLAK + LT RFE FI GRE+AN
Sbjct: 357 MKKGDIIALVFDELCESHLIQPTFIIDYPVEISPLAKRKHDNPALTSRFEAFIYGREVAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R EQ++Q R A E +D+DF+ AL
Sbjct: 417 AFSELNDPIDQKERFIEQLKQ----REAGNDEAH----------------MMDEDFINAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+G+DRL+M +T++ SIRDVI FP +K
Sbjct: 457 EVGMPPTGGLGIGVDRLIMFMTDAYSIRDVILFPTMK 493
>gi|350264180|ref|YP_004875487.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349597067|gb|AEP84855.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 499
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFIARSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E ++ A+E A G+E KD S +VG
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDFWEEVT-VEQAREY---AKEHGVEIKD------SMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|307276457|ref|ZP_07557580.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|306506937|gb|EFM76084.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
Length = 498
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQIMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEEAC-ALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|295106037|emb|CBL03580.1| Lysyl-tRNA synthetase (class II) [Gordonibacter pamelaeae 7-10-1-b]
Length = 660
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/532 (48%), Positives = 336/532 (63%), Gaps = 38/532 (7%)
Query: 50 SSSSTSTSDREAVR----ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE 105
S ++ +T + + V A+R K E L + G +PY + + +H L Y L +G
Sbjct: 2 SDTNDTTGNGQVVEDDPIAVRRAKREALIAAGRDPYGHAFAYSHHLADLAAQYEGLEDG- 60
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIG 165
S +D V VAGR++A+R GKLAFL LRD SG +QL+C L D F +LK +D+G
Sbjct: 61 --ASTSDEVKVAGRIMAKRDQGKLAFLELRDSSGDMQLFCRINALGEDAFAELKD-LDVG 117
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
D +GV G+M RT++G+LSV V+SF +L+KSL PLP+K+HGL D + RYRQRYVD++ PE
Sbjct: 118 DWIGVRGTMMRTKRGQLSVAVDSFELLSKSLRPLPEKFHGLADKETRYRQRYVDLVMNPE 177
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V F KR KIV+ IR+ +E G+ EVETP+L GGA ARPFVT+HN+L +D YLRIA
Sbjct: 178 VKSTFEKRFKIVAAIRRYMEDHGYYEVETPILHPILGGANARPFVTHHNALDKDFYLRIA 237
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
TELHLKR+++GGFEK++EIGR FRNEG+ HNPEFTT+E Y+A+SD + MM +T+ +V
Sbjct: 238 TELHLKRLIVGGFEKVFEIGRQFRNEGMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVVQ 297
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL 405
A+A G ++YQG ++ L WRR TM L E G D V+ T L
Sbjct: 298 AAAMAACGTTQVEYQGQQVDLGGTWRRATMIELASEGAGED---------VSFARTRDEL 348
Query: 406 GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
LE E + G L+ E+FE V E KL+QPTFV ++P+E+SPLAK L
Sbjct: 349 VAILERNGGHA-EDAWGKGKLIAEIFEAVAEEKLIQPTFVTEHPLEVSPLAKKKAGEPEL 407
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
TERFELFICG E ANAF EL DP+DQ R +QV E DD
Sbjct: 408 TERFELFICGHEYANAFGELNDPIDQAERFRKQV------------------EAKDLGDD 449
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ + DDD+V ALEYGMPPA G G+GIDRL MLLT++ SIRDV+ FP ++
Sbjct: 450 EA--MGYDDDYVRALEYGMPPAGGCGIGIDRLAMLLTDAPSIRDVLLFPHMR 499
>gi|89892965|ref|YP_516452.1| hypothetical protein DSY0219 [Desulfitobacterium hafniense Y51]
gi|219666232|ref|YP_002456667.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|423072916|ref|ZP_17061662.1| lysine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|89332413|dbj|BAE82008.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536492|gb|ACL18231.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|361856335|gb|EHL08250.1| lysine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 488
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/516 (46%), Positives = 340/516 (65%), Gaps = 45/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ +LR G+EPYA ++ RTH A ++ + + L E V +AGR++++R
Sbjct: 10 VRLDKLAQLRENGVEPYADRYQRTHMAQEILDGFDTL--------EGQEVKIAGRMMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D SG IQ Y K+ + D F+ + F DIGDI+G+ G++ RT +GE+SV
Sbjct: 62 DQGKVVFTHIQDFSGQIQAYIRKDDVGEDWFELISKF-DIGDIVGIKGTVFRTRRGEISV 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
N IL+KS+ PLP+K+HGLT+V+ RYRQRYVD+I PEV +VF R+KI+ +R +
Sbjct: 121 HANEVQILSKSMRPLPEKFHGLTNVELRYRQRYVDLIMNPEVRNVFVMRSKIIRSMRNFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GGF+K++EI
Sbjct: 181 EGQGFLEVETPTLHTIPGGAAARPFITHHNTLDMDLYLRIALELPLKRLIVGGFDKVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++++ +M +TE +++ A V+G + YQG I
Sbjct: 241 GRNFRNEGISIKHNPEFTMMELYQAYANFEDIMELTENMISAIAKEVHGTTEVTYQGQMI 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR M + E G+DF+++ D + AKE L+ +E
Sbjct: 301 DFKTPWRRLPMLEGILEYGGVDFSQIHTDEEAQQAAKEKGLK-------------VEPGS 347
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G ++NE FE VEP L+QPTFV+ +P+EISPLAK + H T+RFE F GRE+ NA
Sbjct: 348 SRGKIINEFFEEFVEPNLIQPTFVIGHPVEISPLAKRNAEHPEYTDRFEAFAYGRELGNA 407
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E QV + + + DD ++ +D+DFV ALE
Sbjct: 408 FSELNDPIDQRQRFEAQVAERD------------------KGDDEAH--MMDEDFVQALE 447
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDRLVMLLT+SASIRDVI FP ++
Sbjct: 448 YGLPPTGGLGIGIDRLVMLLTDSASIRDVILFPTMR 483
>gi|154249833|ref|YP_001410658.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
gi|171769382|sp|A7HM68.1|SYK_FERNB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|154153769|gb|ABS61001.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 509
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 347/515 (67%), Gaps = 38/515 (7%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
R RIK+++ELR+ G+ PY Y +++TH+ +++ + HL+NGE ++ VS AGR+++
Sbjct: 6 REARIKEIDELRNLGINPYPYSYNKTHTTEDIKKQFEHLSNGEVTDK---RVSTAGRIMS 62
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
R GK AF ++D G IQ Y K++ ++ ++ K V +GDI+GV G + ++ GE+
Sbjct: 63 IREHGKSAFFHIKDTYGRIQAYIRKDK--TENYEFFKERVTVGDIVGVEGIVFKSNTGEI 120
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++LV F +L K L P+P+K+HG+ D + YRQRYVDMI+ E FR R+ I+ IR+
Sbjct: 121 TILVEKFELLVKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDETIKRFRMRSDIIRMIRE 180
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+ GF EVETP+LQ GGA ARPF+T+ N+L D+YLRIATELHLKR ++GGF+K+Y
Sbjct: 181 FLTKKGFFEVETPILQYLTGGASARPFITHLNALDIDMYLRIATELHLKRFIVGGFDKVY 240
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIG+IFRNEG+S +H+PEFT+IE+Y+AY+DY+ MMN+TEE++T+ + G I YQG
Sbjct: 241 EIGKIFRNEGISYKHHPEFTSIELYQAYADYEDMMNLTEELITYLVEQLYGTTKITYQGQ 300
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI RPWRR M + +KE G+D ++ + ET + L EN + I
Sbjct: 301 EIDFTRPWRRVKMRDFIKENLGVDI------IEDSDETMAKVLA---ENGVEVDINDR-- 349
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++ +++++ VE K++QPTF+L++P+EISPLAK HR +TERFEL I GREMANAF
Sbjct: 350 -GHMIEKLWDL-VEDKVIQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAF 407
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ R Q+R L++ D ++ LD DFV ALEY
Sbjct: 408 SELNDPVDQLERFMNQLR-------------------LRDLGDQEAQM-LDKDFVRALEY 447
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+SA+IRDVIAFP+++
Sbjct: 448 GMPPTGGLGIGIDRLVMLLTDSANIRDVIAFPLVR 482
>gi|11387152|sp|Q9RHV9.1|SYK_GEOSE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|6681368|dbj|BAA88691.1| lysyl-tRNA synthetase [Geobacillus stearothermophilus]
Length = 494
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/526 (45%), Positives = 351/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE +
Sbjct: 2 SHEELNDQLRVRREKLKKIEEL---GVDPFGKRFERTHKAEELFELYGDLSK-EELEEQQ 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV
Sbjct: 58 IEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDLGDIVGVR 116
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE F
Sbjct: 117 GTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFI 176
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 177 TRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLK 236
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V
Sbjct: 237 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEV 296
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE G+DF +D +E A G+E
Sbjct: 297 LGTTKIQYGEHLVDLTPEWRRLHMVDAIKEYVGVDFWRQMSD----EEARELAKEHGVE- 351
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ + G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFEL
Sbjct: 352 -----VAPHMTFGHIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFEL 406
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R EEQ+++ ++ +D ++E
Sbjct: 407 FIVGREHANAFTELNDPIDQRQRFEEQLKER------------------EQGNDEAHE-- 446
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 447 MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|296329584|ref|ZP_06872070.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672781|ref|YP_003864452.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153327|gb|EFG94190.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411024|gb|ADM36142.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 499
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFIARSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E ++ A+E A G+E KD S +VG
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDFWEEVT-VEQAREY---AKEHGIEIKD------SMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|260880904|ref|ZP_05403101.2| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
gi|260849879|gb|EEX69886.1| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
Length = 506
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/532 (46%), Positives = 346/532 (65%), Gaps = 35/532 (6%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE 105
+++ D + +R +K+EE R+ G+ P+ +++D T A ++E Y HL
Sbjct: 6 DKKQKGQQAPVEDLNEMMKVRREKMEEFRAMGVPPFGHRYDVTDYAEPIKEKYAHL---- 61
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIG 165
E + E V +AGR++A R GK +F TL D +G IQ+Y + + L D++ +DIG
Sbjct: 62 EGDEEGGEVRIAGRLMAIRGHGKASFCTLNDRTGNIQVYFKIDVLGEDKYKNQFKKLDIG 121
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
DI+G+ G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D+I PE
Sbjct: 122 DIVGIRGIVFKTHRGEVTVRVEDFDLLSKSLRPLPEKFHGLQDVDIRYRQRYLDLIMNPE 181
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V + FRKR KI+ IR +++ ++EVETPVL AGGA ARPFVT+HN+L DLYLRIA
Sbjct: 182 VRETFRKRTKIIQSIRSYLDTRDYLEVETPVLSTIAGGAAARPFVTHHNALDIDLYLRIA 241
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
TEL+LKR++IGGF+++YE+GR+FRNEG+ RHNPEFTTIE Y+AY+DY MM+ITE IV
Sbjct: 242 TELNLKRLVIGGFDRVYEMGRVFRNEGMDVRHNPEFTTIEFYQAYADYTDMMDITEGIVV 301
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL 405
+ A +V G I+YQGVEI L + +R +M++ VKEATG DF L R +
Sbjct: 302 NAAKSVLGTPVINYQGVEIDLSK-VKRISMNDAVKEATGKDF------LSCETVEEARKM 354
Query: 406 GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
D + E +G +LN+ FE VE L+QPTF+ +P EISPLAK + +
Sbjct: 355 ADEI----GVPYEQRHGIGGILNQAFEEKVEETLMQPTFITGHPTEISPLAKRNPEDPRI 410
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
T+RFE FI GRE+AN F+EL DP+DQ R +Q++Q + DD
Sbjct: 411 TDRFEFFIYGRELANGFTELNDPIDQEGRFLDQLKQR------------------EAGDD 452
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ +D D++TA+EYG+PP G+G+GIDRLVMLLT++ SIRDV+ FP +K
Sbjct: 453 EAH--VMDRDYITAMEYGLPPTGGVGIGIDRLVMLLTDAPSIRDVLLFPTMK 502
>gi|254220959|pdb|3E9H|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysylsulfamoyl Adenosine
gi|254220960|pdb|3E9H|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysylsulfamoyl Adenosine
gi|254220961|pdb|3E9H|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysylsulfamoyl Adenosine
gi|254220962|pdb|3E9H|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysylsulfamoyl Adenosine
gi|254220963|pdb|3E9I|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysine Hydroxamate-Amp
gi|254220964|pdb|3E9I|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysine Hydroxamate-Amp
gi|254220965|pdb|3E9I|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysine Hydroxamate-Amp
gi|254220966|pdb|3E9I|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With L-Lysine Hydroxamate-Amp
gi|307568117|pdb|3A74|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With Diadenosine Tetraphosphate (Ap4a)
gi|307568118|pdb|3A74|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With Diadenosine Tetraphosphate (Ap4a)
gi|307568119|pdb|3A74|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With Diadenosine Tetraphosphate (Ap4a)
gi|307568120|pdb|3A74|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
Complexed With Diadenosine Tetraphosphate (Ap4a)
Length = 493
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/526 (45%), Positives = 351/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE +
Sbjct: 1 SHEELNDQLRVRREKLKKIEEL---GVDPFGKRFERTHKAEELFELYGDLSK-EELEEQQ 56
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV
Sbjct: 57 IEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDLGDIVGVR 115
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE F
Sbjct: 116 GTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFI 175
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 176 TRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLK 235
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V
Sbjct: 236 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEV 295
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE G+DF +D +E A G+E
Sbjct: 296 LGTTKIQYGEHLVDLTPEWRRLHMVDAIKEYVGVDFWRQMSD----EEARELAKEHGVE- 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ + G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFEL
Sbjct: 351 -----VAPHMTFGHIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFEL 405
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R EEQ+++ ++ +D ++E
Sbjct: 406 FIVGREHANAFTELNDPIDQRQRFEEQLKER------------------EQGNDEAHE-- 445
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 446 MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 491
>gi|152973925|ref|YP_001373442.1| lysyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|189082695|sp|A7GJY9.1|SYK_BACCN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|152022677|gb|ABS20447.1| lysyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 499
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RTHS+ +L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTHSSKELLNLYGEFSK-EELEEKAISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTKSL PLPDKYHGL D+++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATSFTLLTKSLRPLPDKYHGLKDIEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHTIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEHEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ G+DF K RAL + I+ + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYCGVDF------WKPMSVEEARALA----KEHDVEIKDTMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNDEDSRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMRHKQ 498
>gi|410656938|ref|YP_006909309.1| Lysyl-tRNA synthetase (class II) [Dehalobacter sp. DCA]
gi|410659976|ref|YP_006912347.1| Lysyl-tRNA synthetase (class II) [Dehalobacter sp. CF]
gi|409019293|gb|AFV01324.1| Lysyl-tRNA synthetase (class II) [Dehalobacter sp. DCA]
gi|409022332|gb|AFV04362.1| Lysyl-tRNA synthetase (class II) [Dehalobacter sp. CF]
Length = 489
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 344/513 (67%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K++ LR+KG+EPYA + RTH + + E + L E VS AGR++++R
Sbjct: 12 IRLDKLDNLRAKGIEPYADHYLRTHLSQGIIENFDEL--------EGQDVSAAGRIMSKR 63
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F+ ++D G IQ+Y + + FD +K F DIGDI+GV GS+ RT++GE+S+
Sbjct: 64 DQGKVLFVHIQDLQGKIQIYIRVDAFGEEMFDTIKTF-DIGDIIGVRGSVFRTKRGEISI 122
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+KSL PLP+K+HGLT+VD RYRQRY+D+I EV + F R KI+ +R+ +
Sbjct: 123 KAEDITLLSKSLRPLPEKFHGLTNVDIRYRQRYLDLIMNAEVKETFITRNKIIRTMREYL 182
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP L AGGA A+PF+T+HN+L LY+RIA EL LKR+++GGFEK++EI
Sbjct: 183 EEKGFLEVETPTLLPIAGGATAKPFITHHNALDMQLYMRIALELPLKRLIVGGFEKVFEI 242
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++Y+ +MN+TE+++ + V + YQG +I
Sbjct: 243 GRNFRNEGISIKHNPEFTMMELYQAYANYEDIMNLTEDMIVYIVEKVLHTQEVTYQGEKI 302
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+PWRR M + +KE GIDF + ++ +E A+ GL+ I + + G
Sbjct: 303 NFAKPWRRLPMLDAIKEYAGIDFAQ----IETEEEARKVAMEKGLQ------INAQETKG 352
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++NEVFE VEPKL+QPTF++ +P+EISPLAK + + T+RFE+FI GRE NAFSE
Sbjct: 353 KIINEVFEEFVEPKLIQPTFIIGHPVEISPLAKRNAENPEYTDRFEVFIYGREAGNAFSE 412
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QV + ++ DD ++ +D+DF+ ALEYG+
Sbjct: 413 LNDPIDQRGRFEKQVLER------------------EKGDDEAH--MMDEDFLQALEYGL 452
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+SASIRDVI FP +K
Sbjct: 453 PPTGGLGIGIDRLVMLLTDSASIRDVILFPTMK 485
>gi|315644404|ref|ZP_07897544.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
gi|315280281|gb|EFU43573.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
Length = 503
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 344/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++R + A + + Y L+ EE + V++AGR++A+R
Sbjct: 20 IRRNKLDELRKLGIDPFGGKYERENHAGDILKEYDGLSK-EELEEKQVEVNLAGRIMAKR 78
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG +Q+Y ++ + Q++ + +D+GDI+GV G + +T+ GE +V
Sbjct: 79 GMGKASFAHIQDLSGRVQIYVRQDSVAEAQYEAFSI-LDLGDIIGVKGVLFKTKTGETTV 137
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+K+HGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 138 KVKELEVLSKSLYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYL 197
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 198 DSLGYLEVETPTLHSIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 257
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I YQG E+
Sbjct: 258 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEV 317
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE G+DF ++++ E R L + K +E + G
Sbjct: 318 DLTPQWRRVSMVDAVKEIVGVDFG-----VEMSNEEAHR-----LAKEHKVPVEPHMTFG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV +P+EISPLAK + T+RFELFI RE ANAFSE
Sbjct: 368 HILNAFFEQFVEETLIQPTFVTGHPVEISPLAKKNDVDPRFTDRFELFIVAREHANAFSE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 428 LNDPIDQRQRFEAQMKEK------------------EQGNDEAHE--MDEDFLRALEYGM 467
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTN+ SIRDV+ FP ++
Sbjct: 468 PPTGGLGIGIDRLIMLLTNAPSIRDVLLFPHMR 500
>gi|430756386|ref|YP_007211177.1| Lysyl-tRNA synthetase LysRS [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430020906|gb|AGA21512.1| Lysyl-tRNA synthetase LysRS [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 502
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 20 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 78
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 79 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 137
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 138 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 197
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 198 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 257
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 258 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 317
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E ++ A+E A G+E KD S +VG
Sbjct: 318 DLKPEWKRIHMVDAVKEATGVDFWEEVT-VEQAREY---AKEHGVEIKD------SMTVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 368 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 428 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 467
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 468 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 500
>gi|308171972|ref|YP_003918677.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|384157695|ref|YP_005539768.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
gi|384162488|ref|YP_005543867.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
gi|384166710|ref|YP_005548088.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
gi|307604836|emb|CBI41207.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|328551783|gb|AEB22275.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
gi|328910043|gb|AEB61639.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
gi|341825989|gb|AEK87240.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
Length = 499
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ + Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAIE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARSHAKEHGIE------ITNSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|408355454|ref|YP_006843985.1| lysyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
gi|407726225|dbj|BAM46223.1| lysyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
Length = 493
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/513 (47%), Positives = 344/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ ++ +KG++P+ K++RTH AN+L E Y L+ E + V++AGR++ +R
Sbjct: 11 VRRNKMNDMLAKGIDPFGDKFERTHMANELVEQYNELSKEELEEKAVN-VTIAGRIMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D SG IQ+Y K+ + D ++ D+GDI+GVSG + +T GELSV
Sbjct: 70 GKGKVGFSHIQDFSGQIQIYVRKDEIGEDAYELFNT-ADLGDIIGVSGELFKTNVGELSV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF +LTKSL PLP+K+HGL DV++RYRQRY+D+I+ + + F R+KI+ +R+ +
Sbjct: 129 KVTSFTMLTKSLRPLPEKFHGLKDVEQRYRQRYLDLITNHDSKETFIMRSKIIQSMRRYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP++ GGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG E++YEI
Sbjct: 189 DNAGFLEVETPMMHNIPGGASARPFITHHNTLDIDLYMRIAIELHLKRLVVGGMERVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+Y+AY+DY+ +M++ E +V H A V G T+ Y I
Sbjct: 249 GRVFRNEGVSTRHNPEFTMIELYQAYADYEDIMSLVENMVAHIAEEVTGSTTVQYGDDMI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M +++KE TG+DF D + RAL K I + G
Sbjct: 309 ELKPGWKRVHMVDIIKEFTGVDFWPKMTDDEA------RALA----KKHNVEINEMMTFG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTFV +P+EISPLAK ++ T+RFELFI RE ANAFSE
Sbjct: 359 HIVNEFFEQKVEEHLVQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVRREHANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 419 LNDPIDQRQRFEAQVKER------------------EQGNDEAHE--MDEDFLEALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP +K
Sbjct: 459 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMK 491
>gi|154684600|ref|YP_001419761.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
gi|394994216|ref|ZP_10386944.1| lysyl-tRNA synthetase [Bacillus sp. 916]
gi|429503616|ref|YP_007184800.1| lysyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|154350451|gb|ABS72530.1| LysS [Bacillus amyloliquefaciens FZB42]
gi|393804992|gb|EJD66383.1| lysyl-tRNA synthetase [Bacillus sp. 916]
gi|429485206|gb|AFZ89130.1| lysyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 499
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ + Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAVE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARGHAKEHGIE------ITNSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|344996190|ref|YP_004798533.1| Lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964409|gb|AEM73556.1| Lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 497
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/516 (48%), Positives = 342/516 (66%), Gaps = 45/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RIKK++EL+ PY K+D TH + ++E + E V VAGR++++R
Sbjct: 20 RIKKLKELQQNKYNPYEKVKYDPTHYSTDIKENFEVF--------EGKFVCVAGRMLSKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ + D G IQ+Y + + + +++++ K + DIGDI+GV G + +T KGE+SV
Sbjct: 72 GHGKASFVDILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK L PLP+K+HGL D+D RYR+RY+D+I P+V D F KR+ I+ IRK +
Sbjct: 132 KAKEIEMLTKCLRPLPEKWHGLRDIDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIATELHLKR+++GGF+K+YE+
Sbjct: 192 DDRGFLEVETPVLSPVAGGAAARPFITHHNALDIDLYLRIATELHLKRLIVGGFDKVYEL 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S +HNPEFTTIE+Y+AY+DY+ MM +TE+++T A V G L I YQ EI
Sbjct: 252 GRVFRNEGISIKHNPEFTTIEIYQAYADYKEMMELTEKLITTVAQEVLGTLKITYQRQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L PW+R TM +K+ G+DF L K+AK+ G+E +E +
Sbjct: 312 DLTPPWQRLTMVEAIKKYVGVDFENVTSLDEARKIAKDL-------GIE------VEENW 358
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NEVFE VE LVQPTF++DYP+E+SPLAK + + TERFELFI RE+ANA
Sbjct: 359 QVGHIINEVFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANA 418
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQ+ R EQ+++ A H +D+DF+ ALE
Sbjct: 419 FSELNDPFDQKERFLEQLKERQRGNQEA----------------H----MMDEDFIEALE 458
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494
>gi|323451918|gb|EGB07794.1| hypothetical protein AURANDRAFT_59065 [Aureococcus anophagefferens]
Length = 485
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/513 (50%), Positives = 343/513 (66%), Gaps = 39/513 (7%)
Query: 73 LRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGK-LAF 131
+R+ G+EP+AY ++ +HSA Q + L NG E E VSV GR++A+R FGK LAF
Sbjct: 1 MRAAGVEPFAYGFEASHSAAAAQAEWAGLENGAED--EGARVSVCGRLMAKRVFGKKLAF 58
Query: 132 LTLRDDSGTIQLYCEKERL---LSD----QFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
LRD +G IQL+ EK+R+ L D F L + D GD++G SG++KRT+KGELSV
Sbjct: 59 FGLRDATGEIQLFLEKKRVNGGLGDGDPKTFKNLLEWTDGGDVVGASGTVKRTDKGELSV 118
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ + +LTK+L PLPDK+ GL DV RYR+R +D+I+ P+V F RAKI S IR+ +
Sbjct: 119 YVDDWTMLTKALAPLPDKHKGLVDVQTRYRRRELDLIANPDVRRTFELRAKITSGIRRFL 178
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+E+ETP L GGAEA+PF T HN+L DL LRIATELHLKR+++GGF+++YE+
Sbjct: 179 DDRGFLEIETPTLHSQPGGAEAKPFETKHNALDLDLTLRIATELHLKRLVVGGFDRVYEL 238
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE +V A + G + Y I
Sbjct: 239 GRIFRNEGVSTRHNPEFTSVELYQAYADYDDMMVLTETLVESLAENLVGTTQLPYADETI 298
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PWRR TM +V++A G+DF L D + + L +K + ++G
Sbjct: 299 DVSAPWRRVTMSEVVRDA-GVDFEGLDLD-EAKAAAKAAGVPAALADKQE-------TLG 349
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
LLN FE + E L QPTFV DYP+EISPLAKPHR GL ERFELF GRE+ANA+SE
Sbjct: 350 YLLNCCFEELCEASLRQPTFVTDYPVEISPLAKPHRSKPGLVERFELFCVGRELANAYSE 409
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
LTDP+DQRAR E Q K+AA DD + V D+DF+ A+E+G+
Sbjct: 410 LTDPVDQRARFEAQA----AKKAAG--------------DDEACGV--DEDFLAAVEHGL 449
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDVIAFP+LK
Sbjct: 450 PPTGGLGIGIDRLVMLLTNAPSIRDVIAFPLLK 482
>gi|424671686|ref|ZP_18108677.1| lysine--tRNA ligase [Enterococcus faecalis 599]
gi|402357954|gb|EJU92642.1| lysine--tRNA ligase [Enterococcus faecalis 599]
Length = 498
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMNLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|212637922|ref|YP_002314442.1| lysyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|212559402|gb|ACJ32457.1| Lysyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1]
Length = 494
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 345/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ +LR KG++P+ +++RTH A +L +Y HL+ EE + HVS+AGR++ +R
Sbjct: 12 VRREKLHKLREKGIDPFGKRFERTHQAEELFTLYGHLSK-EELEEKQIHVSIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y K+ + +Q++ D+GDI+GV G++ +T+ GELS+
Sbjct: 71 GKGKAGFAHIQDLTGQIQIYVRKDDVGEEQYEIFDT-SDLGDIVGVQGTVFKTKVGELSI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+S+ +LTKSL PLP+KYHGL D+++RYRQRY+D+I PE F R+ I+ +R+ +
Sbjct: 130 KVHSYEMLTKSLRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DQKGYLEVETPMMHSIAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+DY +M +TE+++ H A V G I Y E+
Sbjct: 250 GRVFRNEGISTRHNPEFTMLELYEAYADYTDIMRLTEDMIAHIAQEVLGTTKIQYGEHEV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + +K+ G+DF + +D +E A G+E + + G
Sbjct: 310 DLTPSWKRLHMVDAIKDYVGVDFWKHMSD----EEARQLAKEHGVE------VAPHMTFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 360 HIVNEFFEQKVEQHLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVAREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+R+ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 420 LNDPIDQRERFEAQLREK------------------EQGNDEAHE--MDEDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|384512176|ref|YP_005707269.1| lysine--tRNA ligase [Enterococcus faecalis OG1RF]
gi|430362603|ref|ZP_19427147.1| lysyl-tRNA synthetase [Enterococcus faecalis OG1X]
gi|430368652|ref|ZP_19428333.1| lysyl-tRNA synthetase [Enterococcus faecalis M7]
gi|327534065|gb|AEA92899.1| lysine--tRNA ligase [Enterococcus faecalis OG1RF]
gi|429512117|gb|ELA01736.1| lysyl-tRNA synthetase [Enterococcus faecalis OG1X]
gi|429516096|gb|ELA05591.1| lysyl-tRNA synthetase [Enterococcus faecalis M7]
Length = 498
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 340/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNATEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|384263712|ref|YP_005419419.1| lysyl-tRNA synthetase LysS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452854145|ref|YP_007495828.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|380497065|emb|CCG48103.1| lysyl-tRNA synthetase LysS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452078405|emb|CCP20155.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 499
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ + Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAIE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARGHAKEHGIE------ITNSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|375306242|ref|ZP_09771542.1| lysyl-tRNA synthetase [Paenibacillus sp. Aloe-11]
gi|375081753|gb|EHS59961.1| lysyl-tRNA synthetase [Paenibacillus sp. Aloe-11]
Length = 506
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/536 (45%), Positives = 350/536 (65%), Gaps = 45/536 (8%)
Query: 50 SSSSTSTSDREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEE 106
+++ S +RE + L R K++ELRS G++P+ K+ RT A L Y L E
Sbjct: 5 TTNQESQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTKEEL 64
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
+ VS+AGR++A+R GK +F ++D SG IQ+Y ++ + +Q+ + +D+GD
Sbjct: 65 EEKNLE-VSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDSVPEEQYKAFSI-LDLGD 122
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+G+ G + +T+ GE ++ V+L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV
Sbjct: 123 IVGIKGVLFKTKTGETTIKALDIVVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEV 182
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
F R++I+ +R+ ++SLG++EVETP L AGGA A+PF+T+HN+L LY+RIA
Sbjct: 183 QKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLYMRIAI 242
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YEIGR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNPEFTMIELYEAYADYKDIMQLTENMVAH 302
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFN-ELGND--LKVAKETTLR 403
A V G I YQG E+ L WRR +M + VKE TG+DF L N+ ++AKE ++
Sbjct: 303 IAQEVLGTQHIQYQGHEVDLTPQWRRVSMVDAVKEVTGVDFGAHLSNEEAHRLAKEHNVK 362
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+E + G++LN FE VE L+QPTF+ +P+EISPLAK + +
Sbjct: 363 -------------VEPHMTFGHILNAFFEEFVEETLIQPTFITGHPVEISPLAKRNEQDP 409
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLK 521
T+RFELF+ RE ANAF+EL DP+DQR R E Q+ R+H
Sbjct: 410 RFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREH------------------- 450
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D ++E +DDDF+ ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 451 -GNDEAHE--MDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|188584759|ref|YP_001916304.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349446|gb|ACB83716.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 489
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/516 (46%), Positives = 339/516 (65%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K ++ ++ ++P+ K+ T+ A ++++ Y L +E VS++GR++A+R
Sbjct: 10 VRYEKARDMENRNIQPFGDKYSATYYAQEVKDNYEQLLETKEE------VSLSGRIMAKR 63
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG +Q+Y + + + ++ K +DIGDI+ + G + T KGE++V
Sbjct: 64 GHGKAGFAHIQDSSGQVQIYTRVDNVGEEDYELYKE-LDIGDIIALKGPVFMTRKGEITV 122
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F + +KSL PLP+K+HGL DVD RYR+RY+D+I +V D F R+KI+ E+R+ +
Sbjct: 123 EVKEFHLQSKSLRPLPEKWHGLKDVDLRYRKRYLDLIMNQDVKDTFVIRSKIIREMRRYL 182
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF E+ETP L GGA ARPF TYHN+L LY+RIATELHLKR+++GGF+K+YE+
Sbjct: 183 DDRGFFEMETPTLHTIPGGANARPFKTYHNALEMKLYMRIATELHLKRLIVGGFDKVYEL 242
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ST+HNPEFT+IE+Y++ SDY MM +TE ++ A + G ++YQG I
Sbjct: 243 GRIFRNEGISTKHNPEFTSIELYQSNSDYHDMMELTENMIYEIANKIFGTPVVEYQGTNI 302
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
PW R+TM + VKEATGIDF+EL ++ A+E +A G+E +E + G
Sbjct: 303 DFTPPWPRKTMIDAVKEATGIDFSELNHE--KAREKAEQA---GIE------VEKDATWG 351
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
LNE+FE VE LVQPTF+LDYP+E+SPLAK H + LT RFE F+ G E+ANAF+E
Sbjct: 352 EALNEIFEEKVEDSLVQPTFILDYPVEVSPLAKRHEEDSRLTYRFEGFLWGSEIANAFTE 411
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP DQR R E QV EKR A E +D+DFV ALEYGM
Sbjct: 412 LNDPRDQRERFESQV----EKRDAGDEEAH----------------MMDEDFVEALEYGM 451
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVM +TNS SIRDVI FP ++ +Q
Sbjct: 452 PPTGGLGIGIDRLVMFMTNSTSIRDVILFPTMRPKQ 487
>gi|387896609|ref|YP_006326905.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens Y2]
gi|387170719|gb|AFJ60180.1| lysyl-tRNA synthetase, class II [Bacillus amyloliquefaciens Y2]
Length = 509
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ + Y+ L+ E + V++AGR++ +R
Sbjct: 27 VRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAIE-VTIAGRMMTKR 85
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 86 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 144
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 145 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 204
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 205 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 264
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 265 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 324
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 325 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARGHAKEHGIE------ITNSMTVG 374
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 375 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 434
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 435 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 474
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 475 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 507
>gi|311070729|ref|YP_003975652.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|419823402|ref|ZP_14346952.1| lysyl-tRNA ligase [Bacillus atrophaeus C89]
gi|310871246|gb|ADP34721.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|388472445|gb|EIM09218.1| lysyl-tRNA ligase [Bacillus atrophaeus C89]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 344/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ ++DR+H + Q+ Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGKRYDRSHQSEQIIAAYQELSKEELEEKAIE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDEQYEIFKT-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ + F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKNTFIARSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DYQ +M++TE ++ H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYQDIMSLTENLIAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V + A G+E I S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEVTVEQARDY-AKEHGVE------ITKSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|385267109|ref|ZP_10045196.1| lysyl-tRNA synthetase [Bacillus sp. 5B6]
gi|385151605|gb|EIF15542.1| lysyl-tRNA synthetase [Bacillus sp. 5B6]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 346/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ + Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAIE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARGHAKEHGVE------ITNSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|407475960|ref|YP_006789837.1| lysyl-tRNA synthetase [Exiguobacterium antarcticum B7]
gi|407060039|gb|AFS69229.1| Lysyl-tRNA synthetase [Exiguobacterium antarcticum B7]
Length = 497
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/516 (47%), Positives = 343/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ +R +GL+P+ +++R+ ++ Y E + + D V++AGRV+ R
Sbjct: 13 VRLGKMNAMREQGLDPFGARFERSTDTASIRAAYGEHEKEELAELKPD-VAIAGRVMTTR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQLY K+ + + ++ K D+GDI+G+SG + +T GELSV
Sbjct: 72 RKGKVGFTNVQDVKGQIQLYVRKDDVGEEAYEIYKT-CDLGDIVGISGYVFKTNVGELSV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I+ E + F R+K++ IR+ +
Sbjct: 131 HVTSFTLLTKALRPLPDKYHGLKDVEQRYRQRYLDLITNNESRETFIARSKVIRGIRQYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLG++EVETP+L AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DSLGYLEVETPMLHTIAGGASARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +MN+TE ++ H A V G + Y I
Sbjct: 251 GRVFRNEGISTRHNPEFTMIELYEAYADYNDIMNLTENLIAHVAQEVLGTTQVTYGEDVI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M +LVKEATG+DF E ++ KE L ++ +++ + G
Sbjct: 311 DLSVGWKRAHMADLVKEATGVDFFE-----EITKERAHE-----LAHEHGVEVQAHMTTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE +E LVQPTFV +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 361 HILNEFFEQKIEESLVQPTFVYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ EK A +D ++E +D+DF+ ALEYGM
Sbjct: 421 LNDPIDQRERFEAQLV---EKEAG---------------NDEAHE--MDNDFIEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ QQ
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMRHQQ 496
>gi|390457114|ref|ZP_10242642.1| lysyl-tRNA ligase [Paenibacillus peoriae KCTC 3763]
Length = 506
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/536 (45%), Positives = 350/536 (65%), Gaps = 45/536 (8%)
Query: 50 SSSSTSTSDREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEE 106
+++ S +RE + L R K++ELRS G++P+ K+ RT A L Y L E
Sbjct: 5 TTNQESQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTKEEL 64
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
+ VS+AGR++A+R GK +F ++D SG IQ+Y ++ + +Q+ + +D+GD
Sbjct: 65 EEKNLE-VSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDSVPEEQYKAFSI-LDLGD 122
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+G+ G + +T+ GE ++ V+L+KSL PLP+KYHGL DV+ RYRQRYVD++ PEV
Sbjct: 123 IVGIKGVLFKTKTGETTIKALDIVVLSKSLYPLPEKYHGLKDVELRYRQRYVDLVMNPEV 182
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
F R++I+ +R+ ++SLG++EVETP L AGGA A+PF+T+HN+L LY+RIA
Sbjct: 183 QKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLYMRIAI 242
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YEIGR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNPEFTMIELYEAYADYKDIMQLTENMVAH 302
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFN-ELGND--LKVAKETTLR 403
A V G I YQG E+ L WRR +M + VKE TG+DF L N+ ++AKE ++
Sbjct: 303 IAQEVLGTQRIQYQGHEVDLTPQWRRVSMVDAVKEVTGVDFGAHLSNEEAHRLAKEHNVK 362
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+E + G++LN FE VE L+QPTF+ +P+EISPLAK + +
Sbjct: 363 -------------VEPHMTFGHILNAFFEEFVEETLIQPTFITGHPVEISPLAKRNEQDP 409
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQV--RQHNEKRAAAVSEKSSAQEKLK 521
T+RFELF+ RE ANAF+EL DP+DQR R E Q+ R+H
Sbjct: 410 RFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREH------------------- 450
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D ++E +DDDF+ ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 451 -GNDEAHE--MDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMR 503
>gi|229917390|ref|YP_002886036.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|229468819|gb|ACQ70591.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 496
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/517 (47%), Positives = 347/517 (67%), Gaps = 34/517 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+ ++R +GL+P+ +++DR+ A +L E Y + +E+ +E D V++AGR++ +
Sbjct: 13 VRFEKMTDMRERGLDPFGHRFDRSAHAGELHEQYESIE--KEALAEQDVEVTLAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F ++D +G IQ+Y K + + FD K D+GDI+GV G + +T GELS
Sbjct: 71 RGKGKVFFAHIQDVTGQIQIYVRKNDVGDEPFDLFKS-SDLGDIVGVKGKLFKTNVGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +LTK+L PLPDKYHGL DV++RYRQRY+D+I+ + F R++I+SEIR
Sbjct: 130 IHVEEFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLITNQDSRQTFILRSRIISEIRNF 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ G++EVETP+L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG E++YE
Sbjct: 190 LNQKGYLEVETPMLHTIAGGAAARPFLTHHNALDMELYMRIAIELHLKRLIVGGLERVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TEE+V H A V G + Y
Sbjct: 250 IGRVFRNEGISTRHNPEFTMIELYEAYADYNDIMDLTEELVAHVAKEVLGTTDVQYGEDT 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L W+R M +LVKE TG+DF + +D +E A G+E +D +
Sbjct: 310 IHLGIGWKRAHMVDLVKEETGVDFWQQMSD----EEARALAKEHGVEVQDHM------TF 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L+QPTFV +P+E+SPLAK + T+RFELFI RE ANAF+
Sbjct: 360 GHIVNEFFEQKVEETLLQPTFVTGHPVEVSPLAKKNETDPRFTDRFELFIVRREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ EK A +D ++E LD+DF+ ALEYG
Sbjct: 420 ELNDPIDQRERFEAQLL---EKEAG---------------NDEAHE--LDNDFLEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ QQ
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMRHQQ 496
>gi|16077150|ref|NP_387963.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
gi|221307892|ref|ZP_03589739.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
gi|221312214|ref|ZP_03594019.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221317147|ref|ZP_03598441.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321410|ref|ZP_03602704.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402774325|ref|YP_006628269.1| lysyl-tRNA synthetase [Bacillus subtilis QB928]
gi|452912456|ref|ZP_21961084.1| lysine--tRNA ligase [Bacillus subtilis MB73/2]
gi|586058|sp|P37477.1|SYK_BACSU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|467470|dbj|BAA05316.1| lysyl-tRNA thynthetase [Bacillus subtilis]
gi|2632349|emb|CAB11858.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
gi|402479511|gb|AFQ56020.1| Lysyl-tRNA synthetase [Bacillus subtilis QB928]
gi|407955773|dbj|BAM49013.1| lysyl-tRNA synthetase [Bacillus subtilis BEST7613]
gi|407963044|dbj|BAM56283.1| lysyl-tRNA synthetase [Bacillus subtilis BEST7003]
gi|452117484|gb|EME07878.1| lysine--tRNA ligase [Bacillus subtilis MB73/2]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 339/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E E T+ + + + I+ S +VG
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDFWE---------EVTVEQARE-YAKEHEVEIKDSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|42779156|ref|NP_976403.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|206977926|ref|ZP_03238813.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957653|ref|YP_002336195.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
gi|222093847|ref|YP_002527896.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
gi|229136923|ref|ZP_04265551.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|229194467|ref|ZP_04321271.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
gi|375282174|ref|YP_005102607.1| lysyl-tRNA synthetase [Bacillus cereus NC7401]
gi|384177983|ref|YP_005563745.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402554336|ref|YP_006595607.1| lysyl-tRNA ligase [Bacillus cereus FRI-35]
gi|423357779|ref|ZP_17335371.1| lysyl-tRNA synthetase [Bacillus cereus IS075]
gi|423374869|ref|ZP_17352206.1| lysyl-tRNA synthetase [Bacillus cereus AND1407]
gi|423572028|ref|ZP_17548244.1| lysyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|423572780|ref|ZP_17548899.1| lysyl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|423608098|ref|ZP_17583990.1| lysyl-tRNA synthetase [Bacillus cereus VD102]
gi|81411375|sp|Q73FD1.1|SYK_BACC1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226737092|sp|B7HPY8.1|SYK_BACC7 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|42735071|gb|AAS39011.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|206743832|gb|EDZ55252.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217064281|gb|ACJ78531.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
gi|221237894|gb|ACM10604.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
gi|228589057|gb|EEK47071.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
gi|228646588|gb|EEL02794.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|324324067|gb|ADY19327.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358350695|dbj|BAL15867.1| lysyl-tRNA synthetase [Bacillus cereus NC7401]
gi|401073960|gb|EJP82368.1| lysyl-tRNA synthetase [Bacillus cereus IS075]
gi|401093351|gb|EJQ01452.1| lysyl-tRNA synthetase [Bacillus cereus AND1407]
gi|401199162|gb|EJR06072.1| lysyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|401216704|gb|EJR23410.1| lysyl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|401238595|gb|EJR45031.1| lysyl-tRNA synthetase [Bacillus cereus VD102]
gi|401795546|gb|AFQ09405.1| lysyl-tRNA ligase [Bacillus cereus FRI-35]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|229153855|ref|ZP_04281986.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228629659|gb|EEK86355.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/518 (45%), Positives = 345/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKIFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +KE +G DF N + V A+E L + I+ +
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEDARE---------LAKEHNVEIKDTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|47570201|ref|ZP_00240855.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
gi|228983332|ref|ZP_04143546.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|47553145|gb|EAL11542.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
gi|228776446|gb|EEM24798.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKIFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|225181740|ref|ZP_03735179.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167611|gb|EEG76423.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 487
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/521 (47%), Positives = 345/521 (66%), Gaps = 42/521 (8%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S+ EAVR +K+++L+ G+EPY K+ TH A + + L + V++
Sbjct: 6 SEHEAVRR---QKMDKLKEMGIEPYGNKYPVTHYAADVIGRFDEL--------DGQSVTL 54
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++ RA GK +F L+D+SG IQ+Y + + +D ++ +DIGDI+G++G + R
Sbjct: 55 AGRLMTVRAHGKASFANLQDESGQIQIYVRLDDVGQRTYDVFEL-LDIGDIVGLTGDVFR 113
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T +GE++V V +L KSL PLP+K+HGLT+VD RYRQRY+DMI P+V F R+KI
Sbjct: 114 TRRGEVTVAVKELQLLAKSLRPLPEKWHGLTNVDMRYRQRYLDMIVNPDVKKTFVLRSKI 173
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
V EIR + S GF+EVETPV+ AGGA A+PF+T+HN+L +LYLRIATELHLKR+++G
Sbjct: 174 VQEIRNFLNSDGFLEVETPVMHTLAGGASAKPFITHHNALDMNLYLRIATELHLKRLVVG 233
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G +K+YE+GRIFRNEG+ST+HNPEFT++E+Y+A +DY+ MM +TEE++T A V G L
Sbjct: 234 GMDKVYELGRIFRNEGISTKHNPEFTSVEIYQAQADYEDMMTLTEELITTVAQKVLGTLK 293
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
+ YQ E+ L PW R TM +++ GI+F N+++ A+E A GLE
Sbjct: 294 VPYQEQELDLTSPWPRLTMVEAIEKYAGINF----NNIQTAEEAREAAKQKGLE------ 343
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
+++ S G ++NE+FE VE +L QPTF++DYPIE+SPLAK +T RFE F+
Sbjct: 344 VKAGTSRGEIMNELFEEFVEGQLFQPTFIMDYPIEVSPLAKKKADDPSMTYRFEAFMARS 403
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E+ANAF+EL DPLDQR R E+QV KR A E LD+DF
Sbjct: 404 EIANAFTELNDPLDQRERFEQQVL----KREAGDEEAH----------------MLDEDF 443
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +LEYGMPP G+G+GIDRL+M+LT+S SIRDVI FP L+
Sbjct: 444 LLSLEYGMPPTGGLGIGIDRLIMMLTDSPSIRDVILFPTLR 484
>gi|423613704|ref|ZP_17589564.1| lysyl-tRNA synthetase [Bacillus cereus VD107]
gi|401241393|gb|EJR47784.1| lysyl-tRNA synthetase [Bacillus cereus VD107]
Length = 499
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL D+++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDIEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDQEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A G+E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNTMSVEEAREL-AKEHGVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|443635024|ref|ZP_21119194.1| LysS [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345077|gb|ELS59144.1| LysS [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 499
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/513 (47%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDEQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGDEKI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E ++ A+E A G+E KD S +VG
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDFWEEVT-VEQAREY---AKEHGVEIKD------SMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|402834488|ref|ZP_10883090.1| lysine--tRNA ligase [Selenomonas sp. CM52]
gi|402278106|gb|EJU27172.1| lysine--tRNA ligase [Selenomonas sp. CM52]
Length = 511
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/513 (47%), Positives = 344/513 (67%), Gaps = 35/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+ R G+ P+ ++++ T A++L + L GEE+ SE + VS+AGR++A R
Sbjct: 21 VRREKMEKFREMGVAPFGHRYEVTRHADELLAEFASL--GEEAESETE-VSIAGRLMAIR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F L D SG IQ+Y + + L +++ + K+ +DIGDI+GV G + RT +GEL+V
Sbjct: 78 GHGKASFAVLMDLSGKIQIYFKLDVLGEEKYKEFKL-LDIGDIIGVRGVVFRTRRGELTV 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ F +L+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV D F R KI+ IR+ +
Sbjct: 137 RVDDFTLLSKSLRPLPEKFHGLKDVEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPV+ AGGA ARPFVTYHN+L LYLRIATEL+LKR+++GG E++YEI
Sbjct: 197 DERGFLEVETPVMSTIAGGAAARPFVTYHNALDMKLYLRIATELNLKRLIVGGLERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ RHNPEFT+IE+Y+AY+DY +M++TE I A V G + Y+G EI
Sbjct: 257 GRIFRNEGIDVRHNPEFTSIEIYQAYADYNDLMDVTEGICCQAAKDVLGTTALTYEGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L + RR +M++ VKEATG DF K +E RA+ D + E +G
Sbjct: 317 DLSK-IRRVSMNDAVKEATGKDF----MSAKTVEEA--RAMADAI----GVAYEEKHGIG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LNE FE VE L+QPTF+ +P EISPLAK + +T+RFE ++ GRE+AN F+E
Sbjct: 366 GILNEAFEAKVEESLIQPTFITGHPTEISPLAKRNPEDPRITDRFEFYVYGRELANGFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R EQ +Q + DD ++ +D D++TA+EYG+
Sbjct: 426 LNDPIDQKERFLEQAKQR------------------EAGDDEAH--PMDSDYITAMEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+S+SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDSSSIRDVLFFPHMR 498
>gi|121535048|ref|ZP_01666865.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121306298|gb|EAX47223.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 498
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/513 (47%), Positives = 339/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ + ++ +EPY K++ +H A + + L E V +AGR++A R
Sbjct: 21 VRREKLAAIAAQDIEPYGRKYNFSHHAADVLADFAAL--------EGQTVRLAGRIMAIR 72
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L D SG IQ+Y ++ L +D ++ +DIGDI+GV G + +T++GE+SV
Sbjct: 73 GHGKATFAHLMDMSGRIQVYFRQDVLGEAAYDFFRL-LDIGDIIGVEGVVFKTQRGEISV 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF IL KSL PLP+K+HGL DV+ RYRQRY+D+I PEV + F R++I+ +R+ +
Sbjct: 132 KATSFEILAKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNTFVLRSRIIQAMRRYL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETP++ AGGA ARPF+TYHN+L +LY+RIA EL+LKR+++GGFE++YEI
Sbjct: 192 DSKGFLEVETPMMHPIAGGAAARPFITYHNALDMNLYMRIAPELYLKRLIVGGFERVYEI 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S RHNPEFT +E+Y+AY+DYQ +M ITEEI+ AL V G I YQG EI
Sbjct: 252 GRVFRNEGISIRHNPEFTLMELYQAYADYQDIMKITEEIIAQVALDVLGTTKITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM + + +G+DF+ +K +E RA+ D L V E +G
Sbjct: 312 DLTPPWTRMTMTEAILKYSGVDFST----VKTVEEA--RAIADRL----GVVYEKKDGIG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
N+LN VFE V E L+QPTF++ +P+EISPLAK ++ + +T+RFE FI REMAN FSE
Sbjct: 362 NILNNVFEEVAEKHLIQPTFIIGHPVEISPLAKRNKDNPAITDRFEAFIFAREMANGFSE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R QV Q + DD ++ +D+D+V ALEYGM
Sbjct: 422 LNDPIDQKERFLAQVAQR------------------ESGDDEAH--MMDEDYVIALEYGM 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+S SIRDVI FP ++
Sbjct: 462 PPTGGLGIGIDRLVMLLTDSYSIRDVILFPHMR 494
>gi|218901279|ref|YP_002449113.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
gi|226737089|sp|B7JK84.1|SYK_BACC0 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|218535399|gb|ACK87797.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
Length = 499
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPKWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|30260268|ref|NP_842645.1| lysyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525330|ref|YP_016679.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183111|ref|YP_026363.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49481679|ref|YP_034430.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145139|ref|YP_081689.1| lysyl-tRNA synthetase [Bacillus cereus E33L]
gi|65317538|ref|ZP_00390497.1| COG1190: Lysyl-tRNA synthetase (class II) [Bacillus anthracis str.
A2012]
gi|118475848|ref|YP_892999.1| lysyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|165872546|ref|ZP_02217178.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635062|ref|ZP_02393379.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641503|ref|ZP_02399751.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170688911|ref|ZP_02880113.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707537|ref|ZP_02897990.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655622|ref|ZP_02936985.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190568953|ref|ZP_03021854.1| lysyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|196036416|ref|ZP_03103813.1| lysyl-tRNA synthetase [Bacillus cereus W]
gi|196041753|ref|ZP_03109043.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|196047399|ref|ZP_03114612.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862130|ref|YP_002747508.1| lysyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|227812751|ref|YP_002812760.1| lysyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|228912816|ref|ZP_04076464.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925330|ref|ZP_04088427.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931579|ref|ZP_04094486.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943883|ref|ZP_04106269.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089208|ref|ZP_04220490.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|229119739|ref|ZP_04249001.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|229182471|ref|ZP_04309723.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|229604711|ref|YP_002864729.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254682296|ref|ZP_05146157.1| lysyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254724218|ref|ZP_05186003.1| lysyl-tRNA synthetase [Bacillus anthracis str. A1055]
gi|254735479|ref|ZP_05193187.1| lysyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254744619|ref|ZP_05202298.1| lysyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
gi|254756324|ref|ZP_05208353.1| lysyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254762380|ref|ZP_05214222.1| lysyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|300119172|ref|ZP_07056873.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
gi|376264105|ref|YP_005116817.1| lysyl-tRNA synthetase [Bacillus cereus F837/76]
gi|386733944|ref|YP_006207125.1| lysyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|421510692|ref|ZP_15957581.1| lysyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|421640766|ref|ZP_16081344.1| lysyl-tRNA ligase [Bacillus anthracis str. BF1]
gi|423553989|ref|ZP_17530315.1| lysyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|39932145|sp|Q81VW3.1|SYK_BACAN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81397490|sp|Q6HPU0.1|SYK_BACHK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81689861|sp|Q63HC2.1|SYK_BACCZ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229793|sp|A0R8E9.1|SYK_BACAH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|30253589|gb|AAP24131.1| lysine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500478|gb|AAT29154.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177038|gb|AAT52414.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49333235|gb|AAT63881.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51978608|gb|AAU20158.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus cereus E33L]
gi|118415073|gb|ABK83492.1| lysine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
gi|164711674|gb|EDR17219.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510488|gb|EDR85886.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529536|gb|EDR92286.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127533|gb|EDS96407.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170667135|gb|EDT17896.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080033|gb|EDT65132.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190559877|gb|EDV13861.1| lysyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|195991046|gb|EDX55017.1| lysyl-tRNA synthetase [Bacillus cereus W]
gi|196021801|gb|EDX60495.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|196027373|gb|EDX65990.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|225790233|gb|ACO30450.1| lysine--tRNA ligase [Bacillus cereus 03BB102]
gi|227006353|gb|ACP16096.1| lysine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|228601051|gb|EEK58619.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228663764|gb|EEL19342.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228694171|gb|EEL47852.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228815840|gb|EEM62075.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228828131|gb|EEM73858.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834377|gb|EEM79917.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846876|gb|EEM91880.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229269119|gb|ACQ50756.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
gi|298723494|gb|EFI64235.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
gi|364509905|gb|AEW53304.1| Lysyl-tRNA synthetase (class II) [Bacillus cereus F837/76]
gi|384383796|gb|AFH81457.1| Lysyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|401182070|gb|EJQ89212.1| lysyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|401819313|gb|EJT18494.1| lysyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|403392145|gb|EJY89403.1| lysyl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 499
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|333896132|ref|YP_004470006.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111397|gb|AEF16334.1| Lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 506
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/517 (46%), Positives = 337/517 (65%), Gaps = 46/517 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K++ELRS G+EPY K+DRT+ + ++ Y E V++AGR++++
Sbjct: 19 VRRNKLDELRSLGIEPYGIDKFDRTNMTSDIKNDYDKF--------EGKTVTIAGRIMSK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F ++D G IQLY + + L ++ K+ +DIGDI+GV+G + +++ GE++
Sbjct: 71 RGHGKASFADIQDRDGRIQLYFKMDVLGEKNYEIFKI-LDIGDIIGVTGEVFKSKTGEVT 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +L+KSL LPDK+HGL D D RYRQRYVD+I P V + F KR I+ IR+
Sbjct: 130 IRVQDFKLLSKSLQILPDKWHGLKDPDLRYRQRYVDLIINPTVKETFIKRTAIIKAIREF 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR+++GG EK+YE
Sbjct: 190 LDSRGFIEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM+ITE + + A VNG I YQG E
Sbjct: 250 MGRVFRNEGMDIRHNPEFTLLELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIIYQGTE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I L PWRR TM + +KE IDFN++ +D +++AK L ++
Sbjct: 310 IDLTPPWRRLTMIDAIKEFLDIDFNKVSSDEEAIEIAKRHHLE-------------VKEG 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++ VF+ + E L+QPTF++DYP+EISPLAK + LT RFE FI GRE+AN
Sbjct: 357 MKKGDVIALVFDELCESHLIQPTFIIDYPVEISPLAKRKHDNPALTSRFEAFIYGREIAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R EQ++Q R A E +DDDF+ AL
Sbjct: 417 AFSELNDPIDQKERFIEQLKQ----REAGNDEAH----------------MMDDDFINAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+GIDRL+M +T++ SIRDVI FP +K
Sbjct: 457 EVGMPPTGGLGIGIDRLIMFMTDAYSIRDVILFPTMK 493
>gi|345020741|ref|ZP_08784354.1| lysyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 493
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/513 (48%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R KGL+P+ K+ RT A LQ Y E +E + V++AGRV+ +R
Sbjct: 11 VRREKLDTYREKGLDPFGGKFTRTSLATDLQAKYDQYTKEELEETEYN-VTIAGRVMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG IQLY K+ + + ++ +D+GDI+GV+G M +T GELS+
Sbjct: 70 GKGKAGFAHIQDLSGQIQLYVRKDAIGEEAYEIFNS-IDLGDIVGVTGVMFKTNVGELSI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +LTKSL PLP+KYHGL DV++RYRQRY+D+I+ + + F R+KI+ +R +
Sbjct: 129 KVTEFELLTKSLRPLPEKYHGLKDVEQRYRQRYLDLITNMDSRETFVTRSKIIRAMRNYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETP++ GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 DSNGFLEVETPMMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G T+ Y EI
Sbjct: 249 GRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMELTENMVAHIAEEVLGTTTVTYGEHEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKE TG++F E +D K A+E A G+E KD + G
Sbjct: 309 DLKPQWKRLHMVDAVKEYTGVNFWEHMSDEK-AREL---AKEHGIEIKDNM------TFG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTFV +P+EISPLAK + T+RFELFI RE ANAFSE
Sbjct: 359 HVVNEFFEQKVEEKLIQPTFVYGHPVEISPLAKKNEEDERFTDRFELFIVAREHANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ +E +D ++ +D+DF+ ALEYGM
Sbjct: 419 LNDPIDQRERFEAQVKER------------------EEGNDEAH--LMDEDFLEALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 459 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 491
>gi|374850779|dbj|BAL53759.1| lysyl-tRNA synthetase [uncultured candidate division OP1 bacterium]
gi|374856604|dbj|BAL59457.1| lysyl-tRNA synthetase [uncultured candidate division OP1 bacterium]
Length = 493
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/516 (48%), Positives = 338/516 (65%), Gaps = 34/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K+ + R +G++PY ++ RTH A +L +I+ L G +S+S HV VAGR+
Sbjct: 7 LREERLRKLTQWRQRGIDPYPTRFLRTHLAEELHKIFHDLPPGSDSSS---HVRVAGRIT 63
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
A+R G +FL LRD SG IQL+ + LL D+ +L +DIGD LGV G + RT+KGE
Sbjct: 64 AKRVMGGASFLDLRDGSGRIQLHGTAD-LLGDERYELFTQLDIGDFLGVEGLVFRTKKGE 122
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V F++L K+L PLP+K+HGL DV+ RYRQRY+D+I+ + R++IVS +R
Sbjct: 123 LSVRVEEFMLLAKALRPLPEKWHGLQDVEIRYRQRYLDLIANEHARKIAITRSRIVSAMR 182
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++S GF+EVETP+LQ GGA A+PF TYHN+L LYLRI+ EL+LKR++IGG EK+
Sbjct: 183 RFLDSEGFLEVETPILQPLYGGAAAKPFTTYHNALNMTLYLRISDELYLKRLIIGGLEKV 242
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIG+ FRNEG+ST+HNPEFT +E Y AY+DY MM +TE +++H A V G I YQG
Sbjct: 243 YEIGKDFRNEGISTKHNPEFTQMECYWAYADYYDMMALTERMISHIATEVLGSTKICYQG 302
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L PW+R T + TGID + + TL L D + + K ++ P
Sbjct: 303 HEIDLTPPWQRITFREAILAYTGID---------IERYPTLSELRDAI-ARHKLSLDPQP 352
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G ++E+ + VEPKL+QPTFVLDYPIE+SPLAK + L ERFE FI E NA
Sbjct: 353 TWGKQVDELLKTYVEPKLIQPTFVLDYPIELSPLAKRKSDNPRLVERFEPFIGAMEFGNA 412
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR E+ AQE L + D + LD+DF+TALE
Sbjct: 413 FSELNDPIDQR-------------------ERFLAQEALHRAGDEETQ-PLDEDFLTALE 452
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRL M+LT++ SIR+VI FP L+
Sbjct: 453 YGMPPTGGLGIGIDRLTMILTDAPSIREVILFPTLR 488
>gi|297582413|ref|YP_003698193.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140870|gb|ADH97627.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 503
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ L G++P+ K++R+H A L + Y + E ++ + V++ GR++ +R
Sbjct: 13 VRREKLQNLLDLGMDPFGSKFERSHMAQPLHDDYEEVEKDELADKDIK-VTLGGRIMTKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y K+++ D+ +L DIGDI+GVSG + +T+ GELS+
Sbjct: 72 GKGKAGFAHVQDLTGQIQIYVRKDQV-GDEAYELFTKTDIGDIVGVSGVLFKTKVGELSI 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+SF +LTKSL PLPDKYHGL DV++RYRQRY+D+I PEV D F R+KI+ +R+ +
Sbjct: 131 KVSSFEMLTKSLRPLPDKYHGLKDVEQRYRQRYLDLIVNPEVRDTFVLRSKILQSMRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ GGA A+PF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DDHGYLEVETPMMHAIPGGASAKPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE ++ H A V G + Y EI
Sbjct: 251 GRVFRNEGVSTRHNPEFTMIELYEAYADYHDVMALTENLIAHIAQDVLGTTKVHYGDSEI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE WRR M + +KE TG+DF + D +E A G+ +KD G
Sbjct: 311 DLEPKWRRLHMVDAIKEETGVDFWQEMTD----EEARDLAKKHGVPHKDTM------KFG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E KL++PTFV +P++ISPLAK + T+RFELFI GRE ANAFSE
Sbjct: 361 HIVNEFFEHFIEEKLIEPTFVYGHPLDISPLAKKNDEDPRFTDRFELFIVGREHANAFSE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQRAR E Q+ + ++ DD ++ +D+DFV +LEYG+
Sbjct: 421 LNDPVDQRARFEAQLLER------------------EQGDDEAH--MMDEDFVESLEYGL 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++ Q
Sbjct: 461 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRNSQ 496
>gi|169830349|ref|YP_001716331.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169637193|gb|ACA58699.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 490
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/525 (47%), Positives = 344/525 (65%), Gaps = 42/525 (8%)
Query: 55 STSDREAVRALRIK--KVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
S D+E LR++ K+ +L+++G+ PY +++RTH A + + Y L E
Sbjct: 2 SDHDQELHELLRVRREKLLQLQAQGVPPYGGRYERTHLAAVVVDDYARL--------EGR 53
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
+S+AGR++A+R GK AF L+D SG +Q Y L ++++ K +DIGD +G+ G
Sbjct: 54 ELSLAGRLMAKRGHGKAAFGDLQDGSGKVQAYFRLNDLGPEKYELFKT-LDIGDFIGIRG 112
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++ +T GE++V V+ FV+L KSL PLP+K+HGL DV+ RYRQRY+D+I P+ +VF
Sbjct: 113 TVFKTRTGEVTVAVSDFVLLAKSLRPLPEKWHGLKDVELRYRQRYLDLIINPQSREVFVT 172
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
R++I++ IR+ ++ GF+EVETP++Q AGGA ARPF TYHN+LG L+LRIA EL+LKR
Sbjct: 173 RSRIIAAIRRYLDENGFLEVETPMMQTLAGGAVARPFKTYHNALGISLFLRIAPELYLKR 232
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+L+GGF+K+YEI R FRNEG+STRHNPEFT +E+YEAY+DY MMN+TE +++ V
Sbjct: 233 LLVGGFDKVYEINRNFRNEGISTRHNPEFTMLEIYEAYADYHDMMNLTERLISSVIEQVF 292
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
Y + PW R +M +V+E TG+DF L +E + A GLE
Sbjct: 293 TDHIFPYGEHRLDFNIPWPRYSMLEVVREKTGLDFENLS-----PEEAAVAARDAGLE-- 345
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
+S PS LN VFE V+P+LVQPTF+ DYP+E+SPLAK H L RFELF
Sbjct: 346 ----FDSEPSWAEALNAVFEDKVQPQLVQPTFIYDYPLELSPLAKRHEDAPHLVYRFELF 401
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R + Q+ EK K D+ ++
Sbjct: 402 IAGREIANAFSELNDPVDQRERFQAQL------------------EKRKRGDEEAH--VF 441
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFVTALEYGMPPA G+G+GIDRL+MLLT+S SIRDVI FP+L+
Sbjct: 442 DEDFVTALEYGMPPAGGLGIGIDRLIMLLTDSPSIRDVILFPLLR 486
>gi|407474802|ref|YP_006789202.1| lysyl-tRNA ligase LysS [Clostridium acidurici 9a]
gi|407051310|gb|AFS79355.1| lysyl-tRNA ligase LysS [Clostridium acidurici 9a]
Length = 493
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/517 (46%), Positives = 344/517 (66%), Gaps = 45/517 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K++ELR +G +P+ K++ TH + +++ Y L E VS+AGR++++
Sbjct: 14 LRRQKLKELREQGKDPFVNEKYNVTHKSQDIKDNYDEL--------EEKEVSIAGRIMSK 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK++F ++D G IQL+ + + + ++ +D K + DIGDI+GV G++ +T+ GE+S
Sbjct: 66 RGQGKVSFSDMQDSQGRIQLFVKMDNIGTESYDLFKTY-DIGDIVGVVGTVFKTKTGEVS 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V +LTKSL LP+K+HGL D D RYRQRYVD+I PEV + F KR KI+ IR
Sbjct: 125 VRVKEITLLTKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEVKETFIKRNKIIKSIRSF 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETP+L AGGA A+PF+T+HN+L D+ LRIA EL+LKR+++GGF+K+YE
Sbjct: 185 LDDRGYLEVETPILTTIAGGAAAKPFLTHHNTLDIDMQLRIANELYLKRLIVGGFDKVYE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G++FRNEG+S +HNPEFT IE+Y AY DY+ MM+ITE I+ +CA + G I+YQG E
Sbjct: 245 MGKMFRNEGISIKHNPEFTNIELYSAYEDYEDMMDITENIIAYCAEELYGTTLINYQGKE 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I + PW+R +MH+LVKE T +DF + +D K+AKE K + ++
Sbjct: 305 IDFKVPWKRVSMHDLVKEKTNVDFYSIESDEEARKIAKEQL------------KLEVTNN 352
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+ G+L+N FE E LVQPTFVL +P+E+SPLAK + + +T RFE F G E+AN
Sbjct: 353 MTRGHLVNLAFEEFCESDLVQPTFVLHHPVEVSPLAKRNPDNPMITNRFEAFANGWELAN 412
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R EEQ++Q R A E +D+DF+ AL
Sbjct: 413 AFSELNDPIDQKGRFEEQLKQ----REAGDEEAHP----------------MDEDFINAL 452
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E G+PP G+G+G+DR++M+LTNSASIRD+I FP +K
Sbjct: 453 EVGLPPTGGLGIGVDRMIMILTNSASIRDIILFPTMK 489
>gi|392423546|ref|YP_006464540.1| lysyl-tRNA synthetase (class II) [Desulfosporosinus acidiphilus
SJ4]
gi|391353509|gb|AFM39208.1| lysyl-tRNA synthetase (class II) [Desulfosporosinus acidiphilus
SJ4]
Length = 532
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 346/516 (67%), Gaps = 45/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K++ R GLEPYA ++ R+H A ++ + +++L EN VS+AGR++++R
Sbjct: 46 IRLEKLDLFRQAGLEPYADRYIRSHKAQEILDDFQNL--------ENQKVSIAGRIMSKR 97
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F+ ++D SG IQ+Y K+ L FD + F D+GDI+GV G + RT++GE+S+
Sbjct: 98 DQGKVIFVHIQDLSGRIQIYMRKDDLGETMFDLISKF-DVGDIVGVEGEVFRTKRGEISI 156
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+K++ PLP+K+HGLT+V+ RYRQRY+D++ P+V VF R+K++ +R+ +
Sbjct: 157 HARDVKLLSKAMRPLPEKFHGLTNVETRYRQRYLDLVMNPDVRQVFVTRSKVIRCMREYL 216
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E+ F+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GGFEK++EI
Sbjct: 217 EAKEFLEVETPTLHSIPGGAAARPFITHHNTLDIDLYLRIALELPLKRLIVGGFEKVFEI 276
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++++ +M +TEE++++ V+G I YQG I
Sbjct: 277 GRTFRNEGISIKHNPEFTMMELYQAYANFEDIMELTEEMISYIVKKVHGTTMITYQGQAI 336
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR M + E +G+DF + D ++AKE + +++
Sbjct: 337 EFKTPWRRLPMLEGILEYSGVDFRTIETDEEARQIAKEKGI-------------LVDEGT 383
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G ++NE FE VEP L+QPTF+ +P+EISPLAK + H T+RFE FI GRE+ANA
Sbjct: 384 SRGKIINEFFEAFVEPNLIQPTFITGHPVEISPLAKRNAEHPEYTDRFEAFIFGRELANA 443
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E Q A E+ K DD ++ LD+DFV ALE
Sbjct: 444 FSELNDPIDQRQRFEAQ-----------------AAERAK-GDDEAH--ILDEDFVQALE 483
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDRLVMLLT+SASIRDVI FP ++
Sbjct: 484 YGLPPTGGLGIGIDRLVMLLTDSASIRDVILFPTMR 519
>gi|392972497|ref|ZP_10337886.1| lysine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
gi|403047742|ref|ZP_10903200.1| lysyl-tRNA synthetase [Staphylococcus sp. OJ82]
gi|392509470|emb|CCI61193.1| lysine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
gi|402762483|gb|EJX16587.1| lysyl-tRNA synthetase [Staphylococcus sp. OJ82]
Length = 495
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K++RT +A L E + E + E++ +VS+AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGQKFERTSTAAPLHEDWDAYTKEELHDKEDESNVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ +QF+ D+GDI+G+ G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLTGQIQIYVRKDQVGDEQFEVWNS-ADLGDIVGIEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +F +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKTFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFINRSKILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ GGA ARPF T+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNQRGFLEVETPMMHQIPGGAAARPFETHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M+ITE ++ H + V G ++Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDITENMIRHISEKVLGTAKVNYGEEI 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R M + VKE TG+DF E+ D +E A G+E I +
Sbjct: 310 IDLESDWKRVHMADAVKEETGVDFFEVQTD----EEAKSLAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE NAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHGNAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E Q+ + +E +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRARFEAQLVEK------------------EEGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+SASIRDV+ FP +K
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSASIRDVLLFPYMK 493
>gi|20808736|ref|NP_623907.1| lysyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|254478749|ref|ZP_05092118.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
gi|39932223|sp|Q8R7N1.1|SYK_THETN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|20517378|gb|AAM25511.1| Lysyl-tRNA synthetase class II [Thermoanaerobacter tengcongensis
MB4]
gi|214035314|gb|EEB76019.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
Length = 499
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/536 (46%), Positives = 349/536 (65%), Gaps = 48/536 (8%)
Query: 49 ASSSSTSTSDREAVRAL---RIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANG 104
++S+ +D E + L R +K+ LRS G+EPY +++RT+ ++ ++ Y
Sbjct: 2 SNSNENILNDLENLNELLRVRREKLNILRSMGIEPYGIDRFERTNLSSDIKNDY------ 55
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
N E V++AGR++ +R+ GK +F ++D G IQ+Y + + ++ K+ +DI
Sbjct: 56 --ENFEGKTVTLAGRIMTKRSHGKASFADIQDRDGRIQIYVRYDNVGGKNYEIFKL-LDI 112
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+GV+G + +T+ GE+++ V F +L KSL LP+K+HGL D D RYRQRYVD+I P
Sbjct: 113 GDIIGVTGEVFKTKTGEITINVKDFKLLCKSLQVLPEKWHGLKDPDLRYRQRYVDLIINP 172
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
V +VF KR KI+ IR+ +++ GF+EVETPVL AGGA ARPF+T+HN+L D+YLRI
Sbjct: 173 SVREVFLKRTKIIKAIREFLDNRGFLEVETPVLHTIAGGAAARPFITHHNALDIDMYLRI 232
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A ELHLKR+++GGFEK+YEIGR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++
Sbjct: 233 ALELHLKRLIVGGFEKVYEIGRVFRNEGMDIRHNPEFTLLELYEAYTDYHGMMELTEQLF 292
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
+ A VNG I YQG EI L PW+R TM + +KE GIDF ++ D K+AK+
Sbjct: 293 AYVAEKVNGSTKIIYQGTEIDLTPPWKRITMVDAIKEYVGIDFEKVATDEEARKIAKDLN 352
Query: 402 LRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
L L+ D G ++ VF+ +VE L+QPTFV+DYP+E+SPLAK R
Sbjct: 353 LE-----LKKPDM-------KKGEVIALVFDELVEKHLIQPTFVMDYPVEVSPLAKRKRD 400
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
+ T RFE FI GRE+ANAFSEL DP+DQ+ R EQ+RQ +
Sbjct: 401 NPAFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLRQ-------------------R 441
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E+ D + +D+DF+ ALE GMPP G+G+G+DRLVM +T+S SIRDVI FP +K
Sbjct: 442 EAGDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDSYSIRDVILFPTMK 496
>gi|421729422|ref|ZP_16168554.1| lysyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407076666|gb|EKE49647.1| lysyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 499
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 345/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + Q+ Y+ L+ E + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRENGIDPFGERFERTHQSQQIIVAYQELSKEELEEKAIE-VTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + +Q++ K D+GD++G++G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKS-SDLGDVIGITGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF N++ V +E A G+E I +S +VG
Sbjct: 315 DLKPEWKRLHMVDAVKEATGVDF---WNEMTV-EEARGHAKEHGIE------ITNSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ +E +D ++ +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>gi|433446477|ref|ZP_20410460.1| lysyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432000453|gb|ELK21349.1| lysyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 494
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 344/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ +LR KG++P+ +++RTH A +L +Y HL+ EE + VS+AGR++ +R
Sbjct: 12 VRREKLHKLREKGIDPFGKRFERTHKAEELFALYGHLSK-EELEEKQVQVSIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y K+ + +Q++ D+GDI+GV G++ +T+ GELS+
Sbjct: 71 GKGKAGFAHIQDLTGQIQIYVRKDDVGEEQYEIFDT-SDLGDIVGVQGTVFKTKVGELSI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+S+ +LTKSL PLP+KYHGL D+++RYRQRY+D+I PE F R+ I+ +R+ +
Sbjct: 130 KVHSYEMLTKSLRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DQKGYLEVETPMMHSIAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+DY +M +TE+++ H A V G I Y E+
Sbjct: 250 GRVFRNEGISTRHNPEFTMLELYEAYADYTDIMKLTEDMIAHIAQEVLGTTKIQYGEHEV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + +KE G+DF + +D +E A G+E + + G
Sbjct: 310 DLTPSWKRLHMVDAIKEYVGVDFWKHMSD----EEARQLAKEHGVE------VAPHMTFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 360 HIVNEFFEQKVEQHLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVAREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+R+ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 420 LNDPIDQRERFEAQLREK------------------EQGNDEAHE--MDEDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|229027923|ref|ZP_04184078.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
gi|229170927|ref|ZP_04298530.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
gi|423461660|ref|ZP_17438456.1| lysyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|228612593|gb|EEK69812.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
gi|228733437|gb|EEL84264.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
gi|401135322|gb|EJQ42921.1| lysyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
Length = 499
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/518 (45%), Positives = 344/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +KE +G DF N + V A+E L + I+ +
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEARE---------LAKEHNVGIKDTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|301051815|ref|YP_003790026.1| lysyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
gi|300373984|gb|ADK02888.1| lysyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
Length = 499
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKYIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|329925492|ref|ZP_08280366.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939775|gb|EGG36115.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 505
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++R H A + + Y L+ E + + V++AGR++A+R
Sbjct: 22 IRRNKLDELRKLGIDPFGGKYEREHHAGDILKQYDELSKEELEEKQVE-VNLAGRIMAKR 80
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + Q++ + +D+GDI+GV G + +T+ GE +V
Sbjct: 81 GMGKASFAHIQDLSGRIQIYVRQDSVAEAQYEAFSI-LDLGDIIGVKGVLFKTKTGETTV 139
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+K+HGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 140 KVKELEVLSKSLYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYL 199
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 200 DSQGYLEVETPTLHSIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 259
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I YQG E+
Sbjct: 260 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEV 319
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE G+DF+ + ++ E R L + K +E + G
Sbjct: 320 DLTPQWRRVSMVDAVKEVVGVDFS-----VDMSNEEAHR-----LAKEHKVPVEPHMTFG 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV +P+EISPLAK + T+RFELFI RE ANAFSE
Sbjct: 370 HILNAFFEQFVEETLIQPTFVTGHPVEISPLAKKNDVDPRFTDRFELFIVAREHANAFSE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 430 LNDPIDQRQRFEAQMKEK------------------EQGNDEAHE--MDEDFLRALEYGM 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 470 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPHMR 502
>gi|342217216|ref|ZP_08709863.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588106|gb|EGS31506.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 633
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/520 (46%), Positives = 350/520 (67%), Gaps = 47/520 (9%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
+R +R +K++EL+ G P+ + K+D + +++ Y S+ E VSVAGRV
Sbjct: 7 MRLMRRQKLQELQDAGKNPFVHEKYDVKEYSTDIKDNY--------SDYEGKKVSVAGRV 58
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK+ FL L+D G IQL+ K+ +L + ++ +K + DIGDI+G+ G + T+ G
Sbjct: 59 MSKRGHGKIMFLDLQDMKGKIQLFARKD-VLGEDYEDVKTW-DIGDIVGIKGEVFTTKAG 116
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+S+ V V+L+KSL LP+K+HGL D D RYRQRYVD+I PE ++F KR+KI+ I
Sbjct: 117 EVSIRVTQAVLLSKSLQILPEKFHGLKDTDLRYRQRYVDLIVNPENKEIFIKRSKIIKAI 176
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R+ ++ LG++EV+TP+L AGGA ARPF+T+HN+L D+ +RIA EL LKR+++GGF+K
Sbjct: 177 RRFLDDLGYLEVDTPILGTVAGGANARPFLTHHNALDIDMQMRIANELFLKRLIVGGFDK 236
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+G++FRNEG+ TRHNPEFT IE+Y+AY+DY+ MM ITE + + A V G I+YQ
Sbjct: 237 VYEMGKMFRNEGIDTRHNPEFTNIELYQAYTDYEEMMRITENMFAYVAQEVLGTAKINYQ 296
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVI 417
GV+I L PWRR TMH+ VKE GIDF+++ D L++AKE L+
Sbjct: 297 GVDIDLTPPWRRITMHDAVKEYAGIDFDQVKTDQEALELAKEKGLKP------------- 343
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
E+ + G++L+E+FE E KLVQPTFV+ +P+EISPL+K + H +T+RFE FI E
Sbjct: 344 EAFWTKGHVLSELFEEYCEEKLVQPTFVIGHPVEISPLSKRNPDHPEITQRFEAFINTWE 403
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAFSEL DP+DQ+ R E+Q+ E +E DD ++ +D DF+
Sbjct: 404 FANAFSELNDPIDQKGRFEKQL------------------EDKEEGDDEAH--PMDYDFI 443
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE G+PP G+G+G+DR++MLLT+ ASIRD+I FP +K
Sbjct: 444 NALEVGLPPTGGLGIGVDRMIMLLTDQASIRDIILFPTMK 483
>gi|261403949|ref|YP_003240190.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261280412|gb|ACX62383.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 503
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ELR G++P+ K++R H A + + Y L+ E + + V++AGR++A+R
Sbjct: 20 IRRNKLDELRKLGIDPFGGKYEREHHAGDILKQYDELSKEELEEKQVE-VNLAGRIMAKR 78
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F ++D SG IQ+Y ++ + Q++ + +D+GDI+GV G + +T+ GE +V
Sbjct: 79 GMGKASFAHIQDLSGRIQIYVRQDSVAEAQYEAFSI-LDLGDIIGVKGVLFKTKTGETTV 137
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L+KSL PLP+K+HGL DV+ RYRQRYVD+I P+V F R++I+ +R+ +
Sbjct: 138 KVKELEVLSKSLYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYL 197
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 198 DSQGYLEVETPTLHSIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 257
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I YQG E+
Sbjct: 258 GRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEV 317
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR +M + VKE G+DF+ + ++ E R L + K +E + G
Sbjct: 318 DLTPQWRRVSMVDAVKEVVGVDFS-----VDMSNEEAHR-----LAKEHKVPVEPHMTFG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV +P+EISPLAK + T+RFELFI RE ANAFSE
Sbjct: 368 HILNAFFEQFVEETLIQPTFVTGHPVEISPLAKKNDVDPRFTDRFELFIVAREHANAFSE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 428 LNDPIDQRQRFEAQMKEK------------------EQGNDEAHE--MDEDFLRALEYGM 467
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 468 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPHMR 500
>gi|229148486|ref|ZP_04276743.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
gi|228635028|gb|EEK91600.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
Length = 499
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + D+++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE++V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDSRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|423589376|ref|ZP_17565462.1| lysyl-tRNA synthetase [Bacillus cereus VD045]
gi|401224029|gb|EJR30589.1| lysyl-tRNA synthetase [Bacillus cereus VD045]
Length = 499
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELDEKEIAVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + D+++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE++V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|423399603|ref|ZP_17376776.1| lysyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|423480147|ref|ZP_17456859.1| lysyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|401658209|gb|EJS75706.1| lysyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|402423650|gb|EJV55856.1| lysyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 499
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/518 (45%), Positives = 344/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKRVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +KE +G DF N + V A+E L + I+ +
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEARE---------LAKEHNVGIKDTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|295702317|ref|YP_003595392.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294799976|gb|ADF37042.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 494
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 342/514 (66%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+ LR +G++P+ +++RTH++ QL Y L +E EN+ VS+AGR++ +
Sbjct: 12 VRREKMSNLRDQGIDPFGQRFERTHTSQQLISEYDELT--KEQLEENEVPVSLAGRIMTK 69
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQLY K+ + +Q++ VDIGD++GV G + +T+ GELS
Sbjct: 70 RGKGKAGFAHVQDLTGQIQLYVRKDAIGEEQYEIFSS-VDIGDLVGVEGVLFKTKVGELS 128
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +LTK+L PLPDKYHGL D+++RYRQRY+D+I+ PE F R++I+ +R+
Sbjct: 129 IKVKDFTLLTKALRPLPDKYHGLKDIEQRYRQRYLDLITNPESKQTFISRSRIIQSMRRY 188
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++EVETP++ AGGA ARPFVT+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 189 LDNHGYLEVETPMMHSIAGGAAARPFVTHHNALDMELYMRIAIELHLKRLIVGGLEKVYE 248
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I Y E
Sbjct: 249 IGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGNQE 308
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L W R M + +K+ TG+DF ET++ L + I
Sbjct: 309 VDLTPEWTRLHMVDAIKQYTGVDF---------WGETSVEE-ARALAKEHGVEITEHMQY 358
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE +L+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+
Sbjct: 359 GHIVNEFFEQKVEEQLIQPTFIYGHPVEISPLAKKNAEDPRFTDRFELFIVAREHANAFT 418
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+++ ++ +D ++E +DDDF+ ALEYG
Sbjct: 419 ELNDPIDQRERFEAQLKEK------------------EQGNDEAHE--MDDDFIEALEYG 458
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 459 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPHMR 492
>gi|452994954|emb|CCQ93407.1| lysyl-tRNA synthetase [Clostridium ultunense Esp]
Length = 496
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/525 (45%), Positives = 346/525 (65%), Gaps = 38/525 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
D + +R +K++ LR G++P+ K++RT A Q+ Y AN EE S + V+VA
Sbjct: 5 DANEIETIRREKLDTLREWGIDPFGKKFNRTDWAGQIHARYDEKAN-EELESLSIEVAVA 63
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR++ +R GK F L+D +G IQ+Y +R+ + + D+GDI+GV G++ +T
Sbjct: 64 GRIMTKRVQGKAGFAHLQDLTGRIQIYVRLDRVGESAYKAFTL-SDLGDIVGVRGTVFKT 122
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
GE ++ V+ F LTKSL PLPDK+HGL D++ RYR+RY+D+I PEV + F R++IV
Sbjct: 123 RTGETTIKVDEFTFLTKSLRPLPDKFHGLKDIETRYRKRYIDLIVNPEVKETFLIRSRIV 182
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
S +R+ ++ G++EVETP L AGGA ARPF+TYHN+L ++LRIA ELHLKR+++GG
Sbjct: 183 SAMRRYLDKEGYIEVETPTLHAIAGGAAARPFITYHNALEMQMFLRIAIELHLKRLIVGG 242
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
EK+YEIGR++RNEG+STRHNPEFT +E+YEAY+D+ +M +TE ++ + V G L I
Sbjct: 243 MEKVYEIGRVYRNEGISTRHNPEFTMLELYEAYADFHDIMTLTENLIAYITNEVKGTLQI 302
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDF-NELGND--LKVAKETTLRALGDGLENKDK 414
+YQG + L PW+R M +L+ E TG++F N++ ++ ++A+E G+E
Sbjct: 303 EYQGNWVDLSTPWKRAHMVDLIHEVTGVNFWNKMSDEEAHRLAREY-------GVE---- 351
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
+E + G+++NE FE VE L+QP FV +P+EISPLAK + + T+RFELFI
Sbjct: 352 --VEERMTFGHIVNEFFEQKVEHTLIQPVFVYGHPVEISPLAKKNEKDPRFTDRFELFIV 409
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE ANAFSEL DP+DQR R EQ++ E+ + E+ +D+
Sbjct: 410 GREHANAFSELNDPIDQRQRFLEQLK-----------EREAGNEEAH---------MMDE 449
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
DF+ ALE GMPP G+G+G+DRLVMLLTNS SIRDV+ FP+++ Q
Sbjct: 450 DFLEALEIGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPLMRFQ 494
>gi|30018348|ref|NP_829979.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|206972583|ref|ZP_03233526.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
gi|218232500|ref|YP_002364927.1| lysyl-tRNA synthetase [Bacillus cereus B4264]
gi|228919027|ref|ZP_04082407.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228950625|ref|ZP_04112760.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228956518|ref|ZP_04118315.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229039982|ref|ZP_04189746.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
gi|229107763|ref|ZP_04237400.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|229125594|ref|ZP_04254627.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|229142883|ref|ZP_04271325.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|229176677|ref|ZP_04304082.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
gi|229188362|ref|ZP_04315411.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|296500912|ref|YP_003662612.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|365164178|ref|ZP_09360263.1| lysyl-tRNA synthetase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410697|ref|ZP_17387817.1| lysyl-tRNA synthetase [Bacillus cereus BAG3O-2]
gi|423427630|ref|ZP_17404661.1| lysyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|423433519|ref|ZP_17410523.1| lysyl-tRNA synthetase [Bacillus cereus BAG4O-1]
gi|423506567|ref|ZP_17483156.1| lysyl-tRNA synthetase [Bacillus cereus HD73]
gi|423632875|ref|ZP_17608620.1| lysyl-tRNA synthetase [Bacillus cereus VD154]
gi|423633592|ref|ZP_17609245.1| lysyl-tRNA synthetase [Bacillus cereus VD156]
gi|423644714|ref|ZP_17620331.1| lysyl-tRNA synthetase [Bacillus cereus VD166]
gi|423651398|ref|ZP_17626968.1| lysyl-tRNA synthetase [Bacillus cereus VD169]
gi|423658472|ref|ZP_17633771.1| lysyl-tRNA synthetase [Bacillus cereus VD200]
gi|449086744|ref|YP_007419185.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|39932142|sp|Q81J70.1|SYK_BACCR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226737091|sp|B7HJ16.1|SYK_BACC4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|29893888|gb|AAP07180.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|206732485|gb|EDZ49664.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
gi|218160457|gb|ACK60449.1| lysine--tRNA ligase [Bacillus cereus B4264]
gi|228595161|gb|EEK52931.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228606844|gb|EEK64260.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
gi|228640595|gb|EEK96983.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|228657911|gb|EEL13716.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|228675736|gb|EEL30943.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|228727390|gb|EEL78583.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
gi|228803208|gb|EEM50029.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228809100|gb|EEM55584.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228840676|gb|EEM85937.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|296321964|gb|ADH04892.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|363613193|gb|EHL64715.1| lysyl-tRNA synthetase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108025|gb|EJQ15961.1| lysyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|401109928|gb|EJQ17845.1| lysyl-tRNA synthetase [Bacillus cereus BAG3O-2]
gi|401111582|gb|EJQ19471.1| lysyl-tRNA synthetase [Bacillus cereus BAG4O-1]
gi|401258919|gb|EJR65100.1| lysyl-tRNA synthetase [Bacillus cereus VD154]
gi|401269498|gb|EJR75528.1| lysyl-tRNA synthetase [Bacillus cereus VD166]
gi|401278450|gb|EJR84383.1| lysyl-tRNA synthetase [Bacillus cereus VD169]
gi|401283302|gb|EJR89197.1| lysyl-tRNA synthetase [Bacillus cereus VD156]
gi|401287805|gb|EJR93576.1| lysyl-tRNA synthetase [Bacillus cereus VD200]
gi|402447392|gb|EJV79244.1| lysyl-tRNA synthetase [Bacillus cereus HD73]
gi|449020501|gb|AGE75664.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 499
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 343/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + D+++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE++V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|294496950|ref|YP_003560650.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|384049301|ref|YP_005497318.1| lysyl-tRNA synthetase [Bacillus megaterium WSH-002]
gi|294346887|gb|ADE67216.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|345446992|gb|AEN92009.1| Lysyl-tRNA synthetase [Bacillus megaterium WSH-002]
Length = 494
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 342/514 (66%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+ LR +G++P+ +++RTH++ QL Y L +E EN+ VS+AGR++ +
Sbjct: 12 VRREKMSNLRDQGIDPFGQRFERTHTSQQLISEYDELT--KEQLEENEVPVSLAGRIMTK 69
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQLY K+ + +Q++ VDIGD++GV G + +T+ GELS
Sbjct: 70 RGKGKAGFAHVQDLTGQIQLYVRKDAIGEEQYEIFSS-VDIGDLVGVEGVLFKTKVGELS 128
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +LTK+L PLPDKYHGL D+++RYRQRY+D+I+ PE F R++I+ +R+
Sbjct: 129 IKVKDFTLLTKALRPLPDKYHGLKDIEQRYRQRYLDLITNPESKQTFISRSRIIQSMRRY 188
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++EVETP++ AGGA ARPFVT+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 189 LDNHGYLEVETPMMHSIAGGAAARPFVTHHNALDMELYMRIAIELHLKRLIVGGLEKVYE 248
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G I Y E
Sbjct: 249 IGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGDQE 308
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L W R M + +K+ TG+DF ET++ L + I
Sbjct: 309 VDLTPEWTRLHMVDAIKQYTGVDF---------WGETSVEE-ARALAKEHGVEITEHMQY 358
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE +L+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+
Sbjct: 359 GHIVNEFFEQKVEEQLIQPTFIYGHPVEISPLAKKNAEDPRFTDRFELFIVAREHANAFT 418
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+++ ++ +D ++E +DDDF+ ALEYG
Sbjct: 419 ELNDPIDQRERFEAQLKEK------------------EQGNDEAHE--MDDDFIEALEYG 458
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 459 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPHMR 492
>gi|229083395|ref|ZP_04215745.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228699931|gb|EEL52566.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 499
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S +L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTKELLSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +Q++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDEQYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTK+L PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKALRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKQVLGTTTIQYGEQEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A G+E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNPMSVEEARAL-AKEHGVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE +L+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEEELIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|319654915|ref|ZP_08008989.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317393340|gb|EFV74104.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 496
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/529 (46%), Positives = 352/529 (66%), Gaps = 37/529 (6%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS 109
S S +D+ VR +K+ LR +G++P+ ++DR+H + +L E Y L EE
Sbjct: 2 SQSHEELNDQLKVRR---EKMNSLREQGMDPFGKRFDRSHQSKELIEQYGELEK-EEIEE 57
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILG 169
+N V++AGR++ +R GK F ++D SG IQ+Y K+ + + + + D+GDI+G
Sbjct: 58 KNVSVTLAGRIMTKRGKGKAGFAHIQDLSGQIQIYIRKDAVGEENYAIFES-ADLGDIIG 116
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
VSG++ +T+ GELSV F +LTKSL PLPDK+HGL DV++RYRQRY+D+I E
Sbjct: 117 VSGTLFKTKVGELSVKAQEFDLLTKSLRPLPDKFHGLKDVEQRYRQRYLDLIMSEESKQT 176
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
F R++I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELH
Sbjct: 177 FITRSRIIQSMRRYLDSHGYLEVETPMMHSIAGGASARPFITHHNALDMELYMRIAIELH 236
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GG EK+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE ++ H A
Sbjct: 237 LKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYRDIMSLTENLIAHIAQ 296
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR-ALGDG 408
V G ++ Y E+ L+ W+R M + +KE TG+DF + + +KE + A G
Sbjct: 297 EVLGTTSVQYGEYEVDLKPEWKRLHMVDAIKEYTGVDFWK-----ETSKEEAQQLAKEHG 351
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E KD G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+R
Sbjct: 352 VEIKDNM------EYGHIVNEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNEEDPRFTDR 405
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI RE ANAF+EL DP+DQR R E Q+++ +E +D ++
Sbjct: 406 FELFIVAREHANAFTELNDPIDQRERFEAQLKER------------------EEGNDEAH 447
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DDDF+ ALEYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 448 --MMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 494
>gi|229159250|ref|ZP_04287275.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
gi|228624265|gb|EEK81066.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
Length = 499
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/516 (45%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF + + ++ A+E L + I+ + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADFWKPMS-VEEARE---------LAKEHNVDIKDTMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|366163755|ref|ZP_09463510.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 506
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/535 (44%), Positives = 344/535 (64%), Gaps = 46/535 (8%)
Query: 47 RRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGE 105
+ + D + +R K+ EL+ +P+ K+D +HS +++ +
Sbjct: 11 QNTQDDNLEVQDLNEILKVRRVKLAELQKNDKDPFKIVKYDVSHST-------KYIVDNF 63
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIG 165
ES E VS+AGR++++R GK +F +RD IQ+Y + + + ++ ++ K F DIG
Sbjct: 64 ES-MEGSMVSIAGRLMSKRGMGKASFCDVRDRDSKIQIYIKVDEIGAEVYEDFKKF-DIG 121
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
DI+GV G + RT KGE+S+ N+ ++L KSL PLP+K+HGLT+VD RYRQRYVD+I PE
Sbjct: 122 DIVGVKGEVFRTHKGEISLKANNIILLAKSLQPLPEKWHGLTNVDLRYRQRYVDLIVNPE 181
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V D F R+ I+ IRK ++ GF+EV+TP+L GGA A+PF+T+HN+L D+YLRIA
Sbjct: 182 VRDTFIVRSMIIKAIRKFLDERGFLEVDTPLLNTIPGGAAAKPFITHHNTLDIDMYLRIA 241
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
EL+LKR+++GG E++YE+GR+FRNEG+S +HNPEFT +E+YEAY+DY+ MM+++E++++
Sbjct: 242 PELYLKRLIVGGLERVYEMGRMFRNEGMSVKHNPEFTLMEVYEAYTDYKGMMDLSEQLIS 301
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTL 402
A V G I+YQG EI L PW R TM V++ G++FN + +D +AKE L
Sbjct: 302 TVAKEVLGTTKINYQGQEIDLTPPWNRMTMIEAVEKYAGVNFNNITSDEEARNIAKEKKL 361
Query: 403 RALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRH 462
IE +P+ G +LN +FE E L+QPTF++DYP+E+SPL K
Sbjct: 362 H-------------IEGNPTKGEVLNLMFEEFAEEHLIQPTFIMDYPVEVSPLTKRKPDM 408
Query: 463 AGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE 522
TERFELFI REMANA+SEL DP+DQ+ R QV EKR A E +
Sbjct: 409 PSFTERFELFITSREMANAYSELNDPIDQKGRFLSQV----EKREAGDEEAN-------- 456
Query: 523 SDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+TALEYGMPP G+G+GIDRL+MLLT+S SIRD++ FP +K
Sbjct: 457 --------MMDEDFITALEYGMPPTGGLGIGIDRLIMLLTDSYSIRDILLFPTMK 503
>gi|421075863|ref|ZP_15536867.1| Lysyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525975|gb|EIW49097.1| Lysyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 497
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 340/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ++G+EP+A K+D T AN++ LAN E+ E +AGR++A R
Sbjct: 21 VRREKMTAFEAQGIEPFARKYDVTIHANEV------LANFEQL--EGQSARIAGRIMAVR 72
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ L D SG +Q Y ++ + ++D+ K+ +DIGDI+G+ G + +T++GE+S+
Sbjct: 73 GHGKTSFVHLMDMSGKVQAYFRQDVVGEVEYDKFKL-LDIGDIIGIEGVIFKTQRGEISL 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF IL KSL PLP+K+HGL DV+ RYRQRY+D+I PEV + F R+KI+ +R +
Sbjct: 132 KATSFEILAKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNTFVTRSKIIKSLRSIL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETP++ AGGA ARPFVT+HN+L DL+LRIA EL+LKR+++GGFE++YE+
Sbjct: 192 DKRDYLEVETPMMHPIAGGAAARPFVTHHNALDMDLFLRIAPELYLKRLIVGGFERVYEV 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S RHNPEFT +E+Y+AYSDYQ +M +TE++V+ AL V G I YQG EI
Sbjct: 252 GRVFRNEGISVRHNPEFTIVELYQAYSDYQDLMRLTEDVVSGIALEVLGTTQITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ T +DF+ VA RA+ D L K ES +G
Sbjct: 312 NLAPPWNRLTMTEAVKKYTDVDFD------TVATLEEARAIADKLGVK----YESKNGIG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN VFE VE L+QPTF++ +P EISPLAK ++ + +T+RFE+F+ RE+AN FSE
Sbjct: 362 GILNNVFEEKVEEHLIQPTFIIGHPTEISPLAKRNKENPEITDRFEVFVFARELANGFSE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R QV Q + DD ++ +D D+V ALEYG+
Sbjct: 422 LNDPIDQEGRFASQVEQR------------------ESGDDEAH--MMDHDYVNALEYGL 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 462 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPHMR 494
>gi|229067841|ref|ZP_04201159.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
gi|423438958|ref|ZP_17415939.1| lysyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|228715325|gb|EEL67183.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
gi|401115446|gb|EJQ23298.1| lysyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
Length = 499
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 343/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + D+++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE++V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + + + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNPMSIEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|359410025|ref|ZP_09202490.1| Lysyl-tRNA synthetase [Clostridium sp. DL-VIII]
gi|357168909|gb|EHI97083.1| Lysyl-tRNA synthetase [Clostridium sp. DL-VIII]
Length = 501
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/521 (46%), Positives = 341/521 (65%), Gaps = 43/521 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
LR K+ EL++ G +P+ YK +RTH++ +++ Y L E V+V GR+++
Sbjct: 20 GLRRAKLTELQNAGKDPFDVYKINRTHTSEEVKANYDEL--------EGKEVTVVGRIMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + +++ + Q K +D+GD + V+G + +T+ E+
Sbjct: 72 KRGQGKVVFSDIHDIDGKIQLFLKIDKVGEENLKQYKT-LDLGDWVAVTGEVFKTKTEEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
+V N+F ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV F KR+KI+S +R+
Sbjct: 131 TVNANTFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKTTFIKRSKIISAMRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDNKGFLEVETPILSPIAGGAAARPFITHHNTLDMDMYLRIATELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+ RHNPEFT IE+YEAYSDY MM ITE +V + +NG + YQG
Sbjct: 251 EIGRNFRNEGMDVRHNPEFTAIELYEAYSDYNDMMEITENMVAYICEKINGTTKVTYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIES 419
EI PWRR TM ++VKE G+DFNE+ ++ + +AKE L LE K
Sbjct: 311 EIDFAPPWRRVTMVDVVKEHAGVDFNEIKSNEEAQAIAKEKHLE-FAKPLETVTK----- 364
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
G++LN ++E E ++QPTFV+DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 365 ----GDVLNALYEEFGEANMIQPTFVMDYPVEISPLTKKKRGNPEFTERFEGFVFGRELC 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NA+SEL DP+ QR R E+Q ++ + DD +Y LD+ F++A
Sbjct: 421 NAYSELNDPIVQRQRFEQQAKER------------------ELGDDEAY--LLDEQFMSA 460
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LE GMPP GMG+GIDRL+M LT+SASIRDVI FP ++ Q+
Sbjct: 461 LETGMPPTGGMGMGIDRLIMFLTDSASIRDVILFPTMRPQK 501
>gi|357420091|ref|YP_004933083.1| lysyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397557|gb|AER66986.1| lysyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 501
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/517 (48%), Positives = 341/517 (65%), Gaps = 36/517 (6%)
Query: 66 RIKKVEELRSK-GLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
R K+ LR + G +P+ KWDR H+ ++E Y +L E + + +S AGR++
Sbjct: 19 RTDKLRRLREEEGYDPFKVEKWDRRHTLGYVKEKYDYLQPDEVAE---EGISTAGRIMTI 75
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK AFL L D+ TIQL ++ + +Q+ K +VD GD LGV G RT +GELS
Sbjct: 76 RRHGKAAFLDLADEYDTIQLCFQQNVVGEEQYTFFKKWVDTGDFLGVVGVPIRTRRGELS 135
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+LV F +L+K+L PLP+K+HGL D + RYR RYVD+I+ PEV + FRKRAKI++ IR
Sbjct: 136 ILVKEFKLLSKALRPLPEKWHGLKDTEIRYRHRYVDLIANPEVRETFRKRAKIINAIRSV 195
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E G +EVETP+L AGGA ARPF+TYHN+LG +LYLRIATEL+LKR+++G F ++YE
Sbjct: 196 LEKHGTIEVETPILSPIAGGANARPFITYHNALGINLYLRIATELYLKRLIVGMFGRVYE 255
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IG+ FRNEG+ T HNPEFT +E+Y AY+DY+ +MN+TEE++ A AV G+ I+YQG E
Sbjct: 256 IGKNFRNEGIDTMHNPEFTAMEVYWAYADYEDIMNLTEELIVAAADAVGGR-RINYQGTE 314
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ LE P+RR TM LVKE G D +E+ +D +E A GLE I+ + S
Sbjct: 315 LILEPPFRRATMKELVKEYCGYDLDEIKSD----EEARAFAKKKGLE------IKGTESR 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
+L E+FE VE KL+QPTFV+ +P EISPLAK + + T RFEL+I G E+ANAFS
Sbjct: 365 FVILAELFETFVEDKLIQPTFVIGHPTEISPLAKRNPDNPDFTNRFELYIYGNEVANAFS 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DPLDQR R +Q + K +E D+ ++ D+D++ ALEYG
Sbjct: 425 ELNDPLDQRERFLDQAK------------------KKEEGDEEAH--AFDEDYIMALEYG 464
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+PP G+G+GIDRL M LT+S SIRDVI FP ++ +Q
Sbjct: 465 LPPTGGLGVGIDRLTMFLTDSKSIRDVILFPTMRPKQ 501
>gi|257899976|ref|ZP_05679629.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
gi|293571081|ref|ZP_06682122.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
gi|430842712|ref|ZP_19460624.1| lysyl-tRNA synthetase [Enterococcus faecium E1007]
gi|431084346|ref|ZP_19496016.1| lysyl-tRNA synthetase [Enterococcus faecium E1604]
gi|431115408|ref|ZP_19497825.1| lysyl-tRNA synthetase [Enterococcus faecium E1613]
gi|431600910|ref|ZP_19522395.1| lysyl-tRNA synthetase [Enterococcus faecium E1861]
gi|431739291|ref|ZP_19528228.1| lysyl-tRNA synthetase [Enterococcus faecium E1972]
gi|431742245|ref|ZP_19531140.1| lysyl-tRNA synthetase [Enterococcus faecium E2039]
gi|257837888|gb|EEV62962.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
gi|291608864|gb|EFF38145.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
gi|430492936|gb|ELA69277.1| lysyl-tRNA synthetase [Enterococcus faecium E1007]
gi|430564890|gb|ELB04067.1| lysyl-tRNA synthetase [Enterococcus faecium E1604]
gi|430568567|gb|ELB07607.1| lysyl-tRNA synthetase [Enterococcus faecium E1613]
gi|430590067|gb|ELB28152.1| lysyl-tRNA synthetase [Enterococcus faecium E1861]
gi|430596121|gb|ELB33972.1| lysyl-tRNA synthetase [Enterococcus faecium E1972]
gi|430600401|gb|ELB38050.1| lysyl-tRNA synthetase [Enterococcus faecium E2039]
Length = 498
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/515 (47%), Positives = 340/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAQKVLGTAKITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF KE TL AL L K + + V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WKEMTLEEAL--ALAEKHNVEVTEAMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|15612661|ref|NP_240964.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
gi|11387139|sp|Q9KGG4.1|SYK_BACHD RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|10172710|dbj|BAB03817.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
Length = 501
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/515 (48%), Positives = 340/515 (66%), Gaps = 34/515 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R +K++ L ++G P+ K++RT +A ++E Y + EE E V +AGRV+ +
Sbjct: 12 AVRREKLQNLEAEGANPFGGKFERTDTAQSMKEKY-DAKSKEELEEETHEVVLAGRVMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+ + +D L +DIGDI+GV G +T+ GELS
Sbjct: 71 RGKGKAGFAHIQDLTGQIQIYVRKDAVGDKSYD-LFTSIDIGDIVGVKGVAFKTKVGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V F +LTKSL PLPDKYHGL DV++RYRQRY+D+I PEV D F R+KI+ +R+
Sbjct: 130 VKVQDFQLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLIVNPEVRDTFVLRSKILQSMRRY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETP + GGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LDDRGYLEVETPTMHSIPGGASARPFVTHHNALDMTLYMRIAIELHLKRLIVGGMEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE ++ H A V G TI Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMELTELLIAHIAKDVLGTTTITYGEHE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
+ LE WRR M +KE TG+DF NE+ ++ RAL + ++ + +
Sbjct: 310 VNLEPKWRRVHMVEAIKEETGVDFWNEMSDE-------EARALA----KEHNVPVKETMT 358
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++NE FE VE KL+QPTFV +P+ ISPLAK + T+RFELFI GRE ANAF
Sbjct: 359 YGHVVNEFFEHFVEEKLIQPTFVYGHPVAISPLAKKNPDDPRFTDRFELFIVGREHANAF 418
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E+Q+ + ++ DD ++ +D+DFV +LEY
Sbjct: 419 SELNDPIDQRHRFEQQLVER------------------EQGDDEAH--MMDEDFVESLEY 458
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 459 GMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 493
>gi|431771719|ref|ZP_19560096.1| lysyl-tRNA synthetase [Enterococcus faecium E1644]
gi|430632709|gb|ELB68910.1| lysyl-tRNA synthetase [Enterococcus faecium E1644]
Length = 498
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/515 (47%), Positives = 340/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF +E TL AL L K + S V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WQEMTLEEAL--ALAEKHNVEVTESMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|227552660|ref|ZP_03982709.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
gi|257888628|ref|ZP_05668281.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|257897417|ref|ZP_05677070.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
gi|293378825|ref|ZP_06624980.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
gi|424762102|ref|ZP_18189628.1| lysine--tRNA ligase [Enterococcus faecalis TX1337RF]
gi|425055298|ref|ZP_18458779.1| lysine--tRNA ligase [Enterococcus faecium 505]
gi|431043727|ref|ZP_19493017.1| lysyl-tRNA synthetase [Enterococcus faecium E1590]
gi|431753383|ref|ZP_19542057.1| lysyl-tRNA synthetase [Enterococcus faecium E2620]
gi|431758735|ref|ZP_19547360.1| lysyl-tRNA synthetase [Enterococcus faecium E3083]
gi|431763499|ref|ZP_19552049.1| lysyl-tRNA synthetase [Enterococcus faecium E3548]
gi|227178189|gb|EEI59161.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
gi|257824682|gb|EEV51614.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|257833982|gb|EEV60403.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
gi|292642366|gb|EFF60521.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
gi|402425830|gb|EJV57975.1| lysine--tRNA ligase [Enterococcus faecium TX1337RF]
gi|403034240|gb|EJY45704.1| lysine--tRNA ligase [Enterococcus faecium 505]
gi|430561315|gb|ELB00585.1| lysyl-tRNA synthetase [Enterococcus faecium E1590]
gi|430612290|gb|ELB49341.1| lysyl-tRNA synthetase [Enterococcus faecium E2620]
gi|430617103|gb|ELB53989.1| lysyl-tRNA synthetase [Enterococcus faecium E3083]
gi|430622272|gb|ELB59009.1| lysyl-tRNA synthetase [Enterococcus faecium E3548]
Length = 498
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/515 (47%), Positives = 340/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF KE TL AL L K + + V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WKEMTLEEAL--ALAEKHNVEVTEAMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|423583727|ref|ZP_17559838.1| lysyl-tRNA synthetase [Bacillus cereus VD014]
gi|401208359|gb|EJR15126.1| lysyl-tRNA synthetase [Bacillus cereus VD014]
Length = 499
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 343/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + D+++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KAIGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE++V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|289522352|ref|ZP_06439206.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504188|gb|EFD25352.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 503
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/530 (47%), Positives = 353/530 (66%), Gaps = 42/530 (7%)
Query: 55 STSDREAVRALRIKKVEELRSK-GLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSEND 112
ST +RE ++ R++K+E LR G P+ KWD+ H + ++ + HL G + E+
Sbjct: 12 STPEREIIKQ-RMEKLERLRKDAGFNPFVIDKWDKEHKLSFVRSNFSHL--GPDEMDEDA 68
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
+ AGRV+A R GK +F+ L DD+ +QLY + L+++++ K +VD GD LG+ G
Sbjct: 69 LIKTAGRVMAIRKHGKASFVHLEDDTDRLQLYFRFD-TLNEEYEWFKKWVDTGDYLGIVG 127
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
RT++GELS+LV F +L+K+L PLP+K+HGL D + RYRQRY+D+I+ PEV +VFRK
Sbjct: 128 HPFRTKRGELSLLVTDFKLLSKALRPLPEKWHGLKDTEVRYRQRYLDLIANPEVREVFRK 187
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAKI+ R+ +ES G +EVETP+L AGGA ARPF+T+HN+LG +LYLRIATEL+LKR
Sbjct: 188 RAKIIKTFREVLESHGTLEVETPMLSPIAGGATARPFITFHNALGINLYLRIATELYLKR 247
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++G +E++YEIG+ FRNEG+ + HNPEFT +E+Y AY++Y MMN+TEEI+ CA A+
Sbjct: 248 LIVGMYERVYEIGKNFRNEGIDSMHNPEFTAMEVYWAYANYDDMMNLTEEIIVACADAM- 306
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDGLE 410
G + Y I E P+RR TM +LVKE G+DF + ++ ++AKE L G
Sbjct: 307 GSRQLPYGEHMINYEPPFRRATMVDLVKEHCGVDFLNITDEEARRIAKERGLEIKG---- 362
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
N+ + +I + E F+ VE KL+QPTFVL YP+EISPLAK + T RFE
Sbjct: 363 NESRLLI---------MTEFFDNFVEDKLIQPTFVLGYPVEISPLAKRDPDNPDFTRRFE 413
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFICG E+ANAFSEL DPLDQR R +Q+++ +E+ D V
Sbjct: 414 LFICGAEVANAFSELNDPLDQRERFLDQLKK-------------------REAGDEEAHV 454
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
D+DFVTALE+G+PP G+G+GIDRL M LTNS+SIRDVI FP ++ ++
Sbjct: 455 -FDEDFVTALEHGLPPTGGLGIGIDRLTMFLTNSSSIRDVILFPTMRPKE 503
>gi|442805836|ref|YP_007373985.1| lysine--tRNA ligase LysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741686|gb|AGC69375.1| lysine--tRNA ligase LysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 500
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/538 (45%), Positives = 339/538 (63%), Gaps = 46/538 (8%)
Query: 44 TRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLA 102
+ N S ++ + + +R +K+ +L+SKG +P+ K+D T ++ + +
Sbjct: 2 SENINHSQNTEEVQNLNEILKVRRQKLGDLQSKGKDPFKIVKYDVTQKTKEITDNFDEF- 60
Query: 103 NGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFV 162
E VS+AGR++A+R GK +F ++D G IQL+ L + +++ K +
Sbjct: 61 -------EGKEVSIAGRLMAKRGMGKTSFCDIQDRDGKIQLFVRINELGEEAYEEFKK-L 112
Query: 163 DIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIS 222
DIGDI+GV G++ +T+ GE+S+ V+ + +L KSL PLP+K+HGL D D RYRQRY+D+I
Sbjct: 113 DIGDIIGVRGTVFKTKMGEISIRVHEYTLLAKSLRPLPEKFHGLKDTDTRYRQRYLDLIV 172
Query: 223 KPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYL 282
PEV F R++I+S IR ++S GF+EVETP+L GGA ARPF+T+HN+L D+YL
Sbjct: 173 NPEVKKTFIMRSRIISAIRSFLDSRGFLEVETPILNLIPGGANARPFITHHNTLDLDMYL 232
Query: 283 RIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEE 342
RIA EL+LKR+++GG EK+YE+GR+FRNEG+S +HNPEFT +E+YEAY+DY MM +TE+
Sbjct: 233 RIAPELYLKRLIVGGMEKVYELGRMFRNEGMSVKHNPEFTLLEVYEAYTDYHGMMKLTED 292
Query: 343 IVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKE 399
+ H A V G +YQG EI L PW R TM VK+ TGIDF+ + +D + +AKE
Sbjct: 293 LYLHVADTVLGTRKFEYQGYEIDLSLPWARMTMTEAVKKYTGIDFDTIASDDEAVALAKE 352
Query: 400 TTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
L G G +LN FE VE L+QPTF++DYP+E+SPL K
Sbjct: 353 KGLDVTG-------------KTKKGEILNLFFEEFVEEHLIQPTFIMDYPVEVSPLTKRK 399
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
LTERFELFI GREMANA+SEL DP+DQ+ R Q+R KR E +
Sbjct: 400 PDKPELTERFELFIVGREMANAYSELNDPIDQKERFLAQLR----KREQGDEEAN----- 450
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE+GMPP G+G+GIDRLVML TNS SIRDV+ FP +K
Sbjct: 451 -----------MMDEDFIIALEHGMPPTGGLGVGIDRLVMLFTNSYSIRDVLLFPTMK 497
>gi|392939634|ref|ZP_10305278.1| lysyl-tRNA synthetase (class II) [Thermoanaerobacter siderophilus
SR4]
gi|392291384|gb|EIV99827.1| lysyl-tRNA synthetase (class II) [Thermoanaerobacter siderophilus
SR4]
Length = 499
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/534 (45%), Positives = 350/534 (65%), Gaps = 48/534 (8%)
Query: 50 SSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
S+ + + E LRI+ K+ LRS G+EPY +++RT+ ++ ++ Y
Sbjct: 4 SNDNIWNNTEELNELLRIRREKLNILRSMGVEPYGIDRFERTNVSSDIKNDY-------- 55
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
N E V++AGR++++RA GK +F ++D G IQ+Y + + + ++ K+ +DIGD
Sbjct: 56 ENFEGKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKI-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV+G + +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV
Sbjct: 115 IIGVTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+VF KR KI+ IR+ +++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA
Sbjct: 175 KEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIAL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ +
Sbjct: 235 ELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAY 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A VNG I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK L
Sbjct: 295 VAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDAEAVEIAKRLNLE 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+G++ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK +
Sbjct: 355 T-KEGMKK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNP 401
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T RFE FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REA 442
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 443 GDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|56418609|ref|YP_145927.1| lysyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261417575|ref|YP_003251257.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|297528449|ref|YP_003669724.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|319765233|ref|YP_004130734.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|375006885|ref|YP_004980514.1| lysyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56378451|dbj|BAD74359.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Geobacillus
kaustophilus HTA426]
gi|261374032|gb|ACX76775.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|297251701|gb|ADI25147.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|317110099|gb|ADU92591.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|359285730|gb|AEV17414.1| Lysyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 494
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/526 (45%), Positives = 349/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE +
Sbjct: 2 SHEELNDQLRVRREKLKKIEEL---GVDPFGKRFERTHKAQELFELYGDLSK-EELEEKQ 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV
Sbjct: 58 IEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDLGDIVGVR 116
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE F
Sbjct: 117 GTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFI 176
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 177 TRSLIIQSMRRYLDSRGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLK 236
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V
Sbjct: 237 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMELTENLIAHIATEV 296
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE G+DF +D +E A G+E
Sbjct: 297 LGTTKIQYGEHVVDLTPEWRRLHMVDAIKEYVGVDFWRQMSD----EEARELAKEHGVE- 351
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ + G+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFEL
Sbjct: 352 -----VAPHMTFGHIVNEFFEQKVESHLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFEL 406
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R E Q+++ ++ +D ++E
Sbjct: 407 FIVGREHANAFTELNDPIDQRQRFEAQLKER------------------EQGNDEAHE-- 446
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 447 MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|338813913|ref|ZP_08625982.1| lysyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274089|gb|EGO62657.1| lysyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 501
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 341/515 (66%), Gaps = 41/515 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ + +KG+EP+ K+ TH A + + Y L EN V +AGR+++ R
Sbjct: 23 VRLDKMAAIAAKGIEPFGRKYQATHHAQDIIDQYAAL--------ENQTVKLAGRLMSVR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F L D SG +QLY ++ +L ++ +L VDIGDI+G++G + T+KGE+SV
Sbjct: 75 GHGKASFGHLMDISGQVQLYFRQD-VLGEEAYELFHLVDIGDIIGITGVVFTTQKGEISV 133
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +F IL K+L PLP+K+HGL DV+ RYRQRY+D+I P+V F R+KI+ +R +
Sbjct: 134 KVTAFEILAKTLRPLPEKWHGLKDVETRYRQRYLDLIVNPDVRRTFILRSKIIKAVRAIL 193
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ F+EVETP++ AGGA ARPFVT+HN+L DL++RIA EL+LKR+++GGFE++YE+
Sbjct: 194 DAKDFLEVETPMMHPIAGGAAARPFVTHHNALDMDLFMRIAPELYLKRLIVGGFERVYEL 253
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S RHNPEFT +E+Y+AY+DY +M +TEE+V A V G + I YQG EI
Sbjct: 254 GRVFRNEGISIRHNPEFTIMELYQAYADYNDVMRVTEEVVAGVAQQVLGTMKITYQGQEI 313
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRA--LGDGLENKDKFVIESSPS 422
L PW R TM +K+ +DF+ + +K +E A LG E KD
Sbjct: 314 DLTPPWNRLTMSEAIKKYGNVDFD--FDTVKTIEEARAIANRLGVRFEQKD--------G 363
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
+G +LN VFE V E L+QPTF++ +P EISPLAK ++ + +T+RFE FI GREMAN F
Sbjct: 364 IGGILNNVFEAVAEEHLIQPTFIMHHPTEISPLAKRNKDNPNITDRFEAFIFGREMANGF 423
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R +QV Q + DD ++ +D+DFVTALEY
Sbjct: 424 SELNDPIDQKERFMKQVAQR------------------ESGDDEAH--MMDEDFVTALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PPA G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 464 GLPPAGGLGIGIDRLVMLLTDSYSIRDVLLFPHMR 498
>gi|448236383|ref|YP_007400441.1| lysyl-tRNA synthetase [Geobacillus sp. GHH01]
gi|445205225|gb|AGE20690.1| lysyl-tRNA synthetase [Geobacillus sp. GHH01]
Length = 494
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/526 (45%), Positives = 349/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE +
Sbjct: 2 SHEELNDQLRVRREKLKKIEEL---GVDPFGKRFERTHKAQELFELYGDLSK-EELEEKQ 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV
Sbjct: 58 IEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDLGDIVGVR 116
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE F
Sbjct: 117 GTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFI 176
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 177 TRSFIIQSMRRYLDSRGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLK 236
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V
Sbjct: 237 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMELTENLIAHIATEV 296
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE G+DF +D +E A G+E
Sbjct: 297 LGTTKIQYGEHVVDLTPEWRRLHMVDAIKEYVGVDFWRQMSD----EEARELAKEHGVE- 351
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ + G+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFEL
Sbjct: 352 -----VAPHMTFGHIVNEFFEQKVESHLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFEL 406
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R E Q+++ ++ +D ++E
Sbjct: 407 FIVGREHANAFTELNDPIDQRQRFEAQLKER------------------EQGNDEAHE-- 446
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 447 MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|167039464|ref|YP_001662449.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300915430|ref|ZP_07132743.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307725210|ref|YP_003904961.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|238687610|sp|B0K5C0.1|SYK_THEPX RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166853704|gb|ABY92113.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300888490|gb|EFK83639.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307582271|gb|ADN55670.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
Length = 499
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/534 (45%), Positives = 350/534 (65%), Gaps = 48/534 (8%)
Query: 50 SSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
S+ + + E LRI+ K+ LRS G+EPY +++RT+ ++ ++ Y
Sbjct: 4 SNDNIWNNTEELNELLRIRREKLNILRSMGIEPYGIDRFERTNVSSDIKNDY-------- 55
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
N E V++AGR++++RA GK +F ++D G IQ+Y + + + ++ K+ +DIGD
Sbjct: 56 ENFEGKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKI-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV+G + +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV
Sbjct: 115 IIGVTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+VF KR KI+ IR+ +++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA
Sbjct: 175 KEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIAL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ +
Sbjct: 235 ELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAY 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A VNG I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK L
Sbjct: 295 VAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKADAEAVEIAKRLNLE 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+G++ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK +
Sbjct: 355 T-KEGMKK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNP 401
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T RFE FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REA 442
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 443 GDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|345018592|ref|YP_004820945.1| Lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033935|gb|AEM79661.1| Lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 499
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/534 (45%), Positives = 350/534 (65%), Gaps = 48/534 (8%)
Query: 50 SSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
S+ + + E LRI+ K+ LRS G+EPY +++RT+ ++ ++ Y
Sbjct: 4 SNDNIWNNTEELNELLRIRREKLNILRSMGVEPYGIDRFERTNVSSDIKNDY-------- 55
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
N E V++AGR++++RA GK +F ++D G IQ+Y + + + ++ K+ +DIGD
Sbjct: 56 ENFEGKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYIKYDTVGEKNYEIFKI-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV+G + +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV
Sbjct: 115 IIGVTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+VF KR KI+ IR+ +++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA
Sbjct: 175 KEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIAL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ +
Sbjct: 235 ELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAY 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A VNG I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK L
Sbjct: 295 VAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDAEAVEIAKRLNLE 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+G++ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK +
Sbjct: 355 T-KEGMKK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNP 401
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T RFE FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REA 442
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 443 GDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|350565935|ref|ZP_08934655.1| lysine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
gi|348663276|gb|EGY79869.1| lysine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
Length = 630
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/511 (45%), Positives = 345/511 (67%), Gaps = 41/511 (8%)
Query: 68 KKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAF 126
+K++EL+ G +P+ K+D TH + ++++ + L E VS+AGR++++R
Sbjct: 18 EKLQELKDAGKDPFQISKFDVTHHSIEIKDNFEEL--------EEKEVSIAGRIMSKRRH 69
Query: 127 GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLV 186
GK+AFL L+D G IQ++ +K+ +L D ++ +K + DIGDI+GV G++ RTE GE++V
Sbjct: 70 GKIAFLDLQDSQGRIQIFAKKD-VLGDNYEDIKGY-DIGDIVGVVGNVFRTEAGEITVRA 127
Query: 187 NSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVES 246
++++KSL LP+K+HGL D D RYRQRYVD+I PEV D+F KR KI+ IR+ +++
Sbjct: 128 GKTLLMSKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEVKDIFLKRNKIIKSIREYLDN 187
Query: 247 LGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGR 306
G++EVETP+L AGGA ARPF+T+HN+L D+ LRIA EL LKR+++GGF+K+YE+G+
Sbjct: 188 RGYLEVETPILGTVAGGANARPFITHHNTLDLDMQLRIANELFLKRLIVGGFDKVYEMGK 247
Query: 307 IFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICL 366
+FRNEG+ TRHNPEFT IE+YEAY+DY +MM ITEEI + A+ + G +++QG EI L
Sbjct: 248 MFRNEGMDTRHNPEFTNIELYEAYADYNTMMEITEEIFENAAMTLYGTTVVNFQGKEIDL 307
Query: 367 ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNL 426
+ PWRR TM +++KE +G+DFN++ D +E A G+E IE + G +
Sbjct: 308 KAPWRRVTMIDIIKELSGVDFNQIQTD----EEAREIAKAKGVE------IEEGWTRGKI 357
Query: 427 LNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELT 486
+ E FE E L+QPTFV+ +P+E+SPL+K + +T+RFE FI G E ANAFSEL
Sbjct: 358 IAEFFEEFCEDSLIQPTFVIGHPVEVSPLSKRNVEDPRITDRFEAFINGWEFANAFSELN 417
Query: 487 DPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPP 546
DP+DQ+ R E Q+++ KE+ D +D DF+ ALE G+PP
Sbjct: 418 DPIDQKERFESQLKE-------------------KEAGDEEAH-PMDTDFINALEVGLPP 457
Query: 547 ASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+G+G+DR++MLLT+ SIRD++ FP +K
Sbjct: 458 TGGLGIGVDRMIMLLTDQPSIRDIVFFPTMK 488
>gi|229077367|ref|ZP_04210034.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
gi|228705946|gb|EEL58265.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
Length = 499
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/517 (45%), Positives = 343/517 (66%), Gaps = 34/517 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + D+++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE++V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
LE W R M + +K+ +G DF N + ++ A+E L + I+ + V
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADFWNPMS--IEEARE---------LAKEHNVEIKDTMEV 361
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+
Sbjct: 362 GHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFT 421
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYG
Sbjct: 422 ELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPP G+G+GIDRLVMLLTN+ SIRDV+ FP + +Q
Sbjct: 462 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMHHKQ 498
>gi|431387273|ref|ZP_19511636.1| lysyl-tRNA synthetase [Enterococcus faecium E1627]
gi|430580830|gb|ELB19296.1| lysyl-tRNA synthetase [Enterococcus faecium E1627]
Length = 498
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/515 (47%), Positives = 340/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLSASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF +E TL AL L K + + V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WQEMTLEEAL--ALAEKHNVEVTEAMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|452972562|gb|EME72392.1| lysyl-tRNA ligase [Bacillus sonorensis L12]
Length = 499
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 342/514 (66%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ++R G +P+ ++DR+H + +L +Y + EE + V++AGR++ +R
Sbjct: 17 VRREKMNQMRESGKDPFGQRFDRSHQSAELIGLYDKFSK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + +Q++ K D+GDI+GV+G M +T GELSV
Sbjct: 76 GKGKAGFAHIQDLQGQIQIYVRKDSVGEEQYELFKS-SDLGDIVGVTGVMFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL D+++RYRQRY+D+I P+ + F R+KI+ +R+ +
Sbjct: 135 KATSFDLLTKALRPLPDKYHGLKDIEQRYRQRYLDLIVNPDSKNTFITRSKIIQSMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 NNHGYLEVETPMMHSIPGGASARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G T+ Y ++
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMRLTENLIAHIAEEVLGTTTVQYGEHQV 314
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
L+ W+R M + VKE TG+DF E+ D E A G+E I + SV
Sbjct: 315 ELKPEWKRLHMVDAVKELTGVDFWKEVSVD-----EAKAYAKEHGVE------ITENMSV 363
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 364 GHIINEFFEQKVEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 423
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q+++ +E +D ++ +D+DFV ALEYG
Sbjct: 424 ELNDPIDQKERFEAQLKER------------------EEGNDEAH--MMDEDFVEALEYG 463
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 464 MPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMR 497
>gi|375091687|ref|ZP_09737975.1| lysine-tRNA ligase [Helcococcus kunzii ATCC 51366]
gi|374562574|gb|EHR33901.1| lysine-tRNA ligase [Helcococcus kunzii ATCC 51366]
Length = 638
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/516 (47%), Positives = 339/516 (65%), Gaps = 42/516 (8%)
Query: 65 LRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
L+IK K+ +L+++G P+ K D A + ++N EE E V VAGR++
Sbjct: 10 LQIKRDKLTQLKNEGKNPHLIEKVDVDTKAIDI------VSNFEEF--EGKEVKVAGRIL 61
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
+R+FGK+ F+ L+DDS IQ++ + L +++ +LK +D GDI SG + +T+ GE
Sbjct: 62 GKRSFGKIGFIVLQDDSSKIQIFNRHDTLGEEKYQELKN-LDTGDIATFSGEVIKTQTGE 120
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+SVL F +LTKSL LP+K+HGL DVD RYRQRYVD+I PEV DVFRKR KI+S IR
Sbjct: 121 ISVLTKEFQLLTKSLQILPEKFHGLKDVDLRYRQRYVDLIVNPEVKDVFRKRTKILSAIR 180
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ F+EVETP+L AGGA ARPFVT+HN+L D+YLRIA EL+LKR+++GGF+K+
Sbjct: 181 EFLDNRDFLEVETPILNTIAGGATARPFVTHHNTLDIDMYLRIANELYLKRLIVGGFDKV 240
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GR+FRNEG+ HNPE+T IE+YEAY+DY MM +TE +V VNG T+DYQG
Sbjct: 241 YEMGRMFRNEGMDATHNPEYTAIELYEAYADYNDMMELTENLVLSVNQKVNGSNTVDYQG 300
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+EI PW+R TM + +KE TGIDFN + D + AK+ L + K I+ +
Sbjct: 301 IEIDFTTPWKRITMVDAIKEETGIDFNNI-TDFEEAKK---------LAQEHKLEIKETD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+GN++ FE VE KL+QPTFV YP+EISPL K + + +T+RFE FI G+E+ANA
Sbjct: 351 KLGNIIVAFFEEYVEDKLIQPTFVTQYPVEISPLTKRNPENPSMTQRFEAFIYGKEIANA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D DQ R E+Q+R L+E+ D + +D DF+ A+E
Sbjct: 411 YSELNDAEDQSERFEDQMR-------------------LREAGDEEANL-IDYDFINAIE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GM P GMG+GIDRLVM LTN +IRDV+ FP +K
Sbjct: 451 VGMAPTGGMGMGIDRLVMFLTNQTTIRDVLLFPTMK 486
>gi|205371965|ref|ZP_03224783.1| lysyl-tRNA synthetase [Bacillus coahuilensis m4-4]
Length = 498
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/515 (46%), Positives = 342/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+E LR+ G +P+ +++RTH + ++ Y + +E +N V++AGR++ +R
Sbjct: 15 VRRDKMESLRASGKDPFGKRFERTHLSEDIKTQYADIEK-DELEEKNASVAIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQLY ++ + + ++ K D+GD++GV+G++ +T+ GELS+
Sbjct: 74 GKGKAGFTHIQDLTGQIQLYVRQDAVGEEAYELFKQ-ADLGDLVGVAGTVFKTKVGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF +LTK+L PLP+KYHGL DV++RYRQRY+D+I+ E + F R++I+ +R+ +
Sbjct: 133 KVTSFELLTKALRPLPEKYHGLKDVEQRYRQRYLDLITNQESRETFIARSRIIQSMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP++ AGGA ARPF T+HN+L L++RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DSNGYLEVETPMMHSIAGGASARPFTTHHNALDMPLFMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G T+ Y +
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMELTENLVAHIAQEVLGTTTVPYGDYSV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSPS 422
L W R M + VKE TG+DF K + RAL G+E KD
Sbjct: 313 ELAPKWTRLHMVDAVKEHTGVDF------WKEMTDEEARALAKEHGIEIKDTM------Q 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF
Sbjct: 361 YGHVVNEFFEQRVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVGREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E Q+++ +E +D ++ +DDDF+ ALEY
Sbjct: 421 TELNDPIDQRERFEAQLKER------------------EEGNDEAH--MMDDDFIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 495
>gi|256751868|ref|ZP_05492740.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749275|gb|EEU62307.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 499
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/534 (45%), Positives = 351/534 (65%), Gaps = 48/534 (8%)
Query: 50 SSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
S+ + + E LRI+ K+ LRS G+EPY +++RT+ ++ ++ Y
Sbjct: 4 SNDNIWNNTEELNELLRIRREKLNILRSMGIEPYGIDRFERTNLSSDIKNDY-------- 55
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
N E V++AGR++++R+ GK +F ++D G IQ+Y + + + ++ K+ +DIGD
Sbjct: 56 ENFEGKVVTLAGRIMSKRSHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKI-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV+G + +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV
Sbjct: 115 IIGVTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+VF KR KI+ IR+ +++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA
Sbjct: 175 KEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIAL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ +
Sbjct: 235 ELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAY 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A VNG I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK+ L
Sbjct: 295 VAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDEEAIEIAKKLNLE 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+G++ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK +
Sbjct: 355 T-KEGMKK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNP 401
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T RFE FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REA 442
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 443 GDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|427394355|ref|ZP_18887792.1| lysyl-tRNA synthetase [Alloiococcus otitis ATCC 51267]
gi|425730044|gb|EKU92891.1| lysyl-tRNA synthetase [Alloiococcus otitis ATCC 51267]
Length = 504
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/531 (44%), Positives = 347/531 (65%), Gaps = 38/531 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS 109
++S+ +T + +R +K++ L KGL+P+ K+DRT ++Q+ Y + EE
Sbjct: 5 NTSNQNTENLNDQMLVRQEKMKNLADKGLDPFGSKFDRTDYSDQIIRDYESFSK-EELQE 63
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILG 169
++ HV++AGR++++R GK F L+D +G +Q+Y ++ + D ++ K D+GD +G
Sbjct: 64 KDSHVTIAGRIMSKRGKGKAGFAHLKDKNGQVQIYVRQDEIGEDDYEIYKS-ADLGDFIG 122
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
+SG + +T GE++V F L+K+L PLPDKYHGLTDV+++YR+RY+D+I+ D
Sbjct: 123 ISGRIMKTNTGEVTVRAQEFTHLSKALRPLPDKYHGLTDVEQKYRKRYLDLIANEASLDR 182
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
F+KR++I+S IRK ++ LG++EVETP L AGGA ARPF+T+HN+L DLYLRIA ELH
Sbjct: 183 FKKRSQIISAIRKHMDGLGYLEVETPFLHNQAGGAAARPFITHHNALNTDLYLRIALELH 242
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GG EK+YEIGR+FRNEG+ HNPEFT +E+Y AY DY +M++TE+++ A
Sbjct: 243 LKRLIVGGMEKVYEIGRVFRNEGIDATHNPEFTMLEVYTAYQDYWDVMDLTEDLIRSVAQ 302
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDF-NELGNDL--KVAKETTLRALG 406
V G I+Y I LE W R+ M +L+KE TG+DF E+ +D ++AK+ +
Sbjct: 303 DVKGTTVIEYGDETINLEEKWDRKHMVDLIKEETGVDFWQEMTDDQARQIAKDHQVE--- 359
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
+E G+++NE FE VE KL QPTFV +P ISPLAK + T
Sbjct: 360 ----------VEDYAEYGHVVNEFFEQFVEDKLRQPTFVYGHPTAISPLAKKNPEDGRFT 409
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
+RFELFI G E NAF+EL DP+DQR R E QV+ E++A +D
Sbjct: 410 DRFELFIAGHEYGNAFTELNDPIDQRERFEAQVK---ERQAG---------------NDE 451
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++EV D+D++ ++EYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 452 AHEV--DEDYLESMEYGMPPTGGLGIGIDRLVMLLTDAHTIRDVVLFPTMK 500
>gi|260655067|ref|ZP_05860555.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844913|ref|ZP_18269524.1| lysyl-tRNA synthetase (class II) [Jonquetella anthropi DSM 22815]
gi|260630178|gb|EEX48372.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363986351|gb|EHM13181.1| lysyl-tRNA synthetase (class II) [Jonquetella anthropi DSM 22815]
Length = 507
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/527 (47%), Positives = 346/527 (65%), Gaps = 36/527 (6%)
Query: 56 TSDREAVRALRIKKVEELRSK-GLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDH 113
T+D E VR R+ K+ L + G PY KW+ TH+A + E Y L E E+
Sbjct: 9 TADTEIVRQ-RLDKLRRLNEEEGYNPYKPEKWNVTHTAQAVAETYGALE--PEQADESAA 65
Query: 114 VSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGS 173
+S+AGRV+ R GKLAF L+D++GTIQ+Y + L +++ K ++D GDI+G+ G
Sbjct: 66 LSMAGRVMTIRRQGKLAFAHLQDETGTIQIYFQLNALGEKEYEFFKKWIDTGDIIGLCGH 125
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
RT++GEL+V V SF +L+K+L PLP+K+HGL+D++ RYR+RYVD+I+ PEV DVFR+R
Sbjct: 126 PFRTKRGELTVAVKSFQLLSKALRPLPEKWHGLSDMEVRYRKRYVDLIANPEVRDVFRRR 185
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A I++ R T+ES G +EVETPVL AGGA ARPF+T+HN+L D+YLRIA EL KR+
Sbjct: 186 AAIITSFRSTLESHGTLEVETPVLSYLAGGANARPFITHHNALDMDMYLRIAVELFHKRL 245
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++G ++YEIG+ FRNEG+ HNPEFT +E+Y Y DY+ MMN+TEE++ + A+A NG
Sbjct: 246 VVGMMGRVYEIGKNFRNEGMDLMHNPEFTMMEVYWPYCDYEVMMNLTEELIRNAAVASNG 305
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
K I++QG + E P+RR +M LVKE TG+DF+ L D + KE R GLE
Sbjct: 306 KAKIEWQGTSLDFESPFRRASMVELVKEHTGVDFSSL-TDEEARKEAASR----GLE--- 357
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
++ + S +L E E VE +L+QPTFV +P+EISPLAK + T RFELF
Sbjct: 358 ---VKPTDSRFKILTEFMEEFVEDQLIQPTFVTGHPVEISPLAKKDPLNPDYTHRFELFC 414
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
CG+E+AN +SEL DP+DQ+AR +Q+++ +E E + H Y D
Sbjct: 415 CGKELANGYSELNDPVDQKARFIDQMKKKSE----------------GEDETHPY----D 454
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
DFV ALE G+PP G+G+G+DR++M LTNS SIRDVI FP +K Q
Sbjct: 455 ADFVEALEQGLPPTGGLGIGMDRVIMFLTNSKSIRDVIFFPTMKPLQ 501
>gi|257879864|ref|ZP_05659517.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|294618638|ref|ZP_06698177.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
gi|424859962|ref|ZP_18283937.1| lysine--tRNA ligase [Enterococcus faecium R499]
gi|424960804|ref|ZP_18375285.1| lysine--tRNA ligase [Enterococcus faecium P1986]
gi|424965069|ref|ZP_18379096.1| lysine--tRNA ligase [Enterococcus faecium P1190]
gi|424974703|ref|ZP_18387920.1| lysine--tRNA ligase [Enterococcus faecium P1137]
gi|424979733|ref|ZP_18392567.1| lysine--tRNA ligase [Enterococcus faecium ERV99]
gi|425020421|ref|ZP_18430726.1| lysine--tRNA ligase [Enterococcus faecium C497]
gi|425030225|ref|ZP_18435419.1| lysine--tRNA ligase [Enterococcus faecium C1904]
gi|425053684|ref|ZP_18457214.1| lysine--tRNA ligase [Enterococcus faecium 506]
gi|431668806|ref|ZP_19524168.1| lysyl-tRNA synthetase [Enterococcus faecium E1904]
gi|431756215|ref|ZP_19544853.1| lysyl-tRNA synthetase [Enterococcus faecium E2883]
gi|257814092|gb|EEV42850.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|291595157|gb|EFF26495.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
gi|402926040|gb|EJX46108.1| lysine--tRNA ligase [Enterococcus faecium R499]
gi|402944949|gb|EJX63328.1| lysine--tRNA ligase [Enterococcus faecium P1190]
gi|402945741|gb|EJX64072.1| lysine--tRNA ligase [Enterococcus faecium P1986]
gi|402955660|gb|EJX73171.1| lysine--tRNA ligase [Enterococcus faecium P1137]
gi|402968175|gb|EJX84669.1| lysine--tRNA ligase [Enterococcus faecium ERV99]
gi|403003804|gb|EJY17659.1| lysine--tRNA ligase [Enterococcus faecium C1904]
gi|403009227|gb|EJY22686.1| lysine--tRNA ligase [Enterococcus faecium C497]
gi|403029344|gb|EJY41105.1| lysine--tRNA ligase [Enterococcus faecium 506]
gi|430599972|gb|ELB37654.1| lysyl-tRNA synthetase [Enterococcus faecium E1904]
gi|430615670|gb|ELB52614.1| lysyl-tRNA synthetase [Enterococcus faecium E2883]
Length = 498
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/515 (47%), Positives = 340/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKTGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF +E TL AL L K + + V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WQEMTLEEAL--ALAEKHNVEVTEAMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|333373061|ref|ZP_08464979.1| lysine--tRNA ligase [Desmospora sp. 8437]
gi|332970948|gb|EGK09922.1| lysine--tRNA ligase [Desmospora sp. 8437]
Length = 499
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/517 (46%), Positives = 348/517 (67%), Gaps = 36/517 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ LR +G++P+ K++RT +A + + + L+ EE + V +AGR+VA+R
Sbjct: 16 VRRDKLNTLRERGIDPFGRKFERTDTARGILDAFDALSK-EEIEEKQQAVVIAGRLVAKR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F L+D +G IQ+Y K+ + + ++ D+GD LG+SG + +T +GE SV
Sbjct: 75 KQGKASFAHLQDQTGRIQIYVRKDEVGEEDYETFST-ADLGDWLGISGIVFKTNRGETSV 133
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGL DV+ RYR+RY+D+I PEV + F R++I+S IR+ +
Sbjct: 134 KAAELTFLSKSLRPLPEKFHGLKDVELRYRKRYLDLIMNPEVKNTFITRSRIISTIRRYL 193
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP L GGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 194 DGRGYLEVETPTLHNIPGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGIEKVYEI 253
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR++RNEG+STRHNPEFT +E+YEA++D+ +M++TE+++TH A V G T+ Y +
Sbjct: 254 GRVYRNEGISTRHNPEFTMLELYEAFADFHDIMDLTEQLITHVAREVLGSDTLRYGEHTV 313
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV- 423
L +PW R+ M +LVKE TGIDF + +D + R+L ++ +E P +
Sbjct: 314 ELGKPWARKHMVDLVKEHTGIDFWQGVSDEEA------RSLA------REYGVELKPGMT 361
Query: 424 -GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++NE FE VE KL+QPTFV +P+EISPLA+ + + T+RFELFI GRE ANAF
Sbjct: 362 FGHIVNEFFEQKVEEKLIQPTFVYGHPVEISPLARKNEKDPRFTDRFELFIVGREHANAF 421
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DPLDQR R E QVR EKS + +D ++ +D+DF+ ALEY
Sbjct: 422 TELNDPLDQRERFEAQVR-----------EKS-------QGNDEAH--PMDEDFLEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRLVMLLT+SASIRDV+ FP L+ Q
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDSASIRDVLLFPTLREQ 498
>gi|257882590|ref|ZP_05662243.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257886012|ref|ZP_05665665.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257891705|ref|ZP_05671358.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257894180|ref|ZP_05673833.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|260559536|ref|ZP_05831717.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
gi|261206687|ref|ZP_05921385.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289565049|ref|ZP_06445503.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|293553702|ref|ZP_06674326.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
gi|293563203|ref|ZP_06677659.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
gi|293570125|ref|ZP_06681205.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
gi|294614890|ref|ZP_06694781.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
gi|294623714|ref|ZP_06702547.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
gi|314938205|ref|ZP_07845505.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|314943100|ref|ZP_07849899.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|314949297|ref|ZP_07852640.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
gi|314952230|ref|ZP_07855245.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|314992088|ref|ZP_07857538.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|314996271|ref|ZP_07861327.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|383329910|ref|YP_005355794.1| lysyl-tRNA synthetase [Enterococcus faecium Aus0004]
gi|389869724|ref|YP_006377147.1| lysine--tRNA ligase [Enterococcus faecium DO]
gi|406581115|ref|ZP_11056289.1| lysyl-tRNA synthetase [Enterococcus sp. GMD4E]
gi|406581793|ref|ZP_11056928.1| lysyl-tRNA synthetase [Enterococcus sp. GMD3E]
gi|406584245|ref|ZP_11059280.1| lysyl-tRNA synthetase [Enterococcus sp. GMD2E]
gi|406589684|ref|ZP_11064111.1| lysyl-tRNA synthetase [Enterococcus sp. GMD1E]
gi|410937621|ref|ZP_11369480.1| lysine--tRNA ligase [Enterococcus sp. GMD5E]
gi|415895924|ref|ZP_11550715.1| lysyl-tRNA synthetase [Enterococcus faecium E4453]
gi|416132462|ref|ZP_11597915.1| lysyl-tRNA synthetase [Enterococcus faecium E4452]
gi|424789599|ref|ZP_18216244.1| lysine--tRNA ligase [Enterococcus faecium V689]
gi|424797383|ref|ZP_18222981.1| lysine--tRNA ligase [Enterococcus faecium S447]
gi|424847966|ref|ZP_18272503.1| lysine--tRNA ligase [Enterococcus faecium R501]
gi|424866357|ref|ZP_18290197.1| lysine--tRNA ligase [Enterococcus faecium R497]
gi|424952126|ref|ZP_18367164.1| lysine--tRNA ligase [Enterococcus faecium R496]
gi|424954004|ref|ZP_18368927.1| lysine--tRNA ligase [Enterococcus faecium R494]
gi|424957040|ref|ZP_18371792.1| lysine--tRNA ligase [Enterococcus faecium R446]
gi|424967601|ref|ZP_18381294.1| lysine--tRNA ligase [Enterococcus faecium P1140]
gi|424970920|ref|ZP_18384394.1| lysine--tRNA ligase [Enterococcus faecium P1139]
gi|424977486|ref|ZP_18390497.1| lysine--tRNA ligase [Enterococcus faecium P1123]
gi|424985866|ref|ZP_18398323.1| lysine--tRNA ligase [Enterococcus faecium ERV69]
gi|424986878|ref|ZP_18399280.1| lysine--tRNA ligase [Enterococcus faecium ERV38]
gi|424989919|ref|ZP_18402161.1| lysine--tRNA ligase [Enterococcus faecium ERV26]
gi|424995143|ref|ZP_18407040.1| lysine--tRNA ligase [Enterococcus faecium ERV168]
gi|424999134|ref|ZP_18410774.1| lysine--tRNA ligase [Enterococcus faecium ERV165]
gi|425001053|ref|ZP_18412589.1| lysine--tRNA ligase [Enterococcus faecium ERV161]
gi|425004996|ref|ZP_18416279.1| lysine--tRNA ligase [Enterococcus faecium ERV102]
gi|425006984|ref|ZP_18418136.1| lysine--tRNA ligase [Enterococcus faecium ERV1]
gi|425011315|ref|ZP_18422224.1| lysine--tRNA ligase [Enterococcus faecium E422]
gi|425012943|ref|ZP_18423700.1| lysine--tRNA ligase [Enterococcus faecium E417]
gi|425017665|ref|ZP_18428161.1| lysine--tRNA ligase [Enterococcus faecium C621]
gi|425033007|ref|ZP_18438010.1| lysine--tRNA ligase [Enterococcus faecium 515]
gi|425036380|ref|ZP_18441143.1| lysine--tRNA ligase [Enterococcus faecium 514]
gi|425038392|ref|ZP_18443010.1| lysine--tRNA ligase [Enterococcus faecium 513]
gi|425041993|ref|ZP_18446365.1| lysine--tRNA ligase [Enterococcus faecium 511]
gi|425046792|ref|ZP_18450780.1| lysine--tRNA ligase [Enterococcus faecium 510]
gi|425048021|ref|ZP_18451946.1| lysine--tRNA ligase [Enterococcus faecium 509]
gi|425059167|ref|ZP_18462517.1| lysine--tRNA ligase [Enterococcus faecium 504]
gi|425061493|ref|ZP_18464719.1| lysine--tRNA ligase [Enterococcus faecium 503]
gi|427397640|ref|ZP_18890122.1| lysyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
gi|430821502|ref|ZP_19440109.1| lysyl-tRNA synthetase [Enterococcus faecium E0045]
gi|430824339|ref|ZP_19442903.1| lysyl-tRNA synthetase [Enterococcus faecium E0120]
gi|430827204|ref|ZP_19445368.1| lysyl-tRNA synthetase [Enterococcus faecium E0164]
gi|430830018|ref|ZP_19448087.1| lysyl-tRNA synthetase [Enterococcus faecium E0269]
gi|430832579|ref|ZP_19450622.1| lysyl-tRNA synthetase [Enterococcus faecium E0333]
gi|430835086|ref|ZP_19453085.1| lysyl-tRNA synthetase [Enterococcus faecium E0679]
gi|430837150|ref|ZP_19455125.1| lysyl-tRNA synthetase [Enterococcus faecium E0680]
gi|430839936|ref|ZP_19457872.1| lysyl-tRNA synthetase [Enterococcus faecium E0688]
gi|430845374|ref|ZP_19463268.1| lysyl-tRNA synthetase [Enterococcus faecium E1050]
gi|430847167|ref|ZP_19465014.1| lysyl-tRNA synthetase [Enterococcus faecium E1133]
gi|430851345|ref|ZP_19469095.1| lysyl-tRNA synthetase [Enterococcus faecium E1185]
gi|430854037|ref|ZP_19471759.1| lysyl-tRNA synthetase [Enterococcus faecium E1258]
gi|430859218|ref|ZP_19476833.1| lysyl-tRNA synthetase [Enterococcus faecium E1552]
gi|430861016|ref|ZP_19478608.1| lysyl-tRNA synthetase [Enterococcus faecium E1573]
gi|430867745|ref|ZP_19482643.1| lysyl-tRNA synthetase [Enterococcus faecium E1574]
gi|430906603|ref|ZP_19485038.1| lysyl-tRNA synthetase [Enterococcus faecium E1575]
gi|430964149|ref|ZP_19487597.1| lysyl-tRNA synthetase [Enterococcus faecium E1576]
gi|431014822|ref|ZP_19490364.1| lysyl-tRNA synthetase [Enterococcus faecium E1578]
gi|431216478|ref|ZP_19501229.1| lysyl-tRNA synthetase [Enterococcus faecium E1620]
gi|431239313|ref|ZP_19503616.1| lysyl-tRNA synthetase [Enterococcus faecium E1622]
gi|431265336|ref|ZP_19506038.1| lysyl-tRNA synthetase [Enterococcus faecium E1623]
gi|431312227|ref|ZP_19508877.1| lysyl-tRNA synthetase [Enterococcus faecium E1626]
gi|431449136|ref|ZP_19513977.1| lysyl-tRNA synthetase [Enterococcus faecium E1630]
gi|431512513|ref|ZP_19515940.1| lysyl-tRNA synthetase [Enterococcus faecium E1634]
gi|431560965|ref|ZP_19519597.1| lysyl-tRNA synthetase [Enterococcus faecium E1731]
gi|431744844|ref|ZP_19533710.1| lysyl-tRNA synthetase [Enterococcus faecium E2071]
gi|431747464|ref|ZP_19536258.1| lysyl-tRNA synthetase [Enterococcus faecium E2134]
gi|431749963|ref|ZP_19538693.1| lysyl-tRNA synthetase [Enterococcus faecium E2297]
gi|431761127|ref|ZP_19549714.1| lysyl-tRNA synthetase [Enterococcus faecium E3346]
gi|431766067|ref|ZP_19554563.1| lysyl-tRNA synthetase [Enterococcus faecium E4215]
gi|431768645|ref|ZP_19557079.1| lysyl-tRNA synthetase [Enterococcus faecium E1321]
gi|431774650|ref|ZP_19562955.1| lysyl-tRNA synthetase [Enterococcus faecium E2369]
gi|431777764|ref|ZP_19566015.1| lysyl-tRNA synthetase [Enterococcus faecium E2560]
gi|431780460|ref|ZP_19568639.1| lysyl-tRNA synthetase [Enterococcus faecium E4389]
gi|431783138|ref|ZP_19571260.1| lysyl-tRNA synthetase [Enterococcus faecium E6012]
gi|431784094|ref|ZP_19572139.1| lysyl-tRNA synthetase [Enterococcus faecium E6045]
gi|447913796|ref|YP_007395208.1| Lysyl-tRNA synthetase (class II) [Enterococcus faecium NRRL B-2354]
gi|257818248|gb|EEV45576.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257821868|gb|EEV48998.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257828065|gb|EEV54691.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257830559|gb|EEV57166.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|260074635|gb|EEW62956.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
gi|260079180|gb|EEW66873.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289163256|gb|EFD11102.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|291587497|gb|EFF19381.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
gi|291592176|gb|EFF23794.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
gi|291596929|gb|EFF28147.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
gi|291602277|gb|EFF32505.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
gi|291604853|gb|EFF34331.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
gi|313589515|gb|EFR68360.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|313593302|gb|EFR72147.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|313595625|gb|EFR74470.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|313598159|gb|EFR77004.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|313642401|gb|EFS06981.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|313644303|gb|EFS08883.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
gi|364091312|gb|EHM33795.1| lysyl-tRNA synthetase [Enterococcus faecium E4453]
gi|364093297|gb|EHM35580.1| lysyl-tRNA synthetase [Enterococcus faecium E4452]
gi|378939604|gb|AFC64676.1| Lysyl-tRNA synthetase [Enterococcus faecium Aus0004]
gi|388534973|gb|AFK60165.1| lysine--tRNA ligase [Enterococcus faecium DO]
gi|402918615|gb|EJX39287.1| lysine--tRNA ligase [Enterococcus faecium R501]
gi|402921230|gb|EJX41689.1| lysine--tRNA ligase [Enterococcus faecium S447]
gi|402921875|gb|EJX42293.1| lysine--tRNA ligase [Enterococcus faecium V689]
gi|402927733|gb|EJX47668.1| lysine--tRNA ligase [Enterococcus faecium R496]
gi|402937789|gb|EJX56861.1| lysine--tRNA ligase [Enterococcus faecium R494]
gi|402938837|gb|EJX57810.1| lysine--tRNA ligase [Enterococcus faecium R497]
gi|402944672|gb|EJX63070.1| lysine--tRNA ligase [Enterococcus faecium R446]
gi|402954091|gb|EJX71746.1| lysine--tRNA ligase [Enterococcus faecium P1140]
gi|402960413|gb|EJX77557.1| lysine--tRNA ligase [Enterococcus faecium P1139]
gi|402964949|gb|EJX81697.1| lysine--tRNA ligase [Enterococcus faecium ERV69]
gi|402965766|gb|EJX82456.1| lysine--tRNA ligase [Enterococcus faecium P1123]
gi|402975707|gb|EJX91647.1| lysine--tRNA ligase [Enterococcus faecium ERV38]
gi|402978042|gb|EJX93807.1| lysine--tRNA ligase [Enterococcus faecium ERV168]
gi|402980092|gb|EJX95721.1| lysine--tRNA ligase [Enterococcus faecium ERV165]
gi|402980841|gb|EJX96421.1| lysine--tRNA ligase [Enterococcus faecium ERV26]
gi|402987665|gb|EJY02712.1| lysine--tRNA ligase [Enterococcus faecium ERV161]
gi|402988037|gb|EJY03066.1| lysine--tRNA ligase [Enterococcus faecium ERV102]
gi|402995971|gb|EJY10383.1| lysine--tRNA ligase [Enterococcus faecium ERV1]
gi|402997480|gb|EJY11801.1| lysine--tRNA ligase [Enterococcus faecium E422]
gi|403002282|gb|EJY16275.1| lysine--tRNA ligase [Enterococcus faecium E417]
gi|403003873|gb|EJY17722.1| lysine--tRNA ligase [Enterococcus faecium C621]
gi|403011414|gb|EJY24724.1| lysine--tRNA ligase [Enterococcus faecium 515]
gi|403015015|gb|EJY27963.1| lysine--tRNA ligase [Enterococcus faecium 514]
gi|403019639|gb|EJY32226.1| lysine--tRNA ligase [Enterococcus faecium 513]
gi|403023129|gb|EJY35415.1| lysine--tRNA ligase [Enterococcus faecium 510]
gi|403025015|gb|EJY37127.1| lysine--tRNA ligase [Enterococcus faecium 511]
gi|403031747|gb|EJY43337.1| lysine--tRNA ligase [Enterococcus faecium 509]
gi|403036232|gb|EJY47589.1| lysine--tRNA ligase [Enterococcus faecium 504]
gi|403041241|gb|EJY52269.1| lysine--tRNA ligase [Enterococcus faecium 503]
gi|404453048|gb|EKA00160.1| lysyl-tRNA synthetase [Enterococcus sp. GMD4E]
gi|404458981|gb|EKA05354.1| lysyl-tRNA synthetase [Enterococcus sp. GMD3E]
gi|404464435|gb|EKA09976.1| lysyl-tRNA synthetase [Enterococcus sp. GMD2E]
gi|404470436|gb|EKA15069.1| lysyl-tRNA synthetase [Enterococcus sp. GMD1E]
gi|410733754|gb|EKQ75676.1| lysine--tRNA ligase [Enterococcus sp. GMD5E]
gi|425721951|gb|EKU84851.1| lysyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
gi|430438418|gb|ELA48852.1| lysyl-tRNA synthetase [Enterococcus faecium E0045]
gi|430441354|gb|ELA51469.1| lysyl-tRNA synthetase [Enterococcus faecium E0120]
gi|430444384|gb|ELA54239.1| lysyl-tRNA synthetase [Enterococcus faecium E0164]
gi|430479336|gb|ELA56592.1| lysyl-tRNA synthetase [Enterococcus faecium E0269]
gi|430479865|gb|ELA57075.1| lysyl-tRNA synthetase [Enterococcus faecium E0333]
gi|430484754|gb|ELA61716.1| lysyl-tRNA synthetase [Enterococcus faecium E0679]
gi|430487580|gb|ELA64300.1| lysyl-tRNA synthetase [Enterococcus faecium E0680]
gi|430490176|gb|ELA66718.1| lysyl-tRNA synthetase [Enterococcus faecium E0688]
gi|430495779|gb|ELA71915.1| lysyl-tRNA synthetase [Enterococcus faecium E1050]
gi|430534307|gb|ELA74768.1| lysyl-tRNA synthetase [Enterococcus faecium E1185]
gi|430537840|gb|ELA78155.1| lysyl-tRNA synthetase [Enterococcus faecium E1133]
gi|430539714|gb|ELA79954.1| lysyl-tRNA synthetase [Enterococcus faecium E1258]
gi|430544060|gb|ELA84105.1| lysyl-tRNA synthetase [Enterococcus faecium E1552]
gi|430550132|gb|ELA89941.1| lysyl-tRNA synthetase [Enterococcus faecium E1574]
gi|430550605|gb|ELA90388.1| lysyl-tRNA synthetase [Enterococcus faecium E1573]
gi|430554561|gb|ELA94163.1| lysyl-tRNA synthetase [Enterococcus faecium E1575]
gi|430555210|gb|ELA94754.1| lysyl-tRNA synthetase [Enterococcus faecium E1576]
gi|430559646|gb|ELA98994.1| lysyl-tRNA synthetase [Enterococcus faecium E1578]
gi|430569843|gb|ELB08823.1| lysyl-tRNA synthetase [Enterococcus faecium E1620]
gi|430571920|gb|ELB10792.1| lysyl-tRNA synthetase [Enterococcus faecium E1622]
gi|430576171|gb|ELB14840.1| lysyl-tRNA synthetase [Enterococcus faecium E1623]
gi|430579176|gb|ELB17712.1| lysyl-tRNA synthetase [Enterococcus faecium E1626]
gi|430585528|gb|ELB23813.1| lysyl-tRNA synthetase [Enterococcus faecium E1630]
gi|430586432|gb|ELB24689.1| lysyl-tRNA synthetase [Enterococcus faecium E1634]
gi|430589806|gb|ELB27906.1| lysyl-tRNA synthetase [Enterococcus faecium E1731]
gi|430605004|gb|ELB42426.1| lysyl-tRNA synthetase [Enterococcus faecium E2071]
gi|430606291|gb|ELB43649.1| lysyl-tRNA synthetase [Enterococcus faecium E2134]
gi|430610914|gb|ELB48044.1| lysyl-tRNA synthetase [Enterococcus faecium E2297]
gi|430622501|gb|ELB59222.1| lysyl-tRNA synthetase [Enterococcus faecium E3346]
gi|430627137|gb|ELB63654.1| lysyl-tRNA synthetase [Enterococcus faecium E4215]
gi|430628867|gb|ELB65297.1| lysyl-tRNA synthetase [Enterococcus faecium E1321]
gi|430633535|gb|ELB69690.1| lysyl-tRNA synthetase [Enterococcus faecium E2369]
gi|430639057|gb|ELB74948.1| lysyl-tRNA synthetase [Enterococcus faecium E2560]
gi|430639872|gb|ELB75727.1| lysyl-tRNA synthetase [Enterococcus faecium E4389]
gi|430645811|gb|ELB81313.1| lysyl-tRNA synthetase [Enterococcus faecium E6012]
gi|430650135|gb|ELB85489.1| lysyl-tRNA synthetase [Enterococcus faecium E6045]
gi|445189505|gb|AGE31147.1| Lysyl-tRNA synthetase (class II) [Enterococcus faecium NRRL B-2354]
Length = 498
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/515 (47%), Positives = 340/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF +E TL AL L K + + V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WQEMTLEEAL--ALAEKHNVEVTEAMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|390934066|ref|YP_006391571.1| lysyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569567|gb|AFK85972.1| Lysyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 506
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/517 (46%), Positives = 340/517 (65%), Gaps = 46/517 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K++ELR+ G+EPY K++RT+ + ++ Y E V++AGR++++
Sbjct: 19 IRRSKLDELRNLGIEPYGIDKFERTNMTSDIKNDYDKF--------EGKTVTIAGRIMSK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F ++D G IQLY + + L ++ K+ +DIGDI+GV+G + +++ GE++
Sbjct: 71 RGHGKASFADIQDRDGRIQLYFKMDVLGEKNYEIFKI-LDIGDIIGVTGEVFKSKTGEVT 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +L+KSL LPDK+HGL D D RYRQRYVD+I P V + F KR I+ IR+
Sbjct: 130 IRVQDFKLLSKSLQILPDKWHGLKDPDLRYRQRYVDLIINPSVKETFIKRTAIIKAIREF 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR+++GG EK+YE
Sbjct: 190 LDNRGFIEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM+ITE + + A VNG I YQG E
Sbjct: 250 MGRVFRNEGMDIRHNPEFTLLELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIIYQGTE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I L PWRR TM + +KE IDF+++ +D +++AK L + DG++
Sbjct: 310 IDLTPPWRRLTMIDAIKEFLDIDFDKVSSDEEAVEIAKRHHLE-VKDGMKK--------- 359
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++ VF+ + E L+QPTF++DYP+EISPLAK + LT RFE FI GRE+AN
Sbjct: 360 ---GDVIALVFDELCESHLIQPTFIIDYPVEISPLAKRKHDNPALTSRFEAFIYGREIAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R EQ++Q R A E +DDDF+ AL
Sbjct: 417 AFSELNDPIDQKERFIEQLKQ----REAGNDEAH----------------MMDDDFINAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+GIDRL+M +T++ SIRDVI FP +K
Sbjct: 457 EVGMPPTGGLGIGIDRLIMFMTDAYSIRDVILFPTMK 493
>gi|423456708|ref|ZP_17433558.1| lysyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|423471725|ref|ZP_17448469.1| lysyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|401128455|gb|EJQ36145.1| lysyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|402430823|gb|EJV62897.1| lysyl-tRNA synthetase [Bacillus cereus BAG6O-2]
Length = 499
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/518 (45%), Positives = 343/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKAITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KVTGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +K+ +G DF N + V A+E L + I+++
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEARE---------LAKEHNVEIKNTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|257871360|ref|ZP_05651013.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
gi|357051455|ref|ZP_09112644.1| lysyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
gi|257805524|gb|EEV34346.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
gi|355379751|gb|EHG26903.1| lysyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
Length = 497
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/514 (46%), Positives = 342/514 (66%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR +G++P+ +++RTH++ +L E++ EE N SVAGR+V +R
Sbjct: 17 VRREKMEKLREEGIDPFGKRFERTHNSAELHELFDQRTK-EELTEMNLSASVAGRMVTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GVSG + +T+ GE+++
Sbjct: 76 GKGKAGFAHLQDRDGQIQIYVRKDQVGDEPYEGFK-HADLGDFFGVSGEIMKTDTGEVTI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VIL+K+L PLPDKYHGLT++++RYRQRY+D+IS + D F KR++I+SEIR+ +
Sbjct: 135 KAKEIVILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNKDSFDRFMKRSQIISEIRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 195 DGHGYIEVETPVLHNQAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D++ +M++TE I+ + A V I Y G E+
Sbjct: 255 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLDSAVITYDGQEV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L + R M + +K+ TG+DF KE T+ L + + + + +VG
Sbjct: 315 DLASDFARVHMVDAIKQQTGVDF---------WKEMTIEE-AHALAKEHQVEVTPTMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTFV +P+E+SPLAK + + T+RFELFI GRE ANAF+E
Sbjct: 365 HVINEFFETFVEETLQQPTFVYGHPVEVSPLAKKNPKDPRFTDRFELFIVGREFANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK-LKESDDHSYEVTLDDDFVTALEYG 543
L DP+DQR R E AQEK +E +D ++ V D+DF+ ALEYG
Sbjct: 425 LNDPIDQRQRFE-------------------AQEKERQEGNDEAHGV--DEDFLEALEYG 463
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 MPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 497
>gi|167036745|ref|YP_001664323.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115168|ref|YP_004185327.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687706|sp|B0KCE4.1|SYK_THEP3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166855579|gb|ABY93987.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928259|gb|ADV78944.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 499
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/534 (45%), Positives = 351/534 (65%), Gaps = 48/534 (8%)
Query: 50 SSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
S+ + + E LRI+ K+ LRS G+EPY +++RT+ ++ ++ Y
Sbjct: 4 SNDNIWNNTEELNELLRIRREKLNILRSMGIEPYGIDRFERTNLSSDIKNDY-------- 55
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
N E V++AGR++++R+ GK +F ++D G IQ+Y + + + ++ K+ +DIGD
Sbjct: 56 ENFEGKVVTLAGRIMSKRSHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKI-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV+G + +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV
Sbjct: 115 IIGVTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+VF KR KI+ IR+ +++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA
Sbjct: 175 KEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIAL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ +
Sbjct: 235 ELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAY 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A VNG I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK+ L
Sbjct: 295 VAQKVNGITKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDEEAIEIAKKLNLE 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+G++ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK +
Sbjct: 355 T-KEGMKK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNP 401
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T RFE FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REA 442
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 443 GDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|289579208|ref|YP_003477835.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289528921|gb|ADD03273.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 499
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/528 (44%), Positives = 348/528 (65%), Gaps = 46/528 (8%)
Query: 54 TSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSEND 112
+T + + +R +K+ L+S G+EPY K++RT+ +++++ Y N E
Sbjct: 10 NNTEELNELLQIRREKLNILKSMGIEPYGIDKYERTNVSSEIKNDY--------ENFEGK 61
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
V++AGR++++R GK +F ++D G IQ+Y + + + ++ K+ +DIGDI+GV+G
Sbjct: 62 VVTLAGRIMSKRTHGKASFADIQDREGRIQIYVKYDTVGEKNYEIFKI-LDIGDIIGVTG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
+ +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV ++F K
Sbjct: 121 EVFKSKTGEITIRVKDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEIFLK 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
R KI+ IR+ ++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR
Sbjct: 181 RTKIIKAIREFLDDRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ + A VN
Sbjct: 241 LIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVN 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGL 409
G I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK+ L +G+
Sbjct: 301 GTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDEEAIEIAKKLNLET-KEGM 359
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
+ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK + T RF
Sbjct: 360 KK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNPEFTSRF 407
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
E FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+ D
Sbjct: 408 EAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REAGDEEAH 448
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 449 M-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|402298548|ref|ZP_10818229.1| lysyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
gi|401726231|gb|EJS99472.1| lysyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
Length = 499
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/527 (45%), Positives = 348/527 (66%), Gaps = 35/527 (6%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
S +D+ VR ++++ EE +GLEP+ K++RTH+A ++ + E
Sbjct: 2 SQELELNDQLKVRREKLRQFEE---QGLEPFGGKFERTHTAVEMANQFSEKTKEELEEKS 58
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
++ V +AGRV+ +R GK F ++D +G IQ+Y K+ + +Q+ +DIGDI+G+
Sbjct: 59 HE-VILAGRVMTKRGKGKAGFAHIQDLTGQIQIYVRKDAIGEEQYAIFNT-IDIGDIVGI 116
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G +T+ GELS+ V +F +L+KSL PLPDK+HGL DV++RYRQRYVD+I P+V + F
Sbjct: 117 KGVAFKTKVGELSIKVTNFELLSKSLRPLPDKFHGLKDVEQRYRQRYVDLIVNPDVRETF 176
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+KI+ +R+ ++ LGF+EVETP + AGGA ARPF+T+HN+L LY+RIA ELHL
Sbjct: 177 ILRSKILQSMRRYLDGLGFLEVETPTMHSIAGGASARPFITHHNALDMQLYMRIAIELHL 236
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG EK+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A
Sbjct: 237 KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMRLTENVIAHIAEE 296
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G T+ Y +I L+ W+R M + VKEA+G+DF + +D + RAL
Sbjct: 297 VLGTTTVTYGEYQIDLKPEWKRVHMVDAVKEASGVDFWQEMSDEEA------RALA---- 346
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ ++ + + G+++NE FE VE L++PTF+ P+EISPLAK + T+RFE
Sbjct: 347 KEHGVHVKETMTYGHVINEFFEHFVEENLIEPTFIYGQPVEISPLAKKNPEDPRFTDRFE 406
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE ANAF+EL DP+DQR R E+Q+ + ++ DD ++
Sbjct: 407 LFIVGREHANAFTELNDPIDQRQRFEQQLVER------------------EQGDDEAH-- 446
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 447 MMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 493
>gi|138893753|ref|YP_001124206.1| lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|134265266|gb|ABO65461.1| Lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
Length = 494
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/526 (45%), Positives = 349/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +D+ VR ++KK+EEL G++P+ +++RTH A +L ++Y L+ EE +
Sbjct: 2 SHEELNDQLRVRREKLKKIEEL---GVDPFGKRFERTHKAEELFKLYGDLSK-EELEEQQ 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV
Sbjct: 58 IEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDLGDIVGVR 116
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL DV++RYRQRY+D+ P+ F
Sbjct: 117 GTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDVEQRYRQRYLDLTMNPQSKQTFI 176
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 177 TRSLIIQSMRRYLDSQGYLEVETPMMHAIAGGAAARPFITHHNALDMTLYMRIAIELHLK 236
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V
Sbjct: 237 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEV 296
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE G+DF +D +E A G+E
Sbjct: 297 LGTTKIQYGEHTVDLTPEWRRLHMVDAIKEYVGVDFWRHMDD----EEARALAKEHGVE- 351
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
I + G+++NE FE VE +L+QPTF+ +P+EISPLAK + T+RFEL
Sbjct: 352 -----IAPHMTFGHIVNEFFEQKVESQLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFEL 406
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R E Q+++ ++ +D ++E
Sbjct: 407 FIVGREHANAFTELNDPIDQRQRFEAQLKER------------------EQGNDEAHE-- 446
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 447 MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|56961899|ref|YP_173621.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
gi|81367474|sp|Q5WLU5.1|SYK_BACSK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|56908133|dbj|BAD62660.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
Length = 502
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/514 (46%), Positives = 338/514 (65%), Gaps = 32/514 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R K+ +L +G+ P+ K++RTH++N++ E + EE ++DHV +AGR++ +
Sbjct: 15 AVRRDKLNQLYDEGINPFGGKFERTHTSNEVIEQFAAFTK-EELEEKDDHVVLAGRLMTK 73
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y ++ + + + K +DIGD++GV G +T+ GE+S
Sbjct: 74 RGKGKAGFAHIQDIGGQIQIYVRQDAVGEEAYGLFKS-LDIGDMVGVGGRPFKTKVGEMS 132
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V VIL KSL PLPDKYHGL DV++RYRQRY+D+I+ PE F R+KI+ +R+
Sbjct: 133 VKVTELVILGKSLRPLPDKYHGLKDVEQRYRQRYLDLITSPESRTAFITRSKIIQVMRRY 192
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ GF+EVETP++ GGA ARPFVT+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 193 LDEKGFLEVETPMMHSIPGGASARPFVTHHNTLDMELYMRIAIELHLKRLIVGGLEKVYE 252
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE ++ H A V G T+ Y
Sbjct: 253 IGRVFRNEGISTRHNPEFTMIELYEAYADYHDIMELTEGVIAHIAKEVLGTTTVQYGEHT 312
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L W+R M + +KE TG+DF + +D + RAL + ++ + +
Sbjct: 313 VELAPSWKRVHMVDAIKEKTGVDFWQQMSDGEA------RALA----KEHGVPVKETMTF 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE +E L+QPTFV +P+ ISPLAK + T+RFELFI GRE ANAFS
Sbjct: 363 GHVVNEFFEHFIEETLIQPTFVYGHPLAISPLAKKNEEDPRFTDRFELFIVGREHANAFS 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+ + ++ DD ++ +D+DF+ ALEYG
Sbjct: 423 ELNDPIDQRKRFEAQLIER------------------EQGDDEAHR--MDEDFIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNS SIRDVI FP ++
Sbjct: 463 MPPTGGLGIGIDRLVMLLTNSPSIRDVILFPQMR 496
>gi|297545388|ref|YP_003677690.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843163|gb|ADH61679.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 499
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/534 (45%), Positives = 349/534 (65%), Gaps = 48/534 (8%)
Query: 50 SSSSTSTSDREAVRALRIK--KVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
S+ + + E LRI+ K+ L+S G+EPY K++RT+ ++ ++ Y
Sbjct: 4 SNENIWNNTEELNELLRIRREKLNILKSMGIEPYGIDKYERTNVSSDIKNDY-------- 55
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
N E V++AGR++++R GK +F ++D G IQ+Y + + + ++ K+ +DIGD
Sbjct: 56 ENFEGKVVTLAGRIMSKRTHGKASFADIQDREGRIQIYVKYDTVGEKNYEIFKI-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+G +G + +++ GE+++ V F +L+KSL LP+K+HGL D D RYRQRY D+I PEV
Sbjct: 115 IIGFTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLRYRQRYTDLIINPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+VF KR KI+ IR+ ++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA
Sbjct: 175 KEVFLKRTKIIKAIREFLDDRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIAL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG EK+YE+GR+FRNEG+ RHNPEFT +E+YEAY+DY MM +TE++ +
Sbjct: 235 ELHLKRLIVGGLEKVYEMGRVFRNEGMDVRHNPEFTLLELYEAYTDYYGMMELTEQLFAY 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A VNG I YQG EI L PW+R TM + +KE G+DFNE+ D +++AK+ L
Sbjct: 295 VAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVDFNEVKTDEEAIEIAKKLNLE 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
A +G++ G ++ VF+ +VE L+QPTFV+DYP+EISPLAK +
Sbjct: 355 A-KEGMKK------------GEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDNP 401
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
T RFE FI GRE+ANAFSEL DP+DQ+ R EQ++Q +E+
Sbjct: 402 EFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ-------------------REA 442
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ ALE GMPP G+G+G+DRLVM +T++ SIRDVI FP +K
Sbjct: 443 GDEEAHM-MDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMK 495
>gi|299144546|ref|ZP_07037625.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517634|gb|EFI41374.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 500
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 343/515 (66%), Gaps = 41/515 (7%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
LR +K+ ELR G +P+ ++D T+ + ++++ + E VS+AGR+++
Sbjct: 14 VLRREKLNELRESGKDPFKVARYDVTNYSKEIKDNFDVF--------EGKKVSIAGRIMS 65
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+AFL ++D G IQ++ K+ LL D ++ +K + D+GDI+GV G + +TE GE+
Sbjct: 66 KRRHGKIAFLDVQDKLGRIQIFARKDVLL-DNYEDIKGY-DMGDIIGVEGEVFKTEAGEI 123
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV S ++L+KSL LP+K+HGL D D RYRQRYVD+I PE+ DVF KR KI+ IR
Sbjct: 124 SVRAESTLLLSKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEIKDVFIKRTKILKSIRN 183
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++S F+EVETP+L AGGA ARPF+T+HN+L D+ +RIA EL LKR+++GG +++Y
Sbjct: 184 YLDSRDFLEVETPILATVAGGANARPFLTHHNTLDMDMQMRIANELFLKRLIVGGMDRVY 243
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
E+G++FRNEG+ TRHNPEFT IE+Y+AY+DY+ MM +TE I + A+ V G I YQG
Sbjct: 244 EMGKMFRNEGMDTRHNPEFTNIEVYQAYADYEDMMRLTEGIFENAAMEVYGTTKITYQGT 303
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI L+ PW+R TM + + EATG+DFN++ +D +E A GLE IES +
Sbjct: 304 EIDLKAPWKRITMIDAINEATGVDFNKIDSD----EEAQKIAKAKGLE------IESDWT 353
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G +++E+FE E L+QPTFVL +P+E+SPLAK LT+RFE FI E ANAF
Sbjct: 354 RGKIISEMFEEFCEASLIQPTFVLKHPVEVSPLAKRSAEDPRLTDRFEAFINTWEFANAF 413
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R EEQVR EK A DD ++ +D DFV ALE
Sbjct: 414 SELNDPIDQRERFEEQVR---EKEAG---------------DDEAH--PMDYDFVNALEV 453
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DR+VMLLT+ SIRDV+ FP +K
Sbjct: 454 GLPPTGGLGIGVDRMVMLLTDQPSIRDVVFFPTMK 488
>gi|229015479|ref|ZP_04172478.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021688|ref|ZP_04178271.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
gi|423388153|ref|ZP_17365379.1| lysyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|228739624|gb|EEL90037.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745822|gb|EEL95825.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
gi|401644343|gb|EJS62035.1| lysyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 499
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 342/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDQDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|423416529|ref|ZP_17393618.1| lysyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401110183|gb|EJQ18094.1| lysyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
Length = 499
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 341/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KTTGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDQDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|311029015|ref|ZP_07707105.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
gi|311032311|ref|ZP_07710401.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
Length = 496
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/513 (46%), Positives = 344/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+++ R KGL+P+ +++RT+ + +L Y + E+ + + V++AGR++ +R
Sbjct: 14 VRREKLQKHRDKGLDPFGARFERTNDSKELINQYGEIEK-EQLDEKEIAVTLAGRIMTKR 72
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQLY K+ + D+ ++ DIGDI+GV+G + +T+ GELS+
Sbjct: 73 GKGKAGFAHIQDLTGQIQLYIRKD-AVGDEAYEIFNSADIGDIVGVTGFVFKTKVGELSI 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLP+KYHGL DV++RYRQRY+D+I+ PE + F R+KI+ +R+ +
Sbjct: 132 KATSFELLTKALRPLPEKYHGLKDVEQRYRQRYLDLITNPESRETFIARSKIIQAMRRYL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 192 DDHGYLEVETPMMHSIAGGASARPFITHHNTLDMTLYMRIAIELHLKRLIVGGLEKVYEI 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G + Y EI
Sbjct: 252 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAKEVLGSTKVQYADSEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + VKEATG+DF + D +E A G++ I G
Sbjct: 312 DLTPEWKRLHMVDAVKEATGVDFWQQMTD----EEARALAKEHGIQ------ITEHMQFG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 362 HILNEFFEQKVEETLIQPTFIYGHPVEISPLAKKNAEDPRFTDRFELFIVGREHANAFTE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++E +D DF+ ALEYGM
Sbjct: 422 LNDPIDQKERFEAQLKEK------------------EQGNDEAHE--MDHDFIEALEYGM 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 462 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMR 494
>gi|228989284|ref|ZP_04149277.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|229003090|ref|ZP_04160942.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758173|gb|EEM07366.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228770494|gb|EEM19065.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 497
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S +L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTEELLNLYGEFSK-EELEEKGISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +Q++ D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEQYELFNT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTK+L PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKALRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKQVLGTTTIQYGEQEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF + + V + L A G+E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WSPMSVEEARAL-AKEHGVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMR 495
>gi|392959780|ref|ZP_10325259.1| Lysyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421053421|ref|ZP_15516398.1| lysyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421058052|ref|ZP_15520789.1| Lysyl-tRNA synthetase [Pelosinus fermentans B3]
gi|421064723|ref|ZP_15526569.1| Lysyl-tRNA synthetase [Pelosinus fermentans A12]
gi|421071220|ref|ZP_15532342.1| Lysyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392442022|gb|EIW19631.1| lysyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392447379|gb|EIW24626.1| Lysyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392455931|gb|EIW32698.1| Lysyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|392460497|gb|EIW36791.1| Lysyl-tRNA synthetase [Pelosinus fermentans A12]
gi|392461593|gb|EIW37770.1| Lysyl-tRNA synthetase [Pelosinus fermentans B3]
Length = 497
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 342/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ++G+EP+A K+D T AN++ LAN E+ E +AGR++A R
Sbjct: 21 VRREKMTAFEAQGIEPFARKYDVTIHANEV------LANFEQL--EGQSARIAGRIMAVR 72
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ L D SG +Q Y ++ + ++D+ K+ +DIGDI+G+ G + +T++GE+S+
Sbjct: 73 GHGKTSFVHLMDMSGKVQAYFRQDVVGEAEYDKFKL-LDIGDIIGIEGVIFKTQRGEISL 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF IL KSL PLP+K+HGL DV+ RYRQRY+D+I PEV + F R+KI+ +R +
Sbjct: 132 KATSFEILAKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNTFVTRSKIIKSLRSIL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETP++ AGGA ARPFVT+HN+L DL+LRIA EL+LKR+++GGFE++YE+
Sbjct: 192 DKRDYLEVETPMMHPIAGGAAARPFVTHHNALDMDLFLRIAPELYLKRLIVGGFERVYEV 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+S RHNPEFT +E+Y+AYSDYQ +M +TE++V+ AL V G I YQG EI
Sbjct: 252 GRVFRNEGISVRHNPEFTIVELYQAYSDYQDLMRLTEDVVSGIALEVLGTTQITYQGQEI 311
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ T +DF+ + L+ A+ + LG ENK+ +G
Sbjct: 312 DLAPPWNRLTMTEAVKKYTDVDFDTVAT-LEEARAIAAK-LGVKYENKN--------GIG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN VFE VE L+QPTF++ +P EISPLAK ++ + +T+RFE+F+ RE+AN FSE
Sbjct: 362 GILNNVFEEKVEEHLIQPTFIIGHPTEISPLAKRNKENPEITDRFEVFVFARELANGFSE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R QV Q + DD ++ +D D+V ALEYG+
Sbjct: 422 LNDPIDQEGRFASQVEQR------------------ESGDDEAH--MMDHDYVNALEYGL 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 462 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPHMR 494
>gi|110800440|ref|YP_697153.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|123344474|sp|Q0TMI7.1|SYK_CLOP1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|110675087|gb|ABG84074.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
Length = 501
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/520 (46%), Positives = 340/520 (65%), Gaps = 43/520 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ EL+ G +P+ YK +RTHS+ +++ + L E V VAGR++++
Sbjct: 21 LRRQKLAELQEAGKDPFDVYKVERTHSSADVKDNFEEL--------EGKEVKVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F L D G IQL+ + + + + + K F D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFADLADLPGKIQLFIKIDNVGEEALKEFKTF-DLGDWVAATGEVFKTKMGEVS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV D F KR++IV IR+
Sbjct: 132 VKVTSFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+YE
Sbjct: 192 LDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+S RHNPEFT IE+YEAY+DY MM I E ++ + VNG + Y+G E
Sbjct: 252 MGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESS 420
I PWRR TM + VKE GIDFNE+ +D + +AKE L L+ K
Sbjct: 312 IDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLE-FPKPLDKVTK------ 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +LN +FE E KL+QPTF++DYP+EISPL K R + TERFE F+ GRE+ N
Sbjct: 365 ---GEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCN 421
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DP+ QR R E+Q R+ + DD +Y LD++F++AL
Sbjct: 422 AYSELNDPIVQRERFEQQARER------------------EYGDDEAY--MLDEEFMSAL 461
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
E GMPP G+G+GIDR++M LT+S+SIRDVI FP +K Q+
Sbjct: 462 ETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMKPQK 501
>gi|423485329|ref|ZP_17462016.1| lysyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401135906|gb|EJQ43502.1| lysyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 499
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 342/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLIGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGEYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +K+ +G DF N + V A+E L + I+++
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEARE---------LAKEHNVEIKNTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|392391816|ref|YP_006428418.1| lysyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390522894|gb|AFL98624.1| lysyl-tRNA synthetase (class II) [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 488
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/516 (46%), Positives = 339/516 (65%), Gaps = 45/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+++LR G+EPYA ++ RTH A ++ + + L E V +AGR++++R
Sbjct: 10 VRLDKLDQLREYGVEPYADRYQRTHMAQEILDGFDTL--------EGQVVKIAGRMMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D SG IQ Y K+ + + F+ + F DIGDI+GV G+ RT +GE+SV
Sbjct: 62 DQGKVIFTHIQDFSGQIQAYIRKDDIGEEWFELISKF-DIGDIIGVKGTAFRTRRGEISV 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
IL+KS+ PLP+K+HGLT+V+ RYRQRYVD+I PEV +VF R+KI+ +R +
Sbjct: 121 HATEVQILSKSMRPLPEKFHGLTNVELRYRQRYVDLIMNPEVRNVFVMRSKIIRTMRNFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GGF+K++EI
Sbjct: 181 EGQGFLEVETPTLHTIPGGAAARPFITHHNTLDIDLYLRIALELPLKRLIVGGFDKVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++++ +M +TE +++ A V+G + YQG I
Sbjct: 241 GRNFRNEGISIKHNPEFTMMELYQAYANFEDIMELTENMISTIAKEVHGTTEVTYQGQVI 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR M + + E G+DF ++ D + AKE L+ +E
Sbjct: 301 DFKTPWRRLPMLDGILEYAGVDFGQIHTDEEAQQAAKEKGLK-------------VEPGS 347
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G ++NE FE VEP L+QPTFV+ +P+EISPLAK + H T+RFE F GRE+ NA
Sbjct: 348 SRGKIINEFFEEFVEPNLIQPTFVIGHPVEISPLAKRNAEHPEYTDRFEAFAYGRELGNA 407
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E Q VSE++ DD ++ +D+DFV ALE
Sbjct: 408 FSELNDPIDQRQRFEAQ-----------VSERAKG-------DDEAH--MMDEDFVQALE 447
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDRLVMLLT+S SIRDVI FP ++
Sbjct: 448 YGLPPTGGLGIGIDRLVMLLTDSPSIRDVILFPTMR 483
>gi|390631188|ref|ZP_10259152.1| Lysyl-tRNA synthetase [Weissella confusa LBAE C39-2]
gi|390483577|emb|CCF31500.1| Lysyl-tRNA synthetase [Weissella confusa LBAE C39-2]
Length = 494
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/515 (46%), Positives = 343/515 (66%), Gaps = 38/515 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R K+ E+R G++P+ ++++R+H+A +L E+Y + A E+ + V++AGR++ +R
Sbjct: 15 RRDKMAEMREAGMDPFGHRFERSHTAAELHELYDN-ATAEDLEEQAIEVTIAGRMMTKRR 73
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK++F ++D SG +Q++ +K + +Q++ LK D+GDILG +G++ +T GELS+
Sbjct: 74 SGKISFADIKDRSGRVQVFVQKPVVGEEQYELLKK-ADLGDILGFTGTVMKTRAGELSIN 132
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V S L+K+L PLPDKYHGLTDV+ +YRQRY+D+I+ + D F KR+KI++ IR ++
Sbjct: 133 VTSITHLSKALRPLPDKYHGLTDVETKYRQRYLDLIANDDSFDRFVKRSKIITAIRHYLD 192
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP+LQ AGGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG E++YEIG
Sbjct: 193 GEGFIEVETPMLQNEAGGASARPFITHHNALDIDLYMRIALELHLKRLIVGGMERVYEIG 252
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ +HNPEFT IE Y AY +++ +M TE I+ A AV L I YQG +I
Sbjct: 253 RVFRNEGMDPKHNPEFTVIETYAAYWNFEDVMVETENIIKAAAAAVTDDLKITYQGHDID 312
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFVIESSPS 422
L +P+ R+ M +L+KE TG+DF + TL RA+ D E K+ E
Sbjct: 313 LAKPFARKHMVDLIKEETGVDF---------WQPMTLEEARAIAD--EKGVKY--EQYWG 359
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE L+QPTFV +P+++SPLAK + T+RFELFI G E NAF
Sbjct: 360 VGHIINEFFETFVEDTLIQPTFVYGHPVDVSPLAKKNEEDDRFTDRFELFIVGAEYGNAF 419
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E Q + RAA E +D+DF+ ALEY
Sbjct: 420 TELNDPIDQRERFEAQAAE----RAAGNDEAEG----------------IDEDFIEALEY 459
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ +IRDV+ FP ++
Sbjct: 460 GMPPTGGLGIGIDRLVMLLTDTDTIRDVLLFPTMR 494
>gi|182626013|ref|ZP_02953776.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|177908720|gb|EDT71231.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
Length = 647
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/519 (47%), Positives = 339/519 (65%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ EL+ G +P+ YK +RTHS+ +++ + L E V VAGR++++
Sbjct: 21 LRRQKLAELQEAGKDPFDVYKVERTHSSADVKDNFEEL--------EGKEVKVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F L D G IQL+ + + + + + K F D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFADLADLPGKIQLFIKIDNVGEEALKEFKTF-DLGDWVAATGEVFKTKMGEVS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV D F KR++IV IR+
Sbjct: 132 VKVTSFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+YE
Sbjct: 192 LDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+S RHNPEFT IE+YEAY+DY MM I E ++ + VNG + Y+G E
Sbjct: 252 MGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESS 420
I PWRR TM + VKE GIDFNE+ +D + +AKE L L+ K
Sbjct: 312 IDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLE-FPKPLDKVTK------ 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +LN +FE E KL+QPTF++DYP+EISPL K R + TERFE F+ GRE+ N
Sbjct: 365 ---GEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCN 421
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DP+ QR R E+Q R+ + DD +Y LD++F++AL
Sbjct: 422 AYSELNDPIVQRERFEQQARER------------------EYGDDEAY--MLDEEFMSAL 461
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
E GMPP G+G+GIDR++M LT+S+SIRDVI FP +K Q
Sbjct: 462 ETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMKPQ 500
>gi|423556926|ref|ZP_17533229.1| lysyl-tRNA synthetase [Bacillus cereus MC67]
gi|401194005|gb|EJR01002.1| lysyl-tRNA synthetase [Bacillus cereus MC67]
Length = 499
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHVQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|228995467|ref|ZP_04155137.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228764328|gb|EEM13205.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
Length = 497
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S +L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTEELLNLYGEFSK-EELEEKGISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +Q++ D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEQYELFNT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTK+L PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKALRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEQEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF + + V + L A G+E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADF---WSPMSVEEARAL-AKEHGVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMR 495
>gi|406667795|ref|ZP_11075547.1| Lysine--tRNA ligase [Bacillus isronensis B3W22]
gi|405384310|gb|EKB43757.1| Lysine--tRNA ligase [Bacillus isronensis B3W22]
Length = 497
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/518 (46%), Positives = 340/518 (65%), Gaps = 42/518 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE-----NDHVSVAGR 119
+R +K+ ++R G++P+ +++RTH +N++ +A E+ N E + V +AGR
Sbjct: 13 VRRQKMTDIRENGMDPFGSRFERTHLSNEV------IAENEQFNKEQLEENSREVVIAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK F ++D +G IQ+Y K+ + + ++ D+GDI+GV G++ RT+
Sbjct: 67 IMTKRGKGKAGFAHIQDLAGQIQIYVRKDAIGEEAYELFNK-ADLGDIVGVKGNVFRTQV 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELSV F LTK+L PLPDK+HGLTDV++RYRQRYVD+++ E F +R+KI+
Sbjct: 126 GELSVKATEFTFLTKALRPLPDKFHGLTDVEQRYRQRYVDLMTNDESKTTFIQRSKIIRA 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR +++ G++EVETP+L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG E
Sbjct: 186 IRNYLDNNGYLEVETPMLHTIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLE 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE ++ H A V G ++ Y
Sbjct: 246 KVYEIGRVFRNEGISTRHNPEFTMIELYEAYADYNDIMDLTENLIAHVAQDVLGTTSVQY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
I L W+R M + VKEATG+DF +E A G+E KD
Sbjct: 306 GEDTIELGVGWKRVHMVDAVKEATGVDFWA----PMTVEEARKHAAEHGVEIKD------ 355
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ VG+++NE FE VE LVQPTFV +P+EISPLAK + T+RFELFI RE A
Sbjct: 356 AHEVGHIINEFFEQKVEETLVQPTFVTGHPVEISPLAKKNPEDPRFTDRFELFIVRREHA 415
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAF+EL DP+DQR R E Q ++EK + ++ E +D+DF+ A
Sbjct: 416 NAFTELNDPIDQRERFEAQ-----------MAEKEAGNDEAHE---------MDNDFIEA 455
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 456 LEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMR 493
>gi|379726867|ref|YP_005319052.1| lysyl-tRNA synthetase [Melissococcus plutonius DAT561]
gi|376317770|dbj|BAL61557.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius DAT561]
Length = 498
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 342/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ L KG++P+ ++DRTH++ +L +++ EE N N SVAGR++ +R
Sbjct: 18 VRREKMDTLYKKGIDPFGKRFDRTHNSAELHKLFDDRTK-EELNEMNLTASVAGRMITKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + + +D K D+GD GV+G + +T+ GE+++
Sbjct: 77 GKGKVGFANLQDRDGQIQLYVRKDEVGEEPYDLFK-HADLGDFFGVTGQIMKTDTGEVTI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAKKITLLSKALRPLPDKYHGLTNIEQRYRQRYLDLISNKESFDRFIKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DSNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E+Y AY+DY+ +M++TE I+ + A V GK I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMMEVYTAYTDYRDVMDLTEGIIRNVAEKVLGKTDITYGGQPV 315
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L + ++R M + +KE GIDF L +AKE K I +
Sbjct: 316 DLGKAFKRVHMVDAIKEQVGIDFWPKMTLDEARTLAKEY-------------KVEITDNM 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE VE L PTFV +P+E+SPLAK + + T+RFELFI G+E ANA
Sbjct: 363 MVGHIINEFFETFVEDTLQDPTFVYGHPVEVSPLAKKNEQDPRFTDRFELFIVGKEFANA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR+R EEQ ++ ++ +D ++ V D+DF+ ALE
Sbjct: 423 FTELNDPIDQRSRFEEQEKER------------------EQGNDEAHGV--DEDFLEALE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+G+DRLVMLLT++ SIRDV+ FP L+
Sbjct: 463 YGMPPTGGLGIGMDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|423410206|ref|ZP_17387353.1| lysyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
gi|401649015|gb|EJS66605.1| lysyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
Length = 499
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPAWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HVINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|423364640|ref|ZP_17342109.1| lysyl-tRNA synthetase [Bacillus cereus VD022]
gi|401072752|gb|EJP81214.1| lysyl-tRNA synthetase [Bacillus cereus VD022]
Length = 499
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ EK + + + +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKE---------REKGNDEAHM-----------MDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|89100492|ref|ZP_01173353.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89084758|gb|EAR63898.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 496
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 343/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR KG++P+ +++R+H + L + Y E +N V++AGR++ +R
Sbjct: 14 VRREKMNSLREKGMDPFGKRFERSHQSQDLIDEYGE-QEKEAIEEQNISVTLAGRIMTKR 72
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y ++ + + ++ D+GD++GV+G++ +T+ GELS+
Sbjct: 73 GKGKAGFAHIQDLKGQIQIYVRQDAIGEESYEIFNS-ADLGDLVGVTGTLFKTKVGELSI 131
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +F +LTKSL PLP+K+HGL DV++RYRQRY+D+I E F R++I+ +R+ +
Sbjct: 132 KVEAFELLTKSLRPLPEKFHGLKDVEQRYRQRYLDLIMSQESKKTFITRSRIIQSMRRYL 191
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 192 DSHGYLEVETPMMHSIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 251
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G T+ Y E+
Sbjct: 252 GRVFRNEGVSTRHNPEFTMIELYEAYADYRDIMSLTENLVAHIAEEVLGTTTVQYGDYEV 311
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W R M + +KE TG+DF + +++KE L + I+ + G
Sbjct: 312 NLKPEWTRLHMVDAIKEHTGVDFWK-----QMSKEE-----AQALAKEHNVEIKETMEYG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 362 HIVNEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFIVAREHANAFTE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +DDDF+ ALEYGM
Sbjct: 422 LNDPIDQRERFEAQLKER------------------EQGNDEAH--MMDDDFIEALEYGM 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 462 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 494
>gi|423399514|ref|ZP_17376710.1| lysyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|401643570|gb|EJS61266.1| lysyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
Length = 499
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPAWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|345856158|ref|ZP_08808655.1| lysyl-tRNA synthetase [Desulfosporosinus sp. OT]
gi|344330726|gb|EGW42007.1| lysyl-tRNA synthetase [Desulfosporosinus sp. OT]
Length = 496
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 342/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K+E LR +EPYA ++ RTH A + E + L E+ VSVAGR++++R
Sbjct: 10 IRLEKLELLRQADVEPYADRYVRTHKALDILEHFEEL--------EDQEVSVAGRIMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F+ ++D SG IQ+Y K+ L FD + F D+GDI+G G + RT++GE+S+
Sbjct: 62 DQGKVIFVHVQDLSGRIQIYIRKDELGETLFDLITKF-DVGDIVGAEGKVFRTKRGEISI 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
++ +L+K++ PLP+K+HGLT+V+ RYR+RY+D+I P+V VF R+KI+ +R+ +
Sbjct: 121 HAHNVKLLSKAMRPLPEKFHGLTNVETRYRRRYLDLIMNPDVRQVFVTRSKIIRFMREFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E F+EVETP L GGA ARPF T+HN+L DLYLRIA EL LKR+++GGFEK++EI
Sbjct: 181 EERDFLEVETPTLHTIPGGAAARPFSTHHNALDIDLYLRIALELPLKRLIVGGFEKVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++++ +M +TEE++ H V+G L I YQG +
Sbjct: 241 GRTFRNEGISIKHNPEFTMMELYQAYANFEDIMELTEEMIAHIVKKVHGTLEITYQGQSL 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PWRR M + + E +G+DF + D + A+E A GL +E+ S G
Sbjct: 301 YFKTPWRRLPMLDGILEYSGVDFRSIKTD-EQAREA---AQNKGLH------VEADASRG 350
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++NE FE VEP L QPTF+ +P+EISPLAK + T+RFE FI GRE+ANAFSE
Sbjct: 351 KIINEFFEEFVEPNLTQPTFITGHPVEISPLAKRNSDQPEYTDRFEAFIFGRELANAFSE 410
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q A E++K DD ++ LD+DFV ALEYG+
Sbjct: 411 LNDPIDQRQRFEAQ-----------------AAERIK-GDDEAH--ILDEDFVQALEYGL 450
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVM LT+SASIRDVI FP ++
Sbjct: 451 PPTGGLGIGIDRLVMFLTDSASIRDVILFPTMR 483
>gi|392988412|ref|YP_006487005.1| lysyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
gi|392335832|gb|AFM70114.1| lysyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
Length = 498
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/514 (47%), Positives = 338/514 (65%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLRENGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMITRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + +D K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYDVFK-HADLGDFFGVTGEIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGL ++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLINIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+Q +MN+TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFQDVMNLTEGIIRNAAQKVLGTAEITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE ++R M + +KE TG+DF KE TL E V E+ VG
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WKEMTLEEALALAEEHHVEVTEAM-GVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 366 HVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQR R E AQEK +E +D ++ V D+DF+ ALEYG
Sbjct: 426 LNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEYG 464
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 465 MPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|218895213|ref|YP_002443624.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
gi|228898830|ref|ZP_04063113.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|228963177|ref|ZP_04124347.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229074138|ref|ZP_04207185.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|229113753|ref|ZP_04243189.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|402562831|ref|YP_006605555.1| lysyl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|423376648|ref|ZP_17353932.1| lysyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423450097|ref|ZP_17426976.1| lysyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423462814|ref|ZP_17439582.1| lysyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423532170|ref|ZP_17508588.1| lysyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423542559|ref|ZP_17518949.1| lysyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423548790|ref|ZP_17525148.1| lysyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|423565565|ref|ZP_17541840.1| lysyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|423618740|ref|ZP_17594573.1| lysyl-tRNA synthetase [Bacillus cereus VD115]
gi|434378720|ref|YP_006613364.1| lysyl-tRNA ligase [Bacillus thuringiensis HD-789]
gi|226737090|sp|B7ISY7.1|SYK_BACC2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|218541672|gb|ACK94066.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
gi|228669750|gb|EEL25156.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228709032|gb|EEL61158.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228796562|gb|EEM44000.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228860855|gb|EEN05232.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|401127104|gb|EJQ34834.1| lysyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401168355|gb|EJQ75620.1| lysyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401174321|gb|EJQ81532.1| lysyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401193642|gb|EJR00646.1| lysyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401252582|gb|EJR58838.1| lysyl-tRNA synthetase [Bacillus cereus VD115]
gi|401641287|gb|EJS59007.1| lysyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|401791483|gb|AFQ17522.1| lysyl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|401877277|gb|AFQ29444.1| lysyl-tRNA ligase [Bacillus thuringiensis HD-789]
gi|402422942|gb|EJV55163.1| lysyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402465248|gb|EJV96930.1| lysyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 499
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|239825660|ref|YP_002948284.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
gi|239805953|gb|ACS23018.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
Length = 494
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 347/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ +LR G++P+ +++RTH A +L ++Y L+ EE + V+VAGR++ +R
Sbjct: 12 VRREKLNKLREMGIDPFGKRFERTHKAKELFDLYGDLSK-EELEEKQIKVAVAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y ++ + +Q++ K D+GDI+GV G++ +T+ GELS+
Sbjct: 71 GKGKAGFAHIQDVTGQIQIYVREDTVGEEQYELFKT-SDLGDIIGVYGTVFKTKVGELSI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE + F R++I+ +R+ +
Sbjct: 130 KVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKNTFITRSRIIQAMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DSHGYLEVETPMMHSIAGGAAARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V G I Y +
Sbjct: 250 GRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIAQEVLGTTKIQYGEHTV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + +KE G+DF + +D +E A G+E I + G
Sbjct: 310 DLTPEWKRLHMVDAIKEYVGVDFWKQMSD----EEARELAKEHGVE------IAPHMTFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 360 HIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 420 LNDPIDQRERFEAQLKER------------------EQGNDEAHE--MDEDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|229094798|ref|ZP_04225804.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|228688666|gb|EEL42538.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
Length = 499
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSIESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|407708026|ref|YP_006831611.1| CopG family transcriptional regulator [Bacillus thuringiensis MC28]
gi|407385711|gb|AFU16212.1| lysyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 496
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 341/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 12 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 71 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 130 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 250 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD + VG
Sbjct: 310 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 360 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 420 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 460 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 495
>gi|168187058|ref|ZP_02621693.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169295090|gb|EDS77223.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 510
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/516 (47%), Positives = 340/516 (65%), Gaps = 43/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R++K++ L+ +G +P+ YK +RTH++ Q+++ Y L E +V VAGR++++R
Sbjct: 31 RMQKLQNLQEQGKDPFDVYKVERTHTSEQIKDNYDEL--------EGKNVIVAGRLMSKR 82
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F +RD G IQLY + + + ++ + K F DIGD + ++G++ +T+ GE+++
Sbjct: 83 VHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTF-DIGDFVSITGTVFKTKTGEITL 141
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +LTKSL PLP+K+HGL D D RYRQRYVD+I EV + F KR I+ IR+ +
Sbjct: 142 HIVDFQLLTKSLKPLPEKFHGLKDPDLRYRQRYVDLIMNEEVKETFMKRTAIIKAIREFL 201
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ F+EVETP+L AGGA ARPFVT+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 202 DNRDFLEVETPILSPIAGGAAARPFVTHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 261
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + VNG + Y+G EI
Sbjct: 262 GKNFRNEGIDVRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEI 321
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR TM + VKE G+DFNE+ D +VAKE GLE K +
Sbjct: 322 DFKPPWRRVTMVDAVKEYAGVDFNEVKTDEEAREVAKEK-------GLELKKEL---KDC 371
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP E SPL K R + LTERFE F+ GRE+ NA
Sbjct: 372 TKGDILVALFEEFGEEKLMQPTFICDYPKENSPLTKKKRGNDELTERFEGFVYGREICNA 431
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP+ Q+ R +Q+++ + DD +Y +DDDF+ ALE
Sbjct: 432 YSELNDPIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFINALE 471
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL+M LT+S+SIRDVI FP +K
Sbjct: 472 IGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFPTMK 507
>gi|168215147|ref|ZP_02640772.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|170713448|gb|EDT25630.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
Length = 501
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/520 (46%), Positives = 339/520 (65%), Gaps = 43/520 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ EL+ G +P+ YK +RTHS+ ++ + L E V VAGR++++
Sbjct: 21 LRRQKLAELQEAGKDPFDVYKVERTHSSADAKDNFEEL--------EGKEVKVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F L D G IQL+ + + + + + K F D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFADLADLPGKIQLFIKIDNVGEEALKEFKTF-DLGDWVAATGEVFKTKMGEVS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV D F KR++IV IR+
Sbjct: 132 VKVTSFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+YE
Sbjct: 192 LDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+S RHNPEFT IE+YEAY+DY MM I E ++ + VNG + Y+G E
Sbjct: 252 MGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESS 420
I PWRR TM + VKE GIDFNE+ +D + +AKE L L+ K
Sbjct: 312 IDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLE-FPKPLDKVTK------ 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +LN +FE E KL+QPTF++DYP+EISPL K R + TERFE F+ GRE+ N
Sbjct: 365 ---GEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCN 421
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DP+ QR R E+Q R+ + DD +Y LD++F++AL
Sbjct: 422 AYSELNDPIVQRERFEQQARER------------------EYGDDEAY--MLDEEFMSAL 461
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
E GMPP G+G+GIDR++M LT+S+SIRDVI FP +K Q+
Sbjct: 462 ETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMKPQK 501
>gi|18311447|ref|NP_563381.1| lysyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168218225|ref|ZP_02643850.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|169343177|ref|ZP_02864198.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|422347530|ref|ZP_16428441.1| lysyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|422875410|ref|ZP_16921895.1| lysyl-tRNA synthetase [Clostridium perfringens F262]
gi|39932227|sp|Q8XHL8.1|SYK_CLOPE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|18146131|dbj|BAB82171.1| lysine-tRNA ligase [Clostridium perfringens str. 13]
gi|169298729|gb|EDS80805.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|182379764|gb|EDT77243.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|373223800|gb|EHP46144.1| lysyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|380303621|gb|EIA15921.1| lysyl-tRNA synthetase [Clostridium perfringens F262]
Length = 501
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/520 (46%), Positives = 340/520 (65%), Gaps = 43/520 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ EL+ G +P+ YK +RTHS+ +++ + L E V VAGR++++
Sbjct: 21 LRRQKLVELQEAGKDPFDVYKVERTHSSADVKDNFEEL--------EGKEVKVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F L D G IQL+ + + + + + K F D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFADLADLPGKIQLFIKIDNVGEEALKEFKTF-DLGDWVAATGEVFKTKMGEVS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV D F KR++IV IR+
Sbjct: 132 VKVTSFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+YE
Sbjct: 192 LDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+S RHNPEFT IE+YEAY+DY MM I E ++ + VNG + Y+G E
Sbjct: 252 MGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESS 420
I PWRR TM + VKE GIDFNE+ +D + +AKE L L+ K
Sbjct: 312 IDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLE-FPKPLDKVTK------ 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +LN +FE E KL+QPTF++DYP+EISPL K R + TERFE F+ GRE+ N
Sbjct: 365 ---GEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCN 421
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DP+ QR R E+Q R+ + DD +Y LD++F++AL
Sbjct: 422 AYSELNDPIVQRERFEQQARER------------------EYGDDEAY--MLDEEFMSAL 461
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
E GMPP G+G+GIDR++M LT+S+SIRDVI FP +K Q+
Sbjct: 462 ETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMKPQK 501
>gi|168206860|ref|ZP_02632865.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|168211213|ref|ZP_02636838.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
gi|170661760|gb|EDT14443.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170710776|gb|EDT22958.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
Length = 647
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/519 (47%), Positives = 339/519 (65%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ EL+ G +P+ YK +RTHS+ +++ + L E V VAGR++++
Sbjct: 21 LRRQKLVELQEAGKDPFDVYKVERTHSSADVKDNFEEL--------EGKEVKVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F L D G IQL+ + + + + + K F D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFADLADLPGKIQLFIKIDNVGEEALKEFKTF-DLGDWVAATGEVFKTKMGEVS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V SF ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV D F KR++IV IR+
Sbjct: 132 VKVTSFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+YE
Sbjct: 192 LDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+S RHNPEFT IE+YEAY+DY MM I E ++ + VNG + Y+G E
Sbjct: 252 MGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESS 420
I PWRR TM + VKE GIDFNE+ +D + +AKE L L+ K
Sbjct: 312 IDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLE-FPKPLDKVTK------ 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +LN +FE E KL+QPTF++DYP+EISPL K R + TERFE F+ GRE+ N
Sbjct: 365 ---GEVLNMLFEEYGEDKLIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCN 421
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DP+ QR R E+Q R+ + DD +Y LD++F++AL
Sbjct: 422 AYSELNDPIVQRERFEQQARER------------------EYGDDEAY--MLDEEFMSAL 461
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
E GMPP G+G+GIDR++M LT+S+SIRDVI FP +K Q
Sbjct: 462 ETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMKPQ 500
>gi|423520618|ref|ZP_17497091.1| lysyl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|401180514|gb|EJQ87672.1| lysyl-tRNA synthetase [Bacillus cereus HuA4-10]
Length = 499
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 342/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF + + ++ A+E L + I+ + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYSGADFWKTMS-VEEARE---------LAKEHSVEIKDTMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|228905873|ref|ZP_04069771.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853813|gb|EEM98572.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 499
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 341/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + V++AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVAIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDQDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|410453291|ref|ZP_11307249.1| lysyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
gi|409933414|gb|EKN70342.1| lysyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
Length = 494
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 346/517 (66%), Gaps = 40/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV--AGRVVA 122
+R +K+ +R GL+P+ ++DR+H+ N E+ E+ E HVSV AGR++
Sbjct: 12 VRREKMNSMRENGLDPFGKRFDRSHNTN---ELIEEYGELEKEEIEAKHVSVSLAGRIMT 68
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKG 180
+R GK F ++D +G IQ+Y ++ + +Q+ KVF D+GDI+GV+G++ +T+ G
Sbjct: 69 KRGKGKAGFAHIQDLTGQIQVYVRQDAIGEEQY---KVFDSADLGDIIGVNGTLFKTKVG 125
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
ELSV V F LTK+L PLPDK+HGL DV++RYRQRY+D+I E + F R++I+ +
Sbjct: 126 ELSVKVEHFTFLTKALRPLPDKFHGLKDVEQRYRQRYLDLIMSQESKETFISRSRIIQSM 185
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R+ +++ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK
Sbjct: 186 RRYLDNHGYLEVETPMMHSIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEK 245
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE ++ H A V G TI Y
Sbjct: 246 VYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYRDIMSLTENLIAHIAQEVLGTTTIQYG 305
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
E+ L+ W+R M + +KE TG DF + ++ V KE A G+E I
Sbjct: 306 DYEVDLKPEWKRLHMVDAIKEYTGADFWQ---EMSV-KEARELAKEHGVE------ITEH 355
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE AN
Sbjct: 356 MLYGHIVNEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHAN 415
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E Q+++ ++ +D ++ +D+DFV AL
Sbjct: 416 AFTELNDPIDQRERFEAQLKER------------------EQGNDEAH--MMDEDFVEAL 455
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 456 EYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 492
>gi|332685807|ref|YP_004455581.1| lysyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
gi|332369816|dbj|BAK20772.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
35311]
Length = 498
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 342/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ L KG++P+ ++DRTH++ +L +++ EE N N SVAGR++ +R
Sbjct: 18 VRREKMDTLYKKGIDPFGKRFDRTHNSAELHKLFDDRTK-EELNEMNLTASVAGRMITKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + + +D K D+GD GV+G + +T+ GE+++
Sbjct: 77 GKGKVGFANLQDRDGQIQLYVRKDEVGEEPYDLFK-HADLGDFFGVTGQIMKTDTGEVTI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAKKITLLSKALRPLPDKYHGLTNIEQRYRQRYLDLISNKESFDRFIKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DSNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E+Y AY+DY+ +M++TE I+ + A V GK I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMMEVYTAYTDYRDVMDLTEGIIRNVAEKVLGKTDITYGGQPV 315
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L + ++R M + +KE GIDF L +AKE K I +
Sbjct: 316 DLGKAFKRVHMVDAIKEQVGIDFWPKMTLDEARTLAKEY-------------KVEITDNM 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE VE L PTFV +P+E+SPLAK + + T+RFELFI G+E ANA
Sbjct: 363 MVGHIINEFFETFVEDTLQDPTFVYGHPVEVSPLAKKNEQDPRFTDRFELFIVGKEFANA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR+R EEQ ++ ++ +D ++ V D+DF+ +LE
Sbjct: 423 FTELNDPIDQRSRFEEQEKER------------------EQGNDEAHGV--DEDFLESLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+G+DRLVMLLT++ SIRDV+ FP L+
Sbjct: 463 YGMPPTGGLGIGMDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|312109229|ref|YP_003987545.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|336233622|ref|YP_004586238.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|423718345|ref|ZP_17692527.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidans TNO-09.020]
gi|311214330|gb|ADP72934.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|335360477|gb|AEH46157.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|383365281|gb|EID42580.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidans TNO-09.020]
Length = 494
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 348/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ +LR G++P+ +++RTH A +L ++Y L+ EE + V+VAGR++ +R
Sbjct: 12 VRREKLHKLREMGIDPFGKRFERTHKAQELFDLYGDLSK-EELEEKQIKVAVAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ+Y ++ + +Q++ K D+GDI+GV G++ +T+ GELS+
Sbjct: 71 GKGKAGFAHIQDVTGQIQIYVREDAVGPEQYELFKT-SDLGDIIGVCGTVFKTKVGELSI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I P+ + F R++I+ +R+ +
Sbjct: 130 KVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPDSKNTFITRSRIIQSMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DSHGYLEVETPMMHNIAGGAAARPFITHHNALDMPLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V G I Y ++
Sbjct: 250 GRVFRNEGVSTRHNPEFTMLELYEAYADFRDIMTLTENLIAHIAQEVLGTTKIQYGEHKV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + +KE G+DF + +D +E A G+E I + G
Sbjct: 310 DLTPEWKRLHMVDAIKEYVGVDFWKQMSD----EEARELAKEHGVE------IAPHMTFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 360 HIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++E +D+DF+ ALEYGM
Sbjct: 420 LNDPIDQRERFEAQLKER------------------EQGNDEAHE--MDEDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>gi|110803200|ref|YP_699721.1| lysyl-tRNA synthetase [Clostridium perfringens SM101]
gi|123047148|sp|Q0SQ86.1|SYK_CLOPS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|110683701|gb|ABG87071.1| lysine--tRNA ligase [Clostridium perfringens SM101]
Length = 501
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/520 (46%), Positives = 340/520 (65%), Gaps = 43/520 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ EL+ G +P+ YK +RTHS+ +++ + L E V VAGR++++
Sbjct: 21 LRRQKLVELQEAGKDPFDVYKVERTHSSADVKDNFEEL--------EGKEVKVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F L D G IQL+ + + + + + K F D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFADLADLPGKIQLFIKIDNVGEEALKEFKTF-DLGDWVAATGEVFKTKMGEVS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V SF ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV D F KR++IV IR+
Sbjct: 132 IKVTSFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GFEK+YE
Sbjct: 192 LDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+S RHNPEFT IE+YEAY+DY MM I E ++ + VNG + Y+G E
Sbjct: 252 MGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESS 420
I PWRR TM + VKE GIDFNE+ +D + +AKE L L+ K
Sbjct: 312 IDFTPPWRRITMVDAVKEFAGIDFNEIKSDEEAQAIAKEKNLE-FPKPLDKVTK------ 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +LN +FE E KL+QPTF++DYP+EISPL K R + TERFE F+ GRE+ N
Sbjct: 365 ---GEVLNMLFEEYGEDKLIQPTFLVDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCN 421
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DP+ QR R E+Q R+ + DD +Y LD++F++AL
Sbjct: 422 AYSELNDPIVQRERFEQQARER------------------EYGDDEAY--MLDEEFMSAL 461
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
E GMPP G+G+GIDR++M LT+S+SIRDVI FP +K Q+
Sbjct: 462 ETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMKPQK 501
>gi|163938085|ref|YP_001642969.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|229009586|ref|ZP_04166813.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053923|ref|ZP_04195358.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
gi|229165065|ref|ZP_04292861.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
gi|423370734|ref|ZP_17348138.1| lysyl-tRNA synthetase [Bacillus cereus VD142]
gi|423490692|ref|ZP_17467374.1| lysyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423496432|ref|ZP_17473076.1| lysyl-tRNA synthetase [Bacillus cereus CER057]
gi|423496774|ref|ZP_17473391.1| lysyl-tRNA synthetase [Bacillus cereus CER074]
gi|423512989|ref|ZP_17489519.1| lysyl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|423520217|ref|ZP_17496698.1| lysyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|423595280|ref|ZP_17571310.1| lysyl-tRNA synthetase [Bacillus cereus VD048]
gi|423597199|ref|ZP_17573199.1| lysyl-tRNA synthetase [Bacillus cereus VD078]
gi|423659604|ref|ZP_17634773.1| lysyl-tRNA synthetase [Bacillus cereus VDM022]
gi|423671108|ref|ZP_17646137.1| lysyl-tRNA synthetase [Bacillus cereus VDM034]
gi|423672669|ref|ZP_17647608.1| lysyl-tRNA synthetase [Bacillus cereus VDM062]
gi|226710882|sp|A9VN90.1|SYK_BACWK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|163860282|gb|ABY41341.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|228618450|gb|EEK75479.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
gi|228721464|gb|EEL72984.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
gi|228751730|gb|EEM01529.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|401073321|gb|EJP81746.1| lysyl-tRNA synthetase [Bacillus cereus VD142]
gi|401149162|gb|EJQ56641.1| lysyl-tRNA synthetase [Bacillus cereus CER057]
gi|401155482|gb|EJQ62892.1| lysyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401163955|gb|EJQ71295.1| lysyl-tRNA synthetase [Bacillus cereus CER074]
gi|401222206|gb|EJR28803.1| lysyl-tRNA synthetase [Bacillus cereus VD048]
gi|401239540|gb|EJR45965.1| lysyl-tRNA synthetase [Bacillus cereus VD078]
gi|401293939|gb|EJR99572.1| lysyl-tRNA synthetase [Bacillus cereus VDM034]
gi|401304623|gb|EJS10173.1| lysyl-tRNA synthetase [Bacillus cereus VDM022]
gi|401311401|gb|EJS16702.1| lysyl-tRNA synthetase [Bacillus cereus VDM062]
gi|402429037|gb|EJV61128.1| lysyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|402446337|gb|EJV78197.1| lysyl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 499
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 342/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLQGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KAIGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +K+ +G DF N + V A+E L + I+++
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEARE---------LAKEHNVEIKNTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|373859344|ref|ZP_09602074.1| lysyl-tRNA synthetase [Bacillus sp. 1NLA3E]
gi|372451013|gb|EHP24494.1| lysyl-tRNA synthetase [Bacillus sp. 1NLA3E]
Length = 494
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 345/516 (66%), Gaps = 36/516 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K+ +R GL+P+ +++RTH +L E Y N EE + N V++AGR++ +
Sbjct: 11 VVRREKMNTMRENGLDPFGKRFERTHFTKELIEQYGEAEN-EELETNNISVTLAGRIMTK 69
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFV--DIGDILGVSGSMKRTEKGE 181
R GK F ++D +G IQ+Y ++ + +Q+ KVF D+GDI+GV G++ RT+ GE
Sbjct: 70 RGKGKAGFAHIQDLTGQIQVYVRQDAVGEEQY---KVFTSADLGDIVGVVGTVFRTKMGE 126
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
SV V +FV LTK+L PLPDK+HGL D+++RYRQRY+D+I E F R++I+ +R
Sbjct: 127 FSVKVTNFVFLTKALRPLPDKFHGLKDIEQRYRQRYLDLIMSQESKSTFITRSRIIQSMR 186
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ G++EVETP++ AGGA ARPF+T+HN+L L++RIA ELHLKR+++GG EK+
Sbjct: 187 RYLDDHGYLEVETPMMHAIAGGASARPFITHHNALDMPLFMRIAIELHLKRLIVGGLEKV 246
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE ++ H A V G T+ Y
Sbjct: 247 YEIGRVFRNEGVSTRHNPEFTMIELYEAYADYRDIMSLTENLIAHIAQEVLGTTTVQYGE 306
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
E+ L+ W+R M + +KE TG DF ++ V + L A G+E I ++
Sbjct: 307 YEVDLKPEWKRLHMVDAIKEFTGADF---WQEMSVEEAREL-AKEHGVE------INNNM 356
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
G+++NE FE +E KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 357 LYGHIVNEFFEQKIEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANA 416
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E Q+++ ++ +D ++ +D+DFV ALE
Sbjct: 417 FTELNDPIDQRERFEAQLKER------------------EQGNDEAH--LMDEDFVEALE 456
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDR+VMLLTNS SIRDV+ FP+++
Sbjct: 457 YGMPPTGGLGIGIDRVVMLLTNSPSIRDVLLFPLMR 492
>gi|451817016|ref|YP_007453217.1| lysine--tRNA ligase LysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451782995|gb|AGF53963.1| lysine--tRNA ligase LysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 501
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/521 (47%), Positives = 341/521 (65%), Gaps = 43/521 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
LR K+ EL++ G +P+ YK +RTH++ +++ Y L E V+VAGR+++
Sbjct: 20 GLRRTKLAELQNAGKDPFDVYKVNRTHTSEEVKANYDEL--------EGKEVTVAGRLMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + +++ + Q K F D+GD + +G + T+ GE+
Sbjct: 72 KRGQGKVVFSDIHDKDGKIQLFLKIDKVGEENLKQYKAF-DLGDWVAATGEVFTTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV VN+F + KSL PLP+K+HGL D D RYRQR VD+I+ EV + F KR+KI+S +R+
Sbjct: 131 SVNVNTFELTCKSLKPLPEKWHGLKDPDLRYRQREVDIITNAEVKETFIKRSKIISAMRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GFVEVETP+L AGGA ARPFVT+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDNKGFVEVETPILGAIAGGAAARPFVTHHNTLDIDMYLRIATELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V H VNG ++YQG
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAHICEKVNGTTKVNYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIES 419
EI + PWRR TM + VKE G+DFN++ +D + +AKE L L+ K
Sbjct: 311 EIDFKPPWRRITMVDAVKEYAGVDFNQIKSDEEAQAIAKEKHLE-FAKPLDTVTK----- 364
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
G +LN ++E E ++QPTF+ DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 365 ----GEVLNMLYEEFGEANMIQPTFITDYPVEISPLTKKKRGNPEFTERFEGFVFGREIC 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NA+SEL DP+ QR R E+Q ++ + DD +Y LD+ F++A
Sbjct: 421 NAYSELNDPIVQRQRFEQQAKER------------------ELGDDEAY--MLDEQFMSA 460
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LE GMPP GMG+GIDRLVM LT+SASIRDVI FP ++ Q+
Sbjct: 461 LETGMPPTGGMGMGIDRLVMFLTDSASIRDVILFPTMRPQK 501
>gi|393198728|ref|YP_006460570.1| lysyl-tRNA synthetase [Solibacillus silvestris StLB046]
gi|327438059|dbj|BAK14424.1| lysyl-tRNA synthetase [Solibacillus silvestris StLB046]
Length = 497
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/518 (46%), Positives = 341/518 (65%), Gaps = 42/518 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN-----DHVSVAGR 119
+R +K+ ++R G++P+ +++RTH +N++ +A E+ N E V +AGR
Sbjct: 13 VRRQKMTDIRENGMDPFGSRFERTHLSNEV------IAENEQFNKEQLEENPREVVIAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK F ++D +G IQ+Y K+ + + ++ D+GDI+GV G++ RT+
Sbjct: 67 IMTKRGKGKAGFAHIQDLAGQIQIYVRKDAIGEEAYELFNK-ADLGDIVGVKGNVFRTQV 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELSV F LTK+L PLPDK+HGLTDV++RYRQRYVD+++ E F +R+KI+
Sbjct: 126 GELSVKATEFTFLTKALRPLPDKFHGLTDVEQRYRQRYVDLMTNDESKTTFIQRSKIIRA 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR +++ G++EVETP+L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG E
Sbjct: 186 IRNYLDNNGYLEVETPMLHTIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLE 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE ++ H A V G ++ Y
Sbjct: 246 KVYEIGRVFRNEGISTRHNPEFTMIELYEAYADYNDIMDLTENLIAHVAQDVLGTTSVQY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
I L W+R M + VKEATG+DF + V + L A G+E KD
Sbjct: 306 GEDTIELGVGWKRVHMVDAVKEATGVDF---WAPMTVEEARKL-AAEHGVEIKD------ 355
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ VG+++NE FE VE LVQPTFV +P+EISPLAK + T+RFELFI RE A
Sbjct: 356 AHEVGHIINEFFEQKVEETLVQPTFVTGHPVEISPLAKKNPEDPRFTDRFELFIVRREHA 415
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAF+EL DP+DQR R E Q ++EK + ++ E +D+DF+ A
Sbjct: 416 NAFTELNDPIDQRERFEAQ-----------MAEKEAGNDEAHE---------MDNDFIEA 455
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 456 LEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMR 493
>gi|229131084|ref|ZP_04259997.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228652421|gb|EEL08345.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
Length = 499
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 342/518 (66%), Gaps = 36/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KAIGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKV--AKETTLRALGDGLENKDKFVIESSPS 422
LE W R M + +K+ +G DF N + V A+E L + I+++
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEARE---------LAKEHNVEIKNTME 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF
Sbjct: 361 VGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEY
Sbjct: 421 TELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|187935723|ref|YP_001884425.1| lysyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|187723876|gb|ACD25097.1| lysine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 501
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/521 (46%), Positives = 339/521 (65%), Gaps = 43/521 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
ALR K+ +L+ G +P+ YK +RTH++ +++ Y L E +V+VAGR+++
Sbjct: 20 ALRRTKLADLQEAGKDPFDVYKVERTHTSEEVKSNYEEL--------EGKNVTVAGRIMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + + + + K + D+GD + +G + T+ GE+
Sbjct: 72 KRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTY-DLGDWVVATGEVFTTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV V++F ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV + F KR+KI+S IR+
Sbjct: 131 SVKVSNFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA A+PFVT+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDTKGFLEVETPILAPIAGGAAAKPFVTHHNTLDIDMYLRIATELYLKRLVVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V + VNG + YQG
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYVCEKVNGTTKVTYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIES 419
EI PWRR TM ++VKE G+DF + +D + +AKE L L K
Sbjct: 311 EIDFMPPWRRVTMVDVVKEHAGVDFTTIKSDEEAQAIAKEKHLE-FAKPLNTVTK----- 364
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
G +LN ++E E ++QPTFV+DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 365 ----GEVLNALYEEFGEANMIQPTFVMDYPVEISPLTKKKRGNEEFTERFEGFVFGRELC 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NA+SEL DP+ QR R E+Q ++ + DD +Y LD+ F++A
Sbjct: 421 NAYSELNDPVVQRQRFEQQAKER------------------ELGDDEAY--MLDEQFMSA 460
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LE GMPP GMG+GIDRL+M LT+++SIRDVI FP +K Q+
Sbjct: 461 LETGMPPTGGMGMGIDRLIMFLTDASSIRDVILFPTMKPQK 501
>gi|430856256|ref|ZP_19473955.1| lysyl-tRNA synthetase [Enterococcus faecium E1392]
gi|430545089|gb|ELA85083.1| lysyl-tRNA synthetase [Enterococcus faecium E1392]
Length = 498
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 339/515 (65%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR G++P+ +++RTH++ +L E++ EE SVAGR++ RR
Sbjct: 18 VRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTK-EELAEMGLTASVAGRMMTRR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T+ GE+S+
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFK-HADLGDFFGVTGQIMKTDTGEVSI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ IL+K+L PLPDKYHGLT++++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D+ +MN+TE I+ + A V G I Y +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDRQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL-RALGDGLENKDKFVIESSPSV 423
LE ++R M + +KE TG+DF +E TL AL L K + + V
Sbjct: 316 DLESDFKRIHMVDAIKEQTGVDF---------WQEMTLEEAL--ALAEKHNVEVTEAMGV 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 365 GHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFT 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E AQEK +E +D ++ V D+DF+ ALEY
Sbjct: 425 ELNDPIDQRERFE-------------------AQEKERELGNDEAHGV--DEDFLEALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 464 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>gi|218191199|gb|EEC73626.1| hypothetical protein OsI_08130 [Oryza sativa Indica Group]
Length = 603
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/304 (75%), Positives = 263/304 (86%), Gaps = 3/304 (0%)
Query: 58 DREAVRALRIKKV-EELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
DR R +R V EELR KG EPYAYKWDRTH+ +LQ+ Y HL NGE + VS+
Sbjct: 7 DRRDQREIRNPTVVEELRGKGYEPYAYKWDRTHTTKELQDGYTHLENGE--VCADVAVSI 64
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR+VARRAFGKL F+T+RDDSGTIQLYCEK+ L +QF+QLK +DIGDI+G +GS+K+
Sbjct: 65 AGRIVARRAFGKLVFMTVRDDSGTIQLYCEKDSLTEEQFEQLKTIIDIGDIIGANGSIKK 124
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
TEKGELSV V +F ILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI+ PEVADVFR RAK+
Sbjct: 125 TEKGELSVYVKNFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKV 184
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
VSEIRKT+ES GF+EVETPVLQGAAGGAEARPF+T+HNSL RDLYLRIATELHLKRML+G
Sbjct: 185 VSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITHHNSLQRDLYLRIATELHLKRMLVG 244
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G EK+YEIGRIFRNEG+STRHNPEFTTIEMYEAYSDY+SMMN+ EEIVT CA+A +GKL
Sbjct: 245 GLEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLR 304
Query: 357 IDYQ 360
+DYQ
Sbjct: 305 VDYQ 308
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/241 (66%), Positives = 181/241 (75%), Gaps = 25/241 (10%)
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G EICLERPWRRETMH+LVKEATGIDFN G DL+ AK A G E+ + +++
Sbjct: 367 GTEICLERPWRRETMHSLVKEATGIDFNSFGEDLESAKNA---ARGIKTESNENISLQAC 423
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
SVG++LNEVFE VVE LVQPTFVLDYP+EISPLAKPHRR+AGLTERFELFICGRE+ N
Sbjct: 424 SSVGHVLNEVFETVVESSLVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFICGREIGN 483
Query: 481 AFSELTDPLDQ---------------------RARLEEQVRQHNEKRAAAVSEKSSAQEK 519
AFSELTDP+DQ R R E Q++QHN KRAA E S + K
Sbjct: 484 AFSELTDPIDQLVFGGFDKLEMQRPDLVNMQKRGRFENQIKQHNAKRAAMTKEVKSTEGK 543
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
E DD SYEVTLD+DF+T+LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP+LKIQ
Sbjct: 544 -HEEDDFSYEVTLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQ 602
Query: 580 Q 580
Q
Sbjct: 603 Q 603
>gi|228937379|ref|ZP_04100026.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970265|ref|ZP_04130925.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228976835|ref|ZP_04137248.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|384184160|ref|YP_005570056.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672449|ref|YP_006924820.1| lysine--tRNA ligase LysS [Bacillus thuringiensis Bt407]
gi|423387042|ref|ZP_17364297.1| lysyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|423526624|ref|ZP_17503069.1| lysyl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|452196453|ref|YP_007476534.1| Lysyl-tRNA synthetase (class II) [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782931|gb|EEM31096.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228789500|gb|EEM37419.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228822337|gb|EEM68318.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326937869|gb|AEA13765.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401630296|gb|EJS48102.1| lysyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|402455117|gb|EJV86901.1| lysyl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|409171578|gb|AFV15883.1| lysine--tRNA ligase LysS [Bacillus thuringiensis Bt407]
gi|452101846|gb|AGF98785.1| Lysyl-tRNA synthetase (class II) [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 499
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/519 (45%), Positives = 340/519 (65%), Gaps = 38/519 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
LE W R M + +K+ +G DF + ++AKE + I+ +
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADFWTPMSVEEARELAKEHNVE-------------IKDTM 359
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 360 EVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANA 419
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALE
Sbjct: 420 FTELNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALE 459
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
YGMPP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 460 YGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|257868308|ref|ZP_05647961.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257874419|ref|ZP_05654072.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
gi|257877913|ref|ZP_05657566.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
gi|420263426|ref|ZP_14766063.1| lysyl-tRNA synthetase [Enterococcus sp. C1]
gi|257802422|gb|EEV31294.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257808583|gb|EEV37405.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
gi|257812079|gb|EEV40899.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
gi|394769383|gb|EJF49239.1| lysyl-tRNA synthetase [Enterococcus sp. C1]
Length = 497
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/515 (46%), Positives = 342/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR +G++P+ +++RTH++ +L E++ EE N S+AGR+V +R
Sbjct: 17 VRREKMEKLREEGIDPFGKRFERTHNSAELHELFDQRTK-EELAEMNLSASIAGRIVTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GVSG + +T+ GE+++
Sbjct: 76 GKGKAGFAHLQDREGRIQIYVRKDQVGDEPYEVFK-HADLGDFFGVSGEIMKTDTGEVTI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VIL+K+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 135 KAKEIVILSKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 195 DGHGYIEVETPVLHNQAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D++ +M++TE I+ + A V TI Y G E+
Sbjct: 255 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSV 423
L + R M + +K TG+DF + V + +L K+ V I + +V
Sbjct: 315 DLASDFARIHMVDAIKNQTGVDF---WQPMSVEEARSL--------AKEHHVEITDAMTV 363
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 364 GHIINEFFETFVEETLQQPTFVFGHPVEVSPLAKKNPEDERFTDRFELFIVGREFANAFT 423
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES-DDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E QEK +E+ +D ++ V D+DF+ ALEY
Sbjct: 424 ELNDPIDQRERFE-------------------GQEKEREAGNDEAHGV--DEDFLEALEY 462
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 463 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 497
>gi|403670094|ref|ZP_10935260.1| lysyl-tRNA synthetase [Kurthia sp. JC8E]
Length = 494
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 343/516 (66%), Gaps = 34/516 (6%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVV 121
+ +R K++E+RS+G++P+ +++DRTH ++++E Y +E EN V +AGR++
Sbjct: 9 QQVRRDKMDEIRSQGIDPFGHRFDRTHLTSEVREQYAETT--QEQFEENPVEVVLAGRIM 66
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
+R GK+ F ++D G IQ+Y K+ + D ++ +K D+GDI+GV G++ +T GE
Sbjct: 67 TKRRKGKVTFANIKDFGGQIQIYVRKDVIGEDPYEIVKK-ADLGDIIGVKGNLFKTHVGE 125
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L++ V F L+K L PLP+K+HGL DV++RYRQRY+D+I+ E F R +I+S IR
Sbjct: 126 LTLRVTEFTFLSKGLRPLPEKFHGLQDVEQRYRQRYLDLITSDESMKTFVTRTQIISAIR 185
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ GF+EVETP+L AGGA ARPFVT+HN+L +Y+RIA EL+LKR+++GG EK+
Sbjct: 186 SFLNKKGFLEVETPMLNAVAGGAAARPFVTHHNALDAQMYMRIAIELYLKRLIVGGMEKV 245
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR+FRNEG+STRHNPEFT +E+YEAY+DY+ +MN+TE++ H A V G + Y
Sbjct: 246 YEIGRVFRNEGVSTRHNPEFTLLELYEAYADYEDIMNLTEDLFVHVAEEVLGTTQVQYGE 305
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
I L + W+R M + VKEATG+DF + ++ KE L + I+ +
Sbjct: 306 DMIDLSKGWKRLHMVDAVKEATGVDFFQ-----EMTKEE-----AQALAKEHGIAIKDTM 355
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE VE LVQPTFV +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 356 EVGHIINEFFEQKVEETLVQPTFVYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANA 415
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E Q+ + ++ +D +++ +D+DF+ ALE
Sbjct: 416 FTELNDPIDQRQRFEAQMVEK------------------EQGNDEAHD--MDEDFLEALE 455
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDR++MLLTN+ SIRDV+ FP+++
Sbjct: 456 YGMPPTGGLGIGIDRMIMLLTNAQSIRDVLLFPLMR 491
>gi|403238513|ref|ZP_10917099.1| lysyl-tRNA ligase [Bacillus sp. 10403023]
Length = 497
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 342/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR G++P+ +++RTHS +L ++Y E+ + + V++AGR++ +R
Sbjct: 15 VRREKLHTLREMGVDPFGKRFERTHSTRELIDLYDAFTK-EQLDEKEISVTIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQLY + + +Q++ + D+GDI+GVSG++ +T+ GELS+
Sbjct: 74 GKGKAGFTHIQDLTGQIQLYVRLDAVGEEQYEVFNM-ADLGDIVGVSGTVFKTKVGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V SF +L+K+L PLPDK+HGL DV++RYRQRY+D+I PE + F R+KI+ +R+ +
Sbjct: 133 KVTSFELLSKALRPLPDKFHGLKDVEQRYRQRYLDLIMSPESKETFITRSKIIRAMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDHGYLEVETPMMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE ++ H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLIAHIAQEVLGTTTITYGDDEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + +KE G DF KE +L L + I + G
Sbjct: 313 ELKPEWKRLHMVDAIKEYVGADF---------WKEMSLEE-ARQLAKEHNVEINDNMQYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E KL+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIVNEFFEQKIEDKLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D+DFV ALEYG+
Sbjct: 423 LNDPIDQRQRFEAQLKER------------------EQGNDEAH--MMDEDFVEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 463 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 495
>gi|325568182|ref|ZP_08144623.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
gi|325158383|gb|EGC70534.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
Length = 516
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/515 (46%), Positives = 343/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR +G++P+ +++RTH++ +L E++ EE N S+AGR+V +R
Sbjct: 36 VRREKMEKLREEGIDPFGKRFERTHNSAELHELFDQRTK-EELAEMNLSASIAGRIVTKR 94
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GVSG + +T+ GE+++
Sbjct: 95 GKGKAGFAHLQDREGRIQIYVRKDQVGDEPYEVFK-HADLGDFFGVSGEIMKTDTGEVTI 153
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VIL+K+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 154 KAKEIVILSKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 213
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 214 DGHGYIEVETPVLHNQAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 273
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D++ +M++TE I+ + A V TI Y G E+
Sbjct: 274 GRVFRNEGIDTTHNPEFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEV 333
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSV 423
L + R M + +K TG+DF + + V + +L K+ V I + +V
Sbjct: 334 DLASDFARIHMVDAIKNQTGVDFWQ---PMSVEEARSL--------AKEHHVEITDAMTV 382
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANAF+
Sbjct: 383 GHIINEFFETFVEETLQQPTFVFGHPVEVSPLAKKNPEDERFTDRFELFIVGREFANAFT 442
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES-DDHSYEVTLDDDFVTALEY 542
EL DP+DQR R E QEK +E+ +D ++ V D+DF+ ALEY
Sbjct: 443 ELNDPIDQRERFE-------------------GQEKEREAGNDEAHGV--DEDFLEALEY 481
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 482 GMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 516
>gi|410668914|ref|YP_006921285.1| lysyl-tRNA synthetase LysS [Thermacetogenium phaeum DSM 12270]
gi|409106661|gb|AFV12786.1| lysyl-tRNA synthetase LysS [Thermacetogenium phaeum DSM 12270]
Length = 492
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/516 (47%), Positives = 343/516 (66%), Gaps = 44/516 (8%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K+EE R +G+EP+ ++ A + LAN E E V++AGR+VA+
Sbjct: 14 GVRREKLEEFRKRGVEPFGGRFPVRQRAADI------LANYPEF--EGKDVTIAGRLVAK 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F L+D SG IQ+Y + D ++ K +DIGDI+GV G + T+K E++
Sbjct: 66 RGHGKASFGDLQDFSGRIQIYARLNDMGEDAYELFKK-LDIGDIIGVRGKVFTTKKQEIT 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +++F +L+KSL PLP+K+HGL DVD RYRQRY+D+I PEV +VF KR KI+ R+
Sbjct: 125 VAIDTFQLLSKSLRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKEVFLKRIKIIRAFRRF 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E GF+EVETP++Q AGGA ARPF+T+HN+L DLYLRIA EL+LKR+L+GGFEKI+E
Sbjct: 185 LEGRGFLEVETPMMQPIAGGAAARPFITHHNALDIDLYLRIAPELYLKRLLVGGFEKIFE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
I R FRNEG+ST+HNPEFT +E+Y+AY+DY MM ITE ++T V G + + Y
Sbjct: 245 INRNFRNEGISTKHNPEFTMMELYQAYADYTDMMEITESLITAVVKEVAGSMKVTYGDHV 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I PW + +M + V+E TG DF+ + K ++ +LG IE +P
Sbjct: 305 IDFTPPWAKMSMLDAVREYTGEDFSHC-DPSKARRQAA--SLG----------IEVAPDA 351
Query: 424 --GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
GN++NEVFE +VE +LVQPTF+ +P+E+SPLAK ++ LT+RFELFI E+ANA
Sbjct: 352 GWGNIVNEVFETLVEDRLVQPTFITGHPVEVSPLAKRNKEFPCLTDRFELFINTWEIANA 411
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E+Q+R+ R+ V E + +D+D++TA+E
Sbjct: 412 FSELNDPIDQRMRFEQQLRE----RSRGVEEAHA----------------MDEDYLTAME 451
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPPA G+G+GIDRLVM+LTNS SIRDVI FP ++
Sbjct: 452 YGMPPAGGLGIGIDRLVMILTNSPSIRDVILFPTMR 487
>gi|253681352|ref|ZP_04862150.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|416350390|ref|ZP_11680865.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Stockholm]
gi|253562590|gb|EES92041.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|338196291|gb|EGO88493.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Stockholm]
Length = 510
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/516 (46%), Positives = 340/516 (65%), Gaps = 43/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R++K+ L+ +G +P+ YK +RTH++ Q+++ Y L E +V+VAGR++++R
Sbjct: 31 RMQKLSNLQEQGKDPFDVYKVERTHTSKQVKDNYDEL--------EGKNVTVAGRLMSKR 82
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F +RD G IQLY + + + ++ + K F DIGD + ++G++ +T+ GE+++
Sbjct: 83 VHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTF-DIGDFVSITGTVFKTKTGEVTL 141
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +LTKSL PLP+K+HGL D D RYRQRYVD+I +V + F KR I+ IR+ +
Sbjct: 142 HIVDFKLLTKSLKPLPEKFHGLKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFL 201
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ F+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 202 DNRDFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 261
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + VNG + Y+G EI
Sbjct: 262 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEI 321
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR TM + VKE G+DFNE+ D ++AKE GLE K +
Sbjct: 322 DFKPPWRRITMVDAVKEFAGVDFNEVNTDEEAREIAKEK-------GLELKKEL---KDC 371
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTFV DYP E SPL K R + LTERFE F+ GRE+ NA
Sbjct: 372 TKGDILVALFEEFGEEKLMQPTFVCDYPKENSPLTKKKRGNDALTERFEGFVYGREICNA 431
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP+ Q+ R +Q+++ + DD +Y +DDDF+ ALE
Sbjct: 432 YSELNDPIVQKERFVQQLKER------------------ELGDDEAY--MMDDDFINALE 471
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL+M LT+S+SIRDVI FP +K
Sbjct: 472 IGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFPTMK 507
>gi|347751644|ref|YP_004859209.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
gi|347584162|gb|AEP00429.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
Length = 495
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 338/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR KG++P+ +++RT +L++ Y E+ + V++AGR++ +R
Sbjct: 12 VRKEKMEALREKGVDPFGKRFERTTDTEELKQKYGECTE-EQLEEKEIPVAIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
G+ F ++D G IQ Y ++ + +Q++ K D+GDI+G+ G++ RT+ GELSV
Sbjct: 71 RKGRAGFAHIQDLKGQIQFYIRQDAVGEEQYELFKS-TDLGDIVGLKGTVFRTKVGELSV 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F++LTK+L PLPDK+HGL D+++RYRQRY+D+I E + F R++I+ IR +
Sbjct: 130 KVKEFILLTKALRPLPDKFHGLRDIEQRYRQRYLDLIMSEESKNTFITRSRIIQSIRNYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DKNGYLEVETPMMHAIAGGAAARPFITHHNALDIDLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E+YEAY+D+ +M +TE ++ H A V G TI Y E+
Sbjct: 250 GRVFRNEGIDTRHNPEFTMLELYEAYADFNDIMQLTENMIVHTAKEVLGTTTIRYGEHEV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE WRR M + +KE TG+DF V RAL + I G
Sbjct: 310 NLEPEWRRLHMVDAIKEYTGVDF------WNVTSTEEARALA----KEHHIEITEHMEYG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTFV +P+EISPLA+ + + T+RFELFI GRE ANAF+E
Sbjct: 360 HIVNEFFEQRVEEKLIQPTFVYGHPVEISPLARKNEKDPRFTDRFELFIVGREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R Q+++ ++ +D +++ +D+DF+ ALEYGM
Sbjct: 420 LNDPIDQRERFVNQLKER------------------EQGNDEAHQ--MDEDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLTN+ SIRDV+ FP++K
Sbjct: 460 PPTGGLGIGVDRLVMLLTNAPSIRDVLLFPLMK 492
>gi|352518621|ref|YP_004887938.1| lysyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
gi|348602728|dbj|BAK95774.1| lysyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
Length = 497
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 339/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+ KG++P+ +++DRTHS+N++ E + EE N SVAGR+V++R
Sbjct: 17 VRRQKMEELQEKGIDPFGHRFDRTHSSNEIHEEFDDKTK-EELNEIGLAASVAGRMVSKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + D +D K D+GD LGV+G + +T GE+SV
Sbjct: 76 GKGKVGFAHLQDREGQIQIYVRKDEVGEDNYDIFKK-ADLGDFLGVTGEIMKTNTGEVSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+LTK+L PLP+KYHGLT+V++RYRQRY+D+IS + + F+KR++I+SEIR+ +
Sbjct: 135 KAEKVTLLTKALRPLPEKYHGLTNVEQRYRQRYLDLISNRDSFERFKKRSQIISEIRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 195 DHRGYLEVETPVLHNQAGGAAARPFVTHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+++ +M++TE I+ + V G + Y G +
Sbjct: 255 GRVFRNEGIDTTHNPEFTMLECYTAYANFGDVMDLTEGIIRNVTKNVLGTTQLSYDGQTV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L + R + + +KE TG+DF + L+ A+E L K K I + VG
Sbjct: 315 DLGTDFARLHIVDAIKEYTGVDFWQ-DISLEQARE---------LAKKHKVAITDAMGVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTFV +P+E+SPLAK + T+RFELFI E ANAF+E
Sbjct: 365 HIINEFFETFVEDNLQQPTFVYGHPVEVSPLAKKSQDDPRFTDRFELFIVNHEFANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ EK A +E++ +D+DF+ +LEYGM
Sbjct: 425 LNDPIDQRKRFEEQ-----EKERIAGNEEAHG---------------VDEDFLESLEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLT++ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLIMLLTDAQSIRDVLLFPTMR 497
>gi|332638688|ref|ZP_08417551.1| lysyl-tRNA synthetase [Weissella cibaria KACC 11862]
Length = 494
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 342/513 (66%), Gaps = 34/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R K+ ELR G++P+ ++++RTH+A QL E+Y E+ ++ V++AGR++ +R
Sbjct: 15 RRDKMAELRDAGIDPFGHRFERTHTAAQLHELYDD-TTAEDLEAQAIEVTIAGRMMTKRR 73
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK++F ++D SG IQ++ +K + + ++ LK D+GDILG +G++ +T GELS+
Sbjct: 74 SGKISFADIKDRSGRIQVFVQKPVVGEEAYELLKK-SDLGDILGFTGTVMKTRAGELSIN 132
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + LTK+L PLPDK+HGLTDV+ +YRQRY+D+IS + + F KR+KI++ IR ++
Sbjct: 133 VTALTHLTKALRPLPDKFHGLTDVETKYRQRYLDLISNEDSFERFVKRSKIITAIRHYLD 192
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP+LQ AGGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG E++YEIG
Sbjct: 193 GEGFIEVETPMLQNEAGGASARPFITHHNALDIDLYMRIALELHLKRLIVGGMERVYEIG 252
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ +HNPEFT IE Y AY +++ +M TE I+ A AV L + YQG +I
Sbjct: 253 RVFRNEGMDPKHNPEFTVIETYAAYWNFEDVMVETENIIKAAAAAVTDDLKVTYQGHDID 312
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSVG 424
L +P+ R+ M +L+KE TG+DF + RA+ D DK V E VG
Sbjct: 313 LAQPFARKHMVDLIKETTGVDF------WQPMTIEEARAIAD-----DKGVKYEQYWGVG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTFV +P+E+SPLAK + T+RFELFI G E NAF+E
Sbjct: 362 HIINEFFEEFVEDTLIQPTFVYGHPVEVSPLAKKNETDDRFTDRFELFIVGAEYGNAFTE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q V+E+ + ++ + +D+DF+ ALEYGM
Sbjct: 422 LNDPIDQRERFEAQ-----------VAERDAGNDEAE---------GIDEDFIEALEYGM 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ +IRDV+ FP ++
Sbjct: 462 PPTGGLGIGIDRLVMLLTDTDTIRDVLLFPTMR 494
>gi|94267598|ref|ZP_01290933.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
gi|93451927|gb|EAT02649.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
Length = 493
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/525 (46%), Positives = 341/525 (64%), Gaps = 36/525 (6%)
Query: 56 TSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
D V A R +K EL +G++ YA + +H +L E+ + +
Sbjct: 3 NDDSNQVIAQRRRKASELSEQGVDIYAAGFKPSHRIKELLP-----GPDPEAALAGGNKA 57
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
VAGR++A R FGK AFL L+D SG IQ++ +++ + + K F D+GDI SG +
Sbjct: 58 VAGRIMALRRFGKAAFLHLQDSSGRIQVHVKRDEIGQQAYATFKKF-DVGDIAAFSGPLF 116
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RT+ GE+++ S +LTKSL PLP+K+HGLTD++ RYRQRYVD++ PEV D FR+R +
Sbjct: 117 RTKTGEVTIQALSVKLLTKSLRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRRRVE 176
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I+ +R + + GF+EVETP++Q AGGA A+PF T+HN+LG DLYLRIA EL+LKR+L+
Sbjct: 177 IIHLVRDFLTNRGFLEVETPMMQAIAGGATAKPFKTHHNALGLDLYLRIAPELYLKRLLV 236
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFE+++EI R FRNEGLSTRHNPEFT +E Y+AY+ Y +M + EE+++ A+ V G +
Sbjct: 237 GGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYDELMELAEEMLSWVAMEVCGTM 296
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I+YQG E+ L PWRR TM + G+D L +D KE AL G+E
Sbjct: 297 QINYQGQEVDLAPPWRRYTMDEALVAVGGLD-AALLDDFAALKEL---ALKKGVE----- 347
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
++ +G + E+FE++VE KL+ PTF+ YP E+SPLA+ ++ + +T+RFELFI G
Sbjct: 348 -LQPQAGIGKVKTELFELLVEDKLIDPTFITAYPTEVSPLARRNQENPEITDRFELFITG 406
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
REMANAFSEL DP DQR RLE+Q+ + SD+ + V LD+D
Sbjct: 407 REMANAFSELNDPDDQRQRLEKQIAERG-------------------SDEEIFPV-LDED 446
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
F+ ALEYGMPPA+G G+GIDRL MLLT++ SIRDVI FP L+ ++
Sbjct: 447 FLRALEYGMPPAAGCGVGIDRLTMLLTDAPSIRDVILFPHLRPEK 491
>gi|94270667|ref|ZP_01291795.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
gi|93450711|gb|EAT01789.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
Length = 495
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/523 (46%), Positives = 340/523 (65%), Gaps = 36/523 (6%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
D V A R +K EL +G++ YA + +H +L E+ + +VA
Sbjct: 7 DSNQVIAQRRRKASELSEQGVDIYAAGFKPSHRIKELLP-----GPDPEAALAGGNKAVA 61
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR++A R FGK AFL L+D SG IQ++ +++ + + K F D+GDI SG + RT
Sbjct: 62 GRIMALRRFGKAAFLHLQDSSGRIQVHVKRDEIGQQAYATFKKF-DVGDIAAFSGPLFRT 120
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
+ GE+++ S +LTKSL PLP+K+HGLTD++ RYRQRYVD++ PEV D FR+R +I+
Sbjct: 121 KTGEVTIQALSVKLLTKSLRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRRRVEII 180
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+R + + GF+EVETP++Q AGGA A+PF T+HN+LG DLYLRIA EL+LKR+L+GG
Sbjct: 181 RLVRDFLTNRGFLEVETPMMQAIAGGATAKPFKTHHNALGLDLYLRIAPELYLKRLLVGG 240
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE+++EI R FRNEGLSTRHNPEFT +E Y+AY+ Y +M + EE+++ A+ V G + I
Sbjct: 241 FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYDELMELAEEMLSWVAMEVCGTMQI 300
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
YQG E+ L PWRR TM + G+D L +D KE AL G+E +
Sbjct: 301 SYQGQEVDLAPPWRRYTMDEALVAVGGLD-AALLDDFAALKEL---ALKKGVE------L 350
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ +G + E+FE++VE KL+ PTF+ YP E+SPLA+ ++ + +T+RFELFI GRE
Sbjct: 351 QPQAGIGKVKTELFELLVEDKLIDPTFITAYPTEVSPLARRNQENPEITDRFELFITGRE 410
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
MANAFSEL DP DQR RLE+Q+ + SD+ + V LD+DF+
Sbjct: 411 MANAFSELNDPDDQRQRLEKQIAERG-------------------SDEEIFPV-LDEDFL 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
ALEYGMPPA+G G+GIDRL MLLT++ SIRDVI FP L+ ++
Sbjct: 451 RALEYGMPPAAGCGVGIDRLTMLLTDAPSIRDVILFPHLRPEK 493
>gi|373107725|ref|ZP_09522017.1| lysine-tRNA ligase [Stomatobaculum longum]
gi|371650310|gb|EHO15770.1| lysine-tRNA ligase [Stomatobaculum longum]
Length = 650
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/534 (45%), Positives = 342/534 (64%), Gaps = 46/534 (8%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYK-WDRTHSANQLQEIYRHLANGEE 106
+ +S + D + +R+ K+ EL++ G +P+ ++++H A +++ + L + E
Sbjct: 5 KKNSEAQEQQDVHRLMQVRLDKLNELKAAGKDPFEITTYEQSHHAAEIKAHFDELKDTE- 63
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
VSVAGR++++R GK +F +RD SG IQ+Y ++ + + + Q K + DIGD
Sbjct: 64 -------VSVAGRMMSKRIMGKASFCAVRDLSGDIQIYVARDAVGEEAYAQFKKY-DIGD 115
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV G + T+ GE+S+ +LTKS+ PLP+K+HGLTD D+RYRQRY+D++ PEV
Sbjct: 116 IIGVRGKVFETKTGEISIHAEELTLLTKSMQPLPEKFHGLTDTDQRYRQRYIDLVMNPEV 175
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+ F KR+KI+S IR+ ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+
Sbjct: 176 RETFVKRSKIISSIRRYLDDRGFMEVETPMLVSNAGGAAARPFETHYNALSEDVKLRISL 235
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
EL+LKR+++GG E++YEIGR+FRNEGL RHNPEFT +E+Y+AY+DY+ MMN+TE++ H
Sbjct: 236 ELYLKRLIVGGLERVYEIGRVFRNEGLDARHNPEFTLMELYQAYTDYEGMMNLTEDMFRH 295
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLR 403
A VNG I Y G EI LE+P+RR TM VKE +G+DF L VAKE ++
Sbjct: 296 VAREVNGSAKIMYSGTEIDLEKPFRRITMTEAVKEYSGVDFATIETLEEARAVAKEKSV- 354
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
E G++LN FE E ++QPTFV D+PIEISPL K +
Sbjct: 355 ------------AFEERHQRGDILNLFFETFCEEHMIQPTFVTDHPIEISPLTKKKPNNP 402
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
ERFELFI GREM NA+SEL DP+DQR R + Q + AAA E++
Sbjct: 403 DYVERFELFIYGREMCNAYSELNDPIDQRERFKAQ-----DALAAAGDEEA--------- 448
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+H+ D+DF+ AL GMPP G+G GIDRLVMLLT+S +IRDV+ FP +K
Sbjct: 449 -NHT-----DEDFLNALNVGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLFPTMK 496
>gi|421186991|ref|ZP_15644371.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB418]
gi|399964698|gb|EJN99333.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB418]
Length = 496
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/527 (45%), Positives = 350/527 (66%), Gaps = 36/527 (6%)
Query: 54 TSTSDREAVRALRIK--KVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
T D E LR++ K++ L+ G++P+ ++++R A + + + EE ++
Sbjct: 2 TEKIDTELNDQLRVRRQKLQALKDDLGIDPFGHRFERDSYAKDIHSFADNKSK-EELDAA 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
HV +AGR++A+R GK+ F +RD SGT+Q+Y ++ L +D + ++ D+GDILG
Sbjct: 61 KKHVVIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDL-ADNYALIRR-ADLGDILGF 118
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG++ +T+ GE +VL++ L+K+L PLPDKYHGLTD+D RYR+RY+D+IS P+ +VF
Sbjct: 119 SGTVMKTDAGETTVLIDKLTWLSKALRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVF 178
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR+KIV IR ++S+GF+EVETP+LQ +AGGA ARPFVT+HN+L D+YLRIATEL+L
Sbjct: 179 IKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMYLRIATELYL 238
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG E++YEIGRIFRNEG+ TRHNPEFTT+E Y AY D +M TE I+ A +
Sbjct: 239 KRLIVGGMERVYEIGRIFRNEGMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKS 298
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
VN IDYQG +I L + + + +M L+KE TGIDF D K+ ET + L D E
Sbjct: 299 VNEDGVIDYQGQQIDLSKDFAKRSMTELIKEKTGIDF-----DKKIDLETA-QKLAD--E 350
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
N K+ E+ VG+++ E F+ VE L++PTFV +P+E+SPLAK + +RFE
Sbjct: 351 NNVKY--ENFWGVGHIIAEFFDTFVEKSLIEPTFVYHFPLEVSPLAKKEDDNPDFVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L+I G E ANAF+EL DP+DQR R E Q +E+ + ++ +
Sbjct: 409 LYIAGGEYANAFTELNDPIDQRQRFEAQ-----------AAERENGNDEAE--------- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+D++ ALE+GM P G+G+GIDRL MLLTN SIRDV+ FP ++
Sbjct: 449 SIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSIRDVLLFPTMR 495
>gi|336112743|ref|YP_004567510.1| lysyl-tRNA synthetase [Bacillus coagulans 2-6]
gi|335366173|gb|AEH52124.1| lysyl-tRNA synthetase [Bacillus coagulans 2-6]
Length = 495
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 337/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR KG++P+ +++RT +L++ Y E+ + V++AGR++ +R
Sbjct: 12 VRKEKMEALREKGVDPFGKRFERTTDTEELKQKYGECTE-EQLEEKEIPVAIAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
G+ F ++D G IQ Y ++ + +Q++ K D+GDI+G+ G++ RT+ GELSV
Sbjct: 71 RKGRAGFAHIQDLKGQIQFYIRQDAVGEEQYELFKS-TDLGDIVGLKGTVFRTKVGELSV 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F++LTK+L PLPDK+HGL D+++RYRQRY+D+I E + F R++I+ IR +
Sbjct: 130 KVKEFILLTKALRPLPDKFHGLRDIEQRYRQRYLDLIMSEESKNTFITRSRIIQSIRNYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DKNGYLEVETPMMHAIAGGAAARPFITHHNALDIDLYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E+YEAY+D+ +M +TE ++ H A V G I Y E+
Sbjct: 250 GRVFRNEGIDTRHNPEFTMLELYEAYADFNDIMQLTENMIVHTAKEVLGTTAIRYGEHEV 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE WRR M + +KE TG+DF V RAL + I G
Sbjct: 310 NLEPEWRRLHMVDAIKEYTGVDF------WNVTSTEEARALA----KEHHIEITEHMEYG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTFV +P+EISPLA+ + + T+RFELFI GRE ANAF+E
Sbjct: 360 HIVNEFFEQRVEEKLIQPTFVYGHPVEISPLARKNEKDPRFTDRFELFIVGREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R Q+++ ++ +D +++ +D+DF+ ALEYGM
Sbjct: 420 LNDPIDQRERFVNQLKER------------------EQGNDEAHQ--MDEDFIEALEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLTN+ SIRDV+ FP++K
Sbjct: 460 PPTGGLGIGVDRLVMLLTNAPSIRDVLLFPLMK 492
>gi|262038760|ref|ZP_06012117.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261747218|gb|EEY34700.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 493
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 340/512 (66%), Gaps = 38/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
++KKVEEL+ G+EPY K+++ N ++E+ ++ + + AGR+VA R
Sbjct: 14 KLKKVEELKEAGIEPYGRKYEKI---NNIEEVNQY------DETSDKVFKTAGRIVAFRR 64
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D +G +Q Y +K+ + +Q++ K + +GD +G+ G++ RT+ GEL++
Sbjct: 65 MGKNGFGHIQDPTGKLQYYVKKDEVGEEQYEIYKK-LGLGDFIGIEGTLFRTQTGELTLR 123
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
SF +L+K++ PLP+K+HGLT+V+ RYRQRYVD++ EV D +KR +IV RK +E
Sbjct: 124 AKSFEVLSKNIRPLPEKFHGLTNVETRYRQRYVDLVMNSEVMDTMKKRFQIVRFFRKYLE 183
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF EVETP++ AGGA ARPF T+HN+L +L+LR+A EL+LKR+L+GGFEK++EI
Sbjct: 184 EKGFTEVETPMMHPIAGGATARPFTTHHNALDMELFLRVAPELYLKRLLVGGFEKVFEIN 243
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S +HNPEFT +E+Y+AY+DY MMNITE++++ ++G I+Y+G +I
Sbjct: 244 RSFRNEGISIKHNPEFTMMELYQAYADYVDMMNITEDLISKLTFELHGTYEIEYEGKKIN 303
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+E PWRR M ++VKE TG DF+ + +D T + L LE KD+ + +
Sbjct: 304 MESPWRRVKMKDIVKEVTGFDFDTVTSDEDAV--TKAKELQIPLE-KDR-----TYTKYG 355
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
+LN +FE VE L+ PTF+++YP EISPL+K + +RFELFI GRE ANA+SEL
Sbjct: 356 ILNLIFEEKVESTLINPTFIIEYPKEISPLSKNKKGETDWVDRFELFISGREFANAYSEL 415
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP DQ+ R EEQV K+KE+ D + +D D++ ALEYGMP
Sbjct: 416 NDPRDQKERFEEQV-------------------KMKEAGDDEAQ-NMDLDYIRALEYGMP 455
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA G+G+GIDRLVML+TNSASIRDVI FP L+
Sbjct: 456 PAGGLGIGIDRLVMLMTNSASIRDVILFPTLR 487
>gi|410458828|ref|ZP_11312584.1| lysyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
gi|409931015|gb|EKN68005.1| lysyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
Length = 495
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 344/513 (67%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ + R KG++P+ +++R+ + L+E Y + EE ++ VSVAGR++ +R
Sbjct: 12 VRREKLAQFRDKGIDPFGKRFERSDTTKSLKEQYDQFSK-EELEEKSIVVSVAGRIMTKR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G +Q+Y ++ + +Q++ D+GDI+GVSG + +T+ GELS+
Sbjct: 71 GKGKAGFAHIQDLNGQVQIYVRQDAVGEEQYETFDK-ADLGDIVGVSGEVFKTKVGELSI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F L+K+L PLPDK+HGL D+++RYRQRY+D+I+ E F R+KI+ +R+ +
Sbjct: 130 KVKEFTFLSKALRPLPDKFHGLKDIEQRYRQRYLDLITSMESRGTFITRSKILQSMRRYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 190 DDRGYLEVETPMMHSIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+D+ +M++TE ++ H A V G T+ Y EI
Sbjct: 250 GRVFRNEGISTRHNPEFTMIELYEAYADFNDIMDLTENMIAHIAKEVLGSTTVQYGDNEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R + + +KE G+DF + +D +E + A +E KD + G
Sbjct: 310 NLEPKWTRLHIVDAIKEYVGVDFWKKMSD----EEARVLAKEHNIEIKDNM------TFG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 360 HIVNEFFEQRVEEKLIQPTFIYGHPVEISPLAKKNDEDKRFTDRFELFIVAREHANAFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ RA E +D ++ +D+D++ A+EYGM
Sbjct: 420 LNDPIDQKERFEAQLKE----RA--------------EGNDEAH--MMDEDYIEAMEYGM 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP+++
Sbjct: 460 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMR 492
>gi|150014997|ref|YP_001307251.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149901462|gb|ABR32295.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 501
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/521 (47%), Positives = 336/521 (64%), Gaps = 43/521 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
LR K+ EL+ G +P+ YK +RTH++ +++ Y L E V+VAGR+++
Sbjct: 20 GLRRAKLAELQGAGKDPFDVYKVNRTHTSEEVKANYDAL--------EGKEVTVAGRLMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + +++ + Q K F D+GD + +G + T+ GE+
Sbjct: 72 KRGQGKVVFSDIHDKDGKIQLFLKIDKVGEENLKQYKTF-DLGDWIAATGEVFTTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV VN+F + KSL PLP+K+HGL D D RYRQR VD+I+ EV D F KR+KI+S IR+
Sbjct: 131 SVNVNTFELTCKSLKPLPEKWHGLKDPDLRYRQREVDIITNTEVKDTFIKRSKIISAIRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ F+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDAKSFIEVETPILGAIAGGAAAKPFITHHNTLDMDMYLRIATELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V + VNG + YQG
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYICEKVNGTTKVAYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIES 419
EI + PWRR TM + VKE G+DFNE+ +D +AKE L L K
Sbjct: 311 EIDFKPPWRRITMVDAVKEYAGVDFNEIKSDDEAQTIAKEKHLE-FAKPLNTVTK----- 364
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
G +LN ++E E ++QPTFV DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 365 ----GEVLNALYEEFGEANMIQPTFVTDYPVEISPLTKKKRGNPEFTERFEGFVFGRELC 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NA+SEL DP+ QR R E+Q ++ + DD +Y LD+ F++A
Sbjct: 421 NAYSELNDPIVQRQRFEQQAKER------------------ELGDDEAY--MLDEQFMSA 460
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LE GMPP GMG+GIDRL+M LT+SASIRDVI FP ++ Q+
Sbjct: 461 LETGMPPTGGMGMGIDRLIMFLTDSASIRDVILFPTMRPQK 501
>gi|182420117|ref|ZP_02951351.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237669572|ref|ZP_04529552.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376154|gb|EDT73741.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237655016|gb|EEP52576.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 501
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/524 (45%), Positives = 342/524 (65%), Gaps = 49/524 (9%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
LR +K+ EL+ +P+ YK +RTH+ ++++ Y L E V++AGR+++
Sbjct: 20 GLRREKLAELQKADKDPFDVYKVNRTHTTGEVRDNYEEL--------EGKEVTIAGRIMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G +QL+ + +++ + + K + DIGD + +G + T++GE+
Sbjct: 72 KRGQGKVVFSDIHDKDGKMQLFLKIDKVGEENLKEYKTY-DIGDWVAATGEVFTTQRGEI 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ VNSF + KSL PLP+K+HGL D D RYRQR +D+I+ EV D F KR++I+S +R+
Sbjct: 131 SINVNSFELTCKSLKPLPEKWHGLKDPDLRYRQRELDIITNSEVKDTFVKRSRIISAMRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA A+PFVT+HN+L D++LRIA EL+LKR+++ GFEK+Y
Sbjct: 191 FLDNRGFLEVETPILSPIAGGAAAKPFVTHHNTLDMDMFLRIAPELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V + +NG + YQG
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYVCEKINGTTKVTYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTL---RALGDGLENKDKFV 416
EI PWRR TM + VKE G+DF + +D + +AKE L + L
Sbjct: 311 EIDFMPPWRRITMVDAVKEYAGVDFTTINSDEEAQAIAKEKNLEFPKPL----------- 359
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
++ + G +LN ++E E K++QPTF++DYP+E SPL K R +A TERFE F+ GR
Sbjct: 360 --NTVTKGEVLNALYEEFGEEKMIQPTFIMDYPVENSPLTKKKRGNAEFTERFEAFVFGR 417
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E+ NA+SEL DP+ QR R E+Q ++A+E DD +Y LD+ F
Sbjct: 418 ELGNAYSELNDPIVQRERFEQQ---------------ANAREL---GDDEAY--MLDEQF 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
++ALE GMPP G+G+GIDRL+M LT+SASIRDVI FP +K Q+
Sbjct: 458 MSALETGMPPTGGLGIGIDRLIMFLTDSASIRDVILFPTMKPQK 501
>gi|392531788|ref|ZP_10278925.1| lysine--tRNA ligase [Carnobacterium maltaromaticum ATCC 35586]
gi|414082585|ref|YP_006991285.1| lysyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
gi|412996161|emb|CCO09970.1| lysyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
Length = 499
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 335/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E+LR K ++P+ +++RTH +++L E Y EE + + +VAGR++ +R
Sbjct: 17 VRREKMEQLREKNIDPFGERFERTHLSSELHEAYDRFTK-EELVEQKETATVAGRIMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + D +D K D+GD +GV+G + +T+ GE+++
Sbjct: 76 GKGKVGFAHLQDRKGQIQIYVRKDAVGDDAYDIFKN-ADLGDFIGVTGEVMKTDTGEVTI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S V L+K+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+ E+R +
Sbjct: 135 KPTSLVQLSKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFTKRSEIIREVRNYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++EVETP L AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG EK+YEI
Sbjct: 195 NEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELYLRIALELHLKRLIVGGMEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E+Y AY+DY+ +M++TE ++ A V G I Y V +
Sbjct: 255 GRVFRNEGVDTTHNPEFTMLEVYTAYTDYKDVMDLTEGLIKTVANRVLGTGEITYGEVTV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R+ M + +KE +G+DF V + RAL ++ I G
Sbjct: 315 DLDTKWKRQHMLDAIKEYSGVDF------WPVMSDEEARALA----KENNVTITEHMQYG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFE+FI G E NAF+E
Sbjct: 365 HVVNEFFETFVEEKLIQPTFIYGHPVEISPLAKKNPQDGRFTDRFEVFIVGNEYGNAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+R+ RA E LD+DF+ ALEYGM
Sbjct: 425 LNDPIDQRERFEAQMRE----RAGGNDEAHQ----------------LDEDFLEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++++IRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTDASAIRDVLLFPTMR 497
>gi|374992869|ref|YP_004968368.1| lysyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211235|gb|AET65853.1| lysyl-tRNA synthetase (class II) [Desulfosporosinus orientis DSM
765]
Length = 494
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 338/516 (65%), Gaps = 45/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+E R + P+A ++ RTH +++ + + L E VS+AGR++++R
Sbjct: 10 IRLDKLEMFRQADINPFADRYVRTHKTSEILDRFEEL--------EGQEVSLAGRIMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G +Q+Y + L F+ + F D+GDI+GV G + RT++GE+S+
Sbjct: 62 DQGKVIFTHIQDIDGRLQIYIRMDDLGQAMFELISKF-DVGDIIGVQGKVFRTKRGEISI 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+K++ PLP+K+HGLT+V+ RYR+RY+D++ P+V VF R+KI+ +R+ +
Sbjct: 121 HAKEVTLLSKAMRPLPEKFHGLTNVETRYRRRYLDLVMNPDVRKVFVTRSKIIRFMREFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E F+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GG EK++EI
Sbjct: 181 EERDFLEVETPTLHTIPGGAAARPFITHHNALDIDLYLRIALELPLKRLIVGGLEKVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++Y+ +M +TEE++ H ++G L I YQG +
Sbjct: 241 GRTFRNEGISIKHNPEFTMMELYQAYANYEDIMELTEEMIAHIVQRIHGTLEITYQGQAL 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR M + + E +G+DF ++ D L VAKE L D
Sbjct: 301 QFKTPWRRLPMLDGILEYSGVDFKDIATDEQALLVAKEKGLHVAADA------------- 347
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G ++NE FE VEP L+QPTF++ +P+EISPLAK + + T+RFE FI GRE+ANA
Sbjct: 348 SRGKIINEFFEAFVEPNLIQPTFIIGHPVEISPLAKRNAKQPEYTDRFEAFIFGRELANA 407
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E Q V+E++ DD ++ ++D+DFV ALE
Sbjct: 408 FSELNDPIDQRQRFEAQ-----------VAERAKG-------DDEAH--SMDEDFVQALE 447
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDRLVMLLT+SASIRDVI FP ++
Sbjct: 448 YGLPPTGGLGIGIDRLVMLLTDSASIRDVILFPTMR 483
>gi|456370531|gb|EMF49427.1| Lysyl-tRNA synthetase (class II) [Streptococcus parauberis
KRS-02109]
Length = 500
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 339/517 (65%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + N+ VAGR++ +R
Sbjct: 19 VRREKMTALAEQGIDPFGKRFERTANSAQLKEKYSDKSK-EELHDLNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDAVGEENYDIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ + F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGMDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE+Y+AY+DYQ +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTTIEVYQAYADYQDIMNLTEGIIQHAANAVKGDGPIDYQGNEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+ +P++R M + +KE TGIDF + + L +AKE + LE +
Sbjct: 317 LINQPFKRVHMVDAIKEVTGIDFWPEMSIEDALALAKEKHIP-----LE-------KHFT 364
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANA
Sbjct: 365 SVGHIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANA 424
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
F+EL DP+DQ +R E AQ + KE DD + +D DFV AL
Sbjct: 425 FTELNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEAL 463
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 464 EYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|333904649|ref|YP_004478520.1| SARP family DNA-binding transcriptional activator [Streptococcus
parauberis KCTC 11537]
gi|333119914|gb|AEF24848.1| lysyl-tRNA synthetase [Streptococcus parauberis KCTC 11537]
Length = 496
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 339/517 (65%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + N+ VAGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFERTANSAQLKEKYSDKSK-EELHDLNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDAVGEENYDIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ + F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGMDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE+Y+AY+DYQ +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEVYQAYADYQDIMNLTEGIIQHAANAVKGDGPIDYQGNEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+ +P++R M + +KE TGIDF + + L +AKE + LE +
Sbjct: 313 LINQPFKRVHMVDAIKEVTGIDFWPEMSIEDALALAKEKHIP-----LE-------KHFT 360
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANA
Sbjct: 361 SVGHIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANA 420
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
F+EL DP+DQ +R E AQ + KE DD + +D DFV AL
Sbjct: 421 FTELNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEAL 459
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|288905716|ref|YP_003430938.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|306831812|ref|ZP_07464968.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325978748|ref|YP_004288464.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338167|ref|YP_006034336.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732442|emb|CBI14014.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|304426010|gb|EFM29126.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325178676|emb|CBZ48720.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280803|dbj|BAK28377.1| lysyl-tRNA synthetase, class II [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 496
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/514 (45%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTK-EELHEINKTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKK-ADLGDFLGIEGEIMRTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ +YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETKYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIA ELHLKR+++GG EK+YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFT IE+YEAY+D++ +M+ITE I+ H + AVNG I YQG EI
Sbjct: 253 GRVFRNEGMDVTHNPEFTMIELYEAYADFKDIMDITEGIIQHASKAVNGDGPISYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF KE TL + K+ V + SVG
Sbjct: 313 AIDQPFKRVHMVDAIKEVTGVDF---------WKEMTLEEAQAIAKEKNVPVEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E NA+SE
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAYSE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|420155400|ref|ZP_14662262.1| lysine--tRNA ligase [Clostridium sp. MSTE9]
gi|394759178|gb|EJF41957.1| lysine--tRNA ligase [Clostridium sp. MSTE9]
Length = 501
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/514 (46%), Positives = 336/514 (65%), Gaps = 39/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYK-WDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K+ L+ G +P+ DR A +++ + + E V +AGR+++
Sbjct: 23 IRRDKLTALQQAGKDPFEITVCDRNAFAQDIRDRFEEI--------EGQDVVIAGRIMSW 74
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F+ ++D +G IQ+Y + + + + + L+ + DIGD+ VSG + RT +GE+S
Sbjct: 75 RDMGKASFMDIQDRTGRIQVYLKIDDIGEEAYHGLQNW-DIGDLASVSGFVFRTRRGEIS 133
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V S +L KSLLPLPDK+HGL D D RYRQRYVD+I PEV F KR+++++ IR+
Sbjct: 134 VHAKSITLLGKSLLPLPDKFHGLKDTDLRYRQRYVDLIVNPEVKSTFEKRSRVIATIRRI 193
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G+VEVETPVL GGA ARPF+T+HN+L DLYLRIA EL+LKR+++GG EK+YE
Sbjct: 194 LDERGYVEVETPVLNLIPGGAAARPFITHHNTLDLDLYLRIAPELYLKRLIVGGMEKVYE 253
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+ +HNPEFTTIE+YEAY+DY MM++TE ++ CA V G I YQG E
Sbjct: 254 IGRLFRNEGMDVKHNPEFTTIELYEAYTDYHGMMDLTERLINACAKEVCGTEEITYQGEE 313
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L+ P+ R TM++ +K+ TG+DF D T+RAL + K F +++ S
Sbjct: 314 VSLKLPFCRMTMNDAIKQYTGVDFLSFKGD-------TVRALEEA--KKFHFETKATDSW 364
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE +LVQPTF+ DYP+E+SPL K + L ERFELF RE ANA+S
Sbjct: 365 GDIMNLFFEEKVEGELVQPTFIYDYPVEVSPLTKRKKDVPELVERFELFATRREFANAYS 424
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R Q+ +L+E+ D + +D+DF+TALEYG
Sbjct: 425 ELNDPVDQRERFMRQM-------------------QLREAGDEEANM-IDEDFLTALEYG 464
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP GMG+GIDRLVMLLT+SASIRDV+ FP +K
Sbjct: 465 MPPTGGMGMGIDRLVMLLTDSASIRDVLLFPTMK 498
>gi|457095888|gb|EMG26359.1| Lysyl-tRNA synthetase [Streptococcus parauberis KRS-02083]
Length = 500
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/517 (47%), Positives = 338/517 (65%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + N+ VAGR++ +R
Sbjct: 19 VRREKMTALAEQGIDPFGKRFERTANSAQLKEKYADKSK-EELHDLNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDAVGEENYDIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ + F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGMDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE+Y+AY+DYQ +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTTIEVYQAYADYQDIMNLTEGIIQHAANAVKGDGPIDYQGNEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+ +P++R M + +KE TGIDF + + L +AKE K + +
Sbjct: 317 LINQPFKRVHMVDAIKEVTGIDFWPEMSIEDALALAKE------------KHVPLEKHFT 364
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANA
Sbjct: 365 SVGHIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANA 424
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
F+EL DP+DQ +R E AQ + KE DD + +D DFV AL
Sbjct: 425 FTELNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEAL 463
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 464 EYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|410726018|ref|ZP_11364278.1| lysyl-tRNA synthetase (class II) [Clostridium sp. Maddingley
MBC34-26]
gi|410601450|gb|EKQ55961.1| lysyl-tRNA synthetase (class II) [Clostridium sp. Maddingley
MBC34-26]
Length = 501
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/521 (46%), Positives = 342/521 (65%), Gaps = 43/521 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
LR K+ EL++ G +P+ YK DRTH++ +++ Y L E V+VAGR+++
Sbjct: 20 GLRRAKLAELQNSGKDPFDVYKVDRTHTSEEVKANYDEL--------EGKEVTVAGRLMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + +++ + Q K +D+GD + +G + T+ GE+
Sbjct: 72 KRGQGKVVFSDIHDRDGKIQLFLKIDKVGEENLKQYKS-LDLGDWVAATGEVFTTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ VN+F + KSL PLP+K+HGL D D RYRQR VD+I+ EV D F KR+KI+S +R+
Sbjct: 131 SINVNTFELNCKSLKPLPEKWHGLKDPDLRYRQREVDIITNAEVKDTFFKRSKIISAMRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDNKGFLEVETPILGAIAGGAAAKPFITHHNTLDMDMYLRIATELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V + +NG + YQG
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYICEKINGTTKVTYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIES 419
EI + PWRR TM + VKE G+DFNE+ +D + +AKE L L +
Sbjct: 311 EIDFKPPWRRITMVDAVKEYAGVDFNEIKSDEEAQAIAKEKHLE-FAKPL---------N 360
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ + G +LN ++E E ++QPTF++DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 361 TVTKGEVLNALYEEFGEANMIQPTFIMDYPVEISPLTKKKRGNPEFTERFEGFVFGRELC 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NA+SEL DP+ QR R E+Q ++ + DD +Y LD+ F++A
Sbjct: 421 NAYSELNDPIVQRQRFEQQAKER------------------ELGDDEAY--MLDEQFMSA 460
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LE GMPP GMG+GIDRL+M LT+SASIRDVI FP ++ Q+
Sbjct: 461 LETGMPPTGGMGMGIDRLIMFLTDSASIRDVILFPTMRPQK 501
>gi|421190505|ref|ZP_15647806.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB422]
gi|421192444|ref|ZP_15649710.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB548]
gi|399969561|gb|EJO03895.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB548]
gi|399969940|gb|EJO04254.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB422]
Length = 496
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/527 (44%), Positives = 347/527 (65%), Gaps = 36/527 (6%)
Query: 54 TSTSDREAVRALRIK--KVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
T D E LR++ K++ L+ G++P+ ++++R A + + + EE ++
Sbjct: 2 TEKIDTELNDQLRVRRQKLQALKDDLGIDPFGHRFERDSYAKDIHSFADNKSK-EELDAA 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
HV +AGR++A+R GK+ F +RD SGT+Q+Y ++ L +D + ++ D+GDILG
Sbjct: 61 KKHVIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDL-ADNYALIRR-ADLGDILGF 118
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG++ +T+ GE ++L++ L+K+L PLPDKYHGLTD+D RYR+RY+D+IS P+ +VF
Sbjct: 119 SGTVMKTDAGETTILIDKLTWLSKALRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVF 178
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR+KIV IR ++S+GF+EVETP+LQ +AGGA ARPFVT+HN+L D+YLRIATEL+L
Sbjct: 179 IKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMYLRIATELYL 238
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG E++YEIGRIFRNEG+ TRHNPEFTT+E Y AY D +M TE I+ A +
Sbjct: 239 KRLIVGGMERVYEIGRIFRNEGMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKS 298
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
+N IDYQG +I L + + + +M L+KE TGIDF D K+ ET + L
Sbjct: 299 INEDGVIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF-----DKKIDLETAQK-----LA 348
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
N++ ES VG+++ E F+ VE L++PTFV +P+E+SPLAK + +RFE
Sbjct: 349 NENNVKYESFWGVGHIIAEFFDTFVEKSLIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L+I G E NAF+EL DP+DQR R E Q +E+ + ++ +
Sbjct: 409 LYIAGGEYGNAFTELNDPIDQRQRFEAQ-----------AAERENGNDEAE--------- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+D++ ALE+GM P G+G+GIDRL MLLTN S+RDV+ FP ++
Sbjct: 449 SIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMR 495
>gi|423621403|ref|ZP_17597181.1| lysyl-tRNA synthetase [Bacillus cereus VD148]
gi|401263432|gb|EJR69557.1| lysyl-tRNA synthetase [Bacillus cereus VD148]
Length = 499
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 340/516 (65%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT+S L +Y L+ E E VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGELSKEELEEKEIT-VSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + +++ +L D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDTVGDEEY-ELFTTADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ +G DF N + V + L A +E KD VG
Sbjct: 313 NLEPEWTRLHMVDAIKQHSGADF---WNPMSVEEAREL-AKEHNVEIKDTM------EVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>gi|251780464|ref|ZP_04823384.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084779|gb|EES50669.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 501
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/519 (46%), Positives = 340/519 (65%), Gaps = 39/519 (7%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
ALR K+ +L+ G +P+ YK +RTH++ +++ Y L E +V+VAGR+++
Sbjct: 20 ALRRAKLADLQEAGKDPFDVYKVERTHTSEEVKSNYEEL--------EGKNVTVAGRIMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + + + + K + D+GD + +G + T+ GE+
Sbjct: 72 KRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTY-DLGDWVVATGEVFTTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV V++F ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV + F KR+KI+S IR+
Sbjct: 131 SVKVSNFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDNKGFLEVETPILSPIAGGAAAKPFITHHNTLDMDMYLRIATELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V + VNG + Y+G
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTVIELYEAYSDYNDMMEITENMVAYVCEKVNGTTKVMYEGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI PWRR TM ++VKE G+DFNE +K +E A LE ++ +
Sbjct: 311 EIDFTPPWRRITMVDVVKEYAGVDFNE----VKTNEEAQAIAKEKHLEFAKPL---NTIT 363
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G +LN ++E E ++QPTFV DYP+E+SPL K R + LTERFE F+ GRE+ NA+
Sbjct: 364 KGEVLNSLYEEFGEANMIQPTFVTDYPVEVSPLTKKKRGNPELTERFEGFVFGREICNAY 423
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALE 541
SEL DP+ QR R E+ QEK +E DD +Y +D+ F++ALE
Sbjct: 424 SELNDPIVQRQRFEQ-------------------QEKDRELGDDEAY--MMDEQFMSALE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRL+M LT+S SIRDV+ FP ++ Q+
Sbjct: 463 TGMPPTGGLGIGIDRLIMFLTDSTSIRDVLLFPTMRPQK 501
>gi|365873513|ref|ZP_09413046.1| lysyl-tRNA synthetase (class II) [Thermanaerovibrio velox DSM
12556]
gi|363983600|gb|EHM09807.1| lysyl-tRNA synthetase (class II) [Thermanaerovibrio velox DSM
12556]
Length = 506
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/516 (48%), Positives = 341/516 (66%), Gaps = 39/516 (7%)
Query: 66 RIKKVEELRSK-GLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
R +K+ LR + G +P+A K+DR HS ++ Y L+ EE + E +S+AGRV+
Sbjct: 23 RKEKLFRLRQEEGYDPFAIDKFDRRHSVAWVRGKYESLSQDEEGDEE---LSLAGRVMTL 79
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F T+ +D+G IQLY + + + D + K +VD GDILGV G+ RT++GELS
Sbjct: 80 RRHGKASFATMEEDTGRIQLYFQLDNMGEDAYGFFKKWVDTGDILGVKGTPFRTQRGELS 139
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V F +L+K+L PLP+K+HGL D + RYRQRY+D++ PEV + FR+R +I+ +R+
Sbjct: 140 IKVREFKLLSKALRPLPEKWHGLKDQEVRYRQRYLDLMVNPEVRETFRRRTRIIQTVRRV 199
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S G +EV TP+L AGGA ARPFVT+HN+LG +YLRIATEL+LKR+++G F+++YE
Sbjct: 200 LDSHGTLEVTTPILSTLAGGANARPFVTFHNALGIPMYLRIATELYLKRLVVGMFDRVYE 259
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IG FRNEG+ +HNPEFT +E+Y AY++ + MMN+ EEI+ CA + G YQG E
Sbjct: 260 IGPNFRNEGIDLKHNPEFTAMEVYWAYANNEDMMNLCEEILVACADEM-GSRVFTYQGRE 318
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDGLENKDKFVIESSP 421
I E P+RR TM +LVKE TGIDF+ + ++ ++A E + G E +
Sbjct: 319 ISFEPPFRRATMMDLVKEHTGIDFSTISDEEARRIALERHVVDELKGYETR--------- 369
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+LL E F+ VE KL+QPTFV+ +P ISPLAK + + +T+RFELF+ G E+ANA
Sbjct: 370 --YHLLPEFFDAYVEDKLIQPTFVIGHPTVISPLAKRNAENPDITDRFELFVNGSELANA 427
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DPLDQR R EQV+Q KE+ D V D+DFV ALE
Sbjct: 428 FSELNDPLDQRERFLEQVKQ-------------------KEAGDEEAHV-FDEDFVNALE 467
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP GMG+GIDRLVMLLT+S SIRDVI FP +K
Sbjct: 468 YGLPPTGGMGIGIDRLVMLLTDSKSIRDVILFPTMK 503
>gi|116490302|ref|YP_809846.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
gi|419858234|ref|ZP_14380912.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421187454|ref|ZP_15644813.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB419]
gi|421193260|ref|ZP_15650509.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB553]
gi|116091027|gb|ABJ56181.1| Lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
gi|399968662|gb|EJO03094.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB419]
gi|399972464|gb|EJO06664.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB553]
gi|410499158|gb|EKP90595.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 496
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/527 (44%), Positives = 347/527 (65%), Gaps = 36/527 (6%)
Query: 54 TSTSDREAVRALRIK--KVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
T D E LR++ K++ L+ G++P+ ++++R A + + + EE ++
Sbjct: 2 TEKIDTELNDQLRVRRQKLQALKDDLGIDPFGHRFERDSYAKDIHSFADNKSK-EELDAA 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
HV +AGR++A+R GK+ F +RD SGT+Q+Y ++ L +D + ++ D+GDILG
Sbjct: 61 KKHVIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDL-ADNYALIRR-ADLGDILGF 118
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG++ +T+ GE ++L++ L+K+L PLPDKYHGLTD+D RYR+RY+D+IS P+ +VF
Sbjct: 119 SGTVMKTDAGETTILIDKLTWLSKALRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVF 178
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR+KIV IR ++S+GF+EVETP+LQ +AGGA ARPFVT+HN+L D+YLRIATEL+L
Sbjct: 179 IKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMYLRIATELYL 238
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG E++YEIGRIFRNEG+ TRHNPEFTT+E Y AY D +M TE I+ A +
Sbjct: 239 KRLIVGGMERVYEIGRIFRNEGMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKS 298
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
+N IDYQG +I L + + + +M L+KE TGIDF D K+ ET + L
Sbjct: 299 INEDGVIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF-----DKKIDLETARK-----LA 348
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
N++ ES VG+++ E F+ VE L++PTFV +P+E+SPLAK + +RFE
Sbjct: 349 NENNVKYESFWGVGHIIAEFFDTFVEKSLIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L+I G E NAF+EL DP+DQR R E Q +E+ + ++ +
Sbjct: 409 LYIAGGEYGNAFTELNDPIDQRQRFEAQ-----------AAERENGNDEAE--------- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+D++ ALE+GM P G+G+GIDRL MLLTN S+RDV+ FP ++
Sbjct: 449 SIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMR 495
>gi|403386082|ref|ZP_10928139.1| lysyl-tRNA synthetase [Kurthia sp. JC30]
Length = 493
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/516 (45%), Positives = 341/516 (66%), Gaps = 34/516 (6%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVV 121
+ +R K++E+RS+G++P+ ++++RTH + L+E Y +E EN V +AGR++
Sbjct: 9 QQVRRDKMDEIRSQGIDPFGHRFERTHLTSDLREQYAETT--QEQFEENPVEVVLAGRIM 66
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
+R GK+ F ++D G IQ+Y K+ + + ++ +K D+GDI+GV G++ +T GE
Sbjct: 67 TKRRKGKVTFANIKDFGGQIQIYVRKDAIGEEPYEIVKK-ADLGDIIGVKGNLFKTHVGE 125
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L++ V F L+K L PLP+K+HGL DV++RYRQRY+D+I+ + F R +I+S IR
Sbjct: 126 LTIKVTEFTFLSKGLRPLPEKFHGLQDVEQRYRQRYLDLITSDDSMKTFVTRTQIISAIR 185
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ GF+EVETP+L AGGA ARPFVT+HN+L +Y+RIA EL+LKR+++GG EK+
Sbjct: 186 SFLNEKGFLEVETPMLNAVAGGAAARPFVTHHNALDAQMYMRIAIELYLKRLIVGGMEKV 245
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR+FRNEG+STRHNPEFT +E+YEAY+DY+ +M++TE++ H A V G + Y
Sbjct: 246 YEIGRVFRNEGVSTRHNPEFTLLELYEAYADYKDIMDLTEDLFVHVAQEVLGTTQVQYGE 305
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
I L + W+R M + VKEATG+DF KE T + L + I+ +
Sbjct: 306 DIIDLSKGWKRLHMVDAVKEATGVDF---------FKEMT-KEEAQALAKEHHVEIKDTM 355
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE VE LVQPTFV +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 356 EVGHIINEFFEQKVEETLVQPTFVYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANA 415
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E Q+ + ++ +D ++E +D+DF+ ALE
Sbjct: 416 FTELNDPIDQRERFEAQMVEK------------------EQGNDEAHE--MDEDFLEALE 455
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDR++MLLTN+ SIRDV+ FP+++
Sbjct: 456 YGMPPTGGLGIGIDRMIMLLTNAQSIRDVLLFPLMR 491
>gi|289450735|ref|YP_003475258.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185282|gb|ADC91707.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 660
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/530 (43%), Positives = 343/530 (64%), Gaps = 40/530 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEES 107
A + S T + +R K+ +LR+ G +P+ +++RTHS +EI R AN
Sbjct: 3 AINESNKTISQNEQMQIRCDKLSQLRAAGKDPFEQVRFERTHSC---EEICRDFAN---- 55
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
E V +AGR++++R GK++F L D G IQ++ + + L + + + + +DIGD
Sbjct: 56 -LEGKRVKIAGRIMSKRGMGKVSFCDLNDKFGHIQIFTKIDLLGEEAYKEWQK-LDIGDW 113
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + RT++GE+S+ +V+L+KS+ PLP+K+HGL D+D RYR+RY+D+I PEV
Sbjct: 114 VGIDGEVMRTQRGEISIRNYGYVLLSKSIRPLPEKFHGLQDMDTRYRRRYLDLIVNPEVR 173
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
F KR+ I+ +R ++++ F+EVETP+L GGA ARPF+T+HN++ DLYLRIA E
Sbjct: 174 QTFAKRSIIIRTLRNYLDNIDFLEVETPILNVIPGGAAARPFITHHNAMNIDLYLRIAPE 233
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L+LKR+++GG +++YEIGR FRNEG+ T+HNPEFT +E+Y+A++DY+ MM +TE ++ C
Sbjct: 234 LYLKRLIVGGMDRVYEIGRQFRNEGMDTKHNPEFTLLELYQAFTDYKGMMELTETLIYEC 293
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A+A GK T+ ++GV++ L+ P+RR TM + V + +G+DF+++ DL A
Sbjct: 294 AMAACGKTTVTWRGVDVDLKPPFRRLTMRDAVLQYSGVDFDQI-KDLPAAV--------- 343
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
+ + +E G++ N FE VE KLVQPTF+ DYPIEISPL K LTE
Sbjct: 344 AVATEHNLPVEPGMGRGDIFNLFFETYVEDKLVQPTFIYDYPIEISPLTKKKPGRPELTE 403
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFELFICG E ANA+SEL DP+DQR R + Q+R KR E +
Sbjct: 404 RFELFICGAEFANAYSELNDPIDQRERFKAQLR----KRELGDEEANR------------ 447
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+D+ ALEYG+PP GMG+GIDRL MLLT+S SIRDV+ FP +K
Sbjct: 448 ----MDEDYCMALEYGLPPTGGMGMGIDRLTMLLTDSESIRDVLLFPTMK 493
>gi|257421557|ref|ZP_05598547.1| lysyl-tRNA synthetase, partial [Enterococcus faecalis X98]
gi|257163381|gb|EEU93341.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
Length = 485
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/500 (46%), Positives = 331/500 (66%), Gaps = 32/500 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQIMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNS 564
PP G+G+GIDRLVMLLT++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDA 485
>gi|456012089|gb|EMF45806.1| Lysyl-tRNA synthetase [Planococcus halocryophilus Or1]
Length = 494
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 340/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R G++P+ +++RTH + ++ E Y L+ EE + V +AGRV+ +R
Sbjct: 11 VRRQKMQNFRDNGMDPFGGRFERTHLSQEIIEKYGELSK-EELEEASHEVVIAGRVMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ ++ D+ + VD+GDILG+ G + +T GELS+
Sbjct: 70 GKGKAGFAHIQDLKGQIQIYVRKD-VIGDEAYEFYNTVDLGDILGIKGIVFKTNVGELSI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
LTK+L PLP+K+HGL DV++RYRQRY+D+++ E + F R++I+ +R+ +
Sbjct: 129 KAKEVEFLTKALRPLPEKFHGLKDVEQRYRQRYLDLLTSEESKETFILRSRIIQSMRRYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 DNAGFLEVETPMLHSIAGGATAKPFITHHNALDMELYIRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+DY +M +TE +V H A V G T+ Y +I
Sbjct: 249 GRVFRNEGISTRHNPEFTMLELYEAYADYNDIMALTENLVAHIAQEVLGTTTVQYGEDQI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + VKE TG+DF E +AKE L + I+ + VG
Sbjct: 309 DLAIGWKRLHMADAVKEYTGVDFWE-----HMAKEE-----AQALAKEHGIDIKPTMEVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE +LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 359 HILNEFFEQKVEEQLVQPTFIYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E A + EK+ E +D ++E +D+DF+ ALEYG+
Sbjct: 419 LNDPIDQRQRFE-----------AQLVEKA-------EGNDEAHE--MDEDFIEALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS+SIRDV+ FP ++
Sbjct: 459 PPTGGLGIGIDRLIMLLTNSSSIRDVLLFPQMR 491
>gi|227498560|ref|ZP_03928704.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
gi|352684258|ref|YP_004896243.1| lysyl-tRNA synthetase class II [Acidaminococcus intestini RyC-MR95]
gi|226904016|gb|EEH89934.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
gi|350278913|gb|AEQ22103.1| lysyl-tRNA synthetase class II [Acidaminococcus intestini RyC-MR95]
Length = 657
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/533 (46%), Positives = 339/533 (63%), Gaps = 38/533 (7%)
Query: 45 RNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANG 104
+N+ A + + E V A+R+ K+ +L KG+ P+ + + TH ++ + + L
Sbjct: 6 KNQPAVDTGAAEEVSEQV-AVRMDKMHKLEEKGILPFGHAYKVTHHNKEVHDKVKEL--- 61
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
EE +E V VAGR+ A R GK AF+ L D SG IQLY K+ L D + +K+ +DI
Sbjct: 62 EEKGAE---VRVAGRLTAIRGHGKTAFMDLLDKSGKIQLYVRKDELGEDNYSVVKL-LDI 117
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+GV G + T GE S+ V L+K+L PLP+K+HGL D + RYRQRYVD+I P
Sbjct: 118 GDIVGVEGEVFTTHMGEPSIRVKKLEFLSKALKPLPEKWHGLKDKEIRYRQRYVDLIVNP 177
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV D F KR +I+ IR +++ G++EVETPVL +GGA ARPFVT+HN+L DLYLRI
Sbjct: 178 EVRDTFVKRTEIIKSIRNILDNEGYLEVETPVLNTISGGATARPFVTHHNALDIDLYLRI 237
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
ATEL+LKR+++GG E++YEIGRIFRNEG+ +HNPEFT+IE+YEAY DYQ+MM+ITE++V
Sbjct: 238 ATELNLKRLIVGGLERVYEIGRIFRNEGMDIKHNPEFTSIELYEAYGDYQTMMDITEKLV 297
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRA 404
+ A V G + I YQG EI L PW R TM VK+ +G DF + D++ A++ A
Sbjct: 298 SETAQRVLGTMKITYQGKEIDLTPPWPRMTMVEAVKKFSGYDFTGV-RDVETARKLAADA 356
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
I+ + G +L F+ VE L+QPTF++ +P EISPLAK
Sbjct: 357 ---------NVEIQPTFGPGKILEAFFDEFVEKNLIQPTFIMGHPKEISPLAKSSLADPE 407
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
+T+RFE FI G E+ N F+EL DP+DQ+ R E+QV + N D
Sbjct: 408 VTDRFEGFINGSEICNGFTELNDPIDQKERFEKQVEERN------------------NGD 449
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D + +D+DF+ AL +G+PP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 450 DEAG--MMDEDFINALMHGLPPTGGLGIGIDRLVMLLTNSASIRDVLLFPTMK 500
>gi|188587577|ref|YP_001919618.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
gi|188497858|gb|ACD50994.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
Length = 501
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/519 (46%), Positives = 340/519 (65%), Gaps = 39/519 (7%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
ALR K+ +L+ G +P+ YK +RTH++ +++ Y L E +V+VAGR+++
Sbjct: 20 ALRRAKLADLQEAGKDPFDVYKVERTHTSEEVKSNYEEL--------EGKNVTVAGRIMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F + D G IQL+ + + + + K + D+GD + +G + T+ GE+
Sbjct: 72 KRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTY-DLGDWVVATGEVFTTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ V++F ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV + F KR+KI+S IR+
Sbjct: 131 SIKVSNFELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++ GFEK+Y
Sbjct: 191 FLDNRGFLEVETPILSPIAGGAAAKPFITHHNTLDMDMYLRIATELYLKRLIVAGFEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR FRNEG+S RHNPEFT IE+YEAYSDY MM ITE +V + VNG + Y+G
Sbjct: 251 EIGRNFRNEGMSVRHNPEFTVIELYEAYSDYNDMMEITENMVAYVCEKVNGTTKVMYEGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI PWRR TM ++VKE G+DFNE +K +E A LE ++ +
Sbjct: 311 EIDFTPPWRRITMVDVVKEYAGVDFNE----VKTNEEAQAIAKEKHLEFAKPL---NTIT 363
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G +LN ++E E ++QPTFV DYP+E+SPL K R + LTERFE F+ GRE+ NA+
Sbjct: 364 KGEVLNSLYEEFGEANMIQPTFVTDYPVEVSPLTKKKRGNPELTERFEGFVFGREICNAY 423
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALE 541
SEL DP+ QR R E+ QEK +E DD +Y +D+ F++ALE
Sbjct: 424 SELNDPIVQRQRFEQ-------------------QEKDRELGDDEAY--MMDEQFMSALE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRL+M LT+S SIRDV+ FP ++ Q+
Sbjct: 463 TGMPPTGGLGIGIDRLIMFLTDSTSIRDVLLFPTMRPQK 501
>gi|329117573|ref|ZP_08246290.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
gi|326907978|gb|EGE54892.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
Length = 500
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/517 (47%), Positives = 339/517 (65%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + N+ VAGR++ +R
Sbjct: 19 VRREKMTALAEQGIDPFGKRFERTANSAQLKEKYADKSK-EELHDLNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDAVGEENYDIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ + F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGMDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DYQ +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMNLTEGIIQHAANAVKGDGPIDYQGNEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+ +P++R M + +KE TGIDF + + L +AKE + LE +
Sbjct: 317 LINQPFKRVHMVDAIKEVTGIDFWPEMSIEDALALAKEKHVP-----LE-------KHFT 364
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANA
Sbjct: 365 SVGHIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANA 424
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
F+EL DP+DQ +R E AQ + KE DD + +D DFV AL
Sbjct: 425 FTELNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEAL 463
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 464 EYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|290889690|ref|ZP_06552779.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
gi|419759308|ref|ZP_14285613.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB304]
gi|419857135|ref|ZP_14379845.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB202]
gi|421183796|ref|ZP_15641225.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB318]
gi|421195659|ref|ZP_15652863.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB568]
gi|421196407|ref|ZP_15653596.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB576]
gi|290480687|gb|EFD89322.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
gi|399904003|gb|EJN91466.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB304]
gi|399968433|gb|EJO02866.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB318]
gi|399975300|gb|EJO09357.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB568]
gi|399977607|gb|EJO11587.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB576]
gi|410498200|gb|EKP89656.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni AWRIB202]
Length = 496
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/527 (44%), Positives = 347/527 (65%), Gaps = 36/527 (6%)
Query: 54 TSTSDREAVRALRIK--KVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
T D E LR++ K++ L+ G++P+ ++++R A + + + EE ++
Sbjct: 2 TEKIDTELNDQLRVRRQKLQALKDDLGIDPFGHRFERDSYAKDIHSFADNKSK-EELDAA 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
HV +AGR++A+R GK+ F +RD SGT+Q+Y ++ L +D + ++ D+GDILG
Sbjct: 61 KKHVIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDL-ADNYALIRR-ADLGDILGF 118
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG++ +T+ GE ++L++ L+K+L PLPDKYHGLTD+D RYR+RY+D+IS P+ +VF
Sbjct: 119 SGTVMKTDAGETTILIDKLTWLSKALRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVF 178
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR+KIV IR ++S+GF+EVETP+LQ +AGGA ARPFVT+HN+L D+YLRIATEL+L
Sbjct: 179 IKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMYLRIATELYL 238
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG E++YEIGRIFRNEG+ TRHNPEFTT+E Y AY D +M TE I+ A +
Sbjct: 239 KRLIVGGMERVYEIGRIFRNEGMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKS 298
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
+N IDYQG +I L + + + +M L+KE TGIDF D K+ ET + L
Sbjct: 299 INEDGFIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF-----DKKIDLETARK-----LA 348
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
N++ ES VG+++ E F+ VE L++PTFV +P+E+SPLAK + +RFE
Sbjct: 349 NENNVKYESFWGVGHIIAEFFDTFVEKSLIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L+I G E NAF+EL DP+DQR R E Q +E+ + ++ +
Sbjct: 409 LYIAGGEYGNAFTELNDPIDQRQRFEAQ-----------AAERENGNDEAE--------- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+D++ ALE+GM P G+G+GIDRL MLLTN S+RDV+ FP ++
Sbjct: 449 SIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMR 495
>gi|217077587|ref|YP_002335305.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
gi|419760139|ref|ZP_14286422.1| lysyl-tRNA synthetase [Thermosipho africanus H17ap60334]
gi|226736755|sp|B7ID87.1|SYK_THEAB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|217037442|gb|ACJ75964.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
gi|407514821|gb|EKF49621.1| lysyl-tRNA synthetase [Thermosipho africanus H17ap60334]
Length = 502
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/517 (46%), Positives = 343/517 (66%), Gaps = 39/517 (7%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
R RI +++++ +KG+ PY YK+++THS+ ++ + +L GE E+ VS AGR+++
Sbjct: 6 REQRINEIKQISAKGVNPYPYKFEKTHSSQDIKAQFENLNPGE--VKEDASVSTAGRIMS 63
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
R GK AF ++D G IQ Y ++ + D ++ K + IGDI+GV GS+ +++ GE+
Sbjct: 64 LRHHGKSAFFHIKDFFGRIQAYIRQDIVGKDVYEFFKEHIAIGDIVGVKGSVFKSKTGEV 123
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++LV +L K L P+P+K+HG+ D + YRQRYVDMI+ E + FR R +I+ IR+
Sbjct: 124 TILVKEIELLNKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDETLNRFRIRFEIIKLIRE 183
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+ S GF+EVETP+L+ GGA ARPF+T+ N D+Y+RIATEL+LKR ++GGFEK+Y
Sbjct: 184 FLNSKGFIEVETPILEYVTGGASARPFITHLNVFDIDMYMRIATELYLKRFIVGGFEKVY 243
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
E+G+ FRNEGLS +H+PEFT+IE+Y+AY+DY+ MMN+TEE+ + G + YQ +
Sbjct: 244 ELGKNFRNEGLSYKHHPEFTSIEIYQAYADYEDMMNLTEELFVFIVEKLFGTTKVKYQDI 303
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDGLENKDKFVIESS 420
EI RPWRR M + +KE G+D E + L+V K+ + +E KDK
Sbjct: 304 EIDFSRPWRRVKMRDFIKEHLGVDILEDTEEKMLEVLKQHDVE-----VEIKDK------ 352
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+L+ +++++ VE K+VQPTF+L++P+EISPLAK HR +TERFEL I GREMAN
Sbjct: 353 ---GHLIEKLWDL-VEDKVVQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMAN 408
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ R Q KL+E+ D ++ +D DFV AL
Sbjct: 409 AFSELNDPVDQYERFLRQA-------------------KLREAGDEEAQM-MDKDFVRAL 448
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLTNS +IRDVIAFP+++
Sbjct: 449 EYGMPPTGGLGIGIDRLVMLLTNSPTIRDVIAFPLVR 485
>gi|383754534|ref|YP_005433437.1| putative lysyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366586|dbj|BAL83414.1| putative lysyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 504
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/530 (45%), Positives = 344/530 (64%), Gaps = 39/530 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS 109
+ D + +R K+E + G+ P+ +++D T A +++ Y HL E +
Sbjct: 6 QNQQAPVEDLNEMMKVRRDKMEAFKEMGVAPFGHRFDVTAYAADIKKEYDHL----EGDE 61
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILG 169
E V +AGR++A R GK +F TL D +G IQ+Y + + L +++ +DIGDI+G
Sbjct: 62 EGPEVFIAGRLMAIRGHGKASFCTLNDRTGNIQVYFKIDVLGEEKYKGQFRRLDIGDIIG 121
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
+ G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D+I +V +
Sbjct: 122 IRGVVFKTHRGEVTVRVEDFDLLSKSLRPLPEKFHGLQDVDIRYRQRYLDLIVNQDVRET 181
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
FR+R K ++ IR+ ++ G++EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL+
Sbjct: 182 FRRRTKTINSIREYLDERGYLEVETPVLSTIAGGAAARPFITHHNTLDIDLYLRIATELN 241
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GG +++YEIGRIFRNEG+ RHNPEFT+IE Y+A++DY MM++TE IV + A
Sbjct: 242 LKRLIVGGLDRVYEIGRIFRNEGMDVRHNPEFTSIEFYQAFADYTDMMDLTEGIVVNAAQ 301
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETT--LRALGD 407
V G I+YQGVEI L + +R +M++ VKEATG DF +A ET R L D
Sbjct: 302 KVLGTSVINYQGVEIDLSK-VKRISMNDAVKEATGKDF--------MACETVEEARKLAD 352
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
+ E +G +LN+ FE VE L+QPTF+ +P EISPLAK + +T+
Sbjct: 353 EI----GVPYEERHGIGGILNQAFEEKVEETLMQPTFITGHPTEISPLAKRNAEDPRITD 408
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE FI GRE+AN F+EL DP+DQ+ R E+Q++Q + DD +
Sbjct: 409 RFEFFIYGRELANGFTELNDPIDQKGRFEDQLKQR------------------EAGDDEA 450
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +D+DFV ALEYG+PP G+G+GIDRLVM LT++ASIRDV+ FP +K
Sbjct: 451 H--GMDEDFVMALEYGLPPTGGVGIGIDRLVMFLTDAASIRDVLLFPTMK 498
>gi|118587147|ref|ZP_01544576.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
gi|118432426|gb|EAV39163.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
Length = 496
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/527 (44%), Positives = 346/527 (65%), Gaps = 36/527 (6%)
Query: 54 TSTSDREAVRALRIK--KVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
T D E LR++ K++ L+ G++P+ ++++R A + + + EE ++
Sbjct: 2 TEKIDTELNDQLRVRRQKLQALKDDLGIDPFGHRFERDSYAKDIHSFADNKSK-EELDAA 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
HV +AGR++ +R GK+ F +RD SGT+Q+Y ++ L +D + ++ D+GDILG
Sbjct: 61 KKHVIIAGRIMTKRGAGKIIFADIRDVSGTVQIYARRDDL-ADNYALIRR-ADLGDILGF 118
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG++ +T+ GE ++L++ L+K+L PLPDKYHGLTD+D RYR+RY+D+IS P+ +VF
Sbjct: 119 SGTVMKTDAGETTILIDKLTWLSKALRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVF 178
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR+KIV IR ++S+GF+EVETP+LQ +AGGA ARPFVT+HN+L D+YLRIATEL+L
Sbjct: 179 IKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMYLRIATELYL 238
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG E++YEIGRIFRNEG+ TRHNPEFTT+E Y AY D +M TE I+ A +
Sbjct: 239 KRLIVGGMERVYEIGRIFRNEGMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKS 298
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
+N IDYQG +I L + + + +M L+KE TGIDF D K+ ET + L
Sbjct: 299 INEDGVIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF-----DKKIDLETAQK-----LA 348
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
N++ ES VG+++ E F+ VE L++PTFV +P+E+SPLAK + +RFE
Sbjct: 349 NENNVKYESFWGVGHIIAEFFDTFVEKSLIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L+I G E NAF+EL DP+DQR R E Q +E+ + ++ +
Sbjct: 409 LYIAGGEYGNAFTELNDPIDQRQRFEAQ-----------AAERENGNDEAE--------- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+D++ ALE+GM P G+G+GIDRL MLLTN S+RDV+ FP ++
Sbjct: 449 SIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMR 495
>gi|323491012|ref|ZP_08096206.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
gi|323395368|gb|EGA88220.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
Length = 494
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 339/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R G++P+ +++RTH + ++ E Y + EE + V +AGRV+ +R
Sbjct: 11 VRRQKMQNFRDNGMDPFGGRFERTHLSQEIIEQYGEFSK-EELEEASHEVVIAGRVMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ + D+ + VD+GDILG+ G++ +T GELS+
Sbjct: 70 GKGKAGFAHIQDLKGQIQIYVRKD-AIGDEAYEFYNTVDLGDILGIKGTVFKTNVGELSI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
LTK+L PLP+K+HGL DV++RYRQRY+D+++ E + F R++I+ +R+ +
Sbjct: 129 KAKEVEFLTKALRPLPEKFHGLKDVEQRYRQRYLDLLTSEESKETFILRSRIIQSMRRYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 DNEGFLEVETPMLHSIAGGAAAKPFITHHNALDMELYIRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+DY +M +TE +V H A V G T+ Y +I
Sbjct: 249 GRVFRNEGISTRHNPEFTMLELYEAYADYNDIMALTENLVAHIAQEVLGTTTVQYGEDQI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + VKE TG+DF + + KE L + I+S+ VG
Sbjct: 309 DLAVGWKRLHMADAVKEYTGVDFWK-----HITKEE-----AQALAKEHGIEIKSTMEVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE +LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 359 HILNEFFEQKVEEQLVQPTFIYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E A + EK+ E +D ++E +D+DF+ ALEYG+
Sbjct: 419 LNDPIDQRQRFE-----------AQLVEKA-------EGNDEAHE--MDEDFIEALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS+SIRDV+ FP ++
Sbjct: 459 PPTGGLGIGIDRLIMLLTNSSSIRDVLLFPQMR 491
>gi|323141547|ref|ZP_08076432.1| lysine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413959|gb|EFY04793.1| lysine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
Length = 656
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 338/513 (65%), Gaps = 37/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+RI K+ ++ G +P+ Y++ TH A + + L+ E V +AGR++A R
Sbjct: 27 VRIDKMHKIEEHGWKPFGYRFLYTHRAADIAAQFDELSEKE------TEVKMAGRIMAIR 80
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F+ ++D +G IQ+Y K+ + + + +K+ +DIGD +G++G+ RT GELS+
Sbjct: 81 GHGKTCFMDMQDKTGRIQVYVRKDVIGEENYALIKL-MDIGDTVGITGTAFRTHMGELSI 139
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
NS +L+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV D F KR++I+ +R+ +
Sbjct: 140 KANSVEMLSKSLRPLPEKWHGLKDVETRYRQRYVDLIVNPEVRDTFVKRSQIIRSVREVL 199
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S F+EVETP+L AGGA ARPF++YHN+L +Y+RIA EL+LKR+++GG +++YE+
Sbjct: 200 DSHDFLEVETPILNTIAGGAAARPFISYHNALDMQVYMRIAPELYLKRLIVGGMDRVYEM 259
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ RHNPEFT++E+Y+A++DY+ MM++TEE+V A V G TI+Y+G I
Sbjct: 260 GRVFRNEGIDNRHNPEFTSVEIYQAFADYRDMMDLTEEVVVKTAEKVLGTTTINYEGTTI 319
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW+R +M VKE +G DF + DL+ A RA+ L +E S +G
Sbjct: 320 ELASPWKRMSMIEAVKEYSGKDFTNV-TDLEEA-----RAIAKEL----NVAVEPSFGIG 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++N FE VE KL+QPTF+ +P EISPLAK + + +T+RFE +I GRE+ N F+E
Sbjct: 370 KIINACFEEYVEDKLIQPTFITGHPKEISPLAKSNPENPEITDRFEAYIYGREICNGFTE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +QV E+RA E + +D+DFV ALEYG+
Sbjct: 430 LNDPIDQKERFLKQV----EERANGDEEAN----------------MMDEDFVNALEYGL 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVM LTNS++IRDV+ FP +K
Sbjct: 470 PPTGGLGIGIDRLVMFLTNSSTIRDVLFFPTMK 502
>gi|331268358|ref|YP_004394850.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124908|gb|AEB74853.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 510
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 339/513 (66%), Gaps = 37/513 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R++K+ L+ +G +P+ YK +RTH++ Q+++ Y L E +V+VAGR++++R
Sbjct: 31 RMQKLSNLQEQGKDPFDVYKVERTHTSQQIKDNYDEL--------EGKNVTVAGRLMSKR 82
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F +RD G IQLY + + + ++ + K F DIGD + ++G++ +T+ GE+++
Sbjct: 83 VHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTF-DIGDFVSITGTVFKTKTGEVTL 141
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +LTKSL PLP+K+HGL D D RYRQRYVD+I +V + F KR I+ IR+ +
Sbjct: 142 HILDFKLLTKSLKPLPEKFHGLKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFL 201
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ F+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 202 DNREFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 261
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + VNG + Y+G EI
Sbjct: 262 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEI 321
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PWRR TM + VKE G+DFNE+ D + R + G E + K ++ + G
Sbjct: 322 DFKPPWRRITMVDAVKEFAGVDFNEVNTDEEA------REIAKGKELELKKELKDC-TKG 374
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++L +FE E KL+QPTFV DYP E SPL K R + LTERFE F+ GRE+ NA+SE
Sbjct: 375 DILVALFEEFGEEKLMQPTFVCDYPKENSPLTKKKRGNDALTERFEGFVYGREICNAYSE 434
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ Q+ R +Q+++ + DD +Y +DDDF+ ALE GM
Sbjct: 435 LNDPIVQKERFVQQLKER------------------ELGDDEAY--MMDDDFINALEIGM 474
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+M LT+S+SIRDVI FP +K
Sbjct: 475 PPTGGLGIGIDRLIMFLTDSSSIRDVILFPTMK 507
>gi|340357188|ref|ZP_08679813.1| lysine--tRNA ligase [Sporosarcina newyorkensis 2681]
gi|339618597|gb|EGQ23193.1| lysine--tRNA ligase [Sporosarcina newyorkensis 2681]
Length = 496
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 336/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ++R GL+P+ +++RTH N+++ Y L+ EE V++AGR++ +R
Sbjct: 13 VRRQKMNDIREGGLDPFGQRFERTHLTNEIRSAYEELSK-EELEETEHEVTIAGRIMTKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y ++ + D + +L D+GDI+GV G + +T+ GELS+
Sbjct: 72 GKGKAGFAHIQDLGGQIQIYVRQDAIGEDAY-KLFTLADLGDIVGVQGVIFKTKVGELSI 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F LTKSL PLP+K+HGL D+++RYRQRY+D+IS + F R++I+ +R +
Sbjct: 131 KATKFTFLTKSLRPLPEKFHGLQDIEQRYRQRYLDLISTEGSKETFIMRSRIIQSMRHYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP+L AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 191 DKQGFLEVETPMLHSIAGGAAARPFVTHHNTLDMTLYMRIAIELHLKRLIVGGLEKVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V G TI Y +I
Sbjct: 251 GRVFRNEGMSTRHNPEFTMIELYEAYADYNDIMELTENLVAHIAQEVLGTTTIQYGEDQI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + VKE TG+DF + ++ KE L + + SS G
Sbjct: 311 DLAPRWKRLHMADAVKEYTGVDFWQ-----QLTKEQAHE-----LAKEHNVQVTSSMEAG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE +LVQPTF+ +P+E+SPLAK + T+RFELFI RE ANAF+E
Sbjct: 361 HVLNEFFEQKVEEQLVQPTFIYGHPVEVSPLAKKNPEDPRYTDRFELFIVRREHANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQRAR E Q+ + ++ +D ++E +D+DF+ ALEYG+
Sbjct: 421 LNDPIDQRARFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYGL 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAQSIRDVLLFPQMR 493
>gi|118444238|ref|YP_877136.1| lysyl-tRNA synthetase [Clostridium novyi NT]
gi|259511525|sp|A0PXN4.1|SYK_CLONN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|118134694|gb|ABK61738.1| lysyl-tRNA synthetase [Clostridium novyi NT]
Length = 510
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 335/516 (64%), Gaps = 43/516 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R++K+E L+ +G +P+ YK +RTH++ Q+++ Y L E +V+VAGR++++R
Sbjct: 31 RMQKLENLQEQGKDPFDVYKVERTHTSQQVKDNYDEL--------EGKNVTVAGRLMSKR 82
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F +RD G IQLY + + ++ + K F DIGD + ++G++ +T+ GE+++
Sbjct: 83 VHGKAGFSDIRDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDFVSITGTVFKTKTGEITL 141
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +L+KSL PLP+K+HGL D D RYRQRYVD+I +V + F KR I+ IR+ +
Sbjct: 142 HILDFQLLSKSLKPLPEKFHGLKDPDLRYRQRYVDLIMNEDVKETFMKRTAIIKAIREFL 201
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ F+EVETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 202 DNRDFLEVETPILSPIAGGAAARPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 261
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + VNG + Y+G EI
Sbjct: 262 GKNFRNEGIDVRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEI 321
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ PWRR TM + VKE G+DFNE+ D ++AK L
Sbjct: 322 DFKPPWRRITMVDAVKEYAGVDFNEVKTDEEAREIAKSKELELK----------KELKDC 371
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTFV DYP E SPL K R + LTERFE F+ GRE+ NA
Sbjct: 372 TKGDILVALFEEFGEEKLMQPTFVCDYPKENSPLTKKKRGNDELTERFEGFVYGREICNA 431
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP+ Q+ R +Q+++ + DD +Y +DDDF+ ALE
Sbjct: 432 YSELNDPIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFINALE 471
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL+M LT+S+SIRDVI FP +K
Sbjct: 472 IGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFPTMK 507
>gi|386394544|ref|ZP_10079325.1| lysyl-tRNA synthetase (class II) [Desulfovibrio sp. U5L]
gi|385735422|gb|EIG55620.1| lysyl-tRNA synthetase (class II) [Desulfovibrio sp. U5L]
Length = 529
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/518 (47%), Positives = 336/518 (64%), Gaps = 44/518 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV------AGR 119
RI K +L G+ Y +++ + A G E E +V AGR
Sbjct: 43 RIAKAVQLLDDGVPLYPNDFEKGEDIGPV-------AAGHEPLDEEALAAVPTVFRLAGR 95
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
+V+ R+FGK+AF T++D SG IQ++ E+++L ++ + K F DIGDI+GVSG + RT+
Sbjct: 96 IVSLRSFGKVAFFTIQDASGRIQVFAERDKLGTEAYQTFKKF-DIGDIVGVSGRLFRTKT 154
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GEL++ ++ +LTKS+ PLP+K+HGL DV+ RYRQRYVD+I P+ ++F+ R IV E
Sbjct: 155 GELTLHADTVRLLTKSMRPLPEKFHGLKDVETRYRQRYVDLIVTPKAVEIFKARTTIVRE 214
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
+R +++ GF+EVETP++Q GGA A+PFVT+HN+L L+LRIA EL+LKR+L+GGFE
Sbjct: 215 LRAFLDTAGFMEVETPMMQAIPGGATAKPFVTHHNALDMGLFLRIAPELYLKRLLVGGFE 274
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR FRNEG+STRHNPEFT E Y A++ Y +M++TE + +H A AV G + Y
Sbjct: 275 KVYEVGRNFRNEGVSTRHNPEFTMCEFYWAFARYTDLMDLTERLFSHLARAVTGGDVVTY 334
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG EI L W R H+ +++ GI E+ D AK GL K +
Sbjct: 335 QGQEINLGLGWARVAFHDSLEKIGGIA-PEVYRDFDAAK---------GLVEKSGEKVLK 384
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+G + ++F+I VEPKL+QP F+ YP EISPL++ + +T+RFELFICGREMA
Sbjct: 385 GEKLGKVQAKLFDIFVEPKLLQPHFIYHYPTEISPLSRRNSEDPTITDRFELFICGREMA 444
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP+DQR R EEQVR EK A DD ++ +DDD+V A
Sbjct: 445 NAFSELNDPVDQRLRFEEQVR---EKEAG---------------DDEAHR--MDDDYVRA 484
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPPA+G G+GIDRLVMLLT+ ASIR+VI FP+L+
Sbjct: 485 LEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPLLR 522
>gi|374338429|ref|YP_005095143.1| lysyl-tRNA synthetase [Streptococcus macedonicus ACA-DC 198]
gi|372284543|emb|CCF02825.1| Lysyl-tRNA synthetase (class II) [Streptococcus macedonicus ACA-DC
198]
Length = 496
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/514 (45%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTK-EELHEINKTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 74 GKGKVGFAHIQDRDGQIQVYVRKDAVGDENYQIFKK-ADLGDFLGIEGEIMRTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ +YR+RY+D++S E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETKYRKRYLDLVSNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 EGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE+Y+AY+D++ +M++TE I+ H + AV G I YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF +E TL + K+ V + SVG
Sbjct: 313 AIDKPFKRVHMVDAIKEVTGVDF---------WQEMTLEEAQAIAKEKNVPVEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|126653301|ref|ZP_01725412.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
gi|126589975|gb|EAZ84104.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
Length = 500
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/516 (46%), Positives = 342/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN-DHVSVAGRVVAR 123
+R +K+ + G +P+ +++RTH + +++E + +E EN V +AGR++ +
Sbjct: 16 VRRQKMTTILENGQDPFGSRFERTHLSTEVKEQF--ADQTKEQLEENLQEVIIAGRIMTK 73
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y ++ + + ++ K D+GDI+G+ G++ RT+ GELS
Sbjct: 74 RGKGKAGFAHIQDLGGQIQIYVRQDHVGEEAYELFKQ-ADLGDIVGIRGNVFRTQVGELS 132
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F LTK+L P+P+K+HGL DV++RYRQRY+D+++ E F R+KI+ IR
Sbjct: 133 VKAEEFTFLTKALRPMPEKFHGLQDVEQRYRQRYLDLMTNEESKLTFIARSKIIRAIRNY 192
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++EVETP+L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 193 LDNSGYLEVETPMLHTIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYE 252
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DYQ +M++TE ++ H A V G T+ Y E
Sbjct: 253 IGRVFRNEGISTRHNPEFTMIELYEAYADYQDIMSLTENLIAHVAQEVLGTTTVQYGEDE 312
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSP 421
I L WRR M + VKEATG+DF + + KE +AL G+E KD
Sbjct: 313 INLAVGWRRVHMVDAVKEATGVDFWQ-----PMTKEQA-QALAKEHGVEVKD------VH 360
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE +E LVQPTFV +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 361 EVGHIINEFFEQKIEETLVQPTFVYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANA 420
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E A ++EK++ +D ++E +D+DF+ ALE
Sbjct: 421 FTELNDPIDQRQRFE-----------AQLAEKAAG-------NDEAHE--MDNDFIEALE 460
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 461 YGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMR 496
>gi|256618322|ref|ZP_05475168.1| lysyl-tRNA synthetase, partial [Enterococcus faecalis ATCC 4200]
gi|256597849|gb|EEU17025.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
Length = 484
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/499 (46%), Positives = 330/499 (66%), Gaps = 32/499 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQIMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEEAC-ALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTN 563
PP G+G+GIDRLVMLLT+
Sbjct: 466 PPTGGLGIGIDRLVMLLTD 484
>gi|431792159|ref|YP_007219064.1| lysyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782385|gb|AGA67668.1| lysyl-tRNA synthetase (class II) [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 488
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 337/514 (65%), Gaps = 41/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ +LR G+EPYA ++ RTH A ++ + + L E V +AGR++++R
Sbjct: 10 VRLDKLAQLREYGVEPYADQYQRTHMAQEILDGFEAL--------EGQEVKIAGRMMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D SG IQ Y K+ + ++ F+ + F DIGDI+GV G + RT +GE+S+
Sbjct: 62 DQGKVIFTHVQDFSGQIQAYIRKDDIGAEWFELVTKF-DIGDIVGVKGIVFRTRRGEISI 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +L+K++ PLP+K+HGLT+V+ RYRQRY+D+I PEV + F R+KI+ +R +
Sbjct: 121 HASEVQLLSKAMRPLPEKFHGLTNVELRYRQRYLDLIVNPEVRNTFVMRSKIIRSMRNFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GGF+K++EI
Sbjct: 181 EGQGFLEVETPTLHTIPGGAAARPFITHHNTLDMDLYLRIALELPLKRLIVGGFDKVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+AY++Y+ +M +TE +++ A V+G + YQ I
Sbjct: 241 GRNFRNEGISIKHNPEFTMMELYQAYANYEDIMELTENMISEIAKEVHGTTEVTYQEQTI 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK-FVIESSPSV 423
+ PWRR M + E G+DF ++ D + A++ KDK +E S
Sbjct: 301 DFKTPWRRLPMLEGILEYAGVDFGQILTD-EAAQQAA----------KDKGLKVEPGSSR 349
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++NE FE VEP L+QPTFV+ +P+EISPLAK + H T+RFE F GRE+ NAFS
Sbjct: 350 GKIINEFFEEYVEPNLIQPTFVIGHPVEISPLAKRNAEHPEYTDRFEAFAYGRELGNAFS 409
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E QV + + + DD ++ +D+DFV ALEYG
Sbjct: 410 ELNDPIDQRQRFEAQVAERD------------------KGDDEAH--MMDEDFVQALEYG 449
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+GIDRLVMLLT+S SIRDVI FP ++
Sbjct: 450 LPPTGGLGIGIDRLVMLLTDSPSIRDVILFPTMR 483
>gi|397906153|ref|ZP_10506977.1| Lysyl-tRNA synthetase (class II) [Caloramator australicus RC3]
gi|397160787|emb|CCJ34312.1| Lysyl-tRNA synthetase (class II) [Caloramator australicus RC3]
Length = 508
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 328/514 (63%), Gaps = 37/514 (7%)
Query: 66 RIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R+ K+++LR+KG +P+ K+DRTH++ Q+++ Y L E V VAGR++ +R
Sbjct: 27 RLAKLDDLRAKGQDPFLITKYDRTHTSKQVKDNYEEL--------EGKDVKVAGRLMTKR 78
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G +QLY + + + ++ K +DIGDI+GV G++ +T+ GE+S+
Sbjct: 79 IHGKAGFADIHDRYGKLQLYVKIDDIGEEKLKAFKT-LDIGDIIGVEGTVFKTKTGEISI 137
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +++LTKSL PLP+K+HGL D D RYRQRYVD+I +V D F KR +I+ IRK +
Sbjct: 138 HVKDYILLTKSLRPLPEKWHGLKDPDLRYRQRYVDLIMNQDVRDTFFKRTQIIRAIRKFL 197
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL A GA ARPF+T+ N+L DLYLRIATEL+LKR+++GGFEK+YE+
Sbjct: 198 DDRDFIEVETPVLSPIASGAAARPFITHSNALDIDLYLRIATELYLKRLIVGGFEKVYEM 257
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEF IE+YEAY+DY MM +TE +V V G ++YQG EI
Sbjct: 258 GKNFRNEGIDIRHNPEFNMIEIYEAYADYNDMMELTENLVAFVCQEVLGTTKVNYQGTEI 317
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE-SSPSV 423
PW R TM VK+ +DF+E+ D + R + L D+ E +
Sbjct: 318 DFAPPWNRLTMKEAVKKYANVDFDEIKTDEEA------REIAKKLNVLDELKKELKDCTK 371
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++L VFE E L+QPTF+LDYP+E+SPL K TERFE ++ GRE+ANA+S
Sbjct: 372 GDILVAVFETYAEKHLIQPTFILDYPVEVSPLTKKKPDDPMFTERFEAYVYGREIANAYS 431
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R +Q+R+ + DD +Y +D+DF+ ALE G
Sbjct: 432 ELNDPIDQKERFLQQLRER------------------ELGDDEAY--MMDEDFINALEIG 471
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+G+DRL+M LT+S SIRDVI FP +K
Sbjct: 472 MPPTGGLGIGVDRLIMFLTDSYSIRDVILFPTMK 505
>gi|381184315|ref|ZP_09892948.1| lysyl-tRNA synthetase [Listeriaceae bacterium TTU M1-001]
gi|380315796|gb|EIA19282.1| lysyl-tRNA synthetase [Listeriaceae bacterium TTU M1-001]
Length = 497
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR+ G++P+ K+ R+ S +++E Y+ + E+ N VSVAGR++ +R
Sbjct: 15 VRREKVDTLRNIGVDPFGEKFVRSTSPEEIEEKYKDKSK-EDLEEANIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D IQ+Y K+ + +++D K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQIQIYIRKDNIGEEKYDIFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
FV+LTK+L PLPDKYHGL DV++RYRQRY+D+I+ E F R+KI+ R +
Sbjct: 133 KATDFVLLTKALRPLPDKYHGLKDVEQRYRQRYLDLITNEESQKRFVMRSKILKYTRDYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ G++EVETPVL AGGA A+PF+T+HN+L DLYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGYLEVETPVLHTVAGGAAAKPFITHHNALDMDLYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E Y AY D++ +MN+ E +V++ A G T+ Y E+
Sbjct: 253 GRVFRNEGISTRHNPEFTMLESYAAYEDFEDVMNLVEGLVSYVAEKATGGTTVTYGEYEV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R M + VKE G+ DL A R L K I + G
Sbjct: 313 DLAPKWTRIHMADAVKEYAGV-------DLWNATTEEARELA----KKHNVEITEHMTYG 361
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK + + T+RFELFI GRE ANAFSE
Sbjct: 362 HILNEFFETFVEEKLIQPTFVYGHPVEISPLAKMSKTDSRFTDRFELFIVGREHANAFSE 421
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+ + ++ +D ++E +DDDF+ ALE G+
Sbjct: 422 LNDPIDQRKRFESQLIER------------------EQGNDEAHE--MDDDFLVALEQGL 461
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRL+MLLTN+ SIRDV+ FP +K
Sbjct: 462 PPTGGLGIGMDRLIMLLTNAPSIRDVLLFPTMK 494
>gi|293376909|ref|ZP_06623126.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
gi|325838530|ref|ZP_08166552.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
gi|292644455|gb|EFF62548.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
gi|325490825|gb|EGC93127.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
Length = 495
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/529 (45%), Positives = 340/529 (64%), Gaps = 40/529 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S+T +D+ VR K+E+LR G++P+ +++RTH ++QL E + + EE +N
Sbjct: 2 STTEINDQLQVRR---DKMEDLRQHGIDPFGQRFNRTHLSSQLVEEFGEFSK-EELEEKN 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDIL 168
V++AGR+ +R GK F ++D G +Q+Y ++ + + FD+ D+GDI+
Sbjct: 58 IEVAIAGRIRTKRGKGKAGFAHIQDIKGQVQIYVRQDAVGEEAYAFFDK----ADLGDIV 113
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G + +T+ GELS+ V + LTK+L PLP+KYHGLTDV++RYR+RYVD+I E
Sbjct: 114 GVRGVVFKTKVGELSIKVKEYTPLTKALRPLPEKYHGLTDVEERYRRRYVDLIMNEESKQ 173
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R +I++ +R+ +++LG++EVETP+L GGA ARPF T+HN+L LYLRIATEL
Sbjct: 174 TFITRTRIITAMRRYLDNLGYLEVETPILHTTLGGAAARPFETHHNALDMPLYLRIATEL 233
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+L+GG EK+YEIGRIFRNEG+S RHNPEFT+IE+YEAY D ++MM++TE ++ A
Sbjct: 234 HLKRLLVGGLEKVYEIGRIFRNEGISVRHNPEFTSIELYEAYGDMETMMDLTENMIASIA 293
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G T+ Y G EI L W+R M + +KE TG+DF KE T
Sbjct: 294 QEVLGTTTVPYGGHEINLAVGWKRWHMVDAIKEITGVDF---------FKEMTFEEAKAI 344
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+ + V VG+++N FE VE K+VQPTF+ +P+E+SPLAK + + T+R
Sbjct: 345 AKEHNVEVPTHFTGVGHIINAFFEEFVEDKIVQPTFIYGHPVEVSPLAKKNAKDPRFTDR 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI GRE NAF+EL DP+DQ+ R E Q ++EK ++ E
Sbjct: 405 FEFFIDGREYGNAFTELNDPIDQKERFEAQ-----------LAEKELGNDEASE------ 447
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D++ ALEYGMPPA G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 448 ---MDVDYIEALEYGMPPAGGLGIGIDRLVMLLTNSPSIRDVLLFPTMR 493
>gi|312144280|ref|YP_003995726.1| lysyl-tRNA synthetase [Halanaerobium hydrogeniformans]
gi|311904931|gb|ADQ15372.1| lysyl-tRNA synthetase [Halanaerobium hydrogeniformans]
Length = 491
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/512 (46%), Positives = 343/512 (66%), Gaps = 41/512 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K+ ELR + + +A K++ TH A ++++ Y L E+ V +AGR++A R
Sbjct: 16 RREKLAELREE--KAFAEKYETTHHAAEIEKNYEEL--------EDKEVKLAGRLMAIRT 65
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK +F L D + +QLY ++ + D+++ + +D+GDI+G++G++ +T +GE+S+
Sbjct: 66 HGKASFADLMDMTSKVQLYIKQNNVGEDRYEFFQN-LDLGDIIGITGTVFKTRRGEVSIN 124
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V+SF +LTK+L PLP+K+HGL D D RYRQRY+D+I P+V + F R+KI+ E+R +E
Sbjct: 125 VSSFELLTKALRPLPEKFHGLKDKDIRYRQRYLDLIVNPDVKETFVIRSKIIREMRNFLE 184
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP++ AGGA ARPFVT+HN+L DLYLRIA EL+LKR+++GGFEK++EI
Sbjct: 185 EKGFLEVETPMMHPIAGGATARPFVTHHNTLDMDLYLRIAPELYLKRLIVGGFEKVFEIN 244
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S +HNPEFTT+E+Y+A +DY MM +TE ++ + V K ++Y+G E+
Sbjct: 245 RNFRNEGMSYKHNPEFTTLELYQAQADYHDMMELTENLIYSLSKKVLDKTVVEYEGTELD 304
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
L PWRR TM VKE G+DF E+ + A E A G++ E S G
Sbjct: 305 LTTPWRRITMVEAVKEYAGVDFTEIDS----AAEAYELANSIGIKP------EEGLSYGE 354
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
+LNE+FE VE KL+QPTFV+DYPIE+SPLAK T RFE FI GRE+ANAFSEL
Sbjct: 355 VLNEIFEERVEEKLIQPTFVMDYPIEVSPLAKKIADDPRFTYRFEGFIYGREIANAFSEL 414
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP +Q++R E+QV +++E+ D ++ +D DF+ ALEYGMP
Sbjct: 415 NDPEEQKSRFEKQV-------------------EMREAGDEEAQM-MDFDFIRALEYGMP 454
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRL+MLLT+S+SIRDVI FP ++
Sbjct: 455 PTGGLGIGIDRLIMLLTDSSSIRDVILFPTMR 486
>gi|329767267|ref|ZP_08258794.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
gi|328836934|gb|EGF86581.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
Length = 499
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 331/513 (64%), Gaps = 33/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E +R GL+P+ K++RTH ++Q+ Y + EE +N V++AGR++ +R
Sbjct: 18 VRREKMEAMRESGLDPFGTKFERTHLSDQIVAEYDKFSK-EELEEKNISVTIAGRIMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y ++R+ D ++ K +D+GDI+GV+G + +T GELSV
Sbjct: 77 GKGKAGFAHVQDLGGQVQIYVRQDRV-GDSYEYFKT-LDLGDIVGVTGVLFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ILTK+L PLPDK+HGL DV++RYR+RYVD+I + + F R+KI+ +R +
Sbjct: 135 KADKFEILTKALRPLPDKFHGLKDVEERYRRRYVDLIMNEDSKETFILRSKIIQIMRSYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
G++EVETP++ AGGA ARPFVT+HN+L L++RIA EL LKR+++GG EK+YEI
Sbjct: 195 NERGYLEVETPMMHSVAGGAAARPFVTHHNALDMQLFMRIALELPLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+STRHNPEFT IE+YEAY+DY +M++TE ++ + ++G I Y EI
Sbjct: 255 GRAFRNEGVSTRHNPEFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTKIMYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + +KE TG+DF D A L + + VG
Sbjct: 315 DLTPKWRRVHMVDAIKEVTGVDFWPEMTD----------AEAHALAKEHNVPVRKDMKVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTFV +P+E+SPLAK + T+RFELFI RE ANAFSE
Sbjct: 365 HIINEFFETFVEETLVQPTFVYGHPVEVSPLAKTNAEDTRFTDRFELFIVRREHANAFSE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R A + EK + E++ E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQKERF-----------LAQMDEKDAGNEEVYE---------MDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 465 PPTGGLGIGIDRLVMLLTNSASIRDVLLFPYMK 497
>gi|451949108|ref|YP_007469703.1| lysyl-tRNA synthetase (class II) [Desulfocapsa sulfexigens DSM
10523]
gi|451908456|gb|AGF80050.1| lysyl-tRNA synthetase (class II) [Desulfocapsa sulfexigens DSM
10523]
Length = 507
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/512 (46%), Positives = 331/512 (64%), Gaps = 32/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K + L G+ Y+ + + +L HLA E + N S+AGR+++ R
Sbjct: 12 RREKADALSDLGVNLYSNGFKPDNRIKELIPKGEHLA-AETLDETNYTYSIAGRIMSMRK 70
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF L D SG IQ+Y +K+ L + F K + DIGDI+G+ G + +T+ GELSVL
Sbjct: 71 FGKAAFFHLVDSSGRIQVYIKKDALGDEIFSSFKKW-DIGDIVGIEGKLFKTKTGELSVL 129
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+ V+++KSL PLP+K+HGLTDV+ RYRQRYVD+I P+ + F+KR +IV IR+ +
Sbjct: 130 ADKLVMISKSLRPLPEKFHGLTDVETRYRQRYVDLIVTPQSRETFKKRVEIVRLIREFLS 189
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++ GGA A+PF T+HN+L +L+LRIA EL+LKR+L+GGFE+++EI
Sbjct: 190 NRGFMEVETPMMHSVPGGATAKPFKTHHNALDMELFLRIAPELYLKRLLVGGFERVFEIN 249
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEGLSTRHNPEFT +E Y+AY+ Y +M +TEE+++ VN + I+YQG +
Sbjct: 250 RNFRNEGLSTRHNPEFTMLEFYQAYATYHDLMELTEEMISWLCDEVNDTMEIEYQGTRVN 309
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
L PW+R TM + E GID +L +D KV L + +E G
Sbjct: 310 LAPPWKRMTMDEALTEVAGIDAADLADDEKVL----------SLAREKGIQLEEQAGPGK 359
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
E+FE++VE KL+ PTF+ YP E+SPLA+ + + +T+RFELF+ GRE+ANAFSEL
Sbjct: 360 AKTELFELLVEEKLIDPTFITAYPTEVSPLARRNEENPDVTDRFELFVTGRELANAFSEL 419
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQR R ++Q+ + K +DD + V LD+DFV ALEYGMP
Sbjct: 420 NDPIDQRQRFQKQIDE-------------------KGNDDEIHSV-LDEDFVRALEYGMP 459
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
A+G G+GIDRLVMLLT+S SIRDVI FP LK
Sbjct: 460 SAAGEGIGIDRLVMLLTDSPSIRDVILFPHLK 491
>gi|307243777|ref|ZP_07525911.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306492853|gb|EFM64872.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 636
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/522 (44%), Positives = 337/522 (64%), Gaps = 50/522 (9%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
V +R K+ EL+ G +P+ K++ +H +N++ + Y L E VS+AGR+
Sbjct: 16 VLQVRRDKLSELQKMGRDPFKISKYNVSHHSNEVVDNYDSL--------EGQKVSLAGRI 67
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK +F+ L+D +G IQ Y +++ + D++ K + DIGDI+G+ G + +T+
Sbjct: 68 MSKRIMGKASFMHLQDQNGRIQAYVKRDDIGVDEYKLFKTY-DIGDIVGIEGFVFKTKTE 126
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+SV V V+L+KSL LP+KYHGL DVD RYRQRYVD+I PEV D F R K + +
Sbjct: 127 EVSVHVEKLVLLSKSLQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKDAFLTRTKALKAL 186
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R ++ GF+EVETP+L AGGA ARPF+T+HN+L +YLRIA EL+LKR+++GGF+K
Sbjct: 187 RSYLDERGFLEVETPILNTIAGGANARPFITHHNTLDIPMYLRIANELYLKRLIVGGFDK 246
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY+ MM+ITE +++H A G + I+YQ
Sbjct: 247 VYEMGRMFRNEGMDMKHNPEYTAIELYQAYADYKDMMDITENVISHMAQVATGSMKINYQ 306
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVI 417
G EI PW+R TM VKE G+DF+E+ D L +A+E I
Sbjct: 307 GTEIDFTPPWKRMTMEECVKEYAGVDFSEINTDEEALAIAREKG---------------I 351
Query: 418 ESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E +P + G ++N FE E KL+QPTF+ +P+E+SPLAK + T+RFE F
Sbjct: 352 EITPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLAKRNVEDPRRTDRFEAFANK 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
E+ANAFSEL DP+DQR R E+QVR K + DD + E +D+D
Sbjct: 412 WELANAFSELNDPIDQRGRFEDQVR------------------KRELGDDEACE--MDED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE G+PP G+G+GIDR++MLLT+S +IRDV+ FP +K
Sbjct: 452 FINALEVGLPPTGGLGIGIDRVIMLLTDSTTIRDVLLFPTMK 493
>gi|421765969|ref|ZP_16202748.1| Lysyl-tRNA synthetase (class II) [Lactococcus garvieae DCC43]
gi|407625530|gb|EKF52230.1| Lysyl-tRNA synthetase (class II) [Lactococcus garvieae DCC43]
Length = 495
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 330/515 (64%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+E LR G++P+ +K+ RTH++ +L Y N +E E D H ++AGR++ +
Sbjct: 14 VRREKMETLREAGIDPFGHKFTRTHNSAELHAAYD--ENTKEDLHEKDLHATIAGRLMTK 71
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F ++D G IQ+Y K+ + + + K D+GD LGV G + +T+ GELS
Sbjct: 72 RGKGKVGFAHIQDREGQIQIYVRKDEVGEENYQIFKQ-ADLGDFLGVEGQIMKTDMGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ + L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SEIR+
Sbjct: 131 IKASKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG EK+YE
Sbjct: 191 MDGRGYLEVETPVLNNEAGGAAARPFYTHHNSLDIDMALRIATELHLKRLIVGGMEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ HNPEFTT+E YEAY+D+ +M++TE I H A AV GK I+Y G E
Sbjct: 251 LGRVFRNEGMDMTHNPEFTTMESYEAYADFDDIMDLTEGIFQHVAHAVLGKDVIEYDGKE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I + + R M + +KE TG+DF KE L + D +V + SV
Sbjct: 311 INVGGKFNRIHMVDAIKEQTGVDF---------WKEMNLEEAVSLAKEHDIYVEKHFTSV 361
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE LVQPTFV +P EISPLAK + T+RFELFI G+E ANAFS
Sbjct: 362 GHIINEFFEKYVEDTLVQPTFVFGHPKEISPLAKMNEEDPRFTDRFELFINGKEYANAFS 421
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ R E AQ K KE DD + +D D+V ALE+
Sbjct: 422 ELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVEALEH 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 461 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 495
>gi|366087307|ref|ZP_09453792.1| lysyl-tRNA synthetase [Lactobacillus zeae KCTC 3804]
Length = 498
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/521 (46%), Positives = 342/521 (65%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTHSA Q++E + GE+ E V++AGR++
Sbjct: 18 RREKMEALREAGIDPFGHRFDRTHSAAQVREDF-----GEDDKETLLEEKPKVTIAGRMM 72
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 73 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 131
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 132 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 191
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 192 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 251
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 252 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDSGKLT--Y 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG++I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 310 QGMDIDLDAPFARINMVDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 356
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + ++ ERFELF+ G
Sbjct: 357 YEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKNPRFVERFELFVGGG 416
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EKS+ E+ + +DDD+
Sbjct: 417 EYANAFTELNDPIDQRKRFEAQ-----------AAEKSAGNEEAQ---------GIDDDY 456
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 457 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 497
>gi|452993673|emb|CCQ94798.1| lysyl-tRNA synthetase [Clostridium ultunense Esp]
Length = 494
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 338/514 (65%), Gaps = 40/514 (7%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K++EL G P+ K+D TH +N +++ + L E + VSVAGR+++R
Sbjct: 14 IRREKLKELIEMGENPFLVEKYDYTHYSNTIKDNFEEL--------EEETVSVAGRIMSR 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK++F+ ++D G IQ++ + + + + + +L + +D+GDI+G+ G + +T+ GE+S
Sbjct: 66 RGHGKVSFMDVQDSKGRIQIFVKMDVIGEETYKKLNL-LDLGDIIGIKGEVFKTKTGEIS 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ ++LTKSL LP+K+HGL D D RYRQRYVD+I PEV + F R+KI+ +R+
Sbjct: 125 IRAKEIILLTKSLQILPEKFHGLKDQDLRYRQRYVDLIVNPEVKETFILRSKIIKAVREY 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ F+EV+TP+L AGGA ARPFVT+HN+L D+YLRIA EL+LKR+++GGFEK+YE
Sbjct: 185 LDERDFLEVDTPILNTIAGGANARPFVTHHNTLDLDMYLRIANELYLKRLIVGGFEKVYE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+S +HNPEFT IE+Y+AY+DY+ MM +TEE++ + A G I+YQG E
Sbjct: 245 MGRMFRNEGMSYKHNPEFTNIELYQAYADYEDMMELTEELIAYVAEKTLGSTKINYQGKE 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L PWRR +M + +K+ GIDFN + D + A+ + L IE S
Sbjct: 305 IDLTPPWRRLSMIDAIKKYVGIDFNTIDTDEEAAEIAKAKGLD----------IEPSMKR 354
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++++E+FE E L+QPTF+ +P+E+SPLAK + LT RFE FI E+ANAFS
Sbjct: 355 GHIISEMFEEFCEQHLIQPTFITHHPVEVSPLAKRNPDDPRLTNRFEAFINTWEIANAFS 414
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R EQ +Q +E+ DH + +D DFV ALE G
Sbjct: 415 ELNDPIDQKERFAEQAKQ-------------------REAGDHEAHM-MDMDFVNALEVG 454
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+GIDRL++LLTN SIRDVI FP +K
Sbjct: 455 LPPTGGLGIGIDRLIILLTNQPSIRDVILFPTMK 488
>gi|335427918|ref|ZP_08554838.1| lysyl-tRNA synthetase [Haloplasma contractile SSD-17B]
gi|334893844|gb|EGM32053.1| lysyl-tRNA synthetase [Haloplasma contractile SSD-17B]
Length = 499
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/517 (45%), Positives = 337/517 (65%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR KG++P+ ++D+TH+ QL+ Y + EE + HV++AGR++ +R
Sbjct: 15 VRREKMKELRDKGIDPFGKRFDKTHNTEQLKNSYEKFSK-EELAEKEIHVTIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK F+ ++D G +Q+Y K+ + D ++ +F D+GDI+G+ G+M +T+ GEL
Sbjct: 74 GKGKAGFMHIQDQEGQVQIYVRKDTVGEDSYE---IFSKADLGDIVGIKGTMFKTKVGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV ++ L+KSL PLP+KYHGL D+++RYR+RYVD+I+ F R+K++S +R
Sbjct: 131 SVKAKEYIHLSKSLRPLPEKYHGLQDIEERYRRRYVDLITNENSKKTFILRSKMMSSMRD 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+ G++EVETP+L GGA A+PFVT+HN+L DLYLRIA EL+LKR+++GGFE +Y
Sbjct: 191 FLNQKGYLEVETPILHTILGGATAKPFVTHHNTLDMDLYLRIAPELYLKRLIVGGFEGVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+S +HNPEFT++E+Y AYSD MM ITE+++ H A +I Y +
Sbjct: 251 EIGRLFRNEGMSIKHNPEFTSMELYVAYSDMDGMMEITEDMIIHIANETLKTTSISYGEL 310
Query: 363 EICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L + WRR M + +KE TG+DF NE+ D L NK + +
Sbjct: 311 EIDLSKGWRRWHMVDAIKELTGVDFWNEMTFD-----------EAKSLANKHDINVPAHF 359
Query: 422 S-VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
S VG+++NE FE VE +L+QPTF+ +P+EISPLAK + T+RFELFI RE AN
Sbjct: 360 SGVGHIINEFFEKYVEEQLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIGSREYAN 419
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQR R E Q++ E+ ++ E +D D+V AL
Sbjct: 420 AFSELNDPIDQRDRFESQLK-----------ERELGNDEANE---------MDIDYVEAL 459
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGM P G+G+GIDRL+MLLTNS SIRDV+ FP +K
Sbjct: 460 EYGMAPTGGLGVGIDRLIMLLTNSQSIRDVLLFPTMK 496
>gi|306833932|ref|ZP_07467056.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
gi|304423933|gb|EFM27075.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
Length = 496
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/514 (45%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTK-EELHEINKTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 74 GKGKVGFAHIQDRDGQIQVYVRKDAVGDENYQIFKK-ADLGDFLGIEGEIMRTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ +YR+RY+D++S E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETKYRKRYLDLVSNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE I+ H + AV G I YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF KE TL + K+ V + SVG
Sbjct: 313 AIDKPFKRVHMVDAIKEVTGVDF---------WKEMTLEEAQAIAKEKNVPVEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|148381459|ref|YP_001256000.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153932316|ref|YP_001385834.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153936702|ref|YP_001389241.1| lysyl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|229559854|sp|A7FZA5.1|SYK_CLOB1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|229559855|sp|A5I7P4.1|SYK_CLOBH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|148290943|emb|CAL85079.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152928360|gb|ABS33860.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152932616|gb|ABS38115.1| lysine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 504
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 336/518 (64%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ +++E Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKENYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFMKRTAIIKTMREYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNKGFLEVETPILSPIAGGAAAKPFITHHNALNIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G + Y+G EI
Sbjct: 253 GRNFRNEGMDIRHNPEFTVIELYEAYADYNDMMEITENMIAYICEKVLGTTKVQYEGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + V+E G+DFN + +D++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVREYAGVDFNTIKDDIEARTIAKEKH-------IEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|320547204|ref|ZP_08041498.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
gi|320448191|gb|EFW88940.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
Length = 500
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/514 (45%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 19 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYSD-KTKEELHEINETATIAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 78 GKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKK-ADLGDFLGIEGEVMRTDMGELTI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 137 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPFVT+HN+ D+ LRIA ELHLKR+++GG EK+YEI
Sbjct: 197 DGLGFLEVETPVLHNEAGGAAARPFVTHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFT IE+Y+AY+D++ +M+ITE I+ + + AVNG I YQG EI
Sbjct: 257 GRVFRNEGMDATHNPEFTMIELYQAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF KE TL + + K+ V + SVG
Sbjct: 317 AIDKPFKRIHMVDAIKEVTGVDF---------WKEMTLEEAQELAKEKNVPVEKHFTSVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +P+E+SPLAK + T+RFELFI +E NA+SE
Sbjct: 368 HIINAFFEEFVEETLTQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAYSE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ AR E AQ K KE DD + V D D+V ALEYG
Sbjct: 428 LNDPIDQLARFE-------------------AQAKAKELGDDEATGV--DYDYVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRD + FP +K
Sbjct: 467 MPPTGGLGIGIDRLVMLLTDTTTIRDALLFPTMK 500
>gi|270290208|ref|ZP_06196434.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
gi|304385523|ref|ZP_07367867.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
gi|427440736|ref|ZP_18925008.1| lysyl-tRNA synthetase [Pediococcus lolii NGRI 0510Q]
gi|270281745|gb|EFA27577.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
gi|304328027|gb|EFL95249.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
gi|425787443|dbj|GAC45796.1| lysyl-tRNA synthetase [Pediococcus lolii NGRI 0510Q]
Length = 498
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 342/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR KG++P+ ++++RTH A QL E Y ++ EE + +VAGR+V++R
Sbjct: 15 VRREKMQELRDKGIDPFGHRFERTHLAAQLHEKYGDMSK-EEIEEQGVVATVAGRMVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK+ F L+D SG IQLY K+ L D + K+F D+GD LGV+G + +T+ GEL
Sbjct: 74 GKGKVGFADLKDRSGKIQLYVRKDELGEDVY---KIFKRADLGDFLGVTGDVMKTDMGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++ V S L+K+L PLPDK+HGL +V++ YRQRY+D+I+ E + FRKR KIVS IR+
Sbjct: 131 TIKVTSLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLIANDESMERFRKRTKIVSAIRR 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ GF EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++Y
Sbjct: 191 YLDDHGFAEVETPVLHTQAGGASARPFITHHNALDIDLYLRIALELHLKRLIVGGMERVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I+ AV+ I YQG
Sbjct: 251 EIGRVFRNEGIDTRHNPEFTMLETYVAYYDFHDVMDETEGILKAAVNAVSDDGKITYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
E+ L + + R M + +K+ G+DF ++ V + R L D E+ K+ ES +
Sbjct: 311 ELDLNQDFERLHMVDAIKKYAGVDF---WPEMSVEE---ARKLAD--EHGVKY--ESWWT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE V+ +L QP F+ +P+EISPLAK + T+RFEL+I G E NAF
Sbjct: 361 VGHIINEFFEDKVQDQLKQPVFIYGHPVEISPLAKKNADDPRFTDRFELYILGNEYGNAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E Q V+E+ + E+ + +D+D++ ALEY
Sbjct: 421 TELNDPIDQRQRFEAQ-----------VAEREAGNEEAE---------GIDEDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 495
>gi|336064681|ref|YP_004559540.1| lysyl-tRNA synthetase, class II [Streptococcus pasteurianus ATCC
43144]
gi|334282881|dbj|BAK30454.1| lysyl-tRNA synthetase, class II [Streptococcus pasteurianus ATCC
43144]
Length = 496
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTK-EELHEINKTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 74 GKGKVGFAHIQDRDGQIQVYVRKDAVGDENYQIFKK-ADLGDFLGIEGEIMRTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ +YR+RY+D++S E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETKYRKRYLDLVSNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE I+ H + AV G I YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF +E TL + K+ V + SVG
Sbjct: 313 AIDKPFKRVHMVDAIKEVTGVDF---------WQEMTLEEAQAIAKEKNVPVEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAENPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|51245481|ref|YP_065365.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|50876518|emb|CAG36358.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
Length = 503
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/517 (45%), Positives = 326/517 (63%), Gaps = 38/517 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K EL G++ Y + HS Q+ + L E+ + SVAGRV+A R
Sbjct: 11 RREKAAELADLGVKLYDNTFHPAHSVAQVLPMGESLV-AEQHDESTTEYSVAGRVMAMRK 69
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF + D +G +Q+Y +K+ + + F Q K + DIGDI+G+ G + +T+ GELS+
Sbjct: 70 FGKAAFFQVMDKTGRVQIYIKKDVIGEEIFAQFKKW-DIGDIVGIKGHLFKTKVGELSIA 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+S +++KSL PLPDK+HGL+DV+ RYRQRYVD+I PE +VFRKR +I+ IR +
Sbjct: 129 ASSVQMISKSLRPLPDKWHGLSDVETRYRQRYVDLIVTPESREVFRKRGEIIRHIRDFLS 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP++Q GGA A+PF T+HN+L DLYLR+A EL+LKR+L+GG E+++EI
Sbjct: 189 DRGFMEVETPMMQAVPGGATAKPFKTHHNALDMDLYLRVAPELYLKRLLVGGLERVFEIN 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEGLSTRHNPEFT +E Y+AY+ Y+ MM+ITEE+V+ VNG + I YQG ++
Sbjct: 249 RNFRNEGLSTRHNPEFTMLEFYQAYATYEDMMDITEEMVSTACEKVNGSMQIQYQGTDVN 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGN---DLKVAKETTLRALGDGLENKDKFVIESSPS 422
L PW+R TM + + GI + + + +AKE +R +E +
Sbjct: 309 LAPPWQRMTMQESLTKVAGIAPEIMADAEATIALAKEKGIR-------------LEETAG 355
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G + E+FE++VE KL+ PTF+ YP E+SPLA+ + T+RFELFI GRE+ANAF
Sbjct: 356 HGKAMTELFELLVEEKLIDPTFITSYPTEVSPLARRNDEDPSTTDRFELFITGRELANAF 415
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ R +Q+ + DD LD D++ ALEY
Sbjct: 416 SELNDPVDQYQRFAKQIAERG--------------------DDEEIHPELDHDYIRALEY 455
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMP A+G G+GIDRL MLLT+S SIRDVI FP LK +
Sbjct: 456 GMPSAAGEGIGIDRLTMLLTDSPSIRDVIFFPHLKAE 492
>gi|418069799|ref|ZP_12707076.1| lysyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
gi|357536330|gb|EHJ20361.1| lysyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
Length = 498
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/515 (46%), Positives = 342/515 (66%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR KG++P+ ++++RTH A QL E Y ++ EE + +VAGR+V++R
Sbjct: 15 VRREKMQELRDKGIDPFGHRFERTHLAAQLHEKYGDMSK-EEIEEQGVVATVAGRMVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK+ F L+D SG IQLY K+ L D + K+F D+GD LG++G + +T+ GEL
Sbjct: 74 GKGKVGFADLKDRSGKIQLYVRKDELGEDVY---KIFKRADLGDFLGITGDVMKTDMGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++ V S L+K+L PLPDK+HGL +V++ YRQRY+D+I+ E + FRKR KIVS IR+
Sbjct: 131 TIKVTSLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLIANDESMERFRKRTKIVSAIRR 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ GF EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++Y
Sbjct: 191 YLDDHGFAEVETPVLHTQAGGASARPFITHHNALDIDLYLRIALELHLKRLIVGGMERVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I+ AV+ I YQG
Sbjct: 251 EIGRVFRNEGIDTRHNPEFTMLETYVAYYDFHDVMDETEGILKAAVNAVSDDGKITYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
E+ L + + R M + +K+ G+DF ++ V + R L D E+ K+ ES +
Sbjct: 311 ELDLNQDFERLHMVDAIKKYAGVDF---WPEMSVEE---ARKLAD--EHGVKY--ESWWT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE V+ +L QP F+ +P+EISPLAK + T+RFEL+I G E NAF
Sbjct: 361 VGHIINEFFEDKVQDQLKQPVFIYGHPVEISPLAKKNADDPRFTDRFELYILGNEYGNAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E Q V+E+ + E+ + +D+D++ ALEY
Sbjct: 421 TELNDPIDQRQRFEAQ-----------VAEREAGNEEAE---------GIDEDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 495
>gi|226950975|ref|YP_002806066.1| lysyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
gi|226841230|gb|ACO83896.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 504
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 338/518 (65%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ ++++ Y +L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYENL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G ++Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + ND++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNIIKNDIEARTIAKEKH-------IEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|331701912|ref|YP_004398871.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
gi|406027383|ref|YP_006726215.1| lysyl-tRNA synthetase [Lactobacillus buchneri CD034]
gi|329129255|gb|AEB73808.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
gi|405125872|gb|AFS00633.1| lysyl-tRNA synthetase [Lactobacillus buchneri CD034]
Length = 501
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 335/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR +G++P+ +++ RT+ A QL + + +E ++ V++AGR++A+R
Sbjct: 13 VRRQKMDELRKEGIDPFGHRFVRTYLAEQLHHDFDD-EDKDELMEKDKKVTIAGRMIAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G IQ+Y K+ + D + K DIGD LG+SG + +T+ GEL+V
Sbjct: 72 GKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKR-SDIGDHLGISGQIIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDK+HGL D ++RYRQRY+D+IS + D F KR KIVS +RK +
Sbjct: 131 RAESVTFLSKALRPLPDKFHGLKDKEQRYRQRYLDLISNQDSFDRFVKRTKIVSAVRKYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S + EVETPVL +AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DSNDYQEVETPVLHNSAGGANARPFITHHNALNIDLYLRIALELHLKRLIVGGLERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I A AV + YQG +
Sbjct: 251 GRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAAAVTDDNVVTYQGHTV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L +P++R+ M + +KE TGIDF + +D K L ++ E G
Sbjct: 311 DLNKPFKRQHMVDAIKEYTGIDFWQPMSDDDAKK----------LADEHHIHYEPWWKTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE +V+PKL QPTF+ +P+EISPLAK + T+RFEL+I E ANAFSE
Sbjct: 361 HIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNHDDPRFTDRFELYILTNEFANAFSE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q V+E+ + E+ + +D+D++ ALEYGM
Sbjct: 421 LNDPIDQRQRFEAQ-----------VAERKAGNEEAE---------GIDEDYIEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDVI FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVILFPTMR 493
>gi|325261222|ref|ZP_08127960.1| lysine--tRNA ligase [Clostridium sp. D5]
gi|324032676|gb|EGB93953.1| lysine--tRNA ligase [Clostridium sp. D5]
Length = 649
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/521 (45%), Positives = 340/521 (65%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K+ EL+ G +P+ K+D+TH + ++++ Y L E VS+
Sbjct: 19 DLNQLRKVRREKLAELQQNGKDPFVTTKYDQTHHSQEIKDQYEEL--------EGKTVSI 70
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F ++D G IQ Y ++ + D + + K +D+GD++G+ G + R
Sbjct: 71 AGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEDVYKEFKK-MDVGDVVGIVGEVFR 129
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ +S +L+KSL LP+K+HGLT+ D RYRQRYVD+I PEV D F KR+KI
Sbjct: 130 TKTGEMSIHASSVKLLSKSLQILPEKFHGLTNTDIRYRQRYVDLIMNPEVKDTFIKRSKI 189
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S IR+ +++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++G
Sbjct: 190 LSAIRRYLDADGFMEVETPMLVSNAGGAAARPFETHFNALDEDFKLRISLELYLKRLIVG 249
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G T
Sbjct: 250 GMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTT 309
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I Y GVE+ L +P+ R TM + VK+ GIDFNE ++ +E A G+E +D+
Sbjct: 310 IVYNGVEMDLGKPFERITMVDAVKKYAGIDFNE----IQTTEEAKALAKEKGIEFEDRH- 364
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
G++L+ FE VE LVQPTFV+D+PIEISPL K + ERFE F+ G
Sbjct: 365 -----KKGDILSLFFEEFVEEHLVQPTFVMDHPIEISPLTKKKPENPDYVERFEFFMNGW 419
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + Q +E L + D+ + T D+DF
Sbjct: 420 EMANAYSELNDPIDQRERFKAQ------------------EELLAQGDEEAN--TTDEDF 459
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+ MLLT+SA+IRDV+ FP +K
Sbjct: 460 LNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMK 500
>gi|241890039|ref|ZP_04777337.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
gi|241863661|gb|EER68045.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
Length = 499
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 331/513 (64%), Gaps = 33/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E +R GL+P+ K++RTH +N++ Y + EE +N V++AGR++ +R
Sbjct: 18 VRREKMEAMRESGLDPFGTKFERTHLSNEIVAEYDKYSK-EELEEKNISVTIAGRIMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y ++R+ D ++ K +D+GDI+GV+G + +T GELSV
Sbjct: 77 GKGKAGFAHVQDLGGQVQIYVRQDRV-GDSYEYFKT-LDLGDIVGVTGVLFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ILTK+L PLPDK+HGL DV++RYR+RYVD+I E + F R+KI+ +R +
Sbjct: 135 KADEFEILTKALRPLPDKFHGLKDVEERYRRRYVDLIMNEESKETFILRSKIIQIMRSYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
G++EVETP++ AGGA ARPFVT+HN+L L++RIA EL LKR+++GG EK+YEI
Sbjct: 195 NERGYLEVETPMMHSVAGGAAARPFVTHHNALDMQLFMRIALELPLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+STRHNPEFT IE+YEAY+DY +M++TE ++ + ++G + Y EI
Sbjct: 255 GRAFRNEGVSTRHNPEFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTKVMYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + +KE TG+DF D + L + + VG
Sbjct: 315 DLTPKWRRVHMVDAIKEVTGVDFWPEMTDEQ----------AHALAKEHNVPVRKDMKVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTFV +P+E+SPLAK + T+RFELFI RE ANAFSE
Sbjct: 365 HIINEFFETFVEETLVQPTFVYGHPVEVSPLAKTNAEDTRFTDRFELFIVRREHANAFSE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R Q + EK + E++ E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQKERFLSQ-----------MDEKDAGNEEVYE---------MDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 465 PPTGGLGIGIDRLVMLLTNSASIRDVLLFPYMK 497
>gi|169825711|ref|YP_001695869.1| lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
gi|259511527|sp|B1HSY5.1|SYK_LYSSC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|168990199|gb|ACA37739.1| Lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
Length = 500
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 342/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN-DHVSVAGRVVAR 123
+R +K+ + G +P+ +++RTH + +++E + +E EN V +AGR++ +
Sbjct: 16 VRRQKMTTILENGQDPFGSRFERTHLSTEVKEQF--ADQTKEQLEENLQEVIIAGRIMTK 73
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y ++ + + ++ K D+GDI+G+ G++ RT+ GELS
Sbjct: 74 RGKGKAGFAHIQDLGGQIQIYVRQDHVGEEAYELFKQ-ADLGDIVGIRGNVFRTQVGELS 132
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F LTK+L P+P+K+HGL DV++RYRQRY+D+++ + F R+KI+ IR
Sbjct: 133 VKAEEFTFLTKALRPMPEKFHGLQDVEQRYRQRYLDLMTNEDSKLTFIARSKIIRAIRNY 192
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++EVETP+L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 193 LDNAGYLEVETPMLHTIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYE 252
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DYQ +M++TE ++ H A V G T+ Y E
Sbjct: 253 IGRVFRNEGISTRHNPEFTMIELYEAYADYQDIMSLTENLIAHVAQEVLGTTTVQYGEDE 312
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSP 421
I L W+R M + VKEATG+DF + + KE +AL G+E KD
Sbjct: 313 INLAVGWKRVHMVDAVKEATGVDFWQ-----PMTKEQA-QALAKEHGVEVKD------VH 360
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE +E LVQPTFV +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 361 EVGHIINEFFEQKIEETLVQPTFVYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANA 420
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E A ++EK++ +D ++E +D+DF+ ALE
Sbjct: 421 FTELNDPIDQRQRFE-----------AQLAEKAAG-------NDEAHE--MDNDFIEALE 460
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 461 YGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMR 496
>gi|424779792|ref|ZP_18206684.1| class II lysyl-tRNA synthetase [Catellicoccus marimammalium
M35/04/3]
gi|422843542|gb|EKU27972.1| class II lysyl-tRNA synthetase [Catellicoccus marimammalium
M35/04/3]
Length = 496
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/516 (46%), Positives = 332/516 (64%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L+ +G+ P+ +++R+H L E Y A+ EE V +AGRV+ +R
Sbjct: 16 VRRQKMAHLQEEGINPFGGRFERSHDFKTLHEEYDE-ASKEELAEAQIEVQIAGRVMTKR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D +G +Q+Y ++ + + + K D+GD LGV G + +T GELSV
Sbjct: 75 GKGKAGFAHLQDRTGQLQIYVRQDSVGEENYGLFKQ-ADLGDFLGVKGHLMKTNTGELSV 133
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+K+L PLP+KYHGLT+V++RYRQRY+D+IS E D F R++I+ IR +
Sbjct: 134 KATHLTVLSKALRPLPEKYHGLTNVEQRYRQRYLDLISNRESFDKFIMRSEIIKSIRDYL 193
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
G++EVETPVL AGGA ARPF+T+HN+L + YLRIA ELHLKR++IGG EK+YEI
Sbjct: 194 NGQGYLEVETPVLHNQAGGASARPFITHHNALDMEFYLRIALELHLKRLIIGGMEKVYEI 253
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E+Y AY+DY+ +M +TE I + A V GK I Y EI
Sbjct: 254 GRVFRNEGIDTTHNPEFTLLEVYTAYTDYEDVMELTEGIFKNAAQTVLGKTVIPYGEYEI 313
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSPS 422
L PWRR M + V EATG+DF + D + RA+G G+E +E + S
Sbjct: 314 DLGTPWRRLHMVDAVSEATGVDFWQQMTDEEA------RAIGKEHGIE------VEDTMS 361
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G ++N++FE VE L+QPTFV +P+EISPLAK + T+RFELFI G E ANA+
Sbjct: 362 YGQVINDLFEKYVEETLIQPTFVYGHPVEISPLAKKNEEDPRFTDRFELFIAGHEYANAY 421
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES-DDHSYEVTLDDDFVTALE 541
SEL DP+DQR+R E AQ+ +E+ DD ++ V D+D++ A+E
Sbjct: 422 SELNDPIDQRSRFE-------------------AQDLARENGDDEAHGV--DEDYLEAME 460
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 461 YGMPPTGGLGIGIDRLVMLLTNSQSIRDVLLFPAMR 496
>gi|357635079|ref|ZP_09132957.1| Lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357583633|gb|EHJ48966.1| Lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 529
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/518 (46%), Positives = 335/518 (64%), Gaps = 44/518 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV------AGR 119
RI K +L G+ Y +++ + A G E E +V AGR
Sbjct: 43 RIAKAVQLLDDGVPLYPNDFEKGEDIGPV-------AAGHEPLDEEALAAVPTVFRLAGR 95
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
+V+ R+FGK+AF T++D SG IQ++ E+++L ++ + K F DIGDI+GVSG + RT+
Sbjct: 96 IVSLRSFGKVAFFTIQDASGRIQVFAERDKLGTEAYQTFKKF-DIGDIVGVSGRLFRTKT 154
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GEL++ ++ +LTKS+ PLP+K+HGL DV+ RYRQRYVD+I P+ ++F+ R IV E
Sbjct: 155 GELTLHADTVRLLTKSMRPLPEKFHGLKDVETRYRQRYVDLIVTPKAVEIFKARTTIVRE 214
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
+R +++ GF+EVETP++Q GGA A+PFVT+HN+L L+LRIA EL+LKR+L+GGFE
Sbjct: 215 LRAFLDTAGFMEVETPMMQAIPGGATAKPFVTHHNALDMGLFLRIAPELYLKRLLVGGFE 274
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR FRNEG+STRHNPEFT E Y AY+ Y +M++TE + +H A AV G + Y
Sbjct: 275 KVYEVGRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFSHLARAVTGGDVVTY 334
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG EI L W R H+ +++ GI ++ D AK L K +
Sbjct: 335 QGQEINLGLGWTRLAFHDSLEKVGGIS-PDVYRDFDAAK---------ALVEKSGEKVLK 384
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+G + ++F+I VEPKL+QP F+ YP EISPL++ + +T+RFELFICGREMA
Sbjct: 385 GEKLGKVQAKLFDIFVEPKLLQPHFIYHYPTEISPLSRRNSEDPTITDRFELFICGREMA 444
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP+DQR R E+QVR EK A DD ++ +DDD+V A
Sbjct: 445 NAFSELNDPVDQRLRFEDQVR---EKEAG---------------DDEAHR--MDDDYVRA 484
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPPA+G G+GIDRLVMLLT+ ASIR+VI FP+L+
Sbjct: 485 LEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPLLR 522
>gi|410462540|ref|ZP_11316113.1| lysyl-tRNA synthetase (class II) [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409984346|gb|EKO40662.1| lysyl-tRNA synthetase (class II) [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 529
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/513 (47%), Positives = 334/513 (65%), Gaps = 34/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE-NDHVSVAGRVVARR 124
RI K +L G+ Y + + + E + LA EE+ +E +AGR+V+ R
Sbjct: 43 RIAKAVQLLDDGVALYPNDFAKGDDIGPVAEAHEPLA--EEALAELGRTFRLAGRIVSLR 100
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+FGK+AF T++D SG IQ++ E+E L + + K F DIGDI+GV+G + RT+ GEL++
Sbjct: 101 SFGKVAFFTIQDASGRIQVFAERETLGQEAYTVFKKF-DIGDIVGVTGRLFRTKTGELTL 159
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
++ ++TKS+ PLP+KYHGL DV+ RYRQRYVD+I P ++F+ R I+ E+R +
Sbjct: 160 HADTLALVTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPRSVEIFKARTTIIRELRAFL 219
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP++Q GGA ARPFVT+HN+L LY+RIA EL+LKR+L+GGFEK+YE+
Sbjct: 220 DGSGFMEVETPMMQAIPGGATARPFVTHHNALDMGLYMRIAPELYLKRLLVGGFEKVYEV 279
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+STRHNPEFT E Y AY+ Y +M++TE++ A AV G + YQG EI
Sbjct: 280 GRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTEQLFARLAKAVTGSEAVSYQGQEI 339
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R + H +++ GID E+ D AK L K + +G
Sbjct: 340 NLAPGWARLSFHESIEKVGGID-PEIIRDYDKAK---------ALVEKSGEKVLKGEKLG 389
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+ ++F+I VEPKL+QP F+ YP EISPL++ + + +T+RFELFI GREMANAFSE
Sbjct: 390 KVQAKLFDIFVEPKLIQPHFIYHYPTEISPLSRRNTENPEITDRFELFIAGREMANAFSE 449
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QVR EK A DD ++ +D+D+V ALEYGM
Sbjct: 450 LNDPVDQRQRFEDQVR---EKEAG---------------DDEAHR--MDEDYVRALEYGM 489
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+ ASIR+VI FP+L+
Sbjct: 490 PPAAGEGIGIDRLVMLLTDQASIREVILFPLLR 522
>gi|372324231|ref|ZP_09518820.1| Lysyl-tRNA synthetase (class II) [Oenococcus kitaharae DSM 17330]
gi|366983039|gb|EHN58438.1| Lysyl-tRNA synthetase (class II) [Oenococcus kitaharae DSM 17330]
Length = 496
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/514 (45%), Positives = 345/514 (67%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R++K++ L+ G++P+ ++++R A + + +GE HV VAGR++A+
Sbjct: 15 VRLQKMQALKDDLGVDPFGHRFERDTYAKDIHN-FADDKSGESLYEAKKHVIVAGRMMAK 73
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F +RD SGT+Q+Y ++ L + + L+ D+GDILG SG + +T+ GE +
Sbjct: 74 RGAGKVIFADIRDVSGTVQIYARRDDL-GENYSLLRR-ADLGDILGFSGQVMKTDAGETT 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
VLV+ L+K+L PLPDK+HGLTD+D RYR+RY+D+I+ P+ D+F KR+KIV IR
Sbjct: 132 VLVDKITWLSKALRPLPDKFHGLTDIDTRYRKRYLDLIANPDSFDIFIKRSKIVKAIRDY 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S+GF+EVETP+LQ +AGGA ARPFVT+HN+L D+YLRIATEL+LKR+++GG E++YE
Sbjct: 192 MDSVGFIEVETPILQNSAGGAAARPFVTHHNALDIDMYLRIATELYLKRLIVGGMERVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGRIFRNEG+ T HNPEFTT+E Y AY D +M TE I+ A AVN I Y+ +
Sbjct: 252 IGRIFRNEGMDTTHNPEFTTLESYAAYWDLSDVMIETENIIRAAAQAVNEDGLITYKDHQ 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ + +P+ +++M L+KE TGIDF++ DL A R L D +N K+ ES V
Sbjct: 312 VDITKPFAKKSMTALIKEKTGIDFDQ-KMDLDDA-----RQLAD--DNHVKY--ESFWGV 361
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++++E F+ VE L++PTFV +P+E+SPLAK + +RFEL+I G E ANAF+
Sbjct: 362 GHIISEFFDTFVEKTLIEPTFVYHFPLEVSPLAKKEDDNPDFVQRFELYIAGNEYANAFT 421
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q SE+ + ++ + ++D+D++ ALE+G
Sbjct: 422 ELNDPIDQRQRFEAQ-----------ASERENGNDEAE---------SIDEDYIEALEHG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
M P G+G+GIDRLVMLLT+ ASIRDV+ FP ++
Sbjct: 462 MAPTGGLGIGIDRLVMLLTDQASIRDVLLFPTMR 495
>gi|51891663|ref|YP_074354.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|51855352|dbj|BAD39510.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 495
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/527 (47%), Positives = 337/527 (63%), Gaps = 42/527 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S E +R R K+ LR G++P+ ++ L+ Y A+ EE ++ V
Sbjct: 3 SREEQLREARRAKMRTLREAGVDPFGTRFGDRRLMGDLRRQYGE-ASAEELDAARIPARV 61
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLY------CEKERLLSDQFDQLKVFVDIGDILGV 170
AGRVV R+ GK+ F L+D SG +Q+Y E+ERL+ + +D+GDI+G
Sbjct: 62 AGRVVTVRSHGKIGFAHLQDGSGRLQIYLRLPELSERERLVWEH-------LDLGDIVGA 114
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + RT GEL+V V S +LTK+L PLPDK+ GL DV+ RYR+R++D++ PE VF
Sbjct: 115 EGVLMRTRTGELTVKVESLTMLTKALRPLPDKHAGLRDVELRYRERHLDLLVNPESRAVF 174
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R++IV+ +R+T++ LGF+EVETPVL AGGA ARPF+TYHN+L R L LRIATELHL
Sbjct: 175 EARSRIVASLRRTLDELGFIEVETPVLVPLAGGAAARPFLTYHNALDRQLSLRIATELHL 234
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG E++YEIGR+FRNEGLSTRHNPEFT++E Y+AY+DY+ MM++TE +V + A A
Sbjct: 235 KRLVVGGMERVYEIGRVFRNEGLSTRHNPEFTSLEAYQAYADYRDMMDLTERLVQNAARA 294
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
VNG L + EI L P+RR TM VKEATGID LG+ E
Sbjct: 295 VNGSL----RAGEIDLTGPFRRITMAEAVKEATGIDVMALGSS---GDERRDAEAVRAAA 347
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ +E++ + G LL E+FE E +LVQPTFVL +P+E SPLA+ R LTERFE
Sbjct: 348 EAAGYEVEAA-TWGGLLAELFERYAEDRLVQPTFVLGHPVETSPLARRDPRDPRLTERFE 406
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
L++ GRE+ANAFSEL DP DQR R E Q+ AQ + + + H
Sbjct: 407 LYVQGREIANAFSELNDPEDQRRRFEAQL----------------AQRQAGDEEAHP--- 447
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE G+PP G+G+G+DRLVMLLT + SIRDVI FP ++
Sbjct: 448 -MDEDFLAALEVGLPPTGGLGIGVDRLVMLLTGAPSIRDVILFPTMR 493
>gi|239908486|ref|YP_002955228.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|239798353|dbj|BAH77342.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 510
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/513 (47%), Positives = 337/513 (65%), Gaps = 34/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE-NDHVSVAGRVVARR 124
RI K +L G+ Y + + + E + L EE+ +E +AGR+V+ R
Sbjct: 24 RIAKAVQLLDDGVPLYPNDFAKGDDIGPVAEAHEPLT--EEALAELGRTFRLAGRIVSLR 81
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+FGK+AF T++D SG IQ++ E+E L + + K F DIGDI+GV+G + RT+ GEL++
Sbjct: 82 SFGKVAFFTIQDASGRIQVFAERETLGQEAYTVFKKF-DIGDIVGVTGRLFRTKTGELTL 140
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
++ ++TKS+ PLP+KYHGL DV+ RYRQRYVD+I P ++F+ R I+ E+R +
Sbjct: 141 HADTLSLVTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPRSVEIFKARTTIIRELRAFL 200
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETP++Q GGA ARPFVT+HN+L LY+RIA EL+LKR+L+GGFEK+YE+
Sbjct: 201 DSSGFMEVETPMMQAIPGGATARPFVTHHNALDMGLYMRIAPELYLKRLLVGGFEKVYEV 260
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+STRHNPEFT E Y AY+ Y +M++TE + A AV G + YQG EI
Sbjct: 261 GRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFARLAKAVTGSEAVSYQGQEI 320
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R + H +++ GID E+ D AK ++ G+ + DK +G
Sbjct: 321 NLAPGWARLSFHESIEKVGGID-PEIIRDYDKAKSLVEKS-GEKVLKGDK--------LG 370
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+ ++F+I VEPKL+QP F+ YP EISPL++ + + +T+RFELFI GREMANAFSE
Sbjct: 371 KVQAKLFDIFVEPKLIQPHFIYHYPTEISPLSRRNTENPEITDRFELFIAGREMANAFSE 430
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QVR EK A DD ++ +D+D+V ALEYGM
Sbjct: 431 LNDPVDQRQRFEDQVR---EKEAG---------------DDEAHR--MDEDYVRALEYGM 470
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+ ASIR+VI FP+L+
Sbjct: 471 PPAAGEGIGIDRLVMLLTDQASIREVILFPLLR 503
>gi|302037376|ref|YP_003797698.1| lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300605440|emb|CBK41773.1| Lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 493
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/521 (46%), Positives = 332/521 (63%), Gaps = 44/521 (8%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS--ENDHVS--VAG 118
R RIKK++ LR G+ PY +++ A QL ++ GE++ E + +S +AG
Sbjct: 8 RQQRIKKLDHLRQLGVAPYGTRFEVKDRAGQLTRLH-----GEKTKEVLEQEQISCTIAG 62
Query: 119 RVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTE 178
R+V R FGK AF L+D S +Q+Y +K+ L +Q Q+ +D+GD +GV+G + RT+
Sbjct: 63 RIVGLRRFGKAAFAVLQDGSDRLQVYLKKD-TLGEQAHQISEGLDLGDWIGVTGVLFRTK 121
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
E +V V L+K+L PLP+K+HGLTDV+ RYRQRYVD+I+ P+V +F R++IVS
Sbjct: 122 TNEFTVEVKVLTFLSKALRPLPEKWHGLTDVETRYRQRYVDLIANPQVHQIFALRSRIVS 181
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR + GF+EVETP++ GGA A+PFVT+HN+LG +LYLRIA EL+LKR+++GGF
Sbjct: 182 GIRAFLIERGFLEVETPMMHPIPGGAAAKPFVTHHNALGAELYLRIAPELYLKRLIVGGF 241
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
+++EI R FRNEG+ST HNPEFT +E Y +Y+DY ++ +TEE+ A + G TID
Sbjct: 242 PRVFEINRNFRNEGISTIHNPEFTMLEFYVSYADYHDLIVLTEELFGRLAQDILGTTTID 301
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG I L PWRR + H + E + + L N + L + +E
Sbjct: 302 YQGTHINLGSPWRRWSYHQSILEVNSLPPSVLTNR------------DEALAAAQRLGVE 349
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
SP S+ N+LNE+FE VEP+L QPTF+ DYPIEISPLA+ LT+RFEL+I GR
Sbjct: 350 VSPKESLVNILNEIFEETVEPRLQQPTFITDYPIEISPLARRKDSDPSLTDRFELYIAGR 409
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E+ANAFSEL DPLDQR R E Q +H D+ ++ V D+DF
Sbjct: 410 EIANAFSELNDPLDQRERFEAQAAKH------------------AAGDEEAHRV--DEDF 449
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALEYGMPP +G G+GIDRLVML TN +SIRDV+ FP L+
Sbjct: 450 LRALEYGMPPTAGEGIGIDRLVMLFTNQSSIRDVVLFPQLR 490
>gi|294102359|ref|YP_003554217.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293617339|gb|ADE57493.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 506
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 338/514 (65%), Gaps = 35/514 (6%)
Query: 66 RIKKVEELRSK-GLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
R +K+ LR + G +P+ +W+R+ N +++ + HL E E+ +SVAGRV+
Sbjct: 23 RKEKLARLREEEGYDPFLIERWERSDLLNDVRQRFDHLEIDEAD--EDAILSVAGRVMTL 80
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F L+D++ T+QLY + + + +D K +VD GD +GV G RT +GEL+
Sbjct: 81 RKHGKAMFANLQDETDTMQLYFQLNAMGEEAYDFAKKWVDNGDFVGVVGIPFRTRRGELT 140
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+LV +L+K L PLP+K+HGL D + RYRQRY+D++ +V D FRKR+ I++ +RKT
Sbjct: 141 ILVKESTLLSKVLRPLPEKWHGLKDTEVRYRQRYLDLMVNTDVRDTFRKRSDIIASMRKT 200
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ G +EVETP+L AGGA ARPF TYHN+L ++YLRIATEL+LKR+++G F +++E
Sbjct: 201 LIDHGTLEVETPILSFLAGGANARPFQTYHNALDANMYLRIATELYLKRLVVGMFGRVFE 260
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IG+ FRNEG+ T HNPEFT +E+Y AY+DY MM++TEE+V + ALAV+G L ++YQG+E
Sbjct: 261 IGKNFRNEGIDTMHNPEFTLMEVYWAYADYSDMMDLTEELVRNAALAVDG-LVVNYQGIE 319
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ +P+RR +M NLVKE TGIDF + D + K + N+ ++ S S
Sbjct: 320 LDFSKPFRRVSMLNLVKEYTGIDFKTIKTDEEARK----------IANEKGVELKGSESR 369
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
+LNEVFE VE KLVQPTFV+ +P EISPLAK T RFELFICG E+ANA+S
Sbjct: 370 FAVLNEVFEAYVEDKLVQPTFVIGHPTEISPLAKRDPEDPDYTHRFELFICGSEVANAYS 429
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DPLDQR R +Q+R+ KE+ D V D+DF+ A+E G
Sbjct: 430 ELNDPLDQRERFLDQLRK-------------------KEAGDEEAHV-FDEDFINAIECG 469
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+GIDRLVM LT+S SIRDVI FP ++
Sbjct: 470 LPPTGGLGIGIDRLVMFLTDSRSIRDVILFPAMR 503
>gi|153940179|ref|YP_001392873.1| lysyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
gi|168180988|ref|ZP_02615652.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|170757532|ref|YP_001783159.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|384463833|ref|YP_005676428.1| lysine--tRNA ligase [Clostridium botulinum F str. 230613]
gi|429244695|ref|ZP_19208129.1| lysyl-tRNA ligase [Clostridium botulinum CFSAN001628]
gi|189082955|sp|A7GJB3.1|SYK_CLOBL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|229559856|sp|B1IGJ2.1|SYK_CLOBK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|152936075|gb|ABS41573.1| lysine--tRNA ligase [Clostridium botulinum F str. Langeland]
gi|169122744|gb|ACA46580.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|182668060|gb|EDT80039.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|295320850|gb|ADG01228.1| lysine--tRNA ligase [Clostridium botulinum F str. 230613]
gi|428758269|gb|EKX80707.1| lysyl-tRNA ligase [Clostridium botulinum CFSAN001628]
Length = 504
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 337/518 (65%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ ++++ Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G ++Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + ND++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNIIKNDIEARTIAKEKH-------IEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|379705666|ref|YP_005204125.1| lysyl-tRNA synthetase [Streptococcus infantarius subsp. infantarius
CJ18]
gi|374682365|gb|AEZ62654.1| lysyl-tRNA synthetase [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 496
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/514 (45%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTK-EELHEINKTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKK-ADLGDFLGIEGEIMRTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPFVT+HN+ D+ LRIA ELHLKR+++GG EK+YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFVTHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFT IE+YEAY+D++ +M+ITE I+ + + AVNG I YQG EI
Sbjct: 253 GRVFRNEGMDATHNPEFTMIELYEAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF KE TL + + K+ V + SVG
Sbjct: 313 AIDQPFKRIHMVDAIKEVTGVDF---------WKEMTLEEAQELAKEKNVPVEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E NA+SE
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDTRFTDRFELFIMTKEYGNAYSE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + V D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEATGV--DYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRD + FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDALLFPTMK 496
>gi|404372916|ref|ZP_10978197.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
gi|226914291|gb|EEH99492.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
Length = 501
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/522 (46%), Positives = 339/522 (64%), Gaps = 45/522 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
ALR +K+ EL+++G +P+ YK +RTH + +++ + +L E V+VAGR+++
Sbjct: 20 ALRREKLVELQNQGKDPFDVYKVERTHMSEDVKKDFENL--------EGTIVTVAGRIMS 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F ++D G IQL+ + + + + K + D+GD + +G + +T+ GE+
Sbjct: 72 KRGQGKVVFSDVQDRDGKIQLFIKIDEVGEEALKSYKTY-DLGDWVVATGEVFKTKTGEV 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV V +F ++ KSL PLP+K+HGL D D RYRQR VDMIS PEV F KRA I+ +R+
Sbjct: 131 SVKVKNFELICKSLKPLPEKWHGLKDPDLRYRQREVDMISNPEVKTNFMKRATILKGVRE 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR ++ G EK+Y
Sbjct: 191 FLDNRGFIEVETPMLAPIAGGASARPFITHHNTLDIDMYLRIAPELYLKRCIVAGLEKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
++GR FRNEG+S RHNPEFT IE+YEA+SDY MM I E ++ VNG ++YQG
Sbjct: 251 DMGRTFRNEGMSVRHNPEFTMIELYEAFSDYNDMMEIAENMIASVCEKVNGTTKVNYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIES 419
EI PWRR TM + VKE TGIDFNE+ +D + +AKE L + K V +
Sbjct: 311 EIDFAPPWRRITMVDAVKEHTGIDFNEIKSDEEAQAIAKEKNLE-----FKKNIKHVTK- 364
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
G +LN +FE E ++QPTF+ DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 365 ----GEVLNVLFEEYAEQHMIQPTFICDYPVEISPLTKKKRGNDKFTERFEGFVFGREIC 420
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NA+SEL DP+ QR R + QEK +E DD +Y +D++F++
Sbjct: 421 NAYSELNDPIVQRERF-------------------NQQEKERELGDDEAY--MIDEEFMS 459
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
ALE GMPP G+G+GIDR++M LT+SASIRDVI FP +K Q+
Sbjct: 460 ALETGMPPTGGLGIGIDRVIMFLTDSASIRDVIMFPTMKPQK 501
>gi|336417722|ref|ZP_08598007.1| lysine--tRNA ligase [Fusobacterium sp. 11_3_2]
gi|336164669|gb|EGN67571.1| lysine--tRNA ligase [Fusobacterium sp. 11_3_2]
Length = 493
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/523 (45%), Positives = 342/523 (65%), Gaps = 44/523 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
+RE + A R KK+EEL S G++P+ K+D+ N + ++ +H + EN A
Sbjct: 9 EREPLIAERWKKIEELESYGIKPFGRKYDKQ---NMIGDVLKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNVGDIVGIEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +L K++ LP+KYHGLTDV+ RYR+RY+D+I PEV D+F KR +I+
Sbjct: 120 HTEELTLRVKSISLLAKNVRSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRDIFIKRTEII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
EIRK ++ GF+EVETP++ GGA ARPF+T+HN+L DLYLRIA EL+LKR+++GG
Sbjct: 180 KEIRKYLDDRGFLEVETPMMHQILGGAAARPFITHHNALNLDLYLRIAVELYLKRLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
F+K+YE+G+ FRNEG+S RHNPEFT IE+Y+A++D+ MM+I E +++ +NG I
Sbjct: 240 FDKVYEMGKDFRNEGISVRHNPEFTMIELYQAHADFNDMMDIAEGMISTICEKINGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
Y GV++ L + ++R M +++K+ TG+DF KE T + + ++ +
Sbjct: 300 VYDGVQLSL-KNFKRVHMVDMIKDVTGVDF---------WKEMTFE---EAKQLAKEYHV 346
Query: 418 ESSP---SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
E +P SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI
Sbjct: 347 EIAPHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAF+EL DP DQR R E QV + A +E+++ +D+
Sbjct: 407 KREYANAFTELNDPADQRGRFEAQVEE-----ALRGNEEATP--------------VIDE 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+V ALEYGMPP GMG+GIDRLVMLLT S SIRDVI FP +K
Sbjct: 448 DYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFPQMK 490
>gi|449964943|ref|ZP_21811591.1| lysyl-tRNA synthetase [Streptococcus mutans 15VF2]
gi|449172041|gb|EMB74683.1| lysyl-tRNA synthetase [Streptococcus mutans 15VF2]
Length = 496
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/526 (45%), Positives = 338/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ V++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETVTIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|375086557|ref|ZP_09732963.1| lysine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374564696|gb|EHR35978.1| lysine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 496
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/513 (46%), Positives = 335/513 (65%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K++ KG+EP+ +D TH A +L + + L GEE+ V VAGR++A R
Sbjct: 19 VRRDKMQAFIDKGIEPFGRSYDVTHHAQELLDQFETL--GEETV-----VRVAGRLMAVR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F + D SG IQ Y + L +++ + K+ +DIGDI+GV G++ +T +GE+++
Sbjct: 72 GHGKASFTVVSDLSGKIQAYFRLDNLGEEKYGEFKL-LDIGDIIGVEGTLFKTHRGEITI 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ F IL KSL PLP+K+HGL DV+ RYRQRY+D+I P+V F R KI+ IR +
Sbjct: 131 KVSDFSILAKSLRPLPEKFHGLKDVETRYRQRYLDLIVNPDVRQTFITRTKIIKSIRNYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S F+EVETPVL AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++GGFE++YEI
Sbjct: 191 DSRNFLEVETPVLSPIAGGANARPFITHHNALDIDMYLRIATELYLKRLVVGGFERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ RHNPEFT+IE+Y+AY+D+ +M++ E I+ A+ G I Y+G EI
Sbjct: 251 GRIFRNEGIDVRHNPEFTSIEVYQAYADFNELMDLAEGIIKQAAMDACGTTKITYEGTEI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L +RR TM+++V E TG DF+ KV +A+ L E S+G
Sbjct: 311 DLSN-FRRVTMNDIVLETTGKDFS------KVQTLEEAQAIAQEL----AVPCEGKHSIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+L EVF+ VE L+QPT V YP E+SPL+K ++ + T+RFE+FI GRE+ANAFSE
Sbjct: 360 EILYEVFDEKVESTLIQPTIVTQYPTEVSPLSKRNKENPAFTDRFEMFIYGRELANAFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R +Q Q+ + DD ++ +D D++TALEYG+
Sbjct: 420 LNDPIDQEQRFIDQ------------------QKAREGGDDEAH--MMDHDYITALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVM LT+S+SIRDV+ FP +K
Sbjct: 460 PPTCGLGIGIDRLVMFLTDSSSIRDVLLFPTMK 492
>gi|392330960|ref|ZP_10275575.1| lysyl-tRNA synthetase [Streptococcus canis FSL Z3-227]
gi|391418639|gb|EIQ81451.1| lysyl-tRNA synthetase [Streptococcus canis FSL Z3-227]
Length = 497
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L KG++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMMALAEKGIDPFGKRFDRTANSAELKEKYAD-KTKEELHDLNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D +D K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYDIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E + F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFERFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|323340117|ref|ZP_08080382.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
gi|417974660|ref|ZP_12615467.1| lysyl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
gi|323092494|gb|EFZ35101.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
gi|346329004|gb|EGX97316.1| lysyl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
Length = 497
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 334/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR G++P+ ++++R +L E Y + + EE N ++ V++AGR+VA+R
Sbjct: 13 VRREKMQELRDAGIDPFGHRFERDSMNQELHEKYGDM-DKEELNDKDIIVTIAGRMVAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G +QLY K+ + D + K D+GD LG++G + +T+ GEL+V
Sbjct: 72 GKGKVGFADLQDKTGRMQLYIRKDEVGEDMYHIFKR-SDLGDFLGITGQVIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLPDKYHGL D+++ YRQRY+D+I+ E D F R++IV+ IR+ +
Sbjct: 131 KATKLTFLSKALRPLPDKYHGLQDIEQIYRQRYLDLITNRESYDRFVNRSRIVTAIRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DKNGFLEVETPVLHTQAGGASARPFITHHNALDIELYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY D++ +M+ TE I A V+ + YQG E+
Sbjct: 251 GRVFRNEGIDTHHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVSDNSIVTYQGTEV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
++P++R M +L+KE TG+DF KE T+ + ++ ES VG
Sbjct: 311 NFDKPFKRAHMVDLIKEYTGVDF---------WKEMTVEE-ARKIADEHGVHYESYWKVG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE E K+V PTFV +P+EISPLAK + T+RFEL+I G E ANAF+E
Sbjct: 361 HIINEFFEEFCEDKIVDPTFVYGHPVEISPLAKKNADDPRFTDRFELYILGGEYANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV E+R A E +D+D++ A+EYGM
Sbjct: 421 LNDPIDQRQRFEAQV----EERKAGNDEAEG----------------IDEDYIEAMEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP +K
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAESIRDVLLFPTMK 493
>gi|168183599|ref|ZP_02618263.1| lysine--tRNA ligase [Clostridium botulinum Bf]
gi|237796980|ref|YP_002864532.1| lysyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|182673242|gb|EDT85203.1| lysine--tRNA ligase [Clostridium botulinum Bf]
gi|229262564|gb|ACQ53597.1| lysine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 504
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/515 (45%), Positives = 334/515 (64%), Gaps = 37/515 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ +++E Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKENYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G ++Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
PWRR TM + VKE G+DFN + ND +E A +E K + + G
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNIIKND----EEARTIAKEKHIEFKKEL---KDCTKG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA+SE
Sbjct: 366 DVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L D + Q+ R +Q+++ + DD +Y +DDDF+T+LE GM
Sbjct: 426 LNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLEVGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
PP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 466 PPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|422758550|ref|ZP_16812312.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411385|gb|EFY02293.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 497
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/514 (46%), Positives = 333/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y E+ + N VAGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFDRTANSAELKEKYSD-KTKEDLHELNKTAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFLGVEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E + F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFNRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + + A T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPKDARFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|268315876|ref|YP_003289595.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
gi|262333410|gb|ACY47207.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
Length = 523
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/521 (46%), Positives = 326/521 (62%), Gaps = 42/521 (8%)
Query: 71 EELRSKGLEPYAYKWDRT-HSANQLQEI--YRHLANGEESNSENDHVSVAGRVVARRAFG 127
++L + G+ PY Y+W+ T H+A LQ RH + E VS+AGR++ RR G
Sbjct: 17 QQLEAMGINPYPYRWEVTAHAAEILQNFDDERHQPREDGPAPEPYEVSIAGRIMTRRIMG 76
Query: 128 KLAFLTLRDDSGTIQLYCEKERLLSDQFDQL-KVFVDIGDILGVSGSMKRTEKGELSVLV 186
K AF L+D++G IQ+Y ++ L +DQ+ K +DIGDI+GV G + RT GE++V
Sbjct: 77 KAAFFDLQDETGRIQVYVRRQDLPEGFYDQVFKKLLDIGDIVGVEGFVFRTRMGEITVHA 136
Query: 187 NSFVILTKSLLPLP-------DKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
+L K+L PLP Y+ +TD + RYRQRY D+I PEV +VFRKRA++++
Sbjct: 137 RRLELLAKALRPLPVVKEQDGKVYNEVTDKEFRYRQRYADLIINPEVREVFRKRARMITT 196
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETP+LQ GGA ARPF+TYHN+L LYLRIA EL+LKR+++GG+E
Sbjct: 197 IRRFLDERGYLEVETPILQPMYGGASARPFITYHNALDMQLYLRIADELYLKRLIVGGYE 256
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
+YEIG+ FRNEGLS HNPEFT +E+Y AY DY MM+ EE++ H A V G + +
Sbjct: 257 GVYEIGKDFRNEGLSRFHNPEFTMLELYVAYKDYYWMMDFVEELLEHVATEVTGSPEVQW 316
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
I RPW R M +KE TG D D E A GLE I+
Sbjct: 317 GEHTISFRRPWPRIPMFEAIKERTGYDLYGKSRD-----ELAEIARKLGLE------IDD 365
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G +++E+F VEP L+QPTF++DYPIE+SPLAK HR GL ERFE+ + G+E+
Sbjct: 366 TMGSGKIIDEIFGEFVEPHLIQPTFIIDYPIELSPLAKRHREKPGLVERFEVIVGGKELC 425
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP DQRAR EEQ R RAA E + +D+DF+ A
Sbjct: 426 NAFSELNDPDDQRARFEEQARL----RAAGDEEA----------------MQIDEDFLRA 465
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LEYGMPP +G+G+GIDRL M+LTN SIRDVI FP+L+ +Q
Sbjct: 466 LEYGMPPTAGLGIGIDRLAMILTNQPSIRDVILFPLLRPEQ 506
>gi|406889374|gb|EKD35580.1| hypothetical protein ACD_75C01854G0002 [uncultured bacterium]
Length = 504
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/524 (45%), Positives = 331/524 (63%), Gaps = 38/524 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S+ + A R +K E L + G+ Y + +SA +L L ++++ E SV
Sbjct: 2 SEESQILAQRKEKAESLAALGVNLYINSFKPANSAKELLPKGEGLGP-QDADPEGAVYSV 60
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++A R FGK AF T+ D SG IQ+Y + + L F+ K + DIGDI+GV G++ +
Sbjct: 61 AGRIMAMRKFGKAAFCTVADTSGQIQIYVKLDVLGEGIFETFKKW-DIGDIVGVEGTLFK 119
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GELS+ V+++KSL PLPDK+HGLTDV+ RYRQRYVD+I PE + FRKR +I
Sbjct: 120 TKVGELSIQAAKIVMISKSLRPLPDKWHGLTDVETRYRQRYVDLIVTPETRETFRKRVEI 179
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+ +R+ + F+EVETP++Q GGA A+PF+T+HN+L DLYLRIA EL+LKR+L+G
Sbjct: 180 IRLVREYLNDQNFMEVETPMMQPIPGGATAKPFMTHHNALNMDLYLRIAPELYLKRLLVG 239
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
GFE+++EI R FRNEGLSTRHNPEFT +E Y+AY+ Y ++ +TE++++ VNG +
Sbjct: 240 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYTDLIALTEQMISSICEKVNGTMK 299
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKV---AKETTLRALGDGLENKD 413
I YQG E+ L PW+ TM + E GID L +D KV AKE ++
Sbjct: 300 ITYQGTEVDLTPPWKVLTMDQALIEVAGIDPAVLADDAKVMALAKEKGIK---------- 349
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
+E G E+FE++VE KL+ PTF+ YP E+SPLA+ + + +T+RFELFI
Sbjct: 350 ---LEEKAGPGKAKTELFELLVEEKLINPTFITSYPTEVSPLARRNDQDPTVTDRFELFI 406
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE+AN FSEL DP+DQ R E+Q+ + DD LD
Sbjct: 407 TGRELANGFSELNDPMDQLGRFEKQIAER--------------------GDDDEIHPELD 446
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D++ ALEYGMP A+G G+GIDRLVMLLT++ SIRDVI FP LK
Sbjct: 447 ADYIRALEYGMPSAAGEGIGIDRLVMLLTDAPSIRDVILFPHLK 490
>gi|71903140|ref|YP_279943.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
gi|71802235|gb|AAX71588.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
Length = 501
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 19 VRREKMTALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 317 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 368 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 428 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|306827767|ref|ZP_07461039.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
gi|383479676|ref|YP_005388570.1| lysyl-tRNA synthetase protein LysS [Streptococcus pyogenes
MGAS15252]
gi|304430085|gb|EFM33122.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
gi|378927666|gb|AFC65872.1| lysyl-tRNA synthetase protein LysS [Streptococcus pyogenes
MGAS15252]
Length = 497
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|422811109|ref|ZP_16859520.1| Lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
gi|378751314|gb|EHY61905.1| Lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
Length = 498
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/515 (46%), Positives = 334/515 (64%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND--HVSVAGRVVA 122
+R +KV+ LR +G++P+ K+ R+ S +EI A+ + E D VSVAGR++
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISP---EEIETKFADKSKEELEEDAIEVSVAGRIMT 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GEL
Sbjct: 72 KRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R
Sbjct: 131 SVKATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRD 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++S GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+Y
Sbjct: 191 YMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG STRHNPEFT +E Y AY DY+ +MN+ E +V+ VNG I Y
Sbjct: 251 EIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNGTTEITYGEY 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
++ L WRR M + VKE G+DF + +D + A+E L K + +
Sbjct: 311 KVDLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHDVPVTEHMT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAF
Sbjct: 361 YGHILNEFFETHVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEY
Sbjct: 421 SELNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+GIDRLVMLLTN+ SIRD++ FP +K
Sbjct: 461 GLPPTGGLGIGIDRLVMLLTNAPSIRDILLFPTMK 495
>gi|19745706|ref|NP_606842.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
gi|139474193|ref|YP_001128909.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
gi|39932219|sp|Q8P1X6.1|SYK_STRP8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|73919758|sp|Q5XD62.2|SYK_STRP6 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166230592|sp|A2RFR7.1|SYK_STRPG RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|19747842|gb|AAL97341.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
gi|134272440|emb|CAM30696.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
Length = 497
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|417752001|ref|ZP_12400245.1| lysine--tRNA ligase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|333772217|gb|EGL49086.1| lysine--tRNA ligase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
Length = 496
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|345302166|ref|YP_004824068.1| Lysyl-tRNA synthetase [Rhodothermus marinus SG0.5JP17-172]
gi|345111399|gb|AEN72231.1| Lysyl-tRNA synthetase [Rhodothermus marinus SG0.5JP17-172]
Length = 523
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/521 (46%), Positives = 326/521 (62%), Gaps = 42/521 (8%)
Query: 71 EELRSKGLEPYAYKWDRT-HSANQLQEI--YRHLANGEESNSENDHVSVAGRVVARRAFG 127
++L + G+ PY Y+W+ T H+A LQ RH + E VS+AGR++ RR G
Sbjct: 17 QQLEAMGINPYPYRWEVTAHAAEILQNFDDERHQPREDGPAPEPYEVSIAGRIMTRRIMG 76
Query: 128 KLAFLTLRDDSGTIQLYCEKERLLSDQFDQL-KVFVDIGDILGVSGSMKRTEKGELSVLV 186
K AF L+D++G IQ+Y ++ L +DQ+ K +DIGDI+GV G + RT GE++V
Sbjct: 77 KAAFFDLQDETGRIQVYVRRQDLPEGFYDQVFKKLLDIGDIVGVEGFVFRTRMGEITVHA 136
Query: 187 NSFVILTKSLLPLP-------DKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
+L K+L PLP Y+ +TD + RYRQRY D+I PEV +VFRKRA++++
Sbjct: 137 RRLELLAKALRPLPVVKEQDGKVYNEVTDKEFRYRQRYADLIINPEVREVFRKRARMITT 196
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETP+LQ GGA ARPF+TYHN+L LYLRIA EL+LKR+++GG+E
Sbjct: 197 IRRFLDERGYLEVETPILQPMYGGASARPFITYHNALDMQLYLRIADELYLKRLIVGGYE 256
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
+YEIG+ FRNEGLS HNPEFT +E+Y AY DY MM+ EE++ H A V G + +
Sbjct: 257 GVYEIGKDFRNEGLSRFHNPEFTMLELYVAYKDYYWMMDFVEELLEHVATEVTGSPEVQW 316
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
I RPW R M +KE TG D D E A GLE I+
Sbjct: 317 GEHTISFRRPWPRIPMFEAIKERTGYDLYGKSRD-----ELAEIARKLGLE------IDD 365
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G +++E+F VEP L+QPTF++DYPIE+SPLAK HR GL ERFE+ + G+E+
Sbjct: 366 TMGSGKIIDEIFGEFVEPHLIQPTFIIDYPIELSPLAKRHREKPGLVERFEVIVGGKELC 425
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP DQRAR EEQ R RAA E + +D+DF+ A
Sbjct: 426 NAFSELNDPDDQRARFEEQARL----RAAGDEEA----------------MQIDEDFLRA 465
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LEYGMPP +G+G+GIDRL M+LTN SIRDVI FP+L+ +Q
Sbjct: 466 LEYGMPPTAGLGIGIDRLAMILTNQPSIRDVILFPLLRPEQ 506
>gi|299536697|ref|ZP_07050007.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
gi|424738898|ref|ZP_18167326.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZB2]
gi|298727811|gb|EFI68376.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
gi|422947206|gb|EKU41604.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZB2]
Length = 497
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/516 (45%), Positives = 342/516 (66%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN-DHVSVAGRVVAR 123
+R +K+ + G +P+ +++RTH + +++E + +E EN V +AGR++ +
Sbjct: 13 VRRQKMTTILENGQDPFGSRFERTHLSTEVREQF--ADQTKEQLEENLQEVIIAGRIMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y ++ + + ++ K D+GDI+GV G++ RT+ GELS
Sbjct: 71 RGKGKAGFAHIQDLNGQIQIYVRQDHVGEEAYELFKQ-ADLGDIVGVRGNVFRTQVGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F LTK+L P+P+K+HGL DV++RYRQRY+D+++ + F R+KI+ IR
Sbjct: 130 VKAEEFTFLTKALRPMPEKFHGLQDVEQRYRQRYLDLMTNEDSKKTFITRSKIIRAIRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++EVETP+L AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LDNAGYLEVETPMLHTIAGGAAARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEA++DYQ +M++TE ++ H A V G ++ Y E
Sbjct: 250 IGRVFRNEGISTRHNPEFTMIELYEAFADYQDIMSLTENLIAHVAQEVLGTTSVQYGEDE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSP 421
I L W+R M + VKEATG+DF + + KE +AL G+E KD
Sbjct: 310 INLAVGWKRVHMVDAVKEATGVDFWQ-----PMTKEQA-QALAKEHGVEVKD------VH 357
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE VE LVQPTFV +P+EISPLAK + T+RFELFI RE ANA
Sbjct: 358 EVGHIINEFFEQKVEETLVQPTFVYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANA 417
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E A ++EK + +D ++E +D+DF+ ALE
Sbjct: 418 FTELNDPIDQRQRFE-----------AQMAEKEAG-------NDEAHE--MDNDFIEALE 457
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRL+MLLTNS SIRDV+ FP ++
Sbjct: 458 YGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMR 493
>gi|317495481|ref|ZP_07953849.1| lysyl-tRNA synthetase [Gemella morbillorum M424]
gi|316914295|gb|EFV35773.1| lysyl-tRNA synthetase [Gemella morbillorum M424]
Length = 499
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E +R GL+P+ K++RTH ++++ + + EE +N V++AGR++ +R
Sbjct: 18 VRREKMEAMREAGLDPFGTKFERTHLSSEIVAEFDKYSK-EELEEKNVSVTIAGRIMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y ++R+ D ++ K +D+GDI+GV+G + +T GELSV
Sbjct: 77 GKGKAGFAHVQDLGGQIQIYVRQDRV-GDSYEYFKT-LDLGDIVGVTGVLFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
++FVILTK+L PLPDK+HGL DV++RYR+RYVD+I E + F R+KI+ +R +
Sbjct: 135 KADNFVILTKALRPLPDKFHGLKDVEERYRRRYVDLIMNEESKETFIMRSKIIQIMRSYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
G++EVETP++ AGGA ARPFVT+HN+L L++RIA EL LKR+++GG EK+YEI
Sbjct: 195 NDRGYLEVETPMMHSVAGGAAARPFVTHHNALDMQLFMRIALELPLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+STRHNPEFT IE+YEAY+D+ +M++TE ++ + ++G I Y EI
Sbjct: 255 GRAFRNEGVSTRHNPEFTMIELYEAYADFNDIMDLTESMIAYICNEIHGTTKIMYGEDEI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + +KE TG+DF KE T L + + VG
Sbjct: 315 DLTPKWRRIHMVDAIKEVTGVDF---------WKEMTDEE-AHTLAKEHNVPVRKDMKVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE LVQPTFV +P+E+SPLAK + T+RFELFI RE ANAFSE
Sbjct: 365 HIINEFFETFVEETLVQPTFVYGHPVEVSPLAKTNPEDTRFTDRFELFIVRREHANAFSE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R A + EK + E++ E +D+DFV +LEYGM
Sbjct: 425 LNDPIDQKERF-----------LAQMDEKDAGNEEVYE---------MDEDFVESLEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 465 PPTGGLGIGIDRLVMLLTNSASIRDVLLFPYMK 497
>gi|335998463|ref|ZP_08564374.1| lysyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
gi|335348318|gb|EGM49824.1| lysyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
Length = 496
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 334/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR G++P+ ++++R +L E Y + + EE N ++ V++AGR+VA+R
Sbjct: 13 VRREKMQELRDAGIDPFGHRFERDSMNQELHEKYGDM-DKEELNDKDIIVTIAGRMVAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G +QLY K+ + D + K D+GD LG++G + +T+ GEL+V
Sbjct: 72 GKGKVGFADLQDKTGRMQLYIRKDEVGEDMYHIFKR-SDLGDFLGITGQVIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLPDKYHGL D+++ YRQRY+D+I+ E D F R++IV+ IR+ +
Sbjct: 131 KATKLTFLSKALRPLPDKYHGLQDIEQIYRQRYLDLITNRESYDRFVNRSRIVTAIRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DENGFLEVETPVLHTQAGGASARPFITHHNALDIELYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY D++ +M+ TE I A V+ + YQG E+
Sbjct: 251 GRVFRNEGIDTHHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVSDNSIVTYQGTEV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
++P++R M +L+KE TG+DF KE T+ + ++ ES VG
Sbjct: 311 NFDKPFKRAHMVDLIKEYTGVDF---------WKEMTVEE-ARKIADEHGVHYESYWKVG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE E K+V PTFV +P+EISPLAK + T+RFEL+I G E ANAF+E
Sbjct: 361 HIINEFFEEFCEDKIVDPTFVYGHPVEISPLAKKNADDPRFTDRFELYILGGEYANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV E+R A E +D+D++ A+EYGM
Sbjct: 421 LNDPIDQRQRFEAQV----EERKAGNDEAEG----------------IDEDYIEAMEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP +K
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAESIRDVLLFPTMK 493
>gi|209559054|ref|YP_002285526.1| lysyl-tRNA synthetase [Streptococcus pyogenes NZ131]
gi|417857296|ref|ZP_12502355.1| lysyl-tRNA ligase [Streptococcus pyogenes HKU QMH11M0907901]
gi|417928085|ref|ZP_12571473.1| lysine--tRNA ligase [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
gi|238064862|sp|B5XKG9.1|SYK_STRPZ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|209540255|gb|ACI60831.1| Lysyl-tRNA synthetase (class II) [Streptococcus pyogenes NZ131]
gi|340765959|gb|EGR88485.1| lysine--tRNA ligase [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
gi|387934251|gb|EIK42364.1| lysyl-tRNA ligase [Streptococcus pyogenes HKU QMH11M0907901]
Length = 497
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|406668969|ref|ZP_11076258.1| lysyl-tRNA synthetase [Facklamia ignava CCUG 37419]
gi|405584866|gb|EKB58732.1| lysyl-tRNA synthetase [Facklamia ignava CCUG 37419]
Length = 645
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/524 (46%), Positives = 342/524 (65%), Gaps = 39/524 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
+D+ VR R K +E S+ + P+ + RTH + ++ E Y HL+ EE E VSV
Sbjct: 6 NDQLQVR--RDKMMEMFESETVHPFDAGFYRTHLSQEVTEQYDHLSK-EELAEETIAVSV 62
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++ +R GK F ++D SG IQ+Y ++ + + D+GDI+GV+G++ R
Sbjct: 63 AGRLMTKRGKGKAGFAHVQDMSGQIQIYVRQDEVGEAAYHWYDA-ADLGDIVGVAGTLFR 121
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T GEL+V F+ LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E F R+KI
Sbjct: 122 TNTGELTVRAKEFIPLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNQESRTRFINRSKI 181
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
++ IR+ ++ G++EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR++IG
Sbjct: 182 ITAIRRFLDQEGYMEVETPVLHNLAGGANARPFITHHNALDMELYLRIALELHLKRLVIG 241
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
GFEK+YEIGR+FRNEG+ T HNPEFT IE+Y AYS Y +M++TE+I+ + A A++
Sbjct: 242 GFEKVYEIGRVFRNEGIDTTHNPEFTMIEVYTAYSIYTDVMDLTEKIIKNAAHAIHPTAM 301
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKD 413
++Y GV+I LE + R M +++KE G+DF +AKE + LE+ D
Sbjct: 302 VEYDGVQIDLESDFNRVHMVDMIKETVGVDFWPEMSFEEAKALAKEHHV-----PLEDSD 356
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
+VG+++N+ FE E L+QPTFV +P+EISPLA+ ++ T+RFELFI
Sbjct: 357 T-------TVGHVINQFFEEKCEEHLIQPTFVYGHPVEISPLARKNQEDPRFTDRFELFI 409
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
G E ANAF+ELTDP+DQR R E Q+ + + + +D ++ V D
Sbjct: 410 AGHEYANAFTELTDPIDQRERFEAQMAEKD------------------QGNDEAHPV--D 449
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALEYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 450 NDFLEALEYGMPPTGGLGIGIDRLVMLLTDSQSIRDVLLFPTMK 493
>gi|50913862|ref|YP_059834.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
gi|50902936|gb|AAT86651.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
Length = 501
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 19 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 317 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 368 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 428 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|386316592|ref|YP_006012756.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323126879|gb|ADX24176.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 500
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 19 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 317 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 368 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 428 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|449935873|ref|ZP_21803655.1| lysyl-tRNA synthetase [Streptococcus mutans 2ST1]
gi|450153139|ref|ZP_21877064.1| lysyl-tRNA synthetase [Streptococcus mutans 21]
gi|449166009|gb|EMB68968.1| lysyl-tRNA synthetase [Streptococcus mutans 2ST1]
gi|449239378|gb|EMC38103.1| lysyl-tRNA synthetase [Streptococcus mutans 21]
Length = 496
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 338/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A+AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAAIAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|424835878|ref|ZP_18260537.1| lysyl-tRNA synthetase [Clostridium sporogenes PA 3679]
gi|365977748|gb|EHN13846.1| lysyl-tRNA synthetase [Clostridium sporogenes PA 3679]
Length = 504
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 336/518 (64%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL++ G +P+ YK +RTH++ +++E Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQANGKDPFDVYKIERTHTSKEVKENYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + V G + Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYICEKVLGTTKVQYEGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + +D++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNSIKDDIEARTIAKEKH-------VEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|339634746|ref|YP_004726387.1| lysyl-tRNA synthetase [Weissella koreensis KACC 15510]
gi|420160732|ref|ZP_14667504.1| lysyl-tRNA synthetase [Weissella koreensis KCTC 3621]
gi|338854542|gb|AEJ23708.1| lysyl-tRNA synthetase [Weissella koreensis KACC 15510]
gi|394746024|gb|EJF34829.1| lysyl-tRNA synthetase [Weissella koreensis KCTC 3621]
Length = 494
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/531 (43%), Positives = 348/531 (65%), Gaps = 41/531 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS 109
++ S +D+ VR +K+ EL+ +G++P+ +++ +H A++L + Y + + +E
Sbjct: 2 AAQELSLNDQMVVRR---EKMAELKEQGIDPFGQRFEASHHASELHQAYDDV-DIDELEE 57
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILG 169
+ V +AGR++ +R GK+ F ++D +G++Q++ +K + D ++ LK D+GDILG
Sbjct: 58 KQISVKIAGRMMTKRRSGKITFANIKDRTGSVQIFVQKPIVGEDAYELLKK-SDLGDILG 116
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
SG+M +T+ GELSV V + LTK+L PLPDK+HGL D++ RYR+RY+D+I+ +
Sbjct: 117 FSGTMMKTKAGELSVNVQTITHLTKALRPLPDKFHGLNDIETRYRKRYLDLIANEDSFSR 176
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
F+KR++I+S IR+ ++ GF+EVETP+LQ +AGGA ARPF+T+HN+L D+YLRIA ELH
Sbjct: 177 FQKRSEIISAIRRYMDGDGFIEVETPILQNSAGGASARPFITHHNALDIDMYLRIALELH 236
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GG EK+YEIGR+FRNEG+ +HNPEFTT+E Y AY D++ +M E I+
Sbjct: 237 LKRLIVGGMEKVYEIGRVFRNEGMDPKHNPEFTTMETYAAYWDFEDVMVEAENIIKAATK 296
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALG 406
V+ L I YQG ++ L +P+ R+ M +L+KE TGIDF + L K+A + ++
Sbjct: 297 VVSDDLKITYQGTQLDLAKPFARKHMVDLIKEQTGIDFWQPMSLDEAKKLAVDNDIK--- 353
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
+ES VG+++NE FE VE L+QPTFV +P+E+SPLAK + T
Sbjct: 354 ----------VESFWGVGHIINEFFEKFVEKTLIQPTFVYGHPVEVSPLAKKNADDERFT 403
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
+RFE+FI G E NAF+EL DP+DQR R E Q A E K +D+
Sbjct: 404 DRFEIFIMGAEYGNAFTELNDPIDQRERFEAQ-----------------AAEAAKGNDEA 446
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGM P G+G+GIDRLVMLLT++ +IRDV+ FP ++
Sbjct: 447 E---GIDEDFIEALEYGMAPTGGLGIGIDRLVMLLTDTDTIRDVLLFPTMR 494
>gi|387819801|ref|YP_005680148.1| lysyl-tRNA synthetase [Clostridium botulinum H04402 065]
gi|322807845|emb|CBZ05420.1| lysyl-tRNA synthetase (class II) [Clostridium botulinum H04402 065]
Length = 504
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 337/518 (65%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ ++++ Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G ++Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGEEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + ND++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNIIKNDIEARTIAKEKH-------IEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|410494353|ref|YP_006904199.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410439513|emb|CCI62141.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 497
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|94988116|ref|YP_596217.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94992003|ref|YP_600102.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
gi|94993910|ref|YP_602008.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
gi|251782024|ref|YP_002996326.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|408401273|ref|YP_006859236.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|94541624|gb|ABF31673.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94543505|gb|ABF33553.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
gi|94545511|gb|ABF35558.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
gi|94547418|gb|ABF37464.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
gi|242390653|dbj|BAH81112.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|407967501|dbj|BAM60739.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 501
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 332/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 19 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 317 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 368 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 428 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|329769858|ref|ZP_08261257.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
gi|328837912|gb|EGF87536.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
Length = 500
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E +R GL+P+ K++RTH +N+L E + + EE ++ V++AGR++ +R
Sbjct: 19 VRREKMESMREHGLDPFGTKFERTHLSNELVEEFDKFSK-EELEEKSVTVTIAGRIMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y ++R+ D ++ K +D+GDI+GV+G + +T GELSV
Sbjct: 78 GKGKAGFAHVQDLGGQIQIYVRQDRV-GDSYEYFKT-LDLGDIVGVTGVLFKTNVGELSV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ILTK+L PLPDK+HGL DV++RYR+RYVD+I + + F R+KI+ +R +
Sbjct: 136 KADKFEILTKALRPLPDKFHGLKDVEERYRRRYVDLIMNEDSKETFILRSKIIQIMRSYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
G++EVETP++ AGGA ARPFVT+HN+L +L++RIA EL LKR+++GG EK+YEI
Sbjct: 196 NERGYLEVETPMMHTIAGGAAARPFVTHHNALDMELFMRIALELPLKRLIVGGLEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+STRHNPEFT IE+YEAY+DY +M++TE ++ + ++G I Y EI
Sbjct: 256 GRAFRNEGVSTRHNPEFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTKIMYGEDEI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R M + +K+ TG+DF + D + L + + VG
Sbjct: 316 DLTPKWARIHMVDAIKDVTGVDFWQEMTDEQ----------AHALAKEHNVPVRKDMKVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE+ VE LVQPTF+ +P+E+SPLAK + T+RFELFI RE ANAFSE
Sbjct: 366 HIINEFFEVFVEETLVQPTFIYGHPVEVSPLAKTNAEDKRFTDRFELFIVRREHANAFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R A + EK + E++ E +D+DFV ALEYGM
Sbjct: 426 LNDPIDQKERF-----------LAQMDEKDAGNEEVYE---------MDEDFVEALEYGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 466 PPTGGLGIGIDRLVMLLTNSASIRDVLLFPYMK 498
>gi|189423826|ref|YP_001951003.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|189420085|gb|ACD94483.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 492
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/513 (47%), Positives = 334/513 (65%), Gaps = 36/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +KV +L + G+ PY + H++ + Y + E+ ++ + +AGR++ARR+
Sbjct: 11 RRRKVNDLWAAGINPYPNDFKPQHTSVDVVAAY---GSVEQIDAPDVEFVLAGRIIARRS 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF+ L+D G IQ+Y K+ L + F Q + F DIGDI+G+ G RT+ GELSV
Sbjct: 68 FGKAAFMQLQDRKGRIQVYVRKDDLGEEVFAQFESF-DIGDIIGIVGFPFRTKTGELSVH 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
S +L KSLLPLP+K+HGLTDV+ RYRQRYVD+I PEV ++F KR++IV+ IR +
Sbjct: 127 ARSIRLLVKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRELFIKRSRIVNLIRSFMT 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S F+EVETP++ GGA ARPFVT+HN+L +LYLRIA EL+LKR+++GGFE+++EI
Sbjct: 187 SRDFLEVETPMMHQIPGGATARPFVTHHNALDMELYLRIAPELYLKRLVVGGFERVFEIN 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y+AY+ ++ +M+ TEE+ H A V G L YQG+ I
Sbjct: 247 RNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELFCHVAEQVLGTLGFSYQGLAIS 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGN-DLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+RPWRR T+ + E ID +L + DL +A ++ GL+ D S G
Sbjct: 307 FQRPWRRLTVKEAILEYGDIDAKKLDDRDLALAYARSI-----GLDLPDDI------SYG 355
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L+ E+FE V E KL+QPTFV YP E+SPL++ + + +RFEL I GRE+ANAFSE
Sbjct: 356 KLVMEIFEEVAEHKLIQPTFVTAYPTEVSPLSRKNDLDPYIVDRFELMIGGREIANAFSE 415
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R A V+EK E+ +D+D+V ALEYG+
Sbjct: 416 LNDPVDQKERF-----------LAQVAEKDKGDEEAH---------YMDEDYVRALEYGL 455
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G G+GIDRLVMLLT+SASIRDVI FP L+
Sbjct: 456 PPTAGEGIGIDRLVMLLTDSASIRDVILFPQLR 488
>gi|187777499|ref|ZP_02993972.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
15579]
gi|187774427|gb|EDU38229.1| lysine--tRNA ligase [Clostridium sporogenes ATCC 15579]
Length = 504
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 336/518 (64%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL++ G +P+ YK +RTH++ +++E Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQANGKDPFDVYKVERTHTSKEVKENYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + V G + Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYICEKVLGTTKVQYEGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + +D++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNSIKDDIEARTIAKEKH-------VEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|374578821|ref|ZP_09651915.1| lysyl-tRNA synthetase (class II) [Desulfosporosinus youngiae DSM
17734]
gi|374414903|gb|EHQ87338.1| lysyl-tRNA synthetase (class II) [Desulfosporosinus youngiae DSM
17734]
Length = 497
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 342/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K+E R +EPYA ++ RTH +++ E + L E VS+AGR++++R
Sbjct: 10 IRLEKLEMFRQADIEPYADRYLRTHKTSEVLERFEEL--------EGQEVSIAGRIMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +G IQ+Y + L FD + F D+GDI+GV G + RT++GE+S+
Sbjct: 62 DQGKVIFTHIQDLNGRIQIYIRMDELGQTMFDLITKF-DVGDIVGVKGKVFRTKRGEISI 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
++L+K++ PLP+K+HGLT+V+ RYR+RY+D++ P+V VF R+KI+ +R+ +
Sbjct: 121 HARDVLLLSKAMRPLPEKFHGLTNVETRYRKRYLDLVMNPDVRQVFVTRSKIIRYMREFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E F+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GG EK++EI
Sbjct: 181 EEREFLEVETPTLHTIPGGAAARPFITHHNALDIDLYLRIALELPLKRLIVGGLEKVFEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+A+++Y+ +M +TEE++ H V+G I YQG +
Sbjct: 241 GRTFRNEGISIKHNPEFTMMELYQAFANYEDIMELTEELIAHIVQKVHGTQEITYQGQPL 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PWRR +M + + E +G+DF E+ D ++ L A GL +E+ S G
Sbjct: 301 QFKTPWRRLSMLDGILEYSGVDFREILTD----EQARLIAQEKGLH------VEADSSRG 350
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++NE FE VEPKL+QPTF++ +P+EISPLAK + T+RFE FI GRE+ANAFSE
Sbjct: 351 KIINEFFEEFVEPKLIQPTFIIGHPVEISPLAKRNAMQPEYTDRFEAFIYGRELANAFSE 410
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q A E+ K DD ++ +D+DFV ALEYG+
Sbjct: 411 LNDPIDQRQRFEAQ-----------------AAERAK-GDDEAH--IMDEDFVQALEYGL 450
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT+SASIRDVI FP ++
Sbjct: 451 PPTGGLGIGVDRLVMLLTDSASIRDVILFPTMR 483
>gi|167769659|ref|ZP_02441712.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
17241]
gi|167668020|gb|EDS12150.1| lysine--tRNA ligase [Anaerotruncus colihominis DSM 17241]
Length = 657
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/517 (47%), Positives = 347/517 (67%), Gaps = 40/517 (7%)
Query: 62 VRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
V +R K+E L+++G +P+ + RT A + + + + E VS+AGR+
Sbjct: 24 VLQIRRDKLEALKNEGKDPFLTTSYTRTAYAQPIVDAF--------DDYEGREVSIAGRM 75
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
++RR GK +F+ +RD SG IQ Y ++ + + + K + DIGDI+G+ G + RT+KG
Sbjct: 76 MSRRIMGKASFIDVRDASGRIQSYVRRDEIGDEPYADFKKW-DIGDIVGIRGEVFRTQKG 134
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+S+ + +L+KSLLPLP+K+HGL D + RYRQRYVD+I PEV D F KR+KI++ I
Sbjct: 135 EISIKAHEITLLSKSLLPLPEKWHGLKDTELRYRQRYVDLIVNPEVKDTFVKRSKIITAI 194
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R +E+ G++EVETPVL AGGA ARPF+T+HN+L D+Y+RIA ELHLKR+++GGF+K
Sbjct: 195 RSFLEAKGYIEVETPVLHAIAGGAAARPFITHHNALDIDMYMRIALELHLKRLIVGGFDK 254
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YEIGR+FRNEG+ TRHNPEFT +E+YEAY+DY MM+ITE +V HCA AV G I Y
Sbjct: 255 VYEIGRVFRNEGIDTRHNPEFTLLELYEAYTDYHGMMDITEGLVRHCAHAVLGTGKIVYG 314
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
VEI L++P+ R +M VK+ +G+DF ++ ET +A E+ ++ E
Sbjct: 315 DVEIDLDKPFERLSMREAVKKYSGVDFAQI--------ETLEQARAIAKEHHIEY--EQR 364
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++L+ FE E L+QP F+ D+P++ISPL+K TERFELFI GRE AN
Sbjct: 365 HGKGDILSLFFEEYCEKHLIQPVFITDHPVDISPLSKRKPEEPEYTERFELFILGREHAN 424
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQR R E Q AA+ K++ + E++D +D+DF+TAL
Sbjct: 425 AFSELNDPIDQRGRFEHQ---------AAL--KAAGDD---EAND------IDEDFLTAL 464
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+G+DRLVMLLTNSASIRDV+ FP +K
Sbjct: 465 EYGMPPTGGLGIGVDRLVMLLTNSASIRDVLLFPTMK 501
>gi|375090122|ref|ZP_09736441.1| lysine-tRNA ligase [Facklamia languida CCUG 37842]
gi|374566015|gb|EHR37270.1| lysine-tRNA ligase [Facklamia languida CCUG 37842]
Length = 654
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/528 (44%), Positives = 344/528 (65%), Gaps = 34/528 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T+ + +R +K+ E++ G+ P+A ++R H + L E Y L +E+ E
Sbjct: 7 SGTTIEEMNDQLQVRRQKMREMQEAGVNPFAAGFERHHYSQDLLEEYEAL--DKEAFDER 64
Query: 112 D--HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILG 169
D V++AGR+V++R GK F ++D G IQ+Y K+++ D F K D+GDI+G
Sbjct: 65 DPIEVAIAGRIVSKRGKGKAGFAHIQDMKGRIQIYVRKDQIGDDAFVWWKA-CDLGDIVG 123
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
V G + +T GELSV F+ LTK+L PLPDK+HGLT+V++RYRQRY+D+I+ + D
Sbjct: 124 VKGHVFKTNTGELSVKAQDFIPLTKALRPLPDKFHGLTNVEQRYRQRYLDLIANQDSYDR 183
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
F KR++I+ EIR ++ ++EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELH
Sbjct: 184 FVKRSQIIREIRHYLDDRDYLEVETPVLHNLAGGAAARPFITHHNALDMELYLRIALELH 243
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GG E++YEI R+FRNEG+ T HNPEFT +E+Y AY+ + +M++ E +V A
Sbjct: 244 LKRLVVGGMERVYEISRVFRNEGIDTTHNPEFTMLEVYTAYTVFTDVMDLVEGLVREVAS 303
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G+ T+ Y+ I L W+R M +L+KEATG+DF +E TL
Sbjct: 304 KVLGQTTLTYEDHTIDLGTAWQRRHMVDLIKEATGVDF---------WQEMTLEEAKTLA 354
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
++ V + SVG+++N+ FE VE +L+QPTFV +P+EISPLA+ ++ T+RF
Sbjct: 355 KDHQVPVEDHEQSVGHIINKFFEEKVEERLIQPTFVYGHPVEISPLARKNQEDPRFTDRF 414
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
ELFI G+E ANAF+ELTDP+DQR R E Q ++EK++ ++ +
Sbjct: 415 ELFIVGKEYANAFTELTDPIDQRQRFEAQ-----------MAEKNAGNDEAQ-------- 455
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE+GMPP G+G+GIDRLVMLLTNS+SIRDV+ FP +K
Sbjct: 456 -PMDEDFIEALEHGMPPTGGLGIGIDRLVMLLTNSSSIRDVLLFPTMK 502
>gi|150021256|ref|YP_001306610.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
gi|166230598|sp|A6LMS4.1|SYK_THEM4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|149793777|gb|ABR31225.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
Length = 502
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/519 (44%), Positives = 347/519 (66%), Gaps = 39/519 (7%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
R RIK++E+L+ K + PY ++D+TH++ +++ + L GE + + VS AGR+++
Sbjct: 6 REQRIKEIEQLKRKNINPYPNRFDKTHTSEMIKKEFEGLNPGEVKD--DVFVSTAGRIMS 63
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
R GK AF ++D G IQ Y K+ + + ++ K + IGDI+GV G++ +++ GE+
Sbjct: 64 LRKHGKSAFFHIKDFYGRIQAYIRKDVVGEEAYEFFKEHIAIGDIVGVKGNVFKSKTGEI 123
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++L+ +L K L P+P+K+HG+ D + YRQRYVDMI+ + + F+ R +++ IR
Sbjct: 124 TILIKEIKLLNKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDDTLNRFKVRFEVIKLIRD 183
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+ S GF+EVETP+L+ GGA ARPFVT+ N ++Y+RIATEL+LKR ++GGFEK+Y
Sbjct: 184 FLNSKGFIEVETPILEYVTGGASARPFVTHLNVFDIEMYMRIATELYLKRFIVGGFEKVY 243
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
E+G+ FRNEGLS +H+PEFT+IE+Y+AY+DY+ MMN+TEE+ + + G I YQ V
Sbjct: 244 ELGKNFRNEGLSYKHHPEFTSIEIYQAYADYEDMMNLTEELFVYIVEKLFGTTKIKYQNV 303
Query: 363 EICLERPWRRETMHNLVKEATGIDFNE--LGNDLKVAKETTLRALGDGLENKDKFVIESS 420
E+ RPWRR M + +KE G+D E +G + V +E G +E +DK
Sbjct: 304 ELDFSRPWRRIKMRDFIKEHLGVDILEDSMGRMMDVLEEH-----GVEVEIRDK------ 352
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++ +++++ VE K+VQPTF+L++P+EISPLAK HR +TERFEL I GREMAN
Sbjct: 353 ---GHMIEKLWDL-VEDKVVQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMAN 408
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ R +QV +L+E+ D ++ +D DFV AL
Sbjct: 409 AFSELNDPVDQYERFLKQV-------------------ELREAGDEEAQM-MDRDFVRAL 448
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
EYGMPP G+G+GIDRLVMLLTNSA+IRDVIAFP+++++
Sbjct: 449 EYGMPPTGGLGIGIDRLVMLLTNSATIRDVIAFPLVRLK 487
>gi|290894520|ref|ZP_06557472.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|404406681|ref|YP_006689396.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
gi|290555921|gb|EFD89483.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|404240830|emb|CBY62230.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
Length = 498
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/515 (46%), Positives = 334/515 (64%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND--HVSVAGRVVA 122
+R +KV+ LR +G++P+ K+ R+ S +EI A+ + E D VSVAGR++
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISP---EEIETKFADKSKEELEEDAIEVSVAGRIMT 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GEL
Sbjct: 72 KRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKL-ADLGDIIGIKGTIFRTNTGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R
Sbjct: 131 SVKATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRD 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++S GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+Y
Sbjct: 191 YMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG STRHNPEFT +E Y AY DY+ +MN+ E +V+ VNG I Y
Sbjct: 251 EIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNGTTEITYGEY 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
++ L WRR M + VKE G+DF + +D + A+E L K + +
Sbjct: 311 KVDLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHDVPVTEHMT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAF
Sbjct: 361 YGHILNEFFETHVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEY
Sbjct: 421 SELNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DRLVMLLTN+ SIRD++ FP +K
Sbjct: 461 GLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMK 495
>gi|303248492|ref|ZP_07334750.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302490112|gb|EFL50032.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 529
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/462 (49%), Positives = 314/462 (67%), Gaps = 31/462 (6%)
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGR+VA R+FGK+AF T++D SG +Q++ E++ L +D + K F DIGDI+GV+G +
Sbjct: 92 LAGRIVALRSFGKVAFFTVQDASGRLQVFAERDTLGTDVYSTFKKF-DIGDIVGVTGKLF 150
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RT+ GEL++ + +LTKS+ PLP+KYHGL DV+ RYRQRYVD+I P+ ++F+ R K
Sbjct: 151 RTKTGELTLHAATIKLLTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPKAVEIFKARTK 210
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
IV E+R +++ GF+EVETP++Q GGA A+PF+T+HN+L LY+RIA EL+LKR+L+
Sbjct: 211 IVRELRAFLDTAGFMEVETPMMQAIPGGATAKPFITHHNALDMSLYMRIAPELYLKRLLV 270
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFE++YE+GR FRNEG+STRHNPEFT E Y A++ Y +M++TE + H A AV G
Sbjct: 271 GGFERVYEVGRNFRNEGISTRHNPEFTMCEFYWAFARYNDLMDLTERLFGHIARAVTGSD 330
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
++YQG I L W R H ++ GID + ND AK L K
Sbjct: 331 AVEYQGQTIHLGPGWARVPFHESLQTIGGID-PAVYNDFDAAK---------ALVEKSGE 380
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+ +G + ++F+I VEPKL++P F+ YP EISPL++ + +T+RFELFI G
Sbjct: 381 KVLKGEKLGKVQAKLFDIFVEPKLIEPHFIYHYPTEISPLSRRNTDDPTITDRFELFIAG 440
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
REMANAFSEL DP+DQR R EEQVR EK A DD ++ +DDD
Sbjct: 441 REMANAFSELNDPVDQRQRFEEQVR---EKEAG---------------DDEAHR--MDDD 480
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+V ALEYGMPPA+G G+GIDRLVMLLT+ ASIR+VI FP+L+
Sbjct: 481 YVRALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPLLR 522
>gi|374710870|ref|ZP_09715304.1| lysyl-tRNA synthetase [Sporolactobacillus inulinus CASD]
Length = 496
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/514 (45%), Positives = 332/514 (64%), Gaps = 36/514 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV--AGRVVAR 123
R +K++ L +G++P+ +DRTH +I H AN E + V+V AGR++A+
Sbjct: 14 RREKLKVLFEQGIDPFGGHYDRTHDTG---DIRSHYANHTTEELEANPVAVVMAGRLMAK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQLY K+ + +Q++ K +DIGD +GV G++ +T GELS
Sbjct: 71 RRKGKAGFADIQDFSGRIQLYIRKDAVGEEQYEIFK-HIDIGDFVGVEGTVFKTHVGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ VN F IL+K++ PLPDK+HGL DV++RYRQRY+D+I PEV + F R+KIV IR
Sbjct: 130 IKVNKFEILSKAMRPLPDKFHGLKDVEQRYRQRYLDLIVNPEVRETFILRSKIVKAIRDE 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETP + GGA ARPF+T+HN+L DLY+RIA ELHLKR++IGGFE++YE
Sbjct: 190 LDGQGYLEVETPTMHSIPGGAAARPFITHHNALDMDLYMRIAIELHLKRLIIGGFERVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR++RNEG+ST+HNPEFT +E+Y AY D + +M +TE +++ A V G I Y +
Sbjct: 250 IGRVYRNEGVSTKHNPEFTMMELYTAYQDLRDVMELTENLISSVAQKVLGTTEITYGDAK 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L+ WRR M +KE TG+D +D + K L ++ ++ +
Sbjct: 310 VDLKPRWRRVHMVEAIKEQTGVDLWPQMSDEEARK----------LAAENGVSVKEDMTY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L+QPTF+ +P+ ISPLAK + ++RFELFI GRE NAFS
Sbjct: 360 GHVVNEFFEQKVEETLIQPTFIYGHPVVISPLAKKDPKDPRFSDRFELFIVGREHGNAFS 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E+Q+R+ R A E +D+DF+ A+EYG
Sbjct: 420 ELNDPIDQRQRFEDQMRE----REAGNDEAQ----------------VIDEDFLEAMEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTNSASIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSASIRDVLLFPQMR 493
>gi|383493596|ref|YP_005411272.1| lysyl-tRNA synthetase protein LysS [Streptococcus pyogenes
MGAS1882]
gi|378929324|gb|AFC67741.1| lysyl-tRNA synthetase protein LysS [Streptococcus pyogenes
MGAS1882]
Length = 497
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 331/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGFDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|206889994|ref|YP_002249051.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741932|gb|ACI20989.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 494
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 346/514 (67%), Gaps = 38/514 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV--SVAGRVVAR 123
RIKK+ LRS G+EPY ++ + S ++I++ E+ + EN+++ SVAGRV+
Sbjct: 13 RIKKLTALRSLGIEPYNGTFEPSDST---EDIFKKFGEFEKEHLENENITISVAGRVILL 69
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R FGK AF ++D G IQ+Y K+ +L ++F +K +DIGDI+GV G + RT+ EL+
Sbjct: 70 RDFGKAAFAHVQDSKGKIQIYLRKD-ILGEKFSLIKN-LDIGDIVGVEGRLFRTKTNELT 127
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V++FV L+KSL PLP+K+HGL D++ RYRQRYVD+I P V + F KR I+ +R+
Sbjct: 128 IEVHNFVFLSKSLRPLPEKWHGLKDIEARYRQRYVDLIVNPSVKETFVKRQLIIKYLREF 187
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E+ GF+EVETP++ AGGA A+PF TYH +L +LYLRIA EL+LKR+L+GGFE+++E
Sbjct: 188 LENEGFLEVETPMMHTIAGGARAKPFKTYHEALDMELYLRIAPELYLKRLLVGGFERVFE 247
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IG+ FRNEG+ST+HNPEFT IE Y AY DY +M+ TE+++++ V G L + Y
Sbjct: 248 IGKNFRNEGISTKHNPEFTMIEFYVAYKDYNWLMDFTEKLLSYITQKVCGSLQVKYGDYI 307
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I P++R TM + +K G+ E+ D +A + A G+E I S+
Sbjct: 308 IDFTPPFKRITMFDALKNK-GVP-EEVMKDCNLAFKW---AKAKGIE------IPEGSSL 356
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
+L+E+F+ VVEP+L+QPTF++DYP+E+SPLAK + + L ERFELFI GREMANAFS
Sbjct: 357 SKVLDEIFKEVVEPELIQPTFIIDYPVELSPLAKRKKDNPELVERFELFIAGREMANAFS 416
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DPLDQ+ R Q+ +E+LK D+ E +D+DFV ALE G
Sbjct: 417 ELNDPLDQKERFLRQL-----------------EERLK-GDEEVPE--MDEDFVRALEIG 456
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPPA+G G+GIDRLVM+LTN+ SIRDVI FP+L+
Sbjct: 457 MPPAAGEGIGIDRLVMILTNNQSIRDVILFPLLR 490
>gi|422940013|ref|ZP_16967375.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339890084|gb|EGQ79267.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 493
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/520 (45%), Positives = 336/520 (64%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
+RE + A R KK+EEL S G++P+ K+D+ N + ++ +H + EN A
Sbjct: 9 EREPLIAERWKKIEELESYGIKPFGRKYDKQ---NMIGDVLKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNVGDIVGIEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +L K++ LP+KYHGLTDV+ RYR+RY+D+I PEV D+F KR +I+
Sbjct: 120 HTEELTLRVKSISLLAKNVRSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRDIFIKRTEII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
EIRK ++ GF+EVETP++ GGA ARPF+T+HN+L DLYLRIA EL+LKR+++GG
Sbjct: 180 KEIRKYLDDRGFLEVETPMMHQILGGAAARPFITHHNALNLDLYLRIAVELYLKRLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
F+K+YE+G+ FRNEG+S RHNPEFT IE+Y+A++D+ MM+I E +++ +NG I
Sbjct: 240 FDKVYEMGKDFRNEGISVRHNPEFTMIELYQAHADFNDMMDIAEGMISTICEKINGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
Y GV++ L + ++R M +++K+ TG+DF KE T + +
Sbjct: 300 VYDGVQLSL-KNFKRVHMVDMIKDVTGVDF---------WKEMTFEEAKQLAKEHHVEIA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 PHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV + A +E+++ +D+D+V
Sbjct: 410 YANAFTELNDPADQRGRFEAQVEE-----ALRGNEEATP--------------VIDEDYV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP GMG+GIDRLVMLLT S SIRDVI FP +K
Sbjct: 451 EALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFPQMK 490
>gi|256544718|ref|ZP_05472090.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
gi|256399607|gb|EEU13212.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
Length = 637
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/528 (46%), Positives = 341/528 (64%), Gaps = 47/528 (8%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
+ + D + +R +K+E+L+++G P+A R S L E + N EE E
Sbjct: 2 ANNNQDLNEMLQIRREKLEKLKAEGKNPHAIVNYRNRS---LSEDIKD--NFEEF--EGK 54
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
V VAGR++ARR G ++F+ ++D G IQ+ ++ ++ D F + K + DIGDI+G+ G
Sbjct: 55 IVRVAGRIMARRGHGNMSFMDVQDSLGQIQV-VNRKNIMGDNFKETKGY-DIGDIIGIEG 112
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
+ +T +GE+S+ +LTKSL LP+K+HGL D D RYRQRYVD+I PEV DVF
Sbjct: 113 KVFKTNQGEISIETEHADLLTKSLQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKDVFVL 172
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
R+KI+SEIRK +E+ GF+EVETP+L AGGA ARPF+T+HNSL +YLRIA+EL+LKR
Sbjct: 173 RSKIISEIRKFLENRGFLEVETPILNTIAGGASARPFITHHNSLDIGMYLRIASELYLKR 232
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGF+K+YEIGR+FRNEG+ HNPEFTT+E+Y+AY D++ MM ITE +V A V
Sbjct: 233 LIVGGFDKVYEIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITETMVEEVANKVK 292
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELG---NDLKVAKETTLRALGDGL 409
G +++ G EI L+ PW+R +M + VKE +G+DFNE+ + +K+AKE
Sbjct: 293 GTTLVEFDGKEIELKTPWKRISMIDAVKEYSGVDFNEITEYEDAVKIAKEKN-------- 344
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
IE + G ++ E F+ VE KL+QPTFV+DYP+EISPLAK LT RF
Sbjct: 345 -------IEVKSTRGEIIAEFFDEFVEDKLIQPTFVIDYPVEISPLAKRKNDDESLTYRF 397
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
E F+ G E+ANAFSEL D +DQ+ R +QV KR A DD ++
Sbjct: 398 EAFVNGAEIANAFSELNDAVDQKQRFLDQVA----KREAG--------------DDEAH- 438
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DFV ALE GMPP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 439 -MMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQRSIRDVLLFPTMK 485
>gi|170759400|ref|YP_001788859.1| lysyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
gi|238688747|sp|B1KTC1.1|SYK_CLOBM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|169406389|gb|ACA54800.1| lysine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 504
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/518 (45%), Positives = 337/518 (65%), Gaps = 43/518 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ ++++ Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G ++Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + +D++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNIIKDDIEARAIAKEKH-------IEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GMPP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMKPQ 500
>gi|237745072|ref|ZP_04575553.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|260494850|ref|ZP_05814980.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|336400407|ref|ZP_08581186.1| lysyl-tRNA synthetase [Fusobacterium sp. 21_1A]
gi|423138427|ref|ZP_17126070.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229432301|gb|EEO42513.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|260198012|gb|EEW95529.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|336162595|gb|EGN65559.1| lysyl-tRNA synthetase [Fusobacterium sp. 21_1A]
gi|371957792|gb|EHO75535.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 493
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/520 (45%), Positives = 336/520 (64%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
+RE + A R KK+EEL S G++P+ K+D+ N + ++ +H + EN A
Sbjct: 9 EREPLIAERWKKIEELESYGIKPFGRKYDKQ---NMIGDVLKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNVGDIVGIEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +L K++ LP+KYHGLTDV+ RYR+RY+D+I PEV D+F KR +I+
Sbjct: 120 HTEELTLRVKSISLLAKNVRSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRDIFIKRTEII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
EIRK ++ GF+EVETP++ GGA ARPF+T+HN+L DLYLRIA EL+LKR+++GG
Sbjct: 180 KEIRKYLDERGFLEVETPMMHQILGGAAARPFITHHNALNLDLYLRIAVELYLKRLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
F+K+YE+G+ FRNEG+S RHNPEFT IE+Y+A++D+ MM+I E +++ +NG I
Sbjct: 240 FDKVYEMGKDFRNEGISVRHNPEFTMIELYQAHADFNDMMDIAEGMISTICEKINGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
Y GV++ L + ++R M +++K+ TG+DF KE T + +
Sbjct: 300 VYDGVQLSL-KNFKRVHMVDMIKDVTGVDF---------WKEMTFEEAKQLAKEHHVEIA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 PHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV + A +E+++ +D+D+V
Sbjct: 410 YANAFTELNDPADQRGRFEAQVEE-----ALRGNEEATP--------------VIDEDYV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP GMG+GIDRLVMLLT S SIRDVI FP +K
Sbjct: 451 EALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFPQMK 490
>gi|328950625|ref|YP_004367960.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
gi|328450949|gb|AEB11850.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
Length = 499
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/517 (46%), Positives = 331/517 (64%), Gaps = 48/517 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R++ +E L+ G E Y Y++ +TH A Q+ E + GEE + V +AGR+VA R
Sbjct: 11 RLRNLEALKEAGYEAYPYRYPKTHDAAQILEAHAGAGPGEEWP---EVVRLAGRLVALRR 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L D SG IQLY K+ + ++ LK +DIGDI+GV G++ T+ GE++V
Sbjct: 68 MGKVTFAHLLDGSGRIQLYFNKQE--TPDYNLLKK-LDIGDIIGVEGTVFTTKTGEITVR 124
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L KSL PLPDK+HG+ D + RYRQRY+D+I PEV +VF+KRA+IV +R+ +E
Sbjct: 125 VTRWTLLVKSLRPLPDKWHGIRDKEVRYRQRYLDLIVNPEVREVFKKRAQIVRFVRRFLE 184
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETPV+ AGG EARPF TYHN+LG + LRIA EL LKR+L+GGFEK++EIG
Sbjct: 185 DRGFLEVETPVIVPTAGGTEARPFRTYHNALGTEFELRIALELPLKRLLVGGFEKVFEIG 244
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ +HNPEFT +E+Y AY+DY + + E++++ A A++G T+ YQG EI
Sbjct: 245 RVFRNEGIDAQHNPEFTMLELYWAYADYNDVAQLVEDLLSSLAKAIHGSYTVPYQGREID 304
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
P++R + +KE G+DF+ L LE ++ P +
Sbjct: 305 FTPPFKRISFVETLKERAGLDFDPL-----------------DLEQLQRWARAKHPEFAD 347
Query: 426 -----LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
LL+++FE VE +L PTFV D+P+ ISPLAK HR GLTER++LF+ G E+A
Sbjct: 348 VPSYKLLDKLFEHYVEAELWNPTFVYDFPLAISPLAKKHREKPGLTERWDLFVAGLELAP 407
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
A+SEL DPLDQRAR EEQ R +R A E H Y D+DF+ AL
Sbjct: 408 AYSELNDPLDQRARFEEQAR----RREAGDEEA------------HGY----DEDFLVAL 447
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E+ MPPA G+G+GIDRL M+LT+ SIRDVI FP+LK
Sbjct: 448 EHAMPPAGGLGIGIDRLTMILTDMPSIRDVILFPLLK 484
>gi|15674679|ref|NP_268853.1| lysyl-tRNA synthetase [Streptococcus pyogenes SF370]
gi|71910308|ref|YP_281858.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
gi|410680174|ref|YP_006932576.1| lysyl-tRNA synthetase [Streptococcus pyogenes A20]
gi|39932234|sp|Q9A0V7.1|SYK_STRP1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|13621797|gb|AAK33574.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
gi|71853090|gb|AAZ51113.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
gi|409692763|gb|AFV37623.1| lysyl-tRNA synthetase [Streptococcus pyogenes A20]
Length = 497
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/517 (46%), Positives = 334/517 (64%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVRGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+ P++R M + +KE TG DF + + +AKE + +K I
Sbjct: 313 RINEPFKRVHMVDAIKEVTGADFWPEMTVEEAIALAKEKQVPL--------EKHFI---- 360
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANA
Sbjct: 361 SVGHIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANA 420
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
F+EL DP+DQ +R E AQ + KE DD + +D DFV AL
Sbjct: 421 FTELNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEAL 459
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|449990540|ref|ZP_21821608.1| lysyl-tRNA synthetase [Streptococcus mutans NVAB]
gi|449181629|gb|EMB83704.1| lysyl-tRNA synthetase [Streptococcus mutans NVAB]
Length = 496
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 337/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|241896599|ref|ZP_04783895.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
gi|241870080|gb|EER73831.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
Length = 494
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/512 (45%), Positives = 337/512 (65%), Gaps = 32/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K+ ELR G++P+ +++DRTH A++L +Y ++ GE+ ++ + V++AGR++ +R
Sbjct: 15 RREKMTELRDAGIDPFGHRFDRTHMASELHTLYDDVS-GEDLEAQANEVAIAGRMMTKRR 73
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK++F ++D SG IQ++ +K + + ++ K D+GD LG G++ +T GELS+
Sbjct: 74 SGKISFADIKDRSGRIQVFVQKPVVGEETYEWFKK-SDLGDWLGFKGTIMKTRAGELSLN 132
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + L+K+L PLPDK+HGLTD++ +YRQRY+D+I+ + D F+KR+KI+S IR ++
Sbjct: 133 VTAITHLSKALRPLPDKFHGLTDIETKYRQRYLDLIANDDSFDRFQKRSKIISAIRAYMD 192
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF EVETP+LQ AAGGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG E++YEIG
Sbjct: 193 GDGFTEVETPMLQNAAGGAAARPFITHHNALNIDLYMRIALELHLKRLIVGGMERVYEIG 252
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ +HNPEFT +E Y A+ D +M TE I A V + I YQ I
Sbjct: 253 RVFRNEGMDPKHNPEFTVMESYAAFWDLGDVMTETENIFKAAAKVVADDMIITYQEHTID 312
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
L +P+ R+ M +L+KE TG+DF + D V + RA+ D E K+ E VG+
Sbjct: 313 LAKPFARKHMVDLIKEKTGVDFWQ---DYTVEE---ARAIAD--EKGVKY--EQYWGVGH 362
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++NE FE VE L++PTFV +P+E+SPLAK +RFELFI G E ANAF+EL
Sbjct: 363 IINEFFENFVEDTLIEPTFVYGHPVEVSPLAKKSDDDKRFAQRFELFISGGEYANAFTEL 422
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQR R E Q + RAA E +D+DF+ +LEYGMP
Sbjct: 423 NDPIDQRERFEAQAAE----RAAGNDEAEG----------------IDEDFIESLEYGMP 462
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRLVMLLTN+ +IRDV+ FP ++
Sbjct: 463 PTGGLGIGIDRLVMLLTNADTIRDVLLFPTMR 494
>gi|440785135|ref|ZP_20962085.1| lysyl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218507|gb|ELP57727.1| lysyl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 505
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 332/513 (64%), Gaps = 37/513 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K+ +L++ G +P+ Y DR+H++ Q++E Y L E + V+VAGR++++R
Sbjct: 26 RRQKLSDLQAAGKDPFDVYTVDRSHTSEQIKENYDEL--------EGETVTVAGRLMSKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + + ++ K F DIGD + ++G++ +T+ GE+S+
Sbjct: 78 VHGKAGFSDIYDRYGKIQLYIKIDDVGEEKLKSYKTF-DIGDFVSITGTVFKTKTGEVSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +L+KSL PLP+K+HGL D D RYRQRYVD+I EV D F KR I+ IR+ +
Sbjct: 137 HITDFELLSKSLKPLPEKFHGLKDPDLRYRQRYVDLIINKEVRDTFFKRTAIIKAIREFL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ ++EVETP+L AGGA ARPF T+HN+L D+YLRIATEL+LKR+++GGFE++YEI
Sbjct: 197 DNRDYLEVETPILSPIAGGAAARPFNTHHNALDIDMYLRIATELYLKRLIVGGFERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + V G + YQG EI
Sbjct: 257 GKNFRNEGIDVRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVLGTTKVTYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PW+R TM + VKE + +DFN + D + + L + +D + G
Sbjct: 317 DFKPPWKRITMVDAVKEYSSVDFNNINTDEEARSIAKEKGLELKKKLED-------CTKG 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN++FE E KL+QPTF+ DYP+EISPL K R + TERFE F+ GRE+ NA+SE
Sbjct: 370 DILNQLFEDYCEDKLIQPTFICDYPVEISPLTKKKRGNEEFTERFEGFVFGREICNAYSE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ Q+ R +Q+R+ + DD +Y +DDDF+ ALE GM
Sbjct: 430 LNDPIVQKDRFIQQLRER------------------ELGDDEAY--MMDDDFINALEIGM 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+M LT++ SIRDVI FP +K
Sbjct: 470 PPTGGLGIGIDRLIMFLTDAYSIRDVILFPTMK 502
>gi|217965685|ref|YP_002351363.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|386006957|ref|YP_005925235.1| lysyl-tRNA synthetase [Listeria monocytogenes L99]
gi|386025538|ref|YP_005946314.1| lysyl-tRNA synthetase [Listeria monocytogenes M7]
gi|217334955|gb|ACK40749.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|307569767|emb|CAR82946.1| lysyl-tRNA synthetase [Listeria monocytogenes L99]
gi|336022119|gb|AEH91256.1| lysyl-tRNA synthetase (class II) [Listeria monocytogenes M7]
Length = 498
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/515 (46%), Positives = 334/515 (64%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND--HVSVAGRVVA 122
+R +KV+ LR +G++P+ K+ R+ S +EI A+ + E D VSVAGR++
Sbjct: 15 VRREKVDILREEGIDPFGEKFIRSISP---EEIETKFADKSKEELEEDAIEVSVAGRIMT 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GEL
Sbjct: 72 KRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R
Sbjct: 131 SVKATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRD 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++S GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+Y
Sbjct: 191 YMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG STRHNPEFT +E Y AY DY+ +MN+ E +V+ VNG I Y
Sbjct: 251 EIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNGTTEITYGEY 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
++ L WRR M + VKE G+DF + +D + A+E L K + +
Sbjct: 311 KVDLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHDVPVTEHMT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAF
Sbjct: 361 YGHILNEFFETHVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEY
Sbjct: 421 SELNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DRLVMLLTN+ SIRD++ FP +K
Sbjct: 461 GLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMK 495
>gi|282882559|ref|ZP_06291180.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297701|gb|EFA90176.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 637
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/529 (45%), Positives = 342/529 (64%), Gaps = 47/529 (8%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSEN 111
+T+ + + +R +K+EELR + +P+ + K+D + +Q+ N EE + ++
Sbjct: 3 NTNKDNLNEILVMRRQKLEELRKENKDPFIFEKYDVDSYSKDIQD------NFEEFDGKD 56
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V +AGRV+++R GK+ FL L+D G IQ++ K+ LL + ++ +K +D+GDI+GV
Sbjct: 57 --VCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDVLL-ENYEDVKG-LDMGDIIGVK 112
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +TE GE++V +L+KSL LP+K+HGL D D RYRQRYVD+I PE+ +VF
Sbjct: 113 GKVFKTEAGEVTVNAEKLDLLSKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEIKEVFL 172
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
KR KI+ IR+ ++ GF+EVETP+L AGGA ARPF+T+HN+L D+ LRIA EL LK
Sbjct: 173 KRTKIIKAIRQYLDEKGFIEVETPILGTVAGGANARPFLTHHNTLDIDMQLRIANELFLK 232
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GGF+K+YE+G++FRNEG+ TRHNPEFT IE+Y+AY D MM ITE I + A V
Sbjct: 233 RLIVGGFDKVYEMGKMFRNEGMDTRHNPEFTNIELYQAYVDMDEMMAITENIFEYAAQKV 292
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDG 408
G I YQG EI L+ PWRR +M VKE G+DF+++ D ++AKE G
Sbjct: 293 LGTDKITYQGTEISLKAPWRRMSMIEAVKEYAGVDFDKVETDEQAQQLAKEK-------G 345
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E +E S G +L+E FE E KLVQPTF+ +P++ISPLAK + LT R
Sbjct: 346 VE------VEEGSSWGKILSEFFETFCEEKLVQPTFITGHPVDISPLAKKDPKDKRLTRR 399
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI E ANAFSEL DP+DQR R E QVR+H ++ D+ ++
Sbjct: 400 FEAFINTWEFANAFSELNDPIDQRERFEAQVREH------------------EKGDEEAH 441
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DF+ A+E G+PP G+G+G+DR++MLLT+ SIRD+I FP +K
Sbjct: 442 --PMDSDFINAIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILFPTMK 488
>gi|227509315|ref|ZP_03939364.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227191245|gb|EEI71312.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 501
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 331/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR +G++P+ +++ RT+ A QL + + + + N N V+VAGR++A+R
Sbjct: 13 VRRQKMDELRKEGIDPFGHRFQRTYLATQLHDEFDNTDKDDLMNL-NKKVTVAGRMMAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G IQ+Y K+ + D + K DIGD LG+SG + +T+ GEL+V
Sbjct: 72 GKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKR-SDIGDHLGISGQIIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDK+HGL D +++YRQRY+D+IS + D F KR+ I++ IR +
Sbjct: 131 RAESVTFLSKALRPLPDKWHGLQDQEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S ++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I A V I YQG I
Sbjct: 251 GRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKTVTDDGMITYQGHTI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L++P++R+ M + +KE TGIDF + +D K L ++ E G
Sbjct: 311 DLDKPFKRQHMVDAIKEYTGIDFWKPMDDDAAKK----------LADEHHIHYEPWWKTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE +V+PKL QPTF+ +P+EISPLAK + T+RFEL+I E ANAF+E
Sbjct: 361 HIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNAEDPRFTDRFELYILTNEFANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ E A +D+D++ ALEYGM
Sbjct: 421 LNDPIDQRQRFEAQVKERQEGNDEAEG--------------------IDEDYIEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493
>gi|422858072|ref|ZP_16904722.1| lysine--tRNA ligase [Streptococcus sanguinis SK1057]
gi|327461043|gb|EGF07376.1| lysine--tRNA ligase [Streptococcus sanguinis SK1057]
Length = 496
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 337/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYND-KDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + T L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAAT-------LAKEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D DFV ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|295111294|emb|CBL28044.1| Lysyl-tRNA synthetase (class II) [Synergistetes bacterium SGP1]
Length = 511
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/523 (47%), Positives = 343/523 (65%), Gaps = 34/523 (6%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPY-AYKWD-RTHSANQLQEIYRHLANGEESNSENDHV 114
+D E VR ++ K + R +G +PY A WD R H A+ ++ + HLA E + E +
Sbjct: 18 ADNEVVRQMKEKLLRLRREEGFDPYVAETWDCRDHLAD-VRCRFEHLA--PEESDETVTL 74
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
S AGR++ R G+ F L D++G IQLY + L ++ LK +VD GD LGV G
Sbjct: 75 STAGRLMTLRRQGRTTFADLADETGRIQLYFQVNALGEKPYEFLKKWVDTGDWLGVVGHP 134
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
RT++GEL++ V + +L+KS+ PLP+K+HGLTD + RYR+RY+D+I+ PEV +VFRKR+
Sbjct: 135 CRTKRGELTIQVTDYKLLSKSIRPLPEKWHGLTDTETRYRRRYMDLIANPEVREVFRKRS 194
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI+S R+T+E+ G +EVETP+L AGGA ARPF T+HN+LG D+YLRIA EL+LKR++
Sbjct: 195 KIISSFRETLEAHGSLEVETPILSVLAGGANARPFKTFHNALGLDMYLRIAVELYLKRLV 254
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+G ++YEIGR FRNEG+ T HNPEFT +E+Y Y++Y+ MMN+ EE++ + A A+ G
Sbjct: 255 VGMMGRVYEIGRNFRNEGIDTMHNPEFTMMEVYWPYANYEDMMNLAEELIRNAAKAI-GT 313
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
L I++ GV+ L RP+RR TM + VKE G+D + + +D K + LG L+
Sbjct: 314 LEIEWNGVKADLSRPFRRITMLDAVKEYAGVDLSAVTDDEAARKIAREKGLGGDLKG--- 370
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
ES +V NLL E F E K+VQPTFV+ +P EISPL+K + T RFELF+
Sbjct: 371 --TESRFAVLNLLYEAF---CEEKMVQPTFVMGHPTEISPLSKRDPENPDYTHRFELFMF 425
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
G+E+ANAFSEL DPLDQRAR E+Q+R K + DD ++ D+
Sbjct: 426 GKEVANAFSELNDPLDQRARFEDQMR------------------KKEAGDDEAH--AFDE 465
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ A+E G+PP GMG+G+DRLVM LT + SIRDVI FP +K
Sbjct: 466 DFINAIEVGLPPTGGMGIGMDRLVMFLTGARSIRDVILFPAMK 508
>gi|169836741|ref|ZP_02869929.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
TM7a]
Length = 494
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/526 (45%), Positives = 341/526 (64%), Gaps = 40/526 (7%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
S + + ++KKV EL+ G+EPY K+++ N + EI ++ + D
Sbjct: 2 SNQNQNDNGIIKEKLKKVAELKEIGIEPYGRKYEK---VNDIAEINQY-------DETCD 51
Query: 113 HV-SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V AGR++A R GK F ++D +G IQ Y +KE + DQ++ K + +GD +G+
Sbjct: 52 KVFKTAGRIIAFRRMGKNGFGKIQDPTGQIQYYVKKEEVGEDQYEIYKK-MGLGDFIGLE 110
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GEL++ V+SF +L+K++ PLP+K+HGLT+V+ RYRQRYVD++ EV + +
Sbjct: 111 GHLFRTKTGELTLRVDSFEVLSKNVRPLPEKFHGLTNVETRYRQRYVDLVMNREVMETMK 170
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
KR +++ R +E GF EVETP++ AGGA ARPFVT+HN+L +L+LRIA EL+LK
Sbjct: 171 KRFQVIRFFRSYLEKKGFTEVETPMMHPIAGGATARPFVTHHNALDMELFLRIAPELYLK 230
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+L+GGFEK++EI R FRNEG+S +HNPEFT +E+Y+AY+D+ MM++TE++++ +
Sbjct: 231 RLLVGGFEKVFEINRSFRNEGISVKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFEL 290
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
+GK I+Y+ I L +PWRR TM VKEATG DF+ + +D + ++ + G LE
Sbjct: 291 HGKYEIEYEDKTINLAKPWRRVTMKEAVKEATGFDFDSISSDEEAIEKA--KEFGIPLE- 347
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
KDK + + +LN FE VE L+ PTF+ +YP EISPL+K + +RFEL
Sbjct: 348 KDK-----TYTKFGILNLFFEEKVEETLINPTFITEYPKEISPLSKNQKGETEWVDRFEL 402
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANA+SEL DP DQ+ R EEQV KLKE+ D +
Sbjct: 403 FISGREFANAYSELNDPRDQKERFEEQV-------------------KLKEAGDDEAQ-G 442
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D++ ALEYGMPPA G+G+GIDRLVML TNSASIRDVI FP L+
Sbjct: 443 MDLDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVILFPTLR 488
>gi|449903015|ref|ZP_21791868.1| lysyl-tRNA synthetase [Streptococcus mutans M230]
gi|450109373|ref|ZP_21861395.1| lysyl-tRNA synthetase [Streptococcus mutans SM6]
gi|449226263|gb|EMC25813.1| lysyl-tRNA synthetase [Streptococcus mutans SM6]
gi|449261750|gb|EMC59215.1| lysyl-tRNA synthetase [Streptococcus mutans M230]
Length = 496
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 337/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINAPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|300814671|ref|ZP_07094922.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511290|gb|EFK38539.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 640
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/529 (45%), Positives = 342/529 (64%), Gaps = 47/529 (8%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSEN 111
+T+ + + +R +K+EELR + +P+ + K+D + +Q+ N EE + ++
Sbjct: 3 NTNKDNLNEILVMRRQKLEELRKENKDPFIFEKYDVDSYSKDIQD------NFEEFDGKD 56
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V +AGRV+++R GK+ FL L+D G IQ++ K+ LL + ++ +K +D+GDI+GV
Sbjct: 57 --VCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDILL-ENYEDVKG-LDMGDIIGVK 112
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +TE GE++V +L+KSL LP+K+HGL D D RYRQRYVD+I PE+ +VF
Sbjct: 113 GKVFKTEAGEVTVNAEKLDLLSKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEIKEVFL 172
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
KR KI+ IR+ ++ GF+EVETP+L AGGA ARPF+T+HN+L D+ LRIA EL LK
Sbjct: 173 KRTKIIKAIRQYLDDKGFIEVETPILGTVAGGANARPFLTHHNTLDIDMQLRIANELFLK 232
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GGF+K+YE+G++FRNEG+ TRHNPEFT IE+Y+AY D MM ITE I + A V
Sbjct: 233 RLIVGGFDKVYEMGKMFRNEGMDTRHNPEFTNIELYQAYVDMDEMMAITENIFEYAAQKV 292
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDG 408
G I YQG EI L+ PWRR +M VKE G+DF+++ D ++AKE G
Sbjct: 293 LGTDKITYQGTEISLKAPWRRMSMIEAVKEYAGVDFDKVQTDEQAQQLAKEK-------G 345
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E +E S G +L+E FE E KLVQPTF+ +P++ISPLAK + LT R
Sbjct: 346 VE------VEEGSSWGKILSEFFETFCEEKLVQPTFITGHPVDISPLAKKDPKDTRLTRR 399
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI E ANAFSEL DP+DQR R E QVR+H ++ D+ ++
Sbjct: 400 FEAFINTWEFANAFSELNDPIDQRERFEAQVREH------------------EKGDEEAH 441
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DF+ A+E G+PP G+G+G+DR++MLLT+ SIRD+I FP +K
Sbjct: 442 --PMDSDFINAIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILFPTMK 488
>gi|269925130|ref|YP_003321753.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269788790|gb|ACZ40931.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 497
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 331/517 (64%), Gaps = 44/517 (8%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
+ +R++K+ +LR G+ PY + RTH+A+ E+Y + + E V+VAGR+ A
Sbjct: 15 QQIRLEKLRKLRDMGINPYPPRSYRTHTAH---EVYSSV-----DSLEGQEVTVAGRLTA 66
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
RR GK F L D SG IQL D K +D+GDI+ +GS RT GE
Sbjct: 67 RRDMGKSVFADLEDASGKIQLLVRLNTAGPDTLSFFKELIDLGDIVEATGSPMRTRTGEP 126
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
+V V S IL K L PLPDK+HGL DV+KRYRQRY+D++ PEV DVF KRAKI+S +R+
Sbjct: 127 TVDVKSVRILAKVLNPLPDKWHGLEDVEKRYRQRYLDLMVNPEVRDVFIKRAKIISSVRR 186
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ LGF+EVETPVLQ GGA A+PF TY+N+L + YLRIATEL+LKR+L+GG EK+Y
Sbjct: 187 YLDDLGFIEVETPVLQPLYGGASAKPFTTYYNALDQTFYLRIATELYLKRLLVGGIEKVY 246
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIG+ FRNEGLST+HNPEFT +E+Y+AY+DY S+M++ E+++T A V L I Y+G
Sbjct: 247 EIGKDFRNEGLSTKHNPEFTMMELYQAYADYNSIMDLVEKLITFTASNVLQTLKITYRGH 306
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI L PWRR + ++V ATGIDF L +D +A+ +R G IE P
Sbjct: 307 EIDLTPPWRRLPLRDVVLNATGIDFYALRDDADLAE--AIRKAG----------IELRPG 354
Query: 423 V--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+++E+ + E +L+QPTFV+DYP+E+SP AK + LTERFE+FI G E+ N
Sbjct: 355 ATRAQMIDELLD-NSEHELIQPTFVIDYPVELSPFAKRKEDNPELTERFEVFIGGMEIGN 413
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQ R + Q+ + + +++ Y D+DF+ AL
Sbjct: 414 AFTELNDPIDQARRFQAQL-----------------TNRTPDGEENPY----DEDFIQAL 452
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+ SIRDVI FP L+
Sbjct: 453 MYGMPPTGGLGIGIDRLVMLLTDRPSIRDVILFPHLR 489
>gi|300087728|ref|YP_003758250.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527461|gb|ADJ25929.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 493
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/529 (45%), Positives = 325/529 (61%), Gaps = 45/529 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
D + R++KV L++ G+ PY + RTH+ E L E+ E V+VA
Sbjct: 4 DSSGIFTERLEKVANLKNAGINPYPNTFHRTHTN---LEALDTLIKAEKDGKEPGVVTVA 60
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GRVV+RR GKL FL +RD S IQL+C + L LK +DIGD +G +G + RT
Sbjct: 61 GRVVSRRDMGKLCFLDIRDSSQKIQLFCSAKNLSESSIFSLKN-LDIGDFVGATGQLIRT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
GE SV ++ VI+ KSL PLP+K+HGL D +KR+RQRY+D+IS PE ++F R I+
Sbjct: 120 RSGEPSVNTSNLVIINKSLQPLPEKWHGLQDTEKRHRQRYLDLISNPEGRNIFITRCSII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
S IR + + GF+EVETPVLQ A GA ARPFVTYHN+L + +YLRIA EL+LKR+L+GG
Sbjct: 180 SGIRNFLNNNGFLEVETPVLQSQACGAAARPFVTYHNALDQSMYLRIALELYLKRLLVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
F+ +YEIGRIFRNEG+S +HNPEFT +E Y+AY+DY MM++TE++V+ + G
Sbjct: 240 FDGVYEIGRIFRNEGISVKHNPEFTMLECYKAYADYNDMMDLTEKMVSGIVEQIYGGYQA 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
Y + + PW R L+ E +G+DF + DGL NK +I
Sbjct: 300 PYGDITLDFTPPWPRLDFRTLLLEKSGVDFLAYSD-------------ADGLRNK---MI 343
Query: 418 ES------SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
ES + G L++E+ +EP LVQP F++DYPIE+SPLAK +G+ ERFE
Sbjct: 344 ESGLEADVAKDKGQLIDELVAQFIEPNLVQPCFLIDYPIELSPLAKTKPGESGIVERFEA 403
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
F G E+ANAFSEL DP +Q R +Q+ E ++DD T
Sbjct: 404 FAHGMEIANAFSELNDPQEQYLRFAQQLE----------------GETQSQTDDTE---T 444
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+D DF+TALEYGMPP G+G+GIDRLVMLLTN SIR+VI FP LK ++
Sbjct: 445 IDRDFITALEYGMPPTGGLGIGIDRLVMLLTNQKSIREVILFPTLKTKE 493
>gi|24379232|ref|NP_721187.1| lysyl-tRNA synthetase [Streptococcus mutans UA159]
gi|397649468|ref|YP_006489995.1| lysyl-tRNA ligase [Streptococcus mutans GS-5]
gi|449863138|ref|ZP_21778069.1| lysyl-tRNA synthetase [Streptococcus mutans U2B]
gi|449872193|ref|ZP_21781401.1| lysyl-tRNA synthetase [Streptococcus mutans 8ID3]
gi|449882808|ref|ZP_21784818.1| lysyl-tRNA synthetase [Streptococcus mutans SA38]
gi|449891054|ref|ZP_21787706.1| lysyl-tRNA synthetase [Streptococcus mutans SF12]
gi|449920577|ref|ZP_21798561.1| lysyl-tRNA synthetase [Streptococcus mutans 1SM1]
gi|449931329|ref|ZP_21802315.1| lysyl-tRNA synthetase [Streptococcus mutans 3SN1]
gi|449951261|ref|ZP_21808609.1| lysyl-tRNA synthetase [Streptococcus mutans 11SSST2]
gi|449959284|ref|ZP_21810117.1| lysyl-tRNA synthetase [Streptococcus mutans 4VF1]
gi|449976351|ref|ZP_21816180.1| lysyl-tRNA synthetase [Streptococcus mutans 11VS1]
gi|449984618|ref|ZP_21819164.1| lysyl-tRNA synthetase [Streptococcus mutans NFSM2]
gi|449996724|ref|ZP_21823699.1| lysyl-tRNA synthetase [Streptococcus mutans A9]
gi|450045791|ref|ZP_21838598.1| lysyl-tRNA synthetase [Streptococcus mutans N34]
gi|450081568|ref|ZP_21851808.1| lysyl-tRNA synthetase [Streptococcus mutans N66]
gi|450115672|ref|ZP_21864043.1| lysyl-tRNA synthetase [Streptococcus mutans ST1]
gi|450126907|ref|ZP_21868401.1| lysyl-tRNA synthetase [Streptococcus mutans U2A]
gi|450131637|ref|ZP_21869598.1| lysyl-tRNA synthetase [Streptococcus mutans NLML8]
gi|450138018|ref|ZP_21871939.1| lysyl-tRNA synthetase [Streptococcus mutans NLML1]
gi|450143820|ref|ZP_21873652.1| lysyl-tRNA synthetase [Streptococcus mutans 1ID3]
gi|450179966|ref|ZP_21886926.1| lysyl-tRNA synthetase [Streptococcus mutans 24]
gi|39932192|sp|Q8DUW8.1|SYK_STRMU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|24377146|gb|AAN58493.1|AE014919_1 lysyl-tRNA synthetase [Streptococcus mutans UA159]
gi|392603037|gb|AFM81201.1| lysyl-tRNA ligase [Streptococcus mutans GS-5]
gi|449151538|gb|EMB55270.1| lysyl-tRNA synthetase [Streptococcus mutans 1ID3]
gi|449153643|gb|EMB57293.1| lysyl-tRNA synthetase [Streptococcus mutans NLML8]
gi|449154658|gb|EMB58223.1| lysyl-tRNA synthetase [Streptococcus mutans 8ID3]
gi|449158673|gb|EMB62085.1| lysyl-tRNA synthetase [Streptococcus mutans 1SM1]
gi|449162867|gb|EMB65988.1| lysyl-tRNA synthetase [Streptococcus mutans 3SN1]
gi|449166450|gb|EMB69388.1| lysyl-tRNA synthetase [Streptococcus mutans 11SSST2]
gi|449169298|gb|EMB72077.1| lysyl-tRNA synthetase [Streptococcus mutans 4VF1]
gi|449175672|gb|EMB78067.1| lysyl-tRNA synthetase [Streptococcus mutans 11VS1]
gi|449180036|gb|EMB82218.1| lysyl-tRNA synthetase [Streptococcus mutans NFSM2]
gi|449182752|gb|EMB84763.1| lysyl-tRNA synthetase [Streptococcus mutans A9]
gi|449199844|gb|EMC00896.1| lysyl-tRNA synthetase [Streptococcus mutans N34]
gi|449215152|gb|EMC15367.1| lysyl-tRNA synthetase [Streptococcus mutans N66]
gi|449227758|gb|EMC27161.1| lysyl-tRNA synthetase [Streptococcus mutans ST1]
gi|449231151|gb|EMC30363.1| lysyl-tRNA synthetase [Streptococcus mutans U2A]
gi|449234466|gb|EMC33472.1| lysyl-tRNA synthetase [Streptococcus mutans NLML1]
gi|449248688|gb|EMC46919.1| lysyl-tRNA synthetase [Streptococcus mutans 24]
gi|449250453|gb|EMC48512.1| lysyl-tRNA synthetase [Streptococcus mutans SA38]
gi|449256919|gb|EMC54730.1| lysyl-tRNA synthetase [Streptococcus mutans SF12]
gi|449265121|gb|EMC62448.1| lysyl-tRNA synthetase [Streptococcus mutans U2B]
Length = 496
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 337/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|449898366|ref|ZP_21790567.1| lysyl-tRNA synthetase [Streptococcus mutans R221]
gi|449259882|gb|EMC57398.1| lysyl-tRNA synthetase [Streptococcus mutans R221]
Length = 496
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALAEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLTN+ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNTTTIRDVLLFPTMK 496
>gi|373455466|ref|ZP_09547298.1| lysine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371934825|gb|EHO62602.1| lysine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 646
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/536 (44%), Positives = 336/536 (62%), Gaps = 44/536 (8%)
Query: 44 TRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN 103
+N+ S +D+ +R +K++++R+ G+EPY K++ H A +++
Sbjct: 4 NKNQNTQHSGPKLNDQMIIRR---EKLDKIRALGVEPYGQKFEWDHHAADIRK------E 54
Query: 104 GEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVD 163
E+ + HV +AGR++ RR GK AF LRD +G IQ+Y +++ L +++ K+ VD
Sbjct: 55 AEQLEKDETHVRIAGRIMIRRGQGKTAFCVLRDQTGDIQVYFKRDELPENEWALFKL-VD 113
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
IGDILG+ G++ T GEL+V V F +L+KSL PLP+K+HGLTD ++RYRQRY+D+I
Sbjct: 114 IGDILGIEGTVFTTHTGELTVRVLHFTMLSKSLRPLPEKWHGLTDKEQRYRQRYLDLIMN 173
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
PEV + F KRA ++S IRK GF+EVETPVLQ GGA A+PF T+ N+L +YLR
Sbjct: 174 PEVRETFVKRAAMMSAIRKWYTDHGFLEVETPVLQPLYGGANAKPFTTHFNALDMTMYLR 233
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IA EL+LKR+L+GG+E+I+EI R FRNEG+ TRHNPEFT IE Y+AY D + ++N TE+I
Sbjct: 234 IAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNPEFTAIETYQAYGDIEDVINQTEQI 293
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLR 403
V CA+A G + Y+ EI + PW R TM VK+ TG DF+ +
Sbjct: 294 VAACAMASYGSMKFTYEDTEIDVTPPWPRLTMAEAVKKYTGEDFD------------ACQ 341
Query: 404 ALGDGLENKDKFVIESS--PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
+ D DK +E G +L+E F+ VE L+QP + +PIE+SPL+K +
Sbjct: 342 TIEDARAIADKLHVEYGEYDGFGKILSECFDAYVEEHLIQPVHITKHPIEVSPLSKLDPK 401
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
T RFE +I GRE+AN FSEL DP+DQR R E QV E+ K
Sbjct: 402 DPRYTIRFESYIYGRELANGFSELNDPIDQRKRFELQV------------------EERK 443
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DD ++ + D+DF+TALEYGMPP G+G+G+DRL ML+TNSASIRDV+ FP +K
Sbjct: 444 HGDDEAHPI--DEDFLTALEYGMPPTGGLGIGLDRLFMLMTNSASIRDVLLFPAMK 497
>gi|306821054|ref|ZP_07454672.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550890|gb|EFM38863.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 500
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 340/516 (65%), Gaps = 44/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR K+ ++++G +P+ K+D+TH + Q+++ + N E VSVAGR+++
Sbjct: 14 LRYDKLVRMQNEGRDPFKIEKFDQTHHSKQIKDDF--------ENFEGKEVSVAGRMMSF 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R+FGK F+ ++D G IQ Y +K+ L + + K F DIGDI+GV+G + +T+K E+S
Sbjct: 66 RSFGKSTFVDVQDKDGKIQCYAKKDELGEELYKAFKEF-DIGDIIGVTGVVFKTQKDEIS 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ ++ +L+KSL LP+KYHGL D+D RYRQRYVD+I PEV + F R K + +R+
Sbjct: 125 IKMHDVKLLSKSLRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKALREF 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGFEK+YE
Sbjct: 185 LEQREFIEVETPILNTIAGGATARPFITHHNTLDIDMYLRIANELYLKRLIVGGFEKVYE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ +HNPE+T +E+Y+AY+DY+ +M +TEE+V + A+A G I+YQG +
Sbjct: 245 MGRMFRNEGMDIKHNPEYTAMELYQAYADYEDIMKLTEELVAYMAVAATGSTLINYQGKQ 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L+ PWRR +M + +KE IDF ++ D + +E K IE P +
Sbjct: 305 IDLKPPWRRLSMTDAIKEYANIDFEDIKTD------------EEAVELARKHNIEIIPEM 352
Query: 424 --GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
G+++ +FE E KL+ PTF+ +P+EISPL+K + +T RFE F+ E+ANA
Sbjct: 353 KRGHVIAGIFEKYCEDKLINPTFITHHPVEISPLSKRNPEDPRITNRFEAFVNTWEIANA 412
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQRAR +Q+RQ +E D ++ LD+DF+ A+E
Sbjct: 413 FSELNDPIDQRARFMDQLRQ-------------------RELGDEEAQM-LDEDFLNAIE 452
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 453 VGLPPTGGLGIGIDRVIMLLTNSASIRDVILFPTMK 488
>gi|404330835|ref|ZP_10971283.1| lysyl-tRNA ligase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 498
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/515 (45%), Positives = 334/515 (64%), Gaps = 38/515 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K+ L KG+ P+ ++ RTH +++++Y + EE + HV AGR++A+R
Sbjct: 14 RREKLRVLMDKGINPFGGRFVRTHDTKKIRDLYSAMTE-EELEEKAVHVVTAGRLMAKRR 72
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D G IQLY K+ + + ++ K +DIGD +GV G++ +T GELS+
Sbjct: 73 KGKAGFADIQDFEGRIQLYVRKDNVGDETYEIFK-HIDIGDFVGVEGTVFKTRMGELSIR 131
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V F IL+KSL PLPDK+HGL DV++RYRQRY+D+I PEV F R+KIV IR ++
Sbjct: 132 VVKFNILSKSLRPLPDKFHGLKDVEQRYRQRYLDLIVNPEVRKTFVLRSKIVKTIRDYLD 191
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
++EVETP +Q GGA ARPF+T+HN+L DLYLRIA ELHLKR++IGGFEK+YEIG
Sbjct: 192 DQQYLEVETPTMQSIPGGAAARPFITHHNALNIDLYLRIAIELHLKRLIIGGFEKVYEIG 251
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R++RNEG+ T+HNPEFT +E+Y AY D + +M +TE+++ V G I Y G I
Sbjct: 252 RVYRNEGVDTKHNPEFTLLELYAAYDDLRDIMALTEDLIVSVTRKVLGTTQITYDGNPID 311
Query: 366 LERPWRRETMHNLVKEATGID-FNELGNDL--KVAKETTLRALGDGLENKDKFVIESSPS 422
L+ W R M + +KEATG+D + E+ ++ K+A++ +R ++++ S
Sbjct: 312 LKPGWHRIHMVDAIKEATGVDLWPEMTDEQARKLAEDNGVR-------------VDANMS 358
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++NE FE VE L+QPTF+ +PIEISPLAK ++RFEL+I G E ANAF
Sbjct: 359 YGHVVNEFFEQKVEDTLIQPTFIFGHPIEISPLAKKDPHDQRFSDRFELYIAGGEQANAF 418
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R EEQ+R+ R A E +D+DF+ A+EY
Sbjct: 419 SELNDPIDQRERFEEQMRE----REAGNDEAQ----------------VIDEDFLEAMEY 458
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL+MLLT+S SIRDV+ FP++K
Sbjct: 459 GMPPTGGLGIGIDRLIMLLTDSPSIRDVLLFPLMK 493
>gi|450101670|ref|ZP_21859139.1| lysyl-tRNA synthetase [Streptococcus mutans SF1]
gi|450170617|ref|ZP_21883581.1| lysyl-tRNA synthetase [Streptococcus mutans SM4]
gi|449219893|gb|EMC19835.1| lysyl-tRNA synthetase [Streptococcus mutans SF1]
gi|449245515|gb|EMC43850.1| lysyl-tRNA synthetase [Streptococcus mutans SM4]
Length = 496
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 337/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHTATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|160881676|ref|YP_001560644.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|160430342|gb|ABX43905.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 503
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/529 (44%), Positives = 339/529 (64%), Gaps = 42/529 (7%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNS 109
++ + D + ++++K+ +L+ G +P+ K+D TH +++ + +L
Sbjct: 11 QNANNAQDVNELIKVKMQKLADLQEAGKDPFQIMKYDVTHHTIDVKDNFENL-------- 62
Query: 110 ENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILG 169
E V++AGR++ +R GK +F+ ++D G IQ Y +++ + +++ K F DIGDI+G
Sbjct: 63 EGQIVAIAGRIMTKRVMGKASFINIQDKLGNIQSYIQRDSIGEEEYAGFKKF-DIGDIVG 121
Query: 170 VSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADV 229
+ G + +T GE+SV N ++L+K L LP+K+HGLTD D RYRQRYVD++ PEV +
Sbjct: 122 IKGEVFKTHAGEISVRANEILLLSKCLQVLPEKFHGLTDTDTRYRQRYVDLMMNPEVKET 181
Query: 230 FRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELH 289
F KR+ I+ EIR ++ F+EVETPVL AGGA ARPF+T+HNSL DL LRI+ EL+
Sbjct: 182 FIKRSAIIREIRNYLDGEDFIEVETPVLVKNAGGAAARPFMTHHNSLDEDLNLRISLELY 241
Query: 290 LKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCAL 349
LKR+++GG E++YEIGR+FRNEGLS RHNPEFT +E+Y+AY+DY MM++TE++ A
Sbjct: 242 LKRLIVGGLERVYEIGRVFRNEGLSVRHNPEFTLLELYQAYTDYNGMMDLTEKLFRTVAE 301
Query: 350 AVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGL 409
V G I Y+GVEI L +P+ R TM VK+ GIDF++ V E +AL
Sbjct: 302 KVIGTTKISYEGVEIDLGKPFERITMVEAVKKYKGIDFDQ------VKTEEEAKALA--- 352
Query: 410 ENKDKFV-IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
K+ V E G++L+ FE VE L+QPTFV+D+P+EISPL K + TER
Sbjct: 353 --KEHHVSFEDRHKKGDILSLFFEEFVEEHLIQPTFVIDHPVEISPLTKKKPENPEYTER 410
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELF+ REMANA+SEL DP+DQR R AQE LK + D
Sbjct: 411 FELFVTKREMANAYSELNDPIDQRERF-------------------VAQEALKAAGDEEA 451
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+DF+ AL YGMPP G+G+GIDRLVMLLT+S++IRDV+ FP +K
Sbjct: 452 N-SMDEDFLNALAYGMPPTGGIGIGIDRLVMLLTDSSAIRDVLLFPTMK 499
>gi|150392206|ref|YP_001322255.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
gi|149952068|gb|ABR50596.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
Length = 499
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/516 (46%), Positives = 333/516 (64%), Gaps = 44/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K++ L+ G +P+ K TH + Q+QE + L E V++AGR++A+
Sbjct: 13 IRREKLKYLQDSGQDPFKIEKVHITHYSEQIQEDFEAL--------EGQKVTIAGRMMAK 64
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F+ ++D G IQ+Y ++++ + +L V D GDIL + G + +T KGE+S
Sbjct: 65 RGHGKASFINIQDKDGRIQVYVREDKIGEKAY-ELFVTYDRGDILEIQGEIFKTNKGEVS 123
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +LTKSL LP+K+HGL D D RYRQRYVD+I PEV F R++ + IR
Sbjct: 124 VKALEVKLLTKSLQVLPEKWHGLKDQDLRYRQRYVDLIVNPEVKKTFMVRSRAIKSIRSF 183
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETP+L AGGA A+PF T+HN+LG D+YLRIATELHLKR+++GG +++YE
Sbjct: 184 LDDRGYIEVETPILDTIAGGASAKPFTTHHNTLGIDMYLRIATELHLKRLIVGGLDRVYE 243
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+S +HNPEFTTIE+YEAY+DY+ MM+ITE IV H A G I YQG E
Sbjct: 244 IGRLFRNEGMSIKHNPEFTTIELYEAYADYKDMMDITENIVAHVAENALGTTKITYQGTE 303
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L PWRR +M + KE +DF+E+ D + +E K +E P +
Sbjct: 304 IDLTPPWRRISMTDSCKEYADVDFSEIKTD------------EEAIELAKKLGLEVRPGM 351
Query: 424 --GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
G+++NEVFE VE L+QPTF+ +P+E+SPLAK + + +T RFE F+ E+ANA
Sbjct: 352 KKGHVINEVFETFVEKHLMQPTFITHHPVEVSPLAKRNPDNPEITNRFEAFVNTWEIANA 411
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQRAR EQ+ Q R A DD ++ LD+DF+ ALE
Sbjct: 412 FSELNDPIDQRARFMEQLVQ----REAG--------------DDEAH--MLDEDFLNALE 451
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+GIDRL+MLLT+S SIRDV+ FP +K
Sbjct: 452 VGLPPTGGLGIGIDRLMMLLTDSPSIRDVLLFPTMK 487
>gi|404497215|ref|YP_006721321.1| lysyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418066623|ref|ZP_12703983.1| lysyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|78194818|gb|ABB32585.1| lysyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373560116|gb|EHP86388.1| lysyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 491
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 330/513 (64%), Gaps = 36/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +KV+ L G+ PY + H++ + Y EE D VAGR++ARR+
Sbjct: 11 RRRKVDALWEAGINPYPNDYKPRHTSADVVAAYGKCEIIEEGA---DPFVVAGRIIARRS 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF+ L+D G IQLY K+ L + ++ + F DIGDI+G +G+ RT+ GELS+
Sbjct: 68 FGKAAFVQLQDRKGRIQLYVRKDTLGDEAYEAFESF-DIGDIIGATGTPFRTKTGELSLN 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+ +LTKS LPLP+K+HGLTDV+ RYRQRYVD+I PEV +VF KR++IV+ IR+ +
Sbjct: 127 ASEVRLLTKSFLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFIKRSRIVNLIREFMV 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
F+EVETP++Q GGA ARPFVT+HN+L +L+LRIA EL+LKR+++GGFE+++EI
Sbjct: 187 RHDFLEVETPMMQPIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVGGFERVFEIN 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y+AY+ ++ +M+ TEE++ H V G L YQGVEI
Sbjct: 247 RNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVTQEVLGTLDFTYQGVEIS 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGN-DLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+RPW+R T+ + E ID L + DL A ++ GL+ + + G
Sbjct: 307 FQRPWKRLTVKEAILEYGDIDAKSLEDRDLAYAYARSI-----GLD------LPTDVGYG 355
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L+ E+FE V E KL+QPTF+ YP E+SPL++ + + +RFE F GREMANAFSE
Sbjct: 356 KLITEIFEEVAEVKLIQPTFITAYPTEVSPLSRKSDKDPDIVDRFEFFCAGREMANAFSE 415
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R QV Q K K ++ Y +D+D++ ALEYGM
Sbjct: 416 LNDPVDQKERFLGQVAQ-----------------KAKGDEEAHY---MDEDYIRALEYGM 455
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G G+GIDRLVMLLT+S SIRDVI FP L+
Sbjct: 456 PPTAGEGIGIDRLVMLLTDSPSIRDVILFPQLR 488
>gi|171780089|ref|ZP_02920993.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281437|gb|EDT46872.1| lysine--tRNA ligase [Streptococcus infantarius subsp. infantarius
ATCC BAA-102]
Length = 496
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 334/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTK-EELHEINKTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GEL++
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKK-ADLGDFLGIEGEIMRTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+S IR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISGIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPFVT+HN+ D+ LRIA ELHLKR+++GG EK+YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFVTHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFT IE+YEAY+D++ +M+ITE I+ + + AVNG I YQG EI
Sbjct: 253 GRVFRNEGMDATHNPEFTMIELYEAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+++P++R M + +KE TG+DF KE TL + + K+ V + SVG
Sbjct: 313 AIDQPFKRIHMVDAIKEVTGVDF---------WKEMTLEEAQELAKEKNVPVEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E NA+SE
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDTRFTDRFELFIMTKEYGNAYSE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + V D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEATGV--DYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRD + FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDALLFPTMK 496
>gi|449980383|ref|ZP_21817159.1| lysyl-tRNA synthetase [Streptococcus mutans 5SM3]
gi|449176995|gb|EMB79315.1| lysyl-tRNA synthetase [Streptococcus mutans 5SM3]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 337/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYIRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTD++ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDIETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|422847041|ref|ZP_16893724.1| lysine--tRNA ligase [Streptococcus sanguinis SK72]
gi|325687234|gb|EGD29256.1| lysine--tRNA ligase [Streptococcus sanguinis SK72]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 337/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKY-NAKDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAA-------ALAQEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D DFV ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|116871612|ref|YP_848393.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123460668|sp|A0AF28.1|SYK_LISW6 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|116740490|emb|CAK19610.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 498
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 334/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATDFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M ++VKE G+DF + +D + A+E L K I + G
Sbjct: 313 DLTPNWRRVHMADVVKEYVGVDFWNVTSD-EEARE---------LAKKHDVAITEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGVDRLVMLLTDAPSIRDILLFPTMK 495
>gi|154499801|ref|ZP_02037839.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
29799]
gi|150271399|gb|EDM98656.1| lysine--tRNA ligase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/514 (45%), Positives = 336/514 (65%), Gaps = 38/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K++EL+ G++P+ K+ T + ++++ + + E VSVAGR++++
Sbjct: 21 IRRDKLKELQDAGMDPFQQTKYSVTAHSQEIKDNFETM--------EGQTVSVAGRLMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F L+D G IQLY + L + F + K VDIGDI+GV G RT++GE+S
Sbjct: 73 RGMGKAVFCDLQDAQGRIQLYVRIDELGEEPFARFKK-VDIGDIVGVEGEAFRTKRGEIS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V N +L+KSL PLP+K+HGLTD + RYRQRYVD++ PEV F R++ + +R
Sbjct: 132 VKANKVTLLSKSLRPLPEKFHGLTDKETRYRQRYVDLMVNPEVKRNFVVRSRFIQFMRSY 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++++G++EVETPVL AGGA ARPF+T+HN+L D+Y+RIATEL LKR+++GG +++YE
Sbjct: 192 LDNMGYIEVETPVLNTIAGGAAARPFITHHNTLDIDMYMRIATELPLKRLIVGGMDRVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGRIFRNEG+ +HNPEFTT+E+Y+AY+D+ MM+I E I++ A ++ G +++QG +
Sbjct: 252 IGRIFRNEGMDPKHNPEFTTVELYQAYTDFHGMMDIAEGILSGAAQSILGTYEVEWQGEK 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L WRR TM + VKE G+DF + +D + + + E DK +
Sbjct: 312 LNLAPGWRRLTMVDAVKEYAGVDFGAITDDAEAVAAAKAIGV-ELAETADK-------TW 363
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
GN L F+ VE +L+QPTF+ YP+E+SPL K + LTERFELF+C E+ANA+S
Sbjct: 364 GNALYACFDQKVEEQLIQPTFITMYPVEVSPLTKRSPQDPRLTERFELFVCHSELANAYS 423
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR+R E+Q+ +L+E D E+ LD+DF+TALEYG
Sbjct: 424 ELNDPIDQRSRFEKQL-------------------ELRERGDEETEM-LDEDFLTALEYG 463
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP GMG+GIDR VM+LTN+ +IRDVI FP +K
Sbjct: 464 MPPTGGMGMGIDRCVMMLTNADTIRDVILFPTMK 497
>gi|347524867|ref|YP_004831615.1| lysyl-tRNA synthetase [Lactobacillus ruminis ATCC 27782]
gi|345283826|gb|AEN77679.1| Lysyl-tRNA synthetase [Lactobacillus ruminis ATCC 27782]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 334/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR ++P+ ++++R +L E Y + + EE N ++ V++AGR+VA+R
Sbjct: 13 VRREKMQELRDASIDPFGHRFERDSMNQELHEKYGDM-DKEELNDKDIIVTIAGRMVAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G +QLY K+ + D + K D+GD LG++G + +T+ GEL+V
Sbjct: 72 GKGKVGFADLQDKTGRMQLYIRKDEVGEDMYHIFKR-SDLGDFLGITGQVIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V L+K+L PLPDKYHGL D+++ YRQRY+D+I+ E + F R++IV+ IR+ +
Sbjct: 131 KVTKLTFLSKALRPLPDKYHGLQDIEQIYRQRYLDLITNRESYNRFVNRSRIVTAIRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DGNGFLEVETPVLHTQAGGASARPFITHHNALDIELYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY D++ +M+ TE I A V+ + YQG E+
Sbjct: 251 GRVFRNEGIDTHHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVSDNSIVTYQGTEV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
++P++R M +L+KE TG+DF KE T+ + ++ ES VG
Sbjct: 311 NFDKPFKRAHMVDLIKEYTGVDF---------WKEMTVEE-ARKIADEHGVHYESYWKVG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE E K+V PTFV +P+EISPLAK + T+RFEL+I G E ANAF+E
Sbjct: 361 HIINEFFEEFCEDKIVDPTFVYGHPVEISPLAKKNADDPRFTDRFELYILGGEYANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV E+R A E +D+D++ A+EYGM
Sbjct: 421 LNDPIDQRQRFEAQV----EERKAGNDEAEG----------------IDEDYIEAMEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP +K
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAESIRDVLLFPTMK 493
>gi|399889900|ref|ZP_10775777.1| lysyl-tRNA ligase [Clostridium arbusti SL206]
Length = 507
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 331/516 (64%), Gaps = 37/516 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K+ +L++ G +P+ Y +RTH++ Q++E Y L E V+VAGR++++R
Sbjct: 26 RRQKLSDLQAAGKDPFDVYTVERTHTSEQVKENYDEL--------EGKTVTVAGRLMSKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + + ++ + F DIGD + ++G + +T+ GE+S+
Sbjct: 78 VHGKAGFSDIHDRYGKIQLYIKIDDVGEEKIKFYRTF-DIGDFVSITGRVFKTKTGEVSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +L+KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ IR+ +
Sbjct: 137 HIIDFELLSKSLKPLPEKFHGLKDPDLRYRQRYVDLIINQDVRDTFFKRTAIIRSIREFL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ ++EVETP+L AGGA ARPF T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 197 DNREYLEVETPILSPIAGGAAARPFDTHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + V G + YQG EI
Sbjct: 257 GKNFRNEGIDVRHNPEFTMIELYEAYADYNDMMKITENMVAYVCEKVLGTTKVTYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
PWRR TM + VKE G+DFN++ D + + L + +D + G
Sbjct: 317 DFTPPWRRITMVDAVKEYAGVDFNKISTDEEARTVAKEKGLELKKKLED-------CTKG 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE+FE E K++QPTFV DYP+EISPL K R + TERFE FI GRE+ NA+SE
Sbjct: 370 DVLNELFEAYGEEKMIQPTFVCDYPVEISPLTKKKRGNEAFTERFEGFIYGRELCNAYSE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ Q+ R +Q+R+ + DD +Y +DDDF+ ALE GM
Sbjct: 430 LNDPIVQKDRFVQQLRER------------------ELGDDEAY--MMDDDFINALEIGM 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRL+M LT++ SIRDVI FP +K Q
Sbjct: 470 PPTGGLGIGIDRLIMFLTDAYSIRDVILFPTMKPMQ 505
>gi|313889970|ref|ZP_07823607.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
gi|313121628|gb|EFR44730.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/530 (45%), Positives = 339/530 (63%), Gaps = 36/530 (6%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
++ + +D+E VR +K+ L KG++P+ +++RT ++ QL+ Y E+ +
Sbjct: 2 SNQHTEELNDQEIVRR---EKMMALAEKGIDPFGKRFERTANSGQLKAKYAE-KTKEDLH 57
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
N+ +AGR++ +R GK+ F ++D G IQ+Y K+ + + +D K D+GD L
Sbjct: 58 DLNEKAVIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGDENYDIFKK-ADLGDFL 116
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D+IS E +
Sbjct: 117 GVEGEIMRTDMGELSIKATHLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFN 176
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R++I+SEIR+ ++S F+EVETPVL AGGA ARPF+T+HN+ D+ LRIATEL
Sbjct: 177 RFVTRSRIISEIRRYLDSKDFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATEL 236
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GG E++YEIGRIFRNEG+ HNPEFT+IE+YEAY+D+Q +MN+TE I+ H A
Sbjct: 237 HLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYEAYADFQDIMNLTEGIIQHAA 296
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
AV G+ IDYQG I + P++R M + +KE TGIDF KE +
Sbjct: 297 KAVTGEGPIDYQGQLIHINEPFKRLHMVDAIKEVTGIDF---------WKEMSFEEARTL 347
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+ K + +VG+++N FE VE L+QPTFV +P+E+SPLAK + A T+R
Sbjct: 348 AQEKHVPLEAHFTTVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDARFTDR 407
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHS 527
FELFI +E ANAF+EL DP+DQ +R E AQ K KE DD +
Sbjct: 408 FELFIMTKEYANAFTELNDPIDQLSRFE-------------------AQAKAKELGDDEA 448
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRL MLLTN+ SIRDV+ FP +K
Sbjct: 449 --TGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVLLFPTMK 496
>gi|373464520|ref|ZP_09556057.1| lysine--tRNA ligase [Lactobacillus kisonensis F0435]
gi|371762375|gb|EHO50909.1| lysine--tRNA ligase [Lactobacillus kisonensis F0435]
Length = 501
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 330/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR +G++P+ +++ R+H A QL E + + ++ ++ V+VAGR++A+R
Sbjct: 13 VRRQKMDELREEGIDPFGHRFVRSHLAQQLHEEFDGF-DKDDLMEQDKKVTVAGRMIAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G IQ+Y K+ + D + K DIGD LG++G + +T GEL+V
Sbjct: 72 GKGKVGFADLKDRTGKIQIYVRKDIVGEDIYHIFKR-SDIGDHLGITGQIIKTVMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDKYHGL D ++RYRQRY+D+IS + D F KR+KI+S IR +
Sbjct: 131 RAESVTFLSKALRPLPDKYHGLKDKEQRYRQRYLDLISNQDSFDRFHKRSKIISAIRSYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S ++EVETP L AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DSNDYLEVETPFLHNQAGGANARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I+ A +V + YQG I
Sbjct: 251 GRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGILKAAAASVTDDNVVTYQGHTI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L +P++R+ M + +KE TGIDF + +D K L ++ E G
Sbjct: 311 DLNKPFKRQHMVDAIKEVTGIDFWKPMSDEDAKK----------LADEHHVHYEKWWKTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE V+ L QPTF+ +P+EISPLAK + T+RFEL+I G E ANAFSE
Sbjct: 361 HIINAFFEEKVQDTLEQPTFIYGHPVEISPLAKRNHDDPRFTDRFELYIVGNEFANAFSE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E QV++ E A +D+D+V ALEYGM
Sbjct: 421 LNDPIDQKQRFEAQVKERQEGNDEAEG--------------------IDEDYVEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDVI FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVILFPTMR 493
>gi|450005458|ref|ZP_21826666.1| lysyl-tRNA synthetase [Streptococcus mutans NMT4863]
gi|449188534|gb|EMB90241.1| lysyl-tRNA synthetase [Streptococcus mutans NMT4863]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 338/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + QV +A+E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQV---------------AAKEL---GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|416852198|ref|ZP_11909343.1| lysine--tRNA ligase [Streptococcus pseudoporcinus LQ 940-04]
gi|356739687|gb|EHI64919.1| lysine--tRNA ligase [Streptococcus pseudoporcinus LQ 940-04]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/532 (45%), Positives = 344/532 (64%), Gaps = 40/532 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
++ + +D+E VR +K+ L KG++P+ +++RT ++ QL+ Y E+ +
Sbjct: 2 SNQHTEELNDQEIVRR---EKMMALAEKGIDPFGKRFERTANSGQLKAKYAE-KTKEDLH 57
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
N+ +AGR++ +R GK+ F ++D G IQ+Y K+ + + +D K D+GD L
Sbjct: 58 DLNEKAVIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGDENYDIFKK-ADLGDFL 116
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D+IS E +
Sbjct: 117 GVEGEIMRTDMGELSIKATHLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFN 176
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R++I+SEIR+ ++S F+EVETPVL AGGA ARPF+T+HN+ D+ LRIATEL
Sbjct: 177 RFVTRSRIISEIRRYLDSKDFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATEL 236
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GG E++YEIGRIFRNEG+ HNPEFT+IE+YEAY+D+Q +MN+TE I+ H A
Sbjct: 237 HLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYEAYADFQDIMNLTEGIIQHAA 296
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
AV G+ IDYQG I + P++R M + +KE TGIDF K RAL
Sbjct: 297 KAVTGEGPIDYQGQLIHINEPFKRLHMVDAIKEVTGIDF------WKEMSFEEARALA-- 348
Query: 409 LENKDKFV-IESS-PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
++K V +E+ +VG+++N FE VE L+QPTFV +P+E+SPLAK + A T
Sbjct: 349 ---QEKHVPLEAHFTTVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDARFT 405
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDD 525
+RFELFI +E ANAF+EL DP+DQ +R E AQ K KE DD
Sbjct: 406 DRFELFIMTKEYANAFTELNDPIDQLSRFE-------------------AQAKAKELGDD 446
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +D D+V ALEYGMPP G+G+GIDRL MLLTN+ SIRDV+ FP +K
Sbjct: 447 EA--TGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVLLFPTMK 496
>gi|389819124|ref|ZP_10209165.1| lysyl-tRNA synthetase [Planococcus antarcticus DSM 14505]
gi|388463539|gb|EIM05891.1| lysyl-tRNA synthetase [Planococcus antarcticus DSM 14505]
Length = 494
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 337/513 (65%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R G++P+ +++RTH + ++ E Y L+ EE V +AGRV+ +R
Sbjct: 11 VRRQKMQAFRDHGMDPFGGRFERTHLSQEIIEQYGELSK-EELEETPHEVIIAGRVMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ ++ D+ + VD+GDILG+ G + +T GELS+
Sbjct: 70 GKGKAGFAHIQDLKGQIQIYVRKD-VIGDEAYEFYNTVDLGDILGIKGIVFKTNVGELSI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
LTK+L PLP+K+HGL DV++RYRQRY+D+++ + F R++I+ +R+ +
Sbjct: 129 KAKEVEFLTKALRPLPEKFHGLKDVEQRYRQRYLDLLTSEGSKETFILRSRIIQSMRRYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 DNAGFLEVETPMLHSIAGGAAAKPFITHHNALDMELYIRIAIELHLKRLIVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E+YEAY+DY +M +TE +V H A V G T+ Y +I
Sbjct: 249 GRVFRNEGISTRHNPEFTMLELYEAYADYNDIMALTENLVAHIAQEVLGTTTVQYGEDQI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R M + VKE TG++F + ++ KE L + I + VG
Sbjct: 309 DLAVGWKRLHMADAVKEYTGVNFWK-----QMTKEE-----AQALAKEHNVEIRPTMEVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE +LVQPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 359 HILNEFFEQKVEEQLVQPTFIYGHPVEISPLAKKNSEDDRFTDRFELFIVRREHANAFTE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E A + EKS E +D ++E +D+DF+ ALEYG+
Sbjct: 419 LNDPIDQRQRFE-----------AQLIEKS-------EGNDEAHE--MDEDFIEALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL+MLLTNS+SIRDV+ FP ++
Sbjct: 459 PPTGGLGIGIDRLIMLLTNSSSIRDVLLFPQMR 491
>gi|402570724|ref|YP_006620067.1| lysyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402251921|gb|AFQ42196.1| lysyl-tRNA synthetase (class II) [Desulfosporosinus meridiei DSM
13257]
Length = 496
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 342/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K+E LR +EPYA ++ RTH +++ E + L E VS+AGR++++R
Sbjct: 10 IRLEKLEMLRQADIEPYADRYVRTHKTSEILEHFEEL--------EGQEVSIAGRIMSKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +G +Q+Y + L FD + F D+GDI+GV G + RT++GE+S+
Sbjct: 62 DQGKVIFTHVQDLNGRLQIYIRMDELGQTMFDLISKF-DVGDIIGVKGKVFRTKRGEISI 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
++L+K++ PLP+K+HGLT+V+ RYR+RY+D++ P+V VF R+KI+ +R+ +
Sbjct: 121 HAVEVLLLSKAMRPLPEKFHGLTNVETRYRRRYLDLVMNPDVRQVFVTRSKIIRYMREFL 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E F+EVETP L GGA ARPF+T+HN+L DLYLRIA EL LKR+++GG EK+YEI
Sbjct: 181 EEREFLEVETPTLHTIPGGAAARPFITHHNTLDMDLYLRIALELPLKRLIVGGLEKVYEI 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+S +HNPEFT +E+Y+A+++Y+ +M +TEE++ H V+G I YQG +
Sbjct: 241 GRTFRNEGISIKHNPEFTMMELYQAFANYEDIMELTEEMIAHIVQKVHGTTEITYQGQPL 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PW+R M + + E +G+DF E+ D ++ +A G+ +++ S G
Sbjct: 301 EFKTPWKRLPMLDGILEYSGVDFREIITD----EQARDKAREKGIH------VQADASRG 350
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++NE FE VEP L+QPTF++ +P+EISPLAK + + T+RFE FI GRE+ANAFSE
Sbjct: 351 KIINEFFEAFVEPNLIQPTFIIGHPVEISPLAKRNAKQPEYTDRFEAFIFGRELANAFSE 410
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q A E+ K DD ++ +D+DFV ALEYG+
Sbjct: 411 LNDPIDQRQRFEAQ-----------------AAERAK-GDDEAH--IMDEDFVQALEYGL 450
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+SASIRDVI FP ++
Sbjct: 451 PPTGGLGIGIDRLVMLLTDSASIRDVILFPTMR 483
>gi|325294994|ref|YP_004281508.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065442|gb|ADY73449.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 512
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/525 (45%), Positives = 348/525 (66%), Gaps = 43/525 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN---DHVSVAGRVVA 122
R +K+E L+ G EPYAYK++ T +A +L + + GE+ E + S+AGR+V+
Sbjct: 10 RKEKIERLKELGYEPYAYKYEVTTTAKELLDKFGRHKEGEDKEKEQLPEEEFSLAGRIVS 69
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQL-KVFVDIGDILGVSGSMKRTEKGE 181
R GK AF ++D + IQ Y ++ + + ++++ K +DIGDI+GV G + RT GE
Sbjct: 70 MRVMGKAAFFHIQDGTEKIQCYVRRDLVGEEFYNKIFKKLIDIGDIVGVKGKLFRTRTGE 129
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L++ +LTKSL PLP+K+HGLTDV+KRYRQRY+D+I P+V ++FR R KI+ ++R
Sbjct: 130 LTLETFQITLLTKSLRPLPEKWHGLTDVEKRYRQRYLDLIVNPQVREIFRTRTKIIKKLR 189
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++S GF+EVETP+LQ A GA A+PF+T++N+L D+YLRIA EL+LKR+L+GGFE++
Sbjct: 190 EFLDSKGFMEVETPILQPIASGAAAKPFITHYNALDIDVYLRIAPELYLKRLLVGGFERV 249
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK--LTIDY 359
YE+G+ FRNEG+STRHNPEFT +E Y AY+DY +M +TEE+ + + GK I+Y
Sbjct: 250 YELGKNFRNEGISTRHNPEFTMVEFYMAYADYNDLMELTEELFEYLLDEIFGKGAREIEY 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGND----LKVAKETTLRALGDGLENKDKF 415
QG ++ +RP+RR + + + T + +EL +D L+ AKE G+EN +K
Sbjct: 310 QGTKLSFKRPFRRISYLEELSKKTSLTEDELLHDEEKVLEKAKEV-------GVENAEKL 362
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
S + E+FE ++EP+L+QPTFV+D+P ISPLAK R + L ERFELFI G
Sbjct: 363 ------SHFKRVQELFEALIEPELIQPTFVIDFPKAISPLAKEKRGNPELVERFELFIFG 416
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE+ANA++EL +P +Q AR +Q+ +EK K DD + E D D
Sbjct: 417 REIANAYTELNNPEEQEARFRQQL-----------------EEKAK-GDDEAMEY--DAD 456
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
F+TALEYGMPP +G G+GIDRLVML T+ SIR+V+ FP L+ ++
Sbjct: 457 FITALEYGMPPTAGEGIGIDRLVMLFTDKDSIREVLLFPQLRPEK 501
>gi|222099867|ref|YP_002534435.1| lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
gi|221572257|gb|ACM23069.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
Length = 502
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/512 (46%), Positives = 337/512 (65%), Gaps = 35/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
RI++++ELRS +EPY Y++++ SA++++E Y HL GE SE +S AGRV++ R
Sbjct: 9 RIREIQELRSMNIEPYPYRFEKEMSASEIKEKYDHLQAGEVQESEK--LSFAGRVMSIRH 66
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK AF L+DD+G IQ Y + + D+ K V IGD +GV G +++ GEL++
Sbjct: 67 HGKTAFFHLKDDTGRIQAYIRADAVGKDRMGLFKKHVKIGDFVGVRGFPFKSKTGELTIY 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V F +L+K+L PLP+K+HG+ D + YRQRY+++I E + F+KR + + IR+ +
Sbjct: 127 VEDFTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIMSDEAIERFKKRFEAMRVIREFLN 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GFVEVETP+L GGAEARPFVT+ N D+YLRIA EL+LKR+++GGFEKIYEIG
Sbjct: 187 SRGFVEVETPILHYVTGGAEARPFVTHLNVFDVDMYLRIAPELYLKRLIVGGFEKIYEIG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
+ FRNEG+S +H+PEFT+IE+Y+AY+DY MMN+TEE++ G L I YQG EI
Sbjct: 247 KNFRNEGISYKHSPEFTSIEIYQAYADYNDMMNLTEELIVEVVKRTCGTLKITYQGKEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PWRR M + +KE G+D E +++ + K L G +E K++ +
Sbjct: 307 FTPPWRRVRMRDFLKEKLGVDILEDSDEVLLKK---LEEHGVEVEIKNR---------AH 354
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L++++ +I VE +LV PTF++D+P++ISPLAK HR LTERFEL I GRE+ANAFSEL
Sbjct: 355 LIDKLRDI-VEEELVNPTFIIDHPVDISPLAKRHREDPRLTERFELIIFGREIANAFSEL 413
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ R EQ++ +E D+ ++ +D DFV ALEYGMP
Sbjct: 414 NDPIDQYQRFLEQMKMR------------------EEGDEEAH--MMDLDFVRALEYGMP 453
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+G+DRL M +T+S +IRD+I FP++K
Sbjct: 454 PTGGLGIGLDRLFMFITDSPTIRDIIPFPLVK 485
>gi|325849665|ref|ZP_08170868.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480006|gb|EGC83084.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 637
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/529 (45%), Positives = 339/529 (64%), Gaps = 49/529 (9%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHS-ANQLQEIYRHLANGEESNSEN 111
+ D + +R +K+E+L++ G P+A R + + ++++ + E
Sbjct: 2 ANKNQDLNEMLQIRREKLEKLKADGKNPHAIVNFRNRTLSKEIKDNFEEF--------EG 53
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V VAGR++ARR G ++F+ ++D G IQ+ ++ ++ D F + K + DIGD++G+
Sbjct: 54 KVVRVAGRIMARRGHGNMSFMDVQDSLGQIQV-VNRKNVMGDNFKETKGY-DIGDLIGIE 111
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +T +GE+S+ +LTKSL LP+K+HGL D D RYRQRYVD+I PEV DVF
Sbjct: 112 GKVFKTNQGEVSIETEHADLLTKSLQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKDVFV 171
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ +E+ GF+EVETP+L AGGA ARPF+T+HNSL +YLRIA+EL+LK
Sbjct: 172 LRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITHHNSLDIGMYLRIASELYLK 231
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GGF+K+YEIGR+FRNEG+ HNPEFTT+E+Y+AY D++ MM ITE +V + A V
Sbjct: 232 RLIVGGFDKVYEIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITETMVEYVANKV 291
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELG---NDLKVAKETTLRALGDG 408
G +++ G EI L+ PWRR +M + VKE +G+DFNE+ + +K+AKE
Sbjct: 292 KGSTVVEFDGNEIELKAPWRRVSMIDAVKEFSGVDFNEITEYEDAVKIAKEKN------- 344
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
IE S G ++ E F+ VE KL+QPTF++DYP+EISPLAK LT R
Sbjct: 345 --------IEVKDSRGEIIAEFFDEFVEEKLIQPTFIVDYPVEISPLAKRKNDDPSLTYR 396
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI G E+ANAFSEL D +DQ+ R +QV KR A DD +
Sbjct: 397 FEAFINGSEIANAFSELNDAVDQKERFLDQVA----KREAG--------------DDEAQ 438
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DFV ALE GMPP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 439 --MMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 485
>gi|385829129|ref|YP_005866901.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|423078382|ref|ZP_17067065.1| lysine--tRNA ligase [Lactobacillus rhamnosus ATCC 21052]
gi|259650774|dbj|BAI42936.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|357551239|gb|EHJ33033.1| lysine--tRNA ligase [Lactobacillus rhamnosus ATCC 21052]
Length = 499
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/519 (46%), Positives = 340/519 (65%), Gaps = 46/519 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K++ LR G++P+ +++DRTHSA +++E + GE+ E V++AGR++
Sbjct: 19 RREKMDALREAGIDPFGHRFDRTHSAAKVREEF-----GEDDKETLLEEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG++I L+ P+ R M + +K+ TG+DF E+ D R L D E E
Sbjct: 311 QGMDIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------EARKLADDHEVH----YE 359
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G E
Sbjct: 360 PYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEY 419
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAF+EL DP+DQR R E Q +EK++ E+ + +DDD+V
Sbjct: 420 ANAFTELNDPIDQRQRFEAQ-----------AAEKTAGNEEAQ---------GIDDDYVE 459
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|229551628|ref|ZP_04440353.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
gi|229315032|gb|EEN81005.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
Length = 499
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/521 (46%), Positives = 340/521 (65%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K++ LR G++P+ +++DRTHSA +++E + GE+ E V++AGR++
Sbjct: 19 RREKMDALREAGIDPFGHRFDRTHSAAKVREEF-----GEDDKETLLEEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFV 416
QG++I L+ P+ R M + +K+ TG+DF E T+ R L D E
Sbjct: 311 QGMDIDLDAPFARINMLDAIKDKTGVDF---------WPEMTVDEARKLADDHEVH---- 357
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 358 YEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKDTRFVERFELFVGGG 417
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EK++ E+ + +DDD+
Sbjct: 418 EYANAFTELNDPIDQRQRFEAQ-----------AAEKTAGNEEAQ---------GIDDDY 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 458 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|258509503|ref|YP_003172254.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|418071040|ref|ZP_12708314.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus R0011]
gi|257149430|emb|CAR88403.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|357538534|gb|EHJ22554.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus R0011]
Length = 498
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/519 (46%), Positives = 340/519 (65%), Gaps = 46/519 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K++ LR G++P+ +++DRTHSA +++E + GE+ E V++AGR++
Sbjct: 18 RREKMDALREAGIDPFGHRFDRTHSAAKVREEF-----GEDDKETLLEEKPEVTIAGRMM 72
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 73 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 131
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 132 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 191
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 192 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 251
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 252 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--Y 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG++I L+ P+ R M + +K+ TG+DF E+ D R L D E E
Sbjct: 310 QGMDIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------EARKLADDHEVH----YE 358
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G E
Sbjct: 359 PYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEY 418
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAF+EL DP+DQR R E Q +EK++ E+ + +DDD+V
Sbjct: 419 ANAFTELNDPIDQRQRFEAQ-----------AAEKTAGNEEAQ---------GIDDDYVE 458
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 497
>gi|400289882|ref|ZP_10791909.1| lysyl-tRNA synthetase [Streptococcus ratti FA-1 = DSM 20564]
gi|399920673|gb|EJN93490.1| lysyl-tRNA synthetase [Streptococcus ratti FA-1 = DSM 20564]
Length = 496
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/526 (44%), Positives = 342/526 (65%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S+ T + + +R +K+ L +G++P+ +++RT ++ QL+E Y + EE + N
Sbjct: 2 SNQHTEELNDQQIVRREKMAALSEQGIDPFGKRFERTATSGQLKEKYADKSK-EELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ERATIAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS + + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRDSFERFV 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ +++LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDNLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YEIGRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHVAKAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I+YQG EI + P++R + +L+KE TG+DF + TL+ +
Sbjct: 300 KGDGPIEYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WQPMTLKEAEALAKE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE +VE L+QPTFV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEELVEETLIQPTFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMCHEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D++ ALEYGMPP SG+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYIEALEYGMPPTSGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|341821012|emb|CCC57343.1| lysyl-tRNA synthetase [Weissella thailandensis fsh4-2]
Length = 493
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 341/515 (66%), Gaps = 39/515 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +K+ ELR G++P+ +++DRTH A++L +Y ++ GE+ ++ + V++AGR++ +R
Sbjct: 15 RREKMTELRDAGIDPFGHRFDRTHMASELHTLYDDVS-GEDLETQANEVAIAGRMMTKRR 73
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK++F ++D SG IQ++ +K + D ++ K D+GD LG G+M +T GELS+
Sbjct: 74 SGKISFADIKDRSGRIQVFVQKPVVGEDIYEWFKK-SDLGDWLGFKGTMMKTRAGELSLN 132
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V L+K+L PLPDK+HGLTDV+ +YRQRY+D+I+ + + F+KR+KI+S +R ++
Sbjct: 133 VTEITHLSKALRPLPDKFHGLTDVETKYRQRYLDLIANDDSFERFQKRSKIISAVRAYMD 192
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF EVETP+LQ AAGGA ARPF+T+HN+L DLY+RIA ELHLKR+++GG E++YEIG
Sbjct: 193 GDGFTEVETPMLQNAAGGAAARPFITHHNALNIDLYMRIALELHLKRLIVGGMERVYEIG 252
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ +HNPEFT +E Y A+ D +M TE I A AV+ LT+ YQG I
Sbjct: 253 RVFRNEGMDPKHNPEFTVMESYAAFWDLGDVMTETENIFKAAAKAVSEDLTVTYQGQTID 312
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFVIESSPS 422
L + + R+ M +L+KE TG+DF +E TL RA+ D E K+ E
Sbjct: 313 LSKTFARKHMVDLIKEQTGVDF---------WQEYTLEEARAIAD--EKGVKY--EQYWG 359
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE VE LV+PTFV +P+EISPLAK +RFELFI G E ANAF
Sbjct: 360 VGHIINEFFEEFVESTLVEPTFVYGHPVEISPLAKKADDDR-FAQRFELFIAGGEYANAF 418
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E Q +E+ + ++ + +D+DF+ +LEY
Sbjct: 419 TELNDPIDQRERFEAQ-----------AAERDAGNDEAE---------GIDEDFIESLEY 458
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL+MLLT++ +IRDV+ FP ++
Sbjct: 459 GMPPTGGLGIGIDRLIMLLTDAETIRDVLLFPTMR 493
>gi|227499307|ref|ZP_03929419.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
gi|227218658|gb|EEI83892.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
Length = 632
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 342/521 (65%), Gaps = 55/521 (10%)
Query: 65 LRIK--KVEELRSKGLEPYA---YKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
L+IK K+EEL+++GL+P+ +K R S N + + + +V +AGR
Sbjct: 11 LQIKREKLEELKAQGLDPHKVVNFKG-RIPSKNIKDDFEAY---------DGKNVRIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++A+R G ++F+ ++D+SG IQ+ ++ ++ D F Q+K + DIGDI+G+ G + +T +
Sbjct: 61 IMAKRGHGNMSFMDIQDESGQIQI-VNRKNVIGDLFSQVKKY-DIGDIVGIDGKVFKTNQ 118
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE+S+ + +++TKSL LP+K+HGL D D RYRQRY+D+I PEV DVF +R+ I+SE
Sbjct: 119 GEISIETETPLLMTKSLQMLPEKWHGLKDQDLRYRQRYLDLIVNPEVKDVFVQRSLIISE 178
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ GF+EVETP+L AGGA ARPF+T+HNSL +YLRIA+EL+LKR+++GGF+
Sbjct: 179 IRRFLDGKGFLEVETPILNTIAGGATARPFITHHNSLDIGMYLRIASELYLKRLIVGGFD 238
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIGR+FRNEG+ HNPEFTT+E+Y+AY+D++ MM ITE +V A V GK ++
Sbjct: 239 KVYEIGRMFRNEGMDATHNPEFTTMELYQAYADFEDMMEITETMVEAVAQKVKGKTLVEL 298
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGN---DLKVAKETTLRALGDGLENKDKFV 416
G EI L+ PW+R +M VKE +G+DFNE+ + +++AKE + G
Sbjct: 299 DGNEIELKAPWKRISMIEAVKEYSGVDFNEITDYEAAVEIAKEKNVEVKG---------- 348
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
S G ++ E F+ VE KL+QPTF++DYP+EISPLAK LT RFE FI G
Sbjct: 349 -----SRGEIIAEFFDEFVEDKLIQPTFIIDYPVEISPLAKRKNDDPSLTYRFEAFINGA 403
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E+ANAFSEL D LDQ+ R +QV KR A DD + +D DF
Sbjct: 404 EIANAFSELNDALDQKQRFLDQVA----KREAG--------------DDEAQ--MMDYDF 443
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALE GMPP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 444 VNALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 484
>gi|116493270|ref|YP_805005.1| lysyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
gi|421893887|ref|ZP_16324380.1| lysyl-tRNA synthetase [Pediococcus pentosaceus IE-3]
gi|122265266|sp|Q03E09.1|SYK_PEDPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|116103420|gb|ABJ68563.1| Lysyl-tRNA synthetase (class II) [Pediococcus pentosaceus ATCC
25745]
gi|385273372|emb|CCG89752.1| lysyl-tRNA synthetase [Pediococcus pentosaceus IE-3]
Length = 498
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/515 (45%), Positives = 335/515 (65%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR KG++P+ ++++RTH A QL E Y + EE + + ++AGR++++R
Sbjct: 15 VRREKMQELRDKGIDPFGHRFERTHLAAQLHEKYSDMTK-EELDEQGVVATIAGRMISKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK+ F L+D SG +QLY K+ L D + KVF DIGD LGV+G + +T+ GEL
Sbjct: 74 GKGKVGFADLKDRSGKMQLYVRKDVLGEDVY---KVFKRSDIGDFLGVTGDVMKTDMGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++ V L+K+L PLPDK+HGL +V++ YRQRY+D+I+ + D FRKR KIVS +R+
Sbjct: 131 TIKVTGLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLIANDDSMDRFRKRTKIVSAVRR 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ F EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++Y
Sbjct: 191 YLDGNDFAEVETPVLHTQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I AV+ I YQG
Sbjct: 251 EIGRVFRNEGIDTRHNPEFTMLETYAAYFDFHDVMDETEGIFKAAVAAVSDDGKITYQGT 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
E+ L + + R M + +K+ G+DF K++ E + L +++ ES +
Sbjct: 311 ELDLGQDFERLHMVDAIKKYAGVDFWP-----KMSVEDAKK-----LADENGIHYESWWT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++NE FE V+ +L QP F+ +P+EISPLAK + T+RFEL+I G E NAF
Sbjct: 361 VGHIINEFFEEKVQDQLKQPVFIYGHPVEISPLAKKNAEDDRFTDRFELYILGNEYGNAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQRAR E QV + R A E +D+D++ ALEY
Sbjct: 421 TELNDPIDQRARFEAQVAE----REAGNDEAEG----------------IDEDYIEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDV+ FP +K
Sbjct: 461 GMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMK 495
>gi|422826676|ref|ZP_16874855.1| lysine--tRNA ligase [Streptococcus sanguinis SK678]
gi|324994794|gb|EGC26707.1| lysine--tRNA ligase [Streptococcus sanguinis SK678]
Length = 496
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 337/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKY-NAKDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAA-------ALAQEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D DFV ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|258540705|ref|YP_003175204.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
gi|385836333|ref|YP_005874108.1| lysine--tRNA ligase [Lactobacillus rhamnosus ATCC 8530]
gi|257152381|emb|CAR91353.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
gi|355395825|gb|AER65255.1| lysine--tRNA ligase [Lactobacillus rhamnosus ATCC 8530]
Length = 498
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/521 (46%), Positives = 340/521 (65%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K++ LR G++P+ +++DRTHSA +++E + GE+ E V++AGR++
Sbjct: 18 RREKMDALREAGIDPFGHRFDRTHSAAKVREEF-----GEDDKETLLEEKPEVTIAGRMM 72
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 73 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 131
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 132 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 191
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 192 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 251
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 252 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--Y 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFV 416
QG++I L+ P+ R M + +K+ TG+DF E T+ R L D E
Sbjct: 310 QGMDIDLDAPFARINMLDAIKDKTGVDF---------WPEMTVDEARKLADDHEVH---- 356
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 357 YEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKDTRFVERFELFVGGG 416
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EK++ E+ + +DDD+
Sbjct: 417 EYANAFTELNDPIDQRQRFEAQ-----------AAEKTAGNEEAQ---------GIDDDY 456
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 457 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 497
>gi|225868226|ref|YP_002744174.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
gi|225701502|emb|CAW98673.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
Length = 497
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/514 (46%), Positives = 328/514 (63%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y E+ +AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFDRTTNSGELKEKYSD-KTKEDLQELQATAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + D +D K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDRQGQIQIYVRKDSVGDDNYDIFKK-ADLGDFIGVEGDIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS + F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRSSLERFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRIAPELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+YEAY+DY MM +TE I+ H A AV G+ IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
L P+RR M + +KE TGIDF E T L N+ +E SV
Sbjct: 313 KLHEPFRRVHMVDAIKEVTGIDF---------WPEMTFEE-ATALANEKHVPVEKHFTSV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+E+SPLAK + + T+RFELFI +E ANAF+
Sbjct: 363 GHIINAFFEAFVEDTLIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ +R + Q AA E DD + +D DFV ALEYG
Sbjct: 423 ELNDPIDQLSRFKAQ---------AAAKEL---------GDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|21909956|ref|NP_664224.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
gi|386362353|ref|YP_006071684.1| lysyl-tRNA synthetase [Streptococcus pyogenes Alab49]
gi|341958712|sp|P0DG46.1|SYK_STRP3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|341958713|sp|P0DG47.1|SYK_STRPQ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|21904145|gb|AAM79027.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
gi|350276762|gb|AEQ24130.1| lysyl-tRNA synthetase [Streptococcus pyogenes Alab49]
Length = 497
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/514 (46%), Positives = 331/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++ RT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 15 VRREKMMALAEQGIDPFGKRFGRTANSAELKENYAD-KTKEELHELNETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 313 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|450061924|ref|ZP_21844048.1| lysyl-tRNA synthetase [Streptococcus mutans NLML5]
gi|449206506|gb|EMC07208.1| lysyl-tRNA synthetase [Streptococcus mutans NLML5]
Length = 496
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 337/526 (64%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDSRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|422882611|ref|ZP_16929067.1| lysine--tRNA ligase [Streptococcus sanguinis SK355]
gi|332359479|gb|EGJ37299.1| lysine--tRNA ligase [Streptococcus sanguinis SK355]
Length = 496
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 337/516 (65%), Gaps = 37/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYND-KDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAISVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESS-PS 422
+ P++R M + +KE TG+DF ++ + VA L + K +E
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQDMSFEEAVA-----------LAKEKKVPLEKHFTE 361
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF
Sbjct: 362 VGHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAF 421
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALE 541
+EL DP+DQ +R E AQ K KE DD + +D DFV ALE
Sbjct: 422 TELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALE 460
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 461 YGMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|289422449|ref|ZP_06424292.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|289157021|gb|EFD05643.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
Length = 637
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/522 (44%), Positives = 336/522 (64%), Gaps = 50/522 (9%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
V +R K+++L+ G +P+ K++ +H ++++ Y L E VS+AGR+
Sbjct: 16 VLQVRRDKLKDLQEMGRDPFKISKYEVSHHSDEVIANYDSL--------EGQRVSLAGRI 67
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK +F+ L+D +G IQ Y +++ + D++ K + D+GDI+G+ G + +T+
Sbjct: 68 MSKRVMGKASFMHLQDQNGRIQAYVKRDDIGVDEYKLFKTY-DLGDIVGIEGFVFKTKTE 126
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+SV V V+L+KSL LP+KYHGL DVD RYRQRYVD+I PEV + F R K + +
Sbjct: 127 EVSVHVEKLVLLSKSLQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKEAFLTRTKALKAL 186
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R ++ GF+EVETP+L AGGA ARPF+T+HN+L +YLRIA EL+LKR+++GGF+K
Sbjct: 187 RSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPMYLRIANELYLKRLIVGGFDK 246
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY+ MM ITE +++H A G + IDYQ
Sbjct: 247 VYEMGRMFRNEGMDMKHNPEYTAIELYQAYADYKDMMEITENVISHMAEVATGSMKIDYQ 306
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVI 417
G EI PW+R TM VKE G+DF+E+ D L +A+E I
Sbjct: 307 GTEIDFTPPWKRMTMEECVKEYAGVDFSEINTDEEALAIAREKG---------------I 351
Query: 418 ESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E +P + G ++N FE E +L+QPTF+ +P+E+SPLAK + T+RFE F
Sbjct: 352 EITPGMRRGEVINAFFEEFGEDQLIQPTFITHHPVEVSPLAKRNVEDPRRTDRFEAFANR 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
E+ANAFSEL DP+DQR R E+QVR K + DD + E +D+D
Sbjct: 412 WELANAFSELNDPIDQRGRFEDQVR------------------KRELGDDEACE--MDED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE G+PP G+G+GIDR++MLLTNS +IRDV+ FP +K
Sbjct: 452 FLNALEVGLPPTGGLGIGIDRVIMLLTNSTTIRDVLLFPTMK 493
>gi|328955978|ref|YP_004373311.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
gi|328456302|gb|AEB07496.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
Length = 508
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/518 (47%), Positives = 329/518 (63%), Gaps = 40/518 (7%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
RA R+ K L + G +PY K H +L+ Y LA+GE S D VSVAGRV+A
Sbjct: 25 RAHRLAKRAALIADGGDPYPEKTVAKHHVAELELAYASLADGE---STTDIVSVAGRVMA 81
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFV---DIGDILGVSGSMKRTEK 179
+R GK+AF+ +RD +G IQL+C ++D D+ V D+GDI+ VSG + RT +
Sbjct: 82 KRGQGKIAFIVVRDPTGEIQLFCR----INDMRDEDWALVRDLDLGDIVNVSGCVVRTRR 137
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
G+LS+ S +L KS+ PLP+K+HGL+D + RYRQRYVD+I EV F KR++I+S
Sbjct: 138 GQLSIAPTSVALLAKSVRPLPEKFHGLSDKETRYRQRYVDLIMNDEVRSTFEKRSRILSA 197
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
R+ +++ G+ EVETP+LQ GGA A+PF+T+HN+L ++ YLRIATELHLKR+L+GGFE
Sbjct: 198 FRRHMDADGYFEVETPILQNIQGGATAKPFITHHNALNQENYLRIATELHLKRLLVGGFE 257
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YEIGRIFRNEG+ HNPEFTT+E Y AYSD + M + + ++ AVN IDY
Sbjct: 258 RVYEIGRIFRNEGMDQTHNPEFTTMEAYRAYSDLEGMKALAQGVIKAANAAVNSSERIDY 317
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG I L W M +V EA G + + D +V +E A G+E +E+
Sbjct: 318 QGRAIDLSGTWVSRPMAEIVSEALG---SPVSLDTRV-EELRAHAAAHGIE------VEA 367
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G L+ E+++ + EP ++ PTFV DYP+E+SPLAK R LT RFEL I G E A
Sbjct: 368 EWTAGRLIAELYDEIGEPTIIDPTFVCDYPVEVSPLAKRRRDDPRLTHRFELVIAGHEYA 427
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP+DQ R Q V EK+S DD + E D DF+ A
Sbjct: 428 NAFSELNDPVDQAERFRRQ-----------VEEKASG-------DDEAME--YDADFIRA 467
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPPA G+G+G+DR+VMLLTNSASIRDV+ FP ++
Sbjct: 468 LEYGMPPAGGIGIGVDRVVMLLTNSASIRDVLLFPHMR 505
>gi|148270135|ref|YP_001244595.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
gi|281412523|ref|YP_003346602.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
gi|166230599|sp|A5ILE6.1|SYK_THEP1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|147735679|gb|ABQ47019.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
gi|281373626|gb|ADA67188.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
Length = 502
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/515 (46%), Positives = 337/515 (65%), Gaps = 35/515 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S AGRV++ R
Sbjct: 9 RLNEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRH 66
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK AF ++DD+G IQ Y + + ++ D K V IGD +GV G +++ GEL++
Sbjct: 67 HGKTAFFHMKDDTGRIQAYVRADSVGKEKMDLFKRHVKIGDFIGVRGFPFKSKTGELTIY 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L+K+L PLP+K+HG+ D + YRQRY+++I E + FRKR K V IR+ +
Sbjct: 127 VQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLN 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GF+EVETP+L GGAEARPFVT+ N D+YLRIA EL+LKR++IGGFEKIYEIG
Sbjct: 187 SRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMYLRIAPELYLKRLIIGGFEKIYEIG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
+ FRNEG+S +H+PEFT+IE+Y+AY+DY MM++TEE++ G L I YQG EI
Sbjct: 247 KNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PW+R M + +KE G+D E +++ + K L G LE K++ +
Sbjct: 307 FTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK---LEEYGVELEIKNR---------AH 354
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L++++ ++ VE +LV PTF++D+P+ ISPLAK HR LTERFEL I GRE+ANAFSEL
Sbjct: 355 LIDKLRDL-VEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSEL 413
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ R EQ + +E D+ ++ +D DFV ALEYGMP
Sbjct: 414 NDPVDQYQRFLEQAKMR------------------EEGDEEAH--MMDLDFVRALEYGMP 453
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
P G+G+G+DRL M +T+S +IRDVI FPI+K Q+
Sbjct: 454 PTGGLGIGLDRLFMFITDSPTIRDVIPFPIVKPQK 488
>gi|450000571|ref|ZP_21825229.1| lysyl-tRNA synthetase [Streptococcus mutans N29]
gi|449185668|gb|EMB87545.1| lysyl-tRNA synthetase [Streptococcus mutans N29]
Length = 496
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALAEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|429728508|ref|ZP_19263228.1| lysine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|429149303|gb|EKX92283.1| lysine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 637
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/522 (44%), Positives = 336/522 (64%), Gaps = 50/522 (9%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
V +R K+++L+ G +P+ K++ +H ++++ Y L E VS+AGR+
Sbjct: 16 VLQVRRDKLKDLQEMGRDPFKISKYEVSHHSDEVIANYDSL--------EGQRVSLAGRI 67
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK +F+ L+D +G IQ Y +++ + D++ K + D+GDI+G+ G + +T+
Sbjct: 68 MSKRVMGKASFMHLQDQNGRIQAYVKRDDIGVDEYKLFKTY-DLGDIVGIEGFVFKTKTE 126
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+SV V V+L+KSL LP+KYHGL DVD RYRQRYVD+I PEV + F R K + +
Sbjct: 127 EVSVHVEKLVLLSKSLQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKEAFLTRTKALKAL 186
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R ++ GF+EVETP+L AGGA ARPF+T+HN+L +YLRIA EL+LKR+++GGF+K
Sbjct: 187 RSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPMYLRIANELYLKRLIVGGFDK 246
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY+ MM ITE +++H A G + IDYQ
Sbjct: 247 VYEMGRMFRNEGMDMKHNPEYTAIELYQAYADYKDMMEITENVISHMAEVATGSMKIDYQ 306
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVI 417
G EI PW+R TM VKE G+DF+E+ D L +A+E I
Sbjct: 307 GTEIDFTPPWKRMTMEECVKEYAGVDFSEINTDEEALAIAREKG---------------I 351
Query: 418 ESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E +P + G ++N FE E +L+QPTF+ +P+E+SPLAK + T+RFE F
Sbjct: 352 EITPGMRRGEVINAFFEEFGEDQLIQPTFITHHPVEVSPLAKRNVEDPRRTDRFEAFANR 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
E+ANAFSEL DP+DQR R E+QVR K + DD + E +D+D
Sbjct: 412 WELANAFSELNDPIDQRGRFEDQVR------------------KRELGDDEACE--MDED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE G+PP G+G+GIDR++MLLTNS +IRDV+ FP +K
Sbjct: 452 FLNALEVGLPPTGGLGIGIDRVIMLLTNSTTIRDVLLFPTMK 493
>gi|125718339|ref|YP_001035472.1| lysyl-tRNA synthetase [Streptococcus sanguinis SK36]
gi|323351244|ref|ZP_08086900.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
gi|422820907|ref|ZP_16869100.1| lysine--tRNA ligase [Streptococcus sanguinis SK353]
gi|422823237|ref|ZP_16871425.1| lysine--tRNA ligase [Streptococcus sanguinis SK405]
gi|422848304|ref|ZP_16894980.1| lysine--tRNA ligase [Streptococcus sanguinis SK115]
gi|422854601|ref|ZP_16901265.1| lysine--tRNA ligase [Streptococcus sanguinis SK160]
gi|422855172|ref|ZP_16901830.1| lysine--tRNA ligase [Streptococcus sanguinis SK1]
gi|422862165|ref|ZP_16908797.1| lysine--tRNA ligase [Streptococcus sanguinis SK408]
gi|422865133|ref|ZP_16911758.1| lysine--tRNA ligase [Streptococcus sanguinis SK1058]
gi|422870571|ref|ZP_16917064.1| lysine--tRNA ligase [Streptococcus sanguinis SK1087]
gi|166230594|sp|A3CP17.1|SYK_STRSV RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|125498256|gb|ABN44922.1| Lysyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
gi|322122468|gb|EFX94179.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
gi|324991525|gb|EGC23458.1| lysine--tRNA ligase [Streptococcus sanguinis SK353]
gi|324993887|gb|EGC25806.1| lysine--tRNA ligase [Streptococcus sanguinis SK405]
gi|325690836|gb|EGD32837.1| lysine--tRNA ligase [Streptococcus sanguinis SK115]
gi|325696096|gb|EGD37987.1| lysine--tRNA ligase [Streptococcus sanguinis SK160]
gi|327463149|gb|EGF09470.1| lysine--tRNA ligase [Streptococcus sanguinis SK1]
gi|327474760|gb|EGF20165.1| lysine--tRNA ligase [Streptococcus sanguinis SK408]
gi|327489865|gb|EGF21654.1| lysine--tRNA ligase [Streptococcus sanguinis SK1058]
gi|328946786|gb|EGG40924.1| lysine--tRNA ligase [Streptococcus sanguinis SK1087]
Length = 496
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 336/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYND-KDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAA-------ALAQEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D DFV ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|257440518|ref|ZP_05616273.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
gi|257197022|gb|EEU95306.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
Length = 503
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/536 (44%), Positives = 337/536 (62%), Gaps = 44/536 (8%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANG 104
+R + S S++ VR +K+ +L++ G +P+ K+ + + L+E ++ L N
Sbjct: 4 QKRNPAQGLSESEQVQVRR---QKLADLQAAGNDPFTLTKFPQDAYSADLKEEFKDLPNE 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
+S + V++AGR++++R GK +F LRDD G IQLY ++ L + + K +D+
Sbjct: 61 TDSGKQ---VALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGEEAYAAFKK-LDV 116
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+GV G + RT+ GELSV +L KSL PLP+K+HGLTD + RYRQRYVD+I+ P
Sbjct: 117 GDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIANP 176
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV D F KR++I+ EIR ++ GF+EV+TP+L GA ARPF T+HNSL D+ LRI
Sbjct: 177 EVKDTFVKRSQILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNSLNMDMVLRI 236
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
TEL+LKR+++GG +++YE+GRIFRNEG+ +HNPEFT+IE+Y+A++D+ MM++ EE+
Sbjct: 237 ETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNPEFTSIELYQAFTDFHGMMDLVEELY 296
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
AL + G + I YQG +I + W R TM VK+ +G+DFN+ +D + AKE
Sbjct: 297 KRLALKICGSMVIPYQGKQIDMSH-WERLTMVEAVKKYSGVDFNDWKSDEDAIASAKEHH 355
Query: 402 LRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
+ + P+ G +L E F+ VE KL+QPTF+ DYP+EISPLAK
Sbjct: 356 VE-------------LPEVPTKGAILAEFFDAFVEDKLIQPTFIYDYPVEISPLAKRKPD 402
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
TERFE FI E NAFSEL DP+DQ+ R E QV + A+ AQ
Sbjct: 403 DPAFTERFEYFIDCTEYGNAFSELNDPIDQKGRFERQVAERK-----AIEPDCKAQ---- 453
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYG+PP G+G G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 454 ----------VDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFPTMK 499
>gi|449888239|ref|ZP_21787201.1| lysyl-tRNA synthetase [Streptococcus mutans SA41]
gi|449251483|gb|EMC49494.1| lysyl-tRNA synthetase [Streptococcus mutans SA41]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TGIDF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGIDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|422859797|ref|ZP_16906441.1| lysine--tRNA ligase [Streptococcus sanguinis SK330]
gi|422876049|ref|ZP_16922519.1| lysine--tRNA ligase [Streptococcus sanguinis SK1056]
gi|422878433|ref|ZP_16924899.1| lysine--tRNA ligase [Streptococcus sanguinis SK1059]
gi|422884486|ref|ZP_16930934.1| lysine--tRNA ligase [Streptococcus sanguinis SK49]
gi|422928286|ref|ZP_16961228.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 29667]
gi|422931282|ref|ZP_16964213.1| lysine--tRNA ligase [Streptococcus sanguinis SK340]
gi|327470680|gb|EGF16136.1| lysine--tRNA ligase [Streptococcus sanguinis SK330]
gi|332358916|gb|EGJ36737.1| lysine--tRNA ligase [Streptococcus sanguinis SK49]
gi|332362485|gb|EGJ40285.1| lysine--tRNA ligase [Streptococcus sanguinis SK1056]
gi|332367177|gb|EGJ44913.1| lysine--tRNA ligase [Streptococcus sanguinis SK1059]
gi|339617431|gb|EGQ22057.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 29667]
gi|339620464|gb|EGQ25034.1| lysine--tRNA ligase [Streptococcus sanguinis SK340]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 336/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYND-KDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAA-------ALAKEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D DFV ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|450034950|ref|ZP_21834738.1| lysyl-tRNA synthetase [Streptococcus mutans M21]
gi|450071578|ref|ZP_21848196.1| lysyl-tRNA synthetase [Streptococcus mutans M2A]
gi|449196066|gb|EMB97364.1| lysyl-tRNA synthetase [Streptococcus mutans M21]
gi|449212238|gb|EMC12612.1| lysyl-tRNA synthetase [Streptococcus mutans M2A]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|28896347|ref|NP_802697.1| lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
gi|28811598|dbj|BAC64530.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
Length = 501
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/514 (46%), Positives = 331/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++ RT ++ +L+E Y EE + N+ VAGR++ +R
Sbjct: 19 VRREKMMALAEQGIDPFGKRFGRTANSAELKENYAD-KTKEELHELNETAIVAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF E T+ + K + + SVG
Sbjct: 317 RINEPFKRVHMVDAIKEVTGVDF---------WPEMTVEEAIALAKEKQVPLEKHFTSVG 367
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 368 HIINAFFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTE 427
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 428 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|363894152|ref|ZP_09321242.1| hypothetical protein HMPREF9629_01568 [Eubacteriaceae bacterium
ACC19a]
gi|361962895|gb|EHL15993.1| hypothetical protein HMPREF9629_01568 [Eubacteriaceae bacterium
ACC19a]
Length = 642
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/519 (44%), Positives = 343/519 (66%), Gaps = 44/519 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
+ L+ +K+ +L+ G +P+ K+D+TH + ++++ + +G+E VSVAGR+
Sbjct: 11 IERLKYEKLLKLQENGKDPFKIEKFDQTHHSKEIKDNFEDF-DGKE-------VSVAGRM 62
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
++ R+FGK F+ ++D G IQ Y K++L D + + K F DIGDI+GV+G + +T+K
Sbjct: 63 MSFRSFGKATFIDIQDKDGRIQSYVRKDQLGEDLYKEFKEF-DIGDIVGVTGIVFKTQKD 121
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+S+ +S +L+KSL LP+KYHGL D+D RYRQRYVD+I PEV + F R K + +
Sbjct: 122 EISIKASSIQLLSKSLRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKAL 181
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R +E F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGFEK
Sbjct: 182 RDFLEQREFIEVETPILNTIAGGAAARPFITHHNTLDIDMYLRIANELYLKRLIVGGFEK 241
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T +E+Y+AY+DY+ +M +TEE V + A A G I+YQ
Sbjct: 242 VYEMGRMFRNEGMDMKHNPEYTAMELYQAYADYEDIMKLTEEAVAYMAEAATGSTLIEYQ 301
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G +I L+ PWRR +M + +K+ IDF+ T++ + +E + +E
Sbjct: 302 GKQIDLKPPWRRLSMTDAIKQYANIDFD------------TIKTDEEAVELAKEHAVEII 349
Query: 421 PSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
P + G++++ +FE E KL++PTF+ +P+EISPL+K + +T RFE F+ E+
Sbjct: 350 PEMTRGHVISAIFEKYCEEKLIEPTFITHHPVEISPLSKRNPDDPRITNRFEAFVNTWEI 409
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQRAR Q+RQ +E D ++ LD+DF+
Sbjct: 410 ANAFSELNDPIDQRARFMAQLRQ-------------------RELGDEEAQM-LDEDFLN 449
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
A+E GMPP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 450 AIEVGMPPTGGLGIGIDRVIMLLTNSASIRDVILFPTMK 488
>gi|365903681|ref|ZP_09441504.1| lysyl-tRNA synthetase [Lactobacillus malefermentans KCTC 3548]
Length = 500
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 335/516 (64%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ELR +G++P+ ++++RT+ A +L E + + EE N +AGR+V++R
Sbjct: 15 VRREKMNELREEGIDPFGHRFERTYLAKELHEQFAD-EDKEELNELEKKAIIAGRMVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D SG +Q+Y K+ +L ++ + DIGD LG+ G + +T+ GEL++
Sbjct: 74 GKGKVGFADIQDRSGKVQIYVRKD-ILGEEIYHIFKRADIGDHLGIEGDIIKTDMGELTI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLPDK+HGL + ++ YRQRY+D+IS PE + F+ R+KI+S IR +
Sbjct: 133 RATKLTFLSKALRPLPDKFHGLQNKEQIYRQRYLDLISNPESFERFQNRSKIISAIRAYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F EVETPVL AGGA ARPF+T+HN+L DLYLRIA EL+LKR+++GG E++YEI
Sbjct: 193 DGLDFTEVETPVLHTQAGGANARPFMTHHNALDIDLYLRIALELYLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ RHNPEFT +E Y AY D+ +M+ TE I A AV K ++DYQG E+
Sbjct: 253 GRVFRNEGMDKRHNPEFTMLESYVAYFDFNDVMDETEGIFKAAAKAVTDKGSVDYQGTEV 312
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGND--LKVAKETTLRALGDGLENKDKFVIESSP 421
L + ++RE M + +KE TG+DF E+ D K+A E +R E
Sbjct: 313 DLNKDFKREHMVDAIKEYTGVDFWKEMSVDEARKLADEHGVR-------------YEKYW 359
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++N FE +V+ KL QPTF+ +P+EISPLAK + + T+RFEL+I G E ANA
Sbjct: 360 VVGHIINAFFEELVQDKLDQPTFIYGHPVEISPLAKKNPKDPRFTDRFELYILGNEYANA 419
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E QV++ R A E +D+DF+ ALE
Sbjct: 420 FTELNDPIDQRERFEAQVKE----REAGNDEAEG----------------IDEDFIEALE 459
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLTN+ +IRDV+ FP +K
Sbjct: 460 YGMPPTGGLGIGIDRLVMLLTNAETIRDVLLFPTMK 495
>gi|315640561|ref|ZP_07895669.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
gi|315483765|gb|EFU74253.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
Length = 497
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 332/516 (64%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++++RTH + +L E++ EE SVAGR+V +R
Sbjct: 17 VRRQKMESLREEGIDPFGHRFERTHQSAELHELFDPRTK-EELEEMGLTASVAGRIVTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+++ + +D K D+GD GV+G + +T+ GE+++
Sbjct: 76 GKGKVGFAHLQDREGRIQIYVRKDQVGDEPYDVFK-HADLGDFFGVTGQIMKTDTGEVTI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
IL+K+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR+KI+SEIR+ +
Sbjct: 135 KPTEITILSKALRPLPDKYHGLTNVEQRYRQRYLDLISNQESFDRFTKRSKIISEIRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LG++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 195 DGLGYLEVETPVLHNQAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DY+ +M++TE I+ A +I Y G +
Sbjct: 255 GRVFRNEGIDTTHNPEFTMMECYTAYTDYRDVMDLTEAIIRTVAEKTLDTTSITYGGAPV 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
L +RR M + VKE TG+DF + + + AKE + I +
Sbjct: 315 DLGSDFRRVHMADAVKEKTGVDFWQEMSIEQARQYAKEHNVE-------------ITDAM 361
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+VG++LNE FE VE L QPTFV +P+E+SPLAK + T+RFELFI GRE ANA
Sbjct: 362 AVGHILNEFFETFVEETLQQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANA 421
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+D + + + +D ++ V D+DF+ ALE
Sbjct: 422 FTELNDPID------------------QRERFEEQEREREAGNDEAHGV--DEDFLEALE 461
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 462 YGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 497
>gi|401681373|ref|ZP_10813273.1| lysine--tRNA ligase [Streptococcus sp. AS14]
gi|400186143|gb|EJO20356.1| lysine--tRNA ligase [Streptococcus sp. AS14]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/515 (45%), Positives = 337/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT +++QL+E Y + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSDQLKEKYND-KDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAA-------ALAQEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D DFV ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|195978451|ref|YP_002123695.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975156|gb|ACG62682.1| Lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 501
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/514 (45%), Positives = 330/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y E+ +AGR++ +R
Sbjct: 19 VRREKMAALAEQGIDPFGKRFDRTTNSGELKEKYSD-KTKEDLQELQATAIIAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDRQGQIQIYVRKDSVGDENYDIFKK-ADLGDFIGVEGDIMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS + F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRSSFERFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+YEAY+DY MMN+TE I+ H A AV G+ +DYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYEAYADYLDMMNLTEGIIQHAAKAVRGEGPVDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TGIDF E T L N+ +E SV
Sbjct: 317 KINEPFKRIHMVDAIKEVTGIDF---------WPEMTFEE-ATALANEKHVPLEKHFTSV 366
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+E+SPLAK + + T+RFELFI +E ANAF+
Sbjct: 367 GHIINAFFEAFVEDTLIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFT 426
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ +R + Q AA E DD + +D DFV ALEYG
Sbjct: 427 ELNDPIDQLSRFKAQ---------AAAKEL---------GDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|422851293|ref|ZP_16897963.1| lysine--tRNA ligase [Streptococcus sanguinis SK150]
gi|325694881|gb|EGD36786.1| lysine--tRNA ligase [Streptococcus sanguinis SK150]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 337/516 (65%), Gaps = 37/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE N N+ +AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYND-KDKEELNELNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++VNG ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESS-PS 422
+ P++R M + +KE TG+DF ++ + VA L + K +E
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQDMSFEEAVA-----------LAQEKKVPLEKHFTE 361
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF
Sbjct: 362 VGHVINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAF 421
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALE 541
+EL DP+DQ +R E AQ K KE DD + +D DFV ALE
Sbjct: 422 TELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDFVEALE 460
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 461 YGMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|284048762|ref|YP_003399101.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952983|gb|ADB47786.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 664
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 328/513 (63%), Gaps = 37/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R+ K+ +L KG+ P+ + + TH ++ + E + V VAGR++A R
Sbjct: 27 VRLDKMHKLEEKGIRPFGHAYQWTHHTKEVHD------QVEAMEAAGTVVKVAGRLLAIR 80
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F+ L+D +G IQLY K+ + D + +K+ +DIGDI+GV G + +T GE S+
Sbjct: 81 GHGKTCFMDLQDKTGKIQLYVRKDEMGEDAYSVVKL-LDIGDIVGVEGPVFKTHMGEPSI 139
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V L+K+L PLP+K+HGL D + RYRQRYVD+I PEV DVF KR +I+ IR+ +
Sbjct: 140 RVQKLEFLSKALKPLPEKWHGLKDKEIRYRQRYVDLIVNPEVRDVFVKRTQIIKCIRQVL 199
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETPVL +GGA ARPF+T+HN+L DLYLRIATEL+LKR+++GG E++YE+
Sbjct: 200 DDQGYLEVETPVLNTISGGATARPFITHHNALDIDLYLRIATELNLKRLVVGGLERVYEL 259
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ +HNPEFTT+E YEA+ D+ +MM++TE+IVT CA V G L I Y+G EI
Sbjct: 260 GRVFRNEGMDIKHNPEFTTLECYEAFGDFNTMMDLTEKIVTTCAEKVLGTLKIQYEGTEI 319
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM + VK+ +G DF + D++ A++ L + +E + VG
Sbjct: 320 DLTGPWPRMTMIDAVKKYSGKDFTGV-KDVETARQ---------LAREAGVAVEPAWGVG 369
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++N F+ VE L+QP F+ +P EISPLAK +T+RFE +I GRE+ N F+E
Sbjct: 370 KIINAFFDEFVEKNLIQPIFITGHPKEISPLAKSSAADPEITDRFEGYIFGRELCNGFTE 429
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQ+ R E+QV + N DD + +D+DF+ AL +G+
Sbjct: 430 LNDPLDQKERFEKQVEERN------------------AGDDEAG--MMDEDFINALMHGL 469
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVM LT + SIRDV+ FP +K
Sbjct: 470 PPTGGLGIGIDRLVMFLTGAVSIRDVLLFPTMK 502
>gi|417848478|ref|ZP_12494423.1| lysine--tRNA ligase [Streptococcus mitis SK1073]
gi|339452692|gb|EGP65315.1| lysine--tRNA ligase [Streptococcus mitis SK1073]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + +D K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYDIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|450077275|ref|ZP_21850346.1| lysyl-tRNA synthetase [Streptococcus mutans N3209]
gi|449211465|gb|EMC11869.1| lysyl-tRNA synthetase [Streptococcus mutans N3209]
Length = 496
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTTTSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|218296573|ref|ZP_03497301.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
gi|218243115|gb|EED09647.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
Length = 492
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/512 (47%), Positives = 332/512 (64%), Gaps = 38/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +E L G EPY Y++ + HSA + E A + V++AGRVVA R
Sbjct: 8 RLLNLEALVEAGFEPYPYRFPKAHSARAILEAK---AGAPPETEWPEEVALAGRVVAIRR 64
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L D+SG IQLY +K+ L+ +++ LK +D+GDILGV G + T+ GE++V
Sbjct: 65 MGKVTFAHLLDESGRIQLYFQKD--LTPRYELLKK-LDVGDILGVKGPLFTTKTGEVTVK 121
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V S+ L KSL PLPDK+HGL D + RYRQRY+D+I PEV +VFR+R+++V IR+ E
Sbjct: 122 VLSWTPLVKSLHPLPDKWHGLKDKEVRYRQRYLDLIVNPEVREVFRRRSEMVRYIRRFFE 181
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP+LQ GGAEARPF TYHN+L + +LRI+ EL+LKR+L+GG+EK++EIG
Sbjct: 182 DRGFLEVETPILQATTGGAEARPFKTYHNALDHEFFLRISLELYLKRLLVGGYEKVFEIG 241
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ HNPEFT +E Y AY+DYQ M + EE+++ L + G + YQG +
Sbjct: 242 RVFRNEGIDHNHNPEFTMLEAYWAYADYQDMALLVEELLSGLVLHLFGTYEVPYQGRILN 301
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+ P+RR + +KE G+ F+ L DL+ LR D + + PS
Sbjct: 302 FKPPFRRISFVEALKEKAGLPFDPL--DLE-----RLRLWADAHHPE----LAQVPSY-K 349
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LL+++F + VEP+L PTFV D+P+ ISPLAK HR GLTER++LF G E+A A+SEL
Sbjct: 350 LLDKLFGLYVEPELQDPTFVFDFPLAISPLAKRHREKPGLTERWDLFAGGMELAPAYSEL 409
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DPLDQR R EQ R+ KE D+ + E D+DF+ ALEYGMP
Sbjct: 410 NDPLDQRERFLEQARRR------------------KEGDEEAPEP--DEDFLLALEYGMP 449
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA+G+GLGIDRL MLLT+ AS+RDV+ FP++K
Sbjct: 450 PAAGLGLGIDRLAMLLTDQASLRDVLLFPLMK 481
>gi|126180281|ref|YP_001048246.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
gi|229559860|sp|A3CY14.1|SYK_METMJ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|125863075|gb|ABN58264.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
Length = 508
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/523 (46%), Positives = 324/523 (61%), Gaps = 34/523 (6%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S D +I K++ELR +G+ Y Y +DR + +++E + + E + + V
Sbjct: 2 SDMDHTCFDTAKIDKLQELRERGVTVYPYTFDRRDTVEEIKERFSAI----EHDKSEEEV 57
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
S AGRV R GK F + D G IQLY K L +QFD K +VD GDI+GV G +
Sbjct: 58 STAGRVYVVRQHGKTIFADIGDSEGRIQLYLRKNDLGEEQFDLFKQYVDAGDIVGVVGHV 117
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
RT+ GE++V V+ F +LTKS+ PLP+K+HGL +V+ RYRQRY+D+I E + FR R+
Sbjct: 118 FRTKMGEITVWVDRFELLTKSVCPLPEKFHGLKNVETRYRQRYLDLIMNEESRETFRARS 177
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
+I+S +R+ + ++E ETP LQ GGA ARPF T+HN+L + LYLRIA EL+LKR++
Sbjct: 178 RIISLLRQFLFERDYLEFETPTLQPIYGGANARPFTTHHNALDQKLYLRIAPELYLKRLV 237
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGF+K++EI + FRNE + T HNPEFT +E+YEAY DY MMN+TEEI++H A V G
Sbjct: 238 VGGFDKVFEIAKNFRNEDIDTNHNPEFTMVEVYEAYRDYNDMMNLTEEILSHLAEKVLGT 297
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
+ G ++ RPWRR TM V+E GIDF + + L A GLE+ +
Sbjct: 298 TVCSFAGHDLDFSRPWRRLTMEEAVREYAGIDFPAMSLE-------ELHAF--GLEHCVE 348
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
ES+ + G L FE E L+QPTF+ D+PIE SPLAK HR GLTERFELFI
Sbjct: 349 -GCESAATRGEYLVLFFEHFGEKHLIQPTFIYDFPIENSPLAKKHRSKEGLTERFELFIA 407
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
G EMAN FSEL DPLDQ+ARLE+Q + KR E +D
Sbjct: 408 GMEMANGFSELNDPLDQKARLEQQ----DAKRRKGDLEAQ----------------MIDY 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ AL YGMPP G+G+GIDRLVMLLT SI++V+ FP +K
Sbjct: 448 DFINALGYGMPPTGGVGIGIDRLVMLLTGKDSIKEVLLFPQMK 490
>gi|290580761|ref|YP_003485153.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
gi|449876769|ref|ZP_21782952.1| lysyl-tRNA synthetase [Streptococcus mutans S1B]
gi|449943963|ref|ZP_21806549.1| lysyl-tRNA synthetase [Streptococcus mutans 11A1]
gi|449969548|ref|ZP_21813288.1| lysyl-tRNA synthetase [Streptococcus mutans 2VS1]
gi|450012340|ref|ZP_21829585.1| lysyl-tRNA synthetase [Streptococcus mutans A19]
gi|450022766|ref|ZP_21830136.1| lysyl-tRNA synthetase [Streptococcus mutans U138]
gi|450030488|ref|ZP_21833240.1| lysyl-tRNA synthetase [Streptococcus mutans G123]
gi|450040063|ref|ZP_21836573.1| lysyl-tRNA synthetase [Streptococcus mutans T4]
gi|450059173|ref|ZP_21843379.1| lysyl-tRNA synthetase [Streptococcus mutans NLML4]
gi|450066811|ref|ZP_21846212.1| lysyl-tRNA synthetase [Streptococcus mutans NLML9]
gi|450093208|ref|ZP_21856491.1| lysyl-tRNA synthetase [Streptococcus mutans W6]
gi|450147732|ref|ZP_21875230.1| lysyl-tRNA synthetase [Streptococcus mutans 14D]
gi|450160736|ref|ZP_21880164.1| lysyl-tRNA synthetase [Streptococcus mutans 66-2A]
gi|450164448|ref|ZP_21881369.1| lysyl-tRNA synthetase [Streptococcus mutans B]
gi|254997660|dbj|BAH88261.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
gi|449148933|gb|EMB52760.1| lysyl-tRNA synthetase [Streptococcus mutans 11A1]
gi|449174067|gb|EMB76583.1| lysyl-tRNA synthetase [Streptococcus mutans 2VS1]
gi|449188487|gb|EMB90195.1| lysyl-tRNA synthetase [Streptococcus mutans A19]
gi|449192769|gb|EMB94176.1| lysyl-tRNA synthetase [Streptococcus mutans G123]
gi|449194488|gb|EMB95843.1| lysyl-tRNA synthetase [Streptococcus mutans U138]
gi|449199517|gb|EMC00578.1| lysyl-tRNA synthetase [Streptococcus mutans T4]
gi|449203240|gb|EMC04112.1| lysyl-tRNA synthetase [Streptococcus mutans NLML4]
gi|449208610|gb|EMC09194.1| lysyl-tRNA synthetase [Streptococcus mutans NLML9]
gi|449217427|gb|EMC17482.1| lysyl-tRNA synthetase [Streptococcus mutans W6]
gi|449236592|gb|EMC35502.1| lysyl-tRNA synthetase [Streptococcus mutans 14D]
gi|449239680|gb|EMC38391.1| lysyl-tRNA synthetase [Streptococcus mutans 66-2A]
gi|449241923|gb|EMC40533.1| lysyl-tRNA synthetase [Streptococcus mutans B]
gi|449251873|gb|EMC49872.1| lysyl-tRNA synthetase [Streptococcus mutans S1B]
Length = 496
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|257066135|ref|YP_003152391.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
gi|256798015|gb|ACV28670.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
Length = 631
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 339/518 (65%), Gaps = 49/518 (9%)
Query: 65 LRIK--KVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
L+IK K+E+L+ +G +P+ + A+ L + +GE+ V +AGR++A
Sbjct: 11 LQIKRDKLEDLKKEGRDPHKVVNFKGRIASSLIKDNFEKYDGEK-------VRIAGRIMA 63
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R G ++F+ ++D+ G IQ+ ++ ++ D+F Q+K + DIGDI+G+ G + +T +GE+
Sbjct: 64 KRGHGNMSFMDIQDEEGQIQI-VNRKNVIGDEFKQVKKY-DIGDIVGIEGKVFKTNQGEI 121
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ + +++TKSL LP+K+HGL D D RYRQRY+D+I PEV VF +R++I+SEIR+
Sbjct: 122 SIETETPLLMTKSLQMLPEKWHGLKDPDLRYRQRYLDLIVNPEVKSVFVQRSQIISEIRR 181
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ GF+EVETP+L AGGA ARPF T+HNSL +YLRIA+EL+LKR+++GGF+++Y
Sbjct: 182 FLDGQGFLEVETPILNTIAGGATARPFTTHHNSLNIGMYLRIASELYLKRLIVGGFDRVY 241
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+ HNPEFTT+E+Y+AY D++ MM ITE +V H A V G +++ G
Sbjct: 242 EIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITENMVEHVANKVKGTTVVEFDGN 301
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIES 419
EI L+ PW+R +M + VKE +G+DFNE+ D + +AKE +E
Sbjct: 302 EIELKAPWKRISMIDAVKEHSGVDFNEIKTDEEAIAIAKEKG---------------VEV 346
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G ++ E F+ VE KL+QPTF++DYP+EISPLAK LT RFE FI G E+A
Sbjct: 347 KETRGEIIAEFFDEFVEDKLIQPTFIVDYPVEISPLAKRKNDDPSLTYRFEAFINGAEIA 406
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL D LDQ+ R +QV KR A E AQ +D DFV A
Sbjct: 407 NAFSELNDALDQKQRFLDQVA----KREAGDDE---AQ-------------MMDYDFVNA 446
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LE GMPP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 447 LEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 484
>gi|422343811|ref|ZP_16424738.1| lysyl-tRNA synthetase [Selenomonas noxia F0398]
gi|355378227|gb|EHG25418.1| lysyl-tRNA synthetase [Selenomonas noxia F0398]
Length = 503
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/526 (45%), Positives = 337/526 (64%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S D + +R +K++ RS G+ P+ ++++ T A L+E Y LA EE
Sbjct: 9 SCPPEQDLNEMMRVRREKMDAFRSIGVAPFGHRFEVTDYAADLKEKYDSLAEDEEGK--- 65
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V +AGR++A R GK +F TL D +G IQ+Y + + L ++ + +DIGDI+G+
Sbjct: 66 -EVYIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDIGDIIGIR 124
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +T +GE++V V F +L+K+L PLP+K+HGL DVD RYRQRY+D++ EV D FR
Sbjct: 125 GVVFKTRRGEITVRVEDFNLLSKALRPLPEKFHGLKDVDTRYRQRYIDLMVNYEVRDTFR 184
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
KR +I+ IR+ ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL+LK
Sbjct: 185 KRTRIIQSIRRYLDERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLYLRIATELNLK 244
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG +++YE+GRIFRNEG+ RHNPEFTTIE+Y+A++DY+ +M ITE IV H A +V
Sbjct: 245 RLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTTIEIYQAFADYRDLMEITEGIVRHAAKSV 304
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQGV I L+ R +M++ V+EATG DF L RA+G E
Sbjct: 305 LGTTQIAYQGVNIDLDN-VRTISMNDSVREATGKDF--LSCQTVDEARAMARAIGVPFEE 361
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ +G +LN FE VE L+QPTF+ +P EISPLAK + +T+RFE
Sbjct: 362 R--------YGIGGILNAAFEEKVEETLMQPTFITGHPTEISPLAKRNPDDPRITDRFEF 413
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
F+ GRE+AN F+EL DP+DQ R EQ+ E+R A +E
Sbjct: 414 FVYGRELANGFTELNDPIDQEQRFLEQL----EQRQAGDAEAH----------------V 453
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D++TALEYG+PP G+G+G+DRLVMLLT+S SIRDV+ FP +K
Sbjct: 454 MDRDYITALEYGLPPTGGLGIGVDRLVMLLTDSPSIRDVLLFPTMK 499
>gi|395453545|dbj|BAM29884.1| lysyl-tRNA synthetase [Streptococcus pyogenes M1 476]
Length = 478
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/509 (47%), Positives = 329/509 (64%), Gaps = 39/509 (7%)
Query: 73 LRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFL 132
L +G++P+ ++DRT ++ +L+E Y EE + N+ VAGR++ +R GK+ F
Sbjct: 4 LAEQGIDPFGKRFDRTANSAELKEKYAD-KTKEELHELNETAIVAGRLMTKRGKGKVGFA 62
Query: 133 TLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVIL 192
L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+ L
Sbjct: 63 HLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSIKATKLTHL 121
Query: 193 TKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEV 252
+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ ++ L F+EV
Sbjct: 122 SKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEV 181
Query: 253 ETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEG 312
ETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEIGRIFRNEG
Sbjct: 182 ETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEG 241
Query: 313 LSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRR 372
+ HNPEFT+IE+Y+AY+DY +MN+TE I+ H A AV G IDYQG EI + P++R
Sbjct: 242 MDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVRGDGPIDYQGTEIRINEPFKR 301
Query: 373 ETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNE 429
M + +KE TG DF + + +AKE + +K I SVG+++N
Sbjct: 302 VHMVDAIKEVTGADFWPEMTVEEAIALAKEKQVPL--------EKHFI----SVGHIINA 349
Query: 430 VFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPL 489
FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+EL DP+
Sbjct: 350 FFEEFVEETLVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPI 409
Query: 490 DQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYGMPPAS 548
DQ +R E AQ + KE DD + +D DFV ALEYGMPP
Sbjct: 410 DQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYGMPPTG 448
Query: 549 GMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 449 GLGIGIDRLCMLLTNTTTIRDVLLFPTMK 477
>gi|387786417|ref|YP_006251513.1| lysyl-tRNA synthetase [Streptococcus mutans LJ23]
gi|379132818|dbj|BAL69570.1| lysyl-tRNA synthetase [Streptococcus mutans LJ23]
Length = 496
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINAPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|347520855|ref|YP_004778426.1| lysyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
gi|385832218|ref|YP_005869993.1| lysyl-tRNA synthetase [Lactococcus garvieae Lg2]
gi|343179423|dbj|BAK57762.1| lysyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
gi|343181371|dbj|BAK59709.1| lysyl-tRNA synthetase [Lactococcus garvieae Lg2]
Length = 495
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/515 (46%), Positives = 328/515 (63%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+E LR G++P+ +K+ RTH++ +L Y N +E E D H ++AGR++ +
Sbjct: 14 VRREKMETLRESGIDPFGHKFTRTHNSAELHAEYDE--NTKEELHEKDLHATIAGRLMTK 71
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F ++D G IQ+Y K+ + + + K D+GD LGV G + +T+ GELS
Sbjct: 72 RGKGKVGFAHIQDREGQIQIYVRKDEVGEENYQIFKQ-ADLGDFLGVEGQIMKTDMGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ + L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SEIR+
Sbjct: 131 IKASKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG EK+YE
Sbjct: 191 MDGRGYLEVETPVLNNEAGGAAARPFYTHHNSLDIDMALRIATELHLKRLIVGGMEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ HNPEFTT+E YEAY+D+ +M++TE I H A +V GK ++Y G E
Sbjct: 251 LGRVFRNEGMDMTHNPEFTTMESYEAYADFDDIMDLTEGIFQHVAHSVLGKDIVEYDGKE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I + + R M + +KE TG+DF KE + D +V +V
Sbjct: 311 INVGGKFARIHMVDAIKEQTGVDF---------WKEMDFEEAAALAKEHDIYVENHFTTV 361
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L+QPTFV +P EISPLAK + T+RFELFI G+E ANAFS
Sbjct: 362 GHIINEFFEKYVEDTLIQPTFVFGHPKEISPLAKMNAEDPRFTDRFELFINGKEYANAFS 421
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ R E AQ K KE DD + +D D+V ALE+
Sbjct: 422 ELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVEALEH 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 461 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 495
>gi|449910997|ref|ZP_21794952.1| lysyl-tRNA synthetase [Streptococcus mutans OMZ175]
gi|449258811|gb|EMC56370.1| lysyl-tRNA synthetase [Streptococcus mutans OMZ175]
Length = 496
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE T +DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINAPFKRAHIVDLIKEVTSVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|357057687|ref|ZP_09118545.1| lysyl-tRNA synthetase [Selenomonas infelix ATCC 43532]
gi|355374935|gb|EHG22226.1| lysyl-tRNA synthetase [Selenomonas infelix ATCC 43532]
Length = 503
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/530 (45%), Positives = 341/530 (64%), Gaps = 35/530 (6%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
R S+++T D + +R +K++ R+ G+ P+ ++++ T A L++ Y +LA EE
Sbjct: 5 RESTANTPEQDLSEMMRVRREKMDAFRAMGVAPFGHRFEVTDYAADLKKKYDYLAEDEEG 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
V VAGR++A R GK +F TL D +G IQ+Y + + L ++ + +D+GDI
Sbjct: 65 AE----VHVAGRLMAIRGHGKASFSTLNDRTGNIQIYFKLDVLGEQKYKEEFKRLDLGDI 120
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+GV G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV
Sbjct: 121 IGVRGVVFKTRRGEVTVRVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNHEVR 180
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
+ FRKR KI+ IR+ ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATE
Sbjct: 181 ETFRKRTKIIQSIRRYLDERDFLEVETPVLSTLAGGAAARPFITHHNALDIDLYLRIATE 240
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L LKR+++GG +++YE+GRIFRNEG+ RHNPEFT+IE+Y+A++D++ +M ITE IV
Sbjct: 241 LSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTSIEIYQAFADHRDLMAITEGIVRQA 300
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I YQGV I L R +M++ V+EATG DF L + R +G
Sbjct: 301 AEDVLGTTKITYQGVGIDLNN-VRTISMNDAVREATGKDF--LSCNTVDEARVMAREIGV 357
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
E + +G +LN FE VE L+QPTF+ +P EISPLAK + +T+
Sbjct: 358 PFEERH--------GIGGILNAAFEEKVEDTLMQPTFITGHPTEISPLAKRNADDPRITD 409
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ GRE+AN F+EL DP+DQ R EQ+RQ +E+ D
Sbjct: 410 RFEFFVYGRELANGFTELNDPIDQEQRFLEQLRQ-------------------REAGDAE 450
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V +D DF+TALEYG+PP G+G+G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 451 AHV-MDRDFITALEYGLPPTGGLGIGVDRLVMLLTDSASIRDVLLFPTMK 499
>gi|182683632|ref|YP_001835379.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
gi|238691143|sp|B2IN95.1|SYK_STRPS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|182628966|gb|ACB89914.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
Length = 496
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ +P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINKPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|315274625|ref|ZP_07869480.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
gi|313615745|gb|EFR89018.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
Length = 498
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 333/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +L+ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEELETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + A+E L K + + G
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHDVPVTEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQIKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|325678473|ref|ZP_08158089.1| lysine--tRNA ligase [Ruminococcus albus 8]
gi|324109841|gb|EGC04041.1| lysine--tRNA ligase [Ruminococcus albus 8]
Length = 525
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/529 (46%), Positives = 337/529 (63%), Gaps = 44/529 (8%)
Query: 63 RALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIY-------RHLANGEESN-----S 109
+ +R++K++ L+ +G +P+ K+D T S + + +Y + LA +E+
Sbjct: 24 KKIRMEKLKALQDEGADPFQITKYDVTASCEEAKVLYEREEAKCKDLAGNDEAVLAEKLE 83
Query: 110 END-HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
EN VS+AGR++++R GK +F+ LRD SG +QLY + + FD+ DIGDI+
Sbjct: 84 ENRVRVSIAGRIMSKRMMGKASFMDLRDKSGKVQLYVRMNEVGKEAFDRYVKKGDIGDIV 143
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV+G + RT GE+SV SF +L+K+L PLP+K+HGL D D RYRQRY D+I PEV D
Sbjct: 144 GVTGFVFRTRMGEISVHAESFTLLSKNLQPLPEKWHGLKDQDTRYRQRYTDLICNPEVKD 203
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI+S IR+ ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL
Sbjct: 204 TFIKRSKIISTIRRYLDERGFMEVETPMLVSNAGGAAARPFETHYNALDEDVKLRISLEL 263
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ RHNPEFT +E+Y+AY+DY MM++TE++ H A
Sbjct: 264 YLKRLIVGGLERVYEIGRVFRNEGVDARHNPEFTLMELYQAYTDYHGMMDLTEDMFRHLA 323
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y EI L +P+ R TM + VK+ G+DFNE +K +E A
Sbjct: 324 QTVCGGTTIPYGEHEIDLGKPFERLTMIDAVKKYAGVDFNE----IKTTEEAKALAKEKH 379
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E +D+ G++LN FE VE L+QPTF++D+PIEISPL K ER
Sbjct: 380 IEFEDRH------KRGDILNLFFEEYVEEHLIQPTFIMDHPIEISPLTKKKPDAPDYVER 433
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI G EM NA+SEL DP+DQR R + AQE+ S D
Sbjct: 434 FELFINGWEMCNAYSELNDPIDQRERFK-------------------AQEEALSSGDEEA 474
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
T D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 475 NRT-DEDFLRALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 522
>gi|199598782|ref|ZP_03212194.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
gi|199590287|gb|EDY98381.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
Length = 498
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/519 (46%), Positives = 339/519 (65%), Gaps = 46/519 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K++ LR G++P+ +++DRTHSA +++E + GE+ E V++AGR++
Sbjct: 18 RREKMDALREAGIDPFGHRFDRTHSAAKVREEF-----GEDDKETLLEEKPEVTIAGRMM 72
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 73 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 131
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 132 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 191
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 192 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 251
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 252 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--Y 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG++I L+ P+ R M + +K+ TG+DF E+ D R L D E E
Sbjct: 310 QGMDIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------EARKLADDHEVH----YE 358
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G E
Sbjct: 359 PYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEY 418
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAF+EL DP+DQR R E Q +EK++ E+ + +DDD+V
Sbjct: 419 ANAFTELNDPIDQRQRFEAQ-----------AAEKTAGNEEAQ---------GIDDDYVE 458
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 459 VLEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 497
>gi|330718514|ref|ZP_08313114.1| lysyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
Length = 494
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/506 (45%), Positives = 336/506 (66%), Gaps = 45/506 (8%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLA------NGEESNSENDHVSVAGRVVARRAFGKLAF 131
L+P+ +++RT A +L + Y + NG+E V +AGR++A+R GK+ F
Sbjct: 27 LDPFGKRFERTAKAQELHDKYDDTSLETLENNGQE-------VIIAGRMIAKRGAGKIIF 79
Query: 132 LTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVI 191
+RD SG IQ+Y +++ L + + +K D+GD LG+ G + +TE GEL+V V
Sbjct: 80 ADIRDVSGKIQIYAKRDEL-GENYTIIKR-SDLGDFLGIKGKVMKTEAGELTVFVTELTH 137
Query: 192 LTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVE 251
LTK+L P+PDK+HG+ DV+ RYR+RY+D+I+ + F++R++I+S IR ++S F+E
Sbjct: 138 LTKALRPMPDKFHGIADVETRYRKRYLDLIANEDSFKKFQQRSRIISAIRDYMDSNEFLE 197
Query: 252 VETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNE 311
VETP+LQ AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GG E++YE+GRIFRNE
Sbjct: 198 VETPILQTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGMERVYEMGRIFRNE 257
Query: 312 GLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWR 371
G+ +HNPEFTT+E Y AY D+ +MN TE I A V+ LTI+YQG +I L +P+
Sbjct: 258 GMDPKHNPEFTTMESYAAYWDFTDVMNETEGIFKAAAKVVSDDLTINYQGTDINLAKPFA 317
Query: 372 RETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVF 431
R+ M +L+K TG+DF E ++ + + R L D + E+ VG+++NE F
Sbjct: 318 RQHMVDLIKTYTGVDFWE---EMSIEQ---ARQLAD----EHHVTYEAYWQVGHIINEFF 367
Query: 432 EIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQ 491
E VE KL++PTFV +P+E+SPLAK + T+RFELFI G E ANAF+EL DP+DQ
Sbjct: 368 ETFVEEKLIEPTFVYGHPVEVSPLAKKNSDDPRFTDRFELFIVGSEYANAFTELNDPIDQ 427
Query: 492 RARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMG 551
RAR E Q V+E+ + ++ + ++D+DF+ ALEYGMPP G+G
Sbjct: 428 RARFEAQ-----------VAERENGNDEAE---------SIDEDFIEALEYGMPPTGGLG 467
Query: 552 LGIDRLVMLLTNSASIRDVIAFPILK 577
+GIDRL+MLLTNS +IRDV+ FP ++
Sbjct: 468 VGIDRLIMLLTNSDTIRDVVLFPTMR 493
>gi|414564355|ref|YP_006043316.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847420|gb|AEJ25632.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 501
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/514 (45%), Positives = 328/514 (63%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y E+ +AGR++ +R
Sbjct: 19 VRREKMAALAEQGIDPFGKRFDRTTNSGELKEKYSD-KTKEDLQELQATAIIAGRLMTKR 77
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 78 GKGKVGFAHLQDRQGQIQIYVRKDSVGDENYDIFKK-ADLGDFIGVEGDIMRTDMGELSI 136
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS + F R+K++SEIR+ +
Sbjct: 137 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRSSFERFVTRSKMISEIRRYL 196
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 197 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEI 256
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+YEAY+DY MM +TE I+ H A AV G+ IDYQG EI
Sbjct: 257 GRIFRNEGMDATHNPEFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEI 316
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
L P+RR M + +KE G+DF E T L N+ +E SV
Sbjct: 317 KLHEPFRRVHMVDAIKEVAGVDF---------WSEMTFED-AKALANEKHVPLEKHFTSV 366
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+E+SPLAK + + T+RFELFI +E ANAF+
Sbjct: 367 GHIINAFFEAFVEDTLIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFT 426
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ +R + Q AA E DD + +D DFV ALEYG
Sbjct: 427 ELNDPIDQLSRFKAQ---------AAAKEL---------GDDEA--TGIDYDFVEALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 467 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500
>gi|149003320|ref|ZP_01828209.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
gi|237650050|ref|ZP_04524302.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
gi|237822721|ref|ZP_04598566.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
gi|418143526|ref|ZP_12780326.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13494]
gi|418166326|ref|ZP_12802982.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17971]
gi|419457086|ref|ZP_13997032.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02254]
gi|421206157|ref|ZP_15663221.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2090008]
gi|421229362|ref|ZP_15686039.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2061376]
gi|421291516|ref|ZP_15742256.1| lysine--tRNA ligase [Streptococcus pneumoniae GA56348]
gi|421311461|ref|ZP_15762068.1| lysine--tRNA ligase [Streptococcus pneumoniae GA58981]
gi|147758503|gb|EDK65501.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
gi|353809267|gb|EHD89527.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13494]
gi|353829922|gb|EHE10052.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17971]
gi|379532572|gb|EHY97797.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02254]
gi|395577237|gb|EJG37782.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2090008]
gi|395598347|gb|EJG58552.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2061376]
gi|395894818|gb|EJH05795.1| lysine--tRNA ligase [Streptococcus pneumoniae GA56348]
gi|395912039|gb|EJH22902.1| lysine--tRNA ligase [Streptococcus pneumoniae GA58981]
Length = 496
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + T+ A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKTIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|417002375|ref|ZP_11941764.1| lysine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479516|gb|EGC82612.1| lysine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 632
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/517 (45%), Positives = 340/517 (65%), Gaps = 47/517 (9%)
Query: 65 LRIK--KVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
L+IK K+E+L+ +G +P+ + S+ ++++ + + + V +AGR++
Sbjct: 11 LKIKRDKLEDLKKEGRDPHKIVNFKGRISSKEIKDNF--------DDYDGKEVRIAGRIM 62
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
A+R G ++F+ ++D+SG IQ+ ++ ++ ++F Q+K + DIGDI+G+ G + +T +GE
Sbjct: 63 AKRGHGNMSFMDIQDESGQIQI-VNRKNVIGEEFKQVKKY-DIGDIVGIDGKVFKTNQGE 120
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+S+ V++TKSL LP+K+HGL D D RYRQRY+D+I PEV DVF +R++I+SEIR
Sbjct: 121 ISIETEKPVLMTKSLQILPEKWHGLKDPDLRYRQRYLDLIVNPEVKDVFVQRSQIISEIR 180
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ GF+EVETP+L AGGA ARPF T+HNSL +YLRIA+EL+LKR+++GGF+K+
Sbjct: 181 RFLDGRGFLEVETPILNTIAGGATARPFTTHHNSLNIGMYLRIASELYLKRLIVGGFDKV 240
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGR+FRNEG+ HNPEFTT+E+Y+AY D++ MM ITE +V A V G +++ G
Sbjct: 241 YEIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITETMVETVAQKVKGTTVVEFDG 300
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGN-DLKVAKETTLRALGDGLENKDKFVIESS 420
EI L+ PW+R TM + VKE +G+DFNE+ + D V+K EN +E
Sbjct: 301 NEIELKAPWKRMTMIDAVKEYSGVDFNEISDYDEAVSKAK---------ENN----VEVK 347
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
++G ++ E F+ VE KL+QPTF+ DYP+EISPLAK LT RFE FI G E+AN
Sbjct: 348 GTIGEIIAEFFDEFVEDKLIQPTFITDYPVEISPLAKRKNDDENLTYRFEAFINGAEIAN 407
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL D DQ+ R +QV KR A E AQ +D DFV AL
Sbjct: 408 AFSELNDAADQKGRFLDQVA----KREAGDDE---AQ-------------MMDYDFVNAL 447
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E GMPP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 448 EVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 484
>gi|450051553|ref|ZP_21840920.1| lysyl-tRNA synthetase [Streptococcus mutans NFSM1]
gi|450122091|ref|ZP_21866593.1| lysyl-tRNA synthetase [Streptococcus mutans ST6]
gi|449201820|gb|EMC02794.1| lysyl-tRNA synthetase [Streptococcus mutans NFSM1]
gi|449228352|gb|EMC27725.1| lysyl-tRNA synthetase [Streptococcus mutans ST6]
Length = 496
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMVALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|291541637|emb|CBL14747.1| Lysyl-tRNA synthetase (class II) [Ruminococcus bromii L2-63]
Length = 637
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/524 (46%), Positives = 340/524 (64%), Gaps = 41/524 (7%)
Query: 54 TSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH 113
T TSD V +R +K++ L+ G +P+ T + + L E ++ N EE EN
Sbjct: 8 TGTSD---VIKVRYEKLDALKKAGRDPFVIT---TSARDVLTETIKN--NFEEY--ENKD 57
Query: 114 VSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGS 173
V VAGR++++R GK++F+ L D SG IQ++ + + L +++ LK + DIGDI+ V G
Sbjct: 58 VCVAGRLLSKRGKGKVSFMDLWDRSGKIQIFAKFDDLGEEEYGFLKKW-DIGDIVEVKGF 116
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
+ +T+ GE+SV +L+KSL PLP+KYHGLT+ D RYRQRYVD+I PEV D F KR
Sbjct: 117 VFKTQMGEISVHAKEVKLLSKSLKPLPEKYHGLTNTDLRYRQRYVDLIMNPEVKDTFVKR 176
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
+KI+ IR+ +++ GF+EVETP+L AGGA ARPF+T+ N+L DL LRI+ EL+LKR+
Sbjct: 177 SKIIGSIRRYLDNQGFMEVETPMLVANAGGASARPFLTHFNALDEDLKLRISLELYLKRL 236
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GG EK+YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 237 IVGGLEKVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLG 296
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
TI Y G+E+ L +P+ R TM + VK+ +G+DFNE+ +D +E A G+E
Sbjct: 297 TTTITYNGIEMDLGKPFERITMLDAVKKYSGVDFNEIHSD----EEAKAIAKEKGVE--- 349
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
E G++LN FE E ++QPTFV+D+PIEISPL K + ERFE F+
Sbjct: 350 ---FEERHKKGDILNLFFEEFAEEHMIQPTFVMDHPIEISPLTKKKPENPDYVERFEFFM 406
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
G EMANA+SEL DP+DQR R + Q + L + DD + T D
Sbjct: 407 NGWEMANAYSELNDPIDQRERFKAQ------------------EALLAQGDDEAN--TTD 446
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G GIDR+ MLLT+SA+IRDV+ FP +K
Sbjct: 447 EDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMK 490
>gi|116495963|ref|YP_807697.1| lysyl-tRNA synthetase [Lactobacillus casei ATCC 334]
gi|116106113|gb|ABJ71255.1| Lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
Length = 498
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/519 (46%), Positives = 338/519 (65%), Gaps = 46/519 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 18 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 72
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 73 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 131
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 132 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 191
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 192 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 251
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 252 YEIGRVFRNEGIDTKHNPEFTELETYAAYRDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D R L D + E
Sbjct: 310 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------DARKLAD----EHDVHYE 358
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G E
Sbjct: 359 TYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEY 418
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+V
Sbjct: 419 ANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDYVE 458
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 497
>gi|375088141|ref|ZP_09734483.1| lysine-tRNA ligase [Dolosigranulum pigrum ATCC 51524]
gi|374562971|gb|EHR34294.1| lysine-tRNA ligase [Dolosigranulum pigrum ATCC 51524]
Length = 500
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 330/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ++R KG++P+ K++RTH+A +L E Y EE ++AGR++A+R
Sbjct: 16 VRREKMADMREKGIDPFGDKFERTHTAQELNETYAEQTK-EELKEAQIPATIAGRMMAKR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D SG +Q+Y + + + + + D+GD LGV G + +T GE++V
Sbjct: 75 GSGKAGFANLKDKSGEVQIYVRLDEVGEAEHELFQQ-ADLGDFLGVEGVLMKTNTGEVTV 133
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP +Y+GL +V+++YRQRY+D+I+ E + F KR++I+SEIR+ +
Sbjct: 134 RAKKLTHLSKSLRPLPSQYYGLHNVEQKYRQRYLDLIANDESMERFTKRSQIISEIRRYL 193
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++LG++EVETP L AGGA ARPF+T+HN+L DLYLRIA EL LKR+++GG EK+YEI
Sbjct: 194 DNLGYLEVETPFLHQVAGGAAARPFITHHNTLDLDLYLRIALELPLKRLIVGGMEKVYEI 253
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT IE+Y AY DY +M++TE ++ A VNG + Y EI
Sbjct: 254 GRVFRNEGIDTTHNPEFTMIELYTAYHDYIDVMDLTENLIREVAKKVNGTAIVPYGEHEI 313
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R+ M +L+KEA+G+DF + +D + RAL D IE G
Sbjct: 314 NLEDAWDRKHMVDLIKEASGVDFWQDMSDDQA------RALADEYH----IEIEEFAKFG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++ FE E L+QPT+V +PIEISP AK + T+RFELFI G+E ANAFSE
Sbjct: 364 HVVEAFFEHYCEDSLIQPTYVYGHPIEISPFAKKNAEDPRFTDRFELFIAGKEFANAFSE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP DQR R EEQ+++ Q+ E++D +D+D++ A+ YGM
Sbjct: 424 LNDPDDQRERFEEQLKER--------------QQGNDEAND------IDEDYLEAMAYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTNS SIRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLVMLLTNSKSIRDVLLFPTMK 496
>gi|288572810|ref|ZP_06391167.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568551|gb|EFC90108.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 503
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/525 (45%), Positives = 338/525 (64%), Gaps = 34/525 (6%)
Query: 55 STSDREAVRALRIKKVEELRSK-GLEPYAYK-WDRTHSANQLQEIYRHLANGEESNSEND 112
S + E + + R+ K+ LR + G +PY + W H+ +++ + ++ E + E+
Sbjct: 8 SLTPEEEILSQRMDKLRRLREEEGYDPYVNESWGVKHTLAEVRRDHDDISVDE--SREDV 65
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
+SVAGR++ R GK +F ++D++G++QLY + + + + K ++D GDI+GV G
Sbjct: 66 SLSVAGRLMTVRKQGKASFANMQDETGSMQLYFRLDSMGEECYRFFKKWIDAGDIIGVEG 125
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
RT +GEL++ V V+L+K+L PLP+K+HGLTD + RYR+RYVD++ PEV DVFR+
Sbjct: 126 HPFRTRRGELTIAVTRCVLLSKALRPLPEKWHGLTDTEVRYRKRYVDLMVNPEVRDVFRQ 185
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I+S +RKT+E G +EVETP+L AGGA ARPFVT+HN+L D+YLRIATELHLKR
Sbjct: 186 RARIISSVRKTLEDHGTLEVETPMLSYLAGGANARPFVTHHNALDLDMYLRIATELHLKR 245
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++G ++YE+G+ FRNEG+ HNPEFT +E+Y Y DY MM++TEEIV AL
Sbjct: 246 LVVGMMGRVYEMGKNFRNEGMDAMHNPEFTAMEVYWPYCDYVDMMDLTEEIVRKAALDAT 305
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G T+ +QG E+ L +P+RR TM LVKE G+DF+ + +D E A G+GL
Sbjct: 306 GSTTVTWQGTELDLGKPFRRATMVELVKEHCGVDFDGIDDD----NEARRIAEGEGL--- 358
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
+E S +L + E VE LVQPTFV+ +P EISPL+K + + T RFELF
Sbjct: 359 ---ALEGDESRFKVLTMMVEEFVEEHLVQPTFVMGHPTEISPLSKRNPDNPDYTHRFELF 415
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
+CG E+AN FSEL DP+DQRAR E+Q KLK + D
Sbjct: 416 VCGSEVANGFSELNDPIDQRARFEDQA-------------------KLKAAGDEEGH-PF 455
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFV ALE G+PP G+G+GIDRL+M LT+S SIRDVI FP +K
Sbjct: 456 DEDFVNALEQGLPPTGGLGIGIDRLIMFLTDSRSIRDVILFPTMK 500
>gi|307706787|ref|ZP_07643592.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
gi|307617872|gb|EFN97034.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
Length = 496
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|335357777|ref|ZP_08549647.1| lysyl-tRNA synthetase [Lactobacillus animalis KCTC 3501]
Length = 498
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/516 (45%), Positives = 336/516 (65%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR++G++P+ ++++R L + Y + + +E N ++AGR+VA+R
Sbjct: 13 VRREKMQELRAEGIDPFGHRFERDSMNQDLHDKYGEM-DKDELNGLEITATIAGRMVAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G +QLY K+ + D + K D+GD LG+ G + +T+ GEL++
Sbjct: 72 GKGKVGFADLQDRTGRMQLYIRKDEVGEDMYHIFKR-SDLGDFLGIKGHVIKTDMGELTI 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V L+K+L PLPDK+HGL DV++ YRQRY+D+IS E D F R++I+S IR+ +
Sbjct: 131 KVTELTFLSKALRPLPDKWHGLQDVEQIYRQRYLDLISNKESYDRFVNRSRIISAIRRYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DGEGFLEVETPVLHTQAGGAAARPFITHHNALDIELYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D++ +M+ TE I A V+ ++YQG ++
Sbjct: 251 GRVFRNEGIDTRHNPEFTMLESYAAYFDFEDVMDETEGIFKAAASVVSNNNIVNYQGKDV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFVIESSP 421
++P++R M +++KE TG+DF E E TL RAL D + E
Sbjct: 311 DFDKPFKRVHMVDIIKEYTGVDFWE---------EMTLEQARALAD----EHGVHYEQYW 357
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE E K+V PTFV +P+EISPLAK + + T+RFELFI G E ANA
Sbjct: 358 KVGHIINEFFEQFCEDKIVDPTFVYGHPVEISPLAKKNVKDPRFTDRFELFILGSEYANA 417
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E QV E+R A E +D+D++ A+E
Sbjct: 418 FTELNDPIDQRERFEAQV----EERQAGNDEAEG----------------IDEDYIEAME 457
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 458 YGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493
>gi|450087461|ref|ZP_21854289.1| lysyl-tRNA synthetase [Streptococcus mutans NV1996]
gi|449217889|gb|EMC17916.1| lysyl-tRNA synthetase [Streptococcus mutans NV1996]
Length = 496
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+E L + ++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMEALTEQEIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGNGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|307701961|ref|ZP_07638969.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
gi|307616606|gb|EFN95795.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
Length = 496
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + EE + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEELHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDF---WPDMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|81429206|ref|YP_396207.1| lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
gi|123769667|sp|Q38V83.1|SYK_LACSS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|78610849|emb|CAI55901.1| Lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
Length = 505
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 336/515 (65%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ L+ +G++P+ +++RTH A L E + + ++ + +N V++AGR++++R
Sbjct: 16 VRREKMQFLKDEGIDPFGSRFERTHLAAALHEEFEAIEK-DDLDVKNQEVTIAGRMMSKR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK+ F +RD SG IQ+Y K+ + D + K+F D+GD LG++G + +T+ GEL
Sbjct: 75 GKGKVGFADIRDRSGKIQIYVRKDEVGEDNY---KIFKKADLGDHLGITGQIMKTDMGEL 131
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
+V L+K+L PLPDKYHGLT+V++ YRQRY+D+I+ PE D F KR+KI+S +R+
Sbjct: 132 TVKATHLTFLSKALRPLPDKYHGLTNVEQIYRQRYLDLIANPESMDRFTKRSKIISAVRE 191
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ F EVETPVL G AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++Y
Sbjct: 192 YLDTHDFTEVETPVLHGQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVY 251
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+ T+HNPEFT +E Y AY DY+ +M+ TE I+ A V G I YQG
Sbjct: 252 EIGRVFRNEGIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQ 311
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
I L+ + R M + +K TG+DF + + R L D K E
Sbjct: 312 AIDLDSDFARVHMVDAIKAETGVDF------WQPMTVESARELADQHHVK----YEEYWQ 361
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++N FE VE LVQPTF+ +P+EISPLAK + T+R+ELF+ G E ANAF
Sbjct: 362 VGHIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAF 421
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQR R E AQ K +E+ + E +D+D+V ALEY
Sbjct: 422 TELNDPIDQRERFE-------------------AQAKERENGNDEAE-GIDEDYVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ASIRDV+ FP ++
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDAASIRDVLLFPTMR 496
>gi|418006180|ref|ZP_12646141.1| class II lysyl-tRNA synthetase [Lactobacillus casei UW1]
gi|410544342|gb|EKQ18671.1| class II lysyl-tRNA synthetase [Lactobacillus casei UW1]
Length = 499
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 338/521 (64%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 19 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 311 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 357
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 358 YEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNSKDPRFVERFELFVGGG 417
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+
Sbjct: 418 EYANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDY 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 458 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|418003301|ref|ZP_12643390.1| class II lysyl-tRNA synthetase [Lactobacillus casei UCD174]
gi|410542552|gb|EKQ16994.1| class II lysyl-tRNA synthetase [Lactobacillus casei UCD174]
Length = 499
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/519 (46%), Positives = 338/519 (65%), Gaps = 46/519 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 19 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D R L D + E
Sbjct: 311 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------DARKLAD----EHDVHYE 359
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G E
Sbjct: 360 TYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEY 419
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+V
Sbjct: 420 ANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDYVE 459
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|410582342|ref|ZP_11319449.1| lysyl-tRNA synthetase (class II) [Thermaerobacter subterraneus DSM
13965]
gi|410506402|gb|EKP95910.1| lysyl-tRNA synthetase (class II) [Thermaerobacter subterraneus DSM
13965]
Length = 552
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/556 (43%), Positives = 347/556 (62%), Gaps = 57/556 (10%)
Query: 34 SSTSITVSAGTRNRRASSSSTSTSD-------REAVRALRIKKVEELRSKGLEPYAYKWD 86
S+ +++ + G R S + +T +E +RA R K+E R +G++P+ ++D
Sbjct: 39 STEAVSGANGAAGREVPSGADATGGTGEGARLQEVLRARR-AKLEFWRQRGVDPFGRRYD 97
Query: 87 RTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCE 146
TH A ++ + + L E V VAGR++A R G+ AF L+D SG IQL
Sbjct: 98 VTHHAREIVDRFAEL--------EGHPVRVAGRLMALRRHGRAAFADLQDASGRIQLLAR 149
Query: 147 KERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGL 206
L D + + +D GD +G G++ RT +GE+SV V FV+L KSL PLP+K+HGL
Sbjct: 150 VGPLAEDTYSAF-LELDRGDWVGAEGTVIRTRRGEISVEVTGFVLLGKSLYPLPEKWHGL 208
Query: 207 TDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEA 266
+VD RYRQRYVD+I P+V + FR R++I+ EIR ++ GF EVETPVL GGA A
Sbjct: 209 QNVDLRYRQRYVDLIVNPQVLETFRLRSRIIREIRAFLDQRGFYEVETPVLHLIYGGAAA 268
Query: 267 RPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEM 326
RPFVT+HN+L DLYLRIA ELHLKR+++GG E++YEIGR+FRNEG+STRHNPEFT +E+
Sbjct: 269 RPFVTHHNALDLDLYLRIALELHLKRLIVGGMERVYEIGRVFRNEGISTRHNPEFTMLEL 328
Query: 327 YEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGID 386
Y+A+SDY+ MM +TE++V+H A AV+G + YQG I PWRR + ++ G+
Sbjct: 329 YQAFSDYEGMMELTEQLVSHVAQAVHGSPVVHYQGQAIDFTPPWRRLSFAEALESMAGVR 388
Query: 387 FNELGND---LKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPT 443
++ D +VA+E L + P+ +L+E+ ++ V+P+LVQPT
Sbjct: 389 LEDVLTDEGARRVARERALE-------------LTRDPTPAAVLDELVDVYVQPRLVQPT 435
Query: 444 FVLDYPIEISPLAK--PHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQ 501
F+ DYP+ +SPLA+ P R H LT RFE + G E+ANAFSEL DP DQR R EEQ
Sbjct: 436 FLYDYPVVLSPLARRIPDRPH--LTYRFEAMVAGMEIANAFSELNDPDDQRQRFEEQ--- 490
Query: 502 HNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLL 561
++ ++ E+ + +D+D++ ALE G+P G+G+GIDRLVMLL
Sbjct: 491 --------LAARARGDEEAHQ---------MDEDYIHALEIGLPATGGLGIGIDRLVMLL 533
Query: 562 TNSASIRDVIAFPILK 577
T++ SIRDVI FP+++
Sbjct: 534 TDNPSIRDVILFPLMR 549
>gi|302390919|ref|YP_003826739.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302202996|gb|ADL11674.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 491
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 344/515 (66%), Gaps = 37/515 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R KK++ L KG+ Y K++R+H A ++ + N EE + V + GR++A R
Sbjct: 14 RRKKLDMLEEKGITVYGEKYERSHVAQEV------IDNFEELKEDETEVRLTGRLMAVRE 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK +F + D SG IQLY +++ L D + +L + +DIGD +G+ G + +T +GE++V
Sbjct: 68 HGKASFADIEDMSGRIQLYAKEDNLGEDLY-ELFMSLDIGDQIGIEGLLFKTGRGEVTVQ 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+ +F +L K+L PLP+K+HGL DV+ RYRQRYVD+I +V + F R+KI+ +R+ +E
Sbjct: 127 IENFELLAKALRPLPEKWHGLKDVEMRYRQRYVDLIVNSDVRNTFVLRSKIIHTMREHLE 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
F+EVETP++ AGGAEARPFVT+HN+L DLYLRIA EL+LKR+++GGFEK++EIG
Sbjct: 187 EEDFLEVETPLMHPIAGGAEARPFVTHHNALDMDLYLRIAPELYLKRLIVGGFEKVFEIG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
+ RNEG+ST+HNPEFT++E+Y+A +DY+ MM ITE ++ + A V G L I+Y G EI
Sbjct: 247 KNLRNEGISTKHNPEFTSMELYQANADYEDMMEITESVIVNIAQEVLGTLEIEYDGQEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
L W R TM + E G+DF+E+ +D K A++ A G++ E SVG
Sbjct: 307 LSPSWTRMTMREAINEYAGVDFSEV-DDFKTAQKL---AEDHGVD------YEEITSVGE 356
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L+NE FE VE +L+QPTF+ +YPIE+SPLAK + TERFELF+ G E+ANAFSEL
Sbjct: 357 LINEFFEEFVEDELIQPTFITEYPIEVSPLAKRKPEDSDFTERFELFVAGNELANAFSEL 416
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ+ R +EQ+ E+R A DD ++ +D D++ ALEYGMP
Sbjct: 417 NDPIDQKQRFKEQM----EQREAG--------------DDEAH--MMDYDYIRALEYGMP 456
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
P G+G+GIDRLVMLLT+S SIRDVI FP ++ +Q
Sbjct: 457 PTGGLGIGIDRLVMLLTDSTSIRDVILFPHMRPEQ 491
>gi|450176184|ref|ZP_21885638.1| lysyl-tRNA synthetase [Streptococcus mutans SM1]
gi|449245746|gb|EMC44074.1| lysyl-tRNA synthetase [Streptococcus mutans SM1]
Length = 496
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 335/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRHYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|332523099|ref|ZP_08399351.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
gi|332314363|gb|EGJ27348.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
Length = 496
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/533 (45%), Positives = 345/533 (64%), Gaps = 42/533 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
++ + +D+E VR +K+ L KG++P+ +++RT ++ QL+ Y E+ +
Sbjct: 2 SNQHTEELNDQEIVRR---EKMMALAEKGIDPFGKRFERTANSGQLKAKYAE-KTKEDLH 57
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
N+ +AGR++ +R GK+ F ++D G IQ+Y K+ + + +D K D+GD L
Sbjct: 58 DLNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYDIFKK-ADLGDFL 116
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D+IS E +
Sbjct: 117 GVEGEVMRTDMGELSIKATHLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFN 176
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R+KI+SEIR+ ++S F+EVETPVL AGGA ARPF+T+HN+ D+ LRIATEL
Sbjct: 177 RFVTRSKIISEIRRYLDSKDFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATEL 236
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GG E++YEIGRIFRNEG+ HNPEFT+IE+YEAY+D+Q +MN+TE I+ H A
Sbjct: 237 HLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYEAYADFQDIMNLTEGIIQHAA 296
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGD 407
AV G IDYQG I + P++R M + +K+ TGIDF E+ D RAL
Sbjct: 297 KAVTGDGPIDYQGQMIHINEPFKRLHMVDAIKDVTGIDFWKEMSFD-------DARALA- 348
Query: 408 GLENKDKFV-IESS-PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
++K V +E+ +VG+++N FE VE L+QPTFV +P+E+SPLAK + A
Sbjct: 349 ----QEKHVPLETHFTTVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDARF 404
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
T+RFELFI +E ANAF+EL DP+DQ +R E AQ + KE D
Sbjct: 405 TDRFELFIVTKEYANAFTELNDPIDQLSRFE-------------------AQAQAKELGD 445
Query: 526 HSYEVT-LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E T +D D+V ALEYGMPP G+G+GIDRL MLLTN+ SIRDV+ FP +K
Sbjct: 446 --IEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVLLFPTMK 496
>gi|260890988|ref|ZP_05902251.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
gi|260859015|gb|EEX73515.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
Length = 494
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 336/516 (65%), Gaps = 46/516 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-SVAGRVVARR 124
++KKVEEL+ G+EPY K+++ N + EI ++ + D V AGR+VA R
Sbjct: 15 KLKKVEELKEIGIEPYGRKYEK---LNDIAEINQY-------DETCDKVFKTAGRIVAFR 64
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D +G IQ Y +K+ + +Q++ K + +GD +G+ G + RT GEL++
Sbjct: 65 RMGKNGFGQIQDPTGKIQYYVKKDEVGEEQYEIYKK-MGLGDFIGLEGKLFRTNTGELTL 123
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+SF +L+K++ PLP+K+HGLT+++ RYRQRYVD++ EV D +KR +I+ R +
Sbjct: 124 RVDSFEVLSKNVRPLPEKFHGLTNIETRYRQRYVDLVMNREVMDTMKKRFQIIRFFRSYL 183
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF EVETP++ AGGA ARPFVT+HN+L +L+LRIA EL+LKR+L+GGFEK++EI
Sbjct: 184 EKQGFTEVETPMMHPVAGGATARPFVTHHNALDMELFLRIAPELYLKRLLVGGFEKVFEI 243
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+S +HNPEFT +E+Y+AY+D+ MM++TE++++ ++GK I+Y+ I
Sbjct: 244 NRSFRNEGISIKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFELHGKYEIEYEDKTI 303
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
+ +PWRR TM +VKE TG DF+ + +D + AKE + KD+ +
Sbjct: 304 NMAKPWRRVTMKGIVKETTGFDFDTVSSDEDAINKAKEMNIPL------EKDRTYTKYG- 356
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+LN +FE VE L+ PTF+ +YP EISPL+K + +RFELFI GRE ANA
Sbjct: 357 ----ILNLIFEEKVEGTLLNPTFITEYPKEISPLSKNQKGETEWVDRFELFISGREFANA 412
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP DQ+ R EEQV KLKE+ D + +D D++ ALE
Sbjct: 413 YSELNDPRDQKERFEEQV-------------------KLKEAGDDEAQ-GMDLDYIRALE 452
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPPA G+G+GIDRLVML TNSASIRDVI FP L+
Sbjct: 453 YGMPPAGGLGIGIDRLVMLQTNSASIRDVILFPTLR 488
>gi|170288919|ref|YP_001739157.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
gi|238688842|sp|B1LAX6.1|SYK_THESQ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|170176422|gb|ACB09474.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
Length = 502
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/512 (46%), Positives = 335/512 (65%), Gaps = 35/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S AGRV++ R
Sbjct: 9 RLNEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRH 66
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK AF ++DD+G IQ Y + + ++ D K V IGD +GV G +++ GEL++
Sbjct: 67 HGKTAFFHMKDDTGRIQAYVRADSVGKEKMDLFKRHVKIGDFIGVRGFPFKSKTGELTIY 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L+K+L PLP+K+HG+ D + YRQRY+++I E + FRKR K V IR+ +
Sbjct: 127 VQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLN 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GF+EVETP+L GGAEARPFVT+ N D+YLRIA EL+LKR++IGGFEKIYEIG
Sbjct: 187 SRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMYLRIAPELYLKRLIIGGFEKIYEIG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
+ FRNEG+S +H+PEFT+IE+Y+AY+DY MM++TEE++ G L I YQG EI
Sbjct: 247 KNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PW+R M + +KE G+D E +++ + K L G LE K++ +
Sbjct: 307 FTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK---LEEYGVELEIKNR---------AH 354
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L++++ ++ VE +LV PTF++D+P+ ISPLAK HR LTERFEL I GRE+ANAFSEL
Sbjct: 355 LIDKLRDL-VEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSEL 413
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ R EQ + +E D+ ++ +D DFV ALEYGMP
Sbjct: 414 NDPVDQYQRFLEQAKMR------------------EEGDEEAH--MMDLDFVRALEYGMP 453
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+G+DRL M +T+S +IRDVI FPI+K
Sbjct: 454 PTGGLGIGLDRLFMFITDSPTIRDVIPFPIVK 485
>gi|421240280|ref|ZP_15696829.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2080913]
gi|395609838|gb|EJG69923.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2080913]
Length = 496
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ +P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINKPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|317500712|ref|ZP_07958930.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
gi|336438496|ref|ZP_08618129.1| hypothetical protein HMPREF0990_00523 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316897906|gb|EFV19959.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
gi|336019130|gb|EGN48862.1| hypothetical protein HMPREF0990_00523 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 642
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/524 (44%), Positives = 337/524 (64%), Gaps = 40/524 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
D +R +R +K+ EL+ G +P+ K+D+TH + +++E Y L E VS
Sbjct: 11 QDLNQLRKVRREKLAELQGSGKDPFVITKYDQTHHSVEVKENYEEL--------EGKQVS 62
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGR++++R GK +F ++D G IQ Y ++ + + + + K +D+GD++G+ G +
Sbjct: 63 IAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKK-LDVGDVIGIEGEVF 121
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
+T+ GE+S+ + +L+KSL LP+K+HGLT+ D RYRQRYVD+I PE D F KR+K
Sbjct: 122 KTKTGEISIHASHVTLLSKSLQILPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSK 181
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I+S IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L DL LRI+ EL+LKR+++
Sbjct: 182 IISAIRRYLDGEGFMEVETPMLVANAGGAAARPFETHFNALNEDLKLRISLELYLKRLIV 241
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 242 GGLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTT 301
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I Y GVE+ L +P+ R TM + VK+ G+D+NE +K +E R L D + +
Sbjct: 302 KIVYNGVEMDLGKPFERITMVDAVKKYAGVDWNE----VKTLEEA--RKLADEHHVEYEE 355
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+ G++L+ FE E L+QPTFV+D+PIEISPL K + TERFE F+ G
Sbjct: 356 HHKK----GDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNG 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
EMANA+SEL DP+DQR R + Q +E L + D+ + T D+D
Sbjct: 412 WEMANAYSELNDPIDQRERFKAQ------------------EELLAQGDEEAN--TTDED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
F+ ALE GMPP G+G GIDR+ MLLTNSA+IRDV+ FP +K Q
Sbjct: 452 FLNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFPTMKTQ 495
>gi|387626099|ref|YP_006062271.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV104]
gi|417693643|ref|ZP_12342832.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
gi|444381732|ref|ZP_21179938.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS8106]
gi|444385470|ref|ZP_21183543.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS8203]
gi|301793881|emb|CBW36276.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV104]
gi|332204726|gb|EGJ18791.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
gi|444250072|gb|ELU56556.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS8203]
gi|444253984|gb|ELU60431.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS8106]
Length = 496
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + T+ A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKTIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|385821207|ref|YP_005857594.1| lysyl-tRNA synthetase [Lactobacillus casei LC2W]
gi|385824400|ref|YP_005860742.1| lysyl-tRNA synthetase [Lactobacillus casei BD-II]
gi|417981706|ref|ZP_12622370.1| class II lysyl-tRNA synthetase [Lactobacillus casei 12A]
gi|417994150|ref|ZP_12634484.1| class II lysyl-tRNA synthetase [Lactobacillus casei CRF28]
gi|417997258|ref|ZP_12637518.1| class II lysyl-tRNA synthetase [Lactobacillus casei M36]
gi|418000166|ref|ZP_12640362.1| class II lysyl-tRNA synthetase [Lactobacillus casei T71499]
gi|418009034|ref|ZP_12648876.1| class II lysyl-tRNA synthetase [Lactobacillus casei UW4]
gi|418011901|ref|ZP_12651649.1| class II lysyl-tRNA synthetase [Lactobacillus casei Lc-10]
gi|418014179|ref|ZP_12653790.1| class II lysyl-tRNA synthetase [Lactobacillus casei Lpc-37]
gi|327383534|gb|AEA55010.1| Lysyl-tRNA synthetase [Lactobacillus casei LC2W]
gi|327386727|gb|AEA58201.1| Lysyl-tRNA synthetase [Lactobacillus casei BD-II]
gi|410521109|gb|EKP96074.1| class II lysyl-tRNA synthetase [Lactobacillus casei 12A]
gi|410530466|gb|EKQ05239.1| class II lysyl-tRNA synthetase [Lactobacillus casei CRF28]
gi|410533197|gb|EKQ07883.1| class II lysyl-tRNA synthetase [Lactobacillus casei M36]
gi|410537086|gb|EKQ11665.1| class II lysyl-tRNA synthetase [Lactobacillus casei T71499]
gi|410544785|gb|EKQ19100.1| class II lysyl-tRNA synthetase [Lactobacillus casei UW4]
gi|410551400|gb|EKQ25463.1| class II lysyl-tRNA synthetase [Lactobacillus casei Lc-10]
gi|410554356|gb|EKQ28333.1| class II lysyl-tRNA synthetase [Lactobacillus casei Lpc-37]
Length = 499
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 338/521 (64%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 19 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 311 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 357
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 358 YEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGG 417
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+
Sbjct: 418 EYANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDY 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 458 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|402301942|ref|ZP_10821064.1| lysine--tRNA ligase [Selenomonas sp. FOBRC9]
gi|400381327|gb|EJP34129.1| lysine--tRNA ligase [Selenomonas sp. FOBRC9]
Length = 503
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/530 (45%), Positives = 336/530 (63%), Gaps = 35/530 (6%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
RA ++ D + +R +K+E R+ G+ P+ ++++ T A +++ Y HL EE
Sbjct: 5 RAQTAEAQEQDLNEMMRVRREKMEAFRAMGVAPFGHRFEVTDYAAEIRAQYDHLDEDEEG 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
V +AGR++A R GK +F TL D +G IQ+Y +++ L ++ + +DIGDI
Sbjct: 65 GE----VCIAGRLMAIRGHGKASFSTLNDRTGNIQIYFKQDILGEQKYKEEFKRLDIGDI 120
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV
Sbjct: 121 IGIRGVVFKTRRGEVTVRVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNYEVR 180
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D FRKRAKI+ IR ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATE
Sbjct: 181 DTFRKRAKIIRSIRSYLDERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLYLRIATE 240
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L LKR+++GG +++YE+GRIFRNEG+ RHNPEFT+IE+Y+A+ DY+ +M ITE IV
Sbjct: 241 LSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTSIEIYQAFGDYRDLMEITEGIVRRT 300
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I YQGVEI L R +M++ V EATG DF L RA+
Sbjct: 301 AEDVLGTTKITYQGVEIDLG-TVRTVSMNDAVCEATGRDF------LSCTTVDEARAMAK 353
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
+ E +G +LN FE VE L+QPTF+ +P EISPLAK + +T+
Sbjct: 354 EI----GVPFEERHGIGGILNAAFEEKVEETLIQPTFITGHPTEISPLAKRNPDDPRITD 409
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ GRE+AN F+EL DP+DQ R +Q+ AQ + +++ H
Sbjct: 410 RFEFFVYGRELANGFTELNDPIDQEQRFIDQL----------------AQREAGDAEAH- 452
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+VTALEYG+PP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 453 ---VMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 499
>gi|421306899|ref|ZP_15757545.1| lysine--tRNA ligase [Streptococcus pneumoniae GA60132]
gi|395908862|gb|EJH19739.1| lysine--tRNA ligase [Streptococcus pneumoniae GA60132]
Length = 491
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 10 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 69 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 128 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 188 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 248 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ +P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 308 KINKPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 359 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 419 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 457
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 458 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 491
>gi|336392401|ref|ZP_08573800.1| lysyl-tRNA synthetase [Lactobacillus coryniformis subsp. torquens
KCTC 3535]
Length = 507
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 332/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR++G++P+ +++R ++ Q++E Y + E+ +E V++AGR++ +R
Sbjct: 17 VRREKMDELRTEGIDPFGQRFERDATSQQIRERYADESK-EQLEAEEHIVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F D G IQ+Y K+R+ + + K D+GDI+G++G + +T+ GEL+V
Sbjct: 76 GKGKVGFADFADRDGRIQVYVRKDRVGEENYHIFKR-SDLGDIMGITGDVMKTDTGELTV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
N LTK+L PLPDKYHGL +V+++YRQRY+D+I+ + D F KR+KIVS +R+ +
Sbjct: 135 RANHVTFLTKALRPLPDKYHGLQNVEQKYRQRYLDLIANRDSFDRFMKRSKIVSAVREYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ FVEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 195 DKNEFVEVETPVLHTQAGGASARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY D +M+ TE IV A VNG I YQG I
Sbjct: 255 GRVFRNEGIDTKHNPEFTMLETYAAYWDLSDVMDETEGIVRFAAQKVNGTGQITYQGQPI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L++P+ R M +L+KE TG+DF E T+ L ++ E VG
Sbjct: 315 DLDKPFARAHMVDLIKEKTGVDF---------WPEMTVEQ-AQKLADEHDVKYEKWWQVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +PIEISPLAK + +RFELFI G E ANAF+E
Sbjct: 365 HIINAFFEDFVEATLTQPTFVYGHPIEISPLAKKDPKDPRFVQRFELFIHGGEYANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+AR E Q + +E +D ++ +D+D+V ALEYGM
Sbjct: 425 LNDPIDQKARFEAQATER------------------EEGNDEAH--GIDEDYVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+ SIRDV FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTDVDSIRDVQLFPTMR 497
>gi|363892659|ref|ZP_09319820.1| lysine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361963245|gb|EHL16326.1| lysine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 642
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/519 (44%), Positives = 343/519 (66%), Gaps = 44/519 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
+ L+ +K+ +L+ G +P+ K+D+TH + ++++ + +G+E VSVAGR+
Sbjct: 11 IERLKYEKLLKLQENGKDPFKIEKFDQTHHSKEIKDNFEDF-DGKE-------VSVAGRM 62
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
++ R+FGK F+ ++D G IQ Y K++L + + + K F DIGDI+GV+G + +T+K
Sbjct: 63 MSFRSFGKATFIDIQDKDGRIQSYVRKDQLGEELYKEFKEF-DIGDIVGVTGIVFKTQKD 121
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+S+ +S +L+KSL LP+KYHGL D+D RYRQRYVD+I PEV + F R K + +
Sbjct: 122 EISIKASSIQLLSKSLRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKAL 181
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R +E F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGFEK
Sbjct: 182 RDFLEQREFIEVETPILNTIAGGAAARPFITHHNTLDIDMYLRIANELYLKRLIVGGFEK 241
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T +E+Y+AY+DY+ +M +TEE V + A A G I+YQ
Sbjct: 242 VYEMGRMFRNEGMDMKHNPEYTAMELYQAYADYEDIMKLTEEAVAYMAEAATGSTLIEYQ 301
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G +I L+ PWRR +M + +K+ IDF+ T++ + +E + +E
Sbjct: 302 GKQIDLKPPWRRLSMTDAIKQYANIDFD------------TIKTDEEAVELAKEHAVEII 349
Query: 421 PSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
P + G++++ +FE E KL++PTF+ +P+EISPL+K + +T RFE F+ E+
Sbjct: 350 PEMTRGHVISAIFEKYCEEKLIEPTFITHHPVEISPLSKRNPDDPRITNRFEAFVNTWEI 409
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQRAR Q+RQ +E D ++ LD+DF+
Sbjct: 410 ANAFSELNDPIDQRARFMAQLRQ-------------------RELGDEEAQM-LDEDFLN 449
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
A+E GMPP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 450 AIEVGMPPTGGLGIGIDRVIMLLTNSASIRDVILFPTMK 488
>gi|292670845|ref|ZP_06604271.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
gi|292647466|gb|EFF65438.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
Length = 503
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/526 (45%), Positives = 337/526 (64%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S D + +R +K++ RS G+ P+ ++++ T A L+E Y LA EE
Sbjct: 9 SCPPEQDLNEMMRVRREKMDAFRSIGVAPFGHRFEVTDYAADLKEKYDSLAEDEEGK--- 65
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V +AGR++A R GK +F TL D +G IQ+Y + + L ++ + +DIGDI+G+
Sbjct: 66 -EVYIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDIGDIIGIR 124
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +T +GE++V V F +L+K+L PLP+K+HGL DVD RYRQRY+D++ EV D FR
Sbjct: 125 GVVFKTRRGEITVRVEDFNLLSKALRPLPEKFHGLKDVDTRYRQRYIDLMVNYEVRDTFR 184
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
KR +I+ IR+ ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL+LK
Sbjct: 185 KRTRIIQSIRRYLDERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLYLRIATELNLK 244
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG +++YE+GRIFRNEG+ RHNPEFTTIE+Y+A++DY+ +M ITE IV H A +V
Sbjct: 245 RLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTTIEIYQAFADYRDLMEITEGIVRHAAKSV 304
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQGV I L+ R +M++ V++ATG DF L RA+G E
Sbjct: 305 LGTTQIAYQGVNIDLDN-VRTISMNDSVRQATGKDF--LSCQTVDEARAMARAIGVPFEE 361
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ +G +LN FE VE L+QPTF+ +P EISPLAK + +T+RFE
Sbjct: 362 R--------YGIGGILNAAFEEKVEETLMQPTFITGHPTEISPLAKRNPDDPRITDRFEF 413
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
F+ GRE+AN F+EL DP+DQ R EQ+ E+R A +E
Sbjct: 414 FVYGRELANGFTELNDPIDQEQRFLEQL----EQRQAGDAEAH----------------V 453
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D++TALEYG+PP G+G+G+DRLVMLLT+S SIRDV+ FP +K
Sbjct: 454 MDRDYITALEYGLPPTGGLGIGVDRLVMLLTDSPSIRDVLLFPTMK 499
>gi|449926469|ref|ZP_21800769.1| lysyl-tRNA synthetase [Streptococcus mutans 4SM1]
gi|449160621|gb|EMB63873.1| lysyl-tRNA synthetase [Streptococcus mutans 4SM1]
Length = 496
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/526 (44%), Positives = 336/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALAEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N +E VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFYEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|354807943|ref|ZP_09041392.1| lysyl-tRNA synthetase [Lactobacillus curvatus CRL 705]
gi|354513564|gb|EHE85562.1| lysyl-tRNA synthetase [Lactobacillus curvatus CRL 705]
Length = 503
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ L+ +G++P+ ++DRTH A +L + + ++ +++N V++AGR++++R
Sbjct: 16 VRREKLQLLKDEGIDPFGSRFDRTHMAAELHSEFEAIEK-DDLDAKNLEVTIAGRMMSKR 74
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F +RD SG IQ+Y K+ + + + K D+GD LG++G + +T+ GEL+V
Sbjct: 75 GKGKVGFADIRDRSGKIQIYVRKDEVGEENYLIFKK-ADLGDHLGITGQIMKTDMGELTV 133
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLPDK+HGLT+V++ YRQRY+D+I+ PE D F KR+KI+S +R+ +
Sbjct: 134 KATHLTFLSKALRPLPDKFHGLTNVEQIYRQRYLDLIANPESLDRFTKRSKIISAVREYL 193
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF EVETPVL G AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 194 DNNGFTEVETPVLHGQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVYEI 253
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY DY+ +M+ TE I+ A V G I YQG I
Sbjct: 254 GRVFRNEGIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAI 313
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ + R M + +KE TG+DF + ++ A+E L ++ E+ VG
Sbjct: 314 DLDGDFARVHMVDAIKEKTGVDFWQPMT-VEAARE---------LADQHHVKYEAYWQVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTF+ +P+EISPLAK + T+R+ELF+ G E ANAF+E
Sbjct: 364 HIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E AQ K +E+ + E +D+D++ ALEYGM
Sbjct: 424 LNDPIDQRERFE-------------------AQAKERENGNDEAE-GIDEDYIEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ASIRDV+ FP ++
Sbjct: 464 PPTGGLGIGIDRLVMLLTDAASIRDVLLFPTMR 496
>gi|227533061|ref|ZP_03963110.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|409998303|ref|YP_006752704.1| lysine--tRNA ligase [Lactobacillus casei W56]
gi|227189312|gb|EEI69379.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|406359315|emb|CCK23585.1| Lysine--tRNA ligase [Lactobacillus casei W56]
Length = 508
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 338/521 (64%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 28 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 82
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 83 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 141
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 142 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 201
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 202 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 261
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 262 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 319
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 320 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 366
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 367 YEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGG 426
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+
Sbjct: 427 EYANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDY 466
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 467 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 507
>gi|347547699|ref|YP_004854027.1| putative lysyl-tRNA synthetase [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980770|emb|CBW84677.1| Putative lysyl-tRNA synthetase [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 498
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/516 (44%), Positives = 334/516 (64%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KVE LR +G++P+ K+ R+ S +++ + + EE + V+VAGR++ +R
Sbjct: 15 VRREKVETLREEGIDPFGGKFIRSISPEEIETKFADKSK-EELEEASIEVTVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKI-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATKFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y +
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYKDVMDLVEGLVSTVCEQVNGTTKITYGEYHV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSP 421
L WRR M + VKE G+DF + +D ++AKE ++ +
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSDEEAHRLAKEHNVQ-------------VTKHM 359
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANA
Sbjct: 360 TYGHILNEFFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDDRFTDRFELFIVGREHANA 419
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E Q+++ ++ +D ++ +D DF+ ALE
Sbjct: 420 FSELNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALE 459
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 460 YGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|450104847|ref|ZP_21859480.1| lysyl-tRNA synthetase [Streptococcus mutans SF14]
gi|449225318|gb|EMC24925.1| lysyl-tRNA synthetase [Streptococcus mutans SF14]
Length = 496
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 334/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR + LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRHYLNGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|306490904|gb|ADM95022.1| lysyl-tRNA synthetase [uncultured candidate division JS1 bacterium]
Length = 496
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/516 (46%), Positives = 335/516 (64%), Gaps = 35/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA RIK++EELR KG++P+ ++ ++ E + +A+ EE +SE V +AGR+
Sbjct: 13 LRAERIKEIEELRMKGIDPFGRRFVGKQPIKEVIEKFDEIAS-EEPSSEK--VVIAGRIK 69
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
A R GK F L D +G +Q+Y + + D F+ K + +GDI+G++G + T GE
Sbjct: 70 ALRKHGKAIFADLEDQTGKLQIYVKANFIGVDSFEIFKK-ISVGDIIGITGLVFETRTGE 128
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+VL F +L K++ LP+K+HGLTD + RYR+RY+D+IS PE ++F +R+KI+ IR
Sbjct: 129 LTVLATLFTLLCKTIRTLPEKWHGLTDTEIRYRKRYLDLISNPETRELFIERSKIIRYIR 188
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+++ G++EVETPVLQ GGA A PFVT+H SL RDLYL+IA EL+LKR+L+GG EK+
Sbjct: 189 DFLDNKGYLEVETPVLQPIPGGATATPFVTHHFSLHRDLYLKIAPELYLKRLLVGGMEKV 248
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+ R FRNEG+ST+HNPEFT +E+YEAY+DYQ MM I EE++ + G L I YQG
Sbjct: 249 YELNRNFRNEGISTKHNPEFTMLELYEAYADYQVMMEIAEEMICDILKKLRGNLIIQYQG 308
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+I PW++ TM+ +K TGI+ E+ KE L D L N+ + +
Sbjct: 309 EKIDFTSPWKKLTMYEAIKLVTGINPEEV-------KEEDL----DSLINQYQLEVPKKA 357
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G ++NE+FE VE LVQPTF+ DYPIE+SPL+K + L ERFELFI G E+ANA
Sbjct: 358 TKGEVINELFEKQVEQTLVQPTFITDYPIEVSPLSKQKPDNPHLVERFELFINGMEIANA 417
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP++Q+ R Q + +E + ++ +D D++ ALE
Sbjct: 418 FTELNDPIEQKRRFLLQAKNKSEGEI-----------------NQNF---IDYDYIEALE 457
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPPA GMG+GIDRLVMLLTN SIR+VI FP LK
Sbjct: 458 YGMPPAGGMGVGIDRLVMLLTNRDSIREVILFPQLK 493
>gi|363890921|ref|ZP_09318215.1| hypothetical protein HMPREF9628_00720 [Eubacteriaceae bacterium
CM5]
gi|361962688|gb|EHL15797.1| hypothetical protein HMPREF9628_00720 [Eubacteriaceae bacterium
CM5]
Length = 642
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/519 (44%), Positives = 343/519 (66%), Gaps = 44/519 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
+ L+ +K+ +L+ G +P+ K+D+TH + ++++ + +G+E VSVAGR+
Sbjct: 11 IERLKYEKLLKLQENGKDPFKIEKFDQTHHSKEIKDNFEDF-DGKE-------VSVAGRM 62
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
++ R+FGK F+ ++D G IQ Y K++L + + + K F DIGDI+GV+G + +T+K
Sbjct: 63 MSFRSFGKATFIDIQDKDGRIQSYVRKDQLGEELYKEFKEF-DIGDIVGVTGIVFKTQKD 121
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+S+ +S +L+KSL LP+KYHGL D+D RYRQRYVD+I PEV + F R K + +
Sbjct: 122 EISIKASSIQLLSKSLRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKAL 181
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R +E F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGFEK
Sbjct: 182 RDFLEQREFIEVETPILNTIAGGAAARPFITHHNTLDIDMYLRIANELYLKRLIVGGFEK 241
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T +E+Y+AY+DY+ +M +TEE V + A A G I+YQ
Sbjct: 242 VYEMGRMFRNEGMDMKHNPEYTAMELYQAYADYEDIMKLTEEAVAYMAEAATGSTLIEYQ 301
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G +I L+ PWRR +M + +K+ IDF+ T++ + +E + +E
Sbjct: 302 GKQIDLKPPWRRLSMTDAIKQYANIDFD------------TIKTDEEAVELAKEHAVEII 349
Query: 421 PSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
P + G++++ +FE E KL++PTF+ +P+EISPL+K + +T RFE F+ E+
Sbjct: 350 PEMTRGHVISAIFEKYCEEKLIEPTFITHHPVEISPLSKRNPDDPRITNRFEAFVNTWEI 409
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQRAR Q+RQ +E D ++ LD+DF+
Sbjct: 410 ANAFSELNDPIDQRARFMAQLRQ-------------------RELGDEEAQM-LDEDFLN 449
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
A+E GMPP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 450 AIEVGMPPTGGLGIGIDRVIMLLTNSASIRDVILFPTMK 488
>gi|191639442|ref|YP_001988608.1| lysyl-tRNA synthetase [Lactobacillus casei BL23]
gi|239630366|ref|ZP_04673397.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|190713744|emb|CAQ67750.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
gi|239526649|gb|EEQ65650.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 498
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 338/521 (64%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 18 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 72
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 73 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 131
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 132 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 191
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 192 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 251
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 252 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 309
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 310 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 356
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 357 YEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGG 416
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+
Sbjct: 417 EYANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDY 456
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 457 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 497
>gi|402838143|ref|ZP_10886655.1| lysine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273647|gb|EJU22842.1| lysine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 642
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/519 (44%), Positives = 343/519 (66%), Gaps = 44/519 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
+ L+ +K+ +L+ G +P+ K+D+TH + ++++ + +G+E VSVAGR+
Sbjct: 11 IERLKYEKLLKLQENGKDPFKIEKFDQTHHSKEIKDNFEDF-DGKE-------VSVAGRM 62
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
++ R+FGK F+ ++D G IQ Y K++L + + + K F DIGDI+GV+G + +T+K
Sbjct: 63 MSFRSFGKATFIDIQDKDGRIQSYVRKDQLGEELYKEFKEF-DIGDIVGVTGIVFKTQKD 121
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+S+ +S +L+KSL LP+KYHGL D+D RYRQRYVD+I PEV + F R K + +
Sbjct: 122 EISIKASSIQLLSKSLRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKAL 181
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R +E F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGFEK
Sbjct: 182 RDFLEQREFIEVETPILNTIAGGAAARPFITHHNTLDIDMYLRIANELYLKRLIVGGFEK 241
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ +HNPE+T +E+Y+AY+DY+ +M +TEE V + A A G I+YQ
Sbjct: 242 VYEMGRMFRNEGMDMKHNPEYTAMELYQAYADYEDIMKLTEEAVAYMAEAATGSTLIEYQ 301
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G +I L+ PWRR +M + +K+ IDF+ T++ + +E + +E
Sbjct: 302 GKQIDLKPPWRRLSMTDAIKQYANIDFD------------TIKTDEEAVELAKEHAVEII 349
Query: 421 PSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
P + G++++ +FE E KL++PTF+ +P+EISPL+K + +T RFE F+ E+
Sbjct: 350 PEMTRGHVISAIFEKYCEEKLIEPTFITHHPVEISPLSKRNPDDPRITNRFEAFVNTWEI 409
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQRAR Q+RQ +E D ++ LD+DF+
Sbjct: 410 ANAFSELNDPIDQRARFMAQLRQ-------------------RELGDEEAQM-LDEDFLN 449
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
A+E GMPP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 450 AIEVGMPPTGGLGIGIDRVIMLLTNSASIRDVILFPTMK 488
>gi|320528945|ref|ZP_08030037.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
gi|320138575|gb|EFW30465.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
Length = 503
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/530 (45%), Positives = 336/530 (63%), Gaps = 35/530 (6%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
RA ++ D + +R +K+E R+ G+ P+ ++++ T A +++ Y HL EE
Sbjct: 5 RAQTAEAQEQDLNEMMRVRREKMEAFRAMGVAPFGHRFEVTDYAAEIRAQYDHLDEDEEG 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
V +AGR++A R GK +F TL D +G IQ+Y +++ L ++ + +DIGDI
Sbjct: 65 G----EVCIAGRLMAIRGHGKASFSTLNDRTGNIQIYFKQDVLGEKKYKEEFKRLDIGDI 120
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV
Sbjct: 121 IGIRGVVFKTRRGEVTVRVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNYEVR 180
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D FRKRAKI+ IR ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATE
Sbjct: 181 DTFRKRAKIIRSIRSYLDERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLYLRIATE 240
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L LKR+++GG +++YE+GRIFRNEG+ RHNPEFT+IE+Y+A+ DY+ +M ITE IV
Sbjct: 241 LSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTSIEIYQAFGDYRDLMEITEGIVRRT 300
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I YQGVEI L R +M++ V EATG DF L RA+
Sbjct: 301 AEDVLGTTKITYQGVEIDLG-TVRTVSMNDAVCEATGRDF------LSCTTVDEARAMAK 353
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
+ E +G +LN FE VE L+QPTF+ +P EISPLAK + +T+
Sbjct: 354 EI----GVPFEERHGIGGILNAAFEEKVEETLIQPTFITGHPTEISPLAKRNPDDPRITD 409
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ GRE+AN F+EL DP+DQ R +Q+ AQ + +++ H
Sbjct: 410 RFEFFVYGRELANGFTELNDPIDQEQRFIDQL----------------AQREAGDAEAH- 452
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+VTALEYG+PP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 453 ---VMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 499
>gi|418086454|ref|ZP_12723625.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47033]
gi|418201993|ref|ZP_12838423.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA52306]
gi|419455121|ref|ZP_13995081.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP04]
gi|421285448|ref|ZP_15736225.1| lysine--tRNA ligase [Streptococcus pneumoniae GA60190]
gi|353759717|gb|EHD40300.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47033]
gi|353867796|gb|EHE47686.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA52306]
gi|379629578|gb|EHZ94172.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP04]
gi|395887427|gb|EJG98442.1| lysine--tRNA ligase [Streptococcus pneumoniae GA60190]
Length = 496
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ +P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINKPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKRVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|312880305|ref|ZP_07740105.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783596|gb|EFQ23994.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 503
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 337/514 (65%), Gaps = 35/514 (6%)
Query: 66 RIKKVEELRSK-GLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
R K+ LR++ G +PY ++DR H+ ++ + L +E E + AGRV+
Sbjct: 20 RKDKLARLRTEEGYDPYLVDRFDRKHTLGYVRSAFEGL-QADEGGEET--IVTAGRVMTL 76
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK AF TL D+ +Q+Y + + L + K +VD GD+LGV+G RT++GELS
Sbjct: 77 RRHGKAAFATLEDEHHRLQMYFQFDELGEKAYTFFKKWVDTGDLLGVAGRPFRTQRGELS 136
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V+ F +L+K+L PLP+K+HGL D + RYRQRYVD+I+ PEV D FRKR +I+ R+
Sbjct: 137 LKVSQFTLLSKALRPLPEKWHGLKDQEVRYRQRYVDLIANPEVRDTFRKRTRIIQTFRRV 196
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E+ +EV TP+L AGGA ARPFVT+HN+LG +YLRIATEL+LKR+++G F ++YE
Sbjct: 197 LEAHDTLEVGTPILSPLAGGANARPFVTFHNALGIPMYLRIATELYLKRLIVGMFGRVYE 256
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IG FRNEG+ +HNPEFT +E+Y +Y++Y+ MM++ EEI+ CA V G T+ YQG E
Sbjct: 257 IGPNFRNEGIDLKHNPEFTAMEVYWSYANYEDMMDLCEEILVACADEV-GSRTVTYQGTE 315
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I E P+RR +M +LVKE TGIDF+ L + + A++ L+ NK ++ +
Sbjct: 316 ISFEPPFRRASMMDLVKEHTGIDFDALSD--QEARDLALK-------NKVVSELKGYETK 366
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
+LL E F+ VE KL+QPTFV+ +P ISPL+K + + +T+RFELFI G E+ANAFS
Sbjct: 367 YHLLPEFFDAYVEDKLIQPTFVMGHPTVISPLSKRNAANPDITDRFELFINGSEVANAFS 426
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DPLDQR R +QV+Q KE+ D V D+DFV ALEYG
Sbjct: 427 ELNDPLDQRERFLDQVKQ-------------------KEAGDEEAHV-FDEDFVNALEYG 466
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP GMG+GIDRLVMLLT+S SIRDVI FP ++
Sbjct: 467 LPPTGGMGIGIDRLVMLLTDSRSIRDVILFPTMR 500
>gi|225016227|ref|ZP_03705419.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
DSM 5476]
gi|224950985|gb|EEG32194.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
DSM 5476]
Length = 502
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 341/514 (66%), Gaps = 40/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K++EL+ G P+ K++ T AN++ E + + E VS+AGR++++
Sbjct: 22 IRRDKLDELKQNGNNPFEITKYEVTAYANEIIEHFDEM--------EGKVVSLAGRMMSK 73
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F+ LRD++G +Q Y + + + + K + DIGDI+G+ G + RT KGE+S
Sbjct: 74 RGMGKASFVDLRDNTGRLQSYVRIDAVGEETYQSFKKW-DIGDIIGIEGEVFRTHKGEIS 132
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ + +L+KSLLPLP+K+HGL D D RYRQRYVD+I P+V D F KR++I++EIR+
Sbjct: 133 IKASKITLLSKSLLPLPEKWHGLRDTDTRYRQRYVDLIVNPDVKDTFVKRSRIITEIRRF 192
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ GF+EVETPVL AGGA ARPF+T+HN+L D+Y+RIA ELHLKR+++GGF+++YE
Sbjct: 193 LDGEGFLEVETPVLHNIAGGASARPFITHHNALNIDMYMRIALELHLKRLIVGGFDRVYE 252
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG T+HNPEFT +E+Y+AY+DY+ MM+ITE ++ A V G T+ Y E
Sbjct: 253 IGRVFRNEGTDTKHNPEFTLLELYQAYTDYEGMMDITERMIKTVAQNVLGTTTVQYGEHE 312
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L +P+ R TM + VK+ +G+DF+++ ET A E+ +F E
Sbjct: 313 IDLGKPFTRITMTDAVKQYSGVDFSQI--------ETLEEARAIAKEHHIEF--EDRHLK 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LN F+ VE KL+QPTF+ DYP+EISPLAK +TERFELFI GRE ANAFS
Sbjct: 363 GDILNLFFDEYVEDKLIQPTFITDYPVEISPLAKRKPSDPTMTERFELFILGREHANAFS 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E QV E K DD + + +D D++TALEYG
Sbjct: 423 ELNDPIDQKGRFEHQV------------------ELKKAGDDEAAD--MDTDYITALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTN+ IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTNNDCIRDVLLFPTMK 496
>gi|289433583|ref|YP_003463455.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169827|emb|CBH26365.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 498
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 332/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KVE LR +G++P+ K+ R+ S +++ + + EE + V+VAGR++ +R
Sbjct: 15 VRREKVETLREEGVDPFGGKFIRSISPEEIETKFADKSK-EELEEASIEVTVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKI-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCEQVNGTTKITYGEYDV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + + L + + + G
Sbjct: 313 DLTPKWRRIHMADAVKEYVGVDFWNVTSDEEAHQ----------LAKEHNVPVTKHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|149010667|ref|ZP_01832038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|303255869|ref|ZP_07341910.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|303259976|ref|ZP_07345950.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|303261382|ref|ZP_07347330.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|303264049|ref|ZP_07349970.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
gi|303266941|ref|ZP_07352817.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|303269235|ref|ZP_07355011.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|418139029|ref|ZP_12775860.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13338]
gi|418180068|ref|ZP_12816641.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41688]
gi|418188940|ref|ZP_12825455.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47373]
gi|418199780|ref|ZP_12836227.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47976]
gi|419468586|ref|ZP_14008457.1| lysine--tRNA ligase [Streptococcus pneumoniae GA06083]
gi|419522949|ref|ZP_14062531.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13723]
gi|421297320|ref|ZP_15748023.1| lysine--tRNA ligase [Streptococcus pneumoniae GA58581]
gi|147765148|gb|EDK72077.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|302597253|gb|EFL64358.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|302637516|gb|EFL68003.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|302638895|gb|EFL69356.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|302641242|gb|EFL71613.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|302643515|gb|EFL73786.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|302646454|gb|EFL76680.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
gi|353846396|gb|EHE26429.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41688]
gi|353856082|gb|EHE36051.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47373]
gi|353866458|gb|EHE46360.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47976]
gi|353905866|gb|EHE81282.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13338]
gi|379546689|gb|EHZ11827.1| lysine--tRNA ligase [Streptococcus pneumoniae GA06083]
gi|379559427|gb|EHZ24456.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13723]
gi|395892894|gb|EJH03884.1| lysine--tRNA ligase [Streptococcus pneumoniae GA58581]
Length = 496
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 340/514 (66%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ +P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINKPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|357238131|ref|ZP_09125468.1| lysine--tRNA ligase [Streptococcus ictaluri 707-05]
gi|356752854|gb|EHI69975.1| lysine--tRNA ligase [Streptococcus ictaluri 707-05]
Length = 496
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/517 (45%), Positives = 336/517 (64%), Gaps = 39/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ +L+E Y EE + + VAGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFERTANSAELKEKYAD-KTKEELHELKETAIVAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + + +D K D+GD +GV G + RT+ GELS+
Sbjct: 74 GKGKAGFAHLQDRQGQIQVYVRKDSVGDENYDIFKK-ADLGDFIGVEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS E D F R+K++SEIR+ +
Sbjct: 133 KATKVTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ + F+EVETPVL AGGA ARPF+T+HN+ ++ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGMDFLEVETPVLHNEAGGAAARPFITHHNAQNIEMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DYQ +MN+TE I+ H A AV G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMNLTEGIIQHAAKAVKGDGPIDYQGNEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDF---NELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+ +P++R M + +KE TGIDF L + + +AKE + LE +
Sbjct: 313 LINQPFKRVHMVDAIKEVTGIDFWPEMSLEDAIALAKEKHVP-----LE-------KHFT 360
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANA
Sbjct: 361 SVGHIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANA 420
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
F+EL DP+DQ +R E AQ + KE DD + +D +FV AL
Sbjct: 421 FTELNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYEFVEAL 459
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|328956582|ref|YP_004373968.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
gi|328672906|gb|AEB28952.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
Length = 499
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/515 (44%), Positives = 331/515 (64%), Gaps = 32/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ LR + ++P+ +++RTH +N+L E Y EE + + +VAGR++ +R
Sbjct: 17 VRREKLDTLRERNVDPFGGRFERTHLSNELHEAYDEFTK-EEIAGKEETATVAGRIMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD +GV+G++ +T+ GE+++
Sbjct: 76 GKGKVGFAHLQDRKGQIQIYVRKDTVGEEDYETFKN-ADLGDFIGVTGTIMKTDTGEVTI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+ E+R +
Sbjct: 135 KPTSITQLSKALRPLPDKYHGLTNVEQRYRQRYLDLISNRESFDRFTKRSQIIREVRNYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++EVETP L AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG EK+YEI
Sbjct: 195 NEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELYLRIALELHLKRLIVGGMEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D++ +M++ E ++ A V G I Y G I
Sbjct: 255 GRVFRNEGVDTTHNPEFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGQITYNGQAI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W+R+ M + +KE +G+DF + RAL + D V E S G
Sbjct: 315 DLESSWKRQHMVDAIKEHSGVDF------WQHMTNEEARALA---KEHDVPVTEHS-QFG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFE FI G E NAFSE
Sbjct: 365 HVVNEFFEKFVEDKLIQPTFIYGHPLEISPLAKKNTEDPRFTDRFEAFIVGHEYGNAFSE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ RA E +D+DF+ +LEYGM
Sbjct: 425 LNDPIDQRERFESQMKE----RALGNDEAH----------------MIDEDFIESLEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++ Q
Sbjct: 465 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMRNQ 499
>gi|418324805|ref|ZP_12936031.1| lysine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
gi|365224128|gb|EHM65395.1| lysine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
Length = 428
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/457 (50%), Positives = 307/457 (67%), Gaps = 31/457 (6%)
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+ +R GK F ++D +G IQLY K+++ DQF K D+GDI+G+ G M +T G
Sbjct: 1 MTKRGKGKAGFAHIQDLTGQIQLYVRKDQIGEDQFAIWKS-ADLGDIVGIEGVMFKTNTG 59
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
ELSV F +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+
Sbjct: 60 ELSVKAKDFTLLTKALRPLPDKHHGLQDIEQRYRQRYLDLITNQDSTQTFINRSKILQEM 119
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK
Sbjct: 120 RNFLNKKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEK 179
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YEIGR+FRNEG+STRHNPEFT IE+YEAY+D+ MM+ITE +V H A V G+ TI Y
Sbjct: 180 VYEIGRVFRNEGVSTRHNPEFTMIELYEAYADFHDMMDITESMVRHIAQEVLGETTIPYG 239
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
++ L W+R M + VKEATG++F D+K +E A G+E D
Sbjct: 240 EEQVDLGSSWKRVHMVDAVKEATGVNF----YDVKSDEEARDLAKEHGVEITDHM----- 290
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G+++NE FE VE L+QPTFV +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 291 -KYGHIVNEFFEQKVEESLIQPTFVYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHAN 349
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQRAR E Q+++ +E +D ++E +D+DF+ AL
Sbjct: 350 AFTELNDPIDQRARFEAQLQER------------------EEGNDEAHE--MDEDFLEAL 389
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLTNS SIRDV+ FP ++
Sbjct: 390 EYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMR 426
>gi|331086545|ref|ZP_08335623.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410378|gb|EGG89810.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 649
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/530 (44%), Positives = 336/530 (63%), Gaps = 40/530 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEES 107
A D +R +R +K+ +L++ G +P+ K+D TH + +++ + +
Sbjct: 2 AEQKKVQEQDVNQLRQVRREKLADLQASGNDPFVITKYDVTHHSMDIKDHFEEM------ 55
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
E V++AGR++++R GK +F ++D G IQ Y ++ + + + K +DIGDI
Sbjct: 56 --EGKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKAFKK-MDIGDI 112
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + RT+ GE+S+ +L+KSL LP+K+HGLT+ D RYRQRYVD+I P+V
Sbjct: 113 VGIKGDVFRTKMGEISIHAQEVTLLSKSLQILPEKFHGLTNTDLRYRQRYVDLIMNPDVK 172
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F KR+KI+S IRK ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ E
Sbjct: 173 DTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAAARPFETHFNALNEDFKLRISLE 232
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L+LKR+++GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE +
Sbjct: 233 LYLKRLIVGGMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRFV 292
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I Y GVE+ L +P+ R TM + VK+ TGID+NE+ LK A+E
Sbjct: 293 AQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKYTGIDWNEV-TTLKEARE-------- 343
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
L + K E G++L+ FE VE L+QPTFV+D+PIEISPL K + TE
Sbjct: 344 -LAKEHKVEFEERHKKGDILSLFFEAFVEEHLIQPTFVMDHPIEISPLTKKKPENPEYTE 402
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ G EMANA+SEL DP+DQRAR + Q +E L + D+ +
Sbjct: 403 RFEFFMNGWEMANAYSELNDPIDQRARFKAQ------------------EELLAQGDEEA 444
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
T D+DF+ ALE GMPP G+G GIDR+ MLLT+SA+IRDV+ FP +K
Sbjct: 445 N--TTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMK 492
>gi|421770647|ref|ZP_16207338.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus LRHMDP2]
gi|421772819|ref|ZP_16209472.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus LRHMDP3]
gi|411181753|gb|EKS48916.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus LRHMDP2]
gi|411183233|gb|EKS50373.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus LRHMDP3]
Length = 499
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/519 (46%), Positives = 339/519 (65%), Gaps = 46/519 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS----ENDHVSVAGRVV 121
R +K++ LR G++P+ +++DRTHSA +++E + GE+ E V++AGR++
Sbjct: 19 RREKMDALREAGIDPFGHRFDRTHSAAKVREEF-----GEDDKETLLEEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + + + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDENYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS P+ D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V +GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG++I L+ P+ R M + +K+ TG+ F E+ D R L D E E
Sbjct: 311 QGMDIDLDAPFARINMLDAIKDKTGVGFWPEMSVD-------EARKLADDHEVH----YE 359
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G E
Sbjct: 360 PYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEY 419
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAF+EL DP+DQR R E Q +EK++ E+ + +DDD+V
Sbjct: 420 ANAFTELNDPIDQRQRFEAQ-----------AAEKTAGNEEAQ---------GIDDDYVE 459
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|16802274|ref|NP_463759.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|284803032|ref|YP_003414897.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284996173|ref|YP_003417941.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|386049157|ref|YP_005967148.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|386052505|ref|YP_005970063.1| lysyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
gi|404282660|ref|YP_006683557.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|405757216|ref|YP_006686492.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
gi|38258394|sp|Q8YAB8.1|SYK_LISMO RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|16409593|emb|CAD00755.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|284058594|gb|ADB69535.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284061640|gb|ADB72579.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|346423003|gb|AEO24528.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|346645156|gb|AEO37781.1| lysyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
gi|404232162|emb|CBY53565.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|404235098|emb|CBY56500.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
Length = 498
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 333/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + A+E L K + + G
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHDVPVTEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|417987782|ref|ZP_12628335.1| class II lysyl-tRNA synthetase [Lactobacillus casei 32G]
gi|410522174|gb|EKP97123.1| class II lysyl-tRNA synthetase [Lactobacillus casei 32G]
Length = 499
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 338/521 (64%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 19 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 311 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 357
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 358 YEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGG 417
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF+EL DP+DQR R E Q +EKS+ ++ + +DDD+
Sbjct: 418 EYANAFTELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDY 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 458 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|270307940|ref|YP_003329998.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
gi|270153832|gb|ACZ61670.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
Length = 498
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/518 (43%), Positives = 327/518 (63%), Gaps = 32/518 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E + A + +K+E ++S+G+ PY + +H++ Q + L E N + + +AGR
Sbjct: 4 EYLNAQKTEKLERIKSRGINPYPATFHPSHTSAQAVALLAELETQE--NPPKETLRIAGR 61
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ RR GK++F+ +RD SG IQ++C + + + LK +D+GD +G GS+ RT
Sbjct: 62 IMTRRDMGKISFMDIRDGSGKIQIFCRQNDMDEASIELLKD-LDLGDFIGAEGSLMRTRT 120
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE S+ +L+KSLLPLP+K+HGL DV+KRYRQRY+D+IS + F R++++S
Sbjct: 121 GEPSLAATRITMLSKSLLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISA 180
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR + + F+EVETPVLQ AGGA ARPF+T+H +L D Y+RIA ELHLKR+++GGF+
Sbjct: 181 IRCFMSAKEFLEVETPVLQPEAGGALARPFITHHQALDCDFYMRIALELHLKRLIVGGFD 240
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YEIGRIFRNEG+STRHNPEFT +E Y+AY+DY+ +M+ EE+V+ ++G T+ +
Sbjct: 241 RVYEIGRIFRNEGVSTRHNPEFTMMESYQAYADYKDVMDFLEEMVSSVVKEISGGYTVPF 300
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
+ + PW R T+ + VK+ GIDF + +A E T R K ++
Sbjct: 301 GDITLDFTPPWPRLTIRDAVKQYAGIDFFDFPTKEALAAEMTRR----------KLKVDP 350
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G L++E+ VEP L+QPTF+ D+P+ +SPLAK LTERFE E+A
Sbjct: 351 AKDWGKLVDELVGEFVEPHLIQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIA 410
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP++QRAR +EQ+ + N+ R ++D+DF+ A
Sbjct: 411 NAFSELNDPVEQRARFKEQLEKRNQLRTEEFE-------------------SIDEDFLAA 451
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
L YGMPP G+G+GIDRLVMLLTN SIR+VI FP LK
Sbjct: 452 LAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALK 489
>gi|420146309|ref|ZP_14653735.1| Lysine--tRNA ligase (Lysyl-tRNA synthetase) [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398401971|gb|EJN55376.1| Lysine--tRNA ligase (Lysyl-tRNA synthetase) [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 497
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 332/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR++G++P+ +++R ++ Q++E Y + E+ +E V++AGR++ +R
Sbjct: 7 VRREKMDELRTEGIDPFGQRFERDATSQQIRERYADESK-EQLEAEEHIVTIAGRMMTKR 65
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F D G IQ+Y K+R+ + + K D+GDI+G++G + +T+ GEL+V
Sbjct: 66 GKGKVGFADFADRDGRIQVYVRKDRVGEENYHIFKR-SDLGDIMGITGDVMKTDTGELTV 124
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
N LTK+L PLPDKYHGL +V+++YRQRY+D+I+ + D F KR+KIVS +R+ +
Sbjct: 125 RANHVTFLTKALRPLPDKYHGLQNVEQKYRQRYLDLIANRDSFDRFMKRSKIVSAVREYL 184
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ FVEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 185 DKNEFVEVETPVLHTQAGGASARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 244
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY D +M+ TE IV A VNG I YQG I
Sbjct: 245 GRVFRNEGIDTKHNPEFTMLETYAAYWDLSDVMDETEGIVRFAAQKVNGTGQITYQGQPI 304
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L++P+ R M +L+KE TG+DF E T+ L ++ E VG
Sbjct: 305 DLDKPFARAHMVDLIKEKTGVDF---------WPEMTVEQ-AQKLADEHDVKYEKWWQVG 354
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +PIEISPLAK + +RFELFI G E ANAF+E
Sbjct: 355 HIINAFFEDFVEATLTQPTFVYGHPIEISPLAKKDPKDPRFVQRFELFIHGGEYANAFTE 414
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+AR E Q + +E +D ++ +D+D+V ALEYGM
Sbjct: 415 LNDPIDQKARFEAQATER------------------EEGNDEAH--GIDEDYVEALEYGM 454
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+ SIRDV FP ++
Sbjct: 455 PPTGGLGIGIDRLVMLLTDVDSIRDVQLFPTMR 487
>gi|387879934|ref|YP_006310237.1| lysyl-tRNA synthetase [Streptococcus parasanguinis FW213]
gi|419799807|ref|ZP_14325128.1| lysine--tRNA ligase [Streptococcus parasanguinis F0449]
gi|385697069|gb|EIG27524.1| lysine--tRNA ligase [Streptococcus parasanguinis F0449]
gi|386793384|gb|AFJ26419.1| Lysyl-tRNA synthetase [Streptococcus parasanguinis FW213]
Length = 496
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 334/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ QL+E Y L + E+ + N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSGQLKEKYSEL-DKEQLHDLNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +M++TE I+ H A AV+G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + D+ + L N+ +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAV-------ALANEKHVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GQIINAFFEEFVEETLTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ R E Q R A+E DD + +D D+V ALEYG
Sbjct: 423 ELNDPIDQLQRFEAQAR---------------AKEL---GDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTN +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTNVTTIRDVLLFPTMK 496
>gi|16799337|ref|NP_469605.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
gi|423100928|ref|ZP_17088632.1| lysine--tRNA ligase [Listeria innocua ATCC 33091]
gi|38258397|sp|Q92F47.1|SYK_LISIN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|16412689|emb|CAC95493.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
gi|370792464|gb|EHN60331.1| lysine--tRNA ligase [Listeria innocua ATCC 33091]
Length = 498
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 332/515 (64%), Gaps = 36/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND--HVSVAGRVVA 122
+R +KV+ LR +G++P+ K+ R+ S +EI A+ + + E VSVAGR++
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISP---EEIETKFADKSKEDLEEAAIEVSVAGRIMT 71
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GEL
Sbjct: 72 KRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKL-ADLGDIIGIKGTIFRTNTGEL 130
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
SV F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R
Sbjct: 131 SVKATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRD 190
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+Y
Sbjct: 191 YMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVY 250
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y
Sbjct: 251 EIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTKITYGEY 310
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
++ L WRR M + VKE G+DF + +D + + L K + +
Sbjct: 311 DVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEAHE----------LAKKHDVAVTEHMT 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAF
Sbjct: 361 YGHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAF 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEY
Sbjct: 421 SELNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 461 GLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|15644453|ref|NP_229505.1| lysyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|418045763|ref|ZP_12683858.1| Lysyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|11387158|sp|Q9X231.1|SYK_THEMA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|4982282|gb|AAD36772.1|AE001810_11 lysyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|351676648|gb|EHA59801.1| Lysyl-tRNA synthetase [Thermotoga maritima MSB8]
Length = 502
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 337/512 (65%), Gaps = 35/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+K+++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S AGRV++ R
Sbjct: 9 RLKEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRH 66
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK AF ++DD+G IQ Y + + + ++ D K V IGD +GV G +++ GEL++
Sbjct: 67 HGKTAFFHMKDDTGRIQAYIKADSVGKEKMDLFKRHVKIGDFVGVRGFPFKSKTGELTIY 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L+K+L PLP+K+HG+ D + YRQRY+++I E + F+KR K V IR+ +
Sbjct: 127 VQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVNDEAIERFKKRFKAVRVIREFLN 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GF+EVETP+L GGAEARPFVT+ N D+YLRIA EL+LKR+++GGFEKIYEIG
Sbjct: 187 SRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMYLRIAPELYLKRLIVGGFEKIYEIG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
+ FRNEG+S +H+PEFT+IE+Y+AY+DY MM++TEE++ G L I YQG EI
Sbjct: 247 KNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PW+R M + +KE G+D E +++ + K L G LE K++ +
Sbjct: 307 FTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK---LEEHGVELEIKNR---------AH 354
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L++++ ++ VE +LV PTF++D+P+ ISPLAK HR LTERFEL I GRE+ANAFSEL
Sbjct: 355 LIDKLRDL-VEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSEL 413
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ R EQ + +E D+ ++ +D DFV ALEYGMP
Sbjct: 414 NDPVDQYQRFLEQAKMR------------------EEGDEEAH--MMDLDFVRALEYGMP 453
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+G+DRL M +T+S +IRDVI FPI+K
Sbjct: 454 PTGGLGIGLDRLFMFITDSPTIRDVIPFPIVK 485
>gi|322376864|ref|ZP_08051357.1| lysine--tRNA ligase [Streptococcus sp. M334]
gi|321282671|gb|EFX59678.1| lysine--tRNA ligase [Streptococcus sp. M334]
Length = 496
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMATLREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + ++ A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKSIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|255527651|ref|ZP_05394511.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296186916|ref|ZP_06855317.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255508664|gb|EET85044.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048630|gb|EFG88063.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 502
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/519 (45%), Positives = 335/519 (64%), Gaps = 43/519 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K +L+ +G +P+ YK +RTH ++Q+++ Y L E V+VAGR++++R
Sbjct: 22 RREKFFKLQEQGKDPFDVYKVERTHVSSQIKDNYEEL--------EGKSVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L D G IQLY + + ++ + K F DIGDIL ++G++ +T+ GE+++
Sbjct: 74 VHGKAGFSDLHDRYGKIQLYIKINDVGEERLKEYKSF-DIGDILSITGNVFKTKTGEVTL 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F +L KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR KI+ IR +
Sbjct: 133 HITEFELLAKSLRPLPEKWHGLKDPDLRYRQRYVDLIVNQDVKDTFIKRTKIIKAIRTFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFE++YEI
Sbjct: 193 DDKEYLEVETPILSTIAGGAAAKPFITHHNALSLDMYLRIATELYLKRLIVGGFERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR FRNEG+ RHNPEFT +E+Y+A++DY MM +TE +V V G + Y+ EI
Sbjct: 253 GRNFRNEGMDVRHNPEFTCMELYQAFADYNDMMELTENMVAFVCEKVLGTTKVTYEDTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE TG+DFN + +D + +AKE + N K + + +
Sbjct: 313 DFTPPWRRITMVDAVKEYTGVDFNVISDDEEARGIAKEKHI--------NMKKQLKDCTK 364
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
G++L +FE E KL+QPTFV DYP+E SPL K R +A TERFE F+ GRE+ NA
Sbjct: 365 --GDILIALFEEFCEDKLMQPTFVCDYPVENSPLTKKKRGNAAFTERFEGFVYGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP+ Q+ R +Q+R+ + DD +Y +D+DF+ ALE
Sbjct: 423 YSELNDPIVQKDRFLQQLRER------------------ELGDDEAY--MMDNDFINALE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRL+M LTN++SIRDVI FP +K +Q
Sbjct: 463 IGMPPTGGLGIGIDRLIMFLTNTSSIRDVILFPTMKPEQ 501
>gi|449915227|ref|ZP_21796117.1| lysyl-tRNA synthetase [Streptococcus mutans 15JP3]
gi|449156693|gb|EMB60152.1| lysyl-tRNA synthetase [Streptococcus mutans 15JP3]
Length = 496
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/526 (44%), Positives = 335/526 (63%), Gaps = 31/526 (5%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S T + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N
Sbjct: 2 SHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHDIN 60
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + D + K DIGD LGV
Sbjct: 61 ETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVE 119
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F
Sbjct: 120 GEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFI 179
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR ++ LGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATELHLK
Sbjct: 180 TRSKIISEIRCYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLK 239
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE IV H A AV
Sbjct: 240 RLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAV 299
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I YQG EI + P++R + +L+KE TG+DF KE TL +
Sbjct: 300 KGDGPITYQGTEIKINEPFKRAHIVDLIKEVTGVDF---------WKEMTLAEAQALAQE 350
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+RFEL
Sbjct: 351 KNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNADDPRFTDRFEL 410
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 411 FIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TG 450
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 451 IDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|386042564|ref|YP_005961369.1| lysyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|404409461|ref|YP_006695049.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
gi|345535798|gb|AEO05238.1| lysyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|404229287|emb|CBY50691.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
Length = 498
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 331/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + + L K + + G
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSDEEALE----------LAKKHDVPVTEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KLVQPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLVQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|337285978|ref|YP_004625451.1| lysyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358806|gb|AEH44487.1| lysyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 497
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/527 (44%), Positives = 339/527 (64%), Gaps = 35/527 (6%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
S+ V +R +K EEL S+G+ + ++ A ++EI+ EE V
Sbjct: 2 SEESQVLKVRREKAEELESQGVPLFPNQFKPEDKAGAIKEIFGDY-QPEELEKLEATFKV 60
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++ARR FGK F+ ++D++G IQ++ +++ L +++F K + D+GDI+GV GS+ +
Sbjct: 61 AGRLMARRDFGKAMFIHIQDETGRIQVFIKRDELGAEKFKLFKKYFDLGDIIGVEGSLFK 120
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GEL++L V++TK+L PLP+KYHGL DV+ RYR+RY+D+I V ++FR R +I
Sbjct: 121 TKTGELTILAKEVVLVTKALRPLPEKYHGLQDVELRYRRRYLDLIMNERVREIFRTRTRI 180
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
V R+ S GF+EVETP++Q GGA ARPF TYH++L R+LYLRIA EL+LKR+L+G
Sbjct: 181 VEYFRRYFSSQGFLEVETPMMQPIPGGATARPFKTYHHALERELYLRIAPELYLKRLLVG 240
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
GFE+++E+ R FRNEG+S +HNPEFT +E YEAY+ Y+ +M TEEI A + G
Sbjct: 241 GFERVFELNRNFRNEGISIQHNPEFTMLEFYEAYATYEDLMTRTEEIFVGLARELKGDTK 300
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKV---AKETTLRALGDGLENKD 413
I YQG EI PW + + + G+ L + KV A+E ++
Sbjct: 301 IVYQGQEIDFTPPWPKIPFKQALIDIGGVPEEVLDDREKVIAFAREKEIK---------- 350
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
+ E P +G L ++F+ +VEP+L+QPTF++ +P++ISPLA+ + + + +RFELFI
Sbjct: 351 --IDEREPVLGKLWAKLFDALVEPELIQPTFIIAFPVDISPLARRNEKDPSVADRFELFI 408
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE+ANAFSEL DP DQRAR EEQ+++ +LK DD +D
Sbjct: 409 AGREIANAFSELNDPRDQRARFEEQIKR-----------------RLK--DDPEIHPEID 449
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+DF+ ALEYGMPPA+G G+GIDR+VML T+S SIR+VI FP L+ +Q
Sbjct: 450 EDFIRALEYGMPPAAGEGIGIDRVVMLFTDSPSIREVILFPHLRPEQ 496
>gi|337282354|ref|YP_004621825.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
gi|335369947|gb|AEH55897.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
Length = 496
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 334/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ L+E Y L + E+ + N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSGHLKEKYSEL-DKEQLHDLNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KVTHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +M++TE I+ H A AV+G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + D+ + L N+ +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAV-------ALANEKHVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GQIINAFFEEFVEETLTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ R E Q R A+E DD + +D D+V ALEYG
Sbjct: 423 ELNDPIDQLQRFEAQAR---------------AKEL---GDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTN +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTNVTTIRDVLLFPTMK 496
>gi|315222516|ref|ZP_07864405.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
gi|315188202|gb|EFU21928.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
Length = 505
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/532 (44%), Positives = 337/532 (63%), Gaps = 34/532 (6%)
Query: 47 RRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEE 106
RR + ++ + + +R +K+ L +G++P+ +++RT + QL+E Y EE
Sbjct: 7 RRKNMTTEHIEELNDQQLIRREKMAALAEQGIDPFGKRFERTADSAQLKEKYND-KTKEE 65
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
+ + ++AGR++ +R GK+ F ++D G IQ+Y K+ + + + K DIGD
Sbjct: 66 LHELAETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGD 124
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
LG+ G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E
Sbjct: 125 FLGIEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRES 184
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+ F R++IVSEIR+ +++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIAT
Sbjct: 185 FERFVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIAT 244
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
ELHLKR+++GG E++YE+GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+
Sbjct: 245 ELHLKRLIVGGMERVYEMGRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQS 304
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A AV ++ YQG EI + R + R+ M +KE TGIDF K+ TL
Sbjct: 305 AAKAVTDAESVPYQGTEIFIGRKFARKHMLEAIKEQTGIDF---------WKDMTLEE-A 354
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
L + +E +VG+++N FE VE L+QPTF+ +P+E+SPLAK + T
Sbjct: 355 TALAKEHHVTVEKHFTVGHIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFT 414
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDD 525
+RFELFI GRE ANAF+EL DP+DQ AR E AQ K KE DD
Sbjct: 415 DRFELFIVGREFANAFTELNDPIDQLARFE-------------------AQAKAKELGDD 455
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +D D+V ALEYGMPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 456 EA--TGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 505
>gi|420143643|ref|ZP_14651140.1| Lysine--tRNA ligase (Lysyl-tRNA synthetase) [Lactococcus garvieae
IPLA 31405]
gi|391856514|gb|EIT67054.1| Lysine--tRNA ligase (Lysyl-tRNA synthetase) [Lactococcus garvieae
IPLA 31405]
Length = 495
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/515 (45%), Positives = 327/515 (63%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K+E LR G++P+ +K+ RTH++ +L Y N +E E D H ++AGR++ +
Sbjct: 14 VRREKMETLRESGIDPFGHKFTRTHNSAELHAEYD--ENTKEELHEKDLHATIAGRLMTK 71
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F ++D G IQ+Y K+ + + + K D+GD LGV G + +T+ GELS
Sbjct: 72 RGKGKVGFAHIQDREGQIQIYVRKDEVGEENYQIFKQ-ADLGDFLGVEGQIMKTDMGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ + L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SEIR+
Sbjct: 131 IKASKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG EK+YE
Sbjct: 191 MDGRGYLEVETPVLNNEAGGAAARPFYTHHNSLDIDMALRIATELHLKRLIVGGMEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ HNPEFTT+E YEAY+D+ +M++TE I H A +V GK ++Y G E
Sbjct: 251 LGRVFRNEGMDMTHNPEFTTMESYEAYADFDDIMDLTEGIFQHVAHSVLGKDIVEYDGKE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I + + R M + +KE TG+DF KE + D +V +V
Sbjct: 311 INVGGKFARIHMVDAIKEQTGVDF---------WKEMDFEEAAALAKEHDIYVENHFTTV 361
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE L+QPTFV +P EISPLAK + T+RFELFI G+E ANAFS
Sbjct: 362 GHIINEFFEKYVEDTLIQPTFVFGHPKEISPLAKMNAEDPRFTDRFELFINGKEYANAFS 421
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ R E Q K KE DD + +D D+V ALE+
Sbjct: 422 ELNDPIDQLERFE-------------------VQAKAKELGDDEA--TGVDYDYVEALEH 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 461 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 495
>gi|307709178|ref|ZP_07645637.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
gi|307620124|gb|EFN99241.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|385262433|ref|ZP_10040537.1| lysine--tRNA ligase [Streptococcus sp. SK643]
gi|385190334|gb|EIF37781.1| lysine--tRNA ligase [Streptococcus sp. SK643]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + DL + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DLTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|306829416|ref|ZP_07462606.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
gi|304428502|gb|EFM31592.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEQNYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE+I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEDIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|291530007|emb|CBK95592.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum 70/3]
Length = 649
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 337/515 (65%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+RI+K+ +L++ G PY K+D TH A Q+++ + L E V +AGR+ +
Sbjct: 26 IRIEKLNDLKANGKNPYEITKFDFTHKAQQIRDNFEEL--------EEKDVMIAGRITSW 77
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F+ +RDDSG +Q+Y + + D F + K + D+GDI+GVSG + +T +GE+S
Sbjct: 78 RDMGKANFIDIRDDSGRMQVYVRIDDIGEDNFKEFKKW-DLGDIVGVSGFVFKTRRGEIS 136
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V NS +L+KSLLPLP+K+HGL D ++RYR+RY+D+I+ PE+ D F KR+ I+ EIR
Sbjct: 137 VHANSIKLLSKSLLPLPEKWHGLKDKEERYRKRYLDLIANPEIKDTFVKRSMILREIRSF 196
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S G++EV+TPVL GA ARPFVT+HN+L D+YLRI TEL+LKR+++GGF+++YE
Sbjct: 197 LDSKGYLEVDTPVLHTLEIGAAARPFVTHHNALDIDMYLRIETELYLKRLIVGGFDRVYE 256
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GRIFRNEG+ HNPEFT+IEMY+AY+DY MM++ EE+ AL V G T+ YQG E
Sbjct: 257 VGRIFRNEGMDATHNPEFTSIEMYQAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGNE 316
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK-VAKETTLRALGDGLENKDKFVIESSPS 422
I + +PW+R TM VKE TG+D++ +D VA+ T A I + +
Sbjct: 317 IEIGKPWKRVTMKEAVKEYTGLDYDSWTSDADAVAQAKTKHA-----------EIADTAT 365
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G +L E+FE VE KL+QPT + DYP+E SPLAK TERFE FI E NAF
Sbjct: 366 KGEVLIELFEEFVEEKLIQPTIIYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAF 425
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R +QV + ++ A A +D+DF+TALEY
Sbjct: 426 SELNDPIDQRERFTKQVMEKRKQGANA---------------------QIDEDFLTALEY 464
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DR VMLLT+SASIRDV+ FP +K
Sbjct: 465 GLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTMK 499
>gi|47093173|ref|ZP_00230948.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
gi|417314275|ref|ZP_12100979.1| lysyl-tRNA synthetase [Listeria monocytogenes J1816]
gi|47018480|gb|EAL09238.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
H7858]
gi|328467946|gb|EGF38976.1| lysyl-tRNA synthetase [Listeria monocytogenes J1816]
Length = 498
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 332/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y +
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + A+E L K + + G
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHNVPVTEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|435852936|ref|YP_007314255.1| lysyl-tRNA synthetase (class II) [Halobacteroides halobius DSM
5150]
gi|433669347|gb|AGB40162.1| lysyl-tRNA synthetase (class II) [Halobacteroides halobius DSM
5150]
Length = 492
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/525 (45%), Positives = 349/525 (66%), Gaps = 38/525 (7%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND 112
+T+ S+ + R +K++ L+ +G+ Y ++R+H+ + E Y L E
Sbjct: 2 ATNDSELNELMLKRRRKLDNLKEEGINAYGNDFNRSHTVEDVVEDYDQL------REEKV 55
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
V VAGR++A R GK +F L+D SG +QLY KE + ++ +L +DIGD +G+ G
Sbjct: 56 MVKVAGRIMAVRNHGKSSFADLKDMSGKVQLYV-KEGNVGEEGYELFNDLDIGDQIGIEG 114
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
+ +T +GE+++ V F +L KSL PLP+K+HGLTDV+KRYRQRYVD+I +V F
Sbjct: 115 LLFKTRQGEVTIQVEEFKVLAKSLRPLPEKWHGLTDVEKRYRQRYVDLIVNDDVQQNFII 174
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
R+KI+ +IR+ +E F+EV+TP++ AGGA ARPFVT+HN+L DLY+RIA EL+LKR
Sbjct: 175 RSKILHKIREYLEEEDFLEVQTPLMHSVAGGAAARPFVTHHNALDTDLYMRIAPELYLKR 234
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+L+GGFEK++E+G+ RNEGLST+HNPEFT++E+Y+AY+DY MM +TE+++ + A V
Sbjct: 235 LLVGGFEKVFELGKNMRNEGLSTKHNPEFTSLEVYQAYADYNDMMELTEDLIKNVAGDVL 294
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
L I+Y EI L WR+ +M +KE +DF+ + +DL+ AK AL D NK
Sbjct: 295 DSLEIEYDEQEIDLNN-WRKMSMVEAIKEHADVDFSNV-DDLEEAK-----ALAD---NK 344
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
E++ +VG ++NE FE VE L+QPTF+ YP+E+SPLA+ + + T+RFELF
Sbjct: 345 GIDYNENT-AVGEIINEFFEEYVEDNLIQPTFITQYPVEVSPLARRNPNNPNFTDRFELF 403
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I G E+ANAFSEL DP+DQ+ R ++Q+ E+R A DD ++ +
Sbjct: 404 IAGNEIANAFSELNDPIDQKERFKKQM----EQREAG--------------DDEAH--MM 443
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALEYGMPPA G+G+GIDRL+MLLTNS SIR+VI FP L+
Sbjct: 444 DNDFIRALEYGMPPAGGLGIGIDRLIMLLTNSLSIREVILFPHLR 488
>gi|383938544|ref|ZP_09991753.1| lysine--tRNA ligase [Streptococcus pseudopneumoniae SK674]
gi|418973986|ref|ZP_13521925.1| lysine--tRNA ligase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383346205|gb|EID24270.1| lysine--tRNA ligase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383714604|gb|EID70601.1| lysine--tRNA ligase [Streptococcus pseudopneumoniae SK674]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G +++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGSVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|295102174|emb|CBK99719.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
L2-6]
Length = 503
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/534 (44%), Positives = 335/534 (62%), Gaps = 42/534 (7%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
+ + + S+ E V+ +R +K+ +L++ G +P+ K+ + + L+E ++ L N +
Sbjct: 4 QKKNPAQGLSESEQVQ-VRRQKLADLQAAGRDPFTLTKFPQDAYSADLKEEFKDLPNETD 62
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
S + V++AGR++++R GK +F LRDD G IQLY ++ L D + K +D+GD
Sbjct: 63 SGKK---VALAGRLMSKRVMGKASFAHLRDDKGDIQLYVRRDELGDDAYAAFKK-LDVGD 118
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV G + RT+ GELS +L KSL PLP+K+HGLTD + RYRQRYVD+I+ PEV
Sbjct: 119 IIGVKGEVFRTKTGELSARAEEITLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIANPEV 178
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+ F KR+KI+ EIR ++ GF+EV+TP+L GA ARPF T+HN+L D+ LRI T
Sbjct: 179 KETFVKRSKILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNTLNMDMVLRIET 238
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
EL+LKR+++GG +++YE+GRIFRNEG+ +HNPEFTTIE+Y+A++D+ MM++ EE+
Sbjct: 239 ELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNPEFTTIELYQAFTDFHGMMDLVEELYKR 298
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A + G L I YQG +I + W R TM VK+ +G+DFN+ D + AKE +
Sbjct: 299 LAQKICGSLVIPYQGKQIDMGH-WERLTMIEAVKKYSGVDFNDWKTDEDAIAAAKEHHVE 357
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+ P+ G +L E F+ VE KL+QPTF+ DYP+EISPLAK
Sbjct: 358 -------------LPEVPTKGAILAEFFDAFVEDKLIQPTFIYDYPVEISPLAKRKPDDP 404
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
TERFE FI E NAFSEL DP+DQ+ R E QV + A+ AQ
Sbjct: 405 AFTERFEYFIDCTEYGNAFSELNDPIDQKGRFERQVAERK-----AIEPDCKAQ------ 453
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYG+PP G+G G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 454 --------VDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFPTMK 499
>gi|419442206|ref|ZP_13982237.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13224]
gi|379554173|gb|EHZ19253.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13224]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHATKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + T+ A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKTIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|403253360|ref|ZP_10919661.1| lysyl-tRNA synthetase [Thermotoga sp. EMP]
gi|402810894|gb|EJX25382.1| lysyl-tRNA synthetase [Thermotoga sp. EMP]
Length = 502
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 336/512 (65%), Gaps = 35/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+K+++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S AGRV++ R
Sbjct: 9 RLKEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRH 66
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK AF ++DD+G IQ Y + + ++ D K V IGD +GV G +++ GEL++
Sbjct: 67 HGKTAFFHMKDDTGRIQAYIRADSVGKEKMDLFKRHVKIGDFIGVRGFPFKSKTGELTIY 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L+K+L PLP+K+HG+ D + YRQRY+++I E + F+KR K V IR+ +
Sbjct: 127 VQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVNDEAIERFKKRFKAVRVIREFLN 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GF+EVETP+L GGAEARPFVT+ N D+YLRIA EL+LKR+++GGFEKIYEIG
Sbjct: 187 SRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMYLRIAPELYLKRLIVGGFEKIYEIG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
+ FRNEG+S +H+PEFT+IE+Y+AY+DY MM++TEE++ G L I YQG EI
Sbjct: 247 KNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PW+R M + +KE G+D E +++ + K L G LE K++ +
Sbjct: 307 FTPPWKRVRMRDFLKEKLGVDILEDPDEVLLKK---LEEHGVELEIKNR---------AH 354
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L++++ ++ VE +LV PTF++D+P+ ISPLAK HR LTERFEL I GRE+ANAFSEL
Sbjct: 355 LIDKLRDL-VEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSEL 413
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ R EQ + +E D+ ++ +D DFV ALEYGMP
Sbjct: 414 NDPVDQYQRFLEQAKMR------------------EEGDEEAH--MMDLDFVRALEYGMP 453
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+G+DRL M +T+S +IRDVI FPI+K
Sbjct: 454 PTGGLGIGLDRLFMFITDSPTIRDVIPFPIVK 485
>gi|212696519|ref|ZP_03304647.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
7454]
gi|212676455|gb|EEB36062.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
7454]
Length = 639
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/529 (45%), Positives = 340/529 (64%), Gaps = 49/529 (9%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHS-ANQLQEIYRHLANGEESNSEN 111
+ D + +R +K+E+L++ G P+A R + + ++++ + E
Sbjct: 4 ANKNQDLNEMLQIRREKLEKLKADGKNPHAIVNFRNRTLSKEIKDNFEEF--------EG 55
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V VAGR++ARR G ++F+ ++D G IQ+ ++ ++ D F + K + DIGD++G+
Sbjct: 56 KVVRVAGRIMARRGHGNMSFMDVQDSLGQIQV-VNRKNVMGDNFKETKGY-DIGDLIGIE 113
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +T +GE+S+ +LTKSL LP+K+HGL D D RYRQRYVD+I PEV +VF
Sbjct: 114 GKVFKTNQGEVSIETEHADLLTKSLQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKNVFV 173
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+SEIR+ +E+ GF+EVETP+L AGGA ARPF+T+HNSL +YLRIA+EL+LK
Sbjct: 174 LRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITHHNSLDIGMYLRIASELYLK 233
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GGF+K+YEIGR+FRNEG+ HNPEFTT+E+Y+AY D++ MM ITE +V A V
Sbjct: 234 RLIVGGFDKVYEIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITETMVEDVANKV 293
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELG---NDLKVAKETTLRALGDG 408
G +++ G EI L+ PWRR +M + VKE +G+DFNE+ + +K+AKE
Sbjct: 294 KGSTVVEFDGNEIELKAPWRRVSMIDAVKEYSGVDFNEITEYEDAVKIAKE--------- 344
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
KD +E S G ++ E F+ VE KL+QPTF++DYP+EISPLAK LT R
Sbjct: 345 ---KD---VEVKDSRGEIIAEFFDEFVEDKLIQPTFIVDYPVEISPLAKRKNDDPSLTYR 398
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI G E+ANAFSEL D +DQ+ R +QV KR A E AQ
Sbjct: 399 FEAFINGSEIANAFSELNDAVDQKERFLDQVA----KREAGDDE---AQ----------- 440
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DFV ALE GMPP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 441 --MMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 487
>gi|46906461|ref|YP_012850.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226222857|ref|YP_002756964.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254826414|ref|ZP_05231415.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|254854616|ref|ZP_05243964.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|254933690|ref|ZP_05267049.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|254992593|ref|ZP_05274783.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
gi|300766503|ref|ZP_07076451.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|386730993|ref|YP_006204489.1| lysyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
gi|404279778|ref|YP_006680676.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
gi|404285595|ref|YP_006692181.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405748571|ref|YP_006672037.1| lysyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
gi|405751445|ref|YP_006674910.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
gi|405754313|ref|YP_006677777.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
gi|406703001|ref|YP_006753355.1| lysyl-tRNA synthetase [Listeria monocytogenes L312]
gi|424713093|ref|YP_007013808.1| Lysine--tRNA ligase [Listeria monocytogenes serotype 4b str. LL195]
gi|424821959|ref|ZP_18246972.1| Lysyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
gi|67461802|sp|Q724I4.1|SYK_LISMF RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|46879725|gb|AAT03027.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225875319|emb|CAS04016.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258608011|gb|EEW20619.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|293585254|gb|EFF97286.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|293595655|gb|EFG03416.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|300512785|gb|EFK39884.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|332310639|gb|EGJ23734.1| Lysyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
gi|384389751|gb|AFH78821.1| lysyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
gi|404217771|emb|CBY69135.1| lysyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
gi|404220645|emb|CBY72008.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
gi|404223513|emb|CBY74875.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
gi|404226413|emb|CBY47818.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
gi|404244524|emb|CBY02749.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406360031|emb|CBY66304.1| lysyl-tRNA synthetase [Listeria monocytogenes L312]
gi|424012277|emb|CCO62817.1| Lysine--tRNA ligase [Listeria monocytogenes serotype 4b str. LL195]
Length = 498
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 332/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y +
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + A+E L K + + G
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSD-EEARE---------LAKKHNVPVTEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|47097268|ref|ZP_00234828.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|254829645|ref|ZP_05234332.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|254914105|ref|ZP_05264117.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|254938415|ref|ZP_05270112.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|386045865|ref|YP_005964197.1| lysyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|404412329|ref|YP_006697916.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
gi|47014368|gb|EAL05341.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|258602063|gb|EEW15388.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|258611029|gb|EEW23637.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|293592703|gb|EFG00464.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|345532856|gb|AEO02297.1| lysyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|404238028|emb|CBY59429.1| lysyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
gi|441469777|emb|CCQ19532.1| Lysine--tRNA ligase [Listeria monocytogenes]
gi|441472913|emb|CCQ22667.1| Lysine--tRNA ligase [Listeria monocytogenes N53-1]
Length = 498
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 331/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++ + + EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSK-EELEEAAIEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKL-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I Y ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + + L K + + G
Sbjct: 313 DLTPNWRRIHMADAVKEYVGVDFWNVTSDEEALE----------LAKKHDVPVTEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|422339674|ref|ZP_16420632.1| lysine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370817|gb|EHG18196.1| lysine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 493
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/520 (45%), Positives = 338/520 (65%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDKQ---IMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGIEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV D F KR +I+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+RK ++ GF+EVETP++ GGA A+PFVT+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++++ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVQLSL-KNFARVHMVDMIKEVTGVDF---------WKEMTFEEAKKIAKEHHVEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E ++VQPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMDSVGHIINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV +E ++ +++ + E+ D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFEAQV-----------------EEAMRGNEEATPEI--DESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|148989077|ref|ZP_01820477.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
gi|221231516|ref|YP_002510668.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225854225|ref|YP_002735737.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|415697605|ref|ZP_11456835.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 459-5]
gi|415749121|ref|ZP_11477065.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SV35]
gi|415751803|ref|ZP_11478914.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SV36]
gi|418073561|ref|ZP_12710821.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11184]
gi|418122978|ref|ZP_12759913.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44378]
gi|418127566|ref|ZP_12764462.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP170]
gi|418136736|ref|ZP_12773579.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11663]
gi|418177735|ref|ZP_12814319.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41565]
gi|418182311|ref|ZP_12818872.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA43380]
gi|418216163|ref|ZP_12842887.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Netherlands15B-37]
gi|419431113|ref|ZP_13971259.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP05]
gi|419472761|ref|ZP_14012614.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13430]
gi|419481735|ref|ZP_14021529.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40563]
gi|419497660|ref|ZP_14037368.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47522]
gi|421210666|ref|ZP_15667655.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070035]
gi|421231481|ref|ZP_15688128.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2080076]
gi|421309143|ref|ZP_15759772.1| lysine--tRNA ligase [Streptococcus pneumoniae GA62681]
gi|147925574|gb|EDK76651.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
gi|220673976|emb|CAR68486.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225722991|gb|ACO18844.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|353751138|gb|EHD31771.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11184]
gi|353798451|gb|EHD78781.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44378]
gi|353800027|gb|EHD80341.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP170]
gi|353844509|gb|EHE24552.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41565]
gi|353850548|gb|EHE30552.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA43380]
gi|353873214|gb|EHE53075.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Netherlands15B-37]
gi|353902664|gb|EHE78192.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11663]
gi|379553663|gb|EHZ18747.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13430]
gi|379581414|gb|EHZ46299.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40563]
gi|379599924|gb|EHZ64706.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47522]
gi|379632357|gb|EHZ96933.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP05]
gi|381309499|gb|EIC50332.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SV36]
gi|381317415|gb|EIC58140.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SV35]
gi|381319203|gb|EIC59919.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 459-5]
gi|395575036|gb|EJG35608.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070035]
gi|395596580|gb|EJG56796.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2080076]
gi|395911887|gb|EJH22751.1| lysine--tRNA ligase [Streptococcus pneumoniae GA62681]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYTNL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|421208546|ref|ZP_15665571.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070005]
gi|421224568|ref|ZP_15681314.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070768]
gi|395577016|gb|EJG37570.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070005]
gi|395591904|gb|EJG52199.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070768]
Length = 480
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/512 (44%), Positives = 338/512 (66%), Gaps = 33/512 (6%)
Query: 67 IKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAF 126
+KK+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 1 MKKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKRGK 59
Query: 127 GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLV 186
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 60 GKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKA 118
Query: 187 NSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVES 246
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ ++
Sbjct: 119 THITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQ 178
Query: 247 LGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGR 306
GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEIGR
Sbjct: 179 KGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGR 238
Query: 307 IFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICL 366
IFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI +
Sbjct: 239 IFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKI 298
Query: 367 ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNL 426
P++R M + ++E TG+DF + D+ + + + A K V + VG++
Sbjct: 299 NEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVGHI 349
Query: 427 LNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELT 486
+N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+EL
Sbjct: 350 INAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELN 409
Query: 487 DPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ +R E AQ K KE DD + +D D++ ALEYGMP
Sbjct: 410 DPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYGMP 448
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 449 PTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 480
>gi|334127760|ref|ZP_08501663.1| lysine--tRNA ligase [Centipeda periodontii DSM 2778]
gi|333388896|gb|EGK60066.1| lysine--tRNA ligase [Centipeda periodontii DSM 2778]
Length = 508
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/530 (44%), Positives = 340/530 (64%), Gaps = 35/530 (6%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
R ++++ D + +R +K++ RS G+ P+ ++++ T A L+E Y +LA EE
Sbjct: 5 RETTANAPEQDLNEMMRVRREKMDAFRSMGVAPFGHRFEVTDYAAPLKEKYDYLAEDEEG 64
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
+ V +AGR++A R GK +F TL D +G IQ+Y +++ L ++ + +DIGDI
Sbjct: 65 ----EEVRIAGRLMAIRGHGKASFSTLNDRTGNIQIYFKQDVLGEQKYKEEFKRLDIGDI 120
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV
Sbjct: 121 IGIRGVVFKTRRGEITVRVEDFDLLSKSLRPLPEKFHGLKDVDMRYRQRYLDLMVNLEVR 180
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
+ FRKR KI+ IR+ ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATE
Sbjct: 181 ETFRKRTKIIQSIRRYLDERDFLEVETPVLSTLAGGAAARPFITHHNALDIDLYLRIATE 240
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L LKR+++GG +++YE+GRIFRNEG+ RHNPEFT+IE+Y+A++D++ +M ITE IV
Sbjct: 241 LSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTSIEIYQAFADHRDLMAITEGIVRQA 300
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I YQGV+I L R +M++ V+EATG DF L RA+
Sbjct: 301 AEDVLGTTKITYQGVDIDLNN-VRTISMNDAVREATGKDF------LSCQSVDEARAMAR 353
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
+ E +G +LN FE VE L+QPTF+ +P EISPLAK + +T+
Sbjct: 354 EI----GVPFEERHGIGGILNAAFEAKVEDSLMQPTFITGHPTEISPLAKRNADDPRITD 409
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ GRE+AN F+EL DP+DQ R +Q+ E+R A +E
Sbjct: 410 RFEFFVYGRELANGFTELNDPIDQEQRFLDQL----EQREAGDAEAH------------- 452
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DF+TALEYG+PP G+G+G+DRLVMLLT+S SIRDV+ FP +K
Sbjct: 453 ---IMDRDFITALEYGLPPTGGLGIGVDRLVMLLTDSPSIRDVLLFPTMK 499
>gi|322385813|ref|ZP_08059456.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|417922548|ref|ZP_12566036.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|321270098|gb|EFX53015.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|342832645|gb|EGU66940.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + N+ ++AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYSDKSK-EELHELNEKATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGIEGDVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + L + K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAAAL------AKEKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|15902670|ref|NP_358220.1| lysyl-tRNA synthetase [Streptococcus pneumoniae R6]
gi|116517090|ref|YP_816116.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
gi|148985286|ref|ZP_01818509.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
gi|149005821|ref|ZP_01829560.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
gi|168482937|ref|ZP_02707889.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|168486793|ref|ZP_02711301.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
gi|194397421|ref|YP_002037362.1| lysyl-tRNA synthetase [Streptococcus pneumoniae G54]
gi|225858528|ref|YP_002740038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|307126899|ref|YP_003878930.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
gi|387757148|ref|YP_006064127.1| lysyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
gi|387758977|ref|YP_006065955.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV200]
gi|405760890|ref|YP_006701486.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SPNA45]
gi|417676464|ref|ZP_12325877.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
gi|417695873|ref|ZP_12345053.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
gi|417698140|ref|ZP_12347313.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
gi|418091330|ref|ZP_12728475.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44452]
gi|418095807|ref|ZP_12732923.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16531]
gi|418107092|ref|ZP_12744132.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41410]
gi|418109674|ref|ZP_12746703.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA49447]
gi|418112059|ref|ZP_12749062.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41538]
gi|418120793|ref|ZP_12757739.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44194]
gi|418145931|ref|ZP_12782716.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13637]
gi|418154744|ref|ZP_12791475.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16242]
gi|418168807|ref|ZP_12805453.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA19077]
gi|418175517|ref|ZP_12812115.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41437]
gi|418184483|ref|ZP_12821031.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47283]
gi|418218452|ref|ZP_12845120.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP127]
gi|418220637|ref|ZP_12847293.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47751]
gi|418225138|ref|ZP_12851767.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP112]
gi|418231785|ref|ZP_12858373.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA07228]
gi|418236084|ref|ZP_12862653.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA19690]
gi|418238286|ref|ZP_12864842.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419422001|ref|ZP_13962220.1| lysine--tRNA ligase [Streptococcus pneumoniae GA43264]
gi|419459560|ref|ZP_13999496.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02270]
gi|419461840|ref|ZP_14001756.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02714]
gi|419466841|ref|ZP_14006723.1| lysine--tRNA ligase [Streptococcus pneumoniae GA05248]
gi|419479554|ref|ZP_14019362.1| lysine--tRNA ligase [Streptococcus pneumoniae GA19101]
gi|419488629|ref|ZP_14028382.1| lysine--tRNA ligase [Streptococcus pneumoniae GA44386]
gi|419490645|ref|ZP_14030385.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47179]
gi|419495011|ref|ZP_14034731.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47461]
gi|419499245|ref|ZP_14038944.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47597]
gi|419505660|ref|ZP_14045321.1| lysine--tRNA ligase [Streptococcus pneumoniae GA49194]
gi|419510122|ref|ZP_14049766.1| lysine--tRNA ligase [Streptococcus pneumoniae NP141]
gi|419512112|ref|ZP_14051746.1| lysine--tRNA ligase [Streptococcus pneumoniae GA05578]
gi|419514272|ref|ZP_14053900.1| lysine--tRNA ligase [Streptococcus pneumoniae England14-9]
gi|419516396|ref|ZP_14056014.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02506]
gi|419525458|ref|ZP_14065023.1| lysine--tRNA ligase [Streptococcus pneumoniae GA14373]
gi|419531953|ref|ZP_14071471.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47794]
gi|421212718|ref|ZP_15669680.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070108]
gi|421214905|ref|ZP_15671836.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070109]
gi|421226883|ref|ZP_15683597.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2072047]
gi|421233714|ref|ZP_15690336.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2061617]
gi|421235873|ref|ZP_15692474.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2071004]
gi|421249018|ref|ZP_15705481.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2082239]
gi|421267919|ref|ZP_15718791.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR95]
gi|421272358|ref|ZP_15723205.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR55]
gi|421274627|ref|ZP_15725459.1| lysine--tRNA ligase [Streptococcus pneumoniae GA52612]
gi|421282903|ref|ZP_15733692.1| lysine--tRNA ligase [Streptococcus pneumoniae GA04216]
gi|421302527|ref|ZP_15753192.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17484]
gi|39932186|sp|Q8CWS5.1|SYK_STRR6 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|122278998|sp|Q04LI2.1|SYK_STRP2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710930|sp|B5E317.1|SYK_STRP4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|15458210|gb|AAK99430.1| Lysyl-tRNA synthetase (lysine--tRNA ligase) (LYSRS) [Streptococcus
pneumoniae R6]
gi|116077666|gb|ABJ55386.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
gi|147762761|gb|EDK69721.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
gi|147922484|gb|EDK73603.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
gi|172043813|gb|EDT51859.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|183570273|gb|EDT90801.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
gi|194357088|gb|ACF55536.1| lysyl-tRNA synthetase (classII) [Streptococcus pneumoniae G54]
gi|225721906|gb|ACO17760.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|301799737|emb|CBW32303.1| lysyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
gi|301801566|emb|CBW34262.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV200]
gi|306483961|gb|ADM90830.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
gi|332077129|gb|EGI87591.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
gi|332202581|gb|EGJ16650.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
gi|332203870|gb|EGJ17937.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
gi|353766703|gb|EHD47243.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44452]
gi|353772587|gb|EHD53093.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16531]
gi|353780569|gb|EHD61026.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41410]
gi|353784967|gb|EHD65387.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA49447]
gi|353785708|gb|EHD66126.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41538]
gi|353793620|gb|EHD73979.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44194]
gi|353815869|gb|EHD96082.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13637]
gi|353823036|gb|EHE03211.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16242]
gi|353836726|gb|EHE16814.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA19077]
gi|353844077|gb|EHE24121.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41437]
gi|353852081|gb|EHE32071.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47283]
gi|353876649|gb|EHE56498.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP127]
gi|353877506|gb|EHE57349.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47751]
gi|353882446|gb|EHE62257.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP112]
gi|353888091|gb|EHE67867.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA07228]
gi|353894013|gb|EHE73758.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA19690]
gi|353894709|gb|EHE74450.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379534432|gb|EHY99644.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02270]
gi|379534731|gb|EHY99941.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02714]
gi|379543554|gb|EHZ08703.1| lysine--tRNA ligase [Streptococcus pneumoniae GA05248]
gi|379559849|gb|EHZ24876.1| lysine--tRNA ligase [Streptococcus pneumoniae GA14373]
gi|379573208|gb|EHZ38164.1| lysine--tRNA ligase [Streptococcus pneumoniae GA19101]
gi|379589332|gb|EHZ54171.1| lysine--tRNA ligase [Streptococcus pneumoniae GA43264]
gi|379590744|gb|EHZ55582.1| lysine--tRNA ligase [Streptococcus pneumoniae GA44386]
gi|379594224|gb|EHZ59034.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47179]
gi|379597375|gb|EHZ62178.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47461]
gi|379602299|gb|EHZ67070.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47597]
gi|379607574|gb|EHZ72320.1| lysine--tRNA ligase [Streptococcus pneumoniae GA49194]
gi|379608709|gb|EHZ73454.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47794]
gi|379633315|gb|EHZ97884.1| lysine--tRNA ligase [Streptococcus pneumoniae NP141]
gi|379636582|gb|EIA01140.1| lysine--tRNA ligase [Streptococcus pneumoniae GA05578]
gi|379638762|gb|EIA03307.1| lysine--tRNA ligase [Streptococcus pneumoniae England14-9]
gi|379640399|gb|EIA04938.1| lysine--tRNA ligase [Streptococcus pneumoniae GA02506]
gi|395581125|gb|EJG41598.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070108]
gi|395582464|gb|EJG42926.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070109]
gi|395597953|gb|EJG58159.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2072047]
gi|395602611|gb|EJG62753.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2061617]
gi|395604792|gb|EJG64924.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2071004]
gi|395615647|gb|EJG75663.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2082239]
gi|395871343|gb|EJG82449.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR95]
gi|395875355|gb|EJG86436.1| lysine--tRNA ligase [Streptococcus pneumoniae GA52612]
gi|395877917|gb|EJG88986.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR55]
gi|395882769|gb|EJG93813.1| lysine--tRNA ligase [Streptococcus pneumoniae GA04216]
gi|395903341|gb|EJH14273.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17484]
gi|404277779|emb|CCM08330.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SPNA45]
gi|429317579|emb|CCP37364.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SPN034156]
gi|429319121|emb|CCP32357.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SPN034183]
gi|429320936|emb|CCP34331.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SPN994039]
gi|429322756|emb|CCP30372.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SPN994038]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|169832789|ref|YP_001694171.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
gi|225856392|ref|YP_002737903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
gi|419492847|ref|ZP_14032574.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47210]
gi|421289341|ref|ZP_15740093.1| lysine--tRNA ligase [Streptococcus pneumoniae GA54354]
gi|421304660|ref|ZP_15755316.1| lysine--tRNA ligase [Streptococcus pneumoniae GA62331]
gi|444409197|ref|ZP_21205794.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0076]
gi|444411951|ref|ZP_21208277.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0153]
gi|444422056|ref|ZP_21217720.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0446]
gi|238688279|sp|B1IAN6.1|SYK_STRPI RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|168995291|gb|ACA35903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
gi|225725099|gb|ACO20951.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
gi|379594885|gb|EHZ59694.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47210]
gi|395890601|gb|EJH01607.1| lysine--tRNA ligase [Streptococcus pneumoniae GA54354]
gi|395905322|gb|EJH16227.1| lysine--tRNA ligase [Streptococcus pneumoniae GA62331]
gi|444275283|gb|ELU80910.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0153]
gi|444279931|gb|ELU85311.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0076]
gi|444288552|gb|ELU93444.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0446]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF ++ TL+ K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDF---------WQDMTLKEAKAIAAEKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|418977537|ref|ZP_13525353.1| lysine--tRNA ligase [Streptococcus mitis SK575]
gi|383349724|gb|EID27646.1| lysine--tRNA ligase [Streptococcus mitis SK575]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|317055780|ref|YP_004104247.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
gi|315448049|gb|ADU21613.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
Length = 525
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/529 (45%), Positives = 331/529 (62%), Gaps = 44/529 (8%)
Query: 63 RALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDH-------- 113
+ +R++K++ L+ +G +P+ K+D T S + IY ++ + D
Sbjct: 24 KKIRMEKLKALQDEGADPFQITKYDVTASCEDAKAIYEKTEAECKTQAGEDEETLAAKLE 83
Query: 114 -----VSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
VS+AGR++++R GK +F+ LRD SG IQLY + + FD+ DIGDI+
Sbjct: 84 ENRVRVSIAGRIMSKRMMGKASFMDLRDKSGKIQLYVRMNEVGKEAFDRYVKKGDIGDIV 143
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
G++G + RT GE+SV SF +L+K+L PLP+K+HGL D D RYRQRY D+I PEV D
Sbjct: 144 GITGFVFRTRMGEISVHAESFTLLSKNLQPLPEKWHGLKDQDTRYRQRYTDLICNPEVKD 203
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI+S IR+ ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL
Sbjct: 204 TFIKRSKIISTIRRYLDERGFMEVETPMLVSNAGGAAARPFETHYNALDEDVKLRISLEL 263
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ RHNPEFT +E+Y+AY+DY MM++TE++ H A
Sbjct: 264 YLKRLIVGGLERVYEIGRVFRNEGVDARHNPEFTLMELYQAYTDYHGMMDLTEDMFRHLA 323
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y +I L +P+ R TM VK+ G+DFNE +K +E A
Sbjct: 324 ETVCGGTTIPYGEHQIDLGKPFERLTMIEAVKKYAGVDFNE----IKTTEEAKALAKEKH 379
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E +D+ G++LN FE VE L+QPTF++D+PIEISPL K ER
Sbjct: 380 IEFEDRH------KRGDILNLFFEEYVEEHLIQPTFIMDHPIEISPLTKKKPDAPDYVER 433
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI G EM NA+SEL DP+DQR R + Q +E L D+ +
Sbjct: 434 FELFINGWEMCNAYSELNDPIDQRERFKAQ------------------EEALSNGDEEAN 475
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 476 RT--DEDFLRALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 522
>gi|402829068|ref|ZP_10877949.1| lysine--tRNA ligase [Slackia sp. CM382]
gi|402284822|gb|EJU33315.1| lysine--tRNA ligase [Slackia sp. CM382]
Length = 502
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 328/515 (63%), Gaps = 38/515 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K L + G PY +++ +H A L+E Y L +G S D V V+GR++A R
Sbjct: 20 VRRNKRAALIAAGKNPYGSRFEYSHHARDLEEAYADLEDGA---STEDVVKVSGRIMAIR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+AF+ +RD +G IQL+C L + +D++K +D+GD +G G++ RT +G+LSV
Sbjct: 77 NQGKIAFIVIRDLTGDIQLFCRVNVLGEEAYDEVKD-LDVGDWVGAEGTVIRTRRGQLSV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S +L+KSL PLP+K+HGL+D + RYRQRYVD++ +V D F KR IVS IR+ +
Sbjct: 136 APTSVRLLSKSLRPLPEKFHGLSDKEIRYRQRYVDLVMNQDVRDTFVKRFAIVSAIRRYM 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
ES GF EVETP+LQ GGA ARPFVT+HN+L D YLRIATEL LKR+L+GG E+++EI
Sbjct: 196 ESQGFFEVETPMLQPIMGGANARPFVTHHNALDMDFYLRIATELPLKRLLVGGLERVFEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+A+SD + MM++T ++ A A G L ++YQG I
Sbjct: 256 GRIFRNEGMDPYHNPEFTTIEAYQAFSDLEGMMDLTRGMIQAAAQAACGTLQVEYQGRAI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSPS 422
L W TM +L E G E+G D R+ D + + IE+S
Sbjct: 316 DLSGTWTTRTMCDLASEYAG---EEVGMD---------RSWEDLAAIARRGGASIEASWG 363
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G L++E+FE VE KLVQPTFV ++P+EISPLAK + T RFELFICG E ANAF
Sbjct: 364 KGKLISEIFEAFVEDKLVQPTFVTEHPLEISPLAKKLPDNPEFTYRFELFICGHEYANAF 423
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ R Q+ E +A DD + E D D++ ALEY
Sbjct: 424 NELNDPIDQEERFAAQM----EAKAGG--------------DDEAME--YDSDYIRALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPPA G+G+GIDRLVMLLT+S +IRDV+ FP ++
Sbjct: 464 GMPPAGGVGVGIDRLVMLLTDSETIRDVLLFPHMR 498
>gi|418193352|ref|ZP_12829845.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47439]
gi|353860075|gb|EHE40022.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47439]
Length = 496
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF ++ TL+ K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDF---------WQDMTLKEAKAIAAEKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|291556890|emb|CBL34007.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum V10Sc8a]
Length = 503
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 337/515 (65%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+RI+K+ +L++ G PY K+D TH A Q+++ + L E V +AGR+ +
Sbjct: 26 IRIEKLNDLKANGKNPYEITKFDFTHKAQQIRDNFEEL--------EEKDVMIAGRITSW 77
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F+ +RDDSG +Q+Y + + D F + K + D+GDI+GVSG + +T +GE+S
Sbjct: 78 RDMGKANFIDIRDDSGRMQVYVRIDDIGEDNFKEFKKW-DLGDIVGVSGFVFKTRRGEIS 136
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V S +L+KSLLPLP+K+HGL D ++RYR+RY+D+I+ PE+ D F KR+ I+ EIR
Sbjct: 137 VHAKSIKLLSKSLLPLPEKWHGLKDKEERYRKRYLDLIANPEIKDTFVKRSMILREIRSF 196
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S G++EV+TPVL GA ARPFVT+HN+L D+YLRI TEL+LKR+++GGF+++YE
Sbjct: 197 LDSRGYLEVDTPVLHTLEIGAAARPFVTHHNALDIDMYLRIETELYLKRLIVGGFDRVYE 256
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GRIFRNEG+ HNPEFT+IEMY+AY+DY MM++ EE+ AL V G T+ YQG E
Sbjct: 257 VGRIFRNEGMDATHNPEFTSIEMYQAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGKE 316
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK-VAKETTLRALGDGLENKDKFVIESSPS 422
I + +PW+R TM VKE TG+D++ +D + VA+ T A I + +
Sbjct: 317 IEIGKPWKRMTMKEAVKEYTGLDYDSWTSDAEAVAQAKTKHA-----------EIADTAT 365
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G +L E+FE VE KL+QPT + DYP+E SPLAK TERFE FI E NAF
Sbjct: 366 KGEVLIELFEEFVEDKLIQPTIIYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAF 425
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R +QV + ++ A A +D+DF+TALEY
Sbjct: 426 SELNDPIDQRERFTKQVMEKRKQGANA---------------------QIDEDFLTALEY 464
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DR VMLLT+SASIRDV+ FP +K
Sbjct: 465 GLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTMK 499
>gi|307705122|ref|ZP_07641999.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
gi|417850079|ref|ZP_12495994.1| lysine--tRNA ligase [Streptococcus mitis SK1080]
gi|307621318|gb|EFO00378.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
gi|339455412|gb|EGP68019.1| lysine--tRNA ligase [Streptococcus mitis SK1080]
Length = 496
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|220927852|ref|YP_002504761.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
gi|219998180|gb|ACL74781.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
Length = 499
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/523 (46%), Positives = 336/523 (64%), Gaps = 44/523 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D + +R K+++L+ K +P+ K+D T+S+ + + L E + S+
Sbjct: 15 DLSEILRVRRAKLKDLQEKNSDPFKIVKYDVTNSSQNIINNFDSL--------EGQNASI 66
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK F L+D G IQLY K+ + + ++ K + DIGDI+GV G + +
Sbjct: 67 AGRLMSKRGMGKAGFCDLQDRDGRIQLYVRKDEVGDEVYEMFKKY-DIGDIVGVQGEIFK 125
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T KGE+S+ V +L+KSLLPLP+K+HGL D D RYRQRYVD+I PEV + F R+KI
Sbjct: 126 THKGEISIKVKEITLLSKSLLPLPEKWHGLKDTDLRYRQRYVDLIVNPEVKNTFILRSKI 185
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+ IRK ++ GF+EV+TP+L GGA ARPF+T+HN+L D+YLRIA EL+LKR+++G
Sbjct: 186 IKSIRKFLDDRGFLEVDTPLLNTIPGGAAARPFITHHNTLDIDMYLRIAPELYLKRLIVG 245
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G EK+YE+GR+FRNEG+S +HNPEFT +E+YEAY+DY+ MM +TE +V+ A+ G
Sbjct: 246 GMEKVYEMGRMFRNEGMSVKHNPEFTMMEVYEAYNDYKGMMELTENLVSTVAMETLGTTK 305
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDGLENKDK 414
I YQG EI L PW R TM VKE TGIDF+ + D K A E+ + +G+
Sbjct: 306 IQYQGQEIDLTPPWNRMTMIEAVKEYTGIDFDTIKTDEEAKAAAESKKVHVKEGMVR--- 362
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
G +LN +FE VE LVQPTF+ DYP+EISPL K LTERFE FI
Sbjct: 363 ---------GEILNLMFEEFVESNLVQPTFIYDYPVEISPLTKRKPDCPELTERFEFFIT 413
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GREM NA+SEL DP+DQ+ R QV+ KR + E + +D+
Sbjct: 414 GREMGNAYSELNDPIDQKERFVSQVK----KRDSGDEEAN----------------MMDE 453
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+VTALEYGMPP G+G+G+DRLV+LLT+SASIRD++ FP +K
Sbjct: 454 DYVTALEYGMPPTGGLGIGVDRLVILLTDSASIRDILLFPTMK 496
>gi|335032188|ref|ZP_08525593.1| lysine--tRNA ligase [Streptococcus anginosus SK52 = DSM 20563]
gi|333767659|gb|EGL44890.1| lysine--tRNA ligase [Streptococcus anginosus SK52 = DSM 20563]
Length = 495
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAEAATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E D F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF KE TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKEMTLEE-ATALAKEYHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|402309894|ref|ZP_10828865.1| lysine--tRNA ligase [Eubacterium sp. AS15]
gi|400370275|gb|EJP23265.1| lysine--tRNA ligase [Eubacterium sp. AS15]
Length = 500
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/516 (43%), Positives = 338/516 (65%), Gaps = 44/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR K+ ++++G +P+ K+D+TH + Q+++ + N E VSVAGR+++
Sbjct: 14 LRYDKLVRMQNEGRDPFKIEKFDQTHHSKQIKDDF--------ENFEGKEVSVAGRMMSF 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R+FGK F+ ++D G IQ Y +K+ L + K F DIGD++GV+G + +T+K E+S
Sbjct: 66 RSFGKSTFVDVQDKDGKIQCYAKKDELGEKLYKAFKEF-DIGDVIGVTGVVFKTQKDEIS 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ ++ +L+KSL LP+KYHGL D+D RYRQRYVD+I PEV + F R K + +R+
Sbjct: 125 IKMHDVKLLSKSLRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKALREF 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+E F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGFEK+YE
Sbjct: 185 LEQREFIEVETPILNTIAGGATARPFITHHNTLDIDMYLRIANELYLKRLIVGGFEKVYE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ +HNPE+T +E+Y+AY+DY+ +M +TEE++ + ++A G + YQG +
Sbjct: 245 MGRMFRNEGMDIKHNPEYTAMELYQAYADYEDIMKLTEELIAYMSVAATGSTLVTYQGKQ 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I L+ PWRR +M + +KE IDF ++ D + +E K IE P +
Sbjct: 305 IDLKPPWRRLSMTDAIKEYANIDFEDIKTD------------EEAVELARKHNIEIIPEM 352
Query: 424 --GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
G+++ +FE E KL+ PTF+ +P+EISPL+K + +T RFE F+ E+ANA
Sbjct: 353 KRGHVIAGIFEKYCEDKLIDPTFITHHPVEISPLSKRNPEDPRITNRFEAFVNTWEIANA 412
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQRAR +Q+RQ +E D ++ LD+DF+ A+E
Sbjct: 413 FSELNDPIDQRARFMDQLRQ-------------------RELGDEEAQM-LDEDFLNAIE 452
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 453 VGLPPTGGLGIGIDRVIMLLTNSASIRDVILFPTMK 488
>gi|222055188|ref|YP_002537550.1| lysyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|221564477|gb|ACM20449.1| lysyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/512 (45%), Positives = 326/512 (63%), Gaps = 34/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +KV+ + G+ PY + H++ L Y N +E ++ H VAGR++ARR+
Sbjct: 13 RRRKVDSMWEAGINPYPNDFRPEHTSADLVAAY---GNVQEIEADPQHFIVAGRIIARRS 69
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF+ L+D G QLY +K+ + + F+Q + F DIGDI+G +G RT+ GELS+
Sbjct: 70 FGKAAFVQLQDRKGRFQLYVKKDAVGEEVFEQFESF-DIGDIVGATGYPFRTKTGELSLH 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V +LTKSLLPLP+K+HGLTDV+ RYRQRYVD+I PEV ++F KR+++++ IR+ +
Sbjct: 129 VEQIRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRELFVKRSRVINLIREFMV 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
F+EVETP++Q GGA ARPFVT+HN+L +L+LRIA EL+LKR+++GG ++++EI
Sbjct: 189 KNDFLEVETPMMQQIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVGGLDRVFEIN 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y+AY+ ++ +MN TEE++ H A V G L YQG+ I
Sbjct: 249 RNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQNVLGTLDFSYQGMPIS 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+RPW+R T+ + E ID AK R + K + G
Sbjct: 309 FQRPWKRFTVKEAILEYGDID----------AKSLEDRDMAYAYAKKIGLDLPEDIGYGK 358
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L+ E+FE V E KL+QPTF+ YP E+SPL++ + +RFE F GREMANAFSEL
Sbjct: 359 LITEIFEEVAETKLIQPTFITAYPTEVSPLSRKSDHDPEIVDRFEFFCAGREMANAFSEL 418
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ+ R QV AA K K ++ Y +D+D++ ALEYGMP
Sbjct: 419 NDPVDQKERFLAQV-------AA----------KAKGDEEAHY---MDEDYIRALEYGMP 458
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P +G G+GIDRLVMLL ++ SIRDVI FP L+
Sbjct: 459 PTAGEGIGIDRLVMLLCDAPSIRDVILFPQLR 490
>gi|418132325|ref|ZP_12769200.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11304]
gi|418161749|ref|ZP_12798440.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17328]
gi|419452784|ref|ZP_13992758.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP03]
gi|419529837|ref|ZP_14069368.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40028]
gi|421265745|ref|ZP_15716628.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR27]
gi|421298167|ref|ZP_15748857.1| lysine--tRNA ligase [Streptococcus pneumoniae GA60080]
gi|353807991|gb|EHD88260.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11304]
gi|353831339|gb|EHE11468.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17328]
gi|379574577|gb|EHZ39515.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40028]
gi|379627368|gb|EHZ91980.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP03]
gi|395868481|gb|EJG79598.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR27]
gi|395903670|gb|EJH14598.1| lysine--tRNA ligase [Streptococcus pneumoniae GA60080]
Length = 491
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 10 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 69 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 128 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 188 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 248 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 308 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 359 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 419 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 457
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 458 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 491
>gi|125623258|ref|YP_001031741.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|389853586|ref|YP_006355830.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
gi|166229809|sp|A2RIA0.1|SYK_LACLM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|124492066|emb|CAL96994.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|300070008|gb|ADJ59408.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 494
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/519 (45%), Positives = 327/519 (63%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+E LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMENLRDAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG E
Sbjct: 186 IRRYMDGRGYLEVETPVLNNEAGGASARPFYTHHNSLDIDMALRIATELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR+FRNEG+ HNPEFTT+E YEAY+D++ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|257124941|ref|YP_003163055.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257048880|gb|ACV38064.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 494
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 336/515 (65%), Gaps = 44/515 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
++KKVEEL+ G+EPY K+ + N++ EI ++ E+ AGR+VA R
Sbjct: 15 KLKKVEELKEIGVEPYGRKYAK---LNEIAEINQYDETCEKI------FKTAGRIVAFRR 65
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D +G IQ Y +K+ + +Q+ K + +GD +G+ G + RT GEL++
Sbjct: 66 MGKNGFGQIQDPTGKIQYYVKKDEVGEEQYKIYKK-MGLGDFIGLEGKLFRTNTGELTLR 124
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V+SF +L+K++ PLP+K+HGLT+++ RYRQRYVD++ EV + +KR +I+ R +E
Sbjct: 125 VDSFEVLSKNVRPLPEKFHGLTNIETRYRQRYVDLVMNREVMETMKKRFQIIRFFRSYLE 184
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF EVETP++ AGGA ARPFVT+HN+L +L+LRIA EL+LKR+L+GGFEK++EI
Sbjct: 185 KHGFTEVETPMMHPVAGGATARPFVTHHNALDMELFLRIAPELYLKRLLVGGFEKVFEIN 244
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S +HNPEFT +E+Y+AY+D+ MM++TE++++ ++GK I+Y+ I
Sbjct: 245 RSFRNEGISIKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFELHGKYEIEYEDKTIN 304
Query: 366 LERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESSPS 422
+ +PWRR TM ++VKE TG DF+ + +D + AKE + KDK + +
Sbjct: 305 MAKPWRRVTMKDIVKETTGFDFDTISSDEDAINKAKEMNIPL------EKDK-----TYT 353
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
+LN +FE VE L+ PTF+ +YP EISPL+K + +RFELFI GRE ANA+
Sbjct: 354 KYGILNLIFEEKVEETLLNPTFITEYPKEISPLSKNQKGETEWVDRFELFISGREFANAY 413
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP DQ+ R EEQV KL+E+ D + +D D++ ALEY
Sbjct: 414 SELNDPRDQKERFEEQV-------------------KLREAGDDEAQ-GMDLDYIRALEY 453
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPPA G+G+GIDRLVML TNSASIRDVI FP L+
Sbjct: 454 GMPPAGGLGIGIDRLVMLQTNSASIRDVILFPTLR 488
>gi|373457568|ref|ZP_09549335.1| Lysyl-tRNA synthetase [Caldithrix abyssi DSM 13497]
gi|371719232|gb|EHO41003.1| Lysyl-tRNA synthetase [Caldithrix abyssi DSM 13497]
Length = 497
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/526 (44%), Positives = 333/526 (63%), Gaps = 55/526 (10%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR G+ PY Y++ +TH + +++E + L E VSVAGR++ R
Sbjct: 10 VRFEKLNRLRELGINPYPYEYPQTHKSREIKENFEKL--------EKQIVSVAGRMMTVR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK AF ++D+ G IQ+Y K + F+ K+ +DIGD++G G + +T GE+SV
Sbjct: 62 LMGKAAFCDIQDEQGRIQIYVRKNEIGEQDFEIFKM-LDIGDLVGFKGEVFKTRTGEISV 120
Query: 185 LVNSFVILTKSLLPLP---DK--------YHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
F +L KSL PLP +K Y D + RYRQRYVD+I PEV +VF KR
Sbjct: 121 FAREFKLLAKSLRPLPIVKEKEEDGKRIVYDQFADKEMRYRQRYVDLIVNPEVKEVFVKR 180
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
+I+ IR ++ GF+EVETP+LQ GGA ARPFVT+HN+L R LYLRIA EL+LKR+
Sbjct: 181 TQIIRAIRAFLDERGFLEVETPILQPIYGGATARPFVTHHNALDRKLYLRIANELYLKRL 240
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE + FRNEG+ HNPEFT +E+Y AY DY+ MM+ E++ H A V G
Sbjct: 241 IVGGFERVYEFAKDFRNEGMDRFHNPEFTLLELYVAYKDYKWMMDFVEQLFAHVAQTVLG 300
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I + G EI L PW+R TM+ +++ TG++ +++ E LR + + L+
Sbjct: 301 TTKIRFSGHEIDLSPPWQRLTMYEAIEKFTGVNISDMD-------EKQLREVAEKLK--- 350
Query: 414 KFVIESSPSVGN--LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+E +P +G+ +++E+F VEPKL+QPTF+ DYPIE+SPLAK HR +GL ERFE
Sbjct: 351 ---VEVTPEMGSGKIIDEIFGEHVEPKLIQPTFIYDYPIEMSPLAKKHREKSGLVERFEP 407
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
I G+E+ANAFSEL DP+DQ+ R EQ+ KL+E D ++
Sbjct: 408 IIAGKEVANAFSELNDPIDQKERFLEQL-------------------KLRERGDEEAQM- 447
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+D++ ALEYGMPP +G+G+GIDRLVML+T+ SIRDVI FP ++
Sbjct: 448 MDEDYIRALEYGMPPTAGLGIGIDRLVMLITDQPSIRDVILFPQMR 493
>gi|254304063|ref|ZP_04971421.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148324255|gb|EDK89505.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 493
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/520 (45%), Positives = 338/520 (65%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDKQ---IMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGIEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV D F KR +I+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+RK ++ GF+EVETP++ GGA A+PFVT+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++++ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVKLSL-KNFARVHMVDMIKEVTGVDF---------WKEMTFEEAKKIAKEHHVEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E ++VQPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMDSVGHIINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV +E ++ +++ + E+ D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFEAQV-----------------EEAMRGNEEATPEI--DESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|417990818|ref|ZP_12631281.1| class II lysyl-tRNA synthetase [Lactobacillus casei A2-362]
gi|410533531|gb|EKQ08205.1| class II lysyl-tRNA synthetase [Lactobacillus casei A2-362]
Length = 499
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 337/521 (64%), Gaps = 50/521 (9%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN----SENDHVSVAGRVV 121
R +K+E LR G++P+ +++DRTH+A +++E + GE+ E V++AGR++
Sbjct: 19 RREKMEALREAGIDPFGHRFDRTHTAAKVREEF-----GEDDKETLLDEKPEVTIAGRMM 73
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F +RD SG +Q+Y K+ + D + K D+GDILG+SG + +T+ GE
Sbjct: 74 SKRGKGKVGFADIRDRSGKMQIYVRKDVVGDDNYMIFKK-ADLGDILGISGEVMKTDSGE 132
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+V N L K+L PLPDK+HGLTDV+++YR+RY+D+IS + D F KR KIVS +R
Sbjct: 133 LTVKANHVTHLAKALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVR 192
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ +++ GF+EVETPVL AGGA ARPFVT+HN+L DLYLRIA ELHLKR+++GG E++
Sbjct: 193 EYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHLKRLIVGGMERV 252
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV--NGKLTIDY 359
YEIGR+FRNEG+ T+HNPEFT +E Y AY D +M TE I A V GKLT Y
Sbjct: 253 YEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--Y 310
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG+ I L+ P+ R M + +K+ TG+DF E+ D D + D+ +
Sbjct: 311 QGMAIDLDAPFARINMLDAIKDKTGVDFWPEMSVD-------------DARKLADEHDVH 357
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
P VG++++ F+ VE L+QPTF+ +PIE+SPLAK + + ERFELF+ G
Sbjct: 358 YEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGG 417
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E ANAF EL DP+DQR R E Q +EKS+ ++ + +DDD+
Sbjct: 418 EYANAFIELNDPIDQRQRFEAQ-----------AAEKSAGNDEAQ---------GIDDDY 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
V ALEYGMPP G+G+GIDRLVMLLT++ SIRDV+ FP L+
Sbjct: 458 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLR 498
>gi|225870836|ref|YP_002746783.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
gi|225700240|emb|CAW94458.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
Length = 497
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 327/514 (63%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ ++DRT ++ +L+E Y E+ +AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFDRTTNSGELKEKYSD-KTKEDLQELQATAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + D +D K D+GD +GV G + T+ GELS+
Sbjct: 74 GKGKVGFAHLQDRQGQIQIYVRKDSVGDDNYDIFKK-ADLGDFIGVEGDIMCTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+KSL PLP+K+HGLTD++ YR+R++D+IS + F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRSSFERFITRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRIAPELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+YEAY+DY MM +TE I+ H A AV G+ IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
L P+RR M + +KE TGIDF E T L N+ +E SV
Sbjct: 313 KLHEPFRRVHMVDAIKEVTGIDF---------WPEMTFEE-ATALANEKHVPVEKHFTSV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+E+SPLAK + + T+RFELFI +E ANAF+
Sbjct: 363 GHIINAFFEAFVEDTLIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ +R + Q AA E DD + +D DFV ALEYG
Sbjct: 423 ELNDPIDQLSRFKAQ---------AAAKEL---------GDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLTN+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496
>gi|111656835|ref|ZP_01407683.1| hypothetical protein SpneT_02001903 [Streptococcus pneumoniae
TIGR4]
gi|149020353|ref|ZP_01835245.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
gi|168492226|ref|ZP_02716369.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
gi|168492864|ref|ZP_02717007.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|410476161|ref|YP_006742920.1| lysine--tRNA ligase [Streptococcus pneumoniae gamPNI0373]
gi|417686158|ref|ZP_12335436.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
gi|418075820|ref|ZP_12713060.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47502]
gi|418078205|ref|ZP_12715428.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 4027-06]
gi|418081091|ref|ZP_12718301.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 6735-05]
gi|418089106|ref|ZP_12726264.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA43265]
gi|418098081|ref|ZP_12735181.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 6901-05]
gi|418102430|ref|ZP_12739506.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP070]
gi|418114201|ref|ZP_12751192.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 5787-06]
gi|418116438|ref|ZP_12753412.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 6963-05]
gi|418129883|ref|ZP_12766767.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA07643]
gi|418159351|ref|ZP_12796054.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17227]
gi|418173072|ref|ZP_12809686.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41277]
gi|418186723|ref|ZP_12823253.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47360]
gi|418229454|ref|ZP_12856062.1| lysyl-tRNA synthetase [Streptococcus pneumoniae EU-NP01]
gi|419433372|ref|ZP_13973491.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40183]
gi|419439924|ref|ZP_13979978.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40410]
gi|419464007|ref|ZP_14003900.1| lysine--tRNA ligase [Streptococcus pneumoniae GA04175]
gi|419475106|ref|ZP_14014947.1| lysine--tRNA ligase [Streptococcus pneumoniae GA14688]
gi|419477381|ref|ZP_14017206.1| lysine--tRNA ligase [Streptococcus pneumoniae GA18068]
gi|419486217|ref|ZP_14025984.1| lysine--tRNA ligase [Streptococcus pneumoniae GA44128]
gi|419520655|ref|ZP_14060252.1| lysine--tRNA ligase [Streptococcus pneumoniae GA05245]
gi|419534151|ref|ZP_14073658.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17457]
gi|421242707|ref|ZP_15699229.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2081074]
gi|421246965|ref|ZP_15703453.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2082170]
gi|421270138|ref|ZP_15720995.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR48]
gi|421280696|ref|ZP_15731495.1| lysine--tRNA ligase [Streptococcus pneumoniae GA04672]
gi|444388114|ref|ZP_21186106.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS125219]
gi|444390163|ref|ZP_21188078.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS70012]
gi|444391588|ref|ZP_21189406.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS81218]
gi|444394204|ref|ZP_21191757.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0002]
gi|444397155|ref|ZP_21194642.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0006]
gi|444400326|ref|ZP_21197733.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0007]
gi|444403437|ref|ZP_21200531.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0008]
gi|444404525|ref|ZP_21201476.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0009]
gi|444408828|ref|ZP_21205458.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0010]
gi|444414633|ref|ZP_21210886.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0199]
gi|444418051|ref|ZP_21214045.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0360]
gi|444419151|ref|ZP_21215033.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0427]
gi|39932232|sp|Q97RS9.2|SYK_STRPN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|147930655|gb|EDK81637.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
gi|183573509|gb|EDT94037.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
gi|183576861|gb|EDT97389.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|332075995|gb|EGI86461.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
gi|353747396|gb|EHD28052.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 4027-06]
gi|353750395|gb|EHD31035.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47502]
gi|353751830|gb|EHD32461.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 6735-05]
gi|353762793|gb|EHD43351.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA43265]
gi|353770446|gb|EHD50959.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 6901-05]
gi|353776596|gb|EHD57071.1| lysyl-tRNA synthetase [Streptococcus pneumoniae NP070]
gi|353787499|gb|EHD67901.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 5787-06]
gi|353790276|gb|EHD70659.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 6963-05]
gi|353803175|gb|EHD83467.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA07643]
gi|353825220|gb|EHE05386.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17227]
gi|353839771|gb|EHE19845.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41277]
gi|353853309|gb|EHE33292.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47360]
gi|353890318|gb|EHE70083.1| lysyl-tRNA synthetase [Streptococcus pneumoniae EU-NP01]
gi|379539226|gb|EHZ04405.1| lysine--tRNA ligase [Streptococcus pneumoniae GA04175]
gi|379540558|gb|EHZ05730.1| lysine--tRNA ligase [Streptococcus pneumoniae GA05245]
gi|379561444|gb|EHZ26461.1| lysine--tRNA ligase [Streptococcus pneumoniae GA14688]
gi|379566763|gb|EHZ31750.1| lysine--tRNA ligase [Streptococcus pneumoniae GA18068]
gi|379568185|gb|EHZ33167.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17457]
gi|379577502|gb|EHZ42421.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40183]
gi|379580535|gb|EHZ45425.1| lysine--tRNA ligase [Streptococcus pneumoniae GA40410]
gi|379589126|gb|EHZ53966.1| lysine--tRNA ligase [Streptococcus pneumoniae GA44128]
gi|395610027|gb|EJG70108.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2081074]
gi|395615121|gb|EJG75138.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2082170]
gi|395870790|gb|EJG81903.1| lysine--tRNA ligase [Streptococcus pneumoniae SPAR48]
gi|395884053|gb|EJG95095.1| lysine--tRNA ligase [Streptococcus pneumoniae GA04672]
gi|406369106|gb|AFS42796.1| lysine--tRNA ligase [Streptococcus pneumoniae gamPNI0373]
gi|444250660|gb|ELU57138.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS125219]
gi|444256626|gb|ELU62964.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS70012]
gi|444261271|gb|ELU67575.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0002]
gi|444262386|gb|ELU68684.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0006]
gi|444264378|gb|ELU70461.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0008]
gi|444265272|gb|ELU71290.1| lysine--tRNA ligase [Streptococcus pneumoniae PCS81218]
gi|444266618|gb|ELU72561.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0007]
gi|444269122|gb|ELU74937.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0010]
gi|444276656|gb|ELU82201.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0009]
gi|444281495|gb|ELU86812.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0199]
gi|444282177|gb|ELU87457.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0360]
gi|444287462|gb|ELU92389.1| lysine--tRNA ligase [Streptococcus pneumoniae PNI0427]
Length = 496
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|256844836|ref|ZP_05550294.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|294785883|ref|ZP_06751171.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|256718395|gb|EEU31950.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|294487597|gb|EFG34959.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 493
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/520 (45%), Positives = 330/520 (63%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDK---QIMIGDILKH------KPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV D F KR KIV
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTKIV 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
IRK ++ GF+EVETP++ GGA A+PF+T+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVKLSL-KNFARVHMVDMIKEVTGVDF---------WKEMTFEEAKQIAKEHHIEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV + A E +D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFESQVEEAMHGNEEATPE-------------------IDESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP G+G+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|419765990|ref|ZP_14292210.1| lysine--tRNA ligase [Streptococcus mitis SK579]
gi|383354542|gb|EID32102.1| lysine--tRNA ligase [Streptococcus mitis SK579]
Length = 496
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDF---WKDMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|167751088|ref|ZP_02423215.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
gi|167656006|gb|EDS00136.1| lysine--tRNA ligase [Eubacterium siraeum DSM 15702]
Length = 503
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/515 (46%), Positives = 336/515 (65%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+RI+K+ +L++ G PY K+D TH A Q+++ + L E V +AGR+ +
Sbjct: 26 IRIEKLNDLKANGKNPYEITKFDFTHKAQQIRDNFEEL--------EEKDVMIAGRITSW 77
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F+ +RDDSG +Q+Y + + D F + K + D+GDI+GVSG + +T +GE+S
Sbjct: 78 RDMGKANFIDIRDDSGRMQVYVRIDDIGEDNFKEFKKW-DLGDIVGVSGFVFKTRRGEIS 136
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V S +L+KSLLPLP+K+HGL D ++RYR+RY+D+I+ PE+ D F KR+ I+ EIR
Sbjct: 137 VHAKSIKLLSKSLLPLPEKWHGLKDKEERYRKRYLDLIANPEIKDTFVKRSMILREIRSF 196
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++S G++EV+TPVL GA ARPFVT+HN+L D+YLRI TEL+LKR+++GGF+++YE
Sbjct: 197 LDSKGYLEVDTPVLHTLEIGAAARPFVTHHNALDIDMYLRIETELYLKRLIVGGFDRVYE 256
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GRIFRNEG+ HNPEFT+IEMY+AY+DY MM++ EE+ AL V G T+ YQG E
Sbjct: 257 VGRIFRNEGMDATHNPEFTSIEMYQAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGKE 316
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK-VAKETTLRALGDGLENKDKFVIESSPS 422
I + +PW+R TM VKE TG+D++ +D VA+ T A I + +
Sbjct: 317 IEIGKPWKRMTMKEAVKEYTGLDYDSWTSDADAVAQAKTKHA-----------EIADTAT 365
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G +L E+FE VE KL+QPT + DYP+E SPLAK TERFE FI E NAF
Sbjct: 366 KGEVLIELFEEFVEEKLIQPTIIYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAF 425
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R +QV + ++ A A +D+DF+TALEY
Sbjct: 426 SELNDPIDQRERFTKQVMEKRKQGANA---------------------QIDEDFLTALEY 464
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DR VMLLT+SASIRDV+ FP +K
Sbjct: 465 GLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTMK 499
>gi|15672355|ref|NP_266529.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|385829942|ref|YP_005867755.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
gi|38258400|sp|Q9CII7.1|SYK_LACLA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|12723244|gb|AAK04471.1|AE006274_5 lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|326405950|gb|ADZ63021.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
Length = 494
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/519 (45%), Positives = 327/519 (63%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+E LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMENLREAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG E
Sbjct: 186 IRRYMDGRGYLEVETPVLNNEAGGAAARPFYTHHNSLDIDMALRIATELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR+FRNEG+ HNPEFTT+E YEAY+D++ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|331089813|ref|ZP_08338706.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330403510|gb|EGG83068.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 642
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/524 (44%), Positives = 337/524 (64%), Gaps = 40/524 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
D +R +R +K+ EL+ G +P+ K+D+TH + +++E Y L E VS
Sbjct: 11 QDLNQLRKVRREKLAELQGSGKDPFVITKYDQTHHSVEVKENYEEL--------EGKQVS 62
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGR++++R GK +F ++D G IQ Y ++ + + + + K +D+GD++G+ G +
Sbjct: 63 IAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKK-LDVGDVIGIEGEVF 121
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
+T+ GE+S+ + +L+KSL LP+K+HGLT+ D RYRQRYVD+I PE D F KR+K
Sbjct: 122 KTKTGEISIHASHVTLLSKSLQILPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSK 181
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I+S IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L DL LRI+ EL+LKR+++
Sbjct: 182 IISAIRRYLDGEGFMEVETPMLVANAGGAAARPFETHFNALNEDLKLRISLELYLKRLIV 241
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 242 GGLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTT 301
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I Y GVE+ L +P+ R TM + VK+ G+D+NE +K +E R L D + +
Sbjct: 302 KIVYNGVEMDLGKPFERITMVDAVKKYAGVDWNE----VKTLEEA--RKLADEHHVEYEE 355
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+ G++L+ FE E L+QPTFV+D+PIEISPL K + TERFE F+ G
Sbjct: 356 HHKK----GDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNG 411
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
EMANA+SEL DP+DQR R + Q +E L + D+ + T D+D
Sbjct: 412 WEMANAYSELNDPIDQRERFKAQ------------------EELLAQGDEEAN--TTDED 451
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
F+ ALE GMPP G+G GIDR+ MLLT+SA+IRDV+ FP +K Q
Sbjct: 452 FLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKTQ 495
>gi|255964979|ref|NP_345214.3| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|14972186|gb|AAK74854.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
Length = 491
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 10 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 69 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 128 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 188 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 248 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 308 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 359 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 419 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 457
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 458 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 491
>gi|374307802|ref|YP_005054233.1| lysine--tRNA ligase [Filifactor alocis ATCC 35896]
gi|291166187|gb|EFE28233.1| lysine--tRNA ligase [Filifactor alocis ATCC 35896]
Length = 508
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/538 (43%), Positives = 346/538 (64%), Gaps = 48/538 (8%)
Query: 45 RNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLAN 103
R R + T E + +R++K+ +L+ KG +P+ K+D TH + + + + L
Sbjct: 2 RGREHTMEQNQTPMSEFTK-IRLEKLIQLQEKGRDPFVNEKFDYTHHSVDIIDKFEEL-- 58
Query: 104 GEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVD 163
E VS+AGR++ R GK +FLT++D G IQ+Y ++ + + + K + D
Sbjct: 59 ------EEKDVSIAGRIMLIRGHGKASFLTIQDSEGRIQVYVRQDVVGEESYTDFKTY-D 111
Query: 164 IGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISK 223
IGDI+GV+G++ RT KGE++V +LTKSL PLPDK+ GL D D RYRQRYVD+I
Sbjct: 112 IGDIIGVTGTVFRTHKGEITVKAKEVTLLTKSLHPLPDKHAGLKDPDLRYRQRYVDLIVN 171
Query: 224 PEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLR 283
PEV + F KR+K + +++ +++ GF+EV+TP+L AGGA ARPF T+HN+L ++Y+R
Sbjct: 172 PEVKESFIKRSKAIKALKEYLDNRGFLEVDTPILSTIAGGANARPFKTHHNTLNLEMYMR 231
Query: 284 IATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEI 343
IA EL+LKR+++GGFEK+YE+GR+FRNEG+ HNPE+T IE+Y+AY DY+ +M +TE I
Sbjct: 232 IANELYLKRLIVGGFEKVYEMGRMFRNEGMDINHNPEYTAIEIYQAYVDYEEIMRLTEGI 291
Query: 344 VTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKET 400
V++ A G + +DYQG EI PWRR +M + VKE G+DFN++ D + +AKE
Sbjct: 292 VSYMAEKSTGSMVVDYQGTEIDFTPPWRRISMIDAVKEYVGVDFNKIDTDEEAIAIAKEK 351
Query: 401 TLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHR 460
G+E + ++ + G++++ FE E +VQPTFV +P+EISPL+K
Sbjct: 352 -------GIE-----LTPATMTRGHIISLFFEEFCEEHMVQPTFVTGHPVEISPLSKRDP 399
Query: 461 RHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKL 520
LT RFE F E+ANAFSEL DP+DQR R E+Q+RQ
Sbjct: 400 LDTRLTHRFEAFANRWEIANAFSELNDPVDQRQRFEDQMRQ------------------- 440
Query: 521 KE-SDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
KE DD ++E +D+DF+ A+E G+PP G+G+G+DR++MLLTN++SIRDVI FP +K
Sbjct: 441 KELGDDEAHE--MDEDFLNAIEVGLPPTGGLGIGVDRVIMLLTNASSIRDVILFPTMK 496
>gi|160944697|ref|ZP_02091924.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
M21/2]
gi|158443881|gb|EDP20885.1| lysine--tRNA ligase [Faecalibacterium prausnitzii M21/2]
gi|295104347|emb|CBL01891.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
SL3/3]
Length = 503
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/533 (44%), Positives = 336/533 (63%), Gaps = 38/533 (7%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANG 104
+R ++ S S++ VR +K+ +L++ G +P+ K+ + + L+E ++ L N
Sbjct: 4 QKRNPAAGLSESEQVQVRR---QKLADLQAAGNDPFTLTKFPQDAYSADLKEEFKELPNE 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
+S V++AGR++++R GK +F LRDD G IQLY ++ L + + K +D+
Sbjct: 61 TDSGK---LVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGDEAYAAFKK-LDV 116
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+GV G + RT+ GELSV +L KSL PLP+K+HGLTD + RYRQRYVD+I+ P
Sbjct: 117 GDIIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIANP 176
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV D F KR++I+ EIR ++ GF+EV+TP+L GA ARPF T+HN+L D+ LRI
Sbjct: 177 EVKDTFIKRSRILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNTLNMDMVLRI 236
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
TEL+LKR+++GG +++YE+GRIFRNEG+ +HNPEFTTIE+Y+A++D+ MM++ EE+
Sbjct: 237 ETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNPEFTTIELYQAFTDFHGMMDLVEELY 296
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRA 404
AL + G L I YQG +I + W R TM VK+ +G+DF ND + + A
Sbjct: 297 KRLALKICGSLVIPYQGKQIDMSH-WERLTMVEAVKKYSGVDF----NDWQTDADAIAAA 351
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
+E + P+ G +L E F+ VE KL+QPTF+ DYP+EISPLAK
Sbjct: 352 KAHNVE------LPEVPTKGAILAEFFDAFVEDKLIQPTFIYDYPVEISPLAKRKPDDPA 405
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
TERFE FI E NAFSEL DP+DQ+ R E QV + A+ + AQ
Sbjct: 406 FTERFEYFIDCTEYGNAFSELNDPIDQKGRFERQVAERK-----ALEPECKAQ------- 453
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYG+PP G+G G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 454 -------VDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFPTMK 499
>gi|304436292|ref|ZP_07396270.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370697|gb|EFM24344.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 501
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/527 (45%), Positives = 337/527 (63%), Gaps = 35/527 (6%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+S D + +R +K++ RS G+ P+ ++++ T A L++ Y HLA EE
Sbjct: 6 ASVAQEQDLNEMMRVRREKMDAFRSMGIAPFGHRYEVTDYAENLKKEYDHLAEDEEGKE- 64
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
V +AGR++A R GK +F TL D +G IQ+Y + + L ++ + +DIGDI+G+
Sbjct: 65 ---VRIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDIGDIIGI 121
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + +T +GE++V V F +L K+L PLP+K+HGL DVD RYRQRY+D++ EV + F
Sbjct: 122 RGVVFKTRRGEVTVRVEDFDLLAKALRPLPEKFHGLKDVDTRYRQRYLDLMVNQEVRETF 181
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
RKR I+ IR+ +++ F+EVETPVL AGGA ARPFVT+HN+L DLYLRIATEL L
Sbjct: 182 RKRTAILQSIRRYLDARDFLEVETPVLSTLAGGAAARPFVTHHNALDIDLYLRIATELSL 241
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG +++YE+GR+FRNEG+ RHNPEFT+IE+Y+A++D++ +M ITE IV A
Sbjct: 242 KRLIVGGLDRVYEMGRVFRNEGMDVRHNPEFTSIEIYQAFADHRDLMAITEGIVRQAAED 301
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G I YQGVEI LE+ R +M++ V+EATG DF L RA+ +
Sbjct: 302 VLGTTKITYQGVEIDLEQ-VRTISMNDAVREATGKDF------LSCRTVDEARAMAREIH 354
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
E +G +LN FE VE L+QPTF+ +P EISPLAK + +T+RFE
Sbjct: 355 ----VPFEERHGIGGILNAAFEEKVEESLMQPTFITGHPTEISPLAKRNADDPRITDRFE 410
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
FI GRE+AN F+EL DP+DQ R +Q+ AQ + +++ H
Sbjct: 411 FFIYGRELANGFTELNDPIDQEQRFLDQL----------------AQREAGDAEAH---- 450
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+VTALEYG+PP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 451 VMDHDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 497
>gi|418134446|ref|ZP_12771304.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11426]
gi|353903036|gb|EHE78562.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA11426]
Length = 496
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVIRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|95929407|ref|ZP_01312150.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95134523|gb|EAT16179.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 494
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/517 (46%), Positives = 339/517 (65%), Gaps = 38/517 (7%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A R+ K ++LR +G PYA + +H Q+ + E ++V +AGR++AR
Sbjct: 9 AQRMAKADDLREQGTNPYANGFVVSHQNAQIHAAHVEDDAAALEGCEQEYV-IAGRIMAR 67
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGE 181
R FGK AF+ ++D +G +Q+Y K ++ +QF VF +D+GDI+G+SG RT+ E
Sbjct: 68 RDFGKAAFIQVQDRTGRLQIYVGKNKIGDEQF---AVFGKLDVGDIVGISGKPFRTKTDE 124
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LS+ S +LTKSL PLP+K+HGLTDV+ RYRQRY+D+I PEV DVF+KR++I+S +R
Sbjct: 125 LSLRAESLTLLTKSLQPLPEKWHGLTDVETRYRQRYLDLIVNPEVGDVFKKRSQIISLMR 184
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
++ ++EVETP++Q AGGA A+PFVT+HN+L DL+LRIA EL+LKR+++GGFE++
Sbjct: 185 AFMQERDYLEVETPMMQPVAGGATAKPFVTHHNTLKMDLFLRIAPELYLKRLVVGGFERV 244
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
+EI R FRNEG+S +HNPEFT +E Y+AY+ Y +M++TEE++ A V G I Y G
Sbjct: 245 FEINRNFRNEGISIQHNPEFTMMEFYQAYATYHDLMDMTEEMIGSIAEKVCGSRVISYGG 304
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELG-NDLKVAKETTLRALGDGLENKDKFVIESS 420
++ L PW R T VKEA + + ++ DL+ + A GLE E +
Sbjct: 305 KDVDLTAPWDRLT----VKEAI-VKYGDISLEDLEDPDKALAYANSIGLE------FEGT 353
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G LL E+F+ V EPKL PTFV +YP E+SPL++ + + +RFELF+ GRE+AN
Sbjct: 354 IGYGKLLTELFDEVAEPKLWNPTFVTEYPTEVSPLSRRNDERPEVVDRFELFVVGRELAN 413
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R E+Q+ EK A DD ++ +D+D++ AL
Sbjct: 414 AFSELNDPVDQKGRFEQQLV---EKEAG---------------DDEAH--AMDEDYIRAL 453
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYG+PP +G G+GIDRLVMLLT+SASIRDVI FP L+
Sbjct: 454 EYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFPQLR 490
>gi|269217201|ref|ZP_06161055.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
gi|269129338|gb|EEZ60423.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
Length = 509
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 327/515 (63%), Gaps = 38/515 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K L + G PY +++ +H A L+E Y L +G S D V V+GR++A R
Sbjct: 27 VRRNKRAALIAAGKNPYGSRFEYSHHARDLEEAYADLEDGA---STEDVVKVSGRIMAIR 83
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+AF+ +RD +G IQL+C L + +D +K +D+GD +G G++ RT +G+LSV
Sbjct: 84 NQGKIAFIVIRDLTGDIQLFCRVNILGEEAYDDVKD-LDVGDWVGAEGTVIRTRRGQLSV 142
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S +L+KSL PLP+K+HGL+D + RYRQRYVD++ +V D F KR IVS IR+ +
Sbjct: 143 APTSVRLLSKSLRPLPEKFHGLSDKEIRYRQRYVDLVMNQDVRDTFVKRFAIVSAIRRYM 202
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
ES GF EVETP+LQ GGA ARPFVT+HN+L D YLRIATEL LKR+L+GG E+++EI
Sbjct: 203 ESQGFFEVETPMLQPIMGGANARPFVTHHNALDMDFYLRIATELPLKRLLVGGLERVFEI 262
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+A+SD + MM++T ++ A A G L ++YQG I
Sbjct: 263 GRIFRNEGMDPYHNPEFTTIEAYQAFSDLEGMMDLTRGMIQAAAQAACGTLQVEYQGRAI 322
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD--GLENKDKFVIESSPS 422
L W TM +L E G E+G D R+ D + + IE+S
Sbjct: 323 DLSGTWTTRTMCDLASEYAG---EEVGMD---------RSWEDLAAIARRGGASIEASWG 370
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G L++E+FE VE KLVQPTFV ++P+EISPLAK + T RFELFICG E ANAF
Sbjct: 371 KGKLISEIFEAFVEDKLVQPTFVTEHPLEISPLAKKLPDNPEFTYRFELFICGHEYANAF 430
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+EL DP+DQ R Q+ E +A DD + E D D++ ALEY
Sbjct: 431 NELNDPIDQEERFAAQM----EAKAGG--------------DDEAME--YDSDYIRALEY 470
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPPA G+G+GIDRLVMLLT+S +IRDV+ FP ++
Sbjct: 471 GMPPAGGVGVGIDRLVMLLTDSETIRDVLLFPHMR 505
>gi|333394461|ref|ZP_08476280.1| lysyl-tRNA synthetase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 507
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 332/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR++G++P+ +++R ++ Q++E Y + E+ +E V++AGR++ +R
Sbjct: 17 VRREKMDELRTEGIDPFGQRFERDATSQQIRERYADESK-EQLEAEEHIVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F D G IQ+Y K+R+ + + K D+GDI+G++G + +T+ GEL+V
Sbjct: 76 GKGKVGFADFADRDGRIQVYVRKDRVGEENYHIFKR-SDLGDIMGITGDVMKTDTGELTV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ LTK+L PLPDKYHGL +V+++YRQRY+D+I+ + D F KR+KIVS +R+ +
Sbjct: 135 RASHVTFLTKALRPLPDKYHGLQNVEQKYRQRYLDLIANRDSFDRFMKRSKIVSAVREYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ FVEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 195 DKNEFVEVETPVLHTQAGGASARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY D +M+ TE IV A VNG I YQG I
Sbjct: 255 GRVFRNEGIDTKHNPEFTMLETYAAYWDLSDVMDETEGIVRFAAQKVNGTGQITYQGQPI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L++P+ R M +L+KE TG+DF E T+ L ++ E VG
Sbjct: 315 DLDKPFARAHMVDLIKEKTGVDF---------WPEMTVEQ-AQKLADEHDVKYEKWWQVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +PIEISPLAK + +RFELFI G E ANAF+E
Sbjct: 365 HIINAFFEDFVEATLTQPTFVYGHPIEISPLAKKDPKDPRFVQRFELFIHGGEYANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+AR E Q + +E +D ++ +D+D+V ALEYGM
Sbjct: 425 LNDPIDQKARFEAQATER------------------EEGNDEAH--GIDEDYVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+ SIRDV FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTDVDSIRDVQLFPTMR 497
>gi|313679937|ref|YP_004057676.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
gi|313152652|gb|ADR36503.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
Length = 498
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/512 (46%), Positives = 329/512 (64%), Gaps = 37/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +E L G EP+ Y++++TH A Q+ E H E + V VAGR+V+ R
Sbjct: 11 RLANLEALVEAGFEPFPYRYEKTHDAAQILEA--HAGAAPEQAWPEERVRVAGRLVSLRR 68
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L D+SG IQLY ++ ++Q+ LK +DIGDI+G G++ T+ GE++V
Sbjct: 69 MGKVTFAHLLDESGRIQLYLSRD--ATEQYRLLKK-LDIGDIVGAEGTVFTTKTGEVTVA 125
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + L K+L PLPDK+HG+ D + RYRQRY+D+I PEV DVFR RA++V IR+ +E
Sbjct: 126 VERWQPLVKALRPLPDKWHGIKDKEVRYRQRYLDLIVNPEVRDVFRTRARVVRHIRRFLE 185
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETPV+ AGG EARPF T+HN+L + LRI+ EL LK++L+GGFEK++E+G
Sbjct: 186 ERGFLEVETPVILPTAGGTEARPFKTFHNALAHEFELRISLELPLKKLLVGGFEKVFELG 245
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ +HNPEFT +E Y AY+DYQ M +TE +++ + G T+ YQG I
Sbjct: 246 RVFRNEGIDAQHNPEFTMLEAYWAYADYQDMAEMTEAMLSSLVQELTGGYTLAYQGRTID 305
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
P+RR + +++E G+DF+ L D LR D K +IE PS
Sbjct: 306 FTPPFRRLSFVEVLREKAGLDFDPLDLD-------RLRIWADA---KHPELIE-VPSY-K 353
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LL+++FE+ VE +L PTFV D+P ISPLAK HR GLTER++LF+ G E+A A+SEL
Sbjct: 354 LLDKLFELYVEEELHDPTFVFDFPAVISPLAKKHREREGLTERWDLFVAGMELAPAYSEL 413
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DPLDQR R EEQ R+ + D+ ++ V D+DF+TALE+GMP
Sbjct: 414 NDPLDQRERFEEQARRR------------------EGGDEEAHRV--DEDFLTALEHGMP 453
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA GMGLGIDRL M+L + SIRDVI FP+L+
Sbjct: 454 PAGGMGLGIDRLTMILADQPSIRDVILFPLLR 485
>gi|237741501|ref|ZP_04571982.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|229429149|gb|EEO39361.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
Length = 493
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/520 (44%), Positives = 330/520 (63%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDK---QIMIGDILKH------KPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV D F KR KI+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTKII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
IRK ++ GF+EVETP++ GGA A+PF+T+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVKLSL-KNFARVHMVDMIKEVTGVDF---------WKEMTFEEAKQIAKEHHIEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV + A E +D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFESQVEEAMHGNEEATPE-------------------IDESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP G+G+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|299820637|ref|ZP_07052526.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
gi|299817658|gb|EFI84893.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
Length = 498
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 328/513 (63%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ LR +G++P+ K+ R+ S +++E Y+ EE VSVAGR++ +R
Sbjct: 15 VRREKVDTLRQEGIDPFGEKFVRSISPEEIEEQYKD-KTKEELEEAAVEVSVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDNVGEDAYAVFKL-ADLGDIIGIKGTVFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E F R+KI+ IR+ +
Sbjct: 133 KAEAFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNDESQKRFVMRSKILRYIREYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETPVL GGA A+PF+T+HN+L DLYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DKEDYLEVETPVLHTIPGGAAAKPFITHHNALDMDLYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT +E Y A+ +Y+ +M + E +V + + ++G I Y E+
Sbjct: 253 GRVFRNEGISTRHNPEFTMLESYAAFENYEDVMELVEGLVAYVSEKLHGTTKIQYGEYEV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + D + L + I + G
Sbjct: 313 DLTPKWRRLHMADAVKEYAGVDFWTVKTDEEAK----------ALAKEHNVAITEHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ + A S +D+DF+ +LEYG+
Sbjct: 423 LNDPIDQRQRFEGQVKEREQGNDEAHS--------------------MDEDFLESLEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMK 495
>gi|374672446|dbj|BAL50337.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis IO-1]
Length = 484
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/519 (45%), Positives = 325/519 (62%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+E LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 3 VRREKMENLREAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 56
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 57 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 115
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E D F R+KI+SE
Sbjct: 116 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFDRFVTRSKIISE 175
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR ++ GF+EVETP+L AGGA ARPF T+HN+L D+ LRIA ELHLKR+++GG E
Sbjct: 176 IRHYMDGRGFLEVETPILHSEAGGAAARPFFTHHNTLDIDMALRIALELHLKRLIVGGME 235
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIGR+FRNEG+ T HNPEFT +E YEAY+D+ +M++TE I H A V G+ ++Y
Sbjct: 236 KVYEIGRVFRNEGMDTTHNPEFTMLESYEAYADFHDVMDLTEGIFQHVAKTVVGQDVLEY 295
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE +G+DF E T + D V +
Sbjct: 296 DGKEINVGGKFKRVHMVDAIKEVSGVDF---------WPEMTFEEATALAKEHDIHVEKH 346
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 347 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 406
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 407 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 445
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 446 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 484
>gi|300857281|ref|YP_003782265.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437396|gb|ADK17163.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 503
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 330/516 (63%), Gaps = 37/516 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R++K E+L+ G +P+ YK +RTH++ ++++ Y L E V+VAGR++++R
Sbjct: 22 RLQKFEDLKEAGKDPFDVYKVERTHTSKEVKDNYDTL--------EGKDVTVAGRLISKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L D G IQLY + ++ + K + DIGDIL V+G + +T+ E+S+
Sbjct: 74 VHGKAGFSDLYDRYGKIQLYIRINDVGEEKLKEYKSY-DIGDILSVTGRVFKTKTEEISI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ IR+ +
Sbjct: 133 HITDFELVAKSLKPLPEKWHGLKDPDLRYRQRYVDLIINSDVRDTFLKRTAIIKSIREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ ++EVETP+L AGGA A+PF T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNKDYIEVETPILSSIAGGAAAKPFTTHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPE+T+IE+YEA++DY MM ITE ++ + V G + Y+ EI
Sbjct: 253 GKCFRNEGMDIRHNPEYTSIELYEAFADYNDMMEITENMIAYVCEKVLGTTKVVYEDTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PW R TM VK+ +DF+E+ +D +E A G +E K + S G
Sbjct: 313 DFKPPWNRITMVEAVKKFANVDFDEVKDD----EEAREIAKGKHIELKKEL---KDCSKG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++L+ +FE E K +QPTFV+DYP+EISPL K R + TERFE FI GRE+ NA+SE
Sbjct: 366 DILDAMFEEFCEEKFIQPTFVMDYPVEISPLTKKKRGNPKFTERFEGFIFGREICNAYSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ QR R +Q+++ + DD +Y +D+DF+ ALE GM
Sbjct: 426 LNDPIVQRERFMQQLKER------------------ELGDDEAY--MMDEDFLNALEIGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+G+DRLVM LTN+ SIRDVI FP +K Q
Sbjct: 466 PPTGGLGIGVDRLVMFLTNATSIRDVILFPTMKPNQ 501
>gi|392428469|ref|YP_006469480.1| lysyl-tRNA synthetase [Streptococcus intermedius JTH08]
gi|419777442|ref|ZP_14303354.1| lysine--tRNA ligase [Streptococcus intermedius SK54]
gi|383844922|gb|EID82332.1| lysine--tRNA ligase [Streptococcus intermedius SK54]
gi|391757615|dbj|BAM23232.1| lysyl-tRNA synthetase [Streptococcus intermedius JTH08]
Length = 495
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/514 (45%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMTALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF KE TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKEMTLEE-ATALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|34763426|ref|ZP_00144374.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886895|gb|EAA24019.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 493
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/520 (44%), Positives = 330/520 (63%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDK---QIMIGDILKH------KPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV D F KR KI+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTKII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
IRK ++ GF+EVETP++ GGA A+PF+T+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCKEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVKLSL-KNFARVHMVDMIKEVTGVDF---------WKEMTFEEAKQIAKEHHIEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV + A E +D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFESQVEEAMHGNEEATPE-------------------IDESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP G+G+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|322389927|ref|ZP_08063467.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
gi|321143363|gb|EFX38801.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/514 (45%), Positives = 333/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ QL+E Y L + E+ + N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSGQLKEKYSEL-DKEQLHDLNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E +YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMECVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +M++TE I+ H A AV+G IDYQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + D+ + L N+ +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAV-------ALANEKHVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GQIINAFFEEFVEETLTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ R E Q R A+E DD + +D D+V ALEYG
Sbjct: 423 ELNDPIDQLQRFEAQAR---------------AKEL---GDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLTN +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTNVTTIRDVLLFPTMK 496
>gi|293365298|ref|ZP_06612015.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
gi|307703838|ref|ZP_07640779.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
gi|417933716|ref|ZP_12577036.1| lysine--tRNA ligase [Streptococcus mitis bv. 2 str. F0392]
gi|419778940|ref|ZP_14304821.1| lysine--tRNA ligase [Streptococcus oralis SK10]
gi|291316748|gb|EFE57184.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
gi|307622673|gb|EFO01669.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
gi|340770286|gb|EGR92801.1| lysine--tRNA ligase [Streptococcus mitis bv. 2 str. F0392]
gi|383186704|gb|EIC79169.1| lysine--tRNA ligase [Streptococcus oralis SK10]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|418148148|ref|ZP_12784913.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13856]
gi|353812823|gb|EHD93056.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13856]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 339/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y ++ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRRDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|377809054|ref|YP_005004275.1| lysine--tRNA ligase [Pediococcus claussenii ATCC BAA-344]
gi|361055795|gb|AEV94599.1| lysine--tRNA ligase [Pediococcus claussenii ATCC BAA-344]
Length = 499
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/514 (45%), Positives = 340/514 (66%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-SVAGRVVAR 123
+R +K++ELR KG++P+ ++++RT+ A L + + L G+E+ E + V ++AGR++++
Sbjct: 16 VRREKMDELREKGIDPFGHRFERTYLAGDLHKEFGDL--GKEALEEKNIVATIAGRMMSK 73
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+AF ++D SG IQLY K+ + DQ++ K DIGD G++G + +T+ GEL+
Sbjct: 74 RRKGKVAFADIKDRSGKIQLYVRKDEVGEDQYEIFKR-SDIGDFFGITGEVMKTDMGELT 132
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V LTK+L PLP+K+HGL +V++ YRQRY+D+IS + D F+KR+KIVS +R+
Sbjct: 133 IKVTELTFLTKALRPLPEKFHGLQNVEQIYRQRYLDLISNDDSMDRFKKRSKIVSAVRRY 192
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
++ GF EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YE
Sbjct: 193 LDGDGFTEVETPVLHTQAGGANARPFITHHNALDIDLYLRIALELHLKRLIVGGMERVYE 252
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I AV+ I YQG E
Sbjct: 253 IGRVFRNEGIDTRHNPEFTMLESYAAYYDFHDVMDETEGIFKAAVKAVSDDGKITYQGTE 312
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L + + R M + +K+ TGIDF + ++ AK+ L + + E+ +V
Sbjct: 313 LDLGQEFGRMHMVDAIKKFTGIDFWAPMS-IEDAKK---------LADDNGIHYETWWTV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE V+ +L QP F+ +P+EISPLAK + T+RFEL+I G E NAF+
Sbjct: 363 GHIINEFFEEKVQDQLEQPVFIYGHPVEISPLAKKNADDPRFTDRFELYILGNEYGNAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E QV + R A E +D+D+V ALEYG
Sbjct: 423 ELNDPIDQRARFEAQVAE----RKAGNDEAEG----------------IDEDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 496
>gi|417916245|ref|ZP_12559835.1| lysine--tRNA ligase [Streptococcus mitis bv. 2 str. SK95]
gi|342831127|gb|EGU65451.1| lysine--tRNA ligase [Streptococcus mitis bv. 2 str. SK95]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L+E + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKEKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEYVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|325662822|ref|ZP_08151391.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470874|gb|EGC74103.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 649
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/530 (44%), Positives = 335/530 (63%), Gaps = 40/530 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEES 107
A D +R +R +K+ +L++ G +P+ K+D TH + +++ + +
Sbjct: 2 AEQKKVQEQDVNQLRQVRREKLADLQASGNDPFVITKYDVTHHSMDIKDHFEEM------ 55
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
E V++AGR++++R GK +F ++D G IQ Y ++ + + + K +DIGDI
Sbjct: 56 --EGKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKAFKK-MDIGDI 112
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + RT+ GE+S+ +L+KSL LP+K+HGLT+ D RYRQRYVD+I P+V
Sbjct: 113 VGIKGDVFRTKMGEISIHAQEVTLLSKSLQILPEKFHGLTNTDLRYRQRYVDLIMNPDVK 172
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F KR+KI+S IRK ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ E
Sbjct: 173 DTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAAARPFETHFNALNEDFKLRISLE 232
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L+LKR+++GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE +
Sbjct: 233 LYLKRLIVGGMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRFV 292
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I Y GVE+ L +P+ R TM + VK+ TGID+NE+ TTL+
Sbjct: 293 AQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKYTGIDWNEV---------TTLKE-AR 342
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
L + K E G++L+ FE VE L+QPTFV+D+PIEISPL K + TE
Sbjct: 343 RLAKEHKVEFEERHKKGDILSLFFEAFVEEHLIQPTFVMDHPIEISPLTKKKPENPEYTE 402
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ G EMANA+SEL DP+DQRAR + Q +E L + D+ +
Sbjct: 403 RFEFFMNGWEMANAYSELNDPIDQRARFKAQ------------------EELLAQGDEEA 444
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
T D+DF+ ALE GMPP G+G GIDR+ MLLT+SA+IRDV+ FP +K
Sbjct: 445 N--TTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMK 492
>gi|418966867|ref|ZP_13518574.1| lysine--tRNA ligase [Streptococcus mitis SK616]
gi|383346312|gb|EID24372.1| lysine--tRNA ligase [Streptococcus mitis SK616]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|225572779|ref|ZP_03781534.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
10507]
gi|225039836|gb|EEG50082.1| lysine--tRNA ligase [Blautia hydrogenotrophica DSM 10507]
Length = 651
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/534 (44%), Positives = 334/534 (62%), Gaps = 40/534 (7%)
Query: 47 RRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGE 105
+R + D + +R +K+ +L++ G P+ K+D TH + ++E ++ L
Sbjct: 2 KRVAGQKKQEQDINQLLKVRREKLADLQANGKNPFEIMKYDVTHHSEDIREQFQEL---- 57
Query: 106 ESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIG 165
E VSVAGR++++R GK +F ++D G IQ Y ++ L + + + K +D+G
Sbjct: 58 ----EGKTVSVAGRMMSKRVMGKASFCHVQDLRGQIQSYVARDSLGEEAYKEFKK-MDVG 112
Query: 166 DILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPE 225
DI+G+ G + RT+ GE+S+ +L+KSL LP+KYHGLT+ D RYRQRY D+I PE
Sbjct: 113 DIVGIKGEVFRTKTGEISIHAAEVTLLSKSLQVLPEKYHGLTNTDLRYRQRYTDLIMNPE 172
Query: 226 VADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIA 285
V D F KR+KI+S IRK +++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+
Sbjct: 173 VKDTFIKRSKIISSIRKYLDAQGFMEVETPMLVANAGGAAARPFETHFNALDEDFKLRIS 232
Query: 286 TELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVT 345
EL+LKR+++GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE +
Sbjct: 233 LELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYR 292
Query: 346 HCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRAL 405
H A V G I Y G+E+ L +P+ R TM + VK+ +G+DFNE+ + LK A+
Sbjct: 293 HVAQEVLGTTKITYNGIEMDLGKPFERITMVDAVKKYSGVDFNEI-HTLKEAR------- 344
Query: 406 GDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGL 465
+ + E G++L+ FE E L+QPTFV+D+PIEISPL K +
Sbjct: 345 --AVAKEHHVEYEERHKKGDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEY 402
Query: 466 TERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDD 525
TERFE F+ G EMANA+SEL DP+DQR R AQE+L D
Sbjct: 403 TERFEFFMNGWEMANAYSELNDPIDQRERF-------------------LAQEELLAQGD 443
Query: 526 HSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
T D+DF+ ALE GMPP G+G GIDR+ MLLTNSA+IRDV+ FP +K Q
Sbjct: 444 EEANHT-DEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFPTMKSQ 496
>gi|374340761|ref|YP_005097497.1| lysyl-tRNA synthetase [Marinitoga piezophila KA3]
gi|372102295|gb|AEX86199.1| lysyl-tRNA synthetase (class II) [Marinitoga piezophila KA3]
Length = 499
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 339/516 (65%), Gaps = 35/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
VR R++ +EE+R +G PY Y++D+ +++E Y ++ +GE E + AGRV+
Sbjct: 4 VRKQRLELIEEIRKEGKNPYPYRFDKEMKVEEIKEKYGNIESGE--LKEEEVFKFAGRVM 61
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
+ R GK AFL L+DD+G IQ Y K+++ ++F++ K ++DIGD +GV G +T GE
Sbjct: 62 SIRKHGKSAFLVLKDDTGRIQAYIRKDKVGEEKFNEFKKYMDIGDWVGVEGFPFKTHTGE 121
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L++LV F IL+K+L PLP+K+HGL D + RYRQRYVDMI+ E F R K + IR
Sbjct: 122 LTILVLDFEILSKALRPLPEKWHGLKDREVRYRQRYVDMIANDESLKTFVTRFKAIRYIR 181
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ + S GF EVETP L GGA ARPFVT+ N D+YLRIA EL+LKR+++GG EKI
Sbjct: 182 EFLYSKGFTEVETPTLHPILGGANARPFVTHLNVYDVDMYLRIAPELYLKRLVVGGMEKI 241
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
+EIG+ FRNEG+S +HNPEFT +E+Y+AY+DY MM ITEE++++ ++G I Y G
Sbjct: 242 FEIGKNFRNEGVSYKHNPEFTMMELYQAYADYTDMMRITEEVLSYVVEKIHGTTKIVYDG 301
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
VEI + P++R M + +KE G+D E D K+++ L+ G +E +DK
Sbjct: 302 VEIDFKPPFKRVKMRDFIKEHLGVDILE-DPDEKLSQ--VLKDHGVEVEFEDK------- 351
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ ++E++ + VE K+VQPTFVL++P+EISPLAK HR +TERFEL I GRE+ANA
Sbjct: 352 --AHYIDELWSL-VEDKIVQPTFVLEHPVEISPLAKRHREDPRVTERFELIIYGRELANA 408
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQ R ++QV ++KE D ++ +D DF+ ALE
Sbjct: 409 FSELNDPVDQLQRFKKQV-------------------EMKEKGDEEAQM-MDLDFIRALE 448
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YG+PP G+G+GIDR +M LT + +IRDVI +PI++
Sbjct: 449 YGLPPTGGLGIGIDRFIMFLTGAETIRDVIPYPIVR 484
>gi|417935565|ref|ZP_12578882.1| lysine--tRNA ligase [Streptococcus infantis X]
gi|343402474|gb|EGV14979.1| lysine--tRNA ligase [Streptococcus infantis X]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHVAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|331266480|ref|YP_004326110.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
gi|326683152|emb|CBZ00770.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHDLNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|315652679|ref|ZP_07905654.1| lysine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485057|gb|EFU75464.1| lysine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/529 (44%), Positives = 341/529 (64%), Gaps = 40/529 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESN 108
S+ ++ D + R K+ EL+ G +P+ K+D + +++ + L
Sbjct: 4 SNEPMTSEDLNHILKARRDKLSELQQTGNDPFFITKYDVDKHSTDIKDNFEKL------- 56
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V++AGR++++R GK +F ++D +G IQ Y ++ + D++ K +DIGDI+
Sbjct: 57 -DGKSVNIAGRLMSKRVMGKASFCHVQDLTGKIQAYVARDSVGEDEYKAFKK-LDIGDIV 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV+G++ +T+ GE+S+ V+L+KSL PLP+K+HGLTD D RYRQRYVD+I +V D
Sbjct: 115 GVTGTVFKTQTGEISIHATDVVLLSKSLKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKD 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR++I++EIRK ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL
Sbjct: 175 TFVKRSRIITEIRKFLDGQGFIEVETPMLVSNAGGAAARPFNTHYNALDEDVKLRISLEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + + A
Sbjct: 235 YLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRYLA 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y I L +P+ R TM +K+ +G+DF+++ ETT A
Sbjct: 295 QTVCGSTTIPYAEAMIDLGKPFERTTMVEAIKKYSGVDFDKV--------ETTKEAKALA 346
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
E K +F E + G+++N FE VE KL+QPTFV+D+PIE+SPL K ER
Sbjct: 347 KEKKIEF--EERHTRGDIINLFFEEFVEEKLIQPTFVMDHPIEVSPLTKKKPGDPRYVER 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANA+SEL DP+DQR R + Q E AA E++ +H+
Sbjct: 405 FELFIYGREMANAYSELNDPIDQRERFKAQ-----EAAFAAGDEEA----------NHT- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP LK
Sbjct: 449 ----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTLK 493
>gi|414596115|ref|ZP_11445691.1| Lysyl-tRNA synthetase [Leuconostoc citreum LBAE E16]
gi|390483048|emb|CCF27752.1| Lysyl-tRNA synthetase [Leuconostoc citreum LBAE E16]
Length = 502
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/501 (46%), Positives = 328/501 (65%), Gaps = 35/501 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A +L ++Y + + E SE V +AGR++A+R GK+ F RD
Sbjct: 36 LDPFGKRFERTAKAQELHDLYDN-STLETLESEQHEVVIAGRMIAKRGAGKVIFADFRDV 94
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L + + +K D+GD LG+ G + +TE GEL+VL LTK+L
Sbjct: 95 SGKIQVYAKRDDL-GENYPIIKR-ADLGDFLGIKGIIMKTEAGELTVLATELTHLTKALR 152
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG+ DV+ RYR+RY+D+I+ E F+ R+KI+S IR ++S F+EVETP+L
Sbjct: 153 PMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETPIL 212
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GGFE++YEIGRIFRNEG+ +H
Sbjct: 213 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNEGMDPKH 272
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +M+ TE I A V+ L + YQG EI L + R+ M +
Sbjct: 273 NPEFTTMETYAAYMDFTDVMDETEGIFKAAASVVSDDLKVTYQGTEIDLGSNFARKHMVD 332
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSVGNLLNEVFEIVVE 436
L+KE TGIDF + D+ V L DK V E VG+++N FE VE
Sbjct: 333 LIKEQTGIDFWQ---DMSVEAAQKLA--------DDKHVKYEKYWGVGHIINAFFEEFVE 381
Query: 437 PKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLE 496
LVQPTFV +P+E+SPLAK + + T+RFELFI G E NAF+EL DP+DQRAR E
Sbjct: 382 DTLVQPTFVYGHPVEVSPLAKRNAEDSRFTDRFELFIMGSEYGNAFTELNDPIDQRARFE 441
Query: 497 EQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDR 556
Q V+E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDR
Sbjct: 442 AQ-----------VAERENGNDEAE---------NIDEDFIEALEYGMPPTGGLGIGIDR 481
Query: 557 LVMLLTNSASIRDVIAFPILK 577
LVMLLT+S +IRDV+ FP ++
Sbjct: 482 LVMLLTDSDTIRDVLLFPTMR 502
>gi|417938384|ref|ZP_12581682.1| lysine--tRNA ligase [Streptococcus infantis SK970]
gi|343391474|gb|EGV04049.1| lysine--tRNA ligase [Streptococcus infantis SK970]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALRDQGIDPFGKRFERTANSQELKDKFADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G + YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHVARAVKGDAPVIYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KLNEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|229829706|ref|ZP_04455775.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
14600]
gi|229791695|gb|EEP27809.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
14600]
Length = 648
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/521 (45%), Positives = 333/521 (63%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +KV LR G +P+ K+D+TH + ++E + L E V +
Sbjct: 9 DTNQLRKVRREKVAMLREMGRDPFVITKFDQTHHSVDIREHFEEL--------EGKEVKI 60
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++ +R GK +F +RD G +Q+Y ++ L + + K + D+GDILGV G + R
Sbjct: 61 AGRMMFKRVMGKASFANIRDLKGDMQIYVTRDDLGQEDYALFKKY-DVGDILGVVGVVFR 119
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T GE+SV + +L+KSL PLP+K+HGLTD D RYRQRYVD+I PEV D F KR++I
Sbjct: 120 TRMGEISVHASQVTLLSKSLQPLPEKFHGLTDTDTRYRQRYVDLIMNPEVKDTFVKRSQI 179
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+ EIR ++ F+EVETP+L AGGA ARPF +++N+L D+ LRI+ EL+LKR+++G
Sbjct: 180 IKEIRNFLDGRDFMEVETPMLVSNAGGAAARPFESHYNALDEDVKLRISLELYLKRLIVG 239
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A V G
Sbjct: 240 GMERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYNGMMELTESMFRYLAEKVCGSTR 299
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I YQG EI L +P+ R TM + ++E TGIDF++ +K +E R L D +
Sbjct: 300 ITYQGTEIDLGKPFCRLTMIDAIREKTGIDFDQ----VKTLEEA--RKLAD----EHHIA 349
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G+++N FE E L+QPTF++D+P+EISPL K + ERFEL+I GR
Sbjct: 350 YEPHHKRGDIINLFFEENCEESLIQPTFIMDHPVEISPLTKKSTKDPSKVERFELYIYGR 409
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EM NA+SEL DP+DQR R EQ + AAA E+++ H+ D+DF
Sbjct: 410 EMCNAYSELNDPIDQRERFAEQ-----DALAAAGDEEAN----------HT-----DEDF 449
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ A+E GMPP G+G GIDRLVMLLT+S +IRDV+ FP LK
Sbjct: 450 LNAMEIGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLFPTLK 490
>gi|376259795|ref|YP_005146515.1| lysyl-tRNA synthetase [Clostridium sp. BNL1100]
gi|373943789|gb|AEY64710.1| lysyl-tRNA synthetase (class II) [Clostridium sp. BNL1100]
Length = 499
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/529 (45%), Positives = 337/529 (63%), Gaps = 44/529 (8%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNSE 110
+ S D + +R K+++L+ K +P+ K+D T+S + + + E
Sbjct: 9 NQQSEEDLSEILRVRRAKLKDLQDKDSDPFKIVKYDVTNSTKNIIDNFEA--------QE 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
S+AGR++++R GK F L+D G IQLY K+ + + ++ K + DIGDI+GV
Sbjct: 61 GQTASIAGRLMSKRGMGKAGFCDLQDRDGKIQLYVRKDEVGDEVYEMFKKY-DIGDIVGV 119
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + +T KGE+S+ V +L+KSLLPLP+K+HGL D D RYRQRYVD+I PEV + F
Sbjct: 120 KGEIFKTHKGEISIKVKEITLLSKSLLPLPEKWHGLKDTDLRYRQRYVDLIVNPEVKNTF 179
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+KI+ IRK +++ GF+EV+TP+L GGA ARPF+T+HN+L D+YLRIA EL+L
Sbjct: 180 ILRSKIIKSIRKFLDNRGFLEVDTPLLNTIPGGATARPFITHHNTLDIDMYLRIAPELYL 239
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG EK+YE+GR+FRNEG+S +HNPEFT +E+YEAY+DY+ MM +TE +++ A+
Sbjct: 240 KRLIVGGMEKVYEMGRMFRNEGMSVKHNPEFTMMEVYEAYNDYKGMMELTENLISTVAME 299
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDG 408
G I YQG EI L PW R TM VK+ +GIDF+ + D K A E+ + DG
Sbjct: 300 TLGTTKIQYQGQEIDLTPPWNRMTMIEAVKKYSGIDFDTIKTDEEAKAAAESKKVHVKDG 359
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+ G +LN +FE VE LVQPTF+ DYP+EISPL K LTER
Sbjct: 360 MVR------------GEILNLMFEEFVESNLVQPTFIYDYPVEISPLTKRKPDCPELTER 407
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI GREM NA+SEL DP+DQ+ R QV+ KR + E +
Sbjct: 408 FEFFITGREMGNAYSELNDPIDQKERFISQVK----KRDSGDEEAN-------------- 449
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DDD+VTALEYGMPP G+G+G+DRL++LLT+SASIRD++ FP +K
Sbjct: 450 --MMDDDYVTALEYGMPPTGGLGIGVDRLIILLTDSASIRDILLFPTMK 496
>gi|262282664|ref|ZP_06060432.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
gi|262261955|gb|EEY80653.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/515 (45%), Positives = 335/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + D ++AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSGQLKEKYADKSK-EELHDLADTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFNRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAISVCGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF + D+ + T L + K +E V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEAT-------ALAKEKKVPLEKHFTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+
Sbjct: 363 GHIINAFFEEFVEETLTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D D+V ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|320450006|ref|YP_004202102.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
gi|320150175|gb|ADW21553.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
Length = 491
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/512 (46%), Positives = 329/512 (64%), Gaps = 38/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +E L G +PY Y++ +THSA +EI + + V++AGR+VA R
Sbjct: 8 RLLNLEALVEAGFQPYPYRYPKTHSA---KEILSAKEGAPPESEWEEEVALAGRIVALRR 64
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L D+SG IQLY +K+ L+ ++ LK +D+GDILGV G++ T+ GE++V
Sbjct: 65 MGKVTFAHLLDESGKIQLYFQKD--LTPSYELLKK-LDVGDILGVKGTVFTTKTGEVTVK 121
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V S+ L KSL PLPDK+HG+ D + RYRQRY+D+I PEV +VFR+R +V IR+ E
Sbjct: 122 VLSWTPLVKSLHPLPDKWHGIKDKEVRYRQRYLDLIVNPEVREVFRRRTAMVRYIRRFFE 181
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP+LQ GGAEARPF TYHN+L + YLRI+ EL+LKR+L+GGFEK++EIG
Sbjct: 182 ERGFLEVETPILQPTTGGAEARPFKTYHNALDHEFYLRISLELYLKRLLVGGFEKVFEIG 241
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ HNPEFT +E Y AY+DYQ M + EE+++ L + G + YQG +
Sbjct: 242 RNFRNEGIDHNHNPEFTMLEAYWAYADYQDMAKLVEELLSGLVLHLFGSYQVPYQGRVLD 301
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
P+RR + +KE G+ F+ L DL+ LR D + + PS
Sbjct: 302 FTPPFRRISFVEALKEKAGLPFDPL--DLE-----RLRIFADAHHPE----LAQVPSY-K 349
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LL+++F I VEP+L PTFV D+P+ ISPLAK HR GLTER++L+ G E+A A+SEL
Sbjct: 350 LLDKLFGIYVEPELQNPTFVFDFPLAISPLAKRHREKPGLTERWDLYAGGMELAPAYSEL 409
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DPLDQR R EQ R+ +E D+ + E D+DF+ ALEYGMP
Sbjct: 410 NDPLDQRERFLEQARRR------------------REGDEEAPEP--DEDFLLALEYGMP 449
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA+G+GLG+DRL M+LT+ S+RDV+ FP+LK
Sbjct: 450 PAAGLGLGLDRLAMILTDQPSLRDVLLFPLLK 481
>gi|414158395|ref|ZP_11414689.1| lysyl-tRNA synthetase [Streptococcus sp. F0441]
gi|410870940|gb|EKS18897.1| lysyl-tRNA synthetase [Streptococcus sp. F0441]
Length = 496
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 337/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V++R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + DL + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DLTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|359403139|ref|ZP_09196046.1| lysyl-tRNA synthetase [Spiroplasma melliferum KC3]
gi|438118375|ref|ZP_20871352.1| lysyl-tRNA synthetase [Spiroplasma melliferum IPMB4A]
gi|357968356|gb|EHJ90865.1| lysyl-tRNA synthetase [Spiroplasma melliferum KC3]
gi|434155802|gb|ELL44720.1| lysyl-tRNA synthetase [Spiroplasma melliferum IPMB4A]
Length = 500
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/523 (44%), Positives = 337/523 (64%), Gaps = 35/523 (6%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGE-ESNSENDHV 114
+++E +R ++KK L S G P+ K+DRTH++ +L E + HL+ ++S+N V
Sbjct: 7 TEQEQIRRDKLKK---LVSDGHNPFIIAKFDRTHTSKELNEQFNHLSKETLATSSDNMTV 63
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
+AGR+ R GK +F TL+D +G Q+Y + + +++ + F D+GDI+GV+G M
Sbjct: 64 KIAGRIKTFREAGKASFATLQDQNGIFQIYVRNDEVGDEKYQEFINF-DLGDIIGVTGIM 122
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
+T GEL+V V FV+L K+L LPDKYHG+TD++++YR+RYVD+I+ E D+F KR+
Sbjct: 123 MKTNTGELTVRVKEFVLLAKALRALPDKYHGMTDIEEKYRRRYVDLITSTETKDIFIKRS 182
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI++ +R S G++EVETPVLQ GGA A+PFVT+HN+L D YLR+ATEL LKR++
Sbjct: 183 KIIALMRDFFNSKGYLEVETPVLQPIHGGAAAKPFVTHHNTLDMDFYLRVATELPLKRLI 242
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFE +YEIGR+FRNEG+ TRHNPEFTT+E+Y AY D MM +TE+ + + A + K
Sbjct: 243 VGGFEGVYEIGRLFRNEGMDTRHNPEFTTVEIYVAYQDMNFMMQLTEDTICYIAKNILNK 302
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
+Y GV I ++PW+R M + +KE GIDF K T + K
Sbjct: 303 NETEYDGVMISFQQPWKRWHMVDAIKELVGIDF---------WKPMTFAEAKKIAKEKKV 353
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
+ + SVG+++N FE VE KL+QPTF+ +P+E+SPLAK + T+RFELFI
Sbjct: 354 PIEKFHTSVGHIINLFFEEFVEDKLIQPTFIYGHPVEVSPLAKTNAEDPRFTDRFELFIK 413
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE ANA+SEL +P++Q R Q ++E+ + ++ +E LD
Sbjct: 414 GREYANAYSELNNPVEQYDRFVSQ-----------LAERDNGNDEAQE---------LDI 453
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ ALEYGMPP G+G+GIDRLVMLLT SI+DV+ FP ++
Sbjct: 454 DFIEALEYGMPPTGGLGIGIDRLVMLLTGQDSIKDVLLFPHMR 496
>gi|281490916|ref|YP_003352896.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
gi|281374674|gb|ADA64194.1| Lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
Length = 494
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/519 (45%), Positives = 324/519 (62%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+E LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMENLREAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E D F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFDRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR ++ GF+EVETP+L AGGA ARPF T+HN+L D+ LRIA ELHLKR+++GG E
Sbjct: 186 IRHYMDGRGFLEVETPILHSEAGGAAARPFFTHHNTLDIDMALRIALELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YEIGR+FRNEG+ T HNPEFT +E YEAY+D+ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYEIGRVFRNEGMDTTHNPEFTMLESYEAYADFHDVMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|347543115|ref|YP_004857754.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986153|dbj|BAK81828.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 510
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/517 (45%), Positives = 334/517 (64%), Gaps = 44/517 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K+ +L+ +G++P+ YK D T + + + Y S+ E V +AGR++ +
Sbjct: 31 IRRNKLSDLQERGMDPFNVYKVDVTDYSKSIIDNY--------SDYEGRVVKLAGRIMTK 82
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F+T++D G IQ++ + + L + D + + DIGDI+ V G + +T+ GE++
Sbjct: 83 RGQGKAGFITIQDTLGQIQIFVKIDILGKEVLDNVFSY-DIGDIIWVEGEVFKTKVGEIT 141
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V+ +++KSL LP+K+HG+TD D RYR R +D+I +V DVF KR+KI+SEIR
Sbjct: 142 VRVSKINLISKSLRVLPEKFHGITDPDLRYRHREIDIIMNKDVKDVFLKRSKIISEIRSF 201
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++E ETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GF+K+YE
Sbjct: 202 LDNRGYLEAETPILSLIAGGAAARPFLTHHNTLNMDMYLRIATELYLKRLIVSGFDKVYE 261
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+ +HNPEFT IE+YEAYSDY MM +TE++++ L V G + I+YQG E
Sbjct: 262 MGKNFRNEGIDIKHNPEFTMIELYEAYSDYNDMMKLTEDLISSVCLKVCGSMKINYQGTE 321
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELG--NDLKVAKETTLRALGDGLENKDKFVIESSP 421
I PWRR +M + V E +G+DFN L + +AKE LE K
Sbjct: 322 IDFTPPWRRISMLDAVYEYSGVDFNTLTLEDSYNIAKEHN-------LEFKKNL---KDC 371
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G +LN +FE VE L+QPTF++DYP+EISPL K R TERFE FI GRE+ NA
Sbjct: 372 SKGEVLNAMFEKYVEDNLIQPTFIIDYPVEISPLTKKKRGDENFTERFEGFIYGREICNA 431
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTAL 540
+SEL DP+ QR R S QE +E DD +Y ++D+DF+ +L
Sbjct: 432 YSELNDPIVQRERF-------------------SKQELDRELGDDEAY--SIDEDFMYSL 470
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDR+VM LTNS SIRDVI FP +K
Sbjct: 471 EYGMPPTGGLGIGIDRIVMFLTNSYSIRDVILFPTMK 507
>gi|422420824|ref|ZP_16497777.1| lysyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
gi|313639775|gb|EFS04521.1| lysyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
Length = 498
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/513 (44%), Positives = 331/513 (64%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KVE LR +G++P+ K+ R+ S +++ + + EE + V+VAGR++ +R
Sbjct: 15 VRREKVETLREEGVDPFGGKFIRSISPEEIETKFADKSK-EELEEASIEVTVAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D +Q+Y K+ + D + K+ D+GDI+G+ G++ RT GELSV
Sbjct: 74 VKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKI-ADLGDIIGIKGTIFRTNTGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +L+KSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ R +
Sbjct: 133 KATEFTLLSKSLRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+L +LYLRIA ELHLKR+++GG +K+YEI
Sbjct: 193 DNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKRLIVGGMDKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG STRHNPEFT +E Y AY DY+ +M++ E +V+ VNG I ++
Sbjct: 253 GRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCEQVNGTTKITXXEYDV 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L WRR M + VKE G+DF + +D + + L + + + G
Sbjct: 313 DLTPKWRRIHMADAVKEYVGVDFWNVTSDEEAHQ----------LAKEHNVPVTKHMTYG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LNE FE VE KL+QPTFV +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 363 HILNEFFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ ++ +D ++ +D DF+ ALEYG+
Sbjct: 423 LNDPIDQRERFEAQMKER------------------EQGNDEAH--GMDADFLEALEYGL 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRD++ FP +K
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMK 495
>gi|385800600|ref|YP_005837004.1| lysyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389964|gb|ADO77844.1| lysyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 493
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/512 (44%), Positives = 336/512 (65%), Gaps = 39/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R K+ ELR + +A K+ TH A +++ + L E V +AGR++A R
Sbjct: 16 RRDKLSELRKEKENAFAEKYKVTHHAAEVESNFAEL--------EEKEVRLAGRLMAIRT 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK +F L D SG +QLY ++ + D+++ + +D+GD++G++G++ +T +G++S+
Sbjct: 68 HGKASFADLVDMSGKVQLYVKQNNIGEDRYEFFQD-LDLGDVVGITGTVFKTNRGQISIR 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V SF +LTKSL PLP+K+HGL D D RYRQRY+D+I P+V + F R+KI+ E+R+ +E
Sbjct: 127 VASFELLTKSLRPLPEKFHGLKDKDIRYRQRYLDLIVNPDVKETFVIRSKIIKEMRRYLE 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP++ AGGA ARPFVT+HN+L DLYLRIA EL+LK++++GGFEK++EI
Sbjct: 187 DKGFLEVETPMMHPIAGGATARPFVTHHNALDMDLYLRIAPELYLKKLIVGGFEKVFEIN 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S +HNPEFTT+E+Y+A +DY MM +TE ++++ A V ++Y+ EI
Sbjct: 247 RNFRNEGMSYKHNPEFTTMELYQAQADYHDMMELTENLISYLAAEVLDTQVVEYEETEID 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PW R TM + +K+ +DF+ ++ A+E A G++ E S G
Sbjct: 307 FTAPWDRITMVDAIKKYAKVDFSA----IESAEEAYELAASVGVKP------EPGLSYGE 356
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++NEVFE VE KL+QPTF++DYPIE+SPLAK T RFE F+ GRE+ANAFSEL
Sbjct: 357 VINEVFEERVEEKLIQPTFIMDYPIEVSPLAKKMDEDPRFTYRFEAFVYGREIANAFSEL 416
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP +Q+ R E+QV +++E+ D ++ +D DF+ ALEYGMP
Sbjct: 417 NDPEEQKRRFEKQV-------------------EMREAGDEEAQM-MDYDFIRALEYGMP 456
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRL+M LTNS+SIRDVI FP ++
Sbjct: 457 PTGGLGIGIDRLIMFLTNSSSIRDVILFPTMR 488
>gi|219849235|ref|YP_002463668.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219543494|gb|ACL25232.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 496
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/517 (44%), Positives = 332/517 (64%), Gaps = 37/517 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++A R K+E+LR+ GL+PY + R+H+ Q+ + LA GE V++AGR++
Sbjct: 9 LQAQRAAKLEQLRAAGLDPYPPRCRRSHTIGQVLAAFDELAAGEAV------VTLAGRII 62
Query: 122 -ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
ARR GK+AF + D +G IQL+ + L + F++ + +D DI+ +G+++RT+ G
Sbjct: 63 GARRVMGKIAFAHIEDGTGEIQLWLSRADLGDEWFERFRDQIDTFDIVQATGTLRRTKTG 122
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E S+ V +L K++ P P+K+ GL DV++R+RQRY+D+I E D+FR RA+++S +
Sbjct: 123 ERSLFVREMAVLAKAINPPPEKWAGLQDVEERHRQRYLDLIVNRERRDIFRARAQVMSTM 182
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R+ ++ GF+EVETPVLQ GGA ARPFVTYHN+LG++LYLRIATEL+LKR+++GGF
Sbjct: 183 RRVLDDRGFLEVETPVLQPIYGGAAARPFVTYHNALGQNLYLRIATELYLKRLIVGGFPG 242
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YEIG+ FRNEG+ HNPEFT +E Y+AY+DY +MM + EE++ LAV+G TI YQ
Sbjct: 243 VYEIGKNFRNEGVDRSHNPEFTMMECYQAYADYHAMMTLVEEMLGEICLAVHGTTTISYQ 302
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G E+ L PW R M + + E TGID + + T L +L + ++ ++
Sbjct: 303 GRELDLRPPWPRIAMADAIVERTGID---------ITRHTDLDSLHAAIADR-GLRVDRK 352
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
S ++E+F V+P L QPTF++DYP+ +SPLAK TERFE FI G E+ N
Sbjct: 353 TSWAKQVDELFSEFVQPHLFQPTFIIDYPVAMSPLAKRIPGRPDFTERFEAFIAGMEIGN 412
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP DQ R EQ+ RA A ++ + Q +D+DF+ AL
Sbjct: 413 AFTELNDPFDQEERFREQL------RAFAAGDEEAHQ--------------MDEDFINAL 452
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVM+LT+ ASIR+VI FP L+
Sbjct: 453 RYGMPPTGGLGIGIDRLVMVLTDQASIREVILFPHLR 489
>gi|418963396|ref|ZP_13515235.1| lysine--tRNA ligase [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383343511|gb|EID21695.1| lysine--tRNA ligase [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 495
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/514 (45%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV +I YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESIPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF K+ TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKDMTLEE-ATALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|22536914|ref|NP_687765.1| lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|25010826|ref|NP_735221.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|76798749|ref|ZP_00780967.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
gi|77405989|ref|ZP_00783067.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
gi|77410771|ref|ZP_00787129.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
gi|77413074|ref|ZP_00789275.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|410594312|ref|YP_006951039.1| lysyl-tRNA synthetase [Streptococcus agalactiae SA20-06]
gi|417005020|ref|ZP_11943613.1| lysyl-tRNA synthetase [Streptococcus agalactiae FSL S3-026]
gi|39932195|sp|Q8E0I1.1|SYK_STRA5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|39932198|sp|Q8E656.1|SYK_STRA3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|22533765|gb|AAM99637.1|AE014225_20 lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|23095205|emb|CAD46415.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|76585904|gb|EAO62444.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
gi|77160867|gb|EAO71977.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|77163150|gb|EAO74103.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
gi|77175384|gb|EAO78175.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
gi|341576833|gb|EGS27241.1| lysyl-tRNA synthetase [Streptococcus agalactiae FSL S3-026]
gi|410517951|gb|AFV72095.1| Lysyl-tRNA synthetase [Streptococcus agalactiae SA20-06]
Length = 496
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL E Y + E+ + + ++AGR++ +R
Sbjct: 15 VRREKMAALTEQGIDPFGKRFERTATSGQLNEKYADKSK-EDLHDIEETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDSVGEENYEIFKK-ADLGDFLGVEGQVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTD++ YR+R++D+IS + D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DSNGFLEVETPVLHNEAGGASARPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE Y+AY+DYQ +M++TE I+ H V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + VKE TGIDF KE TL + K+ + + +VG
Sbjct: 313 KINEPFKRVHMVDAVKEITGIDF---------WKEMTLEEAQALAQEKNVPLEKHFTTVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEDTLIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q +SA+E DD + V D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------------ASAKEL---GDDEATGV--DYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|170017769|ref|YP_001728688.1| lysyl-tRNA synthetase [Leuconostoc citreum KM20]
gi|238688932|sp|B1MVJ0.1|SYK_LEUCK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|169804626|gb|ACA83244.1| Lysyl-tRNA synthetase [Leuconostoc citreum KM20]
Length = 493
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/501 (46%), Positives = 328/501 (65%), Gaps = 35/501 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A +L ++Y + + E SE V +AGR++A+R GK+ F RD
Sbjct: 27 LDPFGKRFERTAKAQELHDLYDN-STLETLESEQHEVVIAGRMIAKRGAGKVIFADFRDV 85
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L + + +K D+GD LG+ G + +TE GEL+VL LTK+L
Sbjct: 86 SGKIQVYAKRDDL-GENYPIIKR-ADLGDFLGIKGIIMKTEAGELTVLATELTHLTKALR 143
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG+ DV+ RYR+RY+D+I+ E F+ R+KI+S IR ++S F+EVETP+L
Sbjct: 144 PMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETPIL 203
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GGFE++YEIGRIFRNEG+ +H
Sbjct: 204 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNEGMDPKH 263
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +M+ TE I A V+ L + YQG EI L + R+ M +
Sbjct: 264 NPEFTTMETYAAYMDFTDVMDETEGIFKAAASVVSDDLKVTYQGTEIDLGSNFARKHMVD 323
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSVGNLLNEVFEIVVE 436
L+KE TGIDF + D+ V L DK V E VG+++N FE VE
Sbjct: 324 LIKEQTGIDFWQ---DMSVEAAQKL--------ADDKHVKYEKYWGVGHIINAFFEEFVE 372
Query: 437 PKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLE 496
LVQPTFV +P+E+SPLAK + + T+RFELFI G E NAF+EL DP+DQRAR E
Sbjct: 373 DTLVQPTFVYGHPVEVSPLAKRNAEDSRFTDRFELFIMGSEYGNAFTELNDPIDQRARFE 432
Query: 497 EQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDR 556
Q V+E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDR
Sbjct: 433 AQ-----------VAERENGNDEAE---------NIDEDFIEALEYGMPPTGGLGIGIDR 472
Query: 557 LVMLLTNSASIRDVIAFPILK 577
LVMLLT+S +IRDV+ FP ++
Sbjct: 473 LVMLLTDSDTIRDVLLFPTMR 493
>gi|157151486|ref|YP_001450052.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
CH1]
gi|189082972|sp|A8AW92.1|SYK_STRGC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|157076280|gb|ABV10963.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 496
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y + EE + D ++AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSGQLKEKYADKSK-EELHDLADTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFNRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A++V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAISVCGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + T L + K+ + + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMSFEEATAL------AKEKNVPLEKHFTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTF+ +P+ +SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HVINAFFEEFVEETLTQPTFIYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496
>gi|227486473|ref|ZP_03916789.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
gi|227235654|gb|EEI85669.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
Length = 637
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/526 (44%), Positives = 338/526 (64%), Gaps = 43/526 (8%)
Query: 53 STSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSEN 111
+ + D + +R +K+ EL+ +G +P+ + S+ ++++ + E+
Sbjct: 2 ADNIQDLNEMLKIRREKLHELKEEGKDPHRIVNFKNRISSKEIKDNFEKY--------ED 53
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V VAGR++A+R G ++F+ ++DD G IQ+ ++ ++ D F +K + DIGDI+GV
Sbjct: 54 QTVRVAGRILAKRGHGNMSFMDVQDDLGQIQV-VNRKNVIGDDFKYIKKY-DIGDIIGVE 111
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G + +T +GE+S+ V +LTK+L LP+K+HGL D D RYRQRY+D+I PEV +VF
Sbjct: 112 GKVFKTNQGEISIEVAKSDLLTKALQMLPEKWHGLKDPDLRYRQRYIDLIVNPEVKEVFV 171
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
+R++I+S IR+ ++ GF+EVETP+L AGGA ARPF+T+HN+L D+YLRIA EL+LK
Sbjct: 172 QRSRIISAIREFLDGRGFLEVETPILNTIAGGATARPFITHHNTLDIDMYLRIANELYLK 231
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GGF+++YEIGR+FRNEG+ HNPE+T +E+Y+AY DY+ MM ITE +V H A V
Sbjct: 232 RLIVGGFDRVYEIGRMFRNEGMDATHNPEYTAMELYQAYGDYEDMMEITENMVEHVAKKV 291
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G +++ G EI L+ PW+R M VKE +G+DFNE+ D +E A G+E
Sbjct: 292 KGTTLVEFDGHEIELKAPWKRIPMIEAVKEYSGVDFNEIKTD----EEAKAIAKEKGVEV 347
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
K+ + G ++ E F+ VE KL+QPTF+ DYP+EISPLAK LT RFE
Sbjct: 348 KE--------TRGEIIAEFFDEFVEDKLIQPTFITDYPVEISPLAKRKNDDRSLTYRFEA 399
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
F+ G E+ NAFSEL D DQRAR E+QVR KR A E AQ
Sbjct: 400 FVSGAEIGNAFSELNDAEDQRARFEDQVR----KREAGDDE---AQ-------------M 439
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D DFV ALE G+PP G+G+GIDRL+M+LT SIRDV+ FP +K
Sbjct: 440 MDYDFVNALEVGLPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 485
>gi|417920802|ref|ZP_12564301.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
gi|342827926|gb|EGU62306.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
Length = 496
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 333/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT + QL+E Y L + E+ + N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTADSGQLKEKYSEL-DKEQLHDLNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGASARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DYQ +M++TE I+ H A A++G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHAAKAIHGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE G+DF + D+ + L + K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEIAGVDFWQ---DMSFEEAVAL------AKEKHVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEYVEETLTQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R E Q R A+E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLERFEAQAR---------------AKEL---GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|417924749|ref|ZP_12568180.1| lysine--tRNA ligase [Streptococcus mitis SK569]
gi|342835394|gb|EGU69637.1| lysine--tRNA ligase [Streptococcus mitis SK569]
Length = 496
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDF---WKDMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|347757461|ref|YP_004865023.1| lysyl-tRNA synthetase [Micavibrio aeruginosavorus ARL-13]
gi|347589979|gb|AEP09021.1| lysyl-tRNA synthetase [Micavibrio aeruginosavorus ARL-13]
Length = 550
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/533 (44%), Positives = 336/533 (63%), Gaps = 38/533 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A +S T+ + R + K++ L++ G++PY + + RTH LQ++Y+ L NG E++
Sbjct: 55 AQNSETTVTTAGNPRLAKQVKLDALKAAGIDPYPHVFPRTHQNGTLQDMYKDLPNGTETD 114
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
DHV+VAGR++A R G FL L D SG +Q++C K+ + + L F DIGDI+
Sbjct: 115 ---DHVAVAGRIMAIRNNG--MFLDLMDPSGKMQVFCHKDSMSEEALSILDYF-DIGDII 168
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
G G+++RT +GELSV +LTKSL+PLP+KYHGLTDV++RYRQRY+D+I E
Sbjct: 169 GAEGTVRRTPRGELSVRAKKVTMLTKSLMPLPEKYHGLTDVEQRYRQRYLDLIMNDESRQ 228
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
R+KI+S IRK +E G +EVETP++ GGA A+PFVT+HN+L D +LRIA EL
Sbjct: 229 KLLMRSKIISTIRKFMEEHGAIEVETPMMHPILGGASAKPFVTHHNALDADFFLRIAPEL 288
Query: 289 HLKRMLIGGF-EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
+LKR+++GG + ++EI R FRNEG+S +HNPEFT IE Y AY DY +M++ E++V
Sbjct: 289 YLKRLIVGGLADAVFEINRNFRNEGISYKHNPEFTMIESYHAYKDYYDVMDLIEKLVQAV 348
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A+AV+G L I++QG I L PW R+ M LV+E TG+DF + A + A
Sbjct: 349 AMAVHGTLEINFQGNVINLGSPWARKGMVELVQEETGVDFMSMD-----AAQAHAEAKKL 403
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
G+ ++ + G ++ +F VE KL+QP V+D+P++ISPL+K HR + L E
Sbjct: 404 GVH------VDPKANWGQVVETIFGEKVEHKLIQPIHVIDHPLDISPLSKVHRNNPRLVE 457
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE +I G EMANAF+EL DP Q R +QV Q A
Sbjct: 458 RFESYINGWEMANAFTELNDPKIQHDRFMDQVAQREGGNEEA------------------ 499
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+ +D DFVTALEYG+PP G G+GIDRL M++T+S +IR+VIAFP LK ++
Sbjct: 500 --MMVDHDFVTALEYGLPPTGGWGMGIDRLTMIMTDSHNIREVIAFPTLKPEK 550
>gi|322387891|ref|ZP_08061498.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
gi|419843861|ref|ZP_14367166.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
gi|321141164|gb|EFX36662.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
gi|385702285|gb|EIG39430.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
Length = 496
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/514 (44%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G + YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHVAKAVKGDAPVIYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KLNEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|406671673|ref|ZP_11078912.1| lysine-tRNA ligase [Facklamia hominis CCUG 36813]
gi|405580923|gb|EKB54982.1| lysine-tRNA ligase [Facklamia hominis CCUG 36813]
Length = 501
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/515 (44%), Positives = 334/515 (64%), Gaps = 34/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV--SVAGRVVA 122
+R K++ + G+ P+A +++ + L E Y+ +ES E + SVAGR+V+
Sbjct: 17 VRRDKMKAMAQAGVNPFAAGFEKEDYSQDLIEKYQD--KSKESFEEEAQIIASVAGRIVS 74
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK F ++D G IQ+Y ++++ D F K D+GDI+GV G + +T GEL
Sbjct: 75 KRGKGKAGFAHIQDLKGKIQIYVRQDKVGEDAFAWWKA-ADLGDIVGVKGEVFKTNTGEL 133
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ + F+ LTK+L PLPDK+HGLT++++RYRQRY+D+IS + F KR++I+ E+R
Sbjct: 134 SIKAHEFIPLTKALRPLPDKFHGLTNIEQRYRQRYLDLISNEDSYQRFIKRSEIIREVRH 193
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ G++EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR++IGG E++Y
Sbjct: 194 YLDERGYLEVETPVLHNLAGGANARPFITHHNALDMELYLRIALELHLKRLVIGGMERVY 253
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIGR+FRNEG+ T HNPEFT IE+Y AYS Y +M++TE ++ A V G + Y+
Sbjct: 254 EIGRVFRNEGIDTTHNPEFTMIEVYTAYSVYTDVMDLTEGLIRSVAQRVLGDAKVSYEDQ 313
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
I LE PW R M +++KEATG+DF +E T D + V++ +
Sbjct: 314 IIDLESPWARRHMVDMIKEATGVDF---------WQEMTFDQAKDLAKEHGVPVLDHDLT 364
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG+++N FE VE +VQPTFV +P EISPLA+ + + T+RFELFI G E ANAF
Sbjct: 365 VGHIINNFFEEKVEETIVQPTFVYGHPTEISPLARKNEKDPRFTDRFELFIAGHEYANAF 424
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
+ELTDP+DQR R E Q ++EK++ ++ + +D+DF+ +LEY
Sbjct: 425 TELTDPIDQRERFEAQ-----------MAEKNAGNDEAQ---------PVDEDFLESLEY 464
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+++SIRDV+ FP L+
Sbjct: 465 GMPPTGGLGIGIDRLVMLLTDASSIRDVLLFPTLR 499
>gi|15896444|ref|NP_349793.1| lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738403|ref|YP_004637850.1| lysyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459913|ref|YP_005672333.1| lysyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|39932231|sp|Q97EB7.1|SYK_CLOAB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|15026267|gb|AAK81133.1|AE007815_3 Lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510602|gb|ADZ22238.1| lysyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292063|gb|AEI33197.1| lysyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 515
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 332/513 (64%), Gaps = 37/513 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K+ + + +G +P+ YK +RTH++ Q+ + Y L E+ V+VAGR++++R
Sbjct: 33 RRQKLSDAQERGKDPFDVYKVERTHTSKQIVDNYDEL--------EDKIVTVAGRLMSKR 84
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + + ++ + K F DIGD + ++G + +T+ GE+++
Sbjct: 85 VHGKAGFSDIYDRYGKIQLYLKIDDVGEEKLKEFKTF-DIGDFVVITGKVFKTKTGEITL 143
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V ++ KSL PLP+K+HGL D D +YRQRYVD+I +V + F KR I+ +R+ +
Sbjct: 144 HVTKLELIAKSLKPLPEKFHGLKDPDLKYRQRYVDLIINQDVRETFMKRTAIIKAVREFL 203
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ ++EVETPVL A GA ARPF T+HN+L D++LRIATEL+LKR+++GGFEK+YEI
Sbjct: 204 DNKDYLEVETPVLSTIASGASARPFSTHHNALDLDMHLRIATELYLKRLIVGGFEKVYEI 263
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + VNG I Y+G EI
Sbjct: 264 GKDFRNEGIDVRHNPEFTMIELYEAYADYNDMMEITENMVAYACQKVNGTTKITYEGTEI 323
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PWRR TM ++VKE +GIDF+ + D + + + L E KD + G
Sbjct: 324 DLTPPWRRVTMVDIVKEHSGIDFSTVKTDEEAREIAKEKKLELKKELKD-------CTKG 376
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN +FE E KL+QPTFV DYP+EISPL K R + TERFE FI GRE+ NA+SE
Sbjct: 377 DILNALFEEYGEKKLIQPTFVCDYPVEISPLTKKKRGNPEYTERFEGFIYGREICNAYSE 436
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ Q+ R +Q+++ + DD +Y+ +DDDF+ ALE GM
Sbjct: 437 LNDPIVQKDRFMQQLKER------------------ELGDDEAYQ--MDDDFINALEIGM 476
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP GMG+G+DRLVM LT+S SIRDVI FP +K
Sbjct: 477 PPTGGMGMGMDRLVMFLTDSPSIRDVILFPTMK 509
>gi|429766542|ref|ZP_19298803.1| lysine--tRNA ligase [Clostridium celatum DSM 1785]
gi|429184224|gb|EKY25249.1| lysine--tRNA ligase [Clostridium celatum DSM 1785]
Length = 501
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/521 (44%), Positives = 334/521 (64%), Gaps = 51/521 (9%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
LR +K+ +L+ +G +P+ YK +RTHS+ ++++ + L E V+VAGR++++
Sbjct: 21 LRREKLVQLQQEGKDPFDVYKVNRTHSSQEVKDNFDTL--------EGKEVTVAGRIMSK 72
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F + D G IQL+ + + + + Q K D+GD + +G + +T+ GE+S
Sbjct: 73 RGQGKVVFSDIHDRDGKIQLFIKIDEVGEEALKQYKT-NDLGDWVACTGEVFKTKTGEIS 131
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V + ++ KSL PLP+K+HGL D D RYRQR VD+I+ PEV F KR +I+ IR+
Sbjct: 132 VKAKTIELICKSLKPLPEKWHGLKDPDLRYRQREVDIITNPEVKTTFMKRTQIIKGIREF 191
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EVETP+L AGGA ARPF+T+HN+L D++LRIA EL+LKR ++ GFEK+YE
Sbjct: 192 LDNRGFLEVETPMLATIAGGASARPFITHHNTLDLDMFLRIAPELYLKRCIVAGFEKVYE 251
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR FRNEG+S RHNPEFT IE+Y+A++DY MM +TE +V VNG + YQG E
Sbjct: 252 LGRTFRNEGMSVRHNPEFTMIELYQAFADYNDMMELTENMVAEVCKKVNGTTKVTYQGTE 311
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTL---RALGDGLENKDKFVI 417
I PWRR TM + VKE GIDFNE+ D + +AKE L + L
Sbjct: 312 IDFMPPWRRITMVDAVKEYAGIDFNEIKTDEEAQAIAKEKHLEFPKPL------------ 359
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
++ + G +LN ++E E ++QPTF++DYP+EISPL K R + TERFE F+ GRE
Sbjct: 360 -NTVTKGEVLNMLYEEYCEEHMIQPTFIIDYPVEISPLTKKKRGNEMFTERFEGFVFGRE 418
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDF 536
+ NA+SEL DP+ QR R + QEK +E DD +Y +D++F
Sbjct: 419 LCNAYSELNDPIVQRERF-------------------AQQEKERELGDDEAY--MIDEEF 457
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ALE GMPP G+G+GIDRL+M LT+SASIRDVI FP +K
Sbjct: 458 MSALETGMPPTGGLGIGIDRLIMFLTDSASIRDVILFPTMK 498
>gi|414155919|ref|ZP_11412228.1| lysyl-tRNA synthetase [Streptococcus sp. F0442]
gi|410872128|gb|EKS20072.1| lysyl-tRNA synthetase [Streptococcus sp. F0442]
Length = 496
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 331/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT + QL+E Y L + E+ + N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTADSGQLKEKYSEL-DKEQLHDLNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGASARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DYQ +M++TE I+ H A A++G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHAAKAIHGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE G+DF +E + + K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEIAGVDF---------WQEMSFEEAAALAKEKHVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEYVEETLTQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R E Q R A+E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLERFEAQAR---------------AKEL---GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|421277612|ref|ZP_15728431.1| lysine--tRNA ligase [Streptococcus mitis SPAR10]
gi|395874864|gb|EJG85946.1| lysine--tRNA ligase [Streptococcus mitis SPAR10]
Length = 496
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHVAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|423068229|ref|ZP_17057017.1| lysyl-tRNA synthetase [Streptococcus intermedius F0395]
gi|424787454|ref|ZP_18214220.1| lysine--tRNA ligase [Streptococcus intermedius BA1]
gi|355367120|gb|EHG14833.1| lysyl-tRNA synthetase [Streptococcus intermedius F0395]
gi|422113749|gb|EKU17476.1| lysine--tRNA ligase [Streptococcus intermedius BA1]
Length = 495
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/514 (45%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMTALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF KE TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKEMTLEE-ATALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|421490452|ref|ZP_15937824.1| lysine--tRNA ligase [Streptococcus anginosus SK1138]
gi|400372942|gb|EJP25877.1| lysine--tRNA ligase [Streptococcus anginosus SK1138]
Length = 495
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/514 (45%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF KE TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKEMTLEE-ATALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|342163382|ref|YP_004768021.1| lysyl-tRNA synthetase [Streptococcus pseudopneumoniae IS7493]
gi|341933264|gb|AEL10161.1| lysyl-tRNA synthetase [Streptococcus pseudopneumoniae IS7493]
Length = 496
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KAIHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGASARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|401563787|ref|ZP_10804724.1| lysine--tRNA ligase [Selenomonas sp. FOBRC6]
gi|400189475|gb|EJO23567.1| lysine--tRNA ligase [Selenomonas sp. FOBRC6]
Length = 501
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 335/513 (65%), Gaps = 35/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R+ G+ P+ ++++ T A L+E Y +LA EE V +AGR++A R
Sbjct: 20 VRREKMDAFRAMGVAPFGHRFEVTDYAADLKERYDYLAEDEEGKE----VRIAGRLMAIR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F TL D +G IQ+Y + + L ++ + +DIGDI+G+ G + +T +GE++V
Sbjct: 76 GHGKASFSTLNDRTGNIQVYFKMDVLGERKYKEEFKRLDIGDIIGIRGVVFKTRRGEITV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV + FRKR KI+ IR+ +
Sbjct: 136 RVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNHEVRETFRKRTKIIQSIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL LKR+++GG +++YE+
Sbjct: 196 DERDYLEVETPVLSTLAGGAAARPFITHHNALDIDLYLRIATELSLKRLIVGGLDRVYEM 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ RHNPEFT+IE+Y+A++D++ +M ITE I+ A V G I YQGV+I
Sbjct: 256 GRIFRNEGMDVRHNPEFTSIEIYQAFADHRDLMAITEGIIRQAAEDVLGTTQITYQGVDI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L R +M++ V+EATG DF ++ ET A E F E +G
Sbjct: 316 DLNN-VRTISMNDAVREATGKDF--------LSCETVEEARAMAREIGVPF--EERHGIG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPTF+ +P EISPLAK + +T+RFE F+ GRE+AN F+E
Sbjct: 365 GILNAAFEEKVEESLMQPTFITGHPTEISPLAKRNADDPRITDRFEFFVYGRELANGFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R EQ+ AQ + +++ H +D DF+TALEYG+
Sbjct: 425 LNDPIDQEQRFMEQL----------------AQREAGDAEAH----VMDRDFITALEYGL 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 465 PPTGGLGIGVDRLVMLLTDSASIRDVLLFPTMK 497
>gi|366090569|ref|ZP_09456935.1| lysyl-tRNA synthetase [Lactobacillus acidipiscis KCTC 13900]
Length = 498
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/519 (45%), Positives = 331/519 (63%), Gaps = 38/519 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +KV+ELR +G+ P+ +++DR L + Y L EE N + ++AGR+VA+R
Sbjct: 13 VRRQKVDELRDEGIAPFGHRFDRDSYNEDLHQKYEGLTK-EELNDQGVTATIAGRMVAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G +QLY K+ L D + K D+GD LGV+G + +T+ GEL++
Sbjct: 72 GKGKVGFADLQDRTGKMQLYVRKDILGEDNYHVFKR-SDLGDFLGVTGEVIKTDMGELTL 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ L+K+L PLPDKYHGL +V++ YRQRY+D+I+ E D F R++IV+ +R +
Sbjct: 131 RVSKLTFLSKALRPLPDKYHGLQNVEQIYRQRYLDLITNRESYDRFVHRSQIVAAVRNYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DTEGFLEVETPVLHNQAGGASARPFKTHHNALDIELYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY D+ +MN TE I V+ I YQG E+
Sbjct: 251 GRVFRNEGIDTKHNPEFTMLESYAAYFDFTDVMNETEGIFKAACRVVSDDNKITYQGNEV 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFVIESSP 421
+P+RR M +++KE TGIDF +E +L R L D EN + E+
Sbjct: 311 DFNKPFRRVHMVDMIKEVTGIDF---------WQEMSLEDARKLAD--ENNVHY--EAYW 357
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++N+ FE E +V PTFV +P+EISPLAK + T+RFELFI G E ANA
Sbjct: 358 QVGHIINQFFEDFCEDNIVDPTFVYGHPVEISPLAKKNADDPRFTDRFELFILGNEYANA 417
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQR R E Q ++ E A +D+D++ A+E
Sbjct: 418 FTELNDPIDQRQRFEAQAKERTEGNDEAEG--------------------IDEDYLEAME 457
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
YGMPP G+G+G+DRLVMLLT++ SIRDV+ FP L+ ++
Sbjct: 458 YGMPPTGGLGIGMDRLVMLLTDADSIRDVLLFPTLRPEE 496
>gi|387783819|ref|YP_006069902.1| lysyl-tRNA synthetase [Streptococcus salivarius JIM8777]
gi|338744701|emb|CCB95067.1| lysyl-tRNA synthetase [Streptococcus salivarius JIM8777]
Length = 496
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + +D K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYDIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFIYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|313889087|ref|ZP_07822743.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312844827|gb|EFR32232.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 635
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/515 (46%), Positives = 345/515 (66%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH--VSVAGRVVA 122
L+ +K++EL+ +G +P+ N+ ++ H +E +E D VS+AGR+++
Sbjct: 15 LKRQKLDELKKEGKDPFV---------NETYDVTAHSVGIKEEFNEADEREVSIAGRIMS 65
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK+ FL LRD G IQ++ K+ +L D+++ +K +DIGDI+GV G + +TE GE+
Sbjct: 66 KRRHGKICFLDLRDSEGNIQVFARKD-VLEDKYEDVKG-IDIGDIVGVKGIVFKTEAGEI 123
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
+V +L+KSL LP+K+HGL D D RYRQRYVD+I PEV DVF KR KI+ +IR+
Sbjct: 124 TVRATDITLLSKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEVKDVFIKRNKIIKKIRE 183
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ F+EVETP+L AGGA ARPF T+HN+L D+ LRIA EL LKR+++GGF+K+Y
Sbjct: 184 FLDKKDFLEVETPILGTVAGGANARPFYTHHNTLDIDMQLRIANELFLKRLIVGGFDKVY 243
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
E+G++FRNEG+ TRHNPEFT IE+Y+AY DY+ MM ITE++ + AL V G TI+YQG
Sbjct: 244 EMGKMFRNEGMDTRHNPEFTNIELYQAYVDYEEMMRITEDLFEYVALEVLGTDTINYQGT 303
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EICL+ PW+R TM + VK+ +DFNE+ D K A+E A G+E + + +
Sbjct: 304 EICLKAPWKRITMIDAVKKYADVDFNEIDTDEK-AREI---AREKGIE------VHENDT 353
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G LL+E+FE E LV+PTFV+ +P+++SPLAK + + LT+RFE FI E ANAF
Sbjct: 354 WGKLLSEMFEEFCEEHLVEPTFVIGHPVDVSPLAKRNPKDPRLTQRFEAFINTWEFANAF 413
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E Q V+EK++ DD ++ +D DF+ A+E
Sbjct: 414 SELNDPIDQRQRFEAQ-----------VAEKAAG-------DDEAH--PMDSDFINAIEV 453
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DR+++LLT+ SIRDV+ FP +K
Sbjct: 454 GLPPTGGLGIGVDRMIVLLTDQPSIRDVLLFPTMK 488
>gi|76787024|ref|YP_329498.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|406709243|ref|YP_006763969.1| lysyl-tRNA synthetase [Streptococcus agalactiae GD201008-001]
gi|424049682|ref|ZP_17787233.1| lysyl-tRNA ligase [Streptococcus agalactiae ZQ0910]
gi|123602016|sp|Q3K1V5.1|SYK_STRA1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|76562081|gb|ABA44665.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|389648955|gb|EIM70444.1| lysyl-tRNA ligase [Streptococcus agalactiae ZQ0910]
gi|406650128|gb|AFS45529.1| lysyl-tRNA synthetase [Streptococcus agalactiae GD201008-001]
Length = 496
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL E Y + E+ + + ++AGR++ +R
Sbjct: 15 VRREKMAALTEQGIDPFGKRFERTATSGQLNEKYADKSK-EDLHDIEETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDSVGEENYEIFKK-ADLGDFLGVEGQVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTD++ YR+R++D+IS + D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DSNGFLEVETPVLHNEAGGASARPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE Y+AY+DYQ +M++TE I+ H V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + VKE TGIDF KE TL + K+ + + +VG
Sbjct: 313 KINEPFKRVHMVDAVKEITGIDF---------WKEMTLEEAQALAQEKNVPLEKHFTTVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELF+ +E ANAF+E
Sbjct: 364 HIINAFFEEFVEDTLIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFVMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q +SA+E DD + V D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------------ASAKEL---GDDEATGV--DYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|148994403|ref|ZP_01823626.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|168488382|ref|ZP_02712581.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|417678664|ref|ZP_12328062.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
gi|418125319|ref|ZP_12762235.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44511]
gi|418191145|ref|ZP_12827650.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47388]
gi|418213883|ref|ZP_12840618.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA54644]
gi|418233907|ref|ZP_12860487.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA08780]
gi|419484419|ref|ZP_14024195.1| lysine--tRNA ligase [Streptococcus pneumoniae GA43257]
gi|419507781|ref|ZP_14047435.1| lysine--tRNA ligase [Streptococcus pneumoniae GA49542]
gi|421219900|ref|ZP_15676755.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070425]
gi|421222231|ref|ZP_15679025.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070531]
gi|421278481|ref|ZP_15729291.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17301]
gi|421293757|ref|ZP_15744481.1| lysine--tRNA ligase [Streptococcus pneumoniae GA56113]
gi|421300567|ref|ZP_15751238.1| lysine--tRNA ligase [Streptococcus pneumoniae GA19998]
gi|147927239|gb|EDK78273.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|183572998|gb|EDT93526.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|332074509|gb|EGI84985.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
gi|353799363|gb|EHD79682.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44511]
gi|353858744|gb|EHE38704.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47388]
gi|353871166|gb|EHE51037.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA54644]
gi|353889346|gb|EHE69117.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA08780]
gi|379583930|gb|EHZ48807.1| lysine--tRNA ligase [Streptococcus pneumoniae GA43257]
gi|379612626|gb|EHZ77343.1| lysine--tRNA ligase [Streptococcus pneumoniae GA49542]
gi|395589555|gb|EJG49873.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070531]
gi|395589975|gb|EJG50290.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2070425]
gi|395881853|gb|EJG92901.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17301]
gi|395895089|gb|EJH06065.1| lysine--tRNA ligase [Streptococcus pneumoniae GA56113]
gi|395899991|gb|EJH10930.1| lysine--tRNA ligase [Streptococcus pneumoniae GA19998]
Length = 496
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQ EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQSTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|384439833|ref|YP_005654557.1| lysyl-tRNA synthetase [Thermus sp. CCB_US3_UF1]
gi|359290966|gb|AEV16483.1| Lysyl-tRNA synthetase [Thermus sp. CCB_US3_UF1]
Length = 491
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/512 (46%), Positives = 330/512 (64%), Gaps = 38/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +E L +G EPY Y++ ++HSA QEI A + V++AGR+VA R
Sbjct: 8 RLLNLEALVEEGFEPYPYRFPKSHSA---QEILAAKAGAPPETEWAEEVALAGRIVALRR 64
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L D+SG IQLY +K+ L+ +++ LK +D+GDILGV G + T+ GE++V
Sbjct: 65 MGKVTFAHLLDESGRIQLYFQKD--LTPRYELLKK-LDVGDILGVKGPVFTTKTGEVTVK 121
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V S+ L K L PLPDK+HG+ D + RYRQRY+D+I PEV +VFR+R +V IR+ E
Sbjct: 122 VLSWTPLVKGLHPLPDKWHGIKDKEVRYRQRYLDLIVNPEVREVFRRRTAMVRYIRRFFE 181
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP+LQ GGAEARPF T+HN+L + YLRI+ EL+LKR+L+GGFEK++EIG
Sbjct: 182 ERGFLEVETPILQPTTGGAEARPFKTFHNALDHEFYLRISLELYLKRLLVGGFEKVFEIG 241
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ HNPEFT +E Y AY+DYQ M + EE+++ L + G + YQG +
Sbjct: 242 RNFRNEGIDHNHNPEFTMLEAYWAYADYQDMAALVEELLSGLVLHLFGTYQVPYQGRIVD 301
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
P+RR + +KE G+ F+ L DL+ LR D + + PS
Sbjct: 302 FTPPFRRISFVEALKEKAGLSFDPL--DLE-----RLRLFADAHHPE----LSGVPSY-K 349
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LL+++F + VEP+L PTFVLD+P+ ISPLAK HR GLTER++L+ G E+A A+SEL
Sbjct: 350 LLDKLFGLYVEPELWNPTFVLDFPLAISPLAKRHREKPGLTERWDLYAAGMELAPAYSEL 409
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DPLDQR R EQ ++ +E D+ + E D+DF+ ALEYGMP
Sbjct: 410 NDPLDQRERFLEQAKRR------------------REGDEEAPEP--DEDFLLALEYGMP 449
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA+G+GLG+DRL M+LT+ S+RDV+ FP+LK
Sbjct: 450 PAAGLGLGLDRLAMILTDQPSLRDVLLFPLLK 481
>gi|270292827|ref|ZP_06199038.1| lysine--tRNA ligase [Streptococcus sp. M143]
gi|406586850|ref|ZP_11061771.1| lysyl-tRNA synthetase [Streptococcus sp. GMD1S]
gi|419813996|ref|ZP_14338802.1| lysyl-tRNA synthetase [Streptococcus sp. GMD2S]
gi|270278806|gb|EFA24652.1| lysine--tRNA ligase [Streptococcus sp. M143]
gi|404472367|gb|EKA16795.1| lysyl-tRNA synthetase [Streptococcus sp. GMD2S]
gi|404473655|gb|EKA17985.1| lysyl-tRNA synthetase [Streptococcus sp. GMD1S]
Length = 496
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|421876956|ref|ZP_16308508.1| Lysyl-tRNA synthetase [Leuconostoc citreum LBAE C10]
gi|421879347|ref|ZP_16310816.1| Lysyl-tRNA synthetase [Leuconostoc citreum LBAE C11]
gi|372557263|emb|CCF24628.1| Lysyl-tRNA synthetase [Leuconostoc citreum LBAE C10]
gi|390446730|emb|CCF26936.1| Lysyl-tRNA synthetase [Leuconostoc citreum LBAE C11]
Length = 502
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/501 (46%), Positives = 328/501 (65%), Gaps = 35/501 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A +L ++Y + + E +E V +AGR++A+R GK+ F RD
Sbjct: 36 LDPFGKRFERTAKAQELHDLYDN-STLETLEAEQHEVVIAGRMIAKRGAGKVIFADFRDV 94
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L + + +K D+GD LG+ G + +TE GEL+VL LTK+L
Sbjct: 95 SGKIQVYAKRDDL-GENYPIIKR-ADLGDFLGIKGIIMKTEAGELTVLATELTHLTKALR 152
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG+ DV+ RYR+RY+D+I+ E F+ R+KI+S IR ++S F+EVETP+L
Sbjct: 153 PMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETPIL 212
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GGFE++YEIGRIFRNEG+ +H
Sbjct: 213 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNEGMDPKH 272
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +M+ TE I A V+ L + YQG EI L + R+ M +
Sbjct: 273 NPEFTTMETYAAYMDFTDVMDETEGIFKAAASVVSDDLKVTYQGTEIDLGSNFARKHMVD 332
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSVGNLLNEVFEIVVE 436
L+KE TGIDF + D+ V L DK V E VG+++N FE VE
Sbjct: 333 LIKEQTGIDFWQ---DMSVEAAQKLA--------DDKHVKYEKYWGVGHIINAFFEEFVE 381
Query: 437 PKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLE 496
LVQPTFV +P+E+SPLAK + + T+RFELFI G E NAF+EL DP+DQRAR E
Sbjct: 382 DTLVQPTFVYGHPVEVSPLAKRNAEDSRFTDRFELFIMGSEYGNAFTELNDPIDQRARFE 441
Query: 497 EQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDR 556
Q V+E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDR
Sbjct: 442 AQ-----------VAERENGNDEAE---------NIDEDFIEALEYGMPPTGGLGIGIDR 481
Query: 557 LVMLLTNSASIRDVIAFPILK 577
LVMLLT+S +IRDV+ FP ++
Sbjct: 482 LVMLLTDSDTIRDVLLFPTMR 502
>gi|289168135|ref|YP_003446404.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
gi|288907702|emb|CBJ22539.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
Length = 496
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 334/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L+ Y + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKNKYADF-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVEAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|326692382|ref|ZP_08229387.1| lysyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
Length = 493
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/500 (46%), Positives = 330/500 (66%), Gaps = 33/500 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A +L ++Y + + EE +E V +AGR++A+R GK+ F LRD
Sbjct: 27 LDPFGKRFERTAKAQELHDLYDN-SILEELEAEPHEVVIAGRMIAKRGAGKIIFADLRDV 85
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L D + +K D+GD LGV G M +TE GEL+VLV LTK+L
Sbjct: 86 SGKIQIYAKRDDL-GDNYPIIKR-ADLGDFLGVKGIMMKTEAGELTVLVTELTHLTKALR 143
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG+ DV+ RYR+RY+D+I+ + F+ R+KI+S IR ++S F+EVETP+L
Sbjct: 144 PMPDKFHGIADVETRYRKRYLDLIANEDSFKKFQLRSKIISAIRAYMDSQDFMEVETPIL 203
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GG+E++YEIGRIFRNEG+ +H
Sbjct: 204 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGYERVYEIGRIFRNEGMDPKH 263
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +M+ TE I A V+ L + YQG EI L + R+ M +
Sbjct: 264 NPEFTTMETYAAYMDFTDVMDETEGIFKAAAAVVSDDLKVTYQGTEIDLGSKFARKHMVD 323
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEP 437
L+KE TG+DF + D+ V L E+ K+ E VG+++N FE V
Sbjct: 324 LIKEQTGVDFWQ---DMSVEDAQKLAD-----EHHVKY--EKYWGVGHIINAFFEEFVGD 373
Query: 438 KLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEE 497
LVQPTFV +P+E+SPLAK + T+RFELFI G E NAF+EL DP+DQRAR E
Sbjct: 374 TLVQPTFVYGHPVEVSPLAKRNAEDPRFTDRFELFIMGSEYGNAFTELNDPIDQRARFEA 433
Query: 498 QVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRL 557
Q V+E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDRL
Sbjct: 434 Q-----------VAERENGNDEAE---------NIDEDFIEALEYGMPPTGGLGIGIDRL 473
Query: 558 VMLLTNSASIRDVIAFPILK 577
VMLLT+S +IRDV+ FP ++
Sbjct: 474 VMLLTDSDTIRDVLLFPTMR 493
>gi|373496359|ref|ZP_09586905.1| lysyl-tRNA synthetase [Fusobacterium sp. 12_1B]
gi|404368807|ref|ZP_10974155.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|313688099|gb|EFS24934.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|371965248|gb|EHO82748.1| lysyl-tRNA synthetase [Fusobacterium sp. 12_1B]
Length = 493
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/519 (46%), Positives = 334/519 (64%), Gaps = 38/519 (7%)
Query: 59 REAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAG 118
+E++ + KKVEEL+ G++P+ K+D+ + EI H + EN AG
Sbjct: 10 KESLVMEKWKKVEELKELGVKPFGSKFDKKYMVG---EILTH------TPEENLKYKTAG 60
Query: 119 RVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTE 178
R++A R GK F + D +G IQLY K+ L + F+ + + +GDI+GV G + T
Sbjct: 61 RIMAYRGKGKTLFAHIEDRTGRIQLYLRKDELGDEVFEMVNK-IGVGDIVGVEGELFVTH 119
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
GEL++ V S +L+K++ PLP+K+HGLTDV+ RYR+RYVD+I EV D F KR +I+
Sbjct: 120 TGELTLRVTSIQLLSKNIRPLPEKFHGLTDVETRYRKRYVDLIMNKEVRDTFIKRTQIIK 179
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR +++ GF+EVETP++ GGA A+PFVT+HN+L DLY+RIA EL+LKR+++GG
Sbjct: 180 GIRSILDNKGFLEVETPLMHPILGGAAAKPFVTHHNALNVDLYMRIAPELYLKRLIVGGL 239
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
EK+YE+GR FRNEG+STRHNPEFT IE+Y+AY+D+ MM++ EEI+T A V G T++
Sbjct: 240 EKVYELGRNFRNEGMSTRHNPEFTMIELYQAYADFNDMMDLAEEIITTLAKEVLGTTTVE 299
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
Y G + LE ++R M + VKE TG+DF + + AK AL + V +
Sbjct: 300 YNGKTLVLEN-FKRIHMVDFVKEVTGVDFWDQNMTFEEAK-----ALA---KQHHVEVAD 350
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
SVG+++N+ FE E K+VQPTFV +P+EISPLAK + T+RFELFI RE
Sbjct: 351 HMNSVGHVVNQFFEEKCEEKIVQPTFVFGHPVEISPLAKRNEEDPRFTDRFELFIDAREY 410
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP DQR R E+QV E+ + +D + V +DDDFV
Sbjct: 411 ANAFSELQDPADQRGRFEDQV------------------EEAERGNDEATPV-IDDDFVE 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRL+MLLT S SIRDV+ FP +K
Sbjct: 452 ALEYGLPPTGGMGIGIDRLIMLLTQSDSIRDVLLFPQMK 490
>gi|306490842|gb|ADM94962.1| lysyl-tRNA synthetase [uncultured candidate division JS1 bacterium]
Length = 497
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/517 (45%), Positives = 334/517 (64%), Gaps = 37/517 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA RIK++EELR KG++P+ ++ ++ E + +A+ EE +SE V +AGR+
Sbjct: 14 IRAERIKEIEELRKKGIDPFGRRFAGKQPIKEVIEKFDKIAS-EEPSSEK--VVIAGRIK 70
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
A R GK F L D +G +Q+Y + + D F+ K + +GDI+G++G + +T GE
Sbjct: 71 ALRKHGKAIFADLEDQTGKLQIYVKSNFIGVDSFEIFKK-ISVGDIVGITGLVFKTRTGE 129
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L+VL F +L K++ LP+K+HGLTD + RYR+RY+D+IS PE ++F +R+KI+ IR
Sbjct: 130 LTVLATLFSLLCKTIRTLPEKWHGLTDTELRYRKRYLDLISNPETRELFIERSKIIRYIR 189
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+++ G++EVETPVLQ GGA A PFVT+H SL RDLYL+IA EL+LKR+L+GG EK+
Sbjct: 190 DFLDNKGYLEVETPVLQPIPGGATATPFVTHHFSLHRDLYLKIAPELYLKRLLVGGMEKV 249
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+ R FRNEG+ST+HNPEFT +E+YEAY+DYQ MM I EE++ + G L I YQG
Sbjct: 250 YELNRNFRNEGISTKHNPEFTMLELYEAYADYQVMMEIAEEMICDILKKLKGNLIIQYQG 309
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNEL-GNDLKVAKETTLRALGDGLENKDKFVIESS 420
I PW++ TM+ +K TGI+ ++ DL + L N+ + +
Sbjct: 310 QNIDFTPPWKKLTMYEAIKLVTGINPQQVEEKDLSI------------LINQFQLEVPEK 357
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
+ G ++NE+FE VE LVQPTF+ DYPIE+SPL+K + L ERFELFI G E+AN
Sbjct: 358 ATKGEVINELFEKQVEHTLVQPTFITDYPIEVSPLSKQKPDNPHLVERFELFINGMEIAN 417
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP++Q+ R Q + +E + ++ +D D++ AL
Sbjct: 418 AFTELNDPIEQKRRFLLQAKNKSEGEI-----------------NQNF---IDYDYIEAL 457
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPPA GMG+GIDRLVMLLTN SIR+VI FP LK
Sbjct: 458 EYGMPPAGGMGVGIDRLVMLLTNRDSIREVILFPQLK 494
>gi|385837402|ref|YP_005875032.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
gi|358748630|gb|AEU39609.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
cremoris A76]
Length = 494
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/519 (45%), Positives = 326/519 (62%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+ LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMGNLRDAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG E
Sbjct: 186 IRRYMDGRGYLEVETPVLNNEAGGASARPFYTHHNSLDIDMALRIATELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR+FRNEG+ HNPEFTT+E YEAY+D++ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|339301771|ref|ZP_08650857.1| lysine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
gi|319744806|gb|EFV97146.1| lysine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
Length = 533
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/518 (45%), Positives = 335/518 (64%), Gaps = 41/518 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIY-----RHLANGEESNSENDHVSVAGR 119
+R +K+ L +G++P+ +++RT ++ QL E Y +L + EE+ ++AGR
Sbjct: 52 VRREKMAALTEQGIDPFGKRFERTATSGQLNEKYADKSKEYLHDIEET------ATIAGR 105
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+
Sbjct: 106 LMTKRGKGKVGFAHIQDREGQIQIYVRKDSVGEENYEIFKK-ADLGDFLGVEGQVMRTDM 164
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD++ YR+R++D+IS + D F R+KI+SE
Sbjct: 165 GELSIKATHITHLSKALRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISE 224
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++S GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E
Sbjct: 225 IRRFMDSNGFLEVETPVLHNEAGGASARPFITHHNAQDIDMVLRIATELHLKRLIVGGME 284
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YEIGRIFRNEG+ HNPEFT+IE Y+AY+DYQ +M++TE I+ H V G I+Y
Sbjct: 285 RVYEIGRIFRNEGMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINY 344
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG EI + P++R M + VKE TGIDF KE TL + K+ + +
Sbjct: 345 QGTEIKINEPFKRVHMVDAVKEITGIDF---------WKEMTLEEAQALAQEKNVPLEKH 395
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+VG+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E A
Sbjct: 396 FTTVGHIINAFFEEFVEDTLIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYA 455
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAF+EL DP+DQ +R E Q +SA+E DD + V D D+V A
Sbjct: 456 NAFTELNDPIDQLSRFEAQ---------------ASAKEL---GDDEATGV--DYDYVEA 495
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
LEYGMPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 496 LEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 533
>gi|322374407|ref|ZP_08048921.1| lysine--tRNA ligase [Streptococcus sp. C300]
gi|321279907|gb|EFX56946.1| lysine--tRNA ligase [Streptococcus sp. C300]
Length = 496
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDNRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|419782758|ref|ZP_14308556.1| lysine--tRNA ligase [Streptococcus oralis SK610]
gi|383182971|gb|EIC75519.1| lysine--tRNA ligase [Streptococcus oralis SK610]
Length = 496
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/515 (44%), Positives = 337/515 (65%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + D+ + + + K +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEE-------AKAIATEKKVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+
Sbjct: 363 GHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D D++ ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|397691538|ref|YP_006528792.1| lysyl-tRNA synthetase [Melioribacter roseus P3M]
gi|395813030|gb|AFN75779.1| lysyl-tRNA synthetase [Melioribacter roseus P3M]
Length = 502
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/525 (45%), Positives = 333/525 (63%), Gaps = 55/525 (10%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R ++++EL +G+ PYAY +D ++ +++ Y E V VAGR++A R
Sbjct: 17 RREELDELIKRGILPYAYSYDVDSYSSDIKQNY--------EKYEGKDVKVAGRIMALRR 68
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D G IQ+Y +K+ L + +D K+ +DIGDI+GV+G + +T+ GE+SV
Sbjct: 69 MGKATFAHIQDSRGRIQIYLKKDEL-GEMYDVFKL-LDIGDIIGVAGFVFKTKTGEISVH 126
Query: 186 VNSFVILTKSLLPLPDK------------YHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
S+ +L+KSL P+P Y D + RYRQRYVD+I PEV DVF KR
Sbjct: 127 AKSYQLLSKSLRPIPIAKEVIDENGNKIVYDQFADKELRYRQRYVDLIVNPEVKDVFIKR 186
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A+I+++IRK ++ G +EVETP+LQ GGA ARPF+T+HN+L DLYLRIA EL+LKR+
Sbjct: 187 AQIITQIRKYLDENGLIEVETPILQPLYGGAAARPFITHHNALDIDLYLRIADELYLKRL 246
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGF+ +YEI + FRNEG+ HNPEFT +E+Y AY DY+ MM+ E++V V G
Sbjct: 247 IVGGFDGVYEISKDFRNEGMDKTHNPEFTMLELYVAYKDYEWMMDFVEKMVVELCNKVFG 306
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD-GLENK 412
+G EI PW+R +M + + E TGID LK + + ++AL + G+E K
Sbjct: 307 TTQFVIEGKEINFNPPWKRVSMVDKLLEVTGIDV------LKASYDELVKALKERGVEPK 360
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
S G L++E+FEI ++ L+QPTFV+DYP+E+SPLAK HR GL ERFE F
Sbjct: 361 ------GGESKGKLIDELFEITIQASLIQPTFVIDYPLELSPLAKKHRSKEGLVERFEGF 414
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
+ GRE+ NAFSEL DP+DQR R EEQ + +E D+ ++++
Sbjct: 415 VLGREICNAFSELNDPIDQRKRFEEQAKMR------------------EEGDEEAHQI-- 454
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALEYGMPP +G+G+GIDRLVMLLTN SIRDVI FP +K
Sbjct: 455 DEDFIRALEYGMPPTAGLGVGIDRLVMLLTNQPSIRDVILFPQMK 499
>gi|296328451|ref|ZP_06870972.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296154417|gb|EFG95214.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 493
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/520 (44%), Positives = 336/520 (64%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDK---QIMIGDILKH------KPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV + F KR KI+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
IRK ++ GF+EVETP++ GGA A+PF+T+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFNDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVQLSL-KNFNRVHMVDMIKEVTGVDF---------WKEMTFEEAKKLAKEHHVEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV +E ++ +++ + E+ D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFEAQV-----------------EEAMRGNEEATPEI--DESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|154505279|ref|ZP_02042017.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
gi|153794477|gb|EDN76897.1| lysine--tRNA ligase [Ruminococcus gnavus ATCC 29149]
Length = 655
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/523 (44%), Positives = 337/523 (64%), Gaps = 40/523 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K+ +L++ G +P+ K+D+TH + +++E + LA E VS+
Sbjct: 22 DLNQLRKVRREKLADLQANGKDPFVITKYDQTHHSLEIKENFEELAGKE--------VSI 73
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F ++D G IQ Y ++ + + + + K +D+GD++G++G +
Sbjct: 74 AGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEAYKEFKK-MDVGDVIGITGEVFE 132
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE S+ +S +L+KSL LP+K+HGLT+ D RYRQRYVD+I P+V F R+KI
Sbjct: 133 TKTGEKSIHASSVTLLSKSLQILPEKFHGLTNTDIRYRQRYVDLIMNPDVKQTFINRSKI 192
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++G
Sbjct: 193 LSAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALDEDFKLRISLELYLKRLIVG 252
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 253 GMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTV 312
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I+Y GV++ L +P+ R TM + VK+ G+D+NE+ ET +A E+ +F
Sbjct: 313 IEYNGVQMDLGKPFERITMVDAVKKYAGVDWNEV--------ETLEQARALAKEHHVEF- 363
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++L FE E L+QPTFV+D+PIEISPL K + TERFE F+ G
Sbjct: 364 -EERHKKGDILALFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGW 422
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + Q +E L + DD + T D+DF
Sbjct: 423 EMANAYSELNDPIDQRERFKAQ------------------EELLAQGDDEAN--TTDEDF 462
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+ ALE GMPP G+G GIDR+ MLLTNSA+IRDV+ FP +K Q
Sbjct: 463 LNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFPTMKSQ 505
>gi|319938836|ref|ZP_08013200.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
gi|319811886|gb|EFW08152.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
Length = 495
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/514 (45%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMVALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF KE TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKEMTLEE-ATALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|414073670|ref|YP_006998887.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris UC509.9]
gi|413973590|gb|AFW91054.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 494
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/519 (45%), Positives = 326/519 (62%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+ LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMGNLRDGGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG E
Sbjct: 186 IRRYMDGRGYLEVETPVLNNEAGGASARPFYTHHNSLDIDMALRIATELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR+FRNEG+ HNPEFTT+E YEAY+D++ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|421525824|ref|ZP_15972434.1| lysyl-tRNA synthetase [Fusobacterium nucleatum ChDC F128]
gi|402258393|gb|EJU08865.1| lysyl-tRNA synthetase [Fusobacterium nucleatum ChDC F128]
Length = 493
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/520 (44%), Positives = 339/520 (65%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++ + K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESNGVKAFGKKYDK---QIMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGIEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV + F KR KI+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
++K ++++GF+EVETP++ GGA A+PF+T+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KGVKKYLDNIGFLEVETPIMHPILGGAAAKPFITHHNTLNLDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHADFNDMMDLCEGIISTVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++K+ TG+DF KE T + V
Sbjct: 300 EYDGVKLSL-KNFARVHMVDMIKDVTGVDF---------WKEMTFEEAKQIAKEHHVEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
E SVG+++NE FE E ++VQPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 EHMNSVGHIINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEANPKFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV +E ++ +++ + E+ D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFEAQV-----------------EEAMRGNEEATPEI--DESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|225569856|ref|ZP_03778881.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
15053]
gi|225161326|gb|EEG73945.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
15053]
Length = 646
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/521 (46%), Positives = 332/521 (63%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K++EL+ G +PY +++ T A ++E Y + E HVSV
Sbjct: 12 DLNQLRKVRREKLKELQENGKDPYQVMRYEATVHAADIKENYDEM--------EGKHVSV 63
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGRV+ +R GK +F + D SG IQ Y ++ L + + + K +DIGDI+G+ G + +
Sbjct: 64 AGRVMQKRVMGKASFCNVLDQSGNIQSYVARDSLGEEAYKEFKK-LDIGDIVGLEGEVFK 122
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ + +L+KSL LP+K+HGLT+ D RYRQRYVD+I PEV D F KR+ I
Sbjct: 123 TKTGEISIHATAVKLLSKSLQILPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTFIKRSHI 182
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++G
Sbjct: 183 ISAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALSEDFKLRISLELYLKRLIVG 242
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G EK+YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G T
Sbjct: 243 GLEKVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTT 302
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I Y GVE+ L +P+ R TM + VK+ G+D+NE+ + L+ A RAL D K
Sbjct: 303 IVYNGVEMDLGKPFERITMIDAVKKYAGVDWNEV-HTLEEA-----RALAD----KHHVE 352
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++L+ FE E L+QPTFV+D+PIEISPL K ERFE F+ G
Sbjct: 353 YEDRHKKGDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPEDPEYVERFEFFMNGW 412
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R Q +E L + D+ + T D+DF
Sbjct: 413 EMANAYSELNDPIDQRERFRAQ------------------EELLAQGDEEAN--TTDEDF 452
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+ ML+T+SA+IRDV+ FP +K
Sbjct: 453 LNALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFPTMK 493
>gi|339441814|ref|YP_004707819.1| hypothetical protein CXIVA_07500 [Clostridium sp. SY8519]
gi|338901215|dbj|BAK46717.1| hypothetical protein CXIVA_07500 [Clostridium sp. SY8519]
Length = 641
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/513 (45%), Positives = 328/513 (63%), Gaps = 40/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K L+ G +P+ K+D+TH + ++++ Y L E VSVAGR++ +R
Sbjct: 18 RREKFANLQQAGKDPFVITKYDQTHHSQEIKDRYDEL--------EGREVSVAGRMMFKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F +RD G IQ Y ++ + + + K + DIGDI+G+ G++ +T+ GE+SV
Sbjct: 70 VMGKASFCNVRDKQGDIQAYVARDEIGEESYADFKKY-DIGDIIGIRGTVFKTKTGEISV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +L KSL LP+K+HGLTD D RYRQRYVD+I P+V D F KR++I+ EIR +
Sbjct: 129 HASEVTLLAKSLQVLPEKFHGLTDTDTRYRQRYVDLIMNPDVRDTFIKRSQIIKEIRNFL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ + F+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+LKR+++GG E++YEI
Sbjct: 189 DGMDFMEVETPMLVSNAGGAAARPFETHYNALNEDVKLRISLELYLKRLIVGGLERVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE++ + A V G TI Y G I
Sbjct: 249 GRVFRNEGVDTRHNPEFTLMELYQAYTDYNGMMDLTEKMFRYLAEKVCGTTTITYNGTAI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L +P+ R TM + VK+ G+DFN + D +E A G+E E+ G
Sbjct: 309 DLGKPFERLTMIDAVKKYAGVDFNTIQTD----EEARAIAKEKGVE------FEAHHVRG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++++ FE E L+QP F++D+PIEISPL K L ERFELFI GREMANA+SE
Sbjct: 359 DIISLFFEEFCEENLIQPVFIMDHPIEISPLTKKKPSDPSLVERFELFIYGREMANAYSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R + AQ+ L E+ D + T D+DF+ ALE GM
Sbjct: 419 LNDPIDQRERFK-------------------AQDALAEAGDEEAQHT-DEDFLNALEIGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G GIDRLVMLLT+S +IRDV+ FP +K
Sbjct: 459 PPTGGIGYGIDRLVMLLTDSPAIRDVLLFPTMK 491
>gi|397781646|ref|YP_006546119.1| lysyl-tRNA synthetase [Methanoculleus bourgensis MS2]
gi|396940148|emb|CCJ37403.1| lysyl-tRNA synthetase [Methanoculleus bourgensis MS2]
Length = 503
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/523 (44%), Positives = 325/523 (62%), Gaps = 34/523 (6%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
S D +I K+++L +G+ Y YK++RT + ++++E + + G E ++ D V
Sbjct: 2 SDMDHLCFDTTKIDKIQDLLERGVTVYPYKFERTDTIDEIKERFSDI--GHEKSA--DEV 57
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
S AGRV R GK F + D G IQLY K L ++F+ + ++D GDI+GV G +
Sbjct: 58 STAGRVYVVRQHGKTIFADIGDSDGRIQLYLRKNDLGEEEFNLFRQYIDAGDIIGVVGHV 117
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
RT+ GE+++ V+ F +L KS+ PLP+K+HGL +++ RYRQRY+D+I E + FR R+
Sbjct: 118 FRTKMGEITIWVDRFELLAKSVCPLPEKFHGLKNIETRYRQRYLDLIMNEESRETFRTRS 177
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
+I+S +R+ + ++E ETP LQ GGA ARPF TYHN L + LYLRIA EL+LKR++
Sbjct: 178 RIISLLRQFLFERDYLEFETPTLQPIYGGANARPFTTYHNYLDQKLYLRIAPELYLKRLV 237
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFEK++EI + FRNE + T HNPEF+ +E+YEAY DY MM++TEEI+ H V+G
Sbjct: 238 VGGFEKVFEIAKNFRNEDIDTNHNPEFSMVEIYEAYQDYNDMMDLTEEIMAHLVEEVHGG 297
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
T+ + G E+ + RPWRR TM V+E GI D++ LRA D
Sbjct: 298 STLSFAGHELDVTRPWRRLTMEEAVQEYAGI-------DVRAHTVDELRAFA---REHDV 347
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
E + + G L FE E L+QPTFV D+PIE SPLAK HR GLTERFELFI
Sbjct: 348 EGYEDATTWGEFLALFFEHFGEEHLIQPTFVYDFPIENSPLAKKHREKEGLTERFELFIA 407
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
G EMAN FSEL DPLDQ+ARLEEQ A + + ++ +D
Sbjct: 408 GMEMANGFSELNDPLDQKARLEEQ---------DARRRRGDLEAQM-----------IDY 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ AL YGMPP G+G+GIDRLVMLLT + SI++V+ FP +K
Sbjct: 448 DFINALGYGMPPTGGVGIGIDRLVMLLTGNESIKEVLLFPQMK 490
>gi|421144367|ref|ZP_15604281.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395489161|gb|EJG10002.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 493
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/520 (44%), Positives = 330/520 (63%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDK---QIMIGDILKH------KPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ + +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDEIGEEQFDHIVKMLNVGDIIGLEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV + F KR KIV
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKIV 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
IRK ++ GF+EVETP++ GGA A+PF+T+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVKLSL-KNFARVHMVDMIKEVTGVDF---------WKEMTFEEAKQIAKEHHIEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV + A E +D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFESQVEEAMHGNEEATPE-------------------IDESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP G+G+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|326203393|ref|ZP_08193258.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
gi|325986651|gb|EGD47482.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
Length = 499
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/529 (45%), Positives = 337/529 (63%), Gaps = 44/529 (8%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNSE 110
+ S D + +R K+++L+ K +P+ K+D T+S + + + E
Sbjct: 9 NQQSEEDLSEILRVRRAKLKDLQDKDCDPFKIVKYDVTNSTKNIIDNFEA--------QE 60
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
S+AGR++++R GK F L+D G IQLY K+ + + ++ K + DIGDI+GV
Sbjct: 61 GQTASIAGRLMSKRGMGKAGFCDLQDRDGKIQLYVRKDEVGDEVYEMFKKY-DIGDIVGV 119
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + +T KGE+S+ V +L+KSLLPLP+K+HGL D D RYRQRYVD+I PEV + F
Sbjct: 120 KGEIFKTHKGEISIKVKEITLLSKSLLPLPEKWHGLKDTDLRYRQRYVDLIVNPEVKNTF 179
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
R+KI+ IRK +++ GF+EV+TP+L GGA ARPFVT+HN+L D+YLRIA EL+L
Sbjct: 180 ILRSKIIKSIRKFLDNRGFLEVDTPLLNTIPGGATARPFVTHHNTLDIDMYLRIAPELYL 239
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG EK+YE+GR+FRNEG+S +HNPEFT +E+YEAY+DY+ MM +TE +++ A+
Sbjct: 240 KRLIVGGMEKVYEMGRMFRNEGMSVKHNPEFTMMEVYEAYNDYKGMMELTENLISTVAME 299
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND--LKVAKETTLRALGDG 408
G I YQG +I L PW R TM VK+ +GIDF+ + D K A E+ + +G
Sbjct: 300 TLGTTKIQYQGQDIDLTPPWNRMTMIEAVKKFSGIDFDTIKTDEEAKAAAESKKVHVKEG 359
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+ G +LN +FE VE LVQPTF+ DYP+EISPL K LTER
Sbjct: 360 MVR------------GEILNLMFEEFVESNLVQPTFIYDYPVEISPLTKRKPNCPELTER 407
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FE FI GREM NA+SEL DP+DQ+ R QV+ KR + E +
Sbjct: 408 FEFFITGREMGNAYSELNDPIDQKDRFISQVK----KRDSGDEEAN-------------- 449
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DDD+VTALEYGMPP G+G+G+DRL++LLT+SASIRD++ FP +K
Sbjct: 450 --MMDDDYVTALEYGMPPTGGLGIGVDRLIILLTDSASIRDIMLFPTMK 496
>gi|313115333|ref|ZP_07800808.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622364|gb|EFQ05844.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 503
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/534 (43%), Positives = 335/534 (62%), Gaps = 42/534 (7%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
+ + + S+ E V+ +R +K+ +L++ G +P+ K+ + + L+ + L N +
Sbjct: 4 QKKNPAQGLSESEQVQ-VRRQKLADLQAAGHDPFTLTKYPQDAYSADLKAEFADLPNETD 62
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
S V++AGR++++R GK +F LRDD G IQLY ++ L + + K +D+GD
Sbjct: 63 SGKT---VALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGEEPYAAFKK-LDVGD 118
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+GV G + RT+ GELSV +L KSL PLP+K+HGLTD + RYRQRYVD+I+ PEV
Sbjct: 119 IIGVKGEVFRTKTGELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDLIANPEV 178
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
D F KR++I+ EIR ++ GF+EV+TP+L GA ARPF T+HNSL D+ LRI T
Sbjct: 179 KDTFVKRSQILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNSLNMDMVLRIET 238
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
EL+LKR+++GG +++YE+GRIFRNEG+ +HNPEFT+IE+Y+A++D+ MM++ EE+
Sbjct: 239 ELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNPEFTSIELYQAFTDFHGMMDLVEELYKR 298
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLR 403
A + G + I YQG +I + W R TM VK+ +G+DFN+ +D + AKE +
Sbjct: 299 LAQKICGSMVIPYQGKQIDMGH-WERLTMVEAVKKYSGVDFNDWKSDEDAIAAAKEHHVE 357
Query: 404 ALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHA 463
+ P+ G++L E F+ VE KL+QPTF+ DYP+EISPLAK
Sbjct: 358 -------------LPEVPTKGSILAEFFDAFVEDKLIQPTFIYDYPVEISPLAKRKPDDP 404
Query: 464 GLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES 523
TERFE FI E NAFSEL DP+DQ+ R E QV + A+ AQ
Sbjct: 405 AFTERFEYFIDCTEYGNAFSELNDPIDQKGRFERQVAERK-----AIEPDCKAQ------ 453
Query: 524 DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYG+PP G+G G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 454 --------VDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFPTMK 499
>gi|19703801|ref|NP_603363.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|39932224|sp|Q8RG52.1|SYK_FUSNN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|19713947|gb|AAL94662.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 493
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/520 (44%), Positives = 336/520 (64%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++P+ K+D+ + +I +H EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDK---QIMIGDILKH------KPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV + F KR KI+
Sbjct: 120 HTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
IRK ++ GF+EVETP++ GGA A+PF+T+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ +NG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFNDMMDLCEGIISSVCQEINGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++KE TG+DF KE T + V
Sbjct: 300 EYDGVQLSL-KNFNRVHMVDMIKEVTGVDF---------WKEMTFEEAKKLAKEHHVEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 DHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV +E ++ +++ + E+ D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFEAQV-----------------EEAMRGNEEATPEI--DESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|358464831|ref|ZP_09174789.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 058 str. F0407]
gi|357066360|gb|EHI76510.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 058 str. F0407]
Length = 496
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 336/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|153952825|ref|YP_001393590.1| lysyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219853490|ref|YP_002470612.1| hypothetical protein CKR_0147 [Clostridium kluyveri NBRC 12016]
gi|189082956|sp|A5N4L1.1|SYK_CLOK5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|146345706|gb|EDK32242.1| LysS [Clostridium kluyveri DSM 555]
gi|219567214|dbj|BAH05198.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 502
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 328/516 (63%), Gaps = 37/516 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
RI+K + L+ + +P+ YK +RTH++ ++++ Y L + V+VAGR++++R
Sbjct: 22 RIQKFKNLQEQNKDPFEVYKVERTHTSKEIKDNYETL--------DGTDVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L D G IQLY + + ++ + K + DIGDIL VSG + +T GE+S+
Sbjct: 74 VHGKAGFSDLYDRYGKIQLYIKINDVGEEKLKEYKSY-DIGDILSVSGKVFKTRTGEVSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F + KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR ++ IR+ +
Sbjct: 133 HITDFQLAAKSLKPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFLKRTAVIRAIREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DGRDYIEVETPILSSIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT +E+YEA+SDY MM +TE ++ + V G + YQ EI
Sbjct: 253 GKNFRNEGIDVRHNPEFTAMELYEAFSDYNDMMELTENMLAYVCEKVLGTTKVIYQDTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PW R TM + VK+ T +DFNE+ +D + K + + E KD + G
Sbjct: 313 DFKPPWNRITMVDAVKQFTKVDFNEVESDDEARKIAVEKNIELKKELKD-------CTKG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++L +FE E K +QPTFV+DYP+EISPL K R + TERFE FI GRE+ NA+SE
Sbjct: 366 DILVGMFEEFCEHKFIQPTFVMDYPVEISPLTKKKRGNDKYTERFEGFIFGREVCNAYSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ QR R +Q+R+ + DD +Y +D+DF+ ALE GM
Sbjct: 426 LNDPIVQRERFMQQIRER------------------ELGDDEAY--MMDEDFINALEIGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+G+DR++M LTNS SIRDVI FP +K Q
Sbjct: 466 PPTGGLGIGLDRIIMFLTNSYSIRDVILFPTMKPSQ 501
>gi|340399127|ref|YP_004728152.1| Lysyl-tRNA synthetase [Streptococcus salivarius CCHSS3]
gi|338743120|emb|CCB93628.1| Lysyl-tRNA synthetase [Streptococcus salivarius CCHSS3]
Length = 496
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|418964986|ref|ZP_13516773.1| lysine--tRNA ligase [Streptococcus constellatus subsp. constellatus
SK53]
gi|383343819|gb|EID21991.1| lysine--tRNA ligase [Streptococcus constellatus subsp. constellatus
SK53]
Length = 495
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR++ +R
Sbjct: 15 IRREKMTALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF KE TL L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---------WKEMTLEE-ATALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLA+ + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLARKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|210623237|ref|ZP_03293676.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
gi|210153774|gb|EEA84780.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
Length = 508
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/542 (43%), Positives = 339/542 (62%), Gaps = 51/542 (9%)
Query: 42 AGTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRH 100
+ +N A+ TS E ++ +R K+ L+ G +P+ ++DRTH + Q++E +
Sbjct: 2 SNNKNTEANVEMTSEELSEVLQ-VRRDKLANLQEMGRDPFKESRYDRTHYSVQVKEGFEA 60
Query: 101 LANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKV 160
L E + V +AGR++++R GK F+ ++D G IQ Y K+RL +++ K
Sbjct: 61 L--------EGETVKIAGRMMSKRIQGKAGFIDIQDAEGRIQSYVRKDRLGDEEYTIFKT 112
Query: 161 FVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDM 220
+ DIGDI+G+ G + T++GE+SV + +L+KSL LP+KYHGL D + RYRQRYVD+
Sbjct: 113 Y-DIGDIVGIEGEVFITKRGEISVKADKVTLLSKSLQILPEKYHGLKDQELRYRQRYVDL 171
Query: 221 ISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDL 280
I PEV D F R K + +R ++ GF+EVETP+L AGGA ARPF+T+HN+L +
Sbjct: 172 IVNPEVKDAFITRTKALKALRSYLDERGFLEVETPILNTIAGGANARPFITHHNTLHIPM 231
Query: 281 YLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNIT 340
YLRIA EL+LKR+++GGF+K+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+D+ MM I
Sbjct: 232 YLRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNPEYTAIELYQAYADFTDMMEIA 291
Query: 341 EEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVA 397
E ++ H A G + YQG EI + PW+R TM VKE +G+DFNE+ D + +A
Sbjct: 292 ENLIAHMAEVATGSTKVVYQGKEIDFKPPWKRMTMIECVKEYSGVDFNEINTDEEAIAIA 351
Query: 398 KETTLRALGDGLENKDKFVIESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPL 455
KE IE P + G ++ E FE E KLVQPTF+ +P+EISPL
Sbjct: 352 KEKG---------------IEVKPGMRRGEIIAEFFEEFGEDKLVQPTFITHHPVEISPL 396
Query: 456 AKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSS 515
+K + LT+RFE F G E+ANAFSEL DP+DQ+ R +Q+R
Sbjct: 397 SKRNNEDPRLTDRFEAFANGWELANAFSELNDPIDQKGRFMDQLR--------------- 441
Query: 516 AQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPI 575
K + DD + + +D+DF+ ALE G+PP G+G+GIDR++MLLT+S SIRDV+ FP
Sbjct: 442 ---KKELGDDEACD--MDEDFLNALEVGLPPTGGLGIGIDRVIMLLTDSTSIRDVLLFPT 496
Query: 576 LK 577
+K
Sbjct: 497 MK 498
>gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 633
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 341/513 (66%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
L+ K++ELR +G +P+ + S ++ +I + ++ EE + V VAGR++++R
Sbjct: 13 LKRNKLKELRERGEDPFLIESYPVDSYSK--DIKDNFSDFEEKD-----VVVAGRIMSKR 65
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+AFL L+D GTIQ++ K+ ++++ +D +K +DIGDI+GV G + +TE GE++V
Sbjct: 66 RHGKIAFLDLQDSRGTIQIFLRKD-VMNEGYDVIKD-IDIGDIVGVKGKVFKTEAGEITV 123
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+L+KSL LP+K+HGL D++ RYR RYVD+I PEV DVF KR+KI+ I++ +
Sbjct: 124 RATEASLLSKSLQILPEKFHGLKDIELRYRMRYVDLIVNPEVKDVFIKRSKIIKAIKEYL 183
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP+L AGGA A+PF+T+HN+L D+ +RIA EL+LKR+++GGF+K+YE+
Sbjct: 184 DERGFLEVETPILGSVAGGANAKPFLTHHNTLDMDMQMRIANELYLKRLIVGGFDKVYEL 243
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G++FRNEG+S RHNPEFT IE+Y+AY DY+ MM ITE I + A V G I+YQG EI
Sbjct: 244 GKMFRNEGISPRHNPEFTNIELYQAYVDYEEMMRITEGIFEYVAKKVLGTTKINYQGKEI 303
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ PWRR TM + + E G+DFNE+ D +E A GLE K+ + G
Sbjct: 304 ELKAPWRRITMIDAINEYAGVDFNEINTD----EEAREIAKAKGLEVDPKW------TRG 353
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++++E+FE E LVQPTFV +P+E+SPLAK LT+RFE F+ E+ANAFSE
Sbjct: 354 HVISEMFEEFCESHLVQPTFVTKHPVEVSPLAKRDPEDPRLTQRFEAFMNTWELANAFSE 413
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ+R+ + DD ++ +D DF+ A+E G+
Sbjct: 414 LNDPIDQRERFEEQLREK------------------EMGDDEAH--PMDTDFLNAIEVGL 453
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DR++M+L + +IRD+I FP +K
Sbjct: 454 PPTGGLGIGVDRMIMILLDQPTIRDIIFFPTMK 486
>gi|406577223|ref|ZP_11052839.1| lysyl-tRNA synthetase [Streptococcus sp. GMD6S]
gi|404460230|gb|EKA06506.1| lysyl-tRNA synthetase [Streptococcus sp. GMD6S]
Length = 496
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKVVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|148997215|ref|ZP_01824869.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|168575371|ref|ZP_02721307.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|307067319|ref|YP_003876285.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
gi|419470678|ref|ZP_14010537.1| lysine--tRNA ligase [Streptococcus pneumoniae GA07914]
gi|419503528|ref|ZP_14043199.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47760]
gi|421238351|ref|ZP_15694920.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2071247]
gi|421244543|ref|ZP_15701046.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2081685]
gi|421313890|ref|ZP_15764480.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47562]
gi|147756915|gb|EDK63955.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|183578679|gb|EDT99207.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|306408856|gb|ADM84283.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
gi|379545394|gb|EHZ10533.1| lysine--tRNA ligase [Streptococcus pneumoniae GA07914]
gi|379609126|gb|EHZ73867.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47760]
gi|395602938|gb|EJG63079.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2071247]
gi|395610201|gb|EJG70280.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 2081685]
gi|395914390|gb|EJH25234.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47562]
Length = 496
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR+V +R
Sbjct: 15 VRREKMAALCEQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIREITGVDFWQ---DMTLEEAKVIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|427405749|ref|ZP_18895954.1| lysine-tRNA ligase [Selenomonas sp. F0473]
gi|425708590|gb|EKU71629.1| lysine-tRNA ligase [Selenomonas sp. F0473]
Length = 496
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 329/513 (64%), Gaps = 35/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R G+ P+ ++++ T A +++ Y +L EE V +AGR++A R
Sbjct: 15 VRREKMDAFREMGVAPFGHRFEVTDYAAEIRAKYDYLGEDEEGGE----VRIAGRLMAIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F TL D +G +Q+Y +++ L ++ + +DIGDI+G+ G + +T +GE++V
Sbjct: 71 GHGKASFCTLNDRTGNVQIYFKQDILGEKKYKEEFCRLDIGDIIGIRGVVFKTRRGEVTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV D FRKR KI+ +R +
Sbjct: 131 RVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNHEVRDTFRKRGKIIQSVRNYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL LKR+++GG +++YE+
Sbjct: 191 DERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLYLRIATELSLKRLIVGGLDRVYEM 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ RHNPEFT+IE+Y+A+ DY+ +M ITE IV A V G I YQGV+I
Sbjct: 251 GRIFRNEGMDVRHNPEFTSIEIYQAFGDYRDLMEITEGIVRRAAEDVLGTTKITYQGVDI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L +M++ V+EATG DF L RA+ + E +G
Sbjct: 311 DLGTVC-TVSMNDAVREATGKDF------LSCKTVDEARAMAKEI----GVPFEERHGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE +LVQPTF+ +P EISPLAK + A +T+RFE FI GRE+AN F+E
Sbjct: 360 GILNAAFEEKVEERLVQPTFITGHPTEISPLAKRNPDDARITDRFEFFIYGRELANGFTE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R EQ+ Q +E+ D V +D D+VTALEYG+
Sbjct: 420 LNDPIDQEQRFIEQLAQ-------------------REAGDGEAHV-MDRDYVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 460 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 492
>gi|55820759|ref|YP_139201.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55736744|gb|AAV60386.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
Length = 511
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 30 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHEINETATIAGRLMTKR 88
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 89 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEIMRTDMGELSI 147
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+D++ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 148 KATHITHLSKALRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 207
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 208 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 267
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFTTIE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 268 GRVFRNEGMDATHNPEFTTIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 327
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 328 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 378
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 379 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 438
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 439 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 478
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 479 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 511
>gi|55822661|ref|YP_141102.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|55738646|gb|AAV62287.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
Length = 511
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 30 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYAD-KTKEELHEINETATIAGRLMTKR 88
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 89 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEIMRTDMGELSI 147
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+D++ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 148 KATHITHLSKALRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 207
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 208 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 267
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFTTIE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 268 GRVFRNEGMDATHNPEFTTIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 327
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 328 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLEEAKAVAA------EKNVPVEKHYTEVG 378
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 379 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 438
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 439 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 478
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 479 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 511
>gi|227512327|ref|ZP_03942376.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
gi|227084502|gb|EEI19814.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
Length = 501
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 327/513 (63%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR +G++P+ +++ RT+ A QL + + + N N V+VAGR++A+R
Sbjct: 13 VRRQKMDELRKEGIDPFGHRFQRTYLATQLHDEFDKTDKDDLMNL-NKKVTVAGRMMAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G IQ+Y K+ + D + K DIGD LG+SG + +T+ GEL+V
Sbjct: 72 GKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKR-SDIGDHLGISGQIIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDK+HGL D +++YRQRY+D+IS + D F KR+ I++ IR +
Sbjct: 131 RAESVTFLSKALRPLPDKWHGLQDKEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S ++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I A V I YQG I
Sbjct: 251 GRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKTVTDDGMITYQGHTI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L++P++R+ M + +KE TGIDF + L ++ E G
Sbjct: 311 DLDKPFKRQHMVDAIKEYTGIDF----------WKPMDDDDAKKLADEHHIHYEPWWKTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE +V+PKL QPTF+ +P+EISPLAK + T+RFEL+I E ANAF+E
Sbjct: 361 HIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNAEDPRFTDRFELYILTNEFANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ E A +D+D++ ALEYGM
Sbjct: 421 LNDPIDQRQRFEAQVKERQEGNDEAEG--------------------IDEDYIEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493
>gi|427413903|ref|ZP_18904094.1| lysine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714944|gb|EKU77943.1| lysine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 514
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/515 (44%), Positives = 333/515 (64%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ + + G+ P+ ++ A +++ +R E+ V+VAGR++ R
Sbjct: 22 IRREKLAQYEADGVYPFGQRFVVQQHAATIKDNFRDF--------EDQPVTVAGRLMTIR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD +G IQ+Y K+ L D + +K+ +D+GDI+G+ G + RT GE+++
Sbjct: 74 SHGKTAFANIRDLTGDIQIYLRKDILGEDDYKHVKM-LDMGDIVGIEGHVFRTHMGEITI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR +IV+++R+ +
Sbjct: 133 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFIKRTQIVAKMRQYM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETP+L GGA ARPF+T+HN+L D+Y+RI+ ELHLKR+++GG E+++EI
Sbjct: 193 NAHQFMEVETPMLHAIPGGAAARPFITHHNALDIDIYMRISPELHLKRLIVGGLERVFEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFT +E Y+AY +++ + +TE IV +CA V G I+YQG EI
Sbjct: 253 NRSFRNEGIDNRHNPEFTMMESYQAYGNFEDAIMLTENIVAYCAQEVLGTTKINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETT--LRALGDGLENKDKFVIESSPS 422
L PW R TM +K+ TG DF+ A ET RA+ D L +
Sbjct: 313 DLTPPWNRITMQEGIKKYTGEDFD--------AVETIEEARAIADRLNVE----YTERDG 360
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
+G ++N FE VE L++PT V +P+EISPLAK +R TERFE F+ GRE+AN +
Sbjct: 361 IGKIINLCFEDYVEENLIEPTIVYGHPLEISPLAKQNREKPLTTERFEAFVYGRELANGY 420
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R E+Q+++ RAA DD ++ +D+DFV ALEY
Sbjct: 421 SELNDPIDQRQRFEKQLQE----RAAG--------------DDEAHR--MDEDFVIALEY 460
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 461 GLPPTAGLGIGIDRLVMFLTDSASIRDVLLFPLMK 495
>gi|386086376|ref|YP_006002250.1| lysyl-tRNA synthetase [Streptococcus thermophilus ND03]
gi|387909469|ref|YP_006339775.1| lysyl-tRNA synthetase [Streptococcus thermophilus MN-ZLW-002]
gi|312278089|gb|ADQ62746.1| Lysyl-tRNA synthetase [Streptococcus thermophilus ND03]
gi|387574404|gb|AFJ83110.1| Lysyl-tRNA synthetase [Streptococcus thermophilus MN-ZLW-002]
Length = 496
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRVFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLEEAKVIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFESQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|419780250|ref|ZP_14306100.1| lysine--tRNA ligase [Streptococcus oralis SK100]
gi|383185409|gb|EIC77905.1| lysine--tRNA ligase [Streptococcus oralis SK100]
Length = 496
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + + E TG+DF + D+ + + A K V + VG
Sbjct: 313 RINEPFKRVHMVDAINEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDDRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|342214747|ref|ZP_08707421.1| lysine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341590719|gb|EGS33953.1| lysine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 506
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/513 (44%), Positives = 335/513 (65%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ + + P+ ++ H A Q+++ +R + V +AGR++ R
Sbjct: 19 VRREKLAQYEEDNIYPFGQRFVVQHKALQIKDEFRDF--------DGQPVVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF LRD SG IQ+Y K+ + + + +K+ +D+GDI+G+ G + +T+KGE++V
Sbjct: 71 SHGKTAFANLRDLSGDIQVYFRKDVMGEEDYKYVKM-LDMGDIVGIEGHVFKTQKGEITV 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I P V D F KR KIV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPSVRDTFVKRTKIVAKIREYL 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
S F+EVETP++ GGA ARPF+T+HN+L D+Y+RI+ EL+LKR+++GG E++YEI
Sbjct: 190 NSKQFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRISPELYLKRLIVGGLERVYEI 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+S RHNPEFT +E Y+AY +++ + +TE +V++CA V G I+YQG++I
Sbjct: 250 NRSFRNEGVSIRHNPEFTMMESYQAYGNFEDAIALTEGVVSYCAQEVLGTTKINYQGMDI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM +K+ TG DF+ + + RA+ D L + + +G
Sbjct: 310 DLTPPWNRITMQEGIKQYTGEDFD------AIETLSEARAIADRLNVE----YGEADGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++N FE VE L+QPT V +P+EISPLAK +R TERFE+FI GRE+AN +SE
Sbjct: 360 KIMNLCFEEYVEENLMQPTVVYGHPVEISPLAKQNREKPLTTERFEIFIYGRELANGYSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ R A DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFENQLKE----REAG--------------DDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGIGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|429736166|ref|ZP_19270083.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156072|gb|EKX98713.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 501
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 35/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ R+ G+ P+ ++++ T A L+E Y +LA EE V +AGR++A R
Sbjct: 20 VRREKMDAFRAMGVAPFGHRFEVTDYAADLKERYDYLAEDEEGKE----VRIAGRLMAIR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F TL D +G IQ+Y + + L ++ + +DIGDI+G+ G + +T +GE++V
Sbjct: 76 GHGKASFSTLNDRTGNIQVYFKMDVLGERKYKEEFKRLDIGDIIGIRGVVFKTRRGEITV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV + FRKR KI+ IR+ +
Sbjct: 136 RVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNHEVRETFRKRTKIIQCIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ ++EVETPVL AGGA ARPF+T+HN+L DLYLRIATEL LKR+++GG +++YE+
Sbjct: 196 DERDYLEVETPVLSTLAGGAAARPFITHHNALDIDLYLRIATELSLKRLIVGGLDRVYEM 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ RHNPEFT+IE+Y+A++D++ +M ITE IV A V G I YQG++I
Sbjct: 256 GRIFRNEGMDVRHNPEFTSIEIYQAFADHRDLMAITEGIVRQAAEDVLGTTQITYQGIDI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L R +M++ V+EATG DF ++ ET A E F E +G
Sbjct: 316 DLNN-VRTISMNDAVREATGKDF--------LSCETVEEARAMAREIGVPF--EERHGIG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPTF+ +P EISPLAK + +T+RFE F+ GRE+AN F+E
Sbjct: 365 GILNAAFEEKVEESLMQPTFITGHPTEISPLAKRNADDPRITDRFEFFVYGRELANGFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R EQ+ Q +E+ D V +D DF+TALEYG+
Sbjct: 425 LNDPIDQEQRFMEQLEQ-------------------REAGDAEAHV-MDRDFITALEYGL 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVMLLT+SASIRDV+ FP +K
Sbjct: 465 PPTGGLGIGVDRLVMLLTDSASIRDVLLFPTMK 497
>gi|357636811|ref|ZP_09134686.1| lysine--tRNA ligase [Streptococcus macacae NCTC 11558]
gi|357585265|gb|EHJ52468.1| lysine--tRNA ligase [Streptococcus macacae NCTC 11558]
Length = 496
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/529 (44%), Positives = 340/529 (64%), Gaps = 34/529 (6%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
A+ + +D++ VR ++ + EL G++P+ +++RT ++ QL+E Y + EE +
Sbjct: 2 ANQHTEELNDQQIVRREKMAALAEL---GIDPFGKRFERTATSGQLKEEYADKSK-EELH 57
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
N+ ++AGR++ +R GK+ F L+D G IQ+Y K+ + + + K DIGD L
Sbjct: 58 DINETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFL 116
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E +
Sbjct: 117 GVEGEVMRTDMGELSIKATHMTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLE 176
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F R+KI+SEIR+ ++SLGF+EVETPVL AGGA A+PF T+HN+ D+ LRIATEL
Sbjct: 177 RFVTRSKIISEIRRYLDSLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATEL 236
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+++GG E++YE+GRIFRNEG+ HNPEFT+IE+Y+AY+D++ +M++TE I+ + A
Sbjct: 237 HLKRLIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTENIIQNAA 296
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
AV G I YQG EI + P++R + +L+KE TG++F E TL
Sbjct: 297 KAVKGNGPIKYQGTEIKINEPFKRAHIVDLIKEVTGVNF---------WPEMTLEEAQAL 347
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+ K+ + + SVG+++N FE VE L+QP FV +P+E+SPLAK + T+R
Sbjct: 348 AKEKNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNTDDPRFTDR 407
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI +E NAF+EL DP+DQ R + Q AA E DD +
Sbjct: 408 FELFIMTKEYGNAFTELNDPIDQLERFKAQ---------AAAKEL---------GDDEA- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 449 -TGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|418038547|ref|ZP_12676876.1| Lysine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|354693195|gb|EHE92972.1| Lysine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
Length = 494
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/519 (45%), Positives = 326/519 (62%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+E LR G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMENLREAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG E
Sbjct: 186 IRRYMDGRGYLEVETPVLNNEAGGAAARPFYTHHNSLDIDMALRIATELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR+FRNEG+ HNPEFTT+E YEAY+D++ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI +E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINCKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|358067284|ref|ZP_09153765.1| hypothetical protein HMPREF9333_00646 [Johnsonella ignava ATCC
51276]
gi|356694456|gb|EHI56116.1| hypothetical protein HMPREF9333_00646 [Johnsonella ignava ATCC
51276]
Length = 656
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/531 (45%), Positives = 334/531 (62%), Gaps = 44/531 (8%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY---AYKWDRTHSANQLQEIYRHLANGEE 106
S+ D + R K+ +L+ +G +PY Y + H+A+ + ++
Sbjct: 11 STKENIKEDLNHILQARYDKLSQLKEQGKDPYLITKYTYS-CHTADIVDSYEQY------ 63
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
E+ VSVAGR++++R GK +F + D +G IQ Y ++ + + + + K F DIGD
Sbjct: 64 ---ESKEVSVAGRLMSKRIMGKASFCNILDLTGRIQSYVARDSIGEEAYAEFKKF-DIGD 119
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+G++G++ +T+ GE+S+ + +L+KSL PLP+K+HGLTD D RYRQRYVD+I +V
Sbjct: 120 IVGITGTVFKTKTGEISIHASKAELLSKSLRPLPEKFHGLTDTDTRYRQRYVDLIVNTDV 179
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
+ F KR+KI++EIRK +++ GF+EVETP+L AGGA ARPF ++N+L D+ LRI+
Sbjct: 180 RETFIKRSKIITEIRKFLDTQGFIEVETPILVSNAGGAAARPFEAHYNALNEDVKLRISL 239
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
EL+LKR+++GG EK+YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + H
Sbjct: 240 ELYLKRLIVGGLEKVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYYGMMELTENLFRH 299
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
A+ V TI Y V I L P+ + T+ VK+ TGIDF+E+ D+ A+E
Sbjct: 300 LAIEVCKSTTIPYADVMIDLGSPFEKITLTEAVKKYTGIDFDEVP-DITAARE------- 351
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
L K E + G++LN FE VE L+QPTFV DYPIE+SPL K GL
Sbjct: 352 --LAKKHNIQFEERHTKGDILNLFFEEFVEKNLIQPTFVTDYPIEVSPLTKKKSGSNGLV 409
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
ERFELFI GREMANA+SEL DP+DQR R + + A E +H
Sbjct: 410 ERFELFIYGREMANAYSELNDPIDQRER---------------FAAQEEAFAAGDEEANH 454
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ D+DF+ ALE GMPP G+G GIDRLVMLLTNS SIRDV+ FP +K
Sbjct: 455 T-----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSQSIRDVLLFPTMK 500
>gi|39997369|ref|NP_953320.1| lysyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409912713|ref|YP_006891178.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|39984260|gb|AAR35647.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298506306|gb|ADI85029.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 491
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/515 (45%), Positives = 329/515 (63%), Gaps = 40/515 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND--HVSVAGRVVAR 123
R +KV+ L G+ PY + H++ +E Y G E+D +VAGR++AR
Sbjct: 11 RRRKVDALWEAGINPYPNDFKPLHTSADFREAY-----GTVDTIEDDPRSFTVAGRIIAR 65
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R+FGK AF+ ++D G +Q+Y K+ + + F+ + F DIGDI+GV G+ RT+ GEL+
Sbjct: 66 RSFGKAAFIQIQDRKGRMQVYVRKDTVGDEAFEAFETF-DIGDIVGVGGTPFRTKTGELT 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ +LTKSL PLP+K+HGLTDV+ RYRQRYVD+I PEV +VF KR++IV+ IR+
Sbjct: 125 LNAAFIRLLTKSLQPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFVKRSRIVNLIREF 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ F+EVETP++Q GGA ARPFVT+HN+L L+LRIA EL+LKR+++GGFE+++E
Sbjct: 185 MVRKDFLEVETPMMQPIPGGATARPFVTHHNALDMQLFLRIAPELYLKRLVVGGFERVFE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
I R FRNEG+S RHNPEFT +E Y+AY+ ++ +M+ TEE++ H A V G L YQ +
Sbjct: 245 INRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVAQEVLGTLDFTYQEMP 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGN-DLKVAKETTLRALGDGLENKDKFVIESSPS 422
I +RPW+R + + E ID L + DL A L GL+ + +
Sbjct: 305 ISFQRPWKRLAVVEAILEYGDIDAKSLADRDLAYAYAQRL-----GLD------LPADVG 353
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G L+ E+FE V E KL+QPTF+ YP E+SPL++ + + +RFELFI GREMANAF
Sbjct: 354 YGKLITEIFEEVAETKLIQPTFITAYPTEVSPLSRKSDKDPEIVDRFELFIAGREMANAF 413
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R QV K K D+ Y +D+D++ ALE+
Sbjct: 414 SELNDPVDQKERFLAQV-----------------AAKAKGDDEAHY---MDEDYIRALEF 453
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP +G G+GIDRLVMLLT+S SIRDVI FP L+
Sbjct: 454 GLPPTAGEGIGIDRLVMLLTDSPSIRDVILFPQLR 488
>gi|421452133|ref|ZP_15901494.1| Lysyl-tRNA synthetase [Streptococcus salivarius K12]
gi|400182564|gb|EJO16826.1| Lysyl-tRNA synthetase [Streptococcus salivarius K12]
Length = 511
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/530 (43%), Positives = 340/530 (64%), Gaps = 31/530 (5%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
R + S+ + + +R +K+ L +G++P+ +++RT ++ QL+E Y EE
Sbjct: 13 RTNMSNQHMEELNDQQIVRREKMAALAEQGIDPFGKRFERTATSGQLKEKYAD-KTKEEL 71
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
+ N+ ++AGR++ +R GK+ F ++D G IQ+Y K+ + + ++ K D+GD
Sbjct: 72 HEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDF 130
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
LG+ G + RT+ GELS+ L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E
Sbjct: 131 LGIEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESF 190
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F R+KI+SEIR+ +++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATE
Sbjct: 191 DRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATE 250
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GG E++YEIGRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H
Sbjct: 251 LHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHA 310
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A AV G I+YQG EI + P++R M + +KE TG+DF + D+ + + + A
Sbjct: 311 AKAVKGDGPINYQGTEIKINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA--- 364
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
K+ V + VG+++N FE VE L+QPTFV +P+ +SPLAK + T+
Sbjct: 365 ---EKNVPVEKHYTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTD 421
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFELFI +E NAF+EL DP+DQ +R E Q AA E DD +
Sbjct: 422 RFELFIMTKEYGNAFTELNDPIDQLSRFEAQ---------AAAKEL---------GDDEA 463
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+V ALEYGMPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 --TGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 511
>gi|423070627|ref|ZP_17059403.1| lysyl-tRNA synthetase [Streptococcus intermedius F0413]
gi|355365183|gb|EHG12907.1| lysyl-tRNA synthetase [Streptococcus intermedius F0413]
Length = 495
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/514 (44%), Positives = 330/514 (64%), Gaps = 34/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT + QL+E Y EE + + ++AGR + +R
Sbjct: 15 IRREKMTALAEQGIDPFGKRFERTADSAQLKEKYSD-KTKEELHELAETATIAGRFMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K DIGD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKK-ADIGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R++IVSEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YE+
Sbjct: 193 DNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEM 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE Y+AY+D++ +M++TE I+ A AV ++ YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ R + R+ M +KE TGIDF D+ + + T L + +E +VG
Sbjct: 313 FIGRKFARKHMLEAIKEQTGIDF---WKDMTLEEAT-------ALAKEHHVTVEKHFTVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTF+ +P+E+SPLAK + T+RFELFI GRE ANAF+E
Sbjct: 363 HIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D D+V ALEYG
Sbjct: 423 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDYVEALEYG 461
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL+MLLT+ SIRDV+ FP +K
Sbjct: 462 MPPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495
>gi|336433915|ref|ZP_08613723.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
gi|336015076|gb|EGN44904.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 498
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/521 (44%), Positives = 336/521 (64%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K+ +L++ G +P+ K+D+TH + +++E + LA E VS+
Sbjct: 13 DLNQLRKVRREKLADLQANGKDPFVITKYDQTHHSLEIKENFEELAGKE--------VSI 64
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F ++D G IQ Y ++ + + + + K +D+GD++G++G +
Sbjct: 65 AGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEAYKEFKK-MDVGDVIGITGEVFE 123
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE S+ +S +L+KSL LP+K+HGLT+ D RYRQRYVD+I P+V F R+KI
Sbjct: 124 TKTGEKSIHASSVTLLSKSLQILPEKFHGLTNTDIRYRQRYVDLIMNPDVKQTFINRSKI 183
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++G
Sbjct: 184 LSAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALDEDFKLRISLELYLKRLIVG 243
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 244 GMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTV 303
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I+Y GV++ L +P+ R TM + VK+ G+D+NE+ ET +A E+ +F
Sbjct: 304 IEYNGVQMDLGKPFERITMVDAVKKYAGVDWNEV--------ETLEQARALAKEHHVEF- 354
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++L FE E L+QPTFV+D+PIEISPL K + TERFE F+ G
Sbjct: 355 -EERHKKGDILALFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGW 413
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + Q +E L + DD + T D+DF
Sbjct: 414 EMANAYSELNDPIDQRERFKAQ------------------EELLAQGDDEAN--TTDEDF 453
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+ MLLTNSA+IRDV+ FP +K
Sbjct: 454 LNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFPTMK 494
>gi|419720307|ref|ZP_14247546.1| lysine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383303524|gb|EIC94970.1| lysine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 649
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/529 (44%), Positives = 340/529 (64%), Gaps = 40/529 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESN 108
S+ ++ D + R K+ EL+ G +P+ K+D + +++ + L
Sbjct: 4 SNEPMTSEDLNHILKARRDKLSELQQTGNDPFFITKYDVDKHSTDIKDNFEKL------- 56
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V++AGR++++R GK +F ++D +G IQ Y ++ + D++ K +DIGDI+
Sbjct: 57 -DGKSVNIAGRLMSKRVMGKASFCHVQDLTGKIQAYVARDSVGEDEYKAFKK-LDIGDIV 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV+G++ +T+ GE+S+ V+L+KSL PLP+K+HGLTD D RYRQRYVD+I +V D
Sbjct: 115 GVTGTVFKTQTGEISIHATDVVLLSKSLKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKD 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR++I++EIRK ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL
Sbjct: 175 TFVKRSRIITEIRKFLDGQGFIEVETPMLVSNAGGAAARPFNTHYNALDEDVKLRISLEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + + A
Sbjct: 235 YLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRYLA 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G I Y I L +P+ R TM +K+ +G+DFN++ ETT A
Sbjct: 295 QTVCGSTAIPYAEAMIDLGKPFERITMVEAIKKYSGVDFNKV--------ETTKEAKALA 346
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
E K +F E + G+++N FE VE KL+QPTFV+D+PIE+SPL K ER
Sbjct: 347 KEKKIEF--EERHTRGDIINLFFEEFVEEKLIQPTFVMDHPIEVSPLTKKKPGDPRYVER 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANA+SEL DP+DQR R + Q E AA +++ +H+
Sbjct: 405 FELFIYGREMANAYSELNDPIDQRERFKAQ-----EAAFAAGDDEA----------NHT- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 449 ----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 493
>gi|315613067|ref|ZP_07887978.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
gi|315315177|gb|EFU63218.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
Length = 496
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +K TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKGITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDDRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|317120994|ref|YP_004100997.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
gi|315590974|gb|ADU50270.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
Length = 552
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/521 (45%), Positives = 335/521 (64%), Gaps = 44/521 (8%)
Query: 59 REAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAG 118
+E ++A R K++ R +G++P+ ++D TH A + E + L E V VAG
Sbjct: 71 QEVLKARR-AKLDFWRRRGVDPFGRRYDTTHHARDVVEQFGQL--------EGQVVRVAG 121
Query: 119 RVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTE 178
RV+ R G+ AF L+D SG +QL L D++ + +D GD +G G++ RT
Sbjct: 122 RVMGLRRHGRAAFADLQDVSGRLQLLARVGPLPEDEYRAF-LELDRGDWIGAEGTVIRTR 180
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GE+SV V FV+L KSL PLP+K+HGL DVD RYRQRYVD++ P+V + F+ R+K++
Sbjct: 181 RGEISVEVTGFVLLGKSLYPLPEKWHGLRDVDLRYRQRYVDLVVNPQVLETFKIRSKVIR 240
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
EIR ++ GF EVETPVL GGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG
Sbjct: 241 EIRAFLDRRGFYEVETPVLHLIYGGAAARPFITHHNALDLDLYLRIALELHLKRLIVGGM 300
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YEIGR+FRNEG+STRHNPEFT +E+Y+A+SDY+ MM +TE++V+H A AV+G +
Sbjct: 301 ERVYEIGRVFRNEGISTRHNPEFTMLELYQAFSDYEGMMELTEQLVSHVAQAVHGTPVVR 360
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG EI PWRR + ++E G+ +++ + + RAL +
Sbjct: 361 YQGQEIDFTPPWRRLSFAQALEEMAGVRLDDVLTEDGARRVAQERAL----------ELT 410
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAK--PHRRHAGLTERFELFICGR 476
P+ +L+E+ ++ V+P+LVQPTF+ DYP+ +SPLA+ P R H LT RFE + G
Sbjct: 411 KDPTPAAVLDELVDVYVQPRLVQPTFLYDYPVVLSPLARRIPDRPH--LTYRFEALVAGM 468
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E+ANAFSEL DP DQR R EEQ+ A A ++ + Q +D+D+
Sbjct: 469 EIANAFSELNDPDDQRQRFEEQL------AARARGDEEAHQ--------------MDEDY 508
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE G+P G+G+GIDRLVML+T+S SIRDVI FP+++
Sbjct: 509 IHALEIGLPATGGLGIGIDRLVMLMTDSPSIRDVILFPLMR 549
>gi|227522413|ref|ZP_03952462.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
gi|227090471|gb|EEI25783.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
Length = 501
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/513 (44%), Positives = 326/513 (63%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR +G++P+ +++ RT+ A QL + + + N N V+VAGR++A+R
Sbjct: 13 VRRQKMDELRKEGIDPFGHRFQRTYLATQLHDEFDKTDKDDLMNL-NKKVTVAGRMMAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G IQ+Y K+ + D + K DIGD LG+SG + +T+ GEL+V
Sbjct: 72 GKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKR-SDIGDHLGISGQIIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDK+HGL D +++YRQRY+D+IS + D F KR+ I++ IR +
Sbjct: 131 RAESVTFLSKALRPLPDKWHGLQDKEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S ++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I A V I YQG I
Sbjct: 251 GRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKTVTDDGMITYQGHRI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L++P++R+ M + +KE TGIDF + L ++ E G
Sbjct: 311 DLDKPFKRQHMVDAIKEYTGIDF----------WKPMDDDDAKKLADEHHIHYEPWWKTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE +V+PKL QPTF+ +P+EISPLAK + T+RFE +I E ANAF+E
Sbjct: 361 HIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNAEDPRFTDRFEFYILTNEFANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ E A +D+D++ ALEYGM
Sbjct: 421 LNDPIDQRQRFEAQVKERQEGNDEAEG--------------------IDEDYIEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493
>gi|260588923|ref|ZP_05854836.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
gi|260540702|gb|EEX21271.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
Length = 646
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/517 (45%), Positives = 332/517 (64%), Gaps = 42/517 (8%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K+ EL+ G +P+ K+D TH + ++++ + L E VS+AGR++++
Sbjct: 19 VRREKLTELQENGKDPFQITKYDVTHHSMEVKDAFEEL--------EGKSVSLAGRMMSK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK +F +++D G+IQ Y ++ + D + K +DIGDI+G+ G + +T+ GE+S
Sbjct: 71 RVMGKASFCSIQDVQGSIQSYVARDNIGEDHYKDFKK-MDIGDIVGIKGEVFKTKTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ +L+KSL PLP+K+HGLT+ D RYRQRYVD+I +V D F KR+KI++ IR
Sbjct: 130 IHATEVTLLSKSLKPLPEKFHGLTNTDLRYRQRYVDLIMNADVKDTFIKRSKIIASIRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++GG EK+YE
Sbjct: 190 LNGQGFLEVETPMLVANAGGAAARPFETHFNALDEDFKLRISLELYLKRLIVGGMEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G I Y G+E
Sbjct: 250 IGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTKIVYNGIE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPS 422
+ L +P+ R TM + VK+ G+DFNE+ + LK A+E K+ V E
Sbjct: 310 MDLGKPFERITMVDAVKKYAGVDFNEI-HTLKEAREVA----------KEHHVEYEERHK 358
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++L+ FE E L+QPTFV+D+PIEISPL K + TERFE F+ G EMANA+
Sbjct: 359 KGDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAY 418
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R + Q +E L + D+ + T D+DF+ ALE
Sbjct: 419 SELNDPIDQRERFKAQ------------------EELLAQGDEEAN--TTDEDFMNALEI 458
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
GM P G+G GIDR+VMLLT+SA+IRDV+ FP +K Q
Sbjct: 459 GMAPTGGIGFGIDRMVMLLTDSAAIRDVLLFPTMKSQ 495
>gi|340751753|ref|ZP_08688563.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229420713|gb|EEO35760.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 493
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/523 (46%), Positives = 334/523 (63%), Gaps = 41/523 (7%)
Query: 58 DREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
DR A AL + K+VEEL+ G++P+ ++D+ N + +I H E +
Sbjct: 6 DRIANDALVMEKWKRVEELKEMGIKPFGERFDK---KNMIGDILSHTPEEELT------F 56
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
AGR++A R GK AF+ + D SG IQ+Y ++ L + + +K + +GDI+GV G++
Sbjct: 57 KTAGRIMAYRGKGKTAFVHIEDISGKIQVYLRQDELGEENYALVKK-IGVGDIIGVEGTL 115
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
T GEL++ + +L K++ LP+K+HGLTDV+ RYR+RYVD+I +V D F KR
Sbjct: 116 FLTSTGELTIRASVVTLLCKNIRSLPEKFHGLTDVETRYRKRYVDLIMNKDVRDTFVKRT 175
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI+S IR+ ++ GF+EVETP++ GGA ARPF+T+HN+L DLYLRIA EL+LKR++
Sbjct: 176 KIISAIRRILDGKGFLEVETPLMHPILGGAAARPFITHHNTLDIDLYLRIAPELYLKRLI 235
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
IGG EK+YE+GR FRNEG+STRHNPEFT IEMY+AY+DY MM++ EEI++ A V G
Sbjct: 236 IGGMEKVYELGRNFRNEGMSTRHNPEFTMIEMYQAYADYTDMMDLAEEIISTLAKDVLGT 295
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
TI Y G EI LE ++R M +L+KE TG+DF K+ T +
Sbjct: 296 STITYNGKEIVLEN-FKRIHMVDLIKEVTGVDF--------WNKDITFEEAKALAKEHHV 346
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V E +VG+++N+ FE E +VQPTFV +P+EISPL+K + + T+RFELFI
Sbjct: 347 EVPEHMNTVGHIINQFFEEKCEETIVQPTFVYGHPVEISPLSKRNEEDSRFTDRFELFID 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAFSEL DP DQR R E QV E+ + +D + V +DD
Sbjct: 407 AREYANAFSELQDPADQRGRFEAQV------------------EEAERGNDEATPV-IDD 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DFV ALEYG+PP GMG+GIDRL+MLLTNS SIRDV+ FP +K
Sbjct: 448 DFVEALEYGLPPTGGMGIGIDRLIMLLTNSESIRDVLYFPQMK 490
>gi|163791063|ref|ZP_02185484.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
gi|159873708|gb|EDP67791.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
Length = 499
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 333/516 (64%), Gaps = 34/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ LR + ++P+ +++R+H +N+L E Y EE + + +VAGR++ +R
Sbjct: 17 VRREKLDVLRERNVDPFGGRFERSHLSNELHEAYDKFTK-EEIAEKEETATVAGRIMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + + K D+GD +GV+G++ +T+ GE+++
Sbjct: 76 GKGKVGFAHLQDRKGQIQIYVRKDAVGEEDYATFKS-ADLGDFIGVTGTIMKTDTGEVTI 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+ E+R +
Sbjct: 135 KPTSVTQLSKALRPLPDKYHGLTNVEQRYRQRYLDLISNRESFDRFTKRSQIIREVRNYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++EVETP L AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 195 NEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELYLRIALELHLKRLIVGGMERVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+D++ +M++ E ++ A V G I Y I
Sbjct: 255 GRVFRNEGVDTTHNPEFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGKITYNEQAI 314
Query: 365 CLERPWRRETMHNLVKEATGIDF-NELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
LE PW+R+ M + +KE +G+DF ++ N+ RAL + D V E S
Sbjct: 315 DLESPWKRQHMVDAIKEHSGVDFWQQMTNE-------EARALA---KEHDVPVTEHS-QF 363
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFE FI G E NAFS
Sbjct: 364 GHVVNEFFEKFVEDKLIQPTFIYGHPLEISPLAKKNVEDPRFTDRFEAFIVGHEYGNAFS 423
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q+++ RA E +D+DF+ +LEYG
Sbjct: 424 ELNDPIDQRERFEAQMQE----RALGNDEAH----------------MIDEDFIESLEYG 463
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
MPP G+G+GIDRLVMLLT++ SIRDV+ FP ++ Q
Sbjct: 464 MPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMRNQ 499
>gi|77409348|ref|ZP_00786050.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|421146762|ref|ZP_15606465.1| lysyl-tRNA ligase [Streptococcus agalactiae GB00112]
gi|77172050|gb|EAO75217.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|401686469|gb|EJS82446.1| lysyl-tRNA ligase [Streptococcus agalactiae GB00112]
Length = 496
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 333/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL E Y + E+ + + ++AGR++ +R
Sbjct: 15 VRREKMAALTEQGIDPFGKRFERTATSGQLNEKYADKSK-EDLHDIEETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRKDSVGEENYEIFKK-ADLGDFLGVEGQVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTD++ YR+R++D+IS + D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFM 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DSNGFLEVETPVLHNEAGGASARPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE Y+AY+DYQ +M++TE I+ H V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + VKE T IDF KE TL + K+ + + +VG
Sbjct: 313 KINEPFKRVHMVDAVKEITDIDF---------WKEMTLEEAQALAQEKNVPLEKHFTTVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEDTLIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q +SA+E DD + V D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------------ASAKEL---GDDEATGV--DYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|147669196|ref|YP_001214014.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|289432464|ref|YP_003462337.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
gi|452203421|ref|YP_007483554.1| lysine--tRNA ligase [Dehalococcoides mccartyi DCMB5]
gi|452204857|ref|YP_007484986.1| lysine--tRNA ligase [Dehalococcoides mccartyi BTF08]
gi|189082959|sp|A5FRN5.1|SYK_DEHSB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|146270144|gb|ABQ17136.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|288946184|gb|ADC73881.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
gi|452110480|gb|AGG06212.1| lysine--tRNA ligase [Dehalococcoides mccartyi DCMB5]
gi|452111913|gb|AGG07644.1| lysine--tRNA ligase [Dehalococcoides mccartyi BTF08]
Length = 498
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/518 (43%), Positives = 332/518 (64%), Gaps = 32/518 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E + A +++K+E ++S+G+ PY + +H++ Q + + E N + + +AGR
Sbjct: 4 EYLNAQKMEKLERIKSRGINPYPSTFHPSHTSAQAVALLVEIETQE--NHLKEVLKLAGR 61
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ RR GK++F+ +RD SG +Q++ + L + LK +D+GD +GV GS+ RT
Sbjct: 62 IMTRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKD-LDLGDFIGVEGSLMRTRT 120
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE S+ +L+KSLLPLP+K+HGL DV+KRYRQRY+D+IS + F R++++S
Sbjct: 121 GEPSLAATKVSMLSKSLLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISV 180
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR + + GF+EVETPVLQ AGGA ARPF+T+H +L D Y+RIA ELHLKR+++GGF+
Sbjct: 181 IRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQALNCDFYMRIALELHLKRLIVGGFD 240
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YEIGRIFRNEG+STRHNPEFT +E Y+AY++Y+ +M+ EE+V+ ++G T+ +
Sbjct: 241 RVYEIGRIFRNEGISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPF 300
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
+ + PW R TM + VK+ GIDF + +A E T R K ++
Sbjct: 301 GDITLDFTPPWPRLTMRDAVKQYAGIDFFDFPTKETLAAEMTRR----------KLKVDP 350
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G L++E+ VEP LVQPTF+ D+P+ +SPLAK LTERFE E+A
Sbjct: 351 AKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIA 410
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP++QRAR +EQ+ EKR+ +++S ++D+DF+ A
Sbjct: 411 NAFSELNDPVEQRARFKEQL----EKRSQLRTDESE---------------SVDEDFLAA 451
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
L YGMPP G+G+GIDRLVML TN SIR+VI FP LK
Sbjct: 452 LAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALK 489
>gi|225860691|ref|YP_002742200.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
gi|298229273|ref|ZP_06962954.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254528|ref|ZP_06978114.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502499|ref|YP_003724439.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
gi|387787877|ref|YP_006252945.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ST556]
gi|417312283|ref|ZP_12098998.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
gi|418082590|ref|ZP_12719792.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44288]
gi|418084787|ref|ZP_12721973.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47281]
gi|418093552|ref|ZP_12730682.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA49138]
gi|418100525|ref|ZP_12737613.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 7286-06]
gi|418118649|ref|ZP_12755608.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA18523]
gi|418141313|ref|ZP_12778126.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13455]
gi|418150278|ref|ZP_12787032.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA14798]
gi|418152451|ref|ZP_12789191.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16121]
gi|418157003|ref|ZP_12793720.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16833]
gi|418164051|ref|ZP_12800725.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17371]
gi|418170926|ref|ZP_12807553.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA19451]
gi|418195702|ref|ZP_12832182.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47688]
gi|418198307|ref|ZP_12834767.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47778]
gi|418222983|ref|ZP_12849628.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 5185-06]
gi|418227302|ref|ZP_12853922.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 3063-00]
gi|419424746|ref|ZP_13964946.1| lysine--tRNA ligase [Streptococcus pneumoniae 7533-05]
gi|419426871|ref|ZP_13967054.1| lysine--tRNA ligase [Streptococcus pneumoniae 5652-06]
gi|419428972|ref|ZP_13969141.1| lysine--tRNA ligase [Streptococcus pneumoniae GA11856]
gi|419435587|ref|ZP_13975683.1| lysine--tRNA ligase [Streptococcus pneumoniae 8190-05]
gi|419437667|ref|ZP_13977740.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13499]
gi|419444326|ref|ZP_13984341.1| lysine--tRNA ligase [Streptococcus pneumoniae GA19923]
gi|419446448|ref|ZP_13986453.1| lysine--tRNA ligase [Streptococcus pneumoniae 7879-04]
gi|419449097|ref|ZP_13989094.1| lysine--tRNA ligase [Streptococcus pneumoniae 4075-00]
gi|419450689|ref|ZP_13990676.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP02]
gi|419501454|ref|ZP_14041140.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47628]
gi|419518521|ref|ZP_14058128.1| lysine--tRNA ligase [Streptococcus pneumoniae GA08825]
gi|419527552|ref|ZP_14067096.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17719]
gi|421287202|ref|ZP_15737968.1| lysine--tRNA ligase [Streptococcus pneumoniae GA58771]
gi|225727166|gb|ACO23017.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
gi|298238094|gb|ADI69225.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
gi|327390248|gb|EGE88590.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
gi|353758027|gb|EHD38620.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA44288]
gi|353760022|gb|EHD40604.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47281]
gi|353767117|gb|EHD47656.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA49138]
gi|353773234|gb|EHD53733.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 7286-06]
gi|353791535|gb|EHD71910.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA18523]
gi|353805564|gb|EHD85838.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA13455]
gi|353817188|gb|EHD97395.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA14798]
gi|353819096|gb|EHD99294.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16121]
gi|353824686|gb|EHE04857.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA16833]
gi|353832378|gb|EHE12496.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17371]
gi|353837096|gb|EHE17182.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA19451]
gi|353862229|gb|EHE42162.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47688]
gi|353862945|gb|EHE42875.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47778]
gi|353880255|gb|EHE60071.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 5185-06]
gi|353883675|gb|EHE63481.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 3063-00]
gi|379137619|gb|AFC94410.1| lysyl-tRNA synthetase, class II [Streptococcus pneumoniae ST556]
gi|379540375|gb|EHZ05548.1| lysine--tRNA ligase [Streptococcus pneumoniae GA13499]
gi|379552232|gb|EHZ17322.1| lysine--tRNA ligase [Streptococcus pneumoniae GA11856]
gi|379566497|gb|EHZ31485.1| lysine--tRNA ligase [Streptococcus pneumoniae GA17719]
gi|379572019|gb|EHZ36976.1| lysine--tRNA ligase [Streptococcus pneumoniae GA19923]
gi|379601815|gb|EHZ66587.1| lysine--tRNA ligase [Streptococcus pneumoniae GA47628]
gi|379613988|gb|EHZ78698.1| lysine--tRNA ligase [Streptococcus pneumoniae 7879-04]
gi|379617256|gb|EHZ81949.1| lysine--tRNA ligase [Streptococcus pneumoniae 8190-05]
gi|379618324|gb|EHZ82999.1| lysine--tRNA ligase [Streptococcus pneumoniae 5652-06]
gi|379620401|gb|EHZ85057.1| lysine--tRNA ligase [Streptococcus pneumoniae 7533-05]
gi|379624155|gb|EHZ88788.1| lysine--tRNA ligase [Streptococcus pneumoniae 4075-00]
gi|379624588|gb|EHZ89219.1| lysine--tRNA ligase [Streptococcus pneumoniae EU-NP02]
gi|379641500|gb|EIA06035.1| lysine--tRNA ligase [Streptococcus pneumoniae GA08825]
gi|395889611|gb|EJH00618.1| lysine--tRNA ligase [Streptococcus pneumoniae GA58771]
Length = 496
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 338/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ ++AGR++ +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A +V G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ ++R M + ++E TG+DF + D+ + + + A K V + VG
Sbjct: 313 KINELFKRVHMVDAIREITGVDFWQ---DMTLEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|322372640|ref|ZP_08047176.1| lysine--tRNA ligase [Streptococcus sp. C150]
gi|321277682|gb|EFX54751.1| lysine--tRNA ligase [Streptococcus sp. C150]
Length = 496
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + +D K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYDIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS + D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG++F + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVNFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|358465959|ref|ZP_09175836.1| hypothetical protein HMPREF9093_00297 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069523|gb|EHI79424.1| hypothetical protein HMPREF9093_00297 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 493
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/520 (44%), Positives = 336/520 (64%), Gaps = 38/520 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++ + K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKAFGSKYDK---QIMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+GV G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGVEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV + F KR +I+
Sbjct: 120 HTEELTLRVKSISLLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+RK ++ GF+EVETP++ GGA A+PF+T+HN+L DLYLRIA EL+LK++++GG
Sbjct: 180 KAVRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLYLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++Y++ R FRNEG+STRHNPEFT +E+Y+A++D+ MM++ E I++ VNG I
Sbjct: 240 FERVYDLNRNFRNEGISTRHNPEFTMVELYQAHADFNDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
+Y GV++ L + + R M +++K+ TG+DF KE T + V
Sbjct: 300 EYDGVQLSL-KNFARVHMVDMIKDVTGVDF---------WKEMTFEEAKKIAKEHHVEVA 349
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
E SVG+++NE FE E K++QPTFV +P+EISPLAK + + T+RFELFI RE
Sbjct: 350 EHMNSVGHIINEFFEQKCEEKVIQPTFVYGHPVEISPLAKRNANNPNFTDRFELFINKRE 409
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
ANAF+EL DP DQR R E QV +E L+ +++ + E+ D+ FV
Sbjct: 410 YANAFTELNDPADQRGRFEAQV-----------------EEALRGNEEATPEI--DESFV 450
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 451 EALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|315925854|ref|ZP_07922060.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315620818|gb|EFV00793.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 491
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/530 (46%), Positives = 341/530 (64%), Gaps = 45/530 (8%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEES 107
++++ TSD V +R K+ +L++ G PY +D T +A +L + N E
Sbjct: 2 SNNNQPKTSD---VIQVRWDKLAQLQAAGQNPYEITSYDVTDTAAELTD------NFEAH 52
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
+N VS+AGR++A+R GK+ F L D SG IQL+ +K+ LL D +DQ+K VDIGDI
Sbjct: 53 EGQN--VSLAGRIMAKRGQGKVGFYDLLDSSGRIQLFLKKD-LLPD-YDQIKK-VDIGDI 107
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + +T++G++SV VN+F +L+KSL LP+KYHGL D D RYR+RYVD+I PEV
Sbjct: 108 VGIKGELFKTQRGQISVRVNAFTLLSKSLQVLPEKYHGLKDTDIRYRERYVDLIVNPEVR 167
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
DVF R+KI++EIR+ ++ GF+EVETPVL AGGA ARPFVT+HN+L +YLRIA E
Sbjct: 168 DVFVIRSKIITEIRRFLDGRGFLEVETPVLNNLAGGANARPFVTHHNTLDIPMYLRIALE 227
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L LKR+++GGF+K+YE+ R+FRNEG+ HNPEFT +E YEAY+DY +MN+ E++ H
Sbjct: 228 LPLKRLIVGGFDKVYELSRVFRNEGMDPTHNPEFTELETYEAYADYVDVMNMVEDLYHHL 287
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A + G + Y G I L P+RR M ++VKE TG+DF+ + + + +A +
Sbjct: 288 ADKILGTTDVAYDGQVIHLGEPFRRARMVDIVKEVTGVDFDGMTDPAEA------KAAAE 341
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
GLE + +VG ++ +VF+ E +L+QPTFV +P+E SPLAK T+
Sbjct: 342 GLEVD----VADLDTVGEIMAKVFDETCEDQLIQPTFVTMHPVETSPLAKKDPADPRYTQ 397
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFEL+I G E ANAFSEL DP DQ+AR E Q+ A++ + + H
Sbjct: 398 RFELYIDGAECANAFSELNDPADQKARFEAQM----------------ARKADGDDEAHP 441
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
Y D DF+ ALE G+PP G+G+GIDRLVML T SIRDVI FP +K
Sbjct: 442 Y----DADFIKALEVGLPPTGGLGIGIDRLVMLFTGQRSIRDVILFPTMK 487
>gi|296111614|ref|YP_003621996.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
gi|339491119|ref|YP_004705624.1| lysyl-tRNA synthetase [Leuconostoc sp. C2]
gi|295833146|gb|ADG41027.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
gi|338852791|gb|AEJ31001.1| lysyl-tRNA synthetase [Leuconostoc sp. C2]
Length = 493
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/501 (46%), Positives = 328/501 (65%), Gaps = 35/501 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A +L ++Y + EE V +AGR+VA+R GK+ F RD
Sbjct: 27 LDPFGKRFERTAKAQELHDLYDS-STLEELEKTPHEVIIAGRMVAKRGAGKVIFADFRDV 85
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L ++ + +K D+GD LG+ G M +TE GEL++L LTK+L
Sbjct: 86 SGKIQVYAKRDDL-AENYPIIKR-ADLGDFLGIKGIMMKTEAGELTILATELTHLTKALR 143
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG+ DV+ RYR+RY+D+I+ E F+ R+KI+S IR ++S F+EVETP+L
Sbjct: 144 PMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETPIL 203
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GGFE++YEIGRIFRNEG+ +H
Sbjct: 204 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNEGMDPKH 263
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +MN TE I A V+ L + YQG EI L + R+ M +
Sbjct: 264 NPEFTTMETYAAYMDFTDVMNETEGIFKAAASVVSDDLKVTYQGTEIDLGTKFARKHMVD 323
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV-IESSPSVGNLLNEVFEIVVE 436
L+KE TGIDF + D+ V T + L D DK V E VG+++N FE VE
Sbjct: 324 LIKEQTGIDFWQ---DMTV---ETAQKLAD-----DKHVKYEKYWDVGHIINAFFEEFVE 372
Query: 437 PKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLE 496
L+QPTFV +P+ +SPLAK + T+RFELFI G E NAF+EL DP+DQRAR E
Sbjct: 373 DTLIQPTFVYGHPVSVSPLAKRNADDDRFTDRFELFIMGSEYGNAFTELNDPIDQRARFE 432
Query: 497 EQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDR 556
Q V+E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDR
Sbjct: 433 AQ-----------VAERENGNDEAE---------GIDEDFIEALEYGMPPTGGLGIGIDR 472
Query: 557 LVMLLTNSASIRDVIAFPILK 577
L+MLLT+S +IRDV+ FP ++
Sbjct: 473 LIMLLTDSDTIRDVLLFPTMR 493
>gi|421839595|ref|ZP_16273130.1| lysyl-tRNA ligase, partial [Clostridium botulinum CFSAN001627]
gi|409733938|gb|EKN35804.1| lysyl-tRNA ligase, partial [Clostridium botulinum CFSAN001627]
Length = 491
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/509 (44%), Positives = 331/509 (65%), Gaps = 43/509 (8%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K++EL+S G +P+ YK +RTH++ ++++ Y L E V+VAGR++++R
Sbjct: 22 RFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDL--------EGKTVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGDI+ V+G++ +T+ GE S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTF-DIGDIISVTGTVFKTKTGETSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR I+ +R+ +
Sbjct: 133 HITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETP+L AGGA A+PF+T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE ++ + V G ++Y+G EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PWRR TM + VKE G+DFN + +D++ +AKE +E K +
Sbjct: 313 DFTPPWRRLTMVDAVKEYAGVDFNIIKDDIEARTIAKEKH-------IEFKKEL---KDC 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G++L +FE E KL+QPTF+ DYP+E SPL K R + TERFE F+ GRE+ NA
Sbjct: 363 TKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNA 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL D + Q+ R +Q+++ + DD +Y +DDDF+T+LE
Sbjct: 423 YSELNDSIVQKERFMQQLKER------------------ELGDDEAY--MMDDDFITSLE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDV 570
GMPP G+G+GIDRL+M LT++ SIRDV
Sbjct: 463 VGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491
>gi|297171257|gb|ADI22264.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
bacterium HF0200_36I24]
Length = 514
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/541 (44%), Positives = 336/541 (62%), Gaps = 47/541 (8%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ + D VR R +K+E LR G+EPYAY +DR+H ++ + +
Sbjct: 5 AKTIVNEDLNQVRQHRREKLEALRKMGIEPYAYVYDRSHLTCDAMALFDQNETEGSLDED 64
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
+ +VSVAGR+++ R+ GK AF + D SG IQ+Y +K+ L D F L + +D+GD +GV
Sbjct: 65 SIYVSVAGRLLSYRSHGKSAFGHIEDRSGQIQIYLKKDILGDDNFGVLDL-LDLGDWIGV 123
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLP-------------DKYHGLTDVDKRYRQRY 217
GS+ RT GE+++ V + +L KSL PLP + GLTD + RYRQRY
Sbjct: 124 EGSLFRTRTGEITIQVKEWALLAKSLRPLPLGKTEIDREKGDATTFSGLTDKEARYRQRY 183
Query: 218 VDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLG 277
D+ P V +VFR RAKI++E+R ++ LGF+EVETP LQ GGA ARPFVT HN L
Sbjct: 184 ADLAVNPSVREVFRTRAKIIAELRSFLDELGFLEVETPALQPLYGGAAARPFVTKHNKLD 243
Query: 278 RDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMM 337
RDLYLRIA EL+LKR+++GG EK+YEI + FRNEG+ HNPEFT +E Y+A+ DY+ +M
Sbjct: 244 RDLYLRIADELYLKRLIVGGLEKVYEICKDFRNEGMDRFHNPEFTMLEFYQAFIDYRGLM 303
Query: 338 NITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVA 397
++TE++++ AL G + YQG EI P++R M + + E G+D L
Sbjct: 304 DLTEKMLSQVALVATGSTDVIYQGQEIDFAPPYQRVPMLDKLSEVMGLDVRGL------- 356
Query: 398 KETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAK 457
++ L D E + ++ + G +++++F +V+P LVQPTFV+D+P +ISPLAK
Sbjct: 357 ---SVAELHDHAEKLNIPGLDGA-GWGKVVDKLFSELVQPSLVQPTFVMDHPKDISPLAK 412
Query: 458 PHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQ 517
HR LTERFELFI G E+ NAFSEL DP+DQR R E Q+
Sbjct: 413 SHRDKPDLTERFELFIAGEEICNAFSELNDPIDQRERFENQI------------------ 454
Query: 518 EKLKES-DDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPIL 576
KL+E+ DD ++ LD+D++ ALEYGMPP G+G+GIDRL M+LT+ SIRDVI F IL
Sbjct: 455 -KLREAGDDETH--PLDEDYIRALEYGMPPTGGLGMGIDRLTMILTDQVSIRDVILFLIL 511
Query: 577 K 577
+
Sbjct: 512 R 512
>gi|407717835|ref|YP_006795240.1| lysyl-tRNA ligase [Leuconostoc carnosum JB16]
gi|407241591|gb|AFT81241.1| lysyl-tRNA ligase [Leuconostoc carnosum JB16]
Length = 493
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/500 (46%), Positives = 325/500 (65%), Gaps = 33/500 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A L ++Y + EE S V +AGR+VA+R GK+ F RD
Sbjct: 27 LDPFGKRFERTAKAQDLHDLYDN-NTLEELESAQHEVIIAGRMVAKRGAGKIIFADFRDV 85
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L + + +K D+GD LG+ G + +TE GEL++LV LTK+L
Sbjct: 86 SGKIQVYAKRDDL-GENYPIIKR-ADLGDFLGIQGIVMKTEAGELTILVTKLTHLTKALR 143
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG+ DV+ RYR+RY+D+I+ + F+ R+KI+S IR ++S F+EVETP+L
Sbjct: 144 PMPDKFHGIADVETRYRKRYLDLIANEDSFKKFQLRSKIISAIRAYMDSQDFMEVETPIL 203
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GGFE++YEIGRIFRNEG+ +H
Sbjct: 204 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNEGMDPKH 263
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +MN TE I A V+ L I YQG EI L + R+ + +
Sbjct: 264 NPEFTTMESYAAYMDFTDVMNETEGIFKAAAAVVSDDLKITYQGTEIDLGVKFARKHLVD 323
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEP 437
L+KE TG+DF KE T+ A L + E VG+++N FE VE
Sbjct: 324 LIKEQTGVDF---------WKEMTV-AEAQKLADDKHVKYEKYWGVGHIINAFFEEFVED 373
Query: 438 KLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEE 497
L+QPTFV +P+E+SPLAK + T+RFELFI G E NAF+EL DP+DQRAR E
Sbjct: 374 TLIQPTFVYGHPVEVSPLAKKNADDPRFTDRFELFILGAEYGNAFTELNDPIDQRARFEA 433
Query: 498 QVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRL 557
Q V+E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDRL
Sbjct: 434 Q-----------VAERENGNDEAE---------NIDEDFIEALEYGMPPTGGLGIGIDRL 473
Query: 558 VMLLTNSASIRDVIAFPILK 577
+MLLT+S +IRDV+ FP ++
Sbjct: 474 IMLLTDSDTIRDVLLFPTMR 493
>gi|319789983|ref|YP_004151616.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114485|gb|ADU96975.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 517
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/520 (46%), Positives = 341/520 (65%), Gaps = 41/520 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE---NDHVSVAGRVVA 122
R +KVE+L+ G EPYAYK+D A +L + + + EE E + S+AGR+V+
Sbjct: 15 RKEKVEKLKELGYEPYAYKFDVNAKAGELIARFGRVKSQEEREGEELPSQEFSLAGRIVS 74
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ-LKVFVDIGDILGVSGSMKRTEKGE 181
R GK AF ++D+SG +Q Y ++ + + +++ K +DIGDI+GV G++ RT GE
Sbjct: 75 MRVMGKAAFFHIQDESGRLQCYIRRDTVGEEFYNKVFKRLIDIGDIVGVKGTLFRTRTGE 134
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
L++ V LTKSL PLP+K+HGL D +KRYRQRY+D+I PEV +VFR R +++ IR
Sbjct: 135 LTLEVKELTPLTKSLRPLPEKWHGLKDTEKRYRQRYLDLIVNPEVREVFRTRTEVIKAIR 194
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++S GF+EVETP+LQ A GA A+PF+T++N+L D+YLRIA EL+LKR+L+GGFE++
Sbjct: 195 EFLDSRGFLEVETPILQPIASGAAAKPFITHYNALDIDVYLRIAPELYLKRLLVGGFERV 254
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA--LAVNGKLTIDY 359
YE+G+ FRNEG+STRHNPEFT +E Y AY+DY +M +TEE+ L G I+Y
Sbjct: 255 YELGKNFRNEGISTRHNPEFTMVEWYMAYADYYDLMEMTEELFEFLLDRLYGPGVREIEY 314
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNE-LGNDLKVAKETTLRALGDGLENKDKFVIE 418
QG +I +RP+RR + + + TG+ +E L N+ KV L+ + IE
Sbjct: 315 QGTKISFKRPFRRISYLEELSKKTGLTPDELLHNEEKV------------LQKAKELEIE 362
Query: 419 SSPSVGNL--LNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
++ + + + E+FE +VEP+L+QPTFV+D+P ISPLAK R + L ERFELFI GR
Sbjct: 363 NAEKLSHFKRVQELFEKLVEPELIQPTFVVDFPKAISPLAKEKRGNPELVERFELFIYGR 422
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
E+ANA+SEL +P +Q R ++Q+ QEK + D+ + E D DF
Sbjct: 423 EVANAYSELNNPEEQARRFKQQL-----------------QEKAR-GDEEAMEY--DADF 462
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPIL 576
VTALEYGMPP +G G+GIDRLVML T+ SIR+V+ FP L
Sbjct: 463 VTALEYGMPPTAGEGIGIDRLVMLFTDKDSIREVLLFPQL 502
>gi|328954383|ref|YP_004371717.1| lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328454707|gb|AEB10536.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 493
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/517 (45%), Positives = 331/517 (64%), Gaps = 42/517 (8%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R KKV+E R GLEP+A + H ++L Y L G E + S+AGR+V R
Sbjct: 11 RRKKVQEWRDAGLEPFANTFHPEHRISELMAAYGGL-TGAELDGLGQIFSLAGRLVLMRQ 69
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK +F +DD G +Q Y +++ + + + K +D+GDI+G GS+ RT+ EL++
Sbjct: 70 FGKASFFHFQDDGGRLQGYIQRQEVGPEAYTFFKR-LDLGDIVGFRGSLFRTKTNELTLQ 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V F++LTK+L PLP+KYHGL+DV++RYRQRY+D+ PEV VFR R++I+ +R +E
Sbjct: 129 VKDFILLTKALRPLPEKYHGLSDVERRYRQRYLDLFVNPEVKGVFRARSRIIRLVRDFME 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
F+EVETP++Q GGA ARPF TYHN L LYLRIA EL+LKR+L+GGFE+++EI
Sbjct: 189 QREFLEVETPMMQPIPGGATARPFQTYHNVLAMPLYLRIAPELYLKRLLVGGFERVFEIN 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT +E Y+AY+ Y+ +M +TEE+ A + G IDYQG +I
Sbjct: 249 RSFRNEGVSTQHNPEFTMMEFYQAYATYEDLMMLTEEMFGQIATQITGGRQIDYQGHKID 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGN-----DLKVAKETTLRALGDGLENKDKFVIESS 420
L PW+R M + GI + + L + + TLR G+G
Sbjct: 309 LTPPWQRLEMQESLTRVGGIPAALVQDRQALVQLALEQGVTLRP-GEG------------ 355
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G + ++F++ VEPKL+QPTF+ +P+EISPL++ ++ + L +RFELFI G+E+AN
Sbjct: 356 --YGRAMAKLFDLHVEPKLIQPTFITGFPVEISPLSRRNQVNPELADRFELFIAGKEIAN 413
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
FSEL DP DQR R +QV +A+E +D ++ +D+DFV AL
Sbjct: 414 GFSELNDPDDQRQRFLKQV---------------AAREA---GNDEAH--FMDEDFVRAL 453
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPPA+G G+GIDRLVMLLT+SASIRDVI FP L+
Sbjct: 454 EYGMPPAAGEGIGIDRLVMLLTDSASIRDVILFPQLR 490
>gi|238926930|ref|ZP_04658690.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
gi|238885164|gb|EEQ48802.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
Length = 501
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/527 (45%), Positives = 335/527 (63%), Gaps = 35/527 (6%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+S D + +R +K++ RS G+ P+ ++++ T A L++ Y HLA EE
Sbjct: 6 ASVAQEQDLNEMMRVRREKMDAFRSMGIAPFGHRYEVTDYAENLKKEYVHLAEDEEGKE- 64
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
V +AGR++A R GK +F TL D +G IQ+Y + + L ++ + +DIGDI+G+
Sbjct: 65 ---VHIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDIGDIIGI 121
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G + +T +GE++V V F +L K+L PLP+K+HGL DVD RYRQRY+D++ EV + F
Sbjct: 122 RGVVFKTRRGEVTVRVEDFDLLAKALRPLPEKFHGLKDVDTRYRQRYLDLMVNQEVRETF 181
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
RKR I+ IR+ +++ F+EVETPVL AGGA ARPFVT+HN+L DLYLRIATEL L
Sbjct: 182 RKRTAILQSIRRYLDARDFLEVETPVLSTLAGGAAARPFVTHHNALDIDLYLRIATELSL 241
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG +++YE+GR+FRNEG+ RHNPEFT+IE+Y+A++D+ +M ITE IV A
Sbjct: 242 KRLIVGGLDRVYEMGRVFRNEGMDVRHNPEFTSIEIYQAFADHYDLMAITEGIVRQAAED 301
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G I YQGVEI L + R +M++ V+EATG DF L RA+ +
Sbjct: 302 VLGTTKITYQGVEIDLGQ-VRTISMNDAVREATGKDF------LSCRTVDEARAMAREIH 354
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
E +G +LN FE VE L+QPTF+ +P EISPLAK + +T+RFE
Sbjct: 355 ----VPFEERHGIGGILNAAFEEKVEESLMQPTFITGHPTEISPLAKRNADDPRITDRFE 410
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
FI GRE+AN F+EL DP+DQ R +Q+ AQ + +++ H
Sbjct: 411 FFIYGRELANGFTELNDPIDQEQRFLDQL----------------AQREAGDAEAH---- 450
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+VTALEYG+PP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 451 VMDHDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 497
>gi|116511230|ref|YP_808446.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
gi|122940346|sp|Q031U8.1|SYK_LACLS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|116106884|gb|ABJ72024.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
cremoris SK11]
Length = 494
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/519 (45%), Positives = 325/519 (62%), Gaps = 43/519 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-----SVAGR 119
+R +K+ L G++P+ +K+ RTH++ +L E Y +E E H VAGR
Sbjct: 13 VRREKMGNLHDAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGR 66
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ +R GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+
Sbjct: 67 LMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDM 125
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D+IS E + F R+KI+SE
Sbjct: 126 GELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISE 185
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ ++ G++EVETPVL AGGA ARPF T+HNSL D+ LRIATELHLKR+++GG E
Sbjct: 186 IRRYMDGRGYLEVETPVLNNEAGGASARPFYTHHNSLDIDMALRIATELHLKRLIVGGME 245
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K+YE+GR+FRNEG+ HNPEFTT+E YEAY+D++ +M++TE I H A V G+ ++Y
Sbjct: 246 KVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEY 305
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
G EI + ++R M + +KE G+DF E T + D V +
Sbjct: 306 DGKEINVGGKFKRVHMVDAIKEVAGVDF---------WPEMTFEEATALAKEHDIHVEKH 356
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
SVG+++NE FE VE L+QPTFV +P EISPLAK + + T+RFELFI G+E A
Sbjct: 357 FTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYA 416
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVT 538
NAFSEL DP+DQ R E AQ K KE DD + +D D+V
Sbjct: 417 NAFSELNDPIDQLERFE-------------------AQAKAKELGDDEA--TGVDYDYVE 455
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE+GMPP G+G+GIDRLVML T + SIRDV+ FP +K
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK 494
>gi|410697131|gb|AFV76199.1| lysyl-tRNA synthetase (class II) [Thermus oshimai JL-2]
Length = 491
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/512 (46%), Positives = 332/512 (64%), Gaps = 38/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ +E L G EPY Y++ +TH+A ++ E + G E E V++AGR++A R
Sbjct: 8 RLLNLEALVEAGFEPYPYRFPKTHAALEILEDKKGAPPGTEWPEE---VALAGRILALRR 64
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L+D+SG IQLY K+ + Q++ LK +D+GD+LGV G++ T+ GE++V
Sbjct: 65 MGKVTFAHLQDESGRIQLYFAKDT--TPQYELLKK-LDVGDLLGVKGTVFTTKTGEVTVK 121
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V S+ L KSL PLPDK+HGL D + RYR+RY+D+I PEV +VFRKR+++V IR+ E
Sbjct: 122 VLSWTPLVKSLHPLPDKWHGLKDKEARYRRRYLDLIMNPEVKEVFRKRSEMVRYIRRFFE 181
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP+LQ GGAEARPF TYHN+L + +LRI+ EL+LKR+L+GGFEK++EIG
Sbjct: 182 EKGFLEVETPILQPTTGGAEARPFKTYHNALDHEFFLRISLELYLKRLLVGGFEKVFEIG 241
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ HNPEFT +E Y AY+DY M+ + EE+++ ALA+ G + Y G +
Sbjct: 242 RNFRNEGIDHNHNPEFTMLEAYWAYADYLDMLALVEELLSGLALALMGSHQVPYGGRTLN 301
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+ P+RR + +KEA G+ F+ L D LR D + + P+
Sbjct: 302 FQPPFRRISFVESLKEAAGLPFDPLDLD-------RLRLWADAHHPE----LAQVPAY-K 349
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LL+++F I VEP L PTFV+D+P+ +SPLAK HR GLTER++L+I G E+A +SEL
Sbjct: 350 LLDKLFGIYVEPSLQDPTFVMDFPLVLSPLAKRHREKPGLTERWDLYIGGMEIAPCYSEL 409
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
D LDQR R EQ R+ KE D+ + E D+DF+ ALEYGMP
Sbjct: 410 NDALDQRERFLEQARRR------------------KEGDEEAPEP--DEDFLLALEYGMP 449
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA+G+GLGIDRL M+ T+ S+RDV+ FP++K
Sbjct: 450 PAAGLGLGIDRLAMIFTDQPSLRDVLLFPLMK 481
>gi|395208810|ref|ZP_10397975.1| lysine--tRNA ligase [Oribacterium sp. ACB8]
gi|394705411|gb|EJF12937.1| lysine--tRNA ligase [Oribacterium sp. ACB8]
Length = 661
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/527 (45%), Positives = 331/527 (62%), Gaps = 40/527 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSE 110
++ + D + R K++EL+ +P+ K ++TH + +++E + L E
Sbjct: 18 NNANQQDMNHILKARYDKLKELQDAQADPFLITKAEQTHHSTEIKENFFAL--------E 69
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
N V +AGRV+A+R GK FL ++D G IQ+Y +E L +++ K +DIGDI+ V
Sbjct: 70 NQQVVIAGRVMAKRVMGKAGFLHVQDRDGKIQVYVSRESLGEEEYKAYKR-LDIGDIVEV 128
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG + +T+ GE+S+ ++L+KSL PLP+K+HGL D D RYRQRYVD+I + DVF
Sbjct: 129 SGFVFKTQTGEISIHGEKILLLSKSLYPLPEKFHGLQDTDTRYRQRYVDLIMNEDSRDVF 188
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR++I+ EIR + F+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+L
Sbjct: 189 MKRSQILREIRNFLAGRDFLEVETPMLVENAGGAAARPFETHYNALNEDVKLRISLELYL 248
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR++IGG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A
Sbjct: 249 KRLIIGGMERVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYDGMMELTESMFRYLAEK 308
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G L I YQG I LE P+RR TM + +KE GIDF+ K+ RAL
Sbjct: 309 VCGTLHISYQGTPIDLESPFRRLTMTDAIKEYAGIDFD------KIQTLEEARALA---- 358
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ + E +G++ N FE E KL+QPTF++D+P+ ISPL K ERFE
Sbjct: 359 KEKEIAYEEHHGIGDIENLFFEEYCEEKLIQPTFIMDHPLSISPLTKKKPSDPTKVERFE 418
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GREMANA+SEL DP+DQR R + AQ+ L ++ D
Sbjct: 419 LFIYGREMANAYSELNDPIDQRERFK-------------------AQDALADAGDEEANH 459
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
T D+DF+ A+E GMPP G+G GIDRLVMLLT+SASIRDV+ FP +K
Sbjct: 460 T-DEDFLHAMEIGMPPTGGIGYGIDRLVMLLTDSASIRDVLLFPTMK 505
>gi|242279993|ref|YP_002992122.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|242122887|gb|ACS80583.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 508
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/515 (45%), Positives = 336/515 (65%), Gaps = 33/515 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R++K L +G+ Y + + + + Y +L GEE + +AGRV+ R+
Sbjct: 18 RVEKACGLLDEGVPLYPNDFSKDTEVSDIWGNYDNLG-GEELEALGKKFKLAGRVITHRS 76
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+AF L+D +G IQ+Y ++ L +D + K F DIGDI+GV G++ RT+ EL+V
Sbjct: 77 FGKVAFFHLQDPTGRIQVYAARDDLGADLYKIFKKF-DIGDIVGVEGTLFRTKTDELTVK 135
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+ ++TKS+ PLP+KYHGL DV+ RYRQRYVD+I P ++F+KR IV IR ++
Sbjct: 136 ADKVDLITKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPRAREIFQKRTLIVRAIRNYLD 195
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GF+EVETP++ AGGA ARPF T+HN+L LY+RIA EL+LKR+L+GGFEK+YEI
Sbjct: 196 SKGFMEVETPMMHPIAGGAAARPFTTHHNALDMQLYMRIAPELYLKRLLVGGFEKVYEIN 255
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y AY++++++M++TEE+++ VNG IDYQ I
Sbjct: 256 RNFRNEGISVRHNPEFTMLEFYWAYANFENLMDLTEEMISSVCKEVNGDTVIDYQDERID 315
Query: 366 L-ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R H +++ G+ E+ ND KE ++ LG+ +K +G
Sbjct: 316 LTPGAWHRMAFHESLEKVGGVS-PEVYNDYDKCKE-LVKKLGEKAVEGEK--------LG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F+ +VEPKL+QP F+ YP +ISPL++ + + +T+RFELFI GRE+ANAFSE
Sbjct: 366 KLQAKLFDALVEPKLIQPHFIYHYPTDISPLSRRNEENPDITDRFELFIYGRELANAFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EQ V+EK + DD ++ +D+D+V ALEYGM
Sbjct: 426 LNDPVDQRCRFMEQ-----------VAEKDAG-------DDEAH--NMDEDYVRALEYGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
PPA+G G+GIDRLVMLLT+SASIR+VI FP+L+ +
Sbjct: 466 PPAAGQGIGIDRLVMLLTDSASIREVILFPLLRTE 500
>gi|73748416|ref|YP_307655.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
gi|123759759|sp|Q3ZWX9.1|SYK_DEHSC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|73660132|emb|CAI82739.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
Length = 498
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/518 (43%), Positives = 332/518 (64%), Gaps = 32/518 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E + A +++K+E ++S+G+ PY + +H++ Q + + E N + + +AGR
Sbjct: 4 EYLNAQKMEKLERIKSRGINPYPSTFHPSHTSAQAVALLVEIETQE--NHLKEVLKLAGR 61
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
++ RR GK++F+ +RD SG +Q++ + L + LK +D+GD +GV GS+ RT
Sbjct: 62 IMNRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKD-LDLGDFIGVEGSLMRTRT 120
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
GE S+ +L+KSLLPLP+K+HGL DV+KRYRQRY+D+IS + F R++++S
Sbjct: 121 GEPSLAATKVSMLSKSLLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISV 180
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR + + GF+EVETPVLQ AGGA ARPF+T+H +L D Y+RIA ELHLKR+++GGF+
Sbjct: 181 IRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQALNCDFYMRIALELHLKRLIVGGFD 240
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
++YEIGRIFRNEG+STRHNPEFT +E Y+AY++Y+ +M+ EE+V+ ++G T+ +
Sbjct: 241 RVYEIGRIFRNEGISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPF 300
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
+ + PW R TM + VK+ GIDF + +A E T R K ++
Sbjct: 301 GDITLDFTPPWPRLTMRDAVKQYAGIDFFDFPTKETLAAEMTRR----------KLKVDP 350
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G L++E+ VEP LVQPTF+ D+P+ +SPLAK LTERFE E+A
Sbjct: 351 AKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIA 410
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP++QRAR +EQ+ EKR+ +++S ++D+DF+ A
Sbjct: 411 NAFSELNDPVEQRARFKEQL----EKRSQLRTDESE---------------SVDEDFLAA 451
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
L YGMPP G+G+GIDRLVML TN SIR+VI FP LK
Sbjct: 452 LAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALK 489
>gi|445389372|ref|ZP_21428157.1| lysyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444750403|gb|ELW75220.1| lysyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
Length = 496
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/513 (44%), Positives = 333/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+D++ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFTTIE+Y+AY+D+ +MN+TE I+ H A V G I+YQG EI
Sbjct: 253 GRVFRNEGMDATHNPEFTTIEVYQAYADFHDIMNLTEGIIQHAAKTVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|295099925|emb|CBK89014.1| Lysyl-tRNA synthetase (class II) [Eubacterium cylindroides T2-87]
Length = 649
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/515 (45%), Positives = 328/515 (63%), Gaps = 33/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+++L+ G++P+ ++DRT ++ ++ E Y + EE + HV VAGR++ +R
Sbjct: 10 VRRQKMQDLQDMGIDPFGKRYDRTTTSGKIVEAYENCTK-EELQEKEVHVKVAGRIMTKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F+ ++D G IQ+Y K+ + DQ++ K DIGDI+G+ G++ +T+ G+LSV
Sbjct: 69 RQGKAGFMHIQDVDGQIQIYVRKDVIGDDQYEIFKK-NDIGDIVGIEGTVMKTDHGQLSV 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ L+KSL PLP+K+HGLTDV++RYR+RYVD+I PE + R KI+ I+ +
Sbjct: 128 RAQVYTHLSKSLRPLPEKFHGLTDVEERYRRRYVDLIMNPEAKHIALTRPKIIRAIQHYL 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G VEVETPVLQ GGA ARPFVT+HN+L D Y+RIATEL LKR+++GG E +YEI
Sbjct: 188 DGQGLVEVETPVLQPILGGASARPFVTHHNTLDMDFYMRIATELPLKRLIVGGLEGVYEI 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPEFTT+E Y AYSD MM++ E + A V G I YQG ++
Sbjct: 248 GRLFRNEGMDAMHNPEFTTVEAYVAYSDLYGMMDLIEGLFDSVANEVLGTTEITYQGQQL 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ P++R M + +KEA G+DF KE TL + D V + SVG
Sbjct: 308 SLKAPFKRIHMVDAIKEACGVDF---------WKEMTLDEAKALAKEHDIEVEKIHNSVG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE +VQPTFV +P ISPLAK + +R+ELFICG E ANAFSE
Sbjct: 359 HIINLFFEKYVEETIVQPTFVYGHPTSISPLAKKNAEDPRFADRYELFICGHEYANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQR R E+Q+ +L+E DD + EV D D+V ALEYG
Sbjct: 419 LNDPIDQRQRFEKQL-------------------ELRELGDDEANEV--DTDYVEALEYG 457
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKI 578
MPP G+GLGIDR VMLLT+ +IR+V+ FP +K+
Sbjct: 458 MPPTGGVGLGIDRFVMLLTDQRTIREVLLFPHMKL 492
>gi|357638171|ref|ZP_09136044.1| lysine--tRNA ligase [Streptococcus urinalis 2285-97]
gi|418416796|ref|ZP_12989995.1| lysyl-tRNA synthetase [Streptococcus urinalis FB127-CNA-2]
gi|357586625|gb|EHJ56033.1| lysine--tRNA ligase [Streptococcus urinalis 2285-97]
gi|410874614|gb|EKS22545.1| lysyl-tRNA synthetase [Streptococcus urinalis FB127-CNA-2]
Length = 496
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 333/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++R+ ++ QL+E Y + E+ + N+ +AGR++ +R
Sbjct: 15 VRREKMTALAEQGIDPFGKRFERSANSAQLKEQYADKSK-EDLHDLNETAIIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y ++ + + + K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDREGQIQIYVRQDTVGEENYGIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL D++ YR+R++D+I+ E D F R+KI+SEIR+ +
Sbjct: 133 KATKITHLSKALRPLPEKFHGLNDIETIYRKRHLDLIANRESFDRFVMRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ LGF+EVETPVL AGGA ARPFVT+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLGFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+DYQ +MN+TE I+ H A AV G ++ YQ EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMNLTEGIIQHAAKAVKGDDSVLYQDTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ +P++R + + +KE TG+DF E T E+K + + SVG
Sbjct: 313 KINQPFKRVHIVDAIKEVTGVDF---------WPEMTFEEAVQLAEDKKVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE LVQPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLVQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D+V ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT+S +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDSTTIRDVLLFPTMK 496
>gi|255281438|ref|ZP_05345993.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
gi|255267926|gb|EET61131.1| putative lysine--tRNA ligase [Marvinbryantia formatexigens DSM
14469]
Length = 649
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/523 (44%), Positives = 333/523 (63%), Gaps = 40/523 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K+EEL G P+ K+ RTH + ++E + L E V++
Sbjct: 15 DENQLRKVRREKLEELVESGRNPFEITKYSRTHHSQDIREHFEEL--------EGKTVTL 66
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F ++D G IQ Y ++ + +++ K +DIGDI+G+ G + +
Sbjct: 67 AGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEEEYKAFKK-MDIGDIVGIKGEVFK 125
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ + +L+KSL LP+K+HGLT+ D RYRQRYVD+I PEV D F KR++I
Sbjct: 126 TKTGEISIHASEVTLLSKSLQILPEKFHGLTNTDLRYRQRYVDLIMNPEVKDTFVKRSRI 185
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+S IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L DL LRI+ EL+LKR+++G
Sbjct: 186 ISAIRRYLDGQGFMEVETPMLVQNAGGAAARPFETHFNALNEDLKLRISLELYLKRLIVG 245
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G EK+YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + + A V G
Sbjct: 246 GLEKVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRYVAQEVLGTTK 305
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I Y GVE+ L +P+ R TM + VK+ G+DFNE+ T A E+ ++
Sbjct: 306 IVYNGVEMDLGKPFERITMVDAVKKYAGVDFNEI--------HTLEEARAAAKEHHVEY- 356
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++LN FE E ++QPTFV+D+PIEISPL K + ERFE F+ G
Sbjct: 357 -EERHKKGDILNLFFEEFAEEHMIQPTFVMDHPIEISPLTKKKPENPEYVERFEFFMNGW 415
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R +EQ E + A +E+++ T D+DF
Sbjct: 416 EMANAYSELNDPIDQRERFKEQ-----EAQLAQGNEEAN---------------TTDEDF 455
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+ ALE GMPP G+G GIDR+ MLLT+S +IRDV+ FP +K Q
Sbjct: 456 LNALEIGMPPTGGIGFGIDRMCMLLTDSQAIRDVLLFPTMKSQ 498
>gi|363900433|ref|ZP_09326938.1| hypothetical protein HMPREF9625_01598 [Oribacterium sp. ACB1]
gi|361956307|gb|EHL09625.1| hypothetical protein HMPREF9625_01598 [Oribacterium sp. ACB1]
Length = 650
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/527 (45%), Positives = 331/527 (62%), Gaps = 40/527 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSE 110
++ + D + R K++EL+ +P+ K ++TH + +++E + L E
Sbjct: 7 NNANQQDMNHILKARYDKLKELQDAQADPFLITKAEQTHHSTEIKENFFAL--------E 58
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
N V +AGRV+A+R GK FL ++D G IQ+Y +E L +++ K +DIGDI+ V
Sbjct: 59 NQQVVIAGRVMAKRVMGKAGFLHVQDRDGKIQVYVSRESLGEEEYKAYKR-LDIGDIVEV 117
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
SG + +T+ GE+S+ ++L+KSL PLP+K+HGL D D RYRQRYVD+I + DVF
Sbjct: 118 SGFVFKTQTGEISIHGEKILLLSKSLYPLPEKFHGLQDTDTRYRQRYVDLIMNEDSRDVF 177
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
KR++I+ EIR + F+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+L
Sbjct: 178 MKRSQILREIRNFLAGRDFLEVETPMLVENAGGAAARPFETHYNALNEDVKLRISLELYL 237
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR++IGG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A
Sbjct: 238 KRLIIGGMERVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYDGMMELTESMFRYLAEK 297
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G L I YQG I LE P+RR TM + +KE GIDF+ K+ RAL
Sbjct: 298 VCGTLHISYQGTPIDLESPFRRLTMTDAIKEYAGIDFD------KIQTLEEARALA---- 347
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ + E +G++ N FE E KL+QPTF++D+P+ ISPL K ERFE
Sbjct: 348 KEKEIAYEEHHGIGDIENLFFEEYCEEKLIQPTFIMDHPLSISPLTKKKPSDPTKVERFE 407
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GREMANA+SEL DP+DQR R + AQ+ L ++ D
Sbjct: 408 LFIYGREMANAYSELNDPIDQRERFK-------------------AQDALADAGDEEANH 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
T D+DF+ A+E GMPP G+G GIDRLVMLLT+SASIRDV+ FP +K
Sbjct: 449 T-DEDFLHAMEIGMPPTGGIGYGIDRLVMLLTDSASIRDVLLFPTMK 494
>gi|156740037|ref|YP_001430166.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|189082965|sp|A7NFC6.1|SYK_ROSCS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|156231365|gb|ABU56148.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 489
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 326/513 (63%), Gaps = 37/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV-ARR 124
R+ K+E LR+ G++PY + RTH+ ++ LA ++ + V+VAGR+V ARR
Sbjct: 10 RLAKLERLRAAGIDPYPPRAQRTHTIGEV------LAGFDQLMDRGEQVTVAGRIVGARR 63
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GKLAF + D+SG IQL+ + L + FD+ + +D DI+ SG+++RT++GE SV
Sbjct: 64 VLGKLAFAHIEDESGRIQLWLSRGDLGDEWFDRFRDDLDTFDIVEASGTLRRTQRGEPSV 123
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V +L KSL P P+K+HGL+D+++R+RQRY+D+I PEV DVFR RA IV +R+ +
Sbjct: 124 FVTRMGVLAKSLNPPPEKWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRATIVRTMRRFL 183
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP LQ GGA ARPF+T+HN L +DLYLRIA EL+LKR+++GGFE++YEI
Sbjct: 184 DERGFLEVETPTLQPIYGGASARPFITHHNQLKQDLYLRIAVELYLKRLIVGGFERVYEI 243
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
++FRNEG+ HNPEFT +E Y+AY+DY MM + E++ AL V G TI +QG I
Sbjct: 244 SKVFRNEGVDRTHNPEFTMMECYQAYADYHDMMRLVEDLYRALALEVTGSTTIVFQGQTI 303
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
WRR ++ + E TGID EL +L+ +E +RA G ++ P G
Sbjct: 304 DFGPAWRRVSIPAAIAERTGIDILEL-TELEPLQE-AIRAAG--------LKVDLKPGWG 353
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++E+F + V+P L+QPTFVLD+P+ +SPLAK L ERFE + G E+ NAF+E
Sbjct: 354 RQVDELFSVYVQPALIQPTFVLDHPVALSPLAKRRPDQPLLVERFEPVVAGMEIGNAFTE 413
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQ R EQ R ++ DD + + +D DF+ AL YGM
Sbjct: 414 LNDPLDQEQRFLEQGRAYD------------------AGDDEAQQ--MDVDFLNALMYGM 453
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDR VML T+ SIR+VI FP L+
Sbjct: 454 PPTGGLGIGIDRTVMLFTDQPSIREVILFPHLR 486
>gi|389577086|ref|ZP_10167114.1| lysyl-tRNA synthetase (class II) [Eubacterium cellulosolvens 6]
gi|389312571|gb|EIM57504.1| lysyl-tRNA synthetase (class II) [Eubacterium cellulosolvens 6]
Length = 647
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/530 (44%), Positives = 333/530 (62%), Gaps = 40/530 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEES 107
A + D V +R +K+ EL++ G +P+ K+++TH + QEI + A+ EE
Sbjct: 2 AEQNKKPEQDLNQVLKVRREKLAELQAAGNDPFVITKYNQTHHS---QEIKDNFADLEEK 58
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
+ VS+AGR++++R GK +F ++D G IQ Y ++ L D++ K +DIGDI
Sbjct: 59 D-----VSIAGRIMSKRVMGKASFCHIQDKQGMIQCYVARDALGEDEYKAFKK-MDIGDI 112
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + T+ GE SV +L+KSL PLP+K+HGL D D RYRQRYVD+I EV
Sbjct: 113 VGIEGFVFATKTGETSVHAKKITLLSKSLQPLPEKFHGLVDTDIRYRQRYVDLIMNQEVK 172
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
F KR++I+ EIR + F+EVETP+L AGGA ARPF+T++N+LG D LRI+ E
Sbjct: 173 TTFIKRSEIIREIRNFLAGRDFMEVETPMLVDNAGGAAARPFITHYNALGEDKKLRISLE 232
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L+LKR+++GG E+++EIGR+FRNEGL RHNPEFT +E+Y+AY+DY MM +TE + +
Sbjct: 233 LYLKRLIVGGLERVFEIGRVFRNEGLDQRHNPEFTLMELYQAYTDYNGMMELTESMFRYL 292
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G TI Y+ I L +P+RR TM + +KE TGIDF+ + D +E A
Sbjct: 293 AEKVCGTTTIQYEDKVIDLGKPFRRLTMEDAIKEETGIDFSTIETD----EEAKALAKEK 348
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
G+E +D+ G+++N F+ E K++QPTF++D+PIEISPL K E
Sbjct: 349 GIEYEDRH------KKGDIVNLFFDEFCEDKMIQPTFIMDHPIEISPLTKKKPEDPSKVE 402
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFEL+I G EM NA+SEL DP+DQR R +AQ+ L E D
Sbjct: 403 RFELYINGWEMCNAYSELNDPIDQRERF-------------------AAQDALSEQGDEE 443
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ T D+DF+ ALE GMPP G+G GIDRLVMLLTNSA+IRDV+ FP ++
Sbjct: 444 AQHT-DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSAAIRDVLLFPTMR 492
>gi|228478164|ref|ZP_04062772.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228249843|gb|EEK09113.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 496
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/513 (44%), Positives = 334/513 (65%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS + D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|331091968|ref|ZP_08340800.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402867|gb|EGG82434.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 641
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/532 (43%), Positives = 333/532 (62%), Gaps = 40/532 (7%)
Query: 49 ASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEES 107
A + D +R +R +K+ +L+ G P+ K+D TH + ++++ + +
Sbjct: 2 AEQKNAQEQDINQLRKVRREKLADLQENGKNPFLITKYDVTHHSMEIKDNFEEM------ 55
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
E VS+AGR++++R GK +F ++D G IQ Y ++ + + + + K +DIGDI
Sbjct: 56 --EGKDVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKEFKK-MDIGDI 112
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + RT+ GE+S+ +L+KSL LP+K+HGLT+ D RYRQRYVD+I P+V
Sbjct: 113 VGIKGDVFRTKMGEISIHAQEVTLLSKSLQILPEKFHGLTNTDLRYRQRYVDLIMNPDVK 172
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F KR+KI+S IRK ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ E
Sbjct: 173 DTFIKRSKIISAIRKYLDGQGFMEVETPILVSNAGGAAARPFETHFNALNEDFKLRISLE 232
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L+LKR+++GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + +
Sbjct: 233 LYLKRLIVGGMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRYV 292
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I Y GVE+ L +P+ R TM + VK+ G+D+NE+ LK A+
Sbjct: 293 AQEVLGTTKITYNGVEMDLGKPFERITMVDAVKKYAGVDWNEV-QTLKEAR--------- 342
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
L + K E G++L FE E L+QPTFV+D+PIEISPL K + TE
Sbjct: 343 ALAKEHKVEYEERHKKGDILALFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPDNPEYTE 402
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ G EMANA+SEL DP+DQR R + Q +E L + D+ +
Sbjct: 403 RFEFFMNGWEMANAYSELNDPIDQRERFKAQ------------------EELLAQGDEEA 444
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
T D+DF+ ALE MPP G+G GIDR+ MLLT+SA+IRDV+ FP +K Q
Sbjct: 445 N--TTDEDFMNALEIAMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKSQ 494
>gi|312863664|ref|ZP_07723902.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
gi|322517081|ref|ZP_08069966.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|311101200|gb|EFQ59405.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
gi|322124341|gb|EFX95849.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 496
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/513 (44%), Positives = 333/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGVDPFGKRFERTATSGQLKEKYAD-KTKEELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A V G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKVVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|363897728|ref|ZP_09324266.1| hypothetical protein HMPREF9624_00828 [Oribacterium sp. ACB7]
gi|361958193|gb|EHL11495.1| hypothetical protein HMPREF9624_00828 [Oribacterium sp. ACB7]
Length = 650
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/522 (45%), Positives = 327/522 (62%), Gaps = 40/522 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
D + R K++EL+ +P+ K +TH + +++E + L EN V
Sbjct: 8 QDMNHILKARYDKLKELQDAQADPFVITKAKQTHHSMEIKENFAAL--------ENQQVV 59
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGRV+A+R GK FL ++D G IQ+Y +E L +++ K +DIGDI+ VSG +
Sbjct: 60 IAGRVMAKRVMGKAGFLHVQDRDGKIQVYVSRESLGEEEYKAYKK-LDIGDIVEVSGYVF 118
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
+T+ GE+S+ V+L+KSL PLP+K+HGL D D RYRQRYVD+I + DVF KR++
Sbjct: 119 KTQTGEISIHGEKIVLLSKSLYPLPEKFHGLQDTDTRYRQRYVDLIMNEDSRDVFMKRSQ 178
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I+ EIR + F+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+LKR++I
Sbjct: 179 ILREIRNFLAGRDFLEVETPMLVENAGGAAARPFETHYNALNEDVKLRISLELYLKRLII 238
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A V G L
Sbjct: 239 GGMERVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYNGMMELTESMFRYLAEKVCGTL 298
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I YQG I LE P+RR TM + +KE GIDF+ K+ RAL + +
Sbjct: 299 HISYQGTPIDLESPFRRLTMTDAIKEYAGIDFD------KIQTLEEARALA----KEKEI 348
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E +G++ N FE E KL+QPTF++D+P+ ISPL K ERFELFI G
Sbjct: 349 AYEEHHGIGDIENLFFEEFCEEKLIQPTFIMDHPLSISPLTKKKPSDPTKVERFELFIYG 408
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
REMANA+SEL DP+DQR R + AQ+ L ++ D T D+D
Sbjct: 409 REMANAYSELNDPIDQRERFK-------------------AQDALADAGDEEANHT-DED 448
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ A+E GMPP G+G GIDRLVMLLT++ASIRDV+ FP +K
Sbjct: 449 FLHAMEIGMPPTGGIGYGIDRLVMLLTDAASIRDVLLFPTMK 490
>gi|335030443|ref|ZP_08523933.1| lysine--tRNA ligase [Streptococcus infantis SK1076]
gi|334266186|gb|EGL84670.1| lysine--tRNA ligase [Streptococcus infantis SK1076]
Length = 496
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 334/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +M++TE I+ H A AV G + YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHVAKAVKGDGPVIYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDF---WKDMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|258647028|ref|ZP_05734497.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
gi|260404469|gb|EEW98016.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
Length = 497
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 326/513 (63%), Gaps = 37/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+E++ + G EPY K++ TH + + AN + +HV VAGR++ R
Sbjct: 11 IRRGKLEKIAALGFEPYGGKYECTHHSEDIH------ANAAAFEASGEHVKVAGRIMIIR 64
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK AF TLRD+ G IQLY K+ + ++++ K+ VD+GDILGV G++ T GE ++
Sbjct: 65 GHGKTAFCTLRDEKGDIQLYFRKDTVSENEWNLFKL-VDMGDILGVEGTVFTTHTGETTI 123
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +L+KSL PLP+K+HGLTD ++RYRQRY+D+I+ P+V F KRA ++ IR
Sbjct: 124 RVLHFTMLSKSLRPLPEKWHGLTDKEQRYRQRYLDLIANPDVRKTFIKRANMLQAIRNWY 183
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVLQ GGA ARPF+T+ N+L +YLRIA EL+LKR+L+GG+E+I+EI
Sbjct: 184 TAHGFLEVETPVLQPLYGGANARPFMTHFNALDMTMYLRIAPELYLKRLLVGGYERIFEI 243
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ TRHNPEFT IE Y+AY D +++ TE+IV CA+A G Y+G EI
Sbjct: 244 TRNFRNEGMDTRHNPEFTAIETYQAYGDIDDVIDQTEQIVAACAMASYGTTKFTYEGTEI 303
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PW R TM VK+ TG DF+ K +E RA+ D L + G
Sbjct: 304 DVAGPWPRLTMAEAVKKYTGEDFDA----CKTIEEA--RAICDRLHVE----YGEFDGFG 353
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
LL F+ VE L+QP + ++PIE+SPL+K + T RFE +I GRE+AN FSE
Sbjct: 354 KLLAAAFDDYVEEHLIQPVHITEHPIEVSPLSKLDPKDPRYTIRFESYIYGRELANGFSE 413
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQRAR E QV E+ + DD ++ + D+DF+TALEYGM
Sbjct: 414 LNDPLDQRARFEMQV------------------EEREHGDDEAHPI--DEDFLTALEYGM 453
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRL ML+TNS+SIRD++ FP ++
Sbjct: 454 PPTGGLGIGLDRLFMLMTNSSSIRDILLFPAMR 486
>gi|322418264|ref|YP_004197487.1| lysyl-tRNA synthetase [Geobacter sp. M18]
gi|320124651|gb|ADW12211.1| lysyl-tRNA synthetase [Geobacter sp. M18]
Length = 492
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 325/513 (63%), Gaps = 36/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV-SVAGRVVARR 124
R +KV+ L G+ PY + H++ L++ Y +E EN VAGR++ RR
Sbjct: 11 RRRKVDALWEAGINPYPNDYKPQHTSADLRDAY----GDKEVIEENPQTFVVAGRIIMRR 66
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+FGK AF+ ++D G +QLY +K+ L + F + + + DIGDI+G +G+ RT+ GELS+
Sbjct: 67 SFGKAAFVQVQDRKGRMQLYMKKDTLGEELFAEFENY-DIGDIIGATGTPFRTKTGELSL 125
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+S +LTKSLLPLP+K+HGLTDV+ RYRQRYVD+I PEV +VF KR++IV IR+ +
Sbjct: 126 AVSSVRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPEVREVFYKRSRIVQLIREFM 185
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
F+EVETP++Q GGA A+PFVT+HN+L +L+LRIA EL+LKR+++GGFE+++EI
Sbjct: 186 TRKDFLEVETPMMQQIPGGATAKPFVTHHNALDMELFLRIAPELYLKRLVVGGFERVFEI 245
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+S RHNPEFT +E Y+AY+ ++ +MN TEE++ H + G L Y G I
Sbjct: 246 NRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVTQELLGTLDFTYGGEPI 305
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+RPW+R T+ + E ID AK R L K + G
Sbjct: 306 SFQRPWKRFTVKEAILEYGDID----------AKSLEDRDLAYAYAQKIGLELPEDIGYG 355
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L+ E+FE V E KL+QPTF+ +YP E+SPL++ +RFE F GREMANAFSE
Sbjct: 356 KLITEIFEEVAEAKLIQPTFITNYPTEVSPLSRKSDHDPEYVDRFEFFCAGREMANAFSE 415
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP DQ+ R QV +A++K E + +D+D++ ALEYG+
Sbjct: 416 LNDPRDQKERFLAQV---------------AAKDKGDEEAHY-----MDEDYIRALEYGL 455
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G G+GIDRLVMLLT+S SIRDVI FP L+
Sbjct: 456 PPTAGEGIGIDRLVMLLTDSPSIRDVILFPQLR 488
>gi|303230964|ref|ZP_07317707.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302514346|gb|EFL56345.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 504
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 327/513 (63%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A +++ + N E+ +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDHAKDIKDDF--------LNYEDQPTVIAGRLMTMR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD +G IQ+Y K+ L D + +K+ +DIGDI+G+ G + RT GE+++
Sbjct: 70 SHGKTAFANIRDLTGDIQVYFRKDVLGEDNYKYVKM-LDIGDIVGIEGHVFRTHSGEVTI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+K+L PLP+K+HGL D + RYRQRYVD+I PEV D F KR+KIV++IR+ +
Sbjct: 129 KVNKLTLLSKALRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFIKRSKIVAKIREYM 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG E+++E+
Sbjct: 189 MNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMERVFEM 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 249 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 309 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTENDGIG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 359 KILNACFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFV ALEYG+
Sbjct: 419 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVNALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 459 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 491
>gi|282856149|ref|ZP_06265432.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282585908|gb|EFB91193.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 518
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/527 (44%), Positives = 334/527 (63%), Gaps = 36/527 (6%)
Query: 53 STSTSDREAVRALRIKKVEELRSK-GLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSE 110
+ T + E +R RI K+ LR + G P+ KW+ H+ Q+++ + +L EE+ E
Sbjct: 5 AAGTQETEILRQ-RIDKLRRLREEEGYNPFENEKWNVDHTVAQVRKDFDYL-KAEEAVPE 62
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGV 170
S+AGR++ R GK AF+ ++D++GTIQLY + L + K ++D GDI+G+
Sbjct: 63 A-KFSMAGRLMTLRRQGKAAFVNMQDETGTIQLYFRYDTLGEKDYTFFKKWLDSGDIIGI 121
Query: 171 SGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVF 230
G RT++GEL+V V F +LTK+L PLP+K+HGLTD++ RYR+RY+D+I PE +VF
Sbjct: 122 VGHPFRTQRGELTVAVERFRLLTKALRPLPEKWHGLTDLEIRYRKRYLDLIVNPEAREVF 181
Query: 231 RKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHL 290
RKRAKI+S R +E G +EVETPVL AGGA ARPF+TYHN+LG ++YLRIATEL+L
Sbjct: 182 RKRAKIISTFRAVLEKHGTLEVETPVLSYLAGGANARPFITYHNALGANMYLRIATELYL 241
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++G ++YEI + FRNEG+ HNPEFT +E+Y Y+DY MMN+TEE++ +A
Sbjct: 242 KRLVVGMMGRVYEISKDFRNEGMDLTHNPEFTMMEVYWPYADYVDMMNLTEELIRESCIA 301
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
NG I+ GV + +P+RR TM LVKE G+DF ++ ++ A++
Sbjct: 302 ANGTPVIERNGVMLDFAKPFRRATMVELVKENCGVDFADITDE--EARDAA--------- 350
Query: 411 NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
K+K I S +L E VE KLVQPTFV+ +P+EISPL+K H T RFE
Sbjct: 351 RKNKIEITGHESRFKILTMFMEAFVEEKLVQPTFVMGHPVEISPLSKKDPEHPDYTHRFE 410
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LF CG+E++N +SEL DP+DQ+ R +Q ++ E E + H +
Sbjct: 411 LFCCGKELSNGYSELNDPIDQKNRFLDQTQKKTE----------------GEDETHPF-- 452
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFV ALE G+PP G+G+G+DR+VM LTN SIRDVI FP +K
Sbjct: 453 --DEDFVEALEQGLPPTGGLGIGMDRVVMFLTNCRSIRDVIFFPTMK 497
>gi|258646083|ref|ZP_05733552.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403458|gb|EEW97005.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
Length = 631
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 326/513 (63%), Gaps = 37/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+E++ + G EPY K++ TH + + AN + +HV VAGR++ R
Sbjct: 11 IRRGKLEKIAALGFEPYGGKYECTHHSEDIH------ANAAALEASGEHVKVAGRIMIIR 64
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK AF TLRD+ G IQLY K+ + ++++ K+ VD+GDILGV G++ T GE ++
Sbjct: 65 GHGKTAFCTLRDEKGDIQLYFRKDTVSENEWNLFKL-VDMGDILGVEGTVFTTHTGETTI 123
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V F +L+KSL PLP+K+HGLTD ++RYRQRY+D+I+ P+V F KRA ++ IR
Sbjct: 124 RVLHFTMLSKSLRPLPEKWHGLTDKEQRYRQRYLDLIANPDVRKTFIKRANMLQAIRNWY 183
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVLQ GGA ARPF+T+ N+L +YLRIA EL+LKR+L+GG+E+I+EI
Sbjct: 184 TAHGFLEVETPVLQPLYGGANARPFMTHFNALDMTMYLRIAPELYLKRLLVGGYERIFEI 243
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ TRHNPEFT IE Y+AY D +++ TE+IV CA+A G Y+G EI
Sbjct: 244 TRNFRNEGMDTRHNPEFTAIETYQAYGDIDDVIDQTEQIVAACAMASYGTTKFTYEGTEI 303
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ PW R TM VK+ TG DF+ K +E RA+ D L + G
Sbjct: 304 DVAGPWPRLTMAEAVKKYTGEDFDA----CKTIEEA--RAICDRLHVE----YGEFDGFG 353
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
LL F+ VE L+QP + ++PIE+SPL+K + T RFE +I GRE+AN FSE
Sbjct: 354 KLLAAAFDDYVEEHLIQPVHITEHPIEVSPLSKLDPKDPRYTIRFESYIYGRELANGFSE 413
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQRAR E QV E+ + DD ++ + D+DF+TALEYGM
Sbjct: 414 LNDPLDQRARFEMQV------------------EEREHGDDEAHPI--DEDFLTALEYGM 453
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRL ML+TNS+SIRDV+ FP ++
Sbjct: 454 PPTGGLGIGLDRLFMLMTNSSSIRDVLLFPAMR 486
>gi|335046397|ref|ZP_08539420.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 108 str. F0425]
gi|333760183|gb|EGL37740.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 108 str. F0425]
Length = 648
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/522 (45%), Positives = 327/522 (62%), Gaps = 40/522 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
D + R K++EL+ +P+ K +TH + +++E + L EN V
Sbjct: 8 QDMNHILKARYDKLKELQDAQADPFVITKAKQTHHSMEIKENFAAL--------ENQQVV 59
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGRV+A+R GK FL ++D G IQ+Y +E L +++ K +DIGDI+ VSG +
Sbjct: 60 IAGRVMAKRVMGKAGFLHVQDRDGKIQVYVSRESLGEEEYKAYKK-LDIGDIVEVSGYVF 118
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
+T+ GE+S+ V+L+KSL PLP+K+HGL D D RYRQRYVD+I + DVF KR++
Sbjct: 119 KTQTGEISIHGEKIVLLSKSLYPLPEKFHGLQDTDTRYRQRYVDLIMNEDSRDVFMKRSQ 178
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I+ EIR + F+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+LKR++I
Sbjct: 179 ILREIRNFLAGRDFLEVETPMLVENAGGAAARPFETHYNALNEDVKLRISLELYLKRLII 238
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A V G L
Sbjct: 239 GGMERVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYNGMMELTESMFRYLAEKVCGTL 298
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I YQG I LE P+RR TM + +KE GIDF+ K+ RAL + +
Sbjct: 299 HISYQGTPIDLESPFRRLTMTDAIKEYAGIDFD------KIQTLEEARALA----KEKEI 348
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E +G++ N FE E KL+QPTF++D+P+ ISPL K ERFELFI G
Sbjct: 349 AYEEHHGIGDIENLFFEEFCEEKLIQPTFIMDHPLSISPLTKKKPTDPEKVERFELFIYG 408
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
REMANA+SEL DP+DQR R + AQ+ L ++ D T D+D
Sbjct: 409 REMANAYSELNDPIDQRERFK-------------------AQDALADAGDEEANHT-DED 448
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ A+E GMPP G+G GIDRLVMLLT++ASIRDV+ FP +K
Sbjct: 449 FLHAMEIGMPPTGGIGYGIDRLVMLLTDAASIRDVLLFPTMK 490
>gi|340754161|ref|ZP_08690925.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|229423693|gb|EEO38740.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
Length = 493
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/523 (44%), Positives = 342/523 (65%), Gaps = 44/523 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++ + K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKAFGSKYDKQ---IMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L ++FD + +++GDI+GV G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGENEFDHIVKMLNVGDIIGVEGELFVT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I PEV D F KR +I+
Sbjct: 120 HTEELTLRVKSISLLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
++K ++ GF+EVETP++ GGA A+PFVT+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KAVKKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++++ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFHDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDK 414
+Y GV++ L + ++R M +++K+ TG+DF + K+AKE +
Sbjct: 300 EYDGVQLSL-KNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVE----------- 347
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V + SVG+++NE FE E ++VQPTFV +P+EISPLAK + ++ T+RFELFI
Sbjct: 348 -VADHMDSVGHVINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAF+EL DP DQR R E QV +E L+ +++ + E+ D+
Sbjct: 407 KREYANAFTELNDPADQRGRFEAQV-----------------EEALRGNEEATPEI--DE 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
FV ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 448 SFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|319946598|ref|ZP_08020832.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
gi|319746646|gb|EFV98905.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
Length = 496
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 332/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT + QL+E Y L + E+ + N+ +AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTADSGQLKEKYSEL-DKEQLHDLNETAIIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGASARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+ +AY+DYQ +M++TE I+ H A A++G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVDQAYADYQDIMDLTEGIIQHAAKAIHGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE G+DF + D+ + L + K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEIAGVDFWQ---DMSFEEAVAL------AKEKHVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEYVEETLTQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ R E Q R A+E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLERFEAQAR---------------AKEL---GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|419707182|ref|ZP_14234678.1| Lysyl-tRNA synthetase [Streptococcus salivarius PS4]
gi|383283090|gb|EIC81058.1| Lysyl-tRNA synthetase [Streptococcus salivarius PS4]
Length = 496
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/513 (44%), Positives = 333/513 (64%), Gaps = 31/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL++ Y EE + ND ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKDKYADKTK-EELHEINDTATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + + K D+GD LG+ G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKK-ADLGDFLGIEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS + D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAAKPFITHHNAQDIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +MN+TE I+ H A AV G I+YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + + A K+ V + VG
Sbjct: 313 KINEPFKRIHMVDAIKEITGVDFWQ---DMTLDEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ +R E Q AA E DD + +D D+V ALEYGM
Sbjct: 424 LNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYGM 463
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 464 PPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|294795203|ref|ZP_06760337.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
gi|294453995|gb|EFG22370.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 505
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 328/513 (63%), Gaps = 38/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++E + +G+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDYAKDIKEDFFLKYDGQP-------VVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L D + +K+ +DIGDI+GV G + +T GE+++
Sbjct: 71 SHGKTAFANIRDKSGDIQVYFRKDVLGEDAYKYVKM-LDIGDIIGVEGHVFKTHTGEVTI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR++IV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYM 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG ++++E+
Sbjct: 190 MRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMDRVFEM 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 250 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 310 NLTPPWNRITMAEGVKKYTGEDFD------AVTTIEEARAIADRLNVE----YTENDGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 360 KILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|385810141|ref|YP_005846537.1| Class II lysyl-tRNA synthetase [Ignavibacterium album JCM 16511]
gi|383802189|gb|AFH49269.1| Class II lysyl-tRNA synthetase [Ignavibacterium album JCM 16511]
Length = 502
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/529 (44%), Positives = 337/529 (63%), Gaps = 63/529 (11%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R ++++EL+ G+EP+AY++D + ++ ++ + E+ V +AGR++A R
Sbjct: 16 RFEELDELKKMGIEPFAYEFDVNSDSEDIKNNFK--------DDEHRIVKIAGRIMAIRR 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK +F ++D G IQ+Y +K+ L ++ +D K+ +DIGDI+GV G + +T+ GE+SV
Sbjct: 68 MGKASFAHIQDHKGRIQIYLKKDEL-AEMYDAFKL-MDIGDIIGVEGFVFKTKTGEISVH 125
Query: 186 VNSFVILTKSLLPLPDK------------YHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
V+L K L P+P Y D + RYRQRYVD++ P+V DVF KR
Sbjct: 126 TQKLVLLAKGLRPIPIAKEVIDENGNKIIYDQFADKELRYRQRYVDLVVNPDVKDVFIKR 185
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
+KI+S IR+ ++S G +EVETP+LQ GGA ARPF+T+HN+L DLYLRIA EL+LKR+
Sbjct: 186 SKIISTIREFLDSKGLLEVETPILQPLYGGAAARPFITHHNALDIDLYLRIADELYLKRL 245
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGF +YEI + FRNEG+ HNPEFT +E+Y Y DY MMN EE+ + V G
Sbjct: 246 IVGGFNGVYEISKDFRNEGMDRSHNPEFTMLELYVPYKDYNWMMNFVEELFEYVCTKVFG 305
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLK----VAKETTLRALGDGL 409
L Y ++I RPW+R +M ++E TG+ N + +D++ VAK+ ++ GL
Sbjct: 306 TLKFTYDNLQIDFSRPWKRISMIEAIEEKTGV--NVIKSDIETLTTVAKKLSIDVA--GL 361
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
+K K L++E+F VE +L+QPTFVLDYP+E+SPLAK HR G+ ERF
Sbjct: 362 NSKAK-----------LIDEIFSAAVEGELIQPTFVLDYPVELSPLAKKHRTKEGVVERF 410
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES-DDHSY 528
E ++ G+E+ NAFSEL DPLDQRAR EEQV K++E+ DD ++
Sbjct: 411 EAYVVGKEICNAFSELNDPLDQRARFEEQV-------------------KMREAGDDEAH 451
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ D+DF+ ALEYGMPP +G+G+GIDRLVM+LTN SIRDVI FP +K
Sbjct: 452 QI--DEDFLRALEYGMPPTAGLGIGIDRLVMILTNQPSIRDVIFFPQMK 498
>gi|422315944|ref|ZP_16397356.1| lysyl-tRNA synthetase [Fusobacterium periodonticum D10]
gi|404591749|gb|EKA93795.1| lysyl-tRNA synthetase [Fusobacterium periodonticum D10]
Length = 493
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/523 (44%), Positives = 342/523 (65%), Gaps = 44/523 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++ + K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKAFGSKYDKQ---IMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L ++FD + +++GDI+GV G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGENEFDHIVKMLNVGDIIGVEGELFVT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RY+D+I PEV D F KR +I+
Sbjct: 120 HTEELTLRVKSISLLTKNVRSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRDTFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
++K ++ GF+EVETP++ GGA A+PFVT+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KAVKKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++++ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFHDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDK 414
+Y GV++ L + ++R M +++K+ TG+DF + K+AKE +
Sbjct: 300 EYDGVQLSL-KNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVE----------- 347
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V + SVG+++NE FE E ++VQPTFV +P+EISPLAK + ++ T+RFELFI
Sbjct: 348 -VADHMDSVGHVINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAF+EL DP DQR R E QV +E L+ +++ + E+ D+
Sbjct: 407 KREYANAFTELNDPADQRGRFEAQV-----------------EEALRGNEEATPEI--DE 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
FV ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 448 SFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|260584307|ref|ZP_05852054.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
gi|260157825|gb|EEW92894.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
Length = 501
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/518 (44%), Positives = 336/518 (64%), Gaps = 37/518 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ +LR KG+EP++ + + S ++ + + + E V +AGR++ +R
Sbjct: 17 VRREKMHQLREKGVEPFSTGFKQKQSTEEIHQQFEGATKESLAEQEEVTVQIAGRIMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G IQ+Y K+ ++ D+ +L D+GDI+GV G++ T GELSV
Sbjct: 77 GKGKAGFAHIQDGKGQIQIYVRKD-VVGDEAYELFDKADLGDIVGVVGTVMVTNTGELSV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
FV LTK+L PLPDKYHGLT+V+++YRQRY+D+IS + D F R+KI+ EIR +
Sbjct: 136 KATQFVHLTKALRPLPDKYHGLTNVEQQYRQRYLDLISNRDSMDRFVTRSKIIREIRHYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S ++EVETPVL AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG E++YEI
Sbjct: 196 DSRDYLEVETPVLHTLAGGANARPFITHHNALDMELYMRIAPELHLKRLVVGGMERVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT+IE+Y AY+DYQ +M++TE IV+ A V GK + Y E+
Sbjct: 256 GRVFRNEGIDTTHNPEFTSIEIYTAYTDYQDVMDLTEGIVSSVAQEVLGKTKVPYGEYEV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
L+ PW+R M + +KE TG+DF D + +AKE ++ +E S
Sbjct: 316 ELKAPWKRVHMVDAIKEVTGVDFWVEMTDEEARAIAKEKGVK-------------VEDSM 362
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+ G+++NE FE VE L+QPTF+ +P+ +SPLA+ + T+RFE FIC +E AN
Sbjct: 363 TYGHVVNEFFETFVEETLIQPTFIYGHPVAVSPLARKNDEDPRFTDRFECFICTKEYANG 422
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+ELTDP+DQR R +QV E+ + +D ++ LD+DFV ALE
Sbjct: 423 FTELTDPIDQRERFMKQV------------------EEKETGNDEAH--PLDEDFVQALE 462
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
YG+ P G+G+GIDRLVMLLTNS SIR+V+ FP +K Q
Sbjct: 463 YGLSPTGGVGIGIDRLVMLLTNSQSIRNVLLFPTMKHQ 500
>gi|340756904|ref|ZP_08693508.1| lysyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
gi|251834171|gb|EES62734.1| lysyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
Length = 493
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/512 (46%), Positives = 331/512 (64%), Gaps = 38/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
+ KKVEEL+ G++P+ K+D+ + +I H + EN AGR++A R
Sbjct: 17 KWKKVEELKELGVKPFGSKFDKKYMVG---DILTH------TPEENLKYKTAGRIMAYRG 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F + D +G IQLY K+ L + F+ + + +GDI+GV G + T GEL++
Sbjct: 68 KGKTLFAHIEDRTGRIQLYLRKDELGDEVFEMVNK-IGVGDIVGVEGELFVTHTGELTLR 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V S +L+K++ PLP+K+HGLTDV+ RYR+RYVD+I +V D F KR +I+ IR+ ++
Sbjct: 127 VTSIQLLSKNIRPLPEKFHGLTDVETRYRKRYVDLIMNKDVRDTFIKRTQIIKGIREILD 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++ GGA A+PF+T+HN+L DLY+RIA EL+LKR+++GG EK+YE+G
Sbjct: 187 NKGFLEVETPLMHPILGGAAAKPFITHHNALNVDLYMRIAPELYLKRLIVGGLEKVYELG 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+STRHNPEFT IE+Y+AY+D+ MM++ EEI+T A V G T++Y G +
Sbjct: 247 RNFRNEGMSTRHNPEFTMIELYQAYADFNDMMDLAEEIITTLAKKVLGTTTVEYNGKTLV 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
LE ++R M + VKE TG+DF + + AK AL + V + SVG+
Sbjct: 307 LEN-FKRIHMVDFVKEVTGVDFWDQNMTFEEAK-----ALA---KQHHVEVADHMNSVGH 357
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++N+ FE E K+VQPTFV +P+EISPLAK + T+RFELFI RE ANAFSEL
Sbjct: 358 VVNQFFEEKCEEKIVQPTFVYGHPVEISPLAKRNEEDPRFTDRFELFIDAREYANAFSEL 417
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP DQR R E+QV E+ + +D + V +DDDFV ALEYG+P
Sbjct: 418 QDPADQRGRFEDQV------------------EEAERGNDEATPV-IDDDFVEALEYGLP 458
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P GMG+GIDRL+MLLT S SIRDV+ FP +K
Sbjct: 459 PTGGMGIGIDRLIMLLTQSDSIRDVLLFPQMK 490
>gi|385260307|ref|ZP_10038455.1| lysine--tRNA ligase [Streptococcus sp. SK140]
gi|385191571|gb|EIF38984.1| lysine--tRNA ligase [Streptococcus sp. SK140]
Length = 496
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/514 (44%), Positives = 335/514 (65%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ Y L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DAQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+Q +M++TE I+ H A AV G + YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVIYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ ++R M + +KE TG+DF D+ + + A K+ V + VG
Sbjct: 313 KINELFKRVHMVDAIKEITGVDF---WKDMTFEEAKAIAA------EKNVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|387154045|ref|YP_005702981.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|311234489|gb|ADP87343.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 527
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K EL G+ Y + + H + Y L + +E + + ++AGR+V+ R+
Sbjct: 44 RVVKTCELLDAGVSAYPNGFIKKHDIAPVLAEYEGL-DADELETVDAAFTMAGRIVSHRS 102
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+AF + D +G +Q Y +E L + + K +DIGDI+GVSG + RT+ GEL++
Sbjct: 103 FGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKK-LDIGDIVGVSGRLFRTKTGELTLS 161
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+LTKS+ PLP+KYHGL DV+ RYRQRYVD+I P D+FRKR IV E R+ +E
Sbjct: 162 CTEVRLLTKSIRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLE 221
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++Q GGA A+PFVT+HN+L LY+RIA EL+LKR+L+GGFEK++EI
Sbjct: 222 ARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLYMRIAPELYLKRLLVGGFEKVFEIN 281
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT E Y AY+ ++ +M++TEE+ +H A V G I YQG E+
Sbjct: 282 RNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVD 341
Query: 366 LER-PWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R T H + E G E ND + + +R G+ + +K +G
Sbjct: 342 LTPGKWVRLTFHESL-EKVGGHSPEFYNDYEKVR-AYVRERGEKVLQGEK--------LG 391
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F++ VEP+L+QPTF+ YP +ISPL++ + ++ +T+RFELFI GRE+ANAFSE
Sbjct: 392 KLQAKLFDLDVEPRLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSE 451
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QV+ EK A DD ++ +D+D++ ALEYGM
Sbjct: 452 LNDPVDQRMRFEDQVK---EKEAG---------------DDEAH--FMDEDYLRALEYGM 491
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+S SIR+VI FP+LK
Sbjct: 492 PPAAGQGVGIDRLVMLLTDSPSIREVILFPLLK 524
>gi|196250797|ref|ZP_03149484.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|196209747|gb|EDY04519.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 447
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/473 (46%), Positives = 316/473 (66%), Gaps = 31/473 (6%)
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
EE + V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+
Sbjct: 4 EELEEQQIEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDL 62
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+GV G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL DV++RYRQRY+D+ P
Sbjct: 63 GDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDVEQRYRQRYLDLTMNP 122
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
+ F R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RI
Sbjct: 123 QSKQTFITRSLIIQSMRRYLDSQGYLEVETPMMHAIAGGAAARPFITHHNALDMTLYMRI 182
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A ELHLKR+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++
Sbjct: 183 AIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLI 242
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRA 404
H A V G I Y + L WRR M + +KE G+DF +D +E A
Sbjct: 243 AHIATEVLGTTKIQYGEHTVDLTPEWRRLHMVDAIKEYVGVDFWRHMDD----EEARALA 298
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
G+E I + G+++NE FE VE +L+QPTF+ +P+EISPLAK +
Sbjct: 299 KEHGVE------IAPHMTFGHIVNEFFEQKVESQLIQPTFIYGHPVEISPLAKKNPDDPR 352
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
T+RFELFI GRE ANAF+EL DP+DQR R E Q+++ ++ +
Sbjct: 353 FTDRFELFIVGREHANAFTELNDPIDQRQRFEAQLKER------------------EQGN 394
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D ++E +D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 395 DEAHE--MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 445
>gi|297569276|ref|YP_003690620.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296925191|gb|ADH86001.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 492
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/517 (46%), Positives = 336/517 (64%), Gaps = 35/517 (6%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A R +K EEL G+ YA + H L N E+ ++VAGRV+A
Sbjct: 9 AQRRQKAEELAGLGVNLYANDFKPGHRITDLLPA----GNDPEAPLAAGTMAVAGRVMAL 64
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R FGK AFL ++D+SG IQ++ +++ + + F K +DIGDI+ +G + RT+ GE++
Sbjct: 65 RKFGKAAFLHIQDESGRIQIHIKRDEVGDEPFAVFKK-IDIGDIVAFTGPLFRTKTGEVT 123
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ S +LTKSL PLP+K+HGLTD++ RYRQRYVD++ PEV D FRKR +I+ IR
Sbjct: 124 IQALSLRLLTKSLRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRKRVEIIRLIRDF 183
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++Q AGGA A+PF T+HN+LG DLYLRIA EL+LKR+L+GG E+++E
Sbjct: 184 LSNRGFMEVETPMMQAIAGGATAKPFKTHHNALGLDLYLRIAPELYLKRLLVGGLERVFE 243
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
I R FRNEGLSTRHNPEFT +E Y+AY+ Y+ +M +TEE+++ + V G + I YQG
Sbjct: 244 INRNFRNEGLSTRHNPEFTMLEFYQAYATYEELMELTEEMISWVTMEVCGSMQISYQGQA 303
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L PWRR TM +++ G+ EL D T L+AL ++ V++ +
Sbjct: 304 VDLAPPWRRYTMDEALQQIGGLS-PELLTDF-----TALKALA----HRHGIVLQPQAGI 353
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G + E+FE +VE KLV PTF+ YP E+SPLA+ + +T+RFELFI GRE+ANAFS
Sbjct: 354 GKVKTELFECLVEEKLVDPTFITAYPTEVSPLARKNEDDPEITDRFELFITGREVANAFS 413
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP DQR RL +Q+ + E D+ + V LD+D++ ALEYG
Sbjct: 414 ELNDPDDQRRRLIKQIEERGE-------------------DEEIFPV-LDEDYLRALEYG 453
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPPA+G G+GIDRL MLLT+S SIRDVI FP L+ ++
Sbjct: 454 MPPAAGEGIGIDRLTMLLTDSPSIRDVILFPHLRPEK 490
>gi|28209978|ref|NP_780922.1| lysyl-tRNA synthetase [Clostridium tetani E88]
gi|39932178|sp|Q899G7.1|SYK_CLOTE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|28202413|gb|AAO34859.1| lysyl-tRNA synthetase [Clostridium tetani E88]
Length = 502
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/513 (44%), Positives = 328/513 (63%), Gaps = 37/513 (7%)
Query: 66 RIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
R +K +L+++G +P+ K +RTH++ +++ + L E+ V+VAGR++++R
Sbjct: 22 RRQKFFDLQAEGKDPFEVTKVERTHTSEEIKSNFEEL--------EDKEVTVAGRLMSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F + D G IQLY + + ++ + K F DIGD + ++G++ +T GE+S+
Sbjct: 74 VHGKAGFSDIHDRYGKIQLYIKINDVGEERLKEYKSF-DIGDFVTITGTVFKTRTGEVSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ F ++ KSL PLP+K+HGL D D RYRQRYVD+I +V D F KR KI+ +R+ +
Sbjct: 133 HITDFKLIAKSLKPLPEKWHGLKDPDLRYRQRYVDLIVNEDVRDTFMKRTKIIKYMREFL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ ++EVETPVL AGGA ARPF T+HN+L D+YLRIATEL+LKR+++GGFEK+YEI
Sbjct: 193 DAKDYIEVETPVLSPIAGGAAARPFTTHHNALDIDMYLRIATELYLKRLIVGGFEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
G+ FRNEG+ RHNPEFT IE+YEAY+DY MM ITE +V + A V G + Y+ EI
Sbjct: 253 GKNFRNEGIDIRHNPEFTMIELYEAYADYNDMMEITENMVAYIAEKVCGNTKVKYEETEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
PW+R TM + VKE +G+DFNE+ D +E G E K K +
Sbjct: 313 EFRPPWKRITMVDSVKEYSGVDFNEIKTD----EEARELVKGKDFELKKKL---EDCTKA 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV DYP+EISPL+K + TERFE F+ GRE+ NA++E
Sbjct: 366 DILNLFFEEYVEKNLIQPTFVCDYPVEISPLSKKKNDNPEYTERFEGFVYGRELCNAYTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+ Q+ R +Q+++ + DD ++ +D+DF+ ALE GM
Sbjct: 426 LNDPIVQKERFIQQLKER------------------ELGDDEAF--MMDEDFINALEIGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+G+DRLVM LT+S SIRDVI FP +K
Sbjct: 466 PPTGGLGIGVDRLVMFLTDSHSIRDVILFPTMK 498
>gi|335049834|ref|ZP_08542818.1| lysine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|333762111|gb|EGL39623.1| lysine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 503
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/530 (45%), Positives = 334/530 (63%), Gaps = 42/530 (7%)
Query: 52 SSTSTSDREAVR---ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
+ T+ +D E + +R +K+E+ + G+ P+ K++ H A +++
Sbjct: 7 TDTTAADIEKLNDQMHVRREKMEQFAAAGVYPFGEKYEWDHHAADVKQ------AATTLE 60
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V +AGR++A R GK AF LRD SG IQ+Y K+ L D + K+ +DIGDI+
Sbjct: 61 TAATVVHLAGRLMAIRRHGKTAFCVLRDISGEIQVYFRKDLLGEDSYTLFKL-LDIGDII 119
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G++ T GE ++ V+ + +LTK+L PLP+K+HGLTD + RYRQRY+D+I PEV D
Sbjct: 120 GVEGTVFTTHTGETTIRVSDWKLLTKALRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKD 179
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI+ IR+ ++ GF+EVETP+L AGGA ARPF TYH++L D+YLRIA EL
Sbjct: 180 TFIKRSKIIKGIRRYLDERGFLEVETPMLHTIAGGAAARPFKTYHHALDMDMYLRIAPEL 239
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+L+GG E++YE+ R FRNEG+ TRHNPEFTT+E+Y+A+ D + ++ ITE+IV A
Sbjct: 240 HLKRLLVGGLERVYEMNRCFRNEGIDTRHNPEFTTVELYQAFGDLEDVIAITEDIVATLA 299
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
+ G I Y EI L PW+R TM V E TG DF + DL A+ A+ D
Sbjct: 300 KQLYGTTKITYLDTEIDLTPPWKRMTMIEAVAEFTGKDFTGV-TDLAAAQ-----AIADE 353
Query: 409 LE-NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
L+ KF +G ++N FE VE KL+QPT + +P+EISPL K R + LT
Sbjct: 354 LQVPYGKF-----DGIGKIINACFEEYVEEKLIQPTIITGHPLEISPLTKQQRENPLLTY 408
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE FI GRE+AN FSEL DPLDQR R Q+ E+ + DD +
Sbjct: 409 RFEAFIYGRELANGFSELNDPLDQRRRFTAQM------------------EERERGDDEA 450
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ +D+D+ ALEYG+PP G+G+GIDRLVM LT+SASIRDV+ FP +K
Sbjct: 451 HQ--MDEDYCRALEYGLPPTGGLGIGIDRLVMFLTDSASIRDVLLFPTMK 498
>gi|310778303|ref|YP_003966636.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309747626|gb|ADO82288.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 494
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/512 (45%), Positives = 332/512 (64%), Gaps = 37/512 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
+ +KV+E++ GLEP+ K+D+ H + E+ H E+S AGR++A R
Sbjct: 17 KWEKVKEIKEAGLEPFGRKYDKKH---MVGELLSHTLKEEDSTV----FKTAGRIMACRG 69
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F + D++G IQ+Y K+ L F+ +K + GD +GV GS+ T+KGEL++
Sbjct: 70 QGKAVFAHIEDETGRIQVYLRKDTLGDKVFEIVKK-MGTGDFVGVEGSLFVTKKGELTLR 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V F L+K++ PLP+KYHGLTDV+ RYR+RY+D++ EV + F KR +IV+ ++ +
Sbjct: 129 VAGFEFLSKNIRPLPEKYHGLTDVETRYRKRYLDLVMNKEVKETFVKRIQIVNSVKTLLN 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S GF+EVETP++ GGA A+PFVT+HN+L LYLRIA EL+LKR+++GGF+K+YEI
Sbjct: 189 SKGFMEVETPIMHPIVGGASAKPFVTHHNTLDMTLYLRIAPELYLKRLIVGGFDKVYEIN 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+STRHNPEFT +E+Y+AY+D+ MM++TEEI+ + A +NG T++Y G E+
Sbjct: 249 RSFRNEGISTRHNPEFTMMELYQAYADFNDMMDLTEEIIMNAAKTINGTTTVEYNGKELV 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
LE ++R M + VKE TG DF D+ V L + + + +VG+
Sbjct: 309 LEN-FKRVHMVDFVKEITGADF---WGDVSVEDARLL------AKQNNVVLAPHMNTVGH 358
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++NE FE E ++QPTFV +P+EISPLAK + T+RFELFI RE ANAFSEL
Sbjct: 359 IINEFFEQKCEEHIIQPTFVYGHPVEISPLAKRNADDHRFTDRFELFIDAREYANAFSEL 418
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP DQR RLE Q+ + A +E+++A+ +DDD++ ALEYGMP
Sbjct: 419 NDPADQRGRLEAQLEE-----AMLGNEEANAE--------------IDDDYIEALEYGMP 459
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+GIDRLVMLLT + SIRDVI FP ++
Sbjct: 460 PTGGLGVGIDRLVMLLTGAPSIRDVILFPQMR 491
>gi|259501967|ref|ZP_05744869.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
gi|259170144|gb|EEW54639.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
Length = 500
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 329/515 (63%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+ G+EP+ ++ R H A L + Y + +E N + + V++AGR+ +R
Sbjct: 3 VRREKMEELKEAGIEPFGRRFKRDHLAQDLHDEYDQY-DKDELNEKGEMVTIAGRMTRKR 61
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK F D +G IQ+Y K+ + +Q+ K DIGD LG+ G + +T GEL+V
Sbjct: 62 SSGKAGFADFVDRTGKIQVYARKDMVGDEQYHIFKR-ADIGDFLGIEGDVIKTNTGELTV 120
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ L+K+L PLP+K+ G+TD + YRQRY+D+IS PE F +R I+ +R+ +
Sbjct: 121 RAHKITFLSKALRPLPNKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVREYM 180
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF EVETP+L AGGA ARPFVT+HN+L D+YLRIATEL+LKR+++GGFE++YE+
Sbjct: 181 DDHGFTEVETPILNTQAGGANARPFVTHHNALDIDMYLRIATELYLKRLIVGGFERVYEL 240
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTT+E Y AY D+Q +M+ TE IV A V+ I YQG EI
Sbjct: 241 GRIFRNEGMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGREI 300
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP--S 422
L ++R TM + VKE TGIDF G+D + A ++ IE P +
Sbjct: 301 DLGGDFKRITMVDAVKEKTGIDF---GDDAMTDDDAKKLA--------EEHKIEFKPYWT 349
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LN FE VE L+QPTFV +YP+E+SPLAK ++ + +T+RFEL++ G E+ NAF
Sbjct: 350 KGHILNAFFEEYVEDTLIQPTFVYEYPVEVSPLAKRNKDNPAMTDRFELYVDGSELGNAF 409
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R E Q A+EK +D+ +D D+V ALEY
Sbjct: 410 SELNDPIDQKERFEMQ-----------------AKEKANGNDEAE---PVDLDYVQALEY 449
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT++ SIRDVI FP ++
Sbjct: 450 GMPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 484
>gi|304569719|ref|YP_011589.2| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
Length = 514
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K EL G+ Y + + H + Y L + +E + + ++AGR+V+ R+
Sbjct: 31 RVVKTCELLDAGVSAYPNGFIKKHDIAPVLAEYEGL-DADELETVDAAFTMAGRIVSHRS 89
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+AF + D +G +Q Y +E L + + K +DIGDI+GVSG + RT+ GEL++
Sbjct: 90 FGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKK-LDIGDIVGVSGRLFRTKTGELTLS 148
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+LTKS+ PLP+KYHGL DV+ RYRQRYVD+I P D+FRKR IV E R+ +E
Sbjct: 149 CTEVRLLTKSIRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLE 208
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++Q GGA A+PFVT+HN+L LY+RIA EL+LKR+L+GGFEK++EI
Sbjct: 209 ARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLYMRIAPELYLKRLLVGGFEKVFEIN 268
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT E Y AY+ ++ +M++TEE+ +H A V G I YQG E+
Sbjct: 269 RNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVD 328
Query: 366 LER-PWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R T H + E G E ND + + +R G+ + +K +G
Sbjct: 329 LTPGKWVRLTFHESL-EKVGGHSPEFYNDYEKVR-AYVRERGEKVLQGEK--------LG 378
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F++ VEP+L+QPTF+ YP +ISPL++ + ++ +T+RFELFI GRE+ANAFSE
Sbjct: 379 KLQAKLFDLDVEPRLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSE 438
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QV+ EK A DD ++ +D+D++ ALEYGM
Sbjct: 439 LNDPVDQRMRFEDQVK---EKEAG---------------DDEAH--FMDEDYLRALEYGM 478
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+S SIR+VI FP+LK
Sbjct: 479 PPAAGQGVGIDRLVMLLTDSPSIREVILFPLLK 511
>gi|269118661|ref|YP_003306838.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
gi|268612539|gb|ACZ06907.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
Length = 494
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 338/513 (65%), Gaps = 40/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
++KKVEEL++ G+EPY K+D+ + +++I + + + AGR+VA R
Sbjct: 15 KLKKVEELKALGIEPYGRKFDK---KDDIEDILKF------DETSDKTFKTAGRIVAFRR 65
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D SG IQ Y +K+ + + ++ K + +GD +G+ G++ RT+ GEL++
Sbjct: 66 MGKNGFGHIQDLSGKIQYYVKKDTVGEENYEIYKK-LGVGDFIGIEGTLFRTQTGELTLR 124
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+SF +L+K++ PLP+K+HGLTDV+ RYRQRYVD++ +V + F R KI+ IR +E
Sbjct: 125 ASSFEVLSKNIRPLPEKFHGLTDVETRYRQRYVDLVMNNDVKETFITRFKILRFIRNFLE 184
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP+L AGGA A+PF+T+HN+L D +LRIA EL+LKR+L+GGFEK++EI
Sbjct: 185 NKGFLEVETPMLHPIAGGANAKPFITHHNALDMDFFLRIAPELYLKRLLVGGFEKVFEIN 244
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG S +HNPEFT +E+Y+AY+D++ +MN+TEE+V+ + G + YQ EI
Sbjct: 245 RSFRNEGTSIKHNPEFTMLELYQAYADFEDIMNLTEELVSSLVEELFGTTKLTYQDTEID 304
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
RPW+R M + VK+ATG D + + +D + ++++ LE KDK + +
Sbjct: 305 FTRPWKRIKMKDAVKDATGFDLDSINSDEEAL--NLVKSMNIPLE-KDK-----AYTKYG 356
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
LLN +FE VE L+ PTF+ +YP EISPL+K + +RFE+FI GRE ANAFSEL
Sbjct: 357 LLNLLFEEKVEATLMNPTFITEYPKEISPLSKNKKDSVDFVDRFEMFIYGREHANAFSEL 416
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKES-DDHSYEVTLDDDFVTALEYGM 544
DP++Q+ R + AQEK+KE+ DD ++E L D++ ALEYGM
Sbjct: 417 NDPVEQKERFD-------------------AQEKMKEAGDDEAHETDL--DYIRALEYGM 455
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA G+G+GIDRL MLLT+S SIRDV+ FP LK
Sbjct: 456 PPAGGLGIGIDRLTMLLTDSFSIRDVLLFPALK 488
>gi|401680307|ref|ZP_10812227.1| lysine--tRNA ligase [Veillonella sp. ACP1]
gi|400218632|gb|EJO49507.1| lysine--tRNA ligase [Veillonella sp. ACP1]
Length = 503
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 328/513 (63%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++ + N E+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDHAKDIKNDF--------LNYEDQPVVIAGRLMTMR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L D + +K+ +DIGDI+G+ G + +T GE+++
Sbjct: 70 SHGKTAFANIRDLSGDIQVYFRKDVLGEDNYKYVKM-LDIGDIVGIEGHVFKTHSGEVTI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ +L+K+L PLP+K+HGL D + RYRQRYVD+I PEV D F KR+KIV++IR+ +
Sbjct: 129 KVDKLTLLSKALRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSKIVAKIREYM 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG E+++E+
Sbjct: 189 MNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMERVFEM 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 249 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + ++ +G
Sbjct: 309 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTNNDGIG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 359 KILNACFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFV ALEYG+
Sbjct: 419 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVNALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 459 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 491
>gi|258406354|ref|YP_003199096.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257798581|gb|ACV69518.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 504
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/512 (44%), Positives = 335/512 (65%), Gaps = 32/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R K + +GL + + + L + Y L+ + N E+ ++AGR++A R+
Sbjct: 19 RWDKAQNFAEQGLALFGNTFRKDTDIQDLIQSYESLSAEDLENVEHT-FALAGRIMAIRS 77
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK F+ ++D +G +Q++ +++ + +D + K F D+GDI+GV G++ RT EL++
Sbjct: 78 FGKATFMHIQDSTGKLQVFVQRDAVGADLYKLFKKF-DVGDIVGVRGTLFRTRTDELTLK 136
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
++TKS+ PLP+KYHGL DV+ RYRQRYVD+I P+ D+F KR +IV +R ++
Sbjct: 137 AEHVELVTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPQARDIFVKRTRIVQGLRHFLD 196
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++Q GGA ARPFVT+HN+L +LYLRIA EL+LKR+L+GG E++YEI
Sbjct: 197 NRGFMEVETPMMQHIPGGATARPFVTHHNALDMELYLRIAPELYLKRLLVGGLERVYEIN 256
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT +E Y AY+D +M++TEE+ A V G I YQG EI
Sbjct: 257 RNFRNEGISTQHNPEFTMLEFYWAYADVYDLMDLTEEMFAQLAQDVCGTTRITYQGQEIE 316
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
L W R T H ++E G++ + + + + ++ LG+ +++ +G
Sbjct: 317 LGGRWNRLTFHQALEEIGGLEPQQYQDHDQA--QALVQRLGEN--------VQTGEQLGK 366
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++F+++VEPKL+QP F+ YP +ISPL++ + + LT+RFELFICGREMANAFSEL
Sbjct: 367 TQAKLFDLLVEPKLIQPHFISHYPTDISPLSRRNEENPELTDRFELFICGREMANAFSEL 426
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP DQR R E+QV+ EKS+ DD ++ +D+D++ ALEYGMP
Sbjct: 427 NDPFDQRQRFEQQVQ-----------EKSAG-------DDEAH--AMDEDYLRALEYGMP 466
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PA+G G+GIDRLVMLLT+SASIR+VI FP+L+
Sbjct: 467 PAAGQGVGIDRLVMLLTDSASIREVILFPLLR 498
>gi|392374713|ref|YP_003206546.1| Lysyl-tRNA synthetase (LysRS) [Candidatus Methylomirabilis oxyfera]
gi|258592406|emb|CBE68715.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Candidatus
Methylomirabilis oxyfera]
Length = 500
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/515 (45%), Positives = 336/515 (65%), Gaps = 34/515 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
RI+K+ EL + G++PY +++ + A L Y L EE+++ + V++AGR+++ R
Sbjct: 11 RIRKLAELEAAGVDPYPARFEIRNLAADLHREYAVLP--EETDAAPE-VAIAGRLMSLRH 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK+ F L+D SG +Q+Y ++ L + +D K +D+GD LGV G + RT GEL+V
Sbjct: 68 HGKVTFAHLQDGSGRMQIYLSRDVLGAQLYDLCKR-LDVGDHLGVEGQLFRTRTGELTVR 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V + +L+KSL PLP+K+HGLTDV+ R+RQRY+D+I +VAD FRKR+++++EIR+ E
Sbjct: 127 VGTVRLLSKSLRPLPEKWHGLTDVETRFRQRYLDLIVNRQVADAFRKRSRLIAEIRRFFE 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
S F+EVETP++Q AGGA ARPFVT+HN+L LYLRIA EL+LKR+++GGF++++EI
Sbjct: 187 SREFLEVETPMMQSMAGGAMARPFVTHHNALDIKLYLRIAPELYLKRLVVGGFDRVFEIN 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT +E Y+AY+DY+ +M +TEE++ H A + G + YQG +I
Sbjct: 247 RNFRNEGISTQHNPEFTMLEFYQAYADYEDLMAMTEEMLAHLAKGITGDQQVTYQGQQIS 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
PW + T+ + + G++ L E +RA I G
Sbjct: 307 FAPPWPKLTLEEALVKVGGLEAEAL------TTEEGVRATA----GHHGITILPGWGKGK 356
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++ E+F+ +VE KL+QPTF++D+P E+SPLAK + +RFELFI G E+ANA+SEL
Sbjct: 357 VMAELFDTLVESKLIQPTFIIDFPTELSPLAKATQGEPTTVQRFELFIGGMEIANAYSEL 416
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP +QR R +Q+RQ ++ A H LD+DF+ ALEYGMP
Sbjct: 417 NDPREQRIRFLDQLRQRDQGDLEA----------------HG----LDEDFLRALEYGMP 456
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
P +G G+GIDRL MLLT+S SIRDVI FP+LK Q
Sbjct: 457 PTAGEGIGIDRLAMLLTDSPSIRDVILFPLLKPAQ 491
>gi|148265268|ref|YP_001231974.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|146398768|gb|ABQ27401.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/512 (45%), Positives = 321/512 (62%), Gaps = 34/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +KV+ + G+ PY + H++ L Y E + + + VAGR++ARR+
Sbjct: 13 RRRKVDTMWEAGVNPYPNDFKPQHTSADLFAAY---GGSETIDEDPPNFVVAGRIIARRS 69
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF+ L+D G QLY +K+ + + F Q + F DIGDI+G G RT+ GELS+
Sbjct: 70 FGKAAFVQLQDRKGRFQLYVKKDAIGDEVFGQFESF-DIGDIVGAVGYPFRTKTGELSLH 128
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V +LTKSLLPLP+K+HGLTDV+ RYRQRYVD+I PEV +VF KR++IV+ IR +
Sbjct: 129 VLEIRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFAKRSRIVNLIRAFMV 188
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
F+EVETP++Q GGA ARPFVT+HN+L +L+LRIA EL+LKR+++GG ++++EI
Sbjct: 189 KNDFLEVETPMMQQIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVGGLDRVFEIN 248
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y+AY+ ++ +MN TEE++ H A V G L YQG+ I
Sbjct: 249 RNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVAHDVLGTLDFSYQGMPIS 308
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+RPW+R T+ + E ID AK R + + + G
Sbjct: 309 FQRPWKRFTVKEAILEYGDID----------AKSLEDRDMAFAYAKRIGLDLPEDIGYGK 358
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L+ E+FE V E KL+QPTF+ YP E+SPL++ + + +RFE F GREMANAFSEL
Sbjct: 359 LVTEIFEEVAETKLIQPTFITAYPTEVSPLSRKNDHDPEIVDRFEFFCAGREMANAFSEL 418
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP+DQ+ R QV K K ++ Y +D+D++ ALEYG+P
Sbjct: 419 NDPVDQKERFLAQV-----------------AAKAKGDEEAHY---MDEDYIRALEYGLP 458
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P +G G+GIDRLVMLLT++ SIRDVI FP L+
Sbjct: 459 PTAGEGIGIDRLVMLLTDAPSIRDVILFPQLR 490
>gi|303228849|ref|ZP_07315662.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516469|gb|EFL58398.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 503
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 327/513 (63%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++ + N E+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDHAKDIKNDF--------LNYEDQPVVIAGRLMTMR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L D + +K+ +DIGDI+G+ G + RT GE+++
Sbjct: 70 SHGKTAFANIRDLSGDIQVYFRKDVLGEDNYKYVKM-LDIGDIVGLEGHVFRTHSGEVTI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ +L+K+L PLP+K+HGL D + RYRQRYVD+I PEV D F KR+KIV++IR+ +
Sbjct: 129 KVDKLTLLSKALRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFIKRSKIVAKIREYM 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG E+++E+
Sbjct: 189 MNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMERVFEM 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 249 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 309 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTDNDGIG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 359 KILNACFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFV ALEYG+
Sbjct: 419 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVNALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 459 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 491
>gi|110003925|emb|CAK98265.1| lysyl-trna synthetase protein [Spiroplasma citri]
Length = 500
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/524 (44%), Positives = 337/524 (64%), Gaps = 37/524 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANG-EESNSENDHV 114
+++E +R ++KK L + G P+ K+DRTH++ L E + HL+ ++S+N V
Sbjct: 7 TEQEQIRRDKLKK---LVNDGHNPFIIAKFDRTHTSKVLNEQFNHLSKEILATSSDNMTV 63
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
+AGR+ R GK +F T++D +G Q+Y + + +++ + F D+GDI+GV+G M
Sbjct: 64 KIAGRIKTFREVGKASFATVQDQNGIFQIYVRNDEVGDEKYQEFINF-DLGDIIGVTGIM 122
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
+T GEL+V V FV+L K+L LPDKY G+TD++++YR+RYVD+I+ E D+F KR+
Sbjct: 123 MKTNTGELTVRVKEFVLLAKALRALPDKYRGMTDIEEKYRRRYVDLITSTETKDIFIKRS 182
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI++ +R S G++EVETPVLQ GGA A+PFVT+HN+L D YLR+ATEL LKR++
Sbjct: 183 KIIALMRDFFNSKGYLEVETPVLQPIHGGAAAKPFVTHHNTLDMDFYLRVATELPLKRLI 242
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFE +YE+GR+FRNEG+ TRHNPEFTT+E+Y AY D MM +TE+ + + A + K
Sbjct: 243 VGGFEGVYEMGRLFRNEGMDTRHNPEFTTVEIYVAYQDMNFMMQLTEDTICYIAKNILNK 302
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
+Y GV I ++PW+R M + +KE GIDF K T A + + K
Sbjct: 303 NETEYDGVMISFQQPWKRWHMVDAIKELVGIDF---------WKPMTF-AEAKKISKEKK 352
Query: 415 FVIES-SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
IE SVG+++N FE VE KL+QPTF+ +P+E+SPLAK + T+RFELFI
Sbjct: 353 VPIEKFHTSVGHIINLFFEEFVEDKLIQPTFIYGHPVEVSPLAKTNAEDPRFTDRFELFI 412
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANA+SEL +P++Q R Q ++E+ + ++ +E LD
Sbjct: 413 KGREYANAYSELNNPVEQYDRFVSQ-----------LAERDNGNDEAQE---------LD 452
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ ALEYGMPP G+G+GIDRLVMLLT SI+DV+ FP ++
Sbjct: 453 IDFIEALEYGMPPTGGLGIGIDRLVMLLTGQDSIKDVLLFPHMR 496
>gi|431807289|ref|YP_007234187.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
P43/6/78]
gi|430780648|gb|AGA65932.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
P43/6/78]
Length = 510
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/544 (42%), Positives = 344/544 (63%), Gaps = 43/544 (7%)
Query: 40 VSAGTRNRRASSSSTSTS-DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIY 98
+S N + + +TS ++ A + R +K+ LRS G+ P+ +D T+ + + E +
Sbjct: 1 MSENQNNSENTQNEKNTSVEKNAEKENRREKLNTLRSMGINPFPNSYDVTYKSKDIAEKF 60
Query: 99 RHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ- 157
L E V+VAGR++ R GK +FLT++D GTIQ Y +K++L D+F
Sbjct: 61 EELEKNE------TEVAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKL-GDEFYNT 113
Query: 158 -LKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQR 216
K +DIGDI+GV G++ +T+ GE+++ + +LTKSL PLP+K+HGLTD + RYRQR
Sbjct: 114 VFKKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKFHGLTDTELRYRQR 173
Query: 217 YVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSL 276
YVD+I +V + F KR+K++S IR+ + F+EVETP++ GGA+A+PFVT+HN+L
Sbjct: 174 YVDLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTL 233
Query: 277 GRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSM 336
LYLRIA EL+LKR+++GGF+K++E+ R FRNEG+STRHNPEFT +E Y AY+++ +
Sbjct: 234 DMTLYLRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKV 293
Query: 337 MNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKV 396
M + EE+ + +NGK T Y+ EI + P+ R M +LVKE +G+DFN + +D
Sbjct: 294 MELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNSIQSD--- 350
Query: 397 AKETTLRALGDGLENKDKFVIESS---PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEIS 453
E +A G+E I++S P+ ++ VFE VE KL+QPTFV++YP +S
Sbjct: 351 -DEAISKAKSIGVE------IDTSKGKPTRWEVMVAVFEEKVEEKLIQPTFVINYPKAVS 403
Query: 454 PLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEK 513
PL+K + + +TER+ELFI G EM+N FSEL DP+DQ+ R EEQ+ +A A E
Sbjct: 404 PLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQL------KAKARGED 457
Query: 514 SSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAF 573
+ + +D DF+ ALEYG+PP G+G+GIDR+ +L N SIRD I F
Sbjct: 458 ET--------------MDMDLDFINALEYGLPPTGGLGIGIDRMAILFLNVPSIRDTILF 503
Query: 574 PILK 577
P ++
Sbjct: 504 PQMR 507
>gi|313894590|ref|ZP_07828153.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440780|gb|EFR59209.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 507
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 329/513 (64%), Gaps = 38/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ +A +++ + +G+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDNAKDIKDEFFLKYDGQP-------VVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L D + +K+ +DIGDI+GV G + +T GE+++
Sbjct: 71 SHGKTAFANVRDKSGDIQVYFRKDVLGEDAYKYVKM-LDIGDIIGVEGHVFKTHTGEVTI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR++IV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYM 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG ++++E+
Sbjct: 190 MRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMDRVFEM 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 250 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 310 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTENDGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 360 KILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|317472903|ref|ZP_07932209.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
gi|316899623|gb|EFV21631.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
Length = 637
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/521 (45%), Positives = 331/521 (63%), Gaps = 45/521 (8%)
Query: 60 EAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAG 118
E VR +R K+EEL+S G P+ K+D TH + ++++ + L E VSVAG
Sbjct: 10 ELVR-VRRNKLEELQSAGKNPFEIMKYDTTHHSMEIKDHFEEL--------EGKEVSVAG 60
Query: 119 RVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTE 178
R++ +R GK +F ++D G IQ Y ++ + +++ K +DIGDI+G+ G++ T+
Sbjct: 61 RMMFKRVMGKASFCNIQDLEGRIQAYVARDEIGVEEYKDFKK-MDIGDIIGIKGTVFVTK 119
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
GE S+ V+L+KSL PLP+K+HGL D D RYRQRYVD+I E D F KR+KI+S
Sbjct: 120 TGEKSIHAKEVVLLSKSLKPLPEKFHGLKDTDARYRQRYVDLIMNEESKDTFIKRSKIIS 179
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
+IR ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+LKR+++GG
Sbjct: 180 KIRSFLDGQGFMEVETPMLVPNAGGAAARPFETHYNALDEDVKLRISLELYLKRLIVGGL 239
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
EK+YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A V G TI
Sbjct: 240 EKVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYNGMMELTENLYRYLAQEVVGSTTIT 299
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
Y G+E+ L +P+ + TM + VK+ G+DF+E + + D + D+ +E
Sbjct: 300 YNGIEMDLGKPFEKITMVDAVKKYAGVDFDE------------IHTVEDARKAADEHHVE 347
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
G++LN FE VE KLVQPTFVLD+P+EISPL K + ERFE F+ G
Sbjct: 348 YEERHKKGDILNLFFEEFVEDKLVQPTFVLDHPVEISPLTKKKPENPDYVERFEFFMNGW 407
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + AQE+L D T D+DF
Sbjct: 408 EMANAYSELNDPIDQRERFK-------------------AQEELLAQGDEEANST-DEDF 447
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+VMLLT+S++IRDV+ FP +K
Sbjct: 448 LNALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLFPTMK 488
>gi|255657502|ref|ZP_05402911.1| lysyl-tRNA synthetase [Clostridium difficile QCD-23m63]
gi|296452826|ref|ZP_06894513.1| lysine--tRNA ligase [Clostridium difficile NAP08]
gi|296879922|ref|ZP_06903894.1| lysine--tRNA ligase [Clostridium difficile NAP07]
gi|296258374|gb|EFH05282.1| lysine--tRNA ligase [Clostridium difficile NAP08]
gi|296429036|gb|EFH14911.1| lysine--tRNA ligase [Clostridium difficile NAP07]
Length = 509
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 337/538 (62%), Gaps = 50/538 (9%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANG 104
N++++ + D V +R K+++L+ G +P+ ++DRTH + ++++ + L
Sbjct: 4 NQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMEIKDNFESL--- 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
E +AGR++++R GK F+ ++D G IQ Y + + +++ + DI
Sbjct: 61 -----EGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTY-DI 114
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+G+ G + +T+KGE+SV S V+L KSL LP+KYHGL D + RYRQRYVD+I P
Sbjct: 115 GDIVGIEGEIFKTKKGEISVKAKSVVLLCKSLQVLPEKYHGLKDQELRYRQRYVDLIVNP 174
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV + F R K + +R ++ GF+EVETP+L AGGA ARPF+T HN+L +YLRI
Sbjct: 175 EVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIPMYLRI 234
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A EL+LKR+++GGF+K+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY MM ITE ++
Sbjct: 235 ANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAYADYTDMMEITENVI 294
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
H A G + ++YQG EI PW+R +M + VKE +G+DF+ + D L+VA+E
Sbjct: 295 AHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEYSGVDFSTINTDEEALEVAREKG 354
Query: 402 LRALGDGLENKDKFVIESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
IE P + G ++N FE E KL+QPTF+ +P+E+SPL+K +
Sbjct: 355 ---------------IEIKPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRN 399
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
T+RFE+F E+ANAFSEL DP+DQ+ R +Q+R K
Sbjct: 400 AEDPRRTDRFEVFANKWELANAFSELNDPIDQKGRFIDQLR------------------K 441
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ DD ++E +D+DF+ ALE G+PP G+G+GIDR++MLLTNS SIRDV+ FP +K
Sbjct: 442 RELGDDEAFE--MDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMK 497
>gi|404475927|ref|YP_006707358.1| lysyl-tRNA synthetase [Brachyspira pilosicoli B2904]
gi|404437416|gb|AFR70610.1| lysyl-tRNA synthetase [Brachyspira pilosicoli B2904]
Length = 510
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/539 (42%), Positives = 343/539 (63%), Gaps = 41/539 (7%)
Query: 41 SAGTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRH 100
S T+N + SS ++ A + R +K+ LR+ G+ P+ +D T+ + + E +
Sbjct: 8 SENTQNEKNSSV-----EKNAEKENRKEKLNTLRNMGINPFPNSYDVTYKSKDIAEQFEE 62
Query: 101 LANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ--L 158
L E V+VAGR++ R GK +FLT++D GTIQ Y +K++L D+F
Sbjct: 63 LEKNE------TEVAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKL-GDEFYNTVF 115
Query: 159 KVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYV 218
K +DIGDI+GV G++ +T+ GE+++ + +LTKSL PLP+K+HGLTD + RYRQRYV
Sbjct: 116 KKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKFHGLTDTELRYRQRYV 175
Query: 219 DMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGR 278
D+I +V + F KR+K++S IR+ + F+EVETP++ GGA+A+PFVT+HN+L
Sbjct: 176 DLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDM 235
Query: 279 DLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMN 338
LYLRIA EL+LKR+++GGF+K++E+ R FRNEG+STRHNPEFT +E Y AY+++ +M
Sbjct: 236 TLYLRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVME 295
Query: 339 ITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAK 398
+ EE+ + +NGK T Y+ EI + P+ R M +LVKE +G+DFN + +D +
Sbjct: 296 LVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNSIQSDDEAIS 355
Query: 399 ETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKP 458
+T +++G ++ + P+ ++ VFE VE KL+QPTFV++YP +SPL+K
Sbjct: 356 KT--KSIGVEIDTS-----KGKPTKWEVMVAVFEEKVEEKLIQPTFVINYPKAVSPLSKS 408
Query: 459 HRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQE 518
+ + +TER+ELFI G EM+N FSEL DP+DQ+ R EEQ+ +A A E +
Sbjct: 409 YPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQL------KAKARGEDET--- 459
Query: 519 KLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +D DF+ ALEYG+PP G+G+GIDR+ +L N SIRD I FP ++
Sbjct: 460 -----------MDMDLDFINALEYGLPPTGGLGIGIDRMAILFLNVPSIRDTILFPQMR 507
>gi|290969241|ref|ZP_06560766.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290780747|gb|EFD93350.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 510
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/530 (45%), Positives = 334/530 (63%), Gaps = 42/530 (7%)
Query: 52 SSTSTSDREAVR---ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESN 108
+ T+ +D E + +R +K+E+ + G+ P+ K++ H A +++
Sbjct: 7 TDTTAADIEKLNDQMHVRREKMEQFAAAGVYPFGEKYEWDHHAADVKQ------AATTLE 60
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V +AGR++A R GK AF LRD SG IQ+Y K+ L D + K+ +DIGDI+
Sbjct: 61 TAATVVRLAGRLMAIRRHGKTAFCVLRDISGEIQVYFRKDLLGEDSYTLFKL-LDIGDII 119
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV G++ T GE ++ V+ + +LTK+L PLP+K+HGLTD + RYRQRY+D+I PEV D
Sbjct: 120 GVEGTVFTTHTGETTIRVSDWKLLTKALRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKD 179
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI+ IR+ ++ GF+EVETP+L AGGA ARPF TYH++L D+YLRIA EL
Sbjct: 180 TFIKRSKIIKGIRRYLDERGFLEVETPMLHTIAGGAAARPFKTYHHALDMDMYLRIAPEL 239
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
HLKR+L+GG E++YE+ R FRNEG+ TRHNPEFTT+E+Y+A+ D + ++ ITE+IV A
Sbjct: 240 HLKRLLVGGLERVYEMNRCFRNEGIDTRHNPEFTTVELYQAFGDLEDVIAITEDIVATLA 299
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
+ G I Y EI L PW+R TM V E TG DF + DL A+ A+ D
Sbjct: 300 KQLYGTTKITYLDTEIDLTPPWKRMTMIEAVAEFTGKDFTGV-TDLAAAQ-----AIADE 353
Query: 409 LE-NKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
L+ KF +G ++N FE VE KL+QPT + +P+EISPL K R + LT
Sbjct: 354 LQVPYGKF-----DGIGKIINACFEEYVEEKLIQPTIITGHPLEISPLTKQQRENPLLTY 408
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE FI GRE+AN FSEL DPLDQR R Q+ E+ + DD +
Sbjct: 409 RFEAFIYGRELANGFSELNDPLDQRRRFTAQM------------------EERERGDDEA 450
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ +D+D+ ALEYG+PP G+G+GIDRLVM LT+SASIRDV+ FP +K
Sbjct: 451 HQ--MDEDYCRALEYGLPPTGGLGIGIDRLVMFLTDSASIRDVLLFPTMK 498
>gi|120601936|ref|YP_966336.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|120562165|gb|ABM27909.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 501
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K EL G+ Y + + H + Y L + +E + + ++AGR+V+ R+
Sbjct: 18 RVVKTCELLDAGVSAYPNGFIKQHDIAPVLAEYEGL-DADELETVDAAFTMAGRIVSHRS 76
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+AF + D +G +Q Y +E L + + K +DIGDI+GVSG + RT+ GEL++
Sbjct: 77 FGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKK-LDIGDIVGVSGRLFRTKTGELTLS 135
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+LTKS+ PLP+KYHGL DV+ RYRQRYVD+I P D+FRKR IV E R+ +E
Sbjct: 136 CTEVRLLTKSIRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLE 195
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++Q GGA A+PFVT+HN+L LY+RIA EL+LKR+L+GGFEK++EI
Sbjct: 196 ARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLYMRIAPELYLKRLLVGGFEKVFEIN 255
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT E Y AY+ ++ +M++TEE+ +H A V G I YQG E+
Sbjct: 256 RNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVD 315
Query: 366 L-ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R T H + E G E ND + + +R G+ + +K +G
Sbjct: 316 LTPGKWVRLTFHESL-EKVGGHSPEFYNDYEKVR-AYVRERGEKVLQGEK--------LG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F++ VEP+L+QPTF+ YP +ISPL++ + ++ +T+RFELFI GRE+ANAFSE
Sbjct: 366 KLQAKLFDLDVEPRLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QV+ EK A DD ++ +D+D++ ALEYGM
Sbjct: 426 LNDPVDQRMRFEDQVK---EKEAG---------------DDEAH--FMDEDYLRALEYGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+S SIR+VI FP+LK
Sbjct: 466 PPAAGQGVGIDRLVMLLTDSPSIREVILFPLLK 498
>gi|365852737|ref|ZP_09393094.1| lysine--tRNA ligase [Lactobacillus parafarraginis F0439]
gi|363714313|gb|EHL97846.1| lysine--tRNA ligase [Lactobacillus parafarraginis F0439]
Length = 501
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 327/513 (63%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ ELR +G++P+ +++ R+H A QL + + + + + V++AGR++A+R
Sbjct: 13 VRRQKMNELREEGIDPFGHRFVRSHLAAQLHREFDDIDKDDLMDMDKK-VTIAGRMMAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D +G IQ+Y K+ + D + K DIGD LG+ G + +T+ GEL+V
Sbjct: 72 GKGKVGFADLQDRTGKIQIYVRKDIVGDDVYHIFKR-SDIGDHLGIKGQIIKTDMGELTV 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDK+HGL D ++ YRQRY+D+IS PE + F KR+ I++ IR +
Sbjct: 131 RAESVTFLSKALRPLPDKWHGLQDKEQVYRQRYLDLISNPESFERFHKRSHIITAIRSYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+S ++EVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ TRHNPEFT +E Y AY D+ +M+ TE I A AV I YQG I
Sbjct: 251 GRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKAVTDDNIITYQGHTI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L + ++R+ M + +KE TGIDF + +D K L ++ E G
Sbjct: 311 DLSKEFKRQHMVDAIKEYTGIDFWKPMSDEDAKK----------LADEHHIHYEKWWKTG 360
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE +V+PKL QPTF+ +P+EISPLAK + T+RFEL+I E ANAF+E
Sbjct: 361 HIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNADDPRFTDRFELYILTNEFANAFTE 420
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E QV++ E A +D+D+V ALEYGM
Sbjct: 421 LNDPIDQRQRFEAQVKERQEGNDEAEG--------------------IDEDYVEALEYGM 460
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493
>gi|46450201|gb|AAS96849.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
Length = 501
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 334/513 (65%), Gaps = 33/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K EL G+ Y + + H + Y L + +E + + ++AGR+V+ R+
Sbjct: 18 RVVKTCELLDAGVSAYPNGFIKKHDIAPVLAEYEGL-DADELETVDAAFTMAGRIVSHRS 76
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+AF + D +G +Q Y +E L + + K +DIGDI+GVSG + RT+ GEL++
Sbjct: 77 FGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKK-LDIGDIVGVSGRLFRTKTGELTLS 135
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+LTKS+ PLP+KYHGL DV+ RYRQRYVD+I P D+FRKR IV E R+ +E
Sbjct: 136 CTEVRLLTKSIRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLE 195
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ GF+EVETP++Q GGA A+PFVT+HN+L LY+RIA EL+LKR+L+GGFEK++EI
Sbjct: 196 ARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLYMRIAPELYLKRLLVGGFEKVFEIN 255
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT E Y AY+ ++ +M++TEE+ +H A V G I YQG E+
Sbjct: 256 RNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVD 315
Query: 366 L-ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R T H + E G E ND + + +R G+ + +K +G
Sbjct: 316 LTPGKWVRLTFHESL-EKVGGHSPEFYNDYEKVR-AYVRERGEKVLQGEK--------LG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F++ VEP+L+QPTF+ YP +ISPL++ + ++ +T+RFELFI GRE+ANAFSE
Sbjct: 366 KLQAKLFDLDVEPRLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E+QV+ EK A DD ++ +D+D++ ALEYGM
Sbjct: 426 LNDPVDQRMRFEDQVK---EKEAG---------------DDEAH--FMDEDYLRALEYGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+S SIR+VI FP+LK
Sbjct: 466 PPAAGQGVGIDRLVMLLTDSPSIREVILFPLLK 498
>gi|300871937|ref|YP_003786810.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
95/1000]
gi|300689638|gb|ADK32309.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
95/1000]
Length = 510
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/542 (42%), Positives = 343/542 (63%), Gaps = 47/542 (8%)
Query: 41 SAGTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRH 100
S T+N + SS ++ A + R +K+ LR+ G+ P+ +D T+ + + E +
Sbjct: 8 SENTQNEKNSSV-----EKNAEKENRKEKLNTLRNMGINPFPNSYDVTYKSKDIAEQFEE 62
Query: 101 LANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ--L 158
L E V+VAGR++ R GK +FLT++D GTIQ Y +K++L D+F
Sbjct: 63 LEKNE------TEVAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKL-GDEFYNTVF 115
Query: 159 KVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYV 218
K +DIGDI+GV G++ +T+ GE+++ + +LTKSL PLP+K+HGLTD + RYRQRYV
Sbjct: 116 KKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKFHGLTDTELRYRQRYV 175
Query: 219 DMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGR 278
D+I +V + F KR+K++S IR+ + F+EVETP++ GGA+A+PFVT+HN+L
Sbjct: 176 DLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDM 235
Query: 279 DLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMN 338
LYLRIA EL+LKR+++GGF+K++E+ R FRNEG+STRHNPEFT +E Y AY+++ +M
Sbjct: 236 TLYLRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVME 295
Query: 339 ITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAK 398
+ EE+ + +NGK T Y+ EI + P+ R M +LVKE +G+DFN + +D
Sbjct: 296 LVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNSIQSD----D 351
Query: 399 ETTLRALGDGLENKDKFVIESS---PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPL 455
E +A G+E I++S P+ ++ VFE VE KL+QPTFV++YP +SPL
Sbjct: 352 EAISKAKSIGVE------IDTSKGKPTKWEVMVAVFEEKVEEKLIQPTFVINYPKAVSPL 405
Query: 456 AKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSS 515
+K + + +TER+ELFI G EM+N FSEL DP+DQ+ R EEQ+ +A A E +
Sbjct: 406 SKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQL------KAKARGEDET 459
Query: 516 AQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPI 575
+ +D DF+ ALEYG+PP G+G+GIDR+ +L N SIRD I FP
Sbjct: 460 --------------MDMDLDFINALEYGLPPTGGLGIGIDRMAILFLNVPSIRDTILFPQ 505
Query: 576 LK 577
++
Sbjct: 506 MR 507
>gi|348025379|ref|YP_004765183.1| lysyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341821432|emb|CCC72356.1| lysyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 503
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/518 (45%), Positives = 330/518 (63%), Gaps = 41/518 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++E G+ P+ K++ H A ++++ L E VSVAGR++A R
Sbjct: 23 VRREKMQEFIDAGVYPFGQKYNWDHHAQEVKDDAAELEKNETV------VSVAGRLMAIR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK AF LRD SG IQLY K+ L + + K+ +DIGDI+G+ G++ T GE ++
Sbjct: 77 RHGKTAFCVLRDLSGEIQLYFRKDVLGEESYTLFKL-LDIGDIVGIEGTVFVTHTGETTI 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V + +L+KSL PLP+K+HGLTD + RYRQRY+D+I PEV D F KR+KI+ IRK +
Sbjct: 136 RVEKWTLLSKSLRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKDTFIKRSKIIKGIRKYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETP+L AGGA ARPF T+HN+L D+YLRIA ELHLKR+L+GG E++YE+
Sbjct: 196 DDRHFLEVETPMLHTIAGGAAARPFKTHHNALDMDIYLRIAPELHLKRLLVGGLERVYEM 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ TRHNPEFTT+E+Y+AY D + ++NITE++V+ A + G + + Y EI
Sbjct: 256 NRCFRNEGIDTRHNPEFTTVELYQAYGDLEDVINITEDMVSKLAEMLYGTMKLTYIDKEI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP--S 422
L PW R TM VK+ +G DF + D++ A++ D+ +E
Sbjct: 316 DLTPPWDRMTMIEAVKKFSGADFEGI-TDVETARKMA-----------DEHDVEYGQFDG 363
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
VG ++N FE VE L+QPT + +P+EISPL K R + LT RFE FI GRE+AN F
Sbjct: 364 VGKIINAFFEKFVEENLIQPTIITGHPLEISPLTKQDRDNPLLTYRFEAFIYGRELANGF 423
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQR R EQ+++ + DD +++ +D+D+ ALEY
Sbjct: 424 SELNDPIDQRNRFIEQMKER------------------ERGDDEAHQ--MDEDYCRALEY 463
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
G+PP G+G+GIDRLVM LTNS SIRDV+ FP+ + +Q
Sbjct: 464 GLPPTGGLGIGIDRLVMFLTNSPSIRDVLLFPLSRPEQ 501
>gi|227873284|ref|ZP_03991549.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
gi|227840851|gb|EEJ51216.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
Length = 651
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/521 (45%), Positives = 331/521 (63%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D + R K+ E ++ +P+ K ++TH + +++E ++ L EN V +
Sbjct: 14 DMNHILKARYDKLAEYQAAKEDPFEITKAEQTHHSTEIKENFKSL--------ENQQVVI 65
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F+ L+D G IQ+Y +E L +++ + K +D+GDI+ V G +
Sbjct: 66 AGRILSKRVMGKASFMHLQDRDGRIQVYVSRESLGEEEYKKFKK-LDLGDIVEVRGYVFE 124
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+SV +L+KSL PLP+K+HGLTD D RYRQRYVD+I + VF KR++I
Sbjct: 125 TQMGEISVHGEKITLLSKSLYPLPEKFHGLTDTDTRYRQRYVDLIMNEDSRTVFMKRSQI 184
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+ EIR + F+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+LKR++IG
Sbjct: 185 LREIRNFLAGRDFLEVETPMLVENAGGAAARPFETHYNALNEDVKLRISLELYLKRLIIG 244
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY+ MM +TE + + A V G L
Sbjct: 245 GMERVYEIGRVFRNEGIDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGTLH 304
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I YQG I LE P+RR TM +KE GIDF++ +K +E RAL + +
Sbjct: 305 ISYQGTPIDLESPFRRLTMTEAIKEYAGIDFDQ----IKTLEEA--RALA----KEKEIA 354
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E +G++ N FE E KLVQPTF++D+P+EISPL K ERFELFI GR
Sbjct: 355 YEEHHGIGDIENLFFEEYCEEKLVQPTFIMDHPVEISPLTKKKPSDPSKVERFELFIYGR 414
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + AQ+ L ++ D T D+DF
Sbjct: 415 EMANAYSELNDPIDQRERFK-------------------AQDALADAGDEEANHT-DEDF 454
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ A+E GMPP G+G GIDRLVMLLT++ASIRDV+ FP +K
Sbjct: 455 LHAMEIGMPPTGGIGYGIDRLVMLLTDAASIRDVLLFPTMK 495
>gi|266624958|ref|ZP_06117893.1| lysine--tRNA ligase, partial [Clostridium hathewayi DSM 13479]
gi|288863147|gb|EFC95445.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
Length = 597
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/531 (44%), Positives = 333/531 (62%), Gaps = 40/531 (7%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEE 106
+ + + D + +R K+ EL+ G +P+ K+D T ++ ++E Y
Sbjct: 4 QQNQNQVKEEDLNQLLKVRRDKLAELQEAGKDPFKITKYDVTVHSSDIKEHYEEW----- 58
Query: 107 SNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGD 166
E VSVAGR++++R GK +F ++D G IQ Y ++ + + + K +DIGD
Sbjct: 59 ---EGKEVSVAGRMMSKRVMGKASFCNVQDLKGNIQTYVARDSIGEESYKDFKK-LDIGD 114
Query: 167 ILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEV 226
I+G+ G+ T+ GE+S+ S V+LTKSL LP+K+HGLT+ D RYRQRYVD++ PEV
Sbjct: 115 IVGIKGTAFTTKTGEISIHATSVVLLTKSLQILPEKFHGLTNTDLRYRQRYVDLVMNPEV 174
Query: 227 ADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 286
D F KR++I+ IR ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+
Sbjct: 175 RDTFVKRSQIIKAIRDHLDDQGFMEVETPMLVANAGGAAARPFETHYNALDEDVKLRISL 234
Query: 287 ELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTH 346
EL+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++ E++
Sbjct: 235 ELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLVEDLFRS 294
Query: 347 CALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALG 406
AL V G + Y GVEI L +P+ R TM + +K+ GIDF E+ D + +AL
Sbjct: 295 VALKVLGTAVVTYDGVEIDLSKPFERITMVDALKKYKGIDFTEIHTDEEA------KALA 348
Query: 407 DGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLT 466
D + E+ G++L+ +FE VE LVQPTF++D+P+EISPL K T
Sbjct: 349 DQYHIQ----YEARHKKGDILSMLFEEFVEEHLVQPTFIMDHPVEISPLTKRKPDDPDYT 404
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
ERFELFI REMANA+SEL DP+DQR R E AQE LK + D
Sbjct: 405 ERFELFITKREMANAYSELNDPIDQRVRFE-------------------AQEVLKAAGDE 445
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++D+DF+ AL GMPP G+G+GIDR VMLLT+S +IRDV+ FP +K
Sbjct: 446 EAN-SMDEDFLNALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLFPTMK 495
>gi|403389168|ref|ZP_10931225.1| lysyl-tRNA ligase [Clostridium sp. JC122]
Length = 507
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/521 (44%), Positives = 331/521 (63%), Gaps = 43/521 (8%)
Query: 64 ALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
+R +K+ EL+ +G +P+ YK +RTH++ +++E + L + + V++AGR+++
Sbjct: 26 TIRRQKLAELQEQGKDPFDVYKVNRTHNSQEVKEQFEELGD--------NLVTIAGRLMS 77
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
+R GK F + D G IQ+Y + + + F K F DIGD + V+G+ T GE
Sbjct: 78 KRIQGKAGFCDVHDRDGKIQIYVRLDAVGEESFKDAKTF-DIGDFVTVTGTAFVTRTGET 136
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
S+ +++KSL PLP+K+HGL + D +YRQR VD++ +V D F KR I+ IR+
Sbjct: 137 SIRAKEIKLISKSLKPLPEKWHGLKNPDLKYRQREVDLVMNKDVRDTFMKRINIIKAIRE 196
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+++ G++EVETP+L AGGA ARPFVT+HN+L D+YLRIATEL+LKR ++GGFEK+Y
Sbjct: 197 FLDNRGYLEVETPILSPIAGGAAARPFVTHHNTLDIDMYLRIATELYLKRCIVGGFEKVY 256
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
++G+ FRNEG+S RHNPEFT IE+YEAY+DY MM +TE++V + V+G + YQG
Sbjct: 257 DMGKNFRNEGMSVRHNPEFTMIELYEAYADYNDMMEMTEQLVAYACEKVHGTTKVTYQGT 316
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIES 419
EI PWRR TM + VKE GIDFNE+ + K+AKE L + + DK
Sbjct: 317 EIDFTPPWRRITMVDAVKEYAGIDFNEIKTNEEAQKIAKEKHL----EFPKPIDKV---- 368
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
+ G +LN +FE E L+QPTF+ DYP+EISPL K R + TERFE F+ GRE+
Sbjct: 369 --TKGEVLNMLFEEYGEEHLIQPTFLCDYPVEISPLTKKKRGNEEFTERFEGFVYGREVC 426
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NA+SEL DP+ QR R +Q NE+ DD +Y +D++F+ A
Sbjct: 427 NAYSELNDPIVQRDRFAQQA---NERELG---------------DDEAY--VIDEEFMNA 466
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
LE GMPP G+G+GIDR+VM LT+S SIRDVI FP +K Q
Sbjct: 467 LEIGMPPTGGLGIGIDRIVMFLTDSTSIRDVILFPTMKPLQ 507
>gi|303328113|ref|ZP_07358552.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|302861939|gb|EFL84874.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
Length = 527
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/546 (43%), Positives = 346/546 (63%), Gaps = 39/546 (7%)
Query: 39 TVSAGTRNRRAS------SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSAN 92
V GT++ A+ S + D V R+ K +L G+ + + + H+ +
Sbjct: 11 VVKLGTKSSHAAYFMPMLESFAARDDLNEVIKNRVSKACDLLDAGVPLFPNDFHKDHAVS 70
Query: 93 QLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS 152
+QE + L G++ + D ++AGR+V+ R+FGK+AF L D SG IQ Y +E L
Sbjct: 71 WVQEKFGGL-EGDDLEKQEDVFAIAGRIVSLRSFGKVAFFHLMDQSGRIQCYASREHLDE 129
Query: 153 DQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKR 212
+ + +K +D+GDI+GVSG + RT+ GEL++ S ++T+S+ PLP+KYHGL D++ R
Sbjct: 130 ETYKIVKK-LDVGDIVGVSGHLFRTKTGELTIACRSLKLITRSMRPLPEKYHGLKDMETR 188
Query: 213 YRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTY 272
YRQRYVD+I P ++F KR+ IV E R+ +E GF+EVETP++Q AGGA A+PF T+
Sbjct: 189 YRQRYVDLIVTPRAREIFAKRSLIVREFRRFMEEHGFMEVETPIMQPLAGGATAKPFKTH 248
Query: 273 HNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSD 332
HN+L DL+LRIA EL+LKR+L+GGFEK++E+ R FRNEG+ TRHNPEFT E Y AY+
Sbjct: 249 HNALDLDLFLRIAPELYLKRLLVGGFEKVFELNRSFRNEGIDTRHNPEFTMCEFYWAYAT 308
Query: 333 YQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERP-WRRETMHNLVKEATGIDFNELG 391
++ +MN TE++ H A+A G + YQG EI L W+R + ++ + E G +
Sbjct: 309 FEDLMNFTEKLFAHLAMAACGTTVVTYQGQEIDLTPGHWKRLSFYDSLTEIGGHS-PDFY 367
Query: 392 NDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIE 451
ND + +R G+ + S S+ L ++F++ VE KL+QP F+ YP E
Sbjct: 368 NDYSKVR-NYIRERGEKAAD--------SESLQKLQAKLFDLDVEGKLIQPHFIYHYPTE 418
Query: 452 ISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVS 511
ISPL++ + +T+RFELFI GRE++NAFSEL DP+DQR R EEQVR+
Sbjct: 419 ISPLSRRNDLRPEITDRFELFITGRELSNAFSELNDPVDQRLRFEEQVRER--------- 469
Query: 512 EKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVI 571
+ DD ++ ++D+D++ ALEYGMPPA+G G+GIDRLVMLLT+SASIR+VI
Sbjct: 470 ---------EAGDDEAH--SMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVI 518
Query: 572 AFPILK 577
FP+L+
Sbjct: 519 LFPLLR 524
>gi|429760343|ref|ZP_19292823.1| lysine--tRNA ligase [Veillonella atypica KON]
gi|429177677|gb|EKY18985.1| lysine--tRNA ligase [Veillonella atypica KON]
Length = 503
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 328/513 (63%), Gaps = 39/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++ + N E+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDHAKDIKNDF--------LNYEDQPVVIAGRLMTMR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L D + +K+ +DIGDI+G+ G + +T GE+++
Sbjct: 70 SHGKTAFANIRDLSGDIQVYFRKDVLGEDNYKYVKM-LDIGDIVGLEGHVFKTHSGEVTI 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V+ +L+K+L PLP+K+HGL D + RYRQRYVD+I PEV D F KR+KIV++IR+ +
Sbjct: 129 KVDKLTLLSKALRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSKIVAKIREYM 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG E+++E+
Sbjct: 189 MNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMERVFEM 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 249 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + ++ +G
Sbjct: 309 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTNNDGIG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 359 KILNACFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFV ALEYG+
Sbjct: 419 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVNALEYGL 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 459 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 491
>gi|347359867|ref|YP_387861.2| lysyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|342906402|gb|ABB38166.2| Lysyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 527
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/515 (45%), Positives = 336/515 (65%), Gaps = 33/515 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K ++ G+ + ++++ ++Q Y L EE + + S AGR+V++R+
Sbjct: 44 RVAKSCDMMDAGVPLFPNRFNKEIDVAEIQAGYEGL-EAEELETLDQEFSCAGRIVSQRS 102
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+ F L D SG +Q Y ++ L +D + K F DIGDI+GV G++ RT+ GEL++
Sbjct: 103 FGKVTFFHLLDKSGKMQCYASRDSLGADAYSVFKKF-DIGDIVGVCGTLFRTKTGELTIQ 161
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+S +LTKS+ PLP+KYHGL DV+ RYRQRYVD+I P ++FRKR +IV E R +E
Sbjct: 162 CSSVQLLTKSIRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRGQIVREFRNFME 221
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP++Q GGA A+PFVT+HN+L LY+RIA EL+LKR+L+GGFEK++EI
Sbjct: 222 ERGFMEVETPMMQPIPGGATAKPFVTHHNALDMQLYMRIAPELYLKRLLVGGFEKVFEIN 281
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ST+HNPEFT E Y AY+ ++ +M++TE++ + A V G I YQG E+
Sbjct: 282 RNFRNEGISTQHNPEFTMCEFYWAYARFEDLMDLTEQLFSRLAQKVCGSTVITYQGQEVD 341
Query: 366 L-ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W+R T H+ + E G E ND + L + + + VIE +G
Sbjct: 342 LTPGKWQRMTFHDSL-EKVGGHAPEFYNDYE--------KLSAYIRERGEKVIEGE-KLG 391
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F++ VE KL+QP F+ YP +ISPL++ + + +T+RFELFI GRE+ANAFSE
Sbjct: 392 KLQAKLFDLDVEYKLIQPHFIYHYPTDISPLSRRNDDNPDVTDRFELFITGRELANAFSE 451
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R ++QV EK A DD ++ +D+D++ ALEYGM
Sbjct: 452 LNDPVDQRKRFDDQV---AEKEAG---------------DDEAH--FMDEDYLRALEYGM 491
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
PPA+G G+GIDRLVMLLT+SASIR+VI FP+LK++
Sbjct: 492 PPAAGQGVGIDRLVMLLTDSASIREVILFPLLKLE 526
>gi|345891260|ref|ZP_08842110.1| lysyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
gi|345048402|gb|EGW52237.1| lysyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
Length = 547
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/546 (43%), Positives = 346/546 (63%), Gaps = 39/546 (7%)
Query: 39 TVSAGTRNRRAS------SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSAN 92
V GT++ A+ S + D V R+ K +L G+ + + + H+ +
Sbjct: 31 VVKLGTKSSHAAYFMPMLESFAARDDLNEVIKNRVSKACDLLDAGVPLFPNDFHKDHAVS 90
Query: 93 QLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLS 152
+QE + L G++ + D ++AGR+V+ R+FGK+AF L D SG IQ Y +E L
Sbjct: 91 WVQEKFGGL-EGDDLEKQEDVFAIAGRIVSLRSFGKVAFFHLMDQSGRIQCYASREHLDE 149
Query: 153 DQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKR 212
+ + +K +D+GDI+GVSG + RT+ GEL++ S ++T+S+ PLP+KYHGL D++ R
Sbjct: 150 ETYKIVKK-LDVGDIVGVSGHLFRTKTGELTIACRSLKLITRSMRPLPEKYHGLKDMETR 208
Query: 213 YRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTY 272
YRQRYVD+I P ++F KR+ IV E R+ +E GF+EVETP++Q AGGA A+PF T+
Sbjct: 209 YRQRYVDLIVTPRAREIFAKRSLIVREFRRFMEEHGFMEVETPIMQPLAGGATAKPFKTH 268
Query: 273 HNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSD 332
HN+L DL+LRIA EL+LKR+L+GGFEK++E+ R FRNEG+ TRHNPEFT E Y AY+
Sbjct: 269 HNALDLDLFLRIAPELYLKRLLVGGFEKVFELNRSFRNEGIDTRHNPEFTMCEFYWAYAT 328
Query: 333 YQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERP-WRRETMHNLVKEATGIDFNELG 391
++ +MN TE++ H A+A G + YQG EI L W+R + ++ + E G +
Sbjct: 329 FEDLMNFTEKLFAHLAMAACGTTVVTYQGQEIDLTPGHWKRLSFYDSLTEIGGHS-PDFY 387
Query: 392 NDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIE 451
ND + +R G+ + S S+ L ++F++ VE KL+QP F+ YP E
Sbjct: 388 NDYSKVR-NYIRERGEKAAD--------SESLQKLQAKLFDLDVEGKLIQPHFIYHYPTE 438
Query: 452 ISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVS 511
ISPL++ + +T+RFELFI GRE++NAFSEL DP+DQR R EEQVR+
Sbjct: 439 ISPLSRRNDLRPEITDRFELFITGRELSNAFSELNDPVDQRLRFEEQVRER--------- 489
Query: 512 EKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVI 571
+ DD ++ ++D+D++ ALEYGMPPA+G G+GIDRLVMLLT+SASIR+VI
Sbjct: 490 ---------EAGDDEAH--SMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVI 538
Query: 572 AFPILK 577
FP+L+
Sbjct: 539 LFPLLR 544
>gi|373470889|ref|ZP_09561976.1| lysine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371761511|gb|EHO50129.1| lysine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 646
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/529 (44%), Positives = 339/529 (64%), Gaps = 40/529 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESN 108
S+ ++ D + R K+ EL++ +P+ K+D + +++ + L
Sbjct: 4 SNEPMASEDLNHILKARRDKLSELQAANNDPFFITKYDVDKHSADIKDDFDEL------- 56
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V +AGR++++R GK +F ++D +G IQ Y ++ + D++ K +DIGDI+
Sbjct: 57 -DGKSVKIAGRLMSKRVMGKASFCHVQDLTGRIQAYVARDSVGEDEYKAFKK-LDIGDIV 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV+G++ +T+ GE+S+ V+L+KSL PLP+K+HGLTD D RYRQRYVD+I +V D
Sbjct: 115 GVTGTVFKTQTGEISLHATDVVLLSKSLKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKD 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI++EIRK ++ GF+EVETP+L AGGA ARPF T+ N+L D+ LRI+ EL
Sbjct: 175 TFIKRSKIITEIRKFLDGQGFMEVETPMLVSNAGGAAARPFNTHFNALNEDVKLRISLEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + + A
Sbjct: 235 YLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRYLA 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y I L +P+ R TM +K+ +GIDF++ ++ +E A G
Sbjct: 295 EQVCGTTTIPYAEAMIDLGKPFERITMVEAIKKYSGIDFDQ----IETTEEAKALAKEKG 350
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E E S G+++N FE VE KL+QPTFV+D+PIE+SPL K ER
Sbjct: 351 IE------FEERHSRGDIINLFFEEFVEEKLIQPTFVMDHPIEVSPLTKKKPSDPRYVER 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANA+SEL DP+DQR R + Q E+ AA E++ +H+
Sbjct: 405 FELFIYGREMANAYSELNDPIDQRERFQAQ-----EEAFAAGDEEA----------NHT- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 449 ----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 493
>gi|322391976|ref|ZP_08065440.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
gi|321145202|gb|EFX40599.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
Length = 496
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/515 (44%), Positives = 333/515 (64%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 IRREKMAALREQGIDPFGTRFERTANSQELKDKFADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-SDLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +M++TE I+ H A AV G + YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHVAKAVKGDGPVIYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
L P++R M + +KE TG+DF K+ T + ++ K +E
Sbjct: 313 KLNEPFKRVHMVDAIKEITGVDF---------WKDMTFEE-AKAIASEKKVPVEKHFTEF 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NAF+
Sbjct: 363 GHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D D++ ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|434382190|ref|YP_006703973.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli WesB]
gi|404430839|emb|CCG56885.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli WesB]
Length = 510
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/540 (42%), Positives = 341/540 (63%), Gaps = 43/540 (7%)
Query: 41 SAGTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRH 100
S T+N + SS ++ + R +K+ LR+ G+ P+ +D T+ + + E +
Sbjct: 8 SENTQNEKNSSV-----EKNVEKENRKEKLNTLRNLGINPFPNSYDVTYKSKDIAEQFEE 62
Query: 101 LANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ--L 158
L E V+VAGR++ R GK +FLT++D GTIQ Y +K++L D+F
Sbjct: 63 LEKNE------TEVAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKL-GDEFYNTVF 115
Query: 159 KVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYV 218
K +DIGDI+GV G++ +T+ GE+++ + +LTKSL PLP+K+HGLTD + RYRQRYV
Sbjct: 116 KKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKFHGLTDTELRYRQRYV 175
Query: 219 DMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGR 278
D+I +V + F KR+K++S IR+ + F+EVETP++ GGA+A+PFVT+HN+L
Sbjct: 176 DLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDM 235
Query: 279 DLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMN 338
LYLRIA EL+LKR+++GGF+K++E+ R FRNEG+STRHNPEFT +E Y AY+++ +M
Sbjct: 236 TLYLRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVME 295
Query: 339 ITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNEL-GNDLKVA 397
+ EE+ + +NGK T Y+ EI + P+ R M +LVKE +G+DFN + +D ++
Sbjct: 296 LVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNSIQSDDEAIS 355
Query: 398 KETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAK 457
K ++ D +NK P+ ++ VFE VE KL+QPTFV++YP +SPL+K
Sbjct: 356 KAKSIGVEIDTSKNK--------PTKWEVMVAVFEEKVEEKLIQPTFVINYPKAVSPLSK 407
Query: 458 PHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQ 517
+ + +TER+ELFI G EM+N FSEL DP+DQ+ R EEQ+ +A A E +
Sbjct: 408 SYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQL------KAKARGEDET-- 459
Query: 518 EKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ +D DF+ ALEYG+PP G+G+GIDR+ +L N SIRD I FP ++
Sbjct: 460 ------------MDMDLDFINALEYGLPPTGGLGIGIDRMAILFLNVPSIRDTILFPQMR 507
>gi|313884406|ref|ZP_07818167.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620190|gb|EFR31618.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
Length = 504
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/512 (44%), Positives = 324/512 (63%), Gaps = 30/512 (5%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R K E ++ +P+ + R+H + +L Y N V++AGR+V++R
Sbjct: 21 REKMAELFAAEDAKPFDSGFQRSHLSQELISSYDQYDKEYFENEVKIQVAIAGRLVSKRG 80
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
GK F ++D +G IQ+Y K+ + D++ K D+GDI+GV G + +T GELSV
Sbjct: 81 KGKAGFAHIQDMAGRIQIYVRKDAIGEDRYLWFKQ-ADLGDIVGVKGYVFKTNTGELSVH 139
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
F LTK+L PLPDK+HGLT+V++RYRQRY+D+IS + F R+ I+ +IR+ ++
Sbjct: 140 AEEFYPLTKALRPLPDKFHGLTNVEQRYRQRYLDLISNDDSRQRFINRSMIIRQIRRYLD 199
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
LG++EVETPVL AGGA A+PF+T+HN+L +LYLRIATELHLKR+++GGFEK+YE+G
Sbjct: 200 DLGYLEVETPVLHNIAGGATAKPFITHHNALDMELYLRIATELHLKRLVVGGFEKVYELG 259
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R+FRNEG+ T HNPEFTTIE+Y AYS Y M++ E ++ A G+ IDY G +I
Sbjct: 260 RVFRNEGIDTTHNPEFTTIEIYTAYSVYTDCMDLVENLIRTVAKEAIGQTVIDYAGQKID 319
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
LE PW R M +++KE TG+DF +E T + + + +VG+
Sbjct: 320 LETPWARRHMVDMIKEYTGVDF---------WQEMTFEEAKALAKEHHVPLNDHDNTVGH 370
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
++N FE E K +QPTFV +P+E+SPLA+ + T+RFELFI G E ANAF+EL
Sbjct: 371 VINNFFEEYCEDKCIQPTFVYGHPVEVSPLARKNDEDPRFTDRFELFIVGNEYANAFTEL 430
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
TDP+DQR R E Q ++EK + +D ++ V DDDF+ ALEYGMP
Sbjct: 431 TDPIDQRERFEAQ-----------MAEKDAG-------NDEAHPV--DDDFLEALEYGMP 470
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P G+G+G+DRL MLLT++ SIRDV+ FP L+
Sbjct: 471 PTGGIGIGVDRLAMLLTDAQSIRDVLLFPTLR 502
>gi|269797573|ref|YP_003311473.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094202|gb|ACZ24193.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 506
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 328/513 (63%), Gaps = 38/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++E + +G+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDYAKDIKEDFFLKYDGQP-------VVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L + + +K+ +DIGDI+GV G + +T GE+++
Sbjct: 71 SHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKM-LDIGDIIGVEGHVFKTHTGEVTI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR++IV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYM 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG ++++E+
Sbjct: 190 MRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMDRVFEM 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 250 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 310 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTENDGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 360 KILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|312869848|ref|ZP_07729989.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
gi|417885255|ref|ZP_12529410.1| lysine--tRNA ligase [Lactobacillus oris F0423]
gi|311094627|gb|EFQ52930.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
gi|341595910|gb|EGS38547.1| lysine--tRNA ligase [Lactobacillus oris F0423]
Length = 498
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 326/516 (63%), Gaps = 31/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+ G+EP+ ++ R H A L + Y + +E N + + V++AGR+ +R
Sbjct: 10 VRREKMEELKEAGIEPFGRRFKRDHLAQDLHDEYDQY-DKDELNEKGEMVTIAGRMTRKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK F D +G IQ+Y K+ ++ D+ + DIGD LG+ G + +T GEL+V
Sbjct: 69 SSGKAGFADFVDRTGKIQVYARKD-MVGDEPYHIFKRADIGDFLGIEGDVIKTNTGELTV 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ L+K+L PLP+K+ G+TD + YRQRY+D+IS PE F +R I+ +RK +
Sbjct: 128 RAHKITFLSKALRPLPNKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYM 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF EVETP+L AGGA ARPFVT+HN+L D+YLRIATEL+LKR+++GGFE++YE+
Sbjct: 188 DDHGFTEVETPILNTQAGGANARPFVTHHNALDIDMYLRIATELYLKRLIVGGFERVYEL 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTT+E Y AY D+Q +M+ TE IV A V+ I YQG EI
Sbjct: 248 GRIFRNEGMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGREI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L ++R TM + VKE TGIDF + AK+ L K + + G
Sbjct: 308 DLGGDFKRITMVDAVKEKTGIDFGDESMTDDDAKK---------LAEDHKIEFKPYWTKG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++LN FE VE L+QPTFV +YP+E+SPLAK ++ + +T+RFEL++ G E+ NAFSE
Sbjct: 359 HILNAFFEEYVEDTLIQPTFVYEYPVEVSPLAKRNKENPAMTDRFELYVDGSELGNAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q ++ RA E +D D+V ALEYGM
Sbjct: 419 LNDPIDQKERFEMQAKE----RANGNDEAEP----------------VDLDYVQALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLT++ SIRDVI FP ++ ++
Sbjct: 459 PPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMRPEK 494
>gi|302380263|ref|ZP_07268735.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
gi|417926365|ref|ZP_12569764.1| lysine--tRNA ligase [Finegoldia magna SY403409CC001050417]
gi|302312046|gb|EFK94055.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
gi|341589215|gb|EGS32497.1| lysine--tRNA ligase [Finegoldia magna SY403409CC001050417]
Length = 630
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 336/514 (65%), Gaps = 40/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K++EL PY + K+D ++ ++ + + +G+E V +AGR++++
Sbjct: 10 IRRQKLQELLDANENPYVHEKFDNANNTKEISDNFDEF-DGKE-------VKIAGRIMSK 61
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F+ L+D G IQL+ + L + + ++K +DIGDI+GV GS+ +T GE+S
Sbjct: 62 RGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKVKN-MDIGDIVGVEGSIFKTHSGEIS 120
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ S V+L+KSL LP+K+HGL D D RYRQRYVD+I PE+ D F KR++I+S IR+
Sbjct: 121 IRTKSVVLLSKSLQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREF 180
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGF+K+YE
Sbjct: 181 LDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMYLRIANELYLKRLIVGGFDKVYE 240
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ HNPE+T IE+Y+AY+DY MM+ITE++V VNG + + E
Sbjct: 241 MGRMFRNEGMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKSQFGETE 300
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I PW+R TM + +KE I+F+E+ D + A+E A + ++ KD S
Sbjct: 301 IDFTPPWKRITMVDAIKEYADINFDEIETD-EQAREV---AKANNVDIKDNM------SR 350
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++NE FE E KLVQPTFVL +P+E+SPLAK + T RFE F+C +E+ANAFS
Sbjct: 351 GEVINECFEHFCEEKLVQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFS 410
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL +P+DQ+ R +QV E + DD + +D DF+ ALE G
Sbjct: 411 ELNNPIDQKERFLKQV------------------EARENGDDEAQ--MMDYDFLNALEVG 450
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+G+DRL+M+LTN+ SIRD++ FP +K
Sbjct: 451 LPPTGGLGIGVDRLIMMLTNNESIRDIMLFPTMK 484
>gi|294793384|ref|ZP_06758529.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
gi|417000878|ref|ZP_11940872.1| lysine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|294455815|gb|EFG24180.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
gi|333975752|gb|EGL76629.1| lysine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 505
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 328/513 (63%), Gaps = 38/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++E + +G+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDYAKDIKEDFFLKYDGQP-------VVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L + + +K+ +DIGDI+GV G + +T GE+++
Sbjct: 71 SHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKM-LDIGDIIGVEGHVFKTHTGEVTI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR++IV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYM 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG ++++E+
Sbjct: 190 MRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMDRVFEM 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 250 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 310 NLTPPWNRITMAEGVKKYTGEDFD------AVTTIEEARAIADRLNVE----YTENDGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 360 KILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|338730188|ref|YP_004659580.1| lysyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
gi|335364539|gb|AEH50484.1| lysyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
Length = 494
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/520 (44%), Positives = 330/520 (63%), Gaps = 35/520 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
+ VR R +V+ LR G+EPY YK+++THSA +++ + H+ GE +E VS+AGR
Sbjct: 3 DEVRKQRSDEVKSLRELGIEPYPYKFEKTHSAQDVKKQFDHVKPGE--LAEGSEVSIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
+++ R GK +F TLRD +G IQ Y + D + + +V IGDILGV G + R++
Sbjct: 61 IMSIRNHGKSSFFTLRDFTGRIQAYIRSNDVGVDMYKIFEEYVKIGDILGVKGPVFRSKT 120
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
E++VLV F IL KS PLP+K+HGL D + YRQRYVDMI+ E F+ R + +
Sbjct: 121 SEITVLVKEFKILCKSRRPLPEKWHGLKDKEIAYRQRYVDMIANDETLARFKIRYEAIRF 180
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
IR+ + GFVEVETP+L GA A+PF+T +L +LYLRIA EL+LKR ++GGFE
Sbjct: 181 IREFLTKRGFVEVETPILNYIPSGASAKPFITRSEALDCELYLRIAPELYLKRYIVGGFE 240
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K++E+G+ FRNEG+S +H+PEFT+IE+Y+AY+DY MM +TE +++ + GK T+ Y
Sbjct: 241 KVFELGKNFRNEGISYKHSPEFTSIEIYQAYADYHDMMELTESMISELVYHLFGKYTVTY 300
Query: 360 QGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIES 419
QG+E+ PWRR M + +K +D L+ + ET + L ++ V S
Sbjct: 301 QGIELDFRPPWRRIRMRDFIKSKLNVDI------LEDSDETMRKVL------QNHGVDTS 348
Query: 420 SPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMA 479
S ++ +++++ VE ++VQPTFV+DYP+EISPLAK HR LTERFE +CG E+
Sbjct: 349 GLSRAKMIEKLWDL-VESEVVQPTFVMDYPVEISPLAKRHREDPRLTERFEPIVCGMELG 407
Query: 480 NAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTA 539
NAFSEL DP DQ R EQ KL+E+ D +D DF+ A
Sbjct: 408 NAFSELNDPDDQFQRFLEQA-------------------KLREAGDEEAH-RMDLDFIRA 447
Query: 540 LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
LEYGMPP G+G+GIDRL+M+LT+S SIRDVIAFP++ +
Sbjct: 448 LEYGMPPTGGLGIGIDRLMMILTDSPSIRDVIAFPLVSFK 487
>gi|342218534|ref|ZP_08711145.1| lysine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589595|gb|EGS32867.1| lysine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 502
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/530 (45%), Positives = 322/530 (60%), Gaps = 40/530 (7%)
Query: 51 SSSTSTSDREAVR---ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
+ +T D E V +R K+++ G+ P+ K++ H +++ E
Sbjct: 6 QTEQTTQDIEKVNDQMQVRRDKMQQFIDAGIYPFGEKYEWDHHTQDVKKA------AEAL 59
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
E V VAGR++A R GK AF LRD SG IQLY K+ L +D K+ +DIGDI
Sbjct: 60 EKEETPVRVAGRLMALRRHGKTAFCVLRDISGEIQLYFRKDILGEASYDLFKL-LDIGDI 118
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+GV G++ T GE ++ V + +L+K+L PLP+K+HGLTD + RYRQRYVD+I PEV
Sbjct: 119 IGVEGTVFTTHTGETTIRVLGWNLLSKALRPLPEKFHGLTDKETRYRQRYVDLIVNPEVK 178
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F KRAKI+ IR +E F+EVETP+L AGGA ARPF TYHN+L ++YLRIA E
Sbjct: 179 DTFIKRAKIIKGIRHYLEEKQFLEVETPMLHTIAGGAAARPFKTYHNALDMEMYLRIAPE 238
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GG E++YE+ R FRNEG+ TRHNPEFTT+E+Y+AY D + +++ITE +V
Sbjct: 239 LHLKRLIVGGLERVYELNRCFRNEGIDTRHNPEFTTVELYQAYGDLEDVISITENLVAEL 298
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A ++ G I Y EI L W R TM + TG DF + TT RA+ D
Sbjct: 299 ARSLYGTTKITYMDTEIDLTPSWNRMTMVEAIAHYTGEDFT------GITDVTTARAIAD 352
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
L VG ++N FE VE KL+QPT + +P+EISPL K R + T
Sbjct: 353 KLH----VPYTDFDGVGKIINACFEEYVEEKLIQPTIITGHPLEISPLTKQQRDNPLFTY 408
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ GRE+AN FSEL DPLDQR R Q+ E+ + DD +
Sbjct: 409 RFEAFVYGRELANGFSELNDPLDQRNRFLAQM------------------EERERGDDEA 450
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
++ +D+D+ ALEYG+PP G+G+GIDRLVMLLTNSASIRDV+ FP +K
Sbjct: 451 HQ--MDEDYCRALEYGLPPTGGLGIGIDRLVMLLTNSASIRDVLLFPTMK 498
>gi|167758612|ref|ZP_02430739.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
gi|167663808|gb|EDS07938.1| lysine--tRNA ligase [Clostridium scindens ATCC 35704]
Length = 656
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/536 (44%), Positives = 330/536 (61%), Gaps = 40/536 (7%)
Query: 43 GTRNRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHL 101
G N D +R +R +K+ +L++ G +P+ K+D T A ++++ Y +
Sbjct: 3 GEGNVAEQEKKVQEPDLNQLRKVRREKLADLQANGKDPFLITKYDVTAHAAEIKDNYETM 62
Query: 102 ANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF 161
E VSVAGR++ +R GK +F + D SG IQ Y ++ + D + K
Sbjct: 63 --------EGKQVSVAGRIMQKRVMGKASFCNILDQSGNIQSYVARDSVGEDSYKDFKK- 113
Query: 162 VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMI 221
+DIGDI+G+ G + +T+ GE+S+ ++ +L+KSL LP+KYHGLT+ D RYRQRYVD+I
Sbjct: 114 LDIGDIVGIEGEVFKTKTGEISIHASAVNLLSKSLQILPEKYHGLTNTDMRYRQRYVDLI 173
Query: 222 SKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLY 281
E D F KR++IVS IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L D
Sbjct: 174 MNTESRDTFIKRSRIVSAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALDEDFK 233
Query: 282 LRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITE 341
LRI+ EL+LKR+++GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE
Sbjct: 234 LRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTE 293
Query: 342 EIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETT 401
+ H A V G I Y GVE+ L +P+ R TM + VK+ G+D+NE V+
Sbjct: 294 NLYRHVAQEVLGTTIITYNGVEMDLGKPFERITMIDAVKKYAGVDWNE------VSTLEE 347
Query: 402 LRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRR 461
RAL D K E G++L+ FE E L+QPTFV+D+PIEISPL K
Sbjct: 348 ARALAD----KHHVEYEDRHKKGDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPE 403
Query: 462 HAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLK 521
ERFE F+ G EMANA+SEL DP+DQR R + Q +E L
Sbjct: 404 DPNYVERFEFFMNGWEMANAYSELNDPIDQRERFKAQ------------------EELLA 445
Query: 522 ESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ D+ + T D+DF+ ALE GMPP G+G GIDR+ ML+T+SA+IRDV+ FP +K
Sbjct: 446 QGDEEAN--TTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFPTMK 499
>gi|306825318|ref|ZP_07458660.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432754|gb|EFM35728.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 496
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/515 (44%), Positives = 333/515 (64%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V +R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFADL-DKEQLHELNETATIAGRLVTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + +D K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDRDGQIQIYVRKDTVGDENYDIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA A+PF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGHDFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIALELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT IE+Y+AY+D+ +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + DL + L N+ +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DLTFEEAV-------ALANEKHVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NA+S
Sbjct: 363 GHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAYS 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D D++ ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|331002786|ref|ZP_08326300.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413275|gb|EGG92643.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 647
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/529 (44%), Positives = 337/529 (63%), Gaps = 40/529 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESN 108
S+ +T D + R K+ EL++ +P+ K+D + +++ + L
Sbjct: 4 SNEPMTTEDLNHILRARRDKLSELQAANNDPFFITKYDVDKHSTDIKDNFEEL------- 56
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V++AGR++++R GK +F ++D G IQ Y ++ + D++ K +DIGDI+
Sbjct: 57 -DGKSVNIAGRLMSKRVMGKASFCHVQDLKGRIQAYVARDAVGEDEYKAFKK-LDIGDIV 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
G++G + +T+ GE+S+ +L+KSL PLP+K+HGLTD D RYRQRYVD+I +V D
Sbjct: 115 GITGDVFKTQTGEISLHATKVELLSKSLKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKD 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI++EIRK ++ GF+EVETP+L AGGA ARPF T+ N+L D+ LRI+ EL
Sbjct: 175 TFIKRSKIITEIRKFLDGQGFMEVETPMLVSNAGGAAARPFNTHFNALDEDVKLRISLEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + H A
Sbjct: 235 YLKRLIVGGMERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRHLA 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y I L +P+ R TM + +K+ +GIDF E+ ETT A
Sbjct: 295 EVVCGSTTIPYAEAMIDLGKPFERITMVDAIKKYSGIDFEEI--------ETTEAAKALA 346
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
E +F E + G+++N FE VE KL+QPTFV+D+PIE+SPL K R ER
Sbjct: 347 KEKGIEF--EERHTRGDIINLFFEEFVEDKLIQPTFVMDHPIEVSPLTKKKPRDPRYVER 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANA+SEL DP+DQR R Q E+ AA E+++ H+
Sbjct: 405 FELFIYGREMANAYSELNDPIDQRERFLAQ-----EEAFAAGDEEAN----------HT- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 449 ----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 493
>gi|169824684|ref|YP_001692295.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
gi|167831489|dbj|BAG08405.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
Length = 636
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 336/514 (65%), Gaps = 40/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K++EL PY + K+D ++ ++ + + +G+E V +AGR++++
Sbjct: 10 IRRQKLQELLDANENPYVHEKFDNANNTKEISDNFDEF-DGKE-------VKIAGRIMSK 61
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F+ L+D G IQL+ + L + + ++K +DIGDI+GV GS+ +T GE+S
Sbjct: 62 RGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKVKN-MDIGDIVGVEGSIFKTHSGEIS 120
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ S V+L+KSL LP+K+HGL D D RYRQRYVD+I PE+ D F KR++I+S IR+
Sbjct: 121 IRTKSVVLLSKSLQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREF 180
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGF+K+YE
Sbjct: 181 LDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMYLRIANELYLKRLIVGGFDKVYE 240
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ HNPE+T IE+Y+AY+DY MM+ITE++V VNG + + E
Sbjct: 241 MGRMFRNEGMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKSQFGETE 300
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I PW+R TM + +KE I+F+E+ D + A+E A + ++ KD S
Sbjct: 301 IDFTPPWKRITMVDAIKEYADINFDEIETD-EQAREV---AKANNVDIKDNM------SR 350
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++NE FE E KLVQPTFVL +P+E+SPLAK + T RFE F+C +E+ANAFS
Sbjct: 351 GEVINECFEHFCEEKLVQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFS 410
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL +P+DQ+ R +QV E + DD + +D DF+ ALE G
Sbjct: 411 ELNNPIDQKERFLKQV------------------EARENGDDEAQ--MMDYDFLNALEVG 450
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+G+DRL+M+LTN+ SIRD++ FP +K
Sbjct: 451 LPPTGGLGIGVDRLIMMLTNNESIRDIMLFPTMK 484
>gi|336421287|ref|ZP_08601446.1| hypothetical protein HMPREF0993_00823 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336001473|gb|EGN31610.1| hypothetical protein HMPREF0993_00823 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 647
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/521 (44%), Positives = 328/521 (62%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K+ +L++ G +P+ K+D T A ++++ Y + E VSV
Sbjct: 12 DLNQLRKVRREKLADLQANGKDPFLITKYDVTAHAAEIKDNYETM--------EGKQVSV 63
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++ +R GK +F + D SG IQ Y ++ + D + K +DIGDI+G+ G + +
Sbjct: 64 AGRIMQKRVMGKASFCNILDQSGNIQSYVARDSVGEDSYKDFKK-LDIGDIVGIEGEVFK 122
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ ++ +L+KSL LP+KYHGLT+ D RYRQRYVD+I E D F KR++I
Sbjct: 123 TKTGEISIHASAVNLLSKSLQILPEKYHGLTNTDMRYRQRYVDLIMNTESRDTFIKRSRI 182
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
VS IR+ ++ GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++G
Sbjct: 183 VSAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALDEDFKLRISLELYLKRLIVG 242
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 243 GLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTI 302
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I Y GVE+ L +P+ R TM + VK+ G+D+NE V+ RAL D K
Sbjct: 303 ITYNGVEMDLGKPFERITMIDAVKKYAGVDWNE------VSTLEEARALAD----KHHVE 352
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++L+ FE E L+QPTFV+D+PIEISPL K ERFE F+ G
Sbjct: 353 YEDRHKKGDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPEDPNYVERFEFFMNGW 412
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + Q +E L + D+ + T D+DF
Sbjct: 413 EMANAYSELNDPIDQRERFKAQ------------------EELLAQGDEEAN--TTDEDF 452
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+ ML+T+SA+IRDV+ FP +K
Sbjct: 453 LNALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFPTMK 493
>gi|282850021|ref|ZP_06259403.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|282580210|gb|EFB85611.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
Length = 505
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 328/513 (63%), Gaps = 38/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ A ++E + +G+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFVVKDYAKDIKEDFFLKYDGQP-------VVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L + + +K+ +DIGDI+G+ G + +T GE+++
Sbjct: 71 SHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKM-LDIGDIIGIEGHVFKTHTGEVTI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR++IV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYM 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG ++++E+
Sbjct: 190 MRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMDRVFEM 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 250 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 310 NLTPPWNRITMAEGVKKYTGEDFD------AVTTIEEARAIADRLNVE----YTENDGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 360 KILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|294783903|ref|ZP_06749225.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294479715|gb|EFG27494.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 493
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/523 (44%), Positives = 341/523 (65%), Gaps = 44/523 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++ + K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESYGIKAFGSKYDK---QIMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L ++FD + +++GDI+GV G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEEFDHIVKMLNVGDIIGVEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I P+V F KR +I+
Sbjct: 120 HTEELTLRVKSISLLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRSTFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+RK ++ GF+EVETP++ GGA A+PFVT+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++++ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDK 414
+Y GV++ L + ++R M +++K+ TG+DF + K+AKE +
Sbjct: 300 EYDGVQLSL-KNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVE----------- 347
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V + SVG+++NE FE E ++VQPTFV +P+EISPLAK + ++ T+RFELFI
Sbjct: 348 -VADHMDSVGHVINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAF+EL DP DQR R E QV +E L+ +++ + E+ D+
Sbjct: 407 KREYANAFTELNDPADQRGRFEAQV-----------------EEALRGNEEATPEI--DE 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
FV ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 448 SFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|197121548|ref|YP_002133499.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
gi|220916312|ref|YP_002491616.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|238689875|sp|B4UGU5.1|SYK_ANASK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|254782468|sp|B8JFW2.1|SYK_ANAD2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|196171397|gb|ACG72370.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
gi|219954166|gb|ACL64550.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 513
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/531 (45%), Positives = 342/531 (64%), Gaps = 34/531 (6%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN--GEESNSEND 112
T++RE + A R+KK E LR+ G+ P+ W H A+ E+ RH + EE +
Sbjct: 6 GTTEREII-AQRLKKAEALRALGVNPFGNGWQPRHLAD---ELLRHYGDQPAEEIAKDPG 61
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
S+AGRV+A R+FGK AFL +RD S +Q++ +K+R+ F+ K+ +DIGDI+G G
Sbjct: 62 DWSLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGEQAFEVFKL-LDIGDIVGAEG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
RT+ GEL++ +F ILTK+ PLP+K+HGLTDV++RYRQRYVD++ P V + F K
Sbjct: 121 PATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVK 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGA--AGGAEARPFVTYHNSLGRDLYLRIATELHL 290
RA+IVS IR+ +++ G++EVETP L AGGA ARPF T+HN+L DL LRIATELHL
Sbjct: 181 RARIVSGIRRFLDARGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDLKLRIATELHL 240
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG +++YEIGRI+RNEG+ RHNPEFT+IE Y+AY+ ++ +M +TEE++ A+
Sbjct: 241 KRLVVGGLDRVYEIGRIWRNEGIDRRHNPEFTSIEFYQAYATHEDLMRLTEELMHRLAVE 300
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G + +QG I L P+ R +M + A G+ ++ +A E RA +
Sbjct: 301 VTGGPVVTFQGQAIDLTPPFPRVSMLEVGARALGLSPDDALAGRGLA-EALSRAAAREND 359
Query: 411 NKDKFVIESSP--SVGNLLNEVFEIVVEPKLVQ--PTFVLDYPIEISPLAKPHRRHAGLT 466
++D + +E + + G + FEI EP+L + P FV+D+P+E SPL++ L
Sbjct: 360 SEDAWKLEQAAKKTPGEAVALAFEIFGEPQLPKDRPAFVVDFPLETSPLSRRRDADPRLV 419
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
+RFELF G E+ANAFSEL DP DQRAR E Q+R K++ E+
Sbjct: 420 DRFELFAAGMELANAFSELNDPADQRARFEAQMRA-----------KAAGDEE------- 461
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ D+DFV ALE+GMPP +G G+GIDRL ML T+SASIRDVI FP+LK
Sbjct: 462 --AMPYDEDFVRALEHGMPPTAGEGIGIDRLAMLFTDSASIRDVILFPLLK 510
>gi|406837942|ref|ZP_11097536.1| lysyl-tRNA ligase [Lactobacillus vini DSM 20605]
Length = 496
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 331/516 (64%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR +G++P+ +++ R + +L Y L+ E+ V++AGR+VA+R
Sbjct: 13 VRREKMDELRQEGIDPFGHRFVRDSMSQELHNKYDGLSK-EKLEELEAKVTIAGRMVAKR 71
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G +Q+Y K+ + +++ K D+GD LG++G++ +T+ GEL++
Sbjct: 72 GKGKVGFADIQDRDGRMQIYVRKDVIGEEKYHIFKR-SDLGDHLGLTGTVIKTDTGELTL 130
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V L+K+L PLPDK+HGL +V++ YRQRY+D+IS + + F KR KI+S IRK +
Sbjct: 131 RVTDLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLISNRDSFERFLKRTKIISAIRKYL 190
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GG E++YEI
Sbjct: 191 DEQRFIEVETPVLHNQAGGAAARPFITHHNALDINLYLRIALELHLKRLIVGGMERVYEI 250
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY D+ +M+ TE I A V+ I+YQG I
Sbjct: 251 GRVFRNEGIDTKHNPEFTMLESYVAYYDFTDVMDETEGIFKAAAKVVSNNSQIEYQGNPI 310
Query: 365 CLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
+P++R M + +KEATGIDF + LG K+A E + E
Sbjct: 311 DFNKPFKRIHMVDAIKEATGIDFWQPMTLGEARKLADENHVH-------------YEPYW 357
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE E K+ PTFV +PIE+SPLAK + + T+RFELFI G E ANA
Sbjct: 358 KVGHIINEFFETFCEAKIKDPTFVYGHPIEVSPLAKKNAKDPRFTDRFELFILGNEFANA 417
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR R E QV++ R A E +D+D+V ALE
Sbjct: 418 FSELNDPIDQRQRFEAQVKE----REAGNEEAEG----------------IDEDYVEALE 457
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRLVML+T++ SIRDV+ FP L+
Sbjct: 458 YGMPPTGGLGIGIDRLVMLMTDAPSIRDVLLFPTLR 493
>gi|342733093|ref|YP_004771932.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384456461|ref|YP_005669059.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417963869|ref|ZP_12605722.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-3]
gi|417967735|ref|ZP_12608801.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-co]
gi|418015499|ref|ZP_12655064.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418373352|ref|ZP_12965441.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330548|dbj|BAK57190.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345505834|gb|EGX28128.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984807|dbj|BAK80483.1| lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380331572|gb|EIA22595.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-3]
gi|380340836|gb|EIA29383.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-co]
gi|380341188|gb|EIA29681.1| Lysyl-tRNA synthetase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 490
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 332/516 (64%), Gaps = 42/516 (8%)
Query: 65 LRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R K+ +L+ KG++P+ YK D + + + + Y + E V +AGR++ +
Sbjct: 9 IRRNKLSDLQEKGMDPFNVYKVDVSDYSKNIIDNYL--------DYEGKIVKLAGRIMTK 60
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F+T++D G IQ++ + + + + D + + DIGDI+ V G + +T+ GE++
Sbjct: 61 RGQGKAGFITIQDTLGQIQIFIKVDIVGKETLDSVFSY-DIGDIIWVEGEVFKTKVGEVT 119
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ V +++KSL LP+K+HG+TD D RYR R +D+I +V DVF KR+KI+SEIR
Sbjct: 120 IRVLKIDLISKSLRVLPEKFHGITDPDLRYRHREIDIIMNRDVKDVFLKRSKIISEIRLF 179
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ G++E ETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++ GF+K+YE
Sbjct: 180 LDNRGYLEAETPILSLIAGGAAARPFLTHHNTLNMDMYLRIATELYLKRLIVSGFDKVYE 239
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G+ FRNEG+ +HNPEFT IE+YEAYSDY MM +TE++++ L V G + ++YQG E
Sbjct: 240 MGKNFRNEGIDIKHNPEFTMIELYEAYSDYNDMMRLTEDLISSVCLKVCGSMKVEYQGTE 299
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELG--NDLKVAKETTLRALGDGLENKDKFVIESSP 421
I PWRR TM + V+E +GIDF L + +AKE L D
Sbjct: 300 IDFTPPWRRITMLDAVREYSGIDFKTLTIEDSYNIAKEHELEFKKD----------LKDC 349
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G +LN +FE VE KL+QPTF++DYP+EISPL K R TERFE FI GRE+ NA
Sbjct: 350 SKGEILNAMFEKYVENKLIQPTFIIDYPVEISPLTKKKRGDDDFTERFEGFIYGREICNA 409
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
+SEL DP+ QR R ++Q E+ DD +Y ++D+DF+ +LE
Sbjct: 410 YSELNDPIVQRERF---LKQELERELG---------------DDEAY--SIDEDFMYSLE 449
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDR+VM LTNS SIRDVI FP +K
Sbjct: 450 YGMPPTGGLGIGIDRIVMFLTNSYSIRDVILFPTMK 485
>gi|310658261|ref|YP_003935982.1| lysine tRNA synthetase, inducible [[Clostridium] sticklandii]
gi|308825039|emb|CBH21077.1| lysine tRNA synthetase, inducible [[Clostridium] sticklandii]
Length = 506
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/538 (42%), Positives = 342/538 (63%), Gaps = 53/538 (9%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANG 104
N + +S + S ++ +R ++KK++E G P+ K+ +TH + Q+++ + L
Sbjct: 3 NDQMNSETLSLNEMLQIRRDKLKKLQE---AGKNPFKIEKYIKTHHSKQVKDNFEKLEGS 59
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
E VS+AGR+++ R GK +F+ ++D+ G IQ+Y ++ + D + V D+
Sbjct: 60 E--------VSLAGRIMSMRGHGKASFIDIQDEQGRIQVYVRQDAIGDDSYTDF-VTYDM 110
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+GV G++ T KGE SV + +LTKSL LP+KYHGL D D RYRQRYVD+I P
Sbjct: 111 GDIIGVEGTVFMTNKGEQSVKASKVALLTKSLQILPEKYHGLKDPDLRYRQRYVDLIVNP 170
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
+V + F R+K + +++ ++ F+EV+TP+L AGGA ARPF+T+HN+L D+Y+RI
Sbjct: 171 DVKEAFLIRSKAIKALKEYLDERDFLEVDTPILSTIAGGATARPFITHHNTLDIDMYMRI 230
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A EL+LKR+++GGFE++YE+G++FRNEG+S +HNPE+T IE+Y+AY+DY+ +M +TEE V
Sbjct: 231 ANELYLKRLIVGGFERVYELGKMFRNEGMSIKHNPEYTAIEVYQAYADYEDIMRLTEEAV 290
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
A G I+YQG EI L PWRR +M + +KE GIDFNE+ D +KVAKE
Sbjct: 291 ACMAQKSLGTTKINYQGTEIDLTPPWRRLSMIDAIKEFKGIDFNEIQTDEEAIKVAKENH 350
Query: 402 LRALGDGLENKDKFVIESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
IE +P + G ++ +FE E L+QPTF+ +P+E+SPL+K +
Sbjct: 351 ---------------IEITPVMNRGFVIAAMFEEFCEEHLIQPTFITHHPVEVSPLSKRN 395
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
LT RFE F+ E+ANAFSEL DP+DQR R +Q++Q
Sbjct: 396 PDDPRLTNRFEAFVNTWEIANAFSELNDPIDQRERFMDQLKQR----------------- 438
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ DD +Y LD+DF+ A+E G+PP G+G+GIDR++MLLTNS+SIRDVI FP +K
Sbjct: 439 -ELGDDEAY--MLDEDFLNAIEVGLPPTGGLGIGIDRVIMLLTNSSSIRDVILFPTMK 493
>gi|126701178|ref|YP_001090075.1| lysyl-tRNA ligase [Clostridium difficile 630]
gi|115252615|emb|CAJ70458.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Clostridium
difficile 630]
Length = 509
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/539 (41%), Positives = 336/539 (62%), Gaps = 50/539 (9%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANG 104
N++++ + D V +R K+++L+ G +P+ ++DRTH + +++ + L
Sbjct: 4 NQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMDIKDNFDSL--- 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
E +AGR++++R GK F+ ++D G IQ Y + + +++ + DI
Sbjct: 61 -----EGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTY-DI 114
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+G+ G + +T+KGE+SV S V+L KSL LP+KYHGL D + RYRQRYVD+I P
Sbjct: 115 GDIVGIEGEIFKTKKGEISVKAKSVVLLCKSLQVLPEKYHGLKDQELRYRQRYVDLIVNP 174
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV + F R K + +R ++ GF+EVETP+L AGGA ARPF+T HN+L +YLRI
Sbjct: 175 EVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIPMYLRI 234
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A EL+LKR+++GGF+K+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY MM ITE ++
Sbjct: 235 ANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAYADYTDMMEITENVI 294
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
H A G + ++YQG EI PW+R +M + VKE +G+DF+ + D L+VA+E
Sbjct: 295 AHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEYSGVDFSTINTDEEALEVAREKG 354
Query: 402 LRALGDGLENKDKFVIESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
IE P + G ++N FE E KL+QPTF+ +P+E+SPL+K +
Sbjct: 355 ---------------IEIKPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRN 399
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
T+RFE F E+ANAFSEL DP+DQ+ R +Q+R K
Sbjct: 400 VEDPRRTDRFEAFANKWELANAFSELNDPIDQKGRFIDQLR------------------K 441
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKI 578
+ DD ++E +D+DF+ ALE G+PP G+G+GIDR++MLLTNS SIRDV+ FP +K+
Sbjct: 442 RELGDDEAFE--MDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMKL 498
>gi|238019653|ref|ZP_04600079.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
gi|237863694|gb|EEP64984.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
Length = 507
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 329/513 (64%), Gaps = 38/513 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E + G+ P+ ++ +A +++ + +G+ V +AGR++ R
Sbjct: 18 IRRDKLAEYEADGIYPFGQRFIVKDNAKDIKDDFFLKYDGQP-------VVIAGRLMTIR 70
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK AF +RD SG IQ+Y K+ L + + +K+ +DIGDI+GV G + +T GE+++
Sbjct: 71 SHGKTAFANVRDKSGDIQVYFRKDVLGEEAYKYVKM-LDIGDIIGVEGHVFKTHTGEVTI 129
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
VN +L+KSL PLP+K+HGL D + RYRQRYVD+I PEV D F KR++IV++IR+ +
Sbjct: 130 KVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYM 189
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L D+Y+RIA EL+LKR+++GG ++++E+
Sbjct: 190 MRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIVGGMDRVFEM 249
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ RHNPEFTTIE Y+AY D + + +TE +V++CA V G I YQG EI
Sbjct: 250 NRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEI 309
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM VK+ TG DF+ V RA+ D L + + +G
Sbjct: 310 NLTPPWNRITMAEGVKKYTGEDFD------AVTTVEEARAIADRLNVE----YTENDGIG 359
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+LN FE VE L+QPT V +P EISPLAK R + TERFE FI GRE+AN FSE
Sbjct: 360 KILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSE 419
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R +Q+++ + DD ++ +D+DFVTALEYG+
Sbjct: 420 LNDPIDQKQRFLDQLKER------------------EAGDDEAHR--MDEDFVTALEYGL 459
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G+G+GIDRLVM LT+SASIRDV+ FP++K
Sbjct: 460 PPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492
>gi|331083387|ref|ZP_08332499.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404080|gb|EGG83628.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 650
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/524 (44%), Positives = 329/524 (62%), Gaps = 46/524 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D + +R +K+ EL+ G +P+ K+D TH + ++++ + L E VS+
Sbjct: 12 DLNQLLKVRREKLTELQENGKDPFQITKYDVTHHSMEVKDAFEEL--------EGKSVSL 63
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F +++D G+IQ Y ++ + D + K +DIGDI+G+ G + +
Sbjct: 64 AGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHYKDFKK-MDIGDIVGIKGEVFK 122
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ +L+KSL PLP+K+HGLT+ D RYRQRYVD+I +V D F KR+KI
Sbjct: 123 TKTGEISIHATEVTLLSKSLKPLPEKFHGLTNTDLRYRQRYVDLIMNADVKDTFIKRSKI 182
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
++ IR + GF+EVETP+L AGGA ARPF T+ N+L D LRI+ EL+LKR+++G
Sbjct: 183 IASIRNYLNGQGFLEVETPMLVANAGGAAARPFETHFNALDEDFKLRISLELYLKRLIVG 242
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + H A V G
Sbjct: 243 GMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTK 302
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKD 413
I Y G+E+ L +P+ R TM + VK+ G+DFNE L VAKE +
Sbjct: 303 IVYNGIEMDLGKPFERITMVDAVKKYAGVDFNEIHTLEEARAVAKEHHVE---------- 352
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
E G++L+ FE E L+QPTFV+D+PIEISPL K + TERFE F+
Sbjct: 353 ---FEERHKKGDILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFM 409
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
G EMANA+SEL DP+DQR R + Q +E L + D+ + T D
Sbjct: 410 NGWEMANAYSELNDPIDQRERFKAQ------------------EELLAQGDEEAN--TTD 449
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GM P G+G GIDR+VMLLT+SA+IRDV+ FP +K
Sbjct: 450 EDFMNALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLFPTMK 493
>gi|399517616|ref|ZP_10759160.1| Lysyl-tRNA synthetase (class II) [Leuconostoc pseudomesenteroides
4882]
gi|398647457|emb|CCJ67187.1| Lysyl-tRNA synthetase (class II) [Leuconostoc pseudomesenteroides
4882]
Length = 495
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/500 (45%), Positives = 332/500 (66%), Gaps = 33/500 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++R+ A +L ++Y + + EE + V++AGR+VA+R GK+ F RD
Sbjct: 27 LDPFGKRFERSAKAQELHDLYDN-STLEELEAGQHEVTIAGRMVAKRGAGKVIFADFRDV 85
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y +++ L + + +K D+GD LG+ G M +TE GEL+VL L+K+L
Sbjct: 86 SGKIQVYAKRDDL-GENYPIIKR-ADLGDFLGIKGIMMKTEAGELTVLATHLTHLSKALR 143
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG++DV+ RYR+RY+D+I+ E F++R+ I+S IR ++ F+EVETP+L
Sbjct: 144 PMPDKFHGISDVETRYRKRYLDLIANEESFKKFQQRSHIISAIRAYMDKNEFLEVETPIL 203
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GG E++YEIGRIFRNEG+ +H
Sbjct: 204 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGMERVYEIGRIFRNEGMDPKH 263
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y +Y D+ +MN TE I A V+ L I YQG EI L + + R M++
Sbjct: 264 NPEFTTMESYASYWDFTDVMNETEGIFKAAASVVSDDLKITYQGTEIDLSKNFERAHMND 323
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEP 437
L+K+ TG+DF + D+ V + L E+ K+ E +VG+++N FE VE
Sbjct: 324 LIKDRTGVDFWQ---DMSVEEAQKL-----ADEHHVKY--EKYWAVGHIINAFFEEFVED 373
Query: 438 KLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEE 497
LVQPTFV +P+E+SPLAK + + T+RFELFI G E ANAF+EL DP+DQRAR E
Sbjct: 374 TLVQPTFVYGHPVEVSPLAKRNADDSRFTDRFELFIMGGEYANAFTELNDPIDQRARFEA 433
Query: 498 QVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRL 557
Q +E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDRL
Sbjct: 434 Q-----------AAERENGNDEAE---------GIDEDFIEALEYGMPPTGGLGVGIDRL 473
Query: 558 VMLLTNSASIRDVIAFPILK 577
+MLLT+S +IRDV+ FP ++
Sbjct: 474 IMLLTDSDTIRDVVLFPTMR 493
>gi|365839721|ref|ZP_09380949.1| lysine--tRNA ligase [Anaeroglobus geminatus F0357]
gi|364563858|gb|EHM41648.1| lysine--tRNA ligase [Anaeroglobus geminatus F0357]
Length = 502
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/516 (45%), Positives = 330/516 (63%), Gaps = 37/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ + G+ P+ K++ H A +++ N E + HVS+AGR++A R
Sbjct: 23 VRREKMRQFAEAGIYPFGQKYEWDHHARDIKD------NAETLAQDGTHVSLAGRLMALR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK AF LRD SG IQLY K+ + ++ K+ +DIGDI+GV G + T GE++V
Sbjct: 77 RHGKTAFCVLRDLSGEIQLYFRKDVVGEKSYELFKL-LDIGDIIGVEGDVFTTHTGEITV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V + +L+KSL PLP+K+HGLTD + RYRQRY+D+I PEV F R++I+ IR+ +
Sbjct: 136 RVEKWTLLSKSLRPLPEKFHGLTDKETRYRQRYLDLIVNPEVTKTFVMRSRIIKGIREYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETP+L AGGA ARPF+T+HN+L D+YLRIA ELHLKR+L+GG E++YE+
Sbjct: 196 DKKNFLEVETPMLHNIAGGAAARPFITHHNALDMDIYLRIAPELHLKRLLVGGLERVYEM 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ TRHNPEFTT+E+Y+AY D + +++ITEE+V+ A+ + G I Y EI
Sbjct: 256 NRCFRNEGIDTRHNPEFTTVELYQAYGDLEDVIHITEELVSELAVKLYGTTKITYLDREI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW+R TM V++ TG DF+ N VA+ RA+ L + +G
Sbjct: 316 ELAAPWQRMTMIEAVEKYTGKDFS---NVTTVAQA---RAVAAELHVE----YGEYDGIG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++N FE VE L+QP + +P+EISPL K + LT RFE FI GRE+AN FSE
Sbjct: 366 KIINSCFEDYVEENLIQPVIITGHPLEISPLTKQDETNPLLTHRFEAFIYGRELANGFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R +Q+ E+RA DD +++ +D+D+ ALEYG+
Sbjct: 426 LNDPVDQRNRFLKQM----EERA--------------HGDDEAHQ--MDEDYCRALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PPA G+G+GIDRLVMLLTNS SIRDV+ FP+ + +Q
Sbjct: 466 PPAGGLGIGIDRLVMLLTNSPSIRDVLLFPLSRPEQ 501
>gi|212704562|ref|ZP_03312690.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
gi|212671961|gb|EEB32444.1| lysine--tRNA ligase [Desulfovibrio piger ATCC 29098]
Length = 528
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 337/513 (65%), Gaps = 33/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R+ K +L G+ + + + H+ + + + + L+ EE ++ D ++AGR+V+ R+
Sbjct: 45 RVVKACDLLDAGVPLFPNDFRKEHAVSWVLDNFGSLS-AEELEAKGDVFAIAGRIVSLRS 103
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK+AF + D+SG IQ Y +E L + ++ +K +D+GDI+GVSG + T+ GEL++
Sbjct: 104 FGKVAFFHIMDESGRIQCYASREELPEEVYNVVKK-LDVGDIVGVSGHLFHTKTGELTIS 162
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+ ++T+S+ PLP+KYHGL D++ RYRQRYVD+I ++FRKR+ IVSE R+ +E
Sbjct: 163 CRNLKLITRSMRPLPEKYHGLKDMETRYRQRYVDLIVTERAREIFRKRSMIVSEFRRFLE 222
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
GF+EVETP++Q AGGA ARPF TYHN+L LY+RIA EL+LKR+L+GGFEK++E+
Sbjct: 223 ERGFMEVETPMMQAVAGGAAARPFETYHNALDLKLYMRIAPELYLKRLLVGGFEKVFELN 282
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+ TRHNPEFT+ E Y AY+++ +M++TEE+ A V G I YQG EI
Sbjct: 283 RNFRNEGIDTRHNPEFTSCEFYWAYANFHDLMDLTEELFARLANKVCGGTVITYQGQEID 342
Query: 366 L-ERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L W R + + + + G E ND ++ +R+ G+ + S S+
Sbjct: 343 LTPGKWTRMSFYESLTKIGGHS-PEFYNDYNKVRD-YIRSRGEKATD--------SESLP 392
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L ++F++ VE KL+QP F+ YP EISPL++ + H LT+RFELFI GRE+ANAFSE
Sbjct: 393 KLHAKLFDLDVEEKLIQPHFIYHYPTEISPLSRRNNEHPDLTDRFELFITGRELANAFSE 452
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQVR EK A DD ++ +D+DF+ ALEYGM
Sbjct: 453 LNDPVDQRLRFEEQVR---EKEAG---------------DDEAH--AMDEDFLRALEYGM 492
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA+G G+GIDRLVMLLT+SASIR+VI FP+L+
Sbjct: 493 PPAAGEGIGIDRLVMLLTDSASIREVILFPLLR 525
>gi|303234996|ref|ZP_07321620.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
gi|302493851|gb|EFL53633.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
Length = 636
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 335/514 (65%), Gaps = 40/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
+R +K++EL PY + K+D ++ ++ + + +G+E V +AGR++++
Sbjct: 10 IRRQKLQELLDANENPYVHEKFDNANNTKEISDNFDEF-DGKE-------VKIAGRIMSK 61
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ F+ L D G IQL+ + L + + ++K +DIGDI+GV GS+ +T GE+S
Sbjct: 62 RGHGKVNFMDLHDSLGRIQLFNKVNELGEENYAKVKN-MDIGDIVGVEGSIFKTHSGEIS 120
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
+ S V+L+KSL LP+K+HGL D D RYRQRYVD+I PE+ D F KR++I+S IR+
Sbjct: 121 IRTKSVVLLSKSLQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREF 180
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGF+K+YE
Sbjct: 181 LDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMYLRIANELYLKRLIVGGFDKVYE 240
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GR+FRNEG+ HNPE+T IE+Y+AY+DY MM+ITE++V VNG + + E
Sbjct: 241 MGRMFRNEGMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKSQFGETE 300
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I PW+R TM + +KE I+F+E+ D + A+E A + ++ KD S
Sbjct: 301 IDFTPPWKRITMVDAIKEYADINFDEIETD-EQAREV---AKANNVDIKDNM------SR 350
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++NE FE E KLVQPTFVL +P+E+SPLAK + T RFE F+C +E+ANAFS
Sbjct: 351 GEVINECFEHFCEEKLVQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFS 410
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL +P+DQ+ R +QV E + DD + +D DF+ ALE G
Sbjct: 411 ELNNPIDQKERFLKQV------------------EARENGDDEAQ--MMDYDFLNALEVG 450
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+G+DRL+M+LTN+ SIRD++ FP +K
Sbjct: 451 LPPTGGLGIGVDRLIMMLTNNESIRDIMLFPTMK 484
>gi|340754868|ref|ZP_08691601.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
gi|373111879|ref|ZP_09526115.1| lysyl-tRNA synthetase [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419840560|ref|ZP_14363948.1| lysine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|421501548|ref|ZP_15948511.1| lysine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313686430|gb|EFS23265.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
gi|371656738|gb|EHO22059.1| lysyl-tRNA synthetase [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386907503|gb|EIJ72210.1| lysine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|402265911|gb|EJU15366.1| lysine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 493
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/523 (44%), Positives = 342/523 (65%), Gaps = 41/523 (7%)
Query: 58 DREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
DR A +L + KK+EEL+ G++P+ K+D+ H + EI +H + E +
Sbjct: 6 DRAAKESLIMEKWKKIEELKEMGIKPFGGKYDKKH---MVGEILKH------TPEEELNF 56
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
AGR+++ R GK+AF + D +G IQ+Y +++ + + F +K+ +++GD++GV G++
Sbjct: 57 KTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDEVGEEAFRLIKM-LNVGDVIGVEGTL 115
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
T GEL++ N +LTK++ LP+K+HGLTDV+ RYR+RYVD+I +V + F KR
Sbjct: 116 FITHTGELTLRGNIVTLLTKNIRALPEKFHGLTDVETRYRKRYVDLIMNRDVKETFLKRT 175
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
I+ E++K ++ GF+EVETP++ GGA ARPFVT+HN+L DLY+RIA EL+LK+++
Sbjct: 176 MIIKELKKYLDDRGFLEVETPMMHPIVGGAAARPFVTHHNTLDIDLYMRIAPELYLKKLI 235
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGF+K+Y++ + FRNEG+STRHNPEFTT+E+Y+AY+D+ MM++TE ++T VNG
Sbjct: 236 VGGFDKVYDLNKCFRNEGMSTRHNPEFTTVELYQAYADFNDMMDLTEGVITSLCQKVNGT 295
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
I + GV++ L + ++R M +L+KE TG+DF + AK AL +
Sbjct: 296 YDISFDGVDLHL-KDFKRVHMVDLIKEVTGVDFWRKDISFEEAK-----ALA---KEHHV 346
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
+ E SVG+++NE FE E K++QPTFV +P+EISPLAK + T+RFELFI
Sbjct: 347 EIAEHMNSVGHVVNEFFEQKCEEKVIQPTFVYGHPVEISPLAKKNEEDPRFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAFSEL DP DQR+R E QV E+ + +D + V +DD
Sbjct: 407 AREYANAFSELNDPADQRSRFEAQV------------------EEAERGNDEATPV-IDD 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+V ALEYG+PP G+G+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 448 DYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|366054144|ref|ZP_09451866.1| lysyl-tRNA synthetase [Lactobacillus suebicus KCTC 3549]
Length = 498
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 334/516 (64%), Gaps = 38/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++ELR G++P+ ++++R + A +L + + + E+ N + ++AGR+V++R
Sbjct: 15 VRREKMDELRDNGIDPFGHRFERDYLAKELHDEFDG-TDKEDLNELHKTATIAGRMVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F + D SG IQ+Y K+ L D + K DIGD LG++G + +T+ GEL++
Sbjct: 74 GKGKVGFADILDRSGRIQIYVRKDILGEDVYHIFKR-ADIGDFLGMTGDVIKTDTGELTL 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S L+K+L PLPDK+HGL D ++ YRQRY+D+IS + + F+ R+KI++ IR +
Sbjct: 133 RPTSLTFLSKALRPLPDKFHGLRDQEQIYRQRYLDLISNQDSFNRFKMRSKIITAIRSYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA ARPF+T+HN+L +LYLRIA ELHLKR+++GGFE++YEI
Sbjct: 193 DGEDFLEVETPVLHNQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGFERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T+HNPEFT +E Y AY D+ +M+ TE I A AV+ I YQG E+
Sbjct: 253 GRVFRNEGMDTKHNPEFTMLETYVAYFDFHDVMDETEGIFKAAASAVSEDGKIVYQGTEL 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTL---RALGDGLENKDKFVIESSP 421
L + + R M + +K+ TG+DF KE +L R + D E+ K+ E
Sbjct: 313 DLHKKFERIHMVDAIKKYTGVDF---------WKEMSLDEARKIAD--EHHVKY--EEYW 359
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
VG+++NE FE V+ KL QPTFV +P+EISPLAK + T+RFEL+I G E ANA
Sbjct: 360 QVGHIINEFFEQFVQEKLEQPTFVYGHPVEISPLAKKNADDPRFTDRFELYIIGNEFANA 419
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
F+EL DP+DQRAR E QV++ R A E +D+DF+ ALE
Sbjct: 420 FTELNDPVDQRARFEAQVKE----REAGNDEAEG----------------IDEDFIEALE 459
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPP G+G+GIDRL MLLT+S SIRDVI FP ++
Sbjct: 460 YGMPPTGGLGIGIDRLAMLLTDSPSIRDVILFPTMR 495
>gi|295397836|ref|ZP_06807900.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
gi|294973933|gb|EFG49696.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
Length = 506
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/533 (44%), Positives = 337/533 (63%), Gaps = 40/533 (7%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
+A+ ++ +D+ VR +K+ EL G P+A ++R A L + Y + +
Sbjct: 9 QATDATEGLNDQLLVRR---EKMAELEEGGYNPFASGFERNAVAADLHKKYEAYDKAQLA 65
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
+D V++AGR+V +R GK F ++D SG IQ+Y ++ + + +D L D+GDI
Sbjct: 66 EM-DDVVAIAGRLVTKRGKGKAGFGNIQDMSGNIQIYVRRDHIDEEDYDHLWKKADLGDI 124
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+GV G++ RT GELSV FV LTK+L PLPDKYHGLTDV++ YR RY+D+I+ E
Sbjct: 125 VGVEGTLMRTNTGELSVKATKFVHLTKALRPLPDKYHGLTDVEQIYRHRYLDLIANRESF 184
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D F KR++I+ E+R ++S ++EVETPVL AGGA ARPF+T+HN+L +LYLRIA E
Sbjct: 185 DRFTKRSQIIREVRHYLDSNDYLEVETPVLHNIAGGASARPFITHHNALDMELYLRIALE 244
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
LHLKR+++GG E++YEIGR+FRNEG+ T HNPEFT +E+Y AYS +M++ E +
Sbjct: 245 LHLKRLVVGGMERVYEIGRVFRNEGIDTTHNPEFTMLEVYTAYSKMTDVMDLVEGLFQSV 304
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRA 404
A V G +I Y G I L WRR M + VKE +G+DF + D + +AKE ++
Sbjct: 305 AEKVLGTTSITYDGQAIELGGKWRRVHMVDAVKEVSGVDFWQEMTDEEARAIAKEHHVQ- 363
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
+E++ +VG+++NE FE VE L+QPTFV +P ISPLA+ +
Sbjct: 364 ------------VENNFTVGHVINEFFEEFVEDTLIQPTFVYGHPTAISPLARKNEDDPR 411
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
T+RFE+FI G E NAF+ELTDP+DQR R E QV+ EK+ E +
Sbjct: 412 FTDRFEVFIVGSESGNAFTELTDPIDQRERFEAQVK-----------EKA-------EGN 453
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D ++ LD++F+ ALE GMPP G+G+GIDR+VMLLT++ SIRDV+ FP ++
Sbjct: 454 DEAH--PLDEEFLEALETGMPPTGGLGIGIDRMVMLLTDAQSIRDVLLFPTMR 504
>gi|424862953|ref|ZP_18286866.1| lysine--tRNA ligase [SAR86 cluster bacterium SAR86A]
gi|400757574|gb|EJP71785.1| lysine--tRNA ligase [SAR86 cluster bacterium SAR86A]
Length = 496
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/513 (45%), Positives = 342/513 (66%), Gaps = 34/513 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R KK+E+LR KG + Y + ++A++L E Y + + + ++SVAGR+V +R
Sbjct: 16 RRKKLEQLRDKG-DAYGNSFKPKNNASKLHEEYGVFSKEDLEKKDIKNISVAGRIVLKRV 74
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
G +F TLRD SG IQ+Y K + ++ K + D+GDI+GVSGS+ RT+ EL++
Sbjct: 75 MGNASFATLRDSSGDIQIYVTKNNVDESVYEDFKTW-DLGDIVGVSGSLFRTKTDELTID 133
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V ++TKSL P+P+K+ GLTD++ RYRQRY+D+++ E +VF KR KI+ +RK +
Sbjct: 134 VWDLEMITKSLRPMPEKFKGLTDIEARYRQRYLDLMTNNETKEVFVKRTKIIDSMRKKMN 193
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
G++EVETP++ AGGA ARPFVT HN+LG+DLYLRIA EL+LKR+L+GGF++++EI
Sbjct: 194 ECGYLEVETPMMHPLAGGAVARPFVTQHNALGQDLYLRIAPELYLKRLLVGGFDRVFEIN 253
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEGLST+HNPEFT +E Y+AY+ Q M++T+EI+T+ A A K I + +EI
Sbjct: 254 RSFRNEGLSTKHNPEFTMMEWYQAYASMQDQMDLTKEIITNAADAAGCKSKIQWGDLEIN 313
Query: 366 LERPWRRETMHNLVKEATGIDFN-ELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ +++ T+ +L+ +DFN EL D ++ + L + L++K K IE + +G
Sbjct: 314 LDN-FKQSTLSDLI-----LDFNSELSKD-DLSNQKKLEKI---LKDK-KVKIEKNWGIG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+L EVFE VE +L+ PTFV +YP+E+SPL++ + + +RFELFI G+E AN F E
Sbjct: 363 RILLEVFEETVEDQLIDPTFVTEYPVEVSPLSRRNETNPDYADRFELFIGGKEFANGFCE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP DQ +R E+Q V+ K S KE+ D+ D D++TALE+GM
Sbjct: 423 LNDPDDQASRFEDQ-----------VAAKDSGD---KEAMDY------DHDYITALEHGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PPA G+G+G+DRLVMLLTN +SIRDV+ FP LK
Sbjct: 463 PPAVGVGMGVDRLVMLLTNQSSIRDVLLFPQLK 495
>gi|118581419|ref|YP_902669.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|118504129|gb|ABL00612.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 503
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/513 (45%), Positives = 330/513 (64%), Gaps = 36/513 (7%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +KV+ L G+ PY + H++ +++ + E+ ++E+D VAGR++ARR+
Sbjct: 21 RRRKVDTLWEAGINPYPNDFRPEHTS---ADVFAAYGDKEQVDAEHDIFVVAGRILARRS 77
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF+ ++D G +QLY +K+ + F + F DIGDI+GV G RT+ ELS+
Sbjct: 78 FGKAAFIKIQDRKGRLQLYIKKDEIGEQAFADFETF-DIGDIVGVEGFPFRTKTNELSLH 136
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
+L KSL PLP+K+HGLTDV+ RYRQRYVD+I PE ++F KR++I++ IR +
Sbjct: 137 AKKIRLLVKSLHPLPEKFHGLTDVETRYRQRYVDLIVNPESREIFIKRSRIINLIRAFMT 196
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
+ F+EVETP++Q GGA A+PF+T+HN+L L+LRIA EL+LKR+++GG E+++EI
Sbjct: 197 ARDFLEVETPMMQRIPGGATAKPFITHHNALDMQLFLRIAPELYLKRLVVGGMERVFEIN 256
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y+AY+ Y+ +MN TEE+ H A V G L QG EI
Sbjct: 257 RNFRNEGISVRHNPEFTMMEFYQAYATYEDLMNFTEELFCHVAQEVLGTLDFVNQGREIS 316
Query: 366 LERPWRRETMHNLVKEATGIDFNELGN-DLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+RPW+R T+ + + E ID +L + DL + + A GL+ D G
Sbjct: 317 FQRPWKRLTVRDAILEYGDIDAKKLDDRDLAL-----IYARSIGLDLPDDI------GHG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
L+ E+FE V E KL+QPTFV YP E+SPL++ + + + +RFEL + GRE+ANAFSE
Sbjct: 366 KLMMEIFEEVAEHKLIQPTFVTAYPTEVSPLSRKNDHNPDIVDRFELIVGGREIANAFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R QV EK K ++ Y +D+D++ ALEYG+
Sbjct: 426 LNDPVDQKERFLSQV-----------------AEKAKGDEEAHY---MDEDYIRALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP +G G+GIDRLVMLLT+SASIRDVI FP L+
Sbjct: 466 PPTAGEGIGIDRLVMLLTDSASIRDVILFPQLR 498
>gi|226324189|ref|ZP_03799707.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
gi|225207738|gb|EEG90092.1| lysine--tRNA ligase [Coprococcus comes ATCC 27758]
Length = 650
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/522 (44%), Positives = 333/522 (63%), Gaps = 40/522 (7%)
Query: 57 SDREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVS 115
D +R +R +K+ EL++ G P+ K+D TH + ++++ + L E HV
Sbjct: 14 QDLNHLRKVRREKLAELQANGQNPFEITKYDVTHHSQEVKDNFDEL--------EGKHVV 65
Query: 116 VAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMK 175
+AGR++++R GK +F ++D G IQ Y ++ + +++ K +DIGDI+G+ G +
Sbjct: 66 LAGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEEYKAFKK-MDIGDIVGLEGEVF 124
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
+T+ GE+S+ ++ +L+KSL LP+K+HGLT+ D RYRQRYVD+I PEV D F KR+K
Sbjct: 125 KTKTGEISIHASAVKLLSKSLQILPEKFHGLTNTDTRYRQRYVDLIMNPEVKDTFIKRSK 184
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
I++ IRK + + GF+EVETP+L AGGA ARPF T+ N+L DL LRI+ EL+LKR+++
Sbjct: 185 ILTAIRKYLGNEGFMEVETPMLVQNAGGAAARPFETHFNALNEDLKLRISLELYLKRLIV 244
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GG E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + A V G
Sbjct: 245 GGLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRFVAQEVLGTT 304
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
I Y+G+E+ L +P+ R TM + VK+ G+D+NE+ L+ A+E L
Sbjct: 305 QIVYKGIEMDLGKPFERITMVDAVKKYAGVDWNEV-ETLEQARE---------LAKAHNL 354
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E G++LN FE VE L+QPTFV+D+P+EISPL K + ERFE F+ G
Sbjct: 355 EFEERHKKGDILNLFFEEYVEEHLLQPTFVMDHPVEISPLTKKKPENPDYVERFEFFMNG 414
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
EMANA+SEL DP+DQR R + Q +E L + DD + T D+D
Sbjct: 415 WEMANAYSELNDPIDQRERFKAQ------------------EELLAQGDDEAN--TTDED 454
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE GMPP G+G GIDR+ MLLT + +IRDV+ FP +K
Sbjct: 455 FMNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMK 496
>gi|86157505|ref|YP_464290.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|123723269|sp|Q2IPX5.1|SYK_ANADE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|85774016|gb|ABC80853.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 513
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/531 (45%), Positives = 341/531 (64%), Gaps = 34/531 (6%)
Query: 55 STSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN--GEESNSEND 112
T++RE + A R+KK E LR+ G+ P+ W H A +E+ RH + EE
Sbjct: 6 GTTEREII-AQRLKKAEALRALGVNPFGNGWQPRHLA---EELLRHHGDQPAEEIAKAPG 61
Query: 113 HVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSG 172
S+AGRV+A R+FGK AFL +RD S +Q++ +K+R+ F+ K+ +DIGDI+G G
Sbjct: 62 DWSLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGDQAFEVFKL-LDIGDIVGAEG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
RT+ GEL++ +F ILTK+ PLP+K+HGLTDV++RYRQRYVD++ P V + F K
Sbjct: 121 PATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVK 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGA--AGGAEARPFVTYHNSLGRDLYLRIATELHL 290
RA+IVS IR+ +++ G++EVETP L AGGA ARPF T+HN+L DL LRIATELHL
Sbjct: 181 RARIVSGIRRFLDARGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDLKLRIATELHL 240
Query: 291 KRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALA 350
KR+++GG +++YEIGRI+RNEG+ RHNPEFT+IE Y+AY+ ++ +M +TEE++ A+
Sbjct: 241 KRLVVGGLDRVYEIGRIWRNEGIDRRHNPEFTSIEFYQAYATHEDLMRLTEELMHQLAVE 300
Query: 351 VNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLE 410
V G + +QG I L P+ R +M + A G+ ++ +A E RA +
Sbjct: 301 VTGGPVVTFQGQAIDLTPPYPRVSMLEVGARALGLAPDDALAGRGLA-EALSRAAAREND 359
Query: 411 NKDKFVIESSP--SVGNLLNEVFEIVVEPKLVQ--PTFVLDYPIEISPLAKPHRRHAGLT 466
++D + +E + + G + FEI EP+L + P FV+D+P+E SPL++ L
Sbjct: 360 SEDAWKLEQAAKKTPGEAVALAFEIFGEPQLPKDRPAFVVDFPLETSPLSRRRDADPRLV 419
Query: 467 ERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDH 526
+RFELF G E+ANAFSEL DP DQRAR E Q+R K++ E+
Sbjct: 420 DRFELFAAGMELANAFSELNDPADQRARFEAQMRA-----------KAAGDEE------- 461
Query: 527 SYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ D+DFV ALE+GMPP +G G+GIDRL ML T+SASIRDVI FP+LK
Sbjct: 462 --AMPYDEDFVRALEHGMPPTAGEGIGIDRLAMLFTDSASIRDVILFPLLK 510
>gi|254977178|ref|ZP_05273650.1| lysyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255094508|ref|ZP_05323986.1| lysyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255102764|ref|ZP_05331741.1| lysyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255308585|ref|ZP_05352756.1| lysyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|255316259|ref|ZP_05357842.1| lysyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255518920|ref|ZP_05386596.1| lysyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255652099|ref|ZP_05399001.1| lysyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|260685072|ref|YP_003216357.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
gi|260688730|ref|YP_003219864.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
gi|306521833|ref|ZP_07408180.1| lysyl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384362748|ref|YP_006200600.1| lysyl-tRNA synthetase [Clostridium difficile BI1]
gi|423089077|ref|ZP_17077443.1| lysine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|260211235|emb|CBA66755.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
gi|260214747|emb|CBE07437.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
gi|357558752|gb|EHJ40232.1| lysine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 509
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 335/538 (62%), Gaps = 50/538 (9%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANG 104
N++++ + D V +R K+++L+ G +P+ ++DRTH + +++ + L
Sbjct: 4 NQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMDIKDNFDSL--- 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
E +AGR++++R GK F+ ++D G IQ Y + + +++ + DI
Sbjct: 61 -----EGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTY-DI 114
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+G+ G + +T+KGE+SV S V+L KSL LP+KYHGL D + RYRQRYVD+I P
Sbjct: 115 GDIVGIEGEIFKTKKGEISVKAKSVVLLCKSLQVLPEKYHGLKDQELRYRQRYVDLIVNP 174
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV + F R K + +R ++ GF+EVETP+L AGGA ARPF+T HN+L +YLRI
Sbjct: 175 EVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIPMYLRI 234
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A EL+LKR+++GGF+K+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY MM ITE ++
Sbjct: 235 ANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAYADYTDMMEITENVI 294
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
H A G + ++YQG EI PW+R +M + VKE +G+DF+ + D L+VA+E
Sbjct: 295 AHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEYSGVDFSTINTDEEALEVAREKG 354
Query: 402 LRALGDGLENKDKFVIESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
IE P + G ++N FE E KL+QPTF+ +P+E+SPL+K +
Sbjct: 355 ---------------IEIKPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRN 399
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
T+RFE F E+ANAFSEL DP+DQ+ R +Q+R K
Sbjct: 400 VEDPRRTDRFEAFANKWELANAFSELNDPIDQKGRFIDQLR------------------K 441
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ DD ++E +D+DF+ ALE G+PP G+G+GIDR++MLLTNS SIRDV+ FP +K
Sbjct: 442 RELGDDEAFE--MDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMK 497
>gi|225620049|ref|YP_002721306.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
WA1]
gi|225214868|gb|ACN83602.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
WA1]
Length = 510
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/544 (41%), Positives = 346/544 (63%), Gaps = 43/544 (7%)
Query: 40 VSAGTRNRRASSSSTSTS-DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIY 98
+S N + + +TS ++ A + R +K+ LR G+ P+ +D T+ ++++ E +
Sbjct: 1 MSENQNNSENTQNEKNTSVEKNAEKENRREKLNTLRGMGINPFPNSYDVTYKSHEIAEKF 60
Query: 99 RHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ- 157
L E V++AGR++ R GK +FLT++D GTIQ Y +++++ D+F
Sbjct: 61 EELEKNE------TEVAIAGRIMLYRVMGKSSFLTIKDAEGTIQAYIQRDKV-GDEFYNT 113
Query: 158 -LKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQR 216
K +DIGDI+GV G++ +T+ GE+++ N +LTKSL PLP+K+HGLTD + RYRQR
Sbjct: 114 VFKKLIDIGDIVGVKGTVFKTKTGEITIYANELKLLTKSLNPLPEKFHGLTDTELRYRQR 173
Query: 217 YVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSL 276
YVD+I +V + F KR+K++S IR+ + F+EVETP++ GGA+A+PF+T+HN+L
Sbjct: 174 YVDLIMNDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKPFITHHNTL 233
Query: 277 GRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSM 336
LYLRIA EL+LKR+++GGF++++E+ R FRNEG+STRHNPEFT +E Y AY+++ +
Sbjct: 234 DMTLYLRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKV 293
Query: 337 MNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKV 396
M + EE+ + +NGK T Y+ EI + P+ R M +LVKE +G+DFN + +D
Sbjct: 294 MELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNAIQSD--- 350
Query: 397 AKETTLRALGDGLENKDKFVIESS---PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEIS 453
E +A G+E I++S PS ++ VFE VE KL+QPTFV++YP +S
Sbjct: 351 -DEALEKAKSVGVE------IDTSKTKPSKWEVMVAVFEEKVEEKLIQPTFVINYPKAVS 403
Query: 454 PLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEK 513
PL+K + + +TER+ELFI G EM+N FSEL DP+DQ+ R EEQ+ +A A E
Sbjct: 404 PLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQL------KAKARGED 457
Query: 514 SSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAF 573
+ + +D D++ ALEYG+PP G+G+GIDR+ +L N ASIRD I F
Sbjct: 458 ET--------------MDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNVASIRDTILF 503
Query: 574 PILK 577
P ++
Sbjct: 504 PQMR 507
>gi|336436162|ref|ZP_08615875.1| hypothetical protein HMPREF0988_01460 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008202|gb|EGN38221.1| hypothetical protein HMPREF0988_01460 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 654
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/523 (43%), Positives = 331/523 (63%), Gaps = 40/523 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D +R +R +K+ +L++ G +P+ K++++H + +++E + L E VS+
Sbjct: 12 DLNQLRKVRREKLADLQANGKDPFVITKYEQSHHSQEIKEHFEEL--------EGKQVSI 63
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++++R GK +F ++D G IQ Y ++ + + + K F D+GD++G+ G + R
Sbjct: 64 AGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSVGEEAYKDFKKF-DVGDVIGIKGEVFR 122
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ +L+KSL LP+K+HGLT+ D RYRQRYVD+I P+V D F KR+KI
Sbjct: 123 TKTGEMSIHAAEITLLSKSLQILPEKFHGLTNTDLRYRQRYVDLIMNPDVKDTFIKRSKI 182
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
+ IRK ++ GF+EVETP+L AGGA ARPF T+ N+L DL LRI+ EL+LKR+++G
Sbjct: 183 LRAIRKYLDGEGFMEVETPMLVANAGGAAARPFETHFNALDEDLKLRISLELYLKRLIVG 242
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM++TE + + A V G
Sbjct: 243 GMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRYVAQEVLGTTH 302
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I Y+G+EI L +P+ R TM + VK+ G+D+NE+ LK A+E L +
Sbjct: 303 IVYKGIEIDLGKPFERITMVDAVKKYAGVDWNEV-QTLKQARE---------LAKEHHVE 352
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++L FE E L+QPTFV+D+PIEISPL K + ERFE F+ G
Sbjct: 353 YEERHKKGDILALFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPENPEYVERFEFFMNGW 412
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R Q +E L + DD + T D+DF
Sbjct: 413 EMANAYSELNDPIDQRERFRAQ------------------EELLAQGDDEAN--TTDEDF 452
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
+ ALE GMPP G+G GIDR+ MLLT + +IRDV+ FP +K Q
Sbjct: 453 MNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKSQ 495
>gi|253702017|ref|YP_003023206.1| lysyl-tRNA synthetase [Geobacter sp. M21]
gi|251776867|gb|ACT19448.1| lysyl-tRNA synthetase [Geobacter sp. M21]
Length = 492
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/512 (44%), Positives = 321/512 (62%), Gaps = 34/512 (6%)
Query: 66 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRA 125
R +KV+ L G+ PY + H++ L+ Y + E +E VAGR++ RR+
Sbjct: 11 RRRKVDALWEAGINPYPNDYRPQHTSADLRAAY---GDKEVIEAEPQSFVVAGRILMRRS 67
Query: 126 FGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVL 185
FGK AF+ ++D G +QLY +K+ L + F + + + DIGDI+G +G+ RT+ GELS+
Sbjct: 68 FGKAAFVQVQDRKGRMQLYMKKDTLGEELFAEFENY-DIGDIIGATGTPFRTKTGELSLA 126
Query: 186 VNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVE 245
V +LTKSLLPLP+K+HGLTDV+ RYRQRYVD+I P+V +VF KR++++ IR +
Sbjct: 127 VTELRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRVIQLIRDFMT 186
Query: 246 SLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIG 305
F+EVETP++ GGA A+PF T+HN+L +L+LRIA EL+LKR+++GGFE+++EI
Sbjct: 187 KNDFLEVETPMMHPIPGGATAKPFATHHNALDMELFLRIAPELYLKRLVVGGFERVFEIN 246
Query: 306 RIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEIC 365
R FRNEG+S RHNPEFT +E Y+AY+ ++ +MN TEE++ H A + G L Y G I
Sbjct: 247 RNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLDFSYGGEPIS 306
Query: 366 LERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGN 425
+RPWRR T+ + E ID AK R L K + G
Sbjct: 307 FQRPWRRFTVKEAILEYGDID----------AKSLEDRDLAYAYSQKIGLELPEDVGYGK 356
Query: 426 LLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSEL 485
L+ E+FE V E KL+QPTF+ +YP E+SPL++ + +RFE F GREMANAFSEL
Sbjct: 357 LITEIFEEVAEVKLIQPTFITNYPTEVSPLSRKSDQDPEYVDRFEFFCAGREMANAFSEL 416
Query: 486 TDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMP 545
DP DQ+ R QV +A++K E + +D+D++ ALEYG+P
Sbjct: 417 NDPRDQKERFLAQV---------------AAKDKGDEEAHY-----MDEDYIRALEYGLP 456
Query: 546 PASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
P +G G+GIDRLVMLLT+S SIRDVI FP L+
Sbjct: 457 PTAGEGIGIDRLVMLLTDSPSIRDVILFPQLR 488
>gi|399924232|ref|ZP_10781590.1| lysyl-tRNA ligase [Peptoniphilus rhinitidis 1-13]
Length = 640
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/514 (47%), Positives = 345/514 (67%), Gaps = 41/514 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYK-WDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
L+ +K++EL+++G +P+ + +D T + ++E E + E VS+AGRV+++
Sbjct: 15 LKRRKLDELKNEGKDPFVNETYDVTAHSKDIKE--------EFNEDEEREVSIAGRVMSK 66
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK+ FL +RD GTIQ++ K+ +L D+++ +K +DIGDI+GV G + +TE GE++
Sbjct: 67 RRHGKICFLDVRDSVGTIQVFARKD-VLEDKYEDVKG-LDIGDIIGVKGIVFKTEAGEIT 124
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +L+KSL LP+K+HGL D D RYRQRYVD+I PEV DVF KR KI+ +IR+
Sbjct: 125 VRATDLTLLSKSLQILPEKFHGLKDPDLRYRQRYVDLIVNPEVKDVFIKRNKIIKKIREF 184
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EVETP+L AGGA ARPF T+HN+L D+ LRIA EL LKR+++GGF+K+YE
Sbjct: 185 LDNKGFLEVETPILGTVAGGANARPFYTHHNTLDIDMQLRIANELFLKRLIVGGFDKVYE 244
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+G++FRNEG+ +HNPEFT IE+Y+AY+DY+ MM ITE + + A V G TI+YQG E
Sbjct: 245 MGKMFRNEGMDPKHNPEFTNIELYQAYADYEEMMRITENLFEYVAKEVLGTDTINYQGTE 304
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
ICL+ PW+R TM + VK+ +DFNE+ D + A+E A GLE I +
Sbjct: 305 ICLKAPWKRITMIDAVKKYADVDFNEIDTD-EDAREV---AREKGLE------ISEHDTW 354
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G +L+E+FE E LV+PTFV+ +P+E+SPLAK + LT+RFE FI E ANAFS
Sbjct: 355 GKVLSEMFEEFCEEHLVEPTFVIGHPVEVSPLAKRNPEDKRLTQRFEAFINTWEFANAFS 414
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E QVR EK S DD ++ +D DF+ A+E G
Sbjct: 415 ELNDPIDQRERFEAQVR-----------EKESG-------DDEAH--PMDSDFINAIEVG 454
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+PP G+G+G+DR+++LLT+ SIRDV+ FP +K
Sbjct: 455 LPPTGGLGIGVDRMIVLLTDQPSIRDVLLFPTMK 488
>gi|225389818|ref|ZP_03759542.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
DSM 15981]
gi|225044128|gb|EEG54374.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
DSM 15981]
Length = 647
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/521 (45%), Positives = 328/521 (62%), Gaps = 40/521 (7%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSV 116
D V +R +K+ EL++ G +P+ K+D T + ++E Y E VSV
Sbjct: 10 DLNHVLKVRREKLAELQAAGRDPFEITKYDVTAHSTDVKEHYEEW--------EGKEVSV 61
Query: 117 AGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKR 176
AGR++ +R GK +F ++D G+IQ+Y ++ + +++ K +DIGDI+GV G++
Sbjct: 62 AGRMMFKRVMGKASFCNVQDLKGSIQIYVARDNIGEEEYKGFKK-MDIGDIIGVKGTVFT 120
Query: 177 TEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKI 236
T+ GE+S+ +L+KSL LP+K+HGLTD D RYRQRYVD+I EV D F KR+KI
Sbjct: 121 TKAGEISIHATELTLLSKSLQVLPEKFHGLTDTDMRYRQRYVDLIMNAEVKDTFVKRSKI 180
Query: 237 VSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIG 296
++ IRK + S F+EVETP+L AGGA ARPF T+ N+L DL LRI+ EL+LKR+++G
Sbjct: 181 IAAIRKYLSSQNFMEVETPMLVSNAGGAAARPFETHFNALDEDLKLRISLELYLKRLIVG 240
Query: 297 GFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLT 356
G E++YEIGR+FRNEGL TRHNPEFT +E+Y+AY+DY MM +TE + + A V G T
Sbjct: 241 GLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMELTENLYRYVAQEVLGTTT 300
Query: 357 IDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFV 416
I Y+GVE+ L +P+ R TM + VK+ G+DF++ +K +E A G+E
Sbjct: 301 ITYKGVEMDLSKPFERITMVDAVKKYAGVDFDQ----IKTLEEARAVAKEKGVE------ 350
Query: 417 IESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
E G++L+ FE E L+QPTFVLD+P+EISPL K + ERFE F+ G
Sbjct: 351 FEPRHKKGDILSLFFEEFAEEHLIQPTFVLDHPVEISPLTKKKPGNPDFVERFEFFMNGW 410
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SE+ DP+DQR R AQE+L D T D+DF
Sbjct: 411 EMANAYSEINDPIDQRERFR-------------------AQEELLAQGDEEANHT-DEDF 450
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+VMLLT+SA+IRDV+ FP +K
Sbjct: 451 LNALEIGMPPTGGIGYGIDRMVMLLTDSAAIRDVLLFPTMK 491
>gi|169335601|ref|ZP_02862794.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
17244]
gi|169258339|gb|EDS72305.1| lysine--tRNA ligase [Anaerofustis stercorihominis DSM 17244]
Length = 491
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 326/516 (63%), Gaps = 38/516 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
V +RI K EL + G Y YK R ++I N + E V +AGR++
Sbjct: 11 VVKVRIDKFNELTNDG--KYPYKESRFEYNAYCKDI-----NEKFEEYEGKKVKLAGRLM 63
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK+ F L D SG IQL+ +K+ + D++ +K + DIGDILGV G + +T++G+
Sbjct: 64 SKRGQGKVGFYDLMDSSGRIQLFIKKDVVGEDEYALIKAY-DIGDILGVDGEVFKTQRGQ 122
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+SV V ++L+KS+ LP+K+HGL D + RYRQRYVD+I PEV DVF R+KIV +R
Sbjct: 123 ISVRVEKVILLSKSIQVLPEKFHGLKDPELRYRQRYVDLIMNPEVKDVFLMRSKIVKCMR 182
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
++ GFVEVETPVL AGGA ARPF+T+HN+L +Y+RIATEL LKR+++GGF+K+
Sbjct: 183 DFMDGEGFVEVETPVLGTLAGGANARPFITHHNTLDIPMYMRIATELPLKRLVVGGFDKV 242
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEIGRIFRNEG+ HNPEFTT+E Y+AY+D+ +MN++E++ + A G ++++
Sbjct: 243 YEIGRIFRNEGMDATHNPEFTTMESYQAYADFNDVMNMSEKMYEYIASKTLGTTSVEFGD 302
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L+ P+RR M +L+ E TG+DF+++ D++VA+E K V E
Sbjct: 303 NEISLKAPFRRVKMVDLITEETGVDFDKI-TDIEVAREEA---------KKLNVVPEEEW 352
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+G ++ EVFE E KL+QPTFV +P+EISPLAK T+RFELFI G E N
Sbjct: 353 GIGKIIEEVFEEHCEAKLIQPTFVTHHPVEISPLAKKCMDDDRYTQRFELFIAGHEYCNG 412
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP DQR R Q+ EK+A E H Y D DF+ ALE
Sbjct: 413 FSELNDPFDQRERFAAQM----EKKATGDDEA------------HPY----DTDFINALE 452
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G G+DRLVMLLTN +SIRDVI FP +K
Sbjct: 453 VGLPPTGGVGFGVDRLVMLLTNQSSIRDVILFPTMK 488
>gi|408419456|ref|YP_006760870.1| lysyl-tRNA synthetase LysS [Desulfobacula toluolica Tol2]
gi|405106669|emb|CCK80166.1| LysS: lysyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 493
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/517 (43%), Positives = 335/517 (64%), Gaps = 41/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
LR +K+ EL+ G+ Y + + S +L++ N + E D +AGR++A
Sbjct: 10 LRKEKINELKDNGINLYPNDFKPSCSIKELKKFTEE--NPDSLGEEGDQFQMAGRMMAIN 67
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK +F+ +D S +Q+Y ++ R+ + + K +DIGD +GV G + +T GE ++
Sbjct: 68 KMGKSSFVRFKDGSDQLQVYLQQNRVGDETYSLFKK-LDIGDFIGVKGPLFKTRTGEWTL 126
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L + F +L+K++ PLP+K+HG+ D +KRYRQRY+D++ + +F KR++IV+ +R+
Sbjct: 127 LADKFRLLSKAVRPLPEKFHGIKDPEKRYRQRYLDLVMNEDTRQIFIKRSQIVASMRRFF 186
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
E GF+EVETP++Q AGGAEA PF T+HN+LG +L+LRIA EL+LKR+++GGFEK++EI
Sbjct: 187 EEKGFMEVETPMMQPLAGGAEATPFKTWHNALGMELFLRIAPELYLKRLVVGGFEKVFEI 246
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+STRHNPEFT +E Y+AY+DY+ +M++TEE+ A V+G T+DYQG I
Sbjct: 247 NRNFRNEGVSTRHNPEFTMVEFYQAYADYEQLMDMTEEMFESIAQQVSGSTTVDYQGQSI 306
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGND----LKVAKETTLRALGDGLENKDKFVIESS 420
++ W+R M + + GID E+ +D LK A++ ++ + KD+
Sbjct: 307 DFKKGWQRIPMIESLTKIGGID-PEIIDDTQALLKFAQDNNIQ-----ITKKDRH----- 355
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G +L ++F+I+VEPKL+QPTF+ YP+E+SPL++ + LT+RFELFI GRE+AN
Sbjct: 356 ---GKILTKLFDILVEPKLIQPTFITGYPVEVSPLSRKSEDNPELTDRFELFIAGREIAN 412
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
FSE+ DP DQ R QV+Q +E + A H +D ++V AL
Sbjct: 413 GFSEINDPEDQHNRFLMQVQQRDEGNSEA----------------H----IMDSEYVEAL 452
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP +G G+GIDRLVMLLTNSASIR+VI FP +K
Sbjct: 453 EYGMPPTAGEGIGIDRLVMLLTNSASIREVILFPHMK 489
>gi|401683540|ref|ZP_10815426.1| lysine--tRNA ligase [Streptococcus sp. BS35b]
gi|418974727|ref|ZP_13522636.1| lysine--tRNA ligase [Streptococcus oralis SK1074]
gi|383348098|gb|EID26057.1| lysine--tRNA ligase [Streptococcus oralis SK1074]
gi|400187618|gb|EJO21812.1| lysine--tRNA ligase [Streptococcus sp. BS35b]
Length = 496
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/514 (43%), Positives = 333/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V++R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA A+PF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGHDFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIALELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT IE+Y+AY+D+ +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKETTGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NA+SE
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAYSE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|262065895|ref|ZP_06025507.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291380375|gb|EFE87893.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 493
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/523 (43%), Positives = 340/523 (65%), Gaps = 44/523 (8%)
Query: 58 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVA 117
++E + A R KK+EEL S G++ + K+D+ + +I +H + EN A
Sbjct: 9 EKEPLIAERWKKIEELESNGIKAFGSKYDKQ---IMIGDILKH------NPEENLKFKTA 59
Query: 118 GRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRT 177
GR+++ R GK+ F + D SG IQ+Y +K+ L +FD + +++GDI+GV G + T
Sbjct: 60 GRIMSLRGKGKVYFAHIEDQSGKIQVYIKKDELGEAEFDHIVKMLNVGDIIGVEGELFIT 119
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD+I P+V F KR +I+
Sbjct: 120 HTEELTLRVKSISLLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRSTFIKRTQII 179
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+RK ++ GF+EVETP++ GGA A+PFVT+HN+L DL+LRIA EL+LK++++GG
Sbjct: 180 KAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPELYLKKLIVGG 239
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FE++YE+GR FRNEG+STRHNPEFT IE+Y++++++ MM++ E I++ VNG I
Sbjct: 240 FERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDI 299
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDK 414
+Y GV++ L + ++R M +++K+ TG+DF + K+AKE +
Sbjct: 300 EYDGVQLSL-KNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVE----------- 347
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V + SVG+++NE FE E ++VQPTFV +P+EISPLAK + ++ T+RFELFI
Sbjct: 348 -VADHMDSVGHIINEFFEQKCEERVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAF+EL DP DQR R E QV +E ++ +++ + E+ D+
Sbjct: 407 KREYANAFTELNDPADQRGRFEAQV-----------------EEAMRGNEEATPEI--DE 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
FV ALEYG+PP GMG+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 448 SFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|164686646|ref|ZP_02210674.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
16795]
gi|164604375|gb|EDQ97840.1| lysine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 507
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/522 (44%), Positives = 328/522 (62%), Gaps = 50/522 (9%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
V +R +K++ L G P+ K+D T + +++ N E EN V +AGR+
Sbjct: 18 VLKVRREKLQNLIDMGRNPFEQTKYDVTDHSMHIKD------NFEAKEGEN--VKIAGRI 69
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK F+ ++D G IQ Y K+ + +++ K + DIGDI+GV G++ +T+K
Sbjct: 70 MSKRIQGKAGFIDIQDSEGRIQCYVRKDAIGEEEYPVFKTY-DIGDIIGVEGTVFKTKKE 128
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
E+SV S V+L+KSL LP+KYHGL DVD RYRQRYVD+I PEV F R K + +
Sbjct: 129 EISVKATSVVLLSKSLQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKQAFLTRTKALKAL 188
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R ++ GF+EVETP+L AGGA ARPF+T+HN+L +YLRIA EL+LKR+++GGF+K
Sbjct: 189 RSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPMYLRIANELYLKRLIVGGFDK 248
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+GR+FRNEG+ HNPE+T IEMY+AY+D+ MM +TE ++ H A G +++Q
Sbjct: 249 VYEMGRMFRNEGMDVNHNPEYTAIEMYQAYADFNDMMELTENVIAHMAEVATGSTVVNFQ 308
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVI 417
G EI + PW+R TM VKE +G+DF+ + D L VA+E I
Sbjct: 309 GTEIDFKPPWKRMTMIECVKEYSGVDFDTIETDEEALAVAREKG---------------I 353
Query: 418 ESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
E +P + G ++N FE E KL+QPTF+ +P+E+SPLAK + T+RFE F
Sbjct: 354 EITPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLAKRNAEDPRKTDRFEAFANK 413
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
E+ANAFSEL DP+DQ+ R +Q+R K + DD + + +D+D
Sbjct: 414 WELANAFSELNDPIDQKERFMDQLR------------------KKELGDDEACD--MDED 453
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+ ALE G+PP G+G+GIDR++MLLTNSASIRDVI FP +K
Sbjct: 454 FINALEVGLPPTGGLGIGIDRVMMLLTNSASIRDVILFPTMK 495
>gi|227528916|ref|ZP_03958965.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
gi|227351190|gb|EEJ41481.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
Length = 507
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/518 (44%), Positives = 331/518 (63%), Gaps = 35/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+ G+EP+ ++ R H A L + Y + EE + + V +AGR+ +R
Sbjct: 10 VRREKMEELKEAGIEPFGRRFKRDHLAQDLHDKYDQF-DKEELSEKGQMVIIAGRMTRKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK F D +G IQ+Y K+ ++ D+ + DIGD LG+ G + +T+ GEL+V
Sbjct: 69 SSGKAGFADFVDRTGKIQVYARKD-MVGDEPYHIFKRADIGDFLGIEGDVIKTDTGELTV 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ L+K+L PLP+K+ G+TD + YRQRY+D+IS PE F +R I+ +R+ +
Sbjct: 128 RAHKITFLSKALRPLPNKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRRYM 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF EVETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++GGFE++YE+
Sbjct: 188 DEHGFTEVETPILNTQAGGANARPFITHHNALDIDMYLRIATELYLKRLIVGGFERVYEL 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTT+E Y AY D++ +M+ TE IV A V+ + YQG EI
Sbjct: 248 GRIFRNEGMDPHHNPEFTTMETYAAYFDFRDVMDETEGIVKAAAKVVSDDGKVTYQGHEI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP--S 422
L ++R TM + VKE TGIDF++ AK+ D+ +E P +
Sbjct: 308 DLGGDFKRITMVDAVKEKTGIDFSDESMTDDDAKKLA-----------DEHKVEYKPYWT 356
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LN FE VE L+QPTFV +YP+E+SPLAK ++ + +T+RFEL++ G E+ANAF
Sbjct: 357 KGHILNAFFEEFVEDTLIQPTFVYEYPVEVSPLAKRNKENPAMTDRFELYVDGSELANAF 416
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R E Q A+EK +D+ +D D+V ALEY
Sbjct: 417 SELNDPIDQKERFEMQ-----------------AKEKANGNDEAE---PVDLDYVEALEY 456
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLT++ SIRDVI FP ++ ++
Sbjct: 457 GMPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMRPEK 494
>gi|381336006|ref|YP_005173781.1| lysyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356643972|gb|AET29815.1| lysyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 495
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/500 (45%), Positives = 327/500 (65%), Gaps = 33/500 (6%)
Query: 78 LEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDD 137
L+P+ +++RT A +L +Y + E N++++ V +AGR+VA+R GK+ F RD
Sbjct: 27 LDPFGKRFERTAKAQELHNLYDASSLEELENAKHE-VVIAGRMVAKRGAGKVIFADFRDV 85
Query: 138 SGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLL 197
SG IQ+Y ++ L +D + +K D+GD LG+ G M +TE GEL+VL L+K+L
Sbjct: 86 SGKIQVYARRDDL-ADNYPIIKR-ADLGDFLGIKGIMMKTEAGELTVLATELTHLSKALR 143
Query: 198 PLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 257
P+PDK+HG++DV+ RYR+RY+D+I+ + F++R+ I+S IR ++ F+EVETP+L
Sbjct: 144 PMPDKFHGISDVETRYRKRYLDLIANEDSFKKFQERSHIISAIRAYMDRNDFLEVETPIL 203
Query: 258 QGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRH 317
Q AGGA ARPF+T+HN+L D+Y+RIATEL+LKR+++GG E++YEIGRIFRNEG+ +H
Sbjct: 204 QTEAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVGGMERVYEIGRIFRNEGMDPKH 263
Query: 318 NPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHN 377
NPEFTT+E Y AY D+ +M+ TE I A V+ L I YQG EI L + R+ + +
Sbjct: 264 NPEFTTMESYAAYMDFTDVMDETEGIFKAAASVVSDDLKITYQGTEIDLGTKFARKHLVD 323
Query: 378 LVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVGNLLNEVFEIVVEP 437
L+KE TGIDF +E ++ A L + + E VG+++N FE VE
Sbjct: 324 LIKEQTGIDF---------WQEMSVEA-AQKLADDNHVKYEKYWGVGHIINAFFEEFVED 373
Query: 438 KLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEE 497
LVQPTFV +P+E+SPLAK + T+RFELFI G E ANAF+EL DP+DQRAR E
Sbjct: 374 TLVQPTFVYGHPVEVSPLAKKNTDDPRFTDRFELFIMGSEYANAFTELNDPIDQRARFEA 433
Query: 498 QVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRL 557
Q +E+ + ++ + +D+DF+ ALEYGMPP G+G+GIDRL
Sbjct: 434 Q-----------AAERENGNDEAE---------GIDEDFIEALEYGMPPTGGLGVGIDRL 473
Query: 558 VMLLTNSASIRDVIAFPILK 577
VMLLT+S +IRDV+ FP ++
Sbjct: 474 VMLLTDSDTIRDVVLFPTMR 493
>gi|423080863|ref|ZP_17069478.1| lysine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423087599|ref|ZP_17075986.1| lysine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357544632|gb|EHJ26634.1| lysine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357551943|gb|EHJ33722.1| lysine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 509
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 335/538 (62%), Gaps = 50/538 (9%)
Query: 46 NRRASSSSTSTSDREAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANG 104
N++++ + D V +R K+++L+ G +P+ ++DRTH + +++ + L
Sbjct: 4 NQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMDIKDNFDSL--- 60
Query: 105 EESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI 164
E +AGR++++R GK F+ ++D G IQ Y + + +++ + DI
Sbjct: 61 -----EGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTY-DI 114
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDI+G+ G + +T+KGE+SV S V+L KSL LP+KYHGL D + RYRQRYVD+I P
Sbjct: 115 GDIVGIEGEIFKTKKGEISVKAKSVVLLCKSLQVLPEKYHGLKDQELRYRQRYVDLIVNP 174
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
EV + F R K + +R ++ GF+EVETP+L AGGA ARPF+T HN+L +YLRI
Sbjct: 175 EVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIPMYLRI 234
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
A EL+LKR+++GGF+K+YE+GR+FRNEG+ +HNPE+T IE+Y+AY+DY MM ITE ++
Sbjct: 235 ANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAYADYTDMMEITENVI 294
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETT 401
H A G + ++YQG EI PW+R +M + VKE +G+DF+ + D L+VA+E
Sbjct: 295 AHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEYSGVDFSTINTDEEALEVAREKG 354
Query: 402 LRALGDGLENKDKFVIESSPSV--GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPH 459
IE P + G ++N FE E KL+QPTF+ +P+E+SPL+K +
Sbjct: 355 ---------------IEIKPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRN 399
Query: 460 RRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEK 519
T+RFE F E+ANAFSEL DP+DQ+ R +Q+R K
Sbjct: 400 VEDPRRTDRFEAFANKWELANAFSELNDPIDQKGRFIDQLR------------------K 441
Query: 520 LKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ DD ++E +D+DF+ ALE G+PP G+G+GIDR++MLLTNS SIRDV+ FP +K
Sbjct: 442 RELGDDEAFE--MDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMK 497
>gi|336394552|ref|ZP_08575951.1| lysyl-tRNA synthetase [Lactobacillus farciminis KCTC 3681]
Length = 516
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/520 (43%), Positives = 335/520 (64%), Gaps = 46/520 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNS--ENDHVS--VAGRV 120
+R +K++EL +G++P+ +++RT A ++ + Y G+ES E + +AGR+
Sbjct: 27 VRREKLQELYDEGVDPFGSRFERTALAQEIHDKY-----GDESKEVLEEQELPCVIAGRM 81
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK+ F LRD SG IQ+Y K+ + + + K DIGD LG+ G + +T+ G
Sbjct: 82 MSKRGKGKVGFADLRDRSGRIQIYVRKDEVGEENYHIFKR-ADIGDHLGIHGEIMKTDMG 140
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
EL+V +L+KSL PLPDK+HGLT+V++ YRQRY+D+I+ + D F+KR KI+S +
Sbjct: 141 ELTVKATHVTMLSKSLRPLPDKFHGLTNVEQIYRQRYLDLIANQDSFDRFKKRTKIISAV 200
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R+ +++ GF+ VETPVL AGGA ARPF+T+HN+L ++YLRIA EL LKR+++GGFE+
Sbjct: 201 REYLDNEGFLSVETPVLNTQAGGASARPFITHHNALDMEMYLRIALELPLKRLIVGGFER 260
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YEIGR FRNEGL T+HNPEFT++E Y AY D +M E I H A NG + YQ
Sbjct: 261 VYEIGRAFRNEGLDTQHNPEFTSLETYAAYWDMTDVMKEVEGIFRHAAQKANGTQIVTYQ 320
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNE---LGNDLKVAKETTLRALGDGLENKDKFVI 417
G EI L +P+RR M + +KE TG+DF++ L K+A E +
Sbjct: 321 GEEIDLSKPFRRLKMVDAIKEQTGVDFSQDMTLEEARKIADEKGVH-------------Y 367
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
E+ VG+++ E FE VE L +PTF+ +YP+E+SPLAK ++ + T+RFE++I G E
Sbjct: 368 ENFWGVGHIIAEFFEEFVEDTLKEPTFIYEYPLEVSPLAKKNKENPNFTDRFEVYILGHE 427
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
NAF+EL DP+DQ+ R E Q A+E+ +D+ + +D+D+V
Sbjct: 428 YGNAFTELNDPIDQKERFEAQ-----------------AKERENGNDEAEH---IDNDYV 467
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
A+EYGMPP G+G+GIDRLVMLLT++ SIRDVI FP ++
Sbjct: 468 EAMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVILFPTMR 507
>gi|357236210|ref|ZP_09123553.1| lysine--tRNA ligase [Streptococcus criceti HS-6]
gi|356884192|gb|EHI74392.1| lysine--tRNA ligase [Streptococcus criceti HS-6]
Length = 496
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/514 (43%), Positives = 331/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L G++P+ +++RT ++ +L+ Y + EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALSEMGIDPFGKRFERTANSAELKAKYDDKSK-EELHKLNETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + + K DIGD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDAVGEENYQIFKK-ADIGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ +YR+RY+D+I+ + + F R++I+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETKYRKRYLDLITNRDSFERFVTRSQIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+SLGF+EVETPVL AGGA A+PF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DSLGFLEVETPVLHNEAGGAAAKPFITHHNAQDMDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT+IE+Y+AY+D+ +M++TE I+ H A +V G + YQ EI
Sbjct: 253 GRIFRNEGMDATHNPEFTSIEVYQAYADFNDIMDLTEGIIQHAAKSVKGDAAVIYQDTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS-PSV 423
+ P++R M + +KE TG+DF +E +L L K +E+ SV
Sbjct: 313 KINEPFKRVHMVDAIKEVTGVDF---------WQEMSLEE-AQALARKKNVPLENHFTSV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI E NAF+
Sbjct: 363 GHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNTDDPRFTDRFELFIMANEYGNAFT 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ R + Q AA E DD + +D D++ ALEYG
Sbjct: 423 ELNDPIDQLERFKAQ---------AAAKEL---------GDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDVLLFPTMK 496
>gi|402311678|ref|ZP_10830615.1| lysine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400371326|gb|EJP24287.1| lysine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 646
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/529 (44%), Positives = 335/529 (63%), Gaps = 40/529 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESN 108
S+ +T D + R K+ EL++ +P+ K+D + +++ + L
Sbjct: 4 SNEPMTTEDLNHILKARRDKLAELQAANNDPFFITKYDVEKHSADIKDNFEEL------- 56
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V +AGR++++R GK +F ++D G IQ Y ++ + D++ K +DIGDI+
Sbjct: 57 -DGKSVKIAGRLMSKRVMGKASFCHVQDLKGRIQAYVARDSVGEDEYKAFKK-LDIGDIV 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV+G + +T+ GE+S+ +L+KSL PLP+K+HGLTD D RYRQRYVD+I +V D
Sbjct: 115 GVTGEVFKTQTGEISLHATKVELLSKSLKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKD 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI++EIRK ++ GF+EVETP+L AGGA ARPF T+ N+L D+ LRI+ EL
Sbjct: 175 TFIKRSKIITEIRKFLDGQGFIEVETPMLVSNAGGAAARPFNTHFNALNEDVKLRISLEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + + A
Sbjct: 235 YLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRYLA 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y I L +P+ R TM +K+ +GIDF+ ++ +E A G
Sbjct: 295 EKVCGTTTIPYAEAMIDLGKPFERITMVEAIKKYSGIDFDS----IETTEEAKALAKEKG 350
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E E S G+++N FE VE KL+QPTFV+D+PIE+SPL K ER
Sbjct: 351 IE------FEERHSRGDIINLFFEEFVEEKLIQPTFVMDHPIEVSPLTKKKPSDPRYVER 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANA+SEL DP+DQR R + Q E+ AA E++ +H+
Sbjct: 405 FELFIYGREMANAYSELNDPIDQRERFQAQ-----EEAFAAGDEEA----------NHT- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 449 ----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 493
>gi|404483330|ref|ZP_11018553.1| lysine-tRNA ligase [Clostridiales bacterium OBRC5-5]
gi|404343603|gb|EJZ69964.1| lysine-tRNA ligase [Clostridiales bacterium OBRC5-5]
Length = 649
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/529 (44%), Positives = 335/529 (63%), Gaps = 40/529 (7%)
Query: 50 SSSSTSTSDREAVRALRIKKVEELRSKGLEPY-AYKWDRTHSANQLQEIYRHLANGEESN 108
S+ +T D + R K+ EL++ +P+ K+D + +++ + L
Sbjct: 4 SNEPMTTEDLNHILKARRDKLAELQAANNDPFFITKYDVEKHSADIKDNFEEL------- 56
Query: 109 SENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDIL 168
+ V +AGR++++R GK +F ++D G IQ Y ++ + D++ K +DIGDI+
Sbjct: 57 -DGKSVKIAGRLMSKRVMGKASFCHVQDLKGRIQAYVARDSVGEDEYKAFKK-LDIGDIV 114
Query: 169 GVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVAD 228
GV+G + +T+ GE+S+ +L+KSL PLP+K+HGLTD D RYRQRYVD+I +V D
Sbjct: 115 GVTGEVFKTQTGEISLHATKVELLSKSLKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKD 174
Query: 229 VFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL 288
F KR+KI++EIRK ++ GF+EVETP+L AGGA ARPF T+ N+L D+ LRI+ EL
Sbjct: 175 TFIKRSKIITEIRKFLDGQGFIEVETPMLVSNAGGAAARPFNTHFNALNEDVKLRISLEL 234
Query: 289 HLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCA 348
+LKR+++GG E++YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM++TE + + A
Sbjct: 235 YLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRYLA 294
Query: 349 LAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDG 408
V G TI Y I L +P+ R TM +K+ +GIDF+ ++ +E A G
Sbjct: 295 EKVCGTTTIPYAEAMIDLGKPFERITMVEAIKKYSGIDFDS----IETTEEAKALAKEKG 350
Query: 409 LENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTER 468
+E E S G+++N FE VE KL+QPTFV+D+PIE+SPL K ER
Sbjct: 351 IE------FEERHSRGDIINLFFEEFVEEKLIQPTFVMDHPIEVSPLTKKKPSDPRYVER 404
Query: 469 FELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSY 528
FELFI GREMANA+SEL DP+DQR R + Q E+ AA E++ +H+
Sbjct: 405 FELFIYGREMANAYSELNDPIDQRERFQAQ-----EEAFAAGDEEA----------NHT- 448
Query: 529 EVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G GIDRLVMLLTNS +IRDV+ FP +K
Sbjct: 449 ----DEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMK 493
>gi|167745533|ref|ZP_02417660.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
gi|167655254|gb|EDR99383.1| lysine--tRNA ligase [Anaerostipes caccae DSM 14662]
Length = 637
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/521 (45%), Positives = 329/521 (63%), Gaps = 45/521 (8%)
Query: 60 EAVRALRIKKVEELRSKGLEPYA-YKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAG 118
E VR R K+EEL+S G P+ K+D TH + ++++ + L E VSVAG
Sbjct: 10 ELVRVRR-NKLEELQSAGKNPFEIMKYDTTHHSMEIKDHFEEL--------EGKEVSVAG 60
Query: 119 RVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTE 178
R++ +R GK +F ++D G IQ Y ++ + +++ K +DIGDI+G+ G++ T+
Sbjct: 61 RMMFKRVMGKASFCNIQDLEGRIQAYVARDEIGVEEYKDFKK-MDIGDIIGIKGTVFVTK 119
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
GE S+ V+L+KSL PLP+K+HGL D D RYRQRYVD+I E F KR+KI+S
Sbjct: 120 TGEKSIHAKEVVLLSKSLKPLPEKFHGLKDTDARYRQRYVDLIMNEESKGTFIKRSKIIS 179
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
+IR ++ GF+EVETP+L AGGA ARPF T++N+L D+ LRI+ EL+LKR+++GG
Sbjct: 180 KIRSFLDGQGFMEVETPMLVPNAGGAAARPFETHYNALDEDVKLRISLELYLKRLIVGGL 239
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
EK+YEIGR+FRNEG+ TRHNPEFT +E+Y+AY+DY MM +TE + + A V G TI
Sbjct: 240 EKVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYNGMMELTENLYRYLAQEVVGSTTIT 299
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
Y G+E+ L +P+ + TM + VK+ G+DF+E + + D + D+ +E
Sbjct: 300 YNGIEMDLGKPFEKITMVDAVKKYAGVDFDE------------IHTVEDARKAADEHHVE 347
Query: 419 SSP--SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGR 476
G++LN FE VE KLVQPTFVLD+P+EISPL K + ERFE F+ G
Sbjct: 348 YEERHKKGDILNLFFEEFVEDKLVQPTFVLDHPVEISPLTKKKPENPDYVERFEFFMNGW 407
Query: 477 EMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDF 536
EMANA+SEL DP+DQR R + AQE+L D T D+DF
Sbjct: 408 EMANAYSELNDPIDQRERFK-------------------AQEELLAQGDEEANST-DEDF 447
Query: 537 VTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+ ALE GMPP G+G GIDR+VMLLT+S++IRDV+ FP +K
Sbjct: 448 LNALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLFPTMK 488
>gi|310829432|ref|YP_003961789.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308741166|gb|ADO38826.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
Length = 488
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/517 (44%), Positives = 336/517 (64%), Gaps = 42/517 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAY-KWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRV 120
V A+R +K+++L+ +G P+ ++D T A+ + E + E VS+AGR+
Sbjct: 9 VLAVRREKLKKLQEEGKNPFEMTRYDVTAYADDVNENFEAY--------EEKPVSMAGRI 60
Query: 121 VARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKG 180
+++R GK+ F L+D +G IQ++ +K+ L + +D++K + DIGDI+G+ G + +T+KG
Sbjct: 61 MSKRGQGKVGFYDLQDSTGKIQMFLKKDLL--ENYDEIKTY-DIGDIVGIKGEVFKTQKG 117
Query: 181 ELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEI 240
++SV V +L+KSL LP+KYHGL D + RYRQRYVD+I PEV +VF R++I+ +I
Sbjct: 118 QISVRVKELTLLSKSLQILPEKYHGLKDTELRYRQRYVDLIVNPEVKNVFILRSQIIRKI 177
Query: 241 RKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEK 300
R+ +++ GF+EVETPVL AGGA ARPFVT+HN+L LY+RIA EL LKR+++GGF+K
Sbjct: 178 REFLDNRGFIEVETPVLYNLAGGANARPFVTHHNALDIPLYMRIALELPLKRLIVGGFDK 237
Query: 301 IYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQ 360
+YE+ R+FRNEG+ HNPEFT +E YEAY+DY +MN+ E + A + G T++Y+
Sbjct: 238 VYELSRVFRNEGMDATHNPEFTLLETYEAYADYDDVMNMVEALYGFLAKEILGTDTVEYE 297
Query: 361 GVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESS 420
G +I L P++R M +LV+E TG++F+ + DL A+E + D +E
Sbjct: 298 GHDISLAAPFKRARMVDLVEEHTGVNFDVM-TDLAEAQEAAKKLHVD---------VEDK 347
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
S+G ++ EVF+ VE KL+QPTFV +P+EISPL+K T+RFELFI G E AN
Sbjct: 348 HSIGEIIAEVFDEYVEDKLIQPTFVTMHPVEISPLSKREPTDPRYTQRFELFINGAECAN 407
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AFSEL DP+DQ+ R E QV +K + DD ++ D DF+ AL
Sbjct: 408 AFSELNDPIDQKGRFEAQV------------------QKKADGDDEAH--PYDADFINAL 447
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
E G+PP G+G+GIDRLVML T SIRDVI FP +K
Sbjct: 448 EVGLPPTGGLGIGIDRLVMLFTGQHSIRDVILFPTMK 484
>gi|313895695|ref|ZP_07829251.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975821|gb|EFR41280.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 503
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/530 (45%), Positives = 333/530 (62%), Gaps = 35/530 (6%)
Query: 48 RASSSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEES 107
RA + D + +R +K++ R G+ P+ ++++ T A Q++ Y L
Sbjct: 5 RAQMAEVQEQDLNEMMRVRREKMDAFREMGVAPFGHRFEVTDYAAQIRAQYDGLG----E 60
Query: 108 NSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDI 167
+ E V +AGR++A R GK +F TL D +G IQ+Y +++ L ++ + +DIGDI
Sbjct: 61 DEEGGEVRIAGRLMAIRGHGKASFSTLNDRTGNIQIYFKQDVLGEKKYKEEFKRLDIGDI 120
Query: 168 LGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVA 227
+G+ G + +T +GE++V V F +L+KSL PLP+K+HGL DVD RYRQRY+D++ EV
Sbjct: 121 IGICGVVFKTRRGEVTVRVEDFDLLSKSLRPLPEKFHGLKDVDTRYRQRYLDLMVNYEVR 180
Query: 228 DVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATE 287
D FRKRAKI+ IR ++ F+EVETPVL AGGA ARPF+T+HN+L DLYLRIATE
Sbjct: 181 DTFRKRAKIIRSIRSYLDERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLYLRIATE 240
Query: 288 LHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHC 347
L LKR+++GG +++YE+GRIFRNEG+ RHNPEFT+IE+Y+A+ DY+ +M ITE IV
Sbjct: 241 LSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNPEFTSIEIYQAFGDYRDLMEITEGIVRRT 300
Query: 348 ALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGD 407
A V G I YQGVEI L R +M++ V EATG DF L RA+
Sbjct: 301 AEDVLGTTKITYQGVEIDLG-TVRTVSMNDAVCEATGRDF------LSCTTVDEARAMAK 353
Query: 408 GLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTE 467
+ E +G +LN FE VE L+QPTF+ +P EISPLAK + +T+
Sbjct: 354 EI----GVPFEERHGIGGILNAAFEEKVEETLIQPTFITGHPTEISPLAKRNPDDPRITD 409
Query: 468 RFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHS 527
RFE F+ GRE+AN F+EL DP+DQ R +Q+ AQ + +++ H
Sbjct: 410 RFEFFVYGRELANGFTELNDPIDQEQRFIDQL----------------AQREAGDAEAH- 452
Query: 528 YEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D D+VTALEYG+PP G+G+GIDRLVMLLT+S SIRDV+ FP +K
Sbjct: 453 ---VMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 499
>gi|416847768|ref|ZP_11907352.1| lysyl-tRNA synthetase, partial [Staphylococcus aureus O46]
gi|323442037|gb|EGA99672.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
Length = 464
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/485 (46%), Positives = 315/485 (64%), Gaps = 32/485 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDTRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPAS 548
MPP
Sbjct: 460 MPPTG 464
>gi|222152758|ref|YP_002561935.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
gi|222113571|emb|CAR41394.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
Length = 496
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 331/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ +L + + E + E + +AGR++ +R
Sbjct: 15 VRREKMVALAEQGIDPFGKRFERTATSAELINQFADKSKEELHDLEETAI-IAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGDENYEIFKK-ADLGDFLGVEGDIMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTD++ YR+R++D+IS + + F R+K++SEIR+ +
Sbjct: 133 KATKLTHLSKALRPLPEKFHGLTDIETIYRKRHLDLISNRDSFNRFVTRSKMISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ L F+EVETPVL AGGA ARPF+T+HN+ D+ LRIATELHLKR+++GG E++YEI
Sbjct: 193 DGLNFLEVETPVLHNEAGGAAARPFITHHNAQNMDMVLRIATELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTTIE+Y+AY+D+Q +MN+TE I+ H A AV G I+YQG I
Sbjct: 253 GRIFRNEGMDATHNPEFTTIEVYQAYADFQDIMNLTEGIIQHAAKAVKGDGPIEYQGQVI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF KE T+ + K + + SVG
Sbjct: 313 KINEPFKRIHMVDAIKEVTGVDF---------WKEMTVEEAIQLAQEKHVPLEKHFTSVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+E+SPLAK + T+RFELFI +E ANAF+E
Sbjct: 364 HIINAFFEEFVEETLIQPTFVFGHPVEVSPLAKKNPEDNRFTDRFELFIVTKEYANAFTE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ + KE DD + +D DFV ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAQAKELGDDEA--TGIDYDFVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|417940491|ref|ZP_12583779.1| lysine--tRNA ligase [Streptococcus oralis SK313]
gi|343389372|gb|EGV01957.1| lysine--tRNA ligase [Streptococcus oralis SK313]
Length = 496
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/514 (43%), Positives = 333/514 (64%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V++R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA A+PF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGHDFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIALELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT IE+Y+AY+D+ +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
+ P++R M + +KE TG+DF + D+ + + A K V + VG
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAKAIAA------EKKVPVEKHYTEVG 363
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NA+SE
Sbjct: 364 HIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAYSE 423
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEYG 543
L DP+DQ +R E AQ K KE DD + +D D++ ALEYG
Sbjct: 424 LNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|384209616|ref|YP_005595336.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira intermedia
PWS/A]
gi|343387266|gb|AEM22756.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira intermedia
PWS/A]
Length = 510
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/544 (41%), Positives = 344/544 (63%), Gaps = 43/544 (7%)
Query: 40 VSAGTRNRRASSSSTSTS-DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIY 98
+S N + + +TS ++ A + R +K+ LR G+ P+ +D T+ + + E +
Sbjct: 1 MSENQNNSENTQNEKNTSVEKNAEKENRREKLNTLRGMGINPFPNSYDVTYKSKDIAEKF 60
Query: 99 RHLANGEESNSENDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQ- 157
L E V+VAGR++ R GK +FLT++D GTIQ Y +K+++ D+F
Sbjct: 61 EELEKNET------EVAVAGRIMLYRVMGKSSFLTIKDAVGTIQAYIQKDKV-GDEFYNT 113
Query: 158 -LKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQR 216
K +DIGDI+GV G++ +T+ GE+++ N +LTKSL PLP+K+HGLTD + RYRQR
Sbjct: 114 VFKKLIDIGDIVGVKGTVFKTKTGEITIYANELKLLTKSLNPLPEKFHGLTDTELRYRQR 173
Query: 217 YVDMISKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSL 276
YVD+I +V + F KR+K++S IR+ + F+EVETP++ GGA+A+PF+T+HN+L
Sbjct: 174 YVDLIMNDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKPFITHHNTL 233
Query: 277 GRDLYLRIATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSM 336
LYLRIA EL+LKR+++GGF++++E+ R FRNEG+STRHNPEFT +E Y AY+++ +
Sbjct: 234 DMTLYLRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKV 293
Query: 337 MNITEEIVTHCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKV 396
M + EE+ + +NGK T Y+ EI + P+ R M +LVKE +G+DFN + +D
Sbjct: 294 MELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNAIQSD--- 350
Query: 397 AKETTLRALGDGLENKDKFVIESS---PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEIS 453
E +A G+E I++S P+ ++ VFE VE KL+QPTFV++YP +S
Sbjct: 351 -DEALEKAKSVGVE------IDTSKTKPTKWEVMVAVFEEKVEEKLIQPTFVINYPKAVS 403
Query: 454 PLAKPHRRHAGLTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEK 513
PL+K + + +TER+ELFI G EM+N FSEL DP+DQ+ R EEQ+ +A A E
Sbjct: 404 PLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQL------KAKARGED 457
Query: 514 SSAQEKLKESDDHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAF 573
+ + +D D++ ALEYG+PP G+G+GIDR+ +L N ASIRD I F
Sbjct: 458 ET--------------MDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNVASIRDTILF 503
Query: 574 PILK 577
P ++
Sbjct: 504 PQMR 507
>gi|387761592|ref|YP_006068569.1| lysyl-tRNA synthetase [Streptococcus salivarius 57.I]
gi|418018099|ref|ZP_12657655.1| lysyl-tRNA synthetase [Streptococcus salivarius M18]
gi|339292359|gb|AEJ53706.1| lysyl-tRNA synthetase [Streptococcus salivarius 57.I]
gi|345526948|gb|EGX30259.1| lysyl-tRNA synthetase [Streptococcus salivarius M18]
Length = 496
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/514 (44%), Positives = 328/514 (63%), Gaps = 33/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ ++AGR++ +R
Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F ++D G IQ+Y K+ + + +D K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHIQDRDGQIQIYVRKDAVGEENYDIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGL+DV+ YR+RY+D+IS E D F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF+EVETPVL AGGA A+PF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIALELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT IE+Y+AY+D+ +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + D+ + L N+ +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DMTFEEAV-------ALANEKHVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++N FE VE L QPTFV +P+ +SPLAK + T+RFELFI +E NA+S
Sbjct: 363 GQIINAFFEEFVEETLTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAYS 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ +R E Q AA E DD + +D D+V ALEYG
Sbjct: 423 ELNDPIDQLSRFEAQ---------AAAKEL---------GDDEA--TGIDYDYVEALEYG 462
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|417794387|ref|ZP_12441644.1| lysine--tRNA ligase [Streptococcus oralis SK255]
gi|334269862|gb|EGL88272.1| lysine--tRNA ligase [Streptococcus oralis SK255]
Length = 496
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/515 (43%), Positives = 334/515 (64%), Gaps = 35/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT ++ +L++ + L + E+ + N+ ++AGR+V++R
Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKFAEL-DKEQLHELNETATIAGRLVSKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+
Sbjct: 74 GKGKVGFAHLQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSI 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
L+K+L PLP+K+HGLTDV+ YR+RY+D+IS E + F R+KI+SEIR+ +
Sbjct: 133 KATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ F+EVETPVL AGGA A+PF+T+HN+ D+ LRIA ELHLKR+++GG E++YEI
Sbjct: 193 DGHDFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIALELHLKRLIVGGMERVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFT IE+Y+AY+D+ +M++TE I+ H A AV G ++YQG EI
Sbjct: 253 GRIFRNEGMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS-V 423
+ P++R M + +KE TG+DF + DL + L N+ +E + V
Sbjct: 313 KINEPFKRVHMVDAIKEITGVDFWQ---DLTFEEAV-------ALANEKHVPVEKHYTEV 362
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G+++N FE VE L+QPTFV +P+ +SPLAK + T+RFELFI +E NA+S
Sbjct: 363 GHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAYS 422
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKE-SDDHSYEVTLDDDFVTALEY 542
EL DP+DQ +R E AQ K KE DD + +D D++ ALEY
Sbjct: 423 ELNDPIDQLSRFE-------------------AQAKAKELGDDEA--TGIDYDYIEALEY 461
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRL MLLT++ +IRDV+ FP +K
Sbjct: 462 GMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496
>gi|297588654|ref|ZP_06947297.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
gi|297574027|gb|EFH92748.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
Length = 636
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/516 (43%), Positives = 335/516 (64%), Gaps = 44/516 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K++EL PY + ++ +AN +EI + N +E + + V +AGR++++R
Sbjct: 10 IRRQKLQELLDANENPYVH--EKFDNANNTKEI---VDNFDEFDGK--EVKIAGRIMSKR 62
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK+ F+ L+D G IQL+ + L + + ++K +DIGDI+GV G++ +T GE+S+
Sbjct: 63 GHGKVNFMDLQDSVGRIQLFNKVNELGEENYAKVKN-MDIGDIVGVEGTIFKTHSGEVSI 121
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
S V+L+KSL LP+K+HGL D D RYRQRYVD+I PE+ D F KR++I+S IR+ +
Sbjct: 122 RTKSVVLLSKSLQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREFL 181
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ GF+EV+TP+L AGGA ARPF+T+HN+L D+YLRIA EL+LKR+++GGF+K+YE+
Sbjct: 182 DTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMYLRIANELYLKRLIVGGFDKVYEM 241
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ HNPE+T IE+Y+AY+DY MM+ITE++V VNG + + EI
Sbjct: 242 GRMFRNEGMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKAQFGETEI 301
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLK---VAKETTLRALGDGLENKDKFVIESSP 421
PW+R TM + +KE I+F+E+ D + VAK + I+ +
Sbjct: 302 DFTPPWKRITMVDAIKEYADINFDEIETDEQAREVAKANNVD-------------IKENM 348
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G ++NE FE E KL+QPTFVL +P+E+SPLAK + T RFE F+C +E+ANA
Sbjct: 349 SRGEVINECFEHFCEEKLIQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANA 408
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL +P+DQ+ R +QV E + DD + +D DF+ ALE
Sbjct: 409 FSELNNPIDQKERFLKQV------------------EARENGDDEAQ--MMDYDFLNALE 448
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
G+PP G+G+G+DRL+M+LTN+ SIRD++ FP +K
Sbjct: 449 VGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFPTMK 484
>gi|315917696|ref|ZP_07913936.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|317059220|ref|ZP_07923705.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313684896|gb|EFS21731.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313691571|gb|EFS28406.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
Length = 493
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/523 (43%), Positives = 338/523 (64%), Gaps = 41/523 (7%)
Query: 58 DREAVRAL---RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHV 114
DR A +L + KK+EEL+ G++P+ K+D+ H + +I +H + E
Sbjct: 6 DRAAKESLIMEKWKKIEELKEMGIKPFGGKYDKKH---MVGDILKH------TPEEELIF 56
Query: 115 SVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSM 174
AGR+++ R GK+AF + D +G IQ+Y +++ L + F QL +++GD++G+ G++
Sbjct: 57 KTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDELGEEAF-QLVKMLNVGDMVGIEGTL 115
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
T GEL++ N +LTK++ LP+K+HGLTDV+ RYR+RYVD+I EV + F KR
Sbjct: 116 FITHTGELTLRANVVTLLTKNIRALPEKFHGLTDVETRYRKRYVDLIMNREVKETFLKRT 175
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
I+ E++K ++ GF+EVETP++ GGA ARPF+T+HN+L DLY+RIA EL+LK+++
Sbjct: 176 MIIKELKKYLDDRGFLEVETPMMHPIVGGAAARPFITHHNTLDVDLYMRIAPELYLKKLI 235
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGF+K+Y++ + FRNEG+STRHNPEFTT+E+Y+AY+D+ MM++TE ++T VNG
Sbjct: 236 VGGFDKVYDLNKCFRNEGMSTRHNPEFTTVELYQAYADFNDMMDLTEGVITTLCDKVNGT 295
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
I + GV++ L + ++R M +L+KE TG+DF K+ T +
Sbjct: 296 YDITFDGVDLHL-KDFKRVHMVDLIKEVTGVDF--------WRKDITFEEAKAFAKEHHV 346
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
+ + SVG+++NE FE E K++QPTF+ +P+EISPLAK + T+RFELFI
Sbjct: 347 EIADHMNSVGHVINEFFEQKCEEKVIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFIN 406
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
RE ANAFSEL DP DQR+R E QV E+ + +D + V +DD
Sbjct: 407 AREYANAFSELNDPADQRSRFEAQV------------------EEAERGNDEATPV-IDD 447
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+V ALEYG+PP G+G+GIDRLVMLLT + SIRDVI FP +K
Sbjct: 448 DYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490
>gi|194467683|ref|ZP_03073670.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
gi|194454719|gb|EDX43616.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
Length = 508
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/518 (44%), Positives = 329/518 (63%), Gaps = 35/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+ G+EP+ ++ R H A L + + + EE N V +AGR+ +R
Sbjct: 10 VRREKMEELKEAGIEPFGRRFKRDHLAQDLHDKFDQY-DKEELNEMGAKVIIAGRMTRKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK F D +G IQ+Y K+ + + + K DIGD LG+ G + +T+ GEL+V
Sbjct: 69 SSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKR-SDIGDFLGIEGDVIKTDTGELTV 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ L+K+L PLP+K+ G+TD + YRQRY+D+IS PE F +R I+ +RK +
Sbjct: 128 RAHKITFLSKALRPLPNKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYM 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF EVETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++GGFE++YE+
Sbjct: 188 DDNGFTEVETPILNTQAGGANARPFITHHNALDIDMYLRIATELYLKRLIVGGFERVYEL 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTT+E Y AY D+Q +M+ TE IV A V+ I YQG EI
Sbjct: 248 GRIFRNEGMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGNEI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP--S 422
L ++R TM + VKE TGIDF++ + AK+ D+ +E P +
Sbjct: 308 DLGGNFKRITMVDAVKEKTGIDFSDESMTDEDAKKLA-----------DEHKVEYKPYWT 356
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LN FE VE L+QPTFV ++P+E+SPLAK + + +T+RFEL++ G E+ANAF
Sbjct: 357 KGHILNAFFEEFVEDTLIQPTFVYEFPVEVSPLAKRNADNPAMTDRFELYVDGSELANAF 416
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R E Q A+EK +D+ +D D+V ALEY
Sbjct: 417 SELNDPIDQKERFEMQ-----------------AKEKANGNDEAE---PVDLDYVQALEY 456
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLT++ SIRDVI FP ++ ++
Sbjct: 457 GMPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMRPEK 494
>gi|312898248|ref|ZP_07757639.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620745|gb|EFQ04314.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 502
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 328/516 (63%), Gaps = 37/516 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+++ G+ P+ K++ TH A +++ E + VS+AGR++A R
Sbjct: 23 IRREKMQQFADAGVYPFGQKYNWTHHAQDIKD------RAEALEKDGTTVSLAGRLMALR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK AF LRD SG +QLY K+ + ++ K+ +DIGDI+GV G + T GE +V
Sbjct: 77 RHGKTAFCVLRDISGEVQLYFRKDVVGEASYELFKL-LDIGDIVGVEGDVFTTHTGETTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
V ++ +L+KSL PLP+K+HGLTD + RYRQRY+D+I PEV + F R++I+ IR+ +
Sbjct: 136 RVVTWTLLSKSLRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKNTFIMRSRIIKGIREYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
++ F+EVETP+L AGGA ARPFVT+HN+L D++LRIA ELHLKR+L+GG E++YE+
Sbjct: 196 DARNFLEVETPMLHNIAGGAAARPFVTHHNALDMDIFLRIAPELHLKRLLVGGLERVYEM 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
R FRNEG+ TRHNPEFTT+E+Y+A+ D + ++ ITEE+V+ AL + G I Y EI
Sbjct: 256 NRCFRNEGIDTRHNPEFTTVELYQAFGDLEDVIRITEELVSELALKLYGTTKITYIDKEI 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L PW R TM V++ TG DF+ KV R + D L + +G
Sbjct: 316 ELAAPWNRMTMIEAVEKYTGKDFS------KVETVEEARKIADELHVE----YGEYDGIG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
++N FE VE L+QPT + +P+EISPL K + LT RFE FI GRE+AN FSE
Sbjct: 366 KIINACFEDYVEENLIQPTVITGHPLEISPLTKQDASNPLLTHRFEAFIYGRELANGFSE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DPLDQR R +Q+ E+RA DD +++ +D+D+ ALEYGM
Sbjct: 426 LNDPLDQRDRFIKQM----EERA--------------HGDDEAHQ--MDEDYCRALEYGM 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PPA G+G+GIDRLVM LTNS SIRDV+ FP+ + +Q
Sbjct: 466 PPAGGLGIGIDRLVMFLTNSPSIRDVLLFPLSRPEQ 501
>gi|317486635|ref|ZP_07945452.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316922018|gb|EFV43287.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 527
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/520 (46%), Positives = 331/520 (63%), Gaps = 36/520 (6%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E V+ +K E L G+ + + +TH A ++ Y + E N+ + AGR
Sbjct: 39 EVVKNCVVKSCE-LMDAGVPLHLNGFVKTHDAGAIRAEYE-ACSATELEELNESFTCAGR 96
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK 179
+++ R+FGK+AF L D SG IQ Y K+ + + + K F DIGDI+GV G + RT+
Sbjct: 97 IISHRSFGKVAFFHLMDRSGRIQCYASKDLMGEEAYKHFKKF-DIGDIVGVHGKLFRTKT 155
Query: 180 GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSE 239
EL++ + +LTKS LP+K+ GLT+V+ RYRQRYVD+I+ P+V D+FRKR+KI+
Sbjct: 156 DELTLACDQVTLLTKSFRSLPEKHKGLTNVEIRYRQRYVDLITNPKVRDIFRKRSKIIRT 215
Query: 240 IRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFE 299
R +E GFVEVETP+L AGGA ARPF+T+HN+L +LY+RIA EL+LKR+L+GGFE
Sbjct: 216 FRAFLEERGFVEVETPMLHPVAGGAAARPFITHHNALDMELYMRIAPELYLKRLLVGGFE 275
Query: 300 KIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDY 359
K++E+ R FRNEG+S RHNPEFT E Y AY+ + +M++TEE+ + A V G I Y
Sbjct: 276 KVFELNRNFRNEGISIRHNPEFTMCEFYWAYATFYDLMDLTEELFSTIATEVCGSPIITY 335
Query: 360 QGVEICLER-PWRRETMHNLVKEATGIDFNELGNDL-KVAKETTLRALGDGLENKDKFVI 417
QG E+ L W+R T H + E G E ND KV +R G+ + DK
Sbjct: 336 QGTELDLTPGKWQRLTFHESL-EKIGGHSPEFYNDFDKVL--AYVRERGEKILKTDK--- 389
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+G L ++F++ VEPKLV PTF+ YP EISPLA+ ++ + +T+RFELFI GRE
Sbjct: 390 -----LGKLQAKLFDLDVEPKLVAPTFIYHYPTEISPLARRNKDNPDITDRFELFIMGRE 444
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
NAFSEL DP+DQR R E+QVR+ +AA DD + +D+D++
Sbjct: 445 YGNAFSELNDPIDQRMRFEQQVRE----KAAG--------------DDEA--CAMDEDYL 484
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALEYGMPPA+G G+GIDRLVMLLT+S SIR+VI FP+LK
Sbjct: 485 RALEYGMPPAAGEGIGIDRLVMLLTDSPSIREVIFFPLLK 524
>gi|227544676|ref|ZP_03974725.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
gi|338203805|ref|YP_004649950.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
gi|227185322|gb|EEI65393.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
gi|336449045|gb|AEI57660.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
Length = 508
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/518 (44%), Positives = 329/518 (63%), Gaps = 35/518 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+EEL+ G+EP+ ++ R H A L + + + EE N V +AGR+ +R
Sbjct: 10 VRREKMEELKEAGIEPFGRRFKRDHLAQDLHDKFDQY-DKEELNEMGAKVIIAGRMTRKR 68
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
+ GK F D +G IQ+Y K+ + + + K DIGD LG+ G + +T+ GEL+V
Sbjct: 69 SSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKR-SDIGDFLGIEGDVIKTDTGELTV 127
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ L+K+L PLP+K+ G+TD + YRQRY+D+IS PE F +R I+ +RK +
Sbjct: 128 RAHKITFLSKALRPLPNKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYM 187
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ GF EVETP+L AGGA ARPF+T+HN+L D+YLRIATEL+LKR+++GGFE++YE+
Sbjct: 188 DDNGFTEVETPILNTQAGGANARPFITHHNALDIDMYLRIATELYLKRLIVGGFERVYEL 247
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GRIFRNEG+ HNPEFTT+E Y AY D+Q +M+ TE IV A V+ I YQG EI
Sbjct: 248 GRIFRNEGMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGHEI 307
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP--S 422
L ++R TM + VKE TGIDF++ + AK+ D+ IE P +
Sbjct: 308 DLGGNFKRITMVDAVKEKTGIDFSDESMTDEDAKKLA-----------DEHKIEYKPYWT 356
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G++LN FE VE L+QPTFV ++P+E+SPLAK + + +T+RFEL++ G E+ANAF
Sbjct: 357 KGHILNAFFEEFVEDTLIQPTFVYEFPVEVSPLAKRNADNPAMTDRFELYVDGSELANAF 416
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R E Q A+EK +D+ +D D+V ALEY
Sbjct: 417 SELNDPIDQKERFEMQ-----------------AKEKANGNDEAE---PVDLDYVQALEY 456
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
GMPP G+G+GIDRLVMLLT++ SIRDVI FP ++ ++
Sbjct: 457 GMPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMRPEK 494
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,336,793,450
Number of Sequences: 23463169
Number of extensions: 341669390
Number of successful extensions: 1146862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11825
Number of HSP's successfully gapped in prelim test: 2126
Number of HSP's that attempted gapping in prelim test: 1100936
Number of HSP's gapped (non-prelim): 22359
length of query: 580
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 432
effective length of database: 8,886,646,355
effective search space: 3839031225360
effective search space used: 3839031225360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)