BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008040
(580 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8DMA9|SYK_THEEB Lysine--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1)
GN=lysS PE=3 SV=1
Length = 506
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/520 (60%), Positives = 389/520 (74%), Gaps = 36/520 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA RI+K + L+++G+ PYAY+W+RTH+A LQ+ Y HLA GE + D VSVAGR++
Sbjct: 11 IRATRIEKAKTLQAQGMSPYAYRWERTHTAALLQDKYAHLAAGE---AVGDRVSVAGRIM 67
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ----FDQLKVFVDIGDILGVSGSMKRT 177
ARR FGKLAF TL+DDSGTIQLY +K+ + F LK D+GDILG G++KRT
Sbjct: 68 ARRIFGKLAFFTLQDDSGTIQLYLDKQTISQTMGEAAFADLKHLTDVGDILGAVGTLKRT 127
Query: 178 EKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIV 237
EKGELSV+V S+ +LTKSLLPLPDK+HGLTDV+KRYRQRYVD+I P+V D FRKRA I
Sbjct: 128 EKGELSVVVESYTMLTKSLLPLPDKWHGLTDVEKRYRQRYVDLIVNPQVRDTFRKRALIT 187
Query: 238 SEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGG 297
+ IR+ + GF+E+ETPVLQ AGGAEARPF+TYHN+L LYLRIATELHLKR+++GG
Sbjct: 188 AAIRRYLNEQGFIEIETPVLQVEAGGAEARPFITYHNTLEMQLYLRIATELHLKRLIVGG 247
Query: 298 FEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTI 357
FEK+YE+GRIFRNEG+ST+HNPEFT+IE+Y+AY+DY MM +TE I+T A+ V G L I
Sbjct: 248 FEKVYELGRIFRNEGISTKHNPEFTSIEVYQAYADYNDMMTLTEAIITTGAMEVLGTLKI 307
Query: 358 DYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVI 417
YQG I L PWRR TMH+ V ATGIDF +LG DL AK + A G+++ D
Sbjct: 308 TYQGETIDLTPPWRRVTMHDAVLAATGIDFRQLG-DLTAAK---IAAQKVGVKDLD---- 359
Query: 418 ESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRE 477
+ ++G +LNEVFE +VEP L+QPTFVLDYP+EISPLAKPHR GL ERFELFI GRE
Sbjct: 360 -TCDTIGRVLNEVFEQIVEPTLIQPTFVLDYPVEISPLAKPHRSQPGLVERFELFIVGRE 418
Query: 478 MANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFV 537
AN+FSELTDPLDQR RLEEQ R+ AA HS +D+DF+
Sbjct: 419 HANSFSELTDPLDQRQRLEEQARRKAAGDLAA----------------HS----VDEDFL 458
Query: 538 TALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
TALE+GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 459 TALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 498
>sp|P73443|SYK_SYNY3 Lysine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=lysS PE=3 SV=1
Length = 510
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/536 (58%), Positives = 396/536 (73%), Gaps = 38/536 (7%)
Query: 51 SSSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE 110
+ S S S E +RA R++K E+LR GL PYAY W+ TH A LQE YR L+NGEE + +
Sbjct: 2 ADSHSHSSLEEIRATRLEKAEQLRQLGLNPYAYTWEITHQAQDLQETYRDLSNGEEVDLK 61
Query: 111 NDHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERL------LSDQFDQLKVFVDI 164
V++AGR++ARR GKLAF TL+D+SGTIQLY EK+RL L + F+ LK D+
Sbjct: 62 ---VAIAGRILARRVMGKLAFFTLQDESGTIQLYLEKQRLTEHMPELENAFNLLKKITDV 118
Query: 165 GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKP 224
GDILGV+G++KRTEKGELSV V ++ +LTKSLLPLPDK+HGLTD +KRYRQRYVD+I P
Sbjct: 119 GDILGVTGTLKRTEKGELSVYVQTYAVLTKSLLPLPDKWHGLTDTEKRYRQRYVDLIVNP 178
Query: 225 EVADVFRKRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRI 284
V FR+RA+I + IR+ ++ GF+E+ETPVLQG +GGAEARPF+T+HN+LG LYLRI
Sbjct: 179 TVRQTFRRRAQITAAIRRYLDKQGFIEIETPVLQGESGGAEARPFITHHNTLGMPLYLRI 238
Query: 285 ATELHLKRMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIV 344
ATELHLKR+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY DY MM +TE +V
Sbjct: 239 ATELHLKRLVVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYVDYNEMMALTEALV 298
Query: 345 THCALAVNGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRA 404
T A AV G L I YQG EI L PW+R TMH V+ TGIDF++ DL+ AK+ +A
Sbjct: 299 TTAAQAVLGTLKITYQGEEIDLTPPWKRITMHEAVQLETGIDFSQF-TDLETAKQAATKA 357
Query: 405 LGDGLENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAG 464
G G V E PS+G+LLN FE VE L+QPTF++D+P+EISPLAKPHR G
Sbjct: 358 -GIG-------VPEDCPSLGHLLNHAFEQKVEGTLMQPTFIIDFPVEISPLAKPHRSKPG 409
Query: 465 LTERFELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESD 524
L ERFELF+ GRE+AN+FSELTDP+DQR+RLE Q K+AA E S
Sbjct: 410 LVERFELFVYGRELANSFSELTDPIDQRSRLEAQA----AKKAAGDLEAHS--------- 456
Query: 525 DHSYEVTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
+D+DF+TALEYGMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK Q+
Sbjct: 457 -------VDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKNQE 505
>sp|B2J384|SYK_NOSP7 Lysine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=lysS PE=3 SV=1
Length = 561
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 310/525 (59%), Positives = 382/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + LA+GEE + E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEQFADLASGEEVDLE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL+D++GTIQLY +K R+ +D F+ LK D GDILGV G
Sbjct: 61 IMARRVFGKLAFFTLQDETGTIQLYLDKNRIQESMADIDADAFNHLKQLTDAGDILGVKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPF+T+HN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITHHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFTTIE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEVYQAYADYNDMMALTEGIITTVAQEVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG I L PWRR TMH+LVKE TG+DFN L+ AK + A G
Sbjct: 301 GTLQITYQGEPIDLTPPWRRVTMHDLVKEFTGLDFNSF-QTLEEAKTASKNAGIPG---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++ + S+G LLN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----VDEAKSIGKLLNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE N+FSELTDP+DQR RLE Q E++AA E +
Sbjct: 412 IVGRETGNSFSELTDPIDQRERLEAQA----ERKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>sp|Q8YPW9|SYK_NOSS1 Lysine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=lysS PE=3 SV=1
Length = 561
Score = 614 bits (1583), Expect = e-175, Method: Compositional matrix adjust.
Identities = 307/525 (58%), Positives = 380/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE +E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVETE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL D++GTIQLY EK R+ ++ F+ LK D+GDILG G
Sbjct: 61 IMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAEIDANAFNHLKQLTDVGDILGAKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELSV V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSVYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ AGGA+ARPFVTYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFVTYHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMALTEGIITTVAQDVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH+LVKE TG+DF+ L+ AK A G
Sbjct: 301 GTLQITYQGETVDLTPPWRRVTMHDLVKEYTGLDFHSF-QTLEEAKSAGKNAGIPG---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++ + ++G +LN FE VE KL+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----VDEAQTIGKILNLAFEEKVETKLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLE Q K+AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRERLEAQA----AKKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>sp|Q3M8C8|SYK_ANAVT Lysine--tRNA ligase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=lysS PE=3 SV=1
Length = 561
Score = 613 bits (1581), Expect = e-174, Method: Compositional matrix adjust.
Identities = 303/525 (57%), Positives = 380/525 (72%), Gaps = 39/525 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +RA R++KVE+L+ G PYAY+W+ TH A QLQE + L +GEE ++E V++AGR
Sbjct: 4 EDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVDTE---VAIAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSG 172
++ARR FGKLAF TL D++GTIQLY EK R+ +D F+ LK D+GDILG G
Sbjct: 61 IMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAETDADAFNHLKQLTDVGDILGAKG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++KRTEKGELS+ V + ILTKSLLPLPDK+HGLTDV KRYRQRYVD+I PEV FR+
Sbjct: 121 TIKRTEKGELSIYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA+I + IR+ +E F+E+ETPVLQ GGA+ARPF+TYHN+L +LYLRIATELHLKR
Sbjct: 181 RAQITAGIRRYLEQRDFLEIETPVLQSETGGADARPFITYHNTLEMELYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFEK++E+GR+FRNEG+STRHNPEFT+IE+Y+AY+DY MM +TE I+T A V
Sbjct: 241 LIVGGFEKVFELGRVFRNEGISTRHNPEFTSIEIYQAYADYNDMMALTEGIITTVAQDVL 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I YQG + L PWRR TMH+LVKE TG+DF+ L+ AK + A G
Sbjct: 301 GTLQITYQGETVDLTPPWRRVTMHDLVKEYTGLDFHSF-QTLEEAKSASKNAGIPG---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++ + ++G +LN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELF
Sbjct: 356 ----VDEAQTIGKILNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELF 411
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE AN+FSELTDP+DQR RLE Q K+AA E +
Sbjct: 412 IVGRETANSFSELTDPIDQRERLEAQA----AKKAAGDLEAQG----------------V 451
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+TALEYGMPP G+G+GIDRLVMLLT+SASIRDVIAFP+LK
Sbjct: 452 DEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLK 496
>sp|Q5N1D9|SYK_SYNP6 Lysine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=lysS PE=3 SV=1
Length = 504
Score = 610 bits (1572), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/523 (58%), Positives = 380/523 (72%), Gaps = 39/523 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA R++K +LR G EPYAY+WD +HSA QLQ +Y L GEE E V++AGR++
Sbjct: 4 LRATRLEKALQLRELGFEPYAYRWDCSHSAAQLQALYADLPAGEEVAVE---VAIAGRIM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSM 174
ARR FGKLAF TL+D+SG IQLY EK+RL ++ F LK D+GDILGV GS+
Sbjct: 61 ARRVFGKLAFFTLQDESGQIQLYLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSV 120
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
+RTEKGELS+ V+ + ILTKSL PLPDK+HGLTDV+KRYRQRYVD+I PEV + FR+RA
Sbjct: 121 RRTEKGELSIAVDQYAILTKSLQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRA 180
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI + IR+ +E GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATELHLKR++
Sbjct: 181 KITAAIRRHLEDQGFIEIETPVLQAEAGGAEARPFITYHNTLELDLYLRIATELHLKRLI 240
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY+ MM +TE ++ A V G
Sbjct: 241 VGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYEDMMRLTETLIAQVAEQVVGS 300
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
L + YQG I L PW+R TM LV ATGIDF L DL+ A ++A G
Sbjct: 301 LQVPYQGQTIDLAPPWKRATMAELVLAATGIDFESL-KDLE-AGIAAVKAAGIP------ 352
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V E P++G LLN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELFI
Sbjct: 353 -VPEDCPNLGKLLNHCFEEKVEATLIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIV 411
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE AN+FSELTDP+DQR RLE Q +K A V E++D +D+
Sbjct: 412 GRETANSFSELTDPVDQRQRLEAQA---ADKAAGNV-----------EAND------VDE 451
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ ALE+GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 DFLLALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 494
>sp|Q31KH4|SYK_SYNE7 Lysine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942)
GN=lysS PE=3 SV=1
Length = 504
Score = 610 bits (1572), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/523 (58%), Positives = 380/523 (72%), Gaps = 39/523 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+RA R++K +LR G EPYAY+WD +HSA QLQ +Y L GEE E V++AGR++
Sbjct: 4 LRATRLEKALQLRELGFEPYAYRWDCSHSAAQLQALYADLPAGEEVAVE---VAIAGRIM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLL-------SDQFDQLKVFVDIGDILGVSGSM 174
ARR FGKLAF TL+D+SG IQLY EK+RL ++ F LK D+GDILGV GS+
Sbjct: 61 ARRVFGKLAFFTLQDESGQIQLYLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSV 120
Query: 175 KRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRA 234
+RTEKGELS+ V+ + ILTKSL PLPDK+HGLTDV+KRYRQRYVD+I PEV + FR+RA
Sbjct: 121 RRTEKGELSIAVDQYAILTKSLQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRA 180
Query: 235 KIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRML 294
KI + IR+ +E GF+E+ETPVLQ AGGAEARPF+TYHN+L DLYLRIATELHLKR++
Sbjct: 181 KITAAIRRHLEDQGFIEIETPVLQAEAGGAEARPFITYHNTLELDLYLRIATELHLKRLI 240
Query: 295 IGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGK 354
+GGFEK++E+GRIFRNEG+STRHNPEFT+IE+Y+AY+DY+ MM +TE ++ A V G
Sbjct: 241 VGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYEDMMRLTETLIAQVAEQVVGS 300
Query: 355 LTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDK 414
L + YQG I L PW+R TM LV ATGIDF L DL+ A ++A G
Sbjct: 301 LQVPYQGQTIDLAPPWKRATMAELVLAATGIDFESL-KDLE-AGIAAVKAAGIP------ 352
Query: 415 FVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFIC 474
V E P++G LLN FE VE L+QPTFV+DYP+EISPLAKPHR GL ERFELFI
Sbjct: 353 -VPEDCPNLGKLLNHCFEEKVEATLIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIV 411
Query: 475 GREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDD 534
GRE AN+FSELTDP+DQR RLE Q +K A V E++D +D+
Sbjct: 412 GRETANSFSELTDPVDQRQRLEAQA---ADKAAGNV-----------EAND------VDE 451
Query: 535 DFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
DF+ ALE+GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 DFLLALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 494
>sp|Q0IDW9|SYK_SYNS3 Lysine--tRNA ligase OS=Synechococcus sp. (strain CC9311) GN=lysS
PE=3 SV=1
Length = 489
Score = 560 bits (1443), Expect = e-158, Method: Compositional matrix adjust.
Identities = 286/516 (55%), Positives = 362/516 (70%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L+ +G EPYA ++D T +LQ + LA G E + + VSVAGRV+
Sbjct: 4 LRETRLEKANALKEQGQEPYALRFDLTDRMARLQADHADLAKGAERDLK---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++GTIQL+ EK L D F QL VD GD++GV G ++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKA-TLGDSFAQLSSLVDAGDLIGVHGILRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V+ + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA VS IR
Sbjct: 120 LSVKVSKWEMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRAMAVSAIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+++GGFE++
Sbjct: 180 RWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLPLYLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE+++ V G I YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEVYQAYADYNDMMTLTEQLIASVCEQVCGTTRISYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
VE+ L WRR TMH LV+EATG+DF + + A +RA L DK +
Sbjct: 300 VEVDLTPSWRRATMHELVQEATGLDFTSF--ETREAAVEAMRAA--NLPAPDK-----AD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
+VG LLNE FE VEP L+QPTFVLDYP EISPLA+ HR GL ERFELFI GRE ANA
Sbjct: 351 TVGRLLNEAFEHAVEPNLIQPTFVLDYPQEISPLARKHRSKPGLVERFELFIVGRETANA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSELTDPLDQR R+E Q E+RAA E S +D+DF+ ALE
Sbjct: 411 FSELTDPLDQRGRMELQ----QERRAAGDVEASG----------------VDEDFIQALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+++
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMR 486
>sp|Q7U3A4|SYK_PROMM Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9313)
GN=lysS PE=3 SV=1
Length = 508
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/524 (54%), Positives = 360/524 (68%), Gaps = 40/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L+ G PYA +++ +HS LQ + LA GEE VSVAGRV+
Sbjct: 12 LRETRLEKAQALKELGNGPYALRFESSHSTANLQADHADLAKGEERLLT---VSVAGRVM 68
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK--------ERLLSDQFDQLKVFVDIGDILGVSGS 173
RR GKLAF TL D++GTIQLY EK L S F QL VD GD +GV+G
Sbjct: 69 TRRVMGKLAFYTLADETGTIQLYLEKATIDAAASNELASGTFVQLTTLVDAGDWIGVTGV 128
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELSV V + IL+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+R
Sbjct: 129 LRRTDRGELSVKVQQWQILSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRR 188
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A +VS IR+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+
Sbjct: 189 ALMVSAIRRWLDDRAFLEIETPVLQAEAGGAEARPFITHHNTLDLPLYLRIATELHLKRL 248
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE++++ + G
Sbjct: 249 VVGGFERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYADYIDMMVLTEQLISSVCTQICG 308
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQG+EI L PWRR +MH LV+EATG+DF DL VA R GLE
Sbjct: 309 STRITYQGIEIDLTPPWRRASMHELVQEATGLDFMGF-KDLAVAASAMARV---GLEVPS 364
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
K + SVG LLNE FE VE L+QPTFVLDYPIEISPLA+ HR GL ERFELFI
Sbjct: 365 K-----ADSVGRLLNEAFEQAVEVSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFI 419
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DPLDQR RLE Q Q + + D ++ V D
Sbjct: 420 VGRETANAFSELIDPLDQRQRLEAQ------------------QARRQAGDLEAHGV--D 459
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVML T+S SIRDVIAFP+L+
Sbjct: 460 EDFLQALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIAFPLLR 503
>sp|Q7U9X5|SYK_SYNPX Lysine--tRNA ligase OS=Synechococcus sp. (strain WH8102) GN=lysS
PE=3 SV=1
Length = 502
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 287/519 (55%), Positives = 357/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L G PYA ++ TH L E + L NGEE VSVAGRV+
Sbjct: 4 LRDTRLEKCQALSDLGQGPYALNFEPTHRMAALHEAHADLPNGEEREVT---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++GTIQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITGLVDGGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V+ + +LTK+L PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA++VS
Sbjct: 121 RGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLIVSPDSRETFRRRARLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDQRDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE++V+ V G I
Sbjct: 241 ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVSAVCQEVCGSCQIT 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQ EI L PWRR TMH LV+EATG+DFN + A T G GL E
Sbjct: 301 YQDTEIDLSPPWRRATMHELVEEATGLDFNSFSSREAAAVAMT----GKGLHAP-----E 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ SVG LLNE FE VE L+QPTFV DYP+EISPLA+PHR GL ERFELFI GRE
Sbjct: 352 LADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREH 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSELTDP+DQR RLE Q ++AA E LD+DFVT
Sbjct: 412 ANAFSELTDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVT 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 490
>sp|A9BD62|SYK_PROM4 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9211)
GN=lysS PE=3 SV=1
Length = 503
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/525 (53%), Positives = 365/525 (69%), Gaps = 40/525 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K + L+ G PY +++ TH A LQ ++ LANG+E E V VAGRV+
Sbjct: 4 LKETRLEKAQVLKKLGNGPYGIRFEVTHKAAVLQVEHQDLANGQERQLE---VCVAGRVI 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS----DQ-----FDQLKVFVDIGDILGVSG 172
+RR GKLAF TL D+SG+IQL+ EK L DQ F QL VD GD +GV+G
Sbjct: 61 SRRVMGKLAFFTLSDESGSIQLFLEKATLEEHSDLDQESPGSFSQLTDLVDSGDWIGVNG 120
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++RT++GELS+ V S+ +L KSL PLPDK+HGL+DV+KRYRQRYVD+I P+ FR
Sbjct: 121 ILRRTDRGELSIKVFSWTMLCKSLQPLPDKWHGLSDVEKRYRQRYVDLIVNPQSRKTFRS 180
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RA +VS IR+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 181 RALMVSAIRRWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLSLYLRIATELHLKR 240
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
+++GGFE++YE+GRIFRNEG+STRHNPEFTT+E+Y+A++DY MM++TEE+++ +
Sbjct: 241 LVVGGFERVYELGRIFRNEGISTRHNPEFTTVEIYQAFADYTDMMDLTEEMISFVCSQIC 300
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G TI YQG E+ L PWRR TMH LV E+TG+DF E G D+ A T ++++G
Sbjct: 301 GSTTIQYQGKEVDLTPPWRRITMHELVLESTGLDFYEFGQDISKAS-TAMQSVGLN---- 355
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
V + + SVG L+NE FE VE L QPTFV+DYPIEISPLA+ HR G+ ERFELF
Sbjct: 356 ---VPDHADSVGRLMNEAFEQAVEGDLFQPTFVMDYPIEISPLARKHRSKPGIVERFELF 412
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE ANAFSEL DP+DQ+ RL + Q + ++A + +
Sbjct: 413 IAGRETANAFSELIDPVDQKERL---LLQQSRRQAGDLEAH-----------------VI 452
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DFV ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 453 DEDFVNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 497
>sp|A2C629|SYK_PROM3 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9303)
GN=lysS PE=3 SV=1
Length = 508
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 282/524 (53%), Positives = 357/524 (68%), Gaps = 40/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L+ G PYA +++ +H LQ + LA GEE VSVAGRV+
Sbjct: 12 LRETRLEKAQALKELGNGPYALRFESSHRTANLQADHADLAKGEERLLS---VSVAGRVM 68
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK--------ERLLSDQFDQLKVFVDIGDILGVSGS 173
ARR GKLAF TL D++GTIQLY +K L S F QL VD GD +GV+G
Sbjct: 69 ARRVMGKLAFYTLADETGTIQLYLDKATIDAAASNELASGTFVQLTTLVDAGDWIGVTGV 128
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELSV V + IL+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+R
Sbjct: 129 LRRTDRGELSVKVQQWQILSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRR 188
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A +VS IR+ ++ F+E+ETPVLQ AGGAEARPF+T+HN+L LYLRIATELHLKR+
Sbjct: 189 ALMVSAIRRWLDDRAFLEIETPVLQAEAGGAEARPFITHHNTLDLPLYLRIATELHLKRL 248
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY MM +TE++++ + G
Sbjct: 249 VVGGFERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYADYIDMMVLTEQLISSVCTQICG 308
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQG+EI L PWRR +MH LV+EATG+DF + A GLE
Sbjct: 309 STRITYQGIEIDLTPPWRRASMHELVQEATGLDFMGFADRAVAASAMARA----GLEVPS 364
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
K + SVG LLNE FE VE L+QPTFVLDYPIEISPLA+ HR GL ERFELFI
Sbjct: 365 K-----ADSVGRLLNEAFEQAVEVSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFI 419
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DPLDQR RLE Q Q + + D ++ V D
Sbjct: 420 VGRETANAFSELIDPLDQRQRLEAQ------------------QARRQAGDLEAHGV--D 459
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVML T+S SIRDVIAFP+L+
Sbjct: 460 EDFLQALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIAFPLLR 503
>sp|Q3ANE6|SYK_SYNSC Lysine--tRNA ligase OS=Synechococcus sp. (strain CC9605) GN=lysS
PE=3 SV=1
Length = 502
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/519 (53%), Positives = 356/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L G PYA + +H +LQ + L GEE + VSVAGRV+
Sbjct: 4 LRDTRLEKARTLEELGQGPYALTFSPSHRMAELQVTHADLPKGEERDVS---VSVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++G+IQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGSIQLFLEKAGLEAQQEGWFKQITSLVDSGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V+ + +LTK+L PLPDK+HGL DV+KRYRQRY+D++ P+ + FR+RA++VS
Sbjct: 121 RGELSVKVSDWRMLTKALQPLPDKWHGLADVEKRYRQRYLDLVVSPDSRETFRRRARLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDQRDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE++V+ V G TI
Sbjct: 241 ERVYELGRIFRNEGVSTRHNPEFTSVEIYQAYSDYVGMMELTEQMVSAVCEEVCGTTTIT 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG EI L PWRR TMH LV++ATG+DFN + + A T + L E
Sbjct: 301 YQGTEIDLAPPWRRATMHELVQDATGLDFNGFSSREEAAAAMTAKGL---------HAPE 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
+ SVG LLNE FE VE L+QPTFV DYP+EISPLA+PHR GL ERFELFI GRE
Sbjct: 352 LADSVGRLLNEAFEQAVETTLIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREH 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSELTDP+DQR RLE Q ++AA E LD+DFV
Sbjct: 412 ANAFSELTDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVM 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+ SIRDVIAFP+L+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDCPSIRDVIAFPLLR 490
>sp|A3PFA8|SYK_PROM0 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9301)
GN=lysS PE=3 SV=1
Length = 512
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/525 (51%), Positives = 365/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K L SKG YA + +H+ + L + + +L NG+E EN VS+AGRV+
Sbjct: 4 IKEARLQKASSLVSKGFASYAQSFRVSHTTSFLIQKFDYLENGQE---ENFSVSLAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK---------ERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY EK ++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQDGQIQLYLEKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IRK +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+STRHNPEFT++E+YEAYSDY MMN+TEE++
Sbjct: 239 MVVGGFEKVYELGRIFRNEGISTRHNPEFTSVEIYEAYSDYVDMMNLTEELIKDILADAC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G LTI+YQ EI +PW R +M ++VK+ TGIDF+ D AK+ ++ + NK
Sbjct: 299 GSLTINYQNKEIDFSKPWLRISMKDIVKKYTGIDFHSFNGDFLAAKK-AVKNINVDFSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++G LLNEVFE VE KL++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 -------VNTIGRLLNEVFEQKVESKLIEPTFVIDYPVEISPLARPHFDNKEIVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ D +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDKGDLEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNSASIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPLLK 495
>sp|A5GI38|SYK_SYNPW Lysine--tRNA ligase OS=Synechococcus sp. (strain WH7803) GN=lysS
PE=3 SV=1
Length = 489
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/516 (54%), Positives = 358/516 (69%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++KV LR +G EPYA +D + +LQ + L GEE + V+VAGRV+
Sbjct: 4 LRETRLEKVSALRDQGREPYALTFDPSDRMARLQSDHADLPKGEERDCA---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++GTIQL+ EK L + F Q+ VD GD++GV G+++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKA-ALGEAFAQITSLVDAGDLIGVRGTLRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV V + +LTKSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA VS IR
Sbjct: 120 LSVKVAEWTMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRALTVSAIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+++GGFE++
Sbjct: 180 RWLDEREFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+AY+DY M+ +TE ++ V G + YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEVYQAYADYLGMIELTESMIASVCEQVCGGTRLTYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L PWRR TMH LV+EATG+DF + A+ T + GL DK +
Sbjct: 300 TEIDLTPPWRRATMHELVEEATGLDFTAFADRAAAAEAMTAK----GLPVPDK-----AD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG LLNE FE VE L+QPTFVLDYP EISPLA+ HR GL ERFELFI GRE ANA
Sbjct: 351 SVGRLLNEAFEHAVEANLIQPTFVLDYPEEISPLARKHRSKPGLVERFELFIVGRETANA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQR RLE Q + R AA E++ +D+DF+ ALE
Sbjct: 411 FSELIDPVDQRGRLEAQ-----QARRAAGDEEAQG---------------VDEDFLQALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 486
>sp|A5GQ58|SYK_SYNR3 Lysine--tRNA ligase OS=Synechococcus sp. (strain RCC307) GN=lysS
PE=3 SV=1
Length = 502
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/516 (53%), Positives = 353/516 (68%), Gaps = 33/516 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K + L G PYA +++ +H +LQ+ + L NGEE + V++AGRV+
Sbjct: 4 LRDTRLEKAQALIECGQVPYALRFEPSHRTAELQQAHADLPNGEERDVS---VAIAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
RR GKLAF TL D++G IQL+ EK L D F Q+ VD GD +GV G+++RT++GE
Sbjct: 61 TRRVMGKLAFFTLADETGPIQLFLEKA-ALGDAFKQITSLVDAGDWIGVKGTLRRTDRGE 119
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
LSV + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ D FR+RA++VS IR
Sbjct: 120 LSVKAAQWQMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPDTRDTFRRRAQLVSGIR 179
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
+ ++ F+E+ETPVLQ GGA+ARPF T+HN+L L LRIATELHLKR+++GGFE++
Sbjct: 180 RWLDERDFLEIETPVLQSEPGGADARPFETHHNALDLPLTLRIATELHLKRLVVGGFERV 239
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YE+GRIFRNEG+STRHNPEFT++E+Y+A++DY MM++TEE+++ V G I+YQG
Sbjct: 240 YELGRIFRNEGVSTRHNPEFTSVEIYQAFADYNDMMDLTEELISSVTQQVCGSTLINYQG 299
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
EI L WRR TMH LVKEATG+DF + A +E K +
Sbjct: 300 TEINLAPGWRRATMHELVKEATGLDFAGFSSREDAAA---------AMEAKGLQTPALAD 350
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
SVG LLNE FE VE L+QPTFV DYP+EISPLA+ HR GL ERFELFI GRE NA
Sbjct: 351 SVGRLLNEAFEQAVEETLIQPTFVTDYPVEISPLARSHRSKPGLVERFELFIVGREHGNA 410
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSELTDP+DQR RLE Q E+RAA E +D+DF+ ALE
Sbjct: 411 FSELTDPVDQRQRLEAQ----QERRAAGDLEAQR----------------VDEDFLNALE 450
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+LK
Sbjct: 451 VGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLK 486
>sp|Q318C3|SYK_PROM9 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9312)
GN=lysS PE=3 SV=1
Length = 512
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/525 (50%), Positives = 366/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L SKG YA + +H+ L + + +L NG+E E+ VS+AGRV+
Sbjct: 4 IREARLQKANSLVSKGFASYAESFSVSHTTKFLIQKFDYLENGQE---EDFSVSLAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEK---------ERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY +K ++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQEGQIQLYLDKRMINCNLENQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IR+ +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRQWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+ST+HNPEFT++E+Y+A+S+Y MMN+TEE++ V
Sbjct: 239 MVVGGFEKVYELGRIFRNEGISTKHNPEFTSVEIYQAFSNYVDMMNLTEELIKDIVFNVC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQ EI +PW R +M ++VK+ TGIDF+ D + AK+ ++++ NK
Sbjct: 299 GSLVINYQNKEIDFSKPWSRISMKDIVKKYTGIDFDSFSGDFQSAKQ-AVKSINVEFSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
S+G LLNEVFE VE +L++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 VN-------SMGRLLNEVFEQKVESELIEPTFVIDYPVEISPLARPHLDNKEMVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ DH +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDEGDHEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNS SIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSPSIRDVIPFPLLK 495
>sp|Q7V9Q0|SYK_PROMA Lysine--tRNA ligase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=lysS PE=3 SV=1
Length = 502
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/524 (52%), Positives = 359/524 (68%), Gaps = 39/524 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K LR G +PYA + TH +LQ ++ L NG++ + V+VAGRV+
Sbjct: 4 LRETRLEKAASLRKVGKDPYALNFHPTHKTAELQSDHKDLPNGQDREIK---VAVAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLS--------DQFDQLKVFVDIGDILGVSGS 173
+RR GKLAF TL D+SG+IQL+ EK L F Q+ FVD GD LGV+G
Sbjct: 61 SRRVMGKLAFFTLLDESGSIQLFLEKATLEEFDTSENQVSSFKQITDFVDAGDWLGVNGI 120
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
++RT++GELS+ V+S+ IL KSL PLPDK+HGL D++KRYRQRY+D++ P+ FR+R
Sbjct: 121 LRRTDRGELSIKVHSWKILCKSLQPLPDKWHGLADIEKRYRQRYLDLVVNPDSRKTFRRR 180
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
A VS IR+ ++ F+E+ETPVLQ AAGGA+ARPF+T+HN+ L+LRIATELHLKR+
Sbjct: 181 ALTVSAIRRWLDERSFLEIETPVLQSAAGGADARPFITHHNTFDIPLFLRIATELHLKRL 240
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFE++YE+GRIFRNEG+STRHNPEFT++E+Y+A++DY MM++TEE+++ + + G
Sbjct: 241 VVGGFERVYELGRIFRNEGISTRHNPEFTSVEIYQAFADYNQMMDLTEELISSVCIEICG 300
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
I YQ V + L PWRR TM LV EATGIDF+ D + A + GLE
Sbjct: 301 STKISYQDVSLDLTPPWRRVTMQELVLEATGIDFDNFDGDQEKASSEMINL---GLE--- 354
Query: 414 KFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI 473
V ++ SVG L+NE FE VEP L+QPTFV+DYPI+ISPLA+ HR + ERFELFI
Sbjct: 355 --VPSTADSVGRLMNEAFEQKVEPNLIQPTFVIDYPIDISPLARKHRCKEDMVERFELFI 412
Query: 474 CGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLD 533
GRE ANAFSEL DP+DQR RL Q + NE A HS LD
Sbjct: 413 AGRETANAFSELIDPIDQRERLLAQQIRKNEGDIEA----------------HS----LD 452
Query: 534 DDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+DF+ ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+L+
Sbjct: 453 EDFLNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLR 496
>sp|Q3B0J9|SYK_SYNS9 Lysine--tRNA ligase OS=Synechococcus sp. (strain CC9902) GN=lysS
PE=3 SV=1
Length = 502
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/519 (54%), Positives = 354/519 (68%), Gaps = 35/519 (6%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R++K L G PYA +D +H +LQ + L NGEE V+VAGRV+
Sbjct: 4 LRDTRLEKANTLEQLGQGPYALTFDPSHRMAELQADHADLPNGEERELS---VAVAGRVM 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQ---FDQLKVFVDIGDILGVSGSMKRTE 178
RR GKLAF TL D++GTIQL+ EK L + Q F Q+ VD GD LGVSG+++RT+
Sbjct: 61 TRRVMGKLAFFTLADETGTIQLFLEKAGLEAQQEGWFKQITSLVDAGDWLGVSGTLRRTD 120
Query: 179 KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVS 238
+GELSV V + +L+KSL PLPDK+HGL DV+KRYRQRY+D+I P+ + FR+RA +VS
Sbjct: 121 RGELSVKVRDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALLVS 180
Query: 239 EIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGF 298
IR+ ++ F+E+ETPVLQ AGGA+ARPF+T+HN+L LYLRIATELHLKR+++GGF
Sbjct: 181 GIRRWLDERQFLEIETPVLQSEAGGADARPFITHHNTLDLPLYLRIATELHLKRLVVGGF 240
Query: 299 EKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTID 358
E++YE+GRIFRNEG+STRHNPEFT++E+Y+AYSDY MM +TE ++ V G I
Sbjct: 241 ERVYELGRIFRNEGMSTRHNPEFTSVEVYQAYSDYIGMMELTEAMIAEVCQQVCGGTRIH 300
Query: 359 YQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIE 418
YQG +I L PWRR TMH LV+EATG++F + A+ GLE V
Sbjct: 301 YQGTDIDLTPPWRRATMHELVEEATGLNFEAFTTRAQAAEAMEAA----GLE-----VPG 351
Query: 419 SSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREM 478
++ SVG LLNE FE VE L+QPTFV DYPIEISPLA+ HR GL ERFELFI GRE
Sbjct: 352 AADSVGRLLNEAFEQRVEASLIQPTFVTDYPIEISPLARKHRSKPGLVERFELFIVGRET 411
Query: 479 ANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVT 538
ANAFSEL DP+DQR RLE Q ++AA E LD+DFV
Sbjct: 412 ANAFSELIDPVDQRQRLEAQ----QARKAAGDLEAQG----------------LDEDFVH 451
Query: 539 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
ALE GMPP G+G+GIDRLVMLLT+S SIRDVIAFP+++
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMR 490
>sp|A8G7C4|SYK_PROM2 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9215)
GN=lysS PE=3 SV=1
Length = 512
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/525 (51%), Positives = 365/525 (69%), Gaps = 42/525 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ R++K L SKG YA + +++ + L + + +L NG+E++ VSVAGRV+
Sbjct: 4 IKEARLQKARSLVSKGFASYAQSFKVSNTTSFLLQEFDYLENGQEADFS---VSVAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYC---------EKERLLSDQFDQLKVFVDIGDILGVSG 172
A+R GK+AF T+ D G IQLY EK++LLS F+ +K VDIGD +GV G
Sbjct: 61 AKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYG 118
Query: 173 SMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRK 232
++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+
Sbjct: 119 TIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKT 178
Query: 233 RAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKR 292
RAK +S IRK +++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKR
Sbjct: 179 RAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKR 238
Query: 293 MLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVN 352
M++GGFEK+YE+GRIFRNEG+STRHNPEFT++E+YEAYSDY MMN+TEE++
Sbjct: 239 MVVGGFEKVYEMGRIFRNEGISTRHNPEFTSVEIYEAYSDYFDMMNLTEELIKDVVADSC 298
Query: 353 GKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENK 412
G L I+YQ EI +PW R +M ++VK+ TGIDF+ D AK+ ++ + L NK
Sbjct: 299 GSLIINYQNKEIDFSKPWLRISMKDIVKKYTGIDFDSFSGDFLAAKQ-AVKNINVDLSNK 357
Query: 413 DKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELF 472
++G LLNEVFE VE KL++PTFV+DYP+EISPLA+PH + + +RFELF
Sbjct: 358 -------VNTMGRLLNEVFEQKVESKLIEPTFVIDYPVEISPLARPHFDNKEIVQRFELF 410
Query: 473 ICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTL 532
I GRE+ANAFSEL DP+DQR R++ Q+ L++ D +
Sbjct: 411 IVGRELANAFSELIDPVDQRERMQ-------------------LQQSLRDEGDLEAH-CI 450
Query: 533 DDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
D+DF+ ALE GMPP G+G+GIDRL+ML+TNSASIRDVI FP+LK
Sbjct: 451 DEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPLLK 495
>sp|A2BZ03|SYK_PROM5 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9515)
GN=lysS PE=3 SV=1
Length = 512
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/527 (51%), Positives = 366/527 (69%), Gaps = 46/527 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R+ K L +KG EPYA + +HS L E + +L NG+E + +VS+AGRV+
Sbjct: 4 IREARLLKANSLINKGFEPYAETFKISHSTRFLNEKFGYLDNGQEFDL---NVSLAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSD--------QFDQLKVFVDIGDILGVSGS 173
A+R GK+AF T+ D G IQLY EK R++ D F+ LK VDIGD +GV G+
Sbjct: 61 AKRVMGKIAFFTITDQEGKIQLYLEK-RIIDDYEINAKLLSFEDLKEIVDIGDWIGVFGT 119
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
+K+T KGELS+ V+ + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P VF+ R
Sbjct: 120 IKKTNKGELSIKVSKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPLSKTVFKTR 179
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
AK +S IR+ ++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKRM
Sbjct: 180 AKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKRM 239
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFEK+YE+GRIFRNEG+ST+HNPEFT++E+Y+A+S+Y MMN+TE+++ + L+
Sbjct: 240 VVGGFEKVYELGRIFRNEGVSTKHNPEFTSVEIYQAFSNYIDMMNLTEDLIKNIVLSCCD 299
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
L I+YQ I +PW+R +M N+VKE TGIDF+ DL AK+ + +
Sbjct: 300 SLVINYQDKVIDFSKPWKRISMKNVVKEYTGIDFDSFDGDLNKAKKFS-----------E 348
Query: 414 KFVIESSPSV---GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
+ IE SP + G LLNEVFE VE +L++PTFV DYPIEISPLA+ H ++ + +RFE
Sbjct: 349 EINIEISPKINTLGRLLNEVFEQKVESQLIEPTFVTDYPIEISPLARRHPKNKEMVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE+ANAFSEL DP+DQR R++ Q+ L+++ D
Sbjct: 409 LFIAGRELANAFSELIDPVDQRQRMQ-------------------LQQSLRDAGDLEAHC 449
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE GMPP G+G+GIDRLVMLLTNS+SIRDVI FP+LK
Sbjct: 450 -IDEDFLQALEIGMPPTGGLGIGIDRLVMLLTNSSSIRDVIPFPLLK 495
>sp|Q7UZP0|SYK_PROMP Lysine--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=lysS PE=3 SV=1
Length = 512
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/527 (51%), Positives = 364/527 (69%), Gaps = 46/527 (8%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
+R R+ K L KG EPYA + THS L E + +L NG++ N + V++AGRV+
Sbjct: 4 IREARLLKANSLVKKGFEPYAETFKITHSTKFLTEKFGYLENGQDFNLD---VAIAGRVL 60
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSD--------QFDQLKVFVDIGDILGVSGS 173
A+R GK+AF T+ D G IQLY EK ++L D F+ LK VDIGD +GV G+
Sbjct: 61 AKRVMGKIAFYTIADQEGKIQLYLEK-KILDDFEIHAKLLSFEDLKEIVDIGDWIGVYGT 119
Query: 174 MKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKR 233
+K+T KGELS+ V+ + +L+KSL PLPDK+HGLTD++KRYRQRY+D+I P +VF+ R
Sbjct: 120 IKKTNKGELSIKVSKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPLSKNVFKTR 179
Query: 234 AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM 293
AK +S IR+ ++ F+E+ETP+LQ AGGAEARPF+T+HN+L LYLRIATELHLKRM
Sbjct: 180 AKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTLDIPLYLRIATELHLKRM 239
Query: 294 LIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNG 353
++GGFEK+YE+GRIFRNEG+ST+HNPEFT++E+Y+A+S+Y MMN+TE+++ L+
Sbjct: 240 VVGGFEKVYELGRIFRNEGISTKHNPEFTSVEIYQAFSNYIDMMNLTEDLIRDIVLSCCD 299
Query: 354 KLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKD 413
L I+YQ I +PW+R +M ++V E TGIDF+ DL +A+ D E+
Sbjct: 300 SLIINYQEKVIDFSKPWKRISMKDVVMEYTGIDFDSFNGDLN-------KAMKDLEESN- 351
Query: 414 KFVIESSPSV---GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFE 470
IE SP + G LLNEVFE VE +LV+PTFV+DYPIEISPLA+PH + + +RFE
Sbjct: 352 ---IEISPKINTLGRLLNEVFEEKVESQLVEPTFVIDYPIEISPLARPHPENKEMVQRFE 408
Query: 471 LFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEV 530
LFI GRE+ANAFSEL DP+DQR R++ Q+ L+++ D
Sbjct: 409 LFIAGRELANAFSELIDPVDQRKRMQ-------------------LQQSLRDAGDLEAH- 448
Query: 531 TLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALE GMPP G+G+GIDRL+MLLTNS SIRDVI FP+LK
Sbjct: 449 CIDEDFLQALEIGMPPTGGLGIGIDRLIMLLTNSPSIRDVITFPLLK 495
>sp|Q7NG18|SYK_GLOVI Lysine--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421)
GN=lysS PE=3 SV=1
Length = 497
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 274/522 (52%), Positives = 356/522 (68%), Gaps = 37/522 (7%)
Query: 60 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGR 119
E +R R++K E+ R PY Y+++RTH A LQ Y+ L NG+E D VSVAGR
Sbjct: 4 EDLRRTRLEKAEQWRVHNQNPYPYRYERTHMAGDLQAKYKDLENGQEVE---DAVSVAGR 60
Query: 120 VVARRAFGKLAFLTLRDDSGTIQLYCEKERLL----SDQFDQLKVFVDIGDILGVSGSMK 175
+VARR G +AF L+DDSGTIQLY +K+R+ +D F L D GD +G G+++
Sbjct: 61 IVARRVLGSVAFFGLQDDSGTIQLYFDKKRIRESMGADAFKWLDKLTDTGDFIGAHGTIR 120
Query: 176 RTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAK 235
RTE+GELSV V+ + +L KS+LPLP +Y+GLTDV KRYRQRY+D+I+ P V + FRKRA
Sbjct: 121 RTERGELSVYVHEYELLCKSILPLPSEYYGLTDVQKRYRQRYLDLIANPGVRETFRKRAL 180
Query: 236 IVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLI 295
IV EIR+ ++ GF+E+ETPVLQ AGGA ARPF T+HN+LG D++LRIATELHLKR+++
Sbjct: 181 IVREIRRFLDERGFLEIETPVLQTEAGGAAARPFTTHHNALGLDMFLRIATELHLKRLVV 240
Query: 296 GGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKL 355
GGFEK+YE+GRIFRNEG+STRHNPEFTT+E+YEAYSDY +M++ E ++ A V G
Sbjct: 241 GGFEKVYELGRIFRNEGISTRHNPEFTTVEIYEAYSDYFDIMDLVETLLRAVAHIVLGST 300
Query: 356 TIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKF 415
+ +G I L P+RR TM +LV + TG+ L + K A+ A G+E
Sbjct: 301 ELVCEGNTIDLGAPFRRITMFDLVAQMTGVALAGLRDGEKAAR----LAEAVGVE----- 351
Query: 416 VIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICG 475
+ + SVG +L ++FE E KL QPTFVLDYP+EISPLAK HR + ERFEL+I G
Sbjct: 352 -VTAGASVGQILYQLFEEKCEAKLTQPTFVLDYPVEISPLAKAHRSVPNMVERFELYING 410
Query: 476 REMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDD 535
RE A+ FSEL DP+DQRARLE AQ K K + D D+D
Sbjct: 411 RETADGFSELNDPVDQRARLE-------------------AQAKAKAAGDLEAH-PFDED 450
Query: 536 FVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
F+TA+E+G+PP G+G+GIDRLVMLLT+S SIRDVIAFP L+
Sbjct: 451 FLTAIEHGLPPTGGVGIGIDRLVMLLTDSPSIRDVIAFPTLR 492
>sp|Q3A9M2|SYK_CARHZ Lysine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=lysS PE=3 SV=1
Length = 488
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/515 (49%), Positives = 352/515 (68%), Gaps = 43/515 (8%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R++K+ ELR G+EPY K++RTH+A ++ + + L + V +AGR++A+R
Sbjct: 12 VRLEKLSELRKMGIEPYGGKFERTHTAKEILDNFEQLVD--------KTVKIAGRIMAKR 63
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGEL 182
GK +F ++D SG IQ+Y + L D + K+F +DIGDI+GV+G + +T+KGE+
Sbjct: 64 GHGKASFAHIQDMSGKIQIYARQNELGIDAY---KLFEKLDIGDIIGVTGHVFKTQKGEI 120
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
+V ++SF IL KSL PLP+K+HGLTDV+ RYRQRYVD+I PEV + F R++IV IR+
Sbjct: 121 TVWLSSFEILAKSLRPLPEKWHGLTDVELRYRQRYVDLIVNPEVRETFILRSRIVKTIRE 180
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
++ GF+EVETP++ AGGA ARPF+T+HN+L LYLRIA EL+LKR+L+GGFEK+Y
Sbjct: 181 FLDQKGFLEVETPMMHPIAGGAAARPFITHHNALDMKLYLRIAPELYLKRLLVGGFEKVY 240
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EI R FRNEG+ST+HNPEFT +E+Y+AY+DY MM+ITEE++TH A V G L I YQG
Sbjct: 241 EINRNFRNEGISTKHNPEFTMLELYQAYADYHDMMDITEELITHVAEKVLGTLEITYQGT 300
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
I L RPW+R M ++EATG+DF + + ++ + + LG +E
Sbjct: 301 PINLHRPWKRIPMLKAIEEATGVDFAGVKDPVQAYAKA--KELG--------VPVEEGMG 350
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G ++ VFE VEP L+ PTFV+DYP+E+SPLAK + + LT RFELFI GREMANAF
Sbjct: 351 WGEIITAVFEEKVEPTLINPTFVIDYPVEVSPLAKRQKENPDLTYRFELFIYGREMANAF 410
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ+ R +Q+ E RA E +D+D++TALEY
Sbjct: 411 SELNDPIDQKERFLKQL----EARAKGNEEAH----------------MMDEDYITALEY 450
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPPA G+G+GIDRLVMLLT+ ASIRDVI FP+++
Sbjct: 451 GMPPAGGLGIGIDRLVMLLTDQASIRDVILFPLMR 485
>sp|A5D5Q4|SYK_PELTS Lysine--tRNA ligase OS=Pelotomaculum thermopropionicum (strain DSM
13744 / JCM 10971 / SI) GN=lysS PE=3 SV=1
Length = 506
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/528 (49%), Positives = 354/528 (67%), Gaps = 41/528 (7%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
+S D + +R +K+ ELR KG+EPY +++RTH+A + + + + EN
Sbjct: 15 ASGREEDLNELMRVRREKLAELRDKGIEPYGGRFERTHTARYILDNFVEM--------EN 66
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V +AGR+++RR GK F ++D +G IQ+Y + + + +L +DIGDI+GV
Sbjct: 67 RPVVIAGRIMSRRGMGKATFAHIQDGTGQIQIYVRLNDVGPESY-ELFGRLDIGDIIGVQ 125
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
GS+ +T GE++V SF IL+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV +VF
Sbjct: 126 GSVFKTRMGEITVAAESFKILSKSLRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKEVFE 185
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+KI+ R ++ GF+EVETP++Q GGA ARPF+T+HN+L DLYLRIA EL+LK
Sbjct: 186 TRSKIIRACRNFLDGKGFLEVETPMMQVIPGGAAARPFITHHNALDMDLYLRIAPELYLK 245
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+L+GGFEK+YEI R FRNEG+ST+HNPEFT +E+Y+AY+DY MMN+TEE+++ A+
Sbjct: 246 RLLVGGFEKVYEINRNFRNEGISTKHNPEFTMLELYQAYADYTDMMNLTEELISAVAVEA 305
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKET--TLRALGDGL 409
G I+YQG EI L PW R M +K G+DF LK A+E + G GL
Sbjct: 306 LGTTKIEYQGTEIDLAPPWPRIPMLETIKVHAGLDFGA----LKSAEEAFKAVEQAGIGL 361
Query: 410 ENKDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERF 469
E ++ S S G ++N+VFE VVEPKL+QPTFV+DYP+EISPLAK LT RF
Sbjct: 362 E------LDPSDSWGTIVNKVFEEVVEPKLIQPTFVVDYPVEISPLAKRKAEDPELTYRF 415
Query: 470 ELFICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYE 529
ELFI GRE+ANAFSEL DP+DQ+ R +QV EK K D+ ++
Sbjct: 416 ELFIYGREIANAFSELNDPIDQKGRFLKQV------------------EKRKAGDEEAH- 456
Query: 530 VTLDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+D++ ALEYGMPPA G+G+GIDRLVMLLTNSASIRDVI FP++K
Sbjct: 457 -MMDEDYINALEYGMPPAGGLGIGIDRLVMLLTNSASIRDVILFPLMK 503
>sp|Q0B0N3|SYK_SYNWW Lysine--tRNA ligase OS=Syntrophomonas wolfei subsp. wolfei (strain
Goettingen) GN=lysS PE=3 SV=1
Length = 493
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/516 (47%), Positives = 350/516 (67%), Gaps = 39/516 (7%)
Query: 62 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVV 121
++ +R++K+ EL+ G+EP+ +++R A ++E + L E +++AGR++
Sbjct: 11 LKKVRLEKLAELKEMGIEPFGRRFERDSMAQNIKEAFSEL--------EGKTIAIAGRIM 62
Query: 122 ARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGE 181
++R GK F L D SG+IQLY ++ L ++++ K +DIGDILG+ G + RT+KGE
Sbjct: 63 SKRRHGKAGFANLADLSGSIQLYFRQDDLGPEKYELYKK-LDIGDILGIQGEVFRTQKGE 121
Query: 182 LSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIR 241
+S+ V L+KSL PLP+K+HGL DV+ RYRQRYVD+I PEV +VF KR++I+ E+R
Sbjct: 122 ISIHVRDLYYLSKSLTPLPEKWHGLKDVELRYRQRYVDLIVNPEVKEVFVKRSRIIKEMR 181
Query: 242 KTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKI 301
++ GF+EVETP++Q GGA ARPF+T+HN+L +LYLRIA EL+LKR+++GG EK+
Sbjct: 182 NYLDDRGFLEVETPMMQPIPGGATARPFITHHNALDMELYLRIAPELYLKRLIVGGLEKV 241
Query: 302 YEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQG 361
YEI R FRNEG+STRHNPEFT +E+Y+AY DY+ MM + E++++ L VNG + ID++G
Sbjct: 242 YEINRNFRNEGISTRHNPEFTMLEIYQAYGDYEVMMQLCEDLISAVMLKVNGSMQIDFEG 301
Query: 362 VEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSP 421
++ PWRR TM + +KEA G+DF+ + +D ++ A GLE +++
Sbjct: 302 EQLDFTPPWRRVTMLDAIKEAAGLDFSLIKSD----EDACQAAWQLGLE------VKAGA 351
Query: 422 SVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANA 481
S G L+NE+FE VE KL+QPTFV +P+E+SPLAK + T+RFELFI RE+ANA
Sbjct: 352 SRGELINEIFEQFVEDKLIQPTFVYGHPVEVSPLAKRNLETPEFTDRFELFIMQREIANA 411
Query: 482 FSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALE 541
FSEL DP+DQ+ R +QV EKRA +E +D+D++ ALE
Sbjct: 412 FSELNDPIDQKERFIKQV----EKRAGGDAEAH----------------MMDEDYINALE 451
Query: 542 YGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
YGMPPA GMG+GIDRLVML+T S SIRDVI FP L+
Sbjct: 452 YGMPPAGGMGIGIDRLVMLMTGSPSIRDVILFPTLR 487
>sp|Q8EU10|SYK_OCEIH Lysine--tRNA ligase OS=Oceanobacillus iheyensis (strain DSM 14371 /
JCM 11309 / KCTC 3954 / HTE831) GN=lysS PE=3 SV=1
Length = 493
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/515 (48%), Positives = 339/515 (65%), Gaps = 32/515 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ E KGL+P+ K++R+H A L E Y + EE D V++AGR++ +R
Sbjct: 11 VRRDKLAEHMEKGLDPFGGKFERSHQATDLIEKYDSYSK-EELEETTDEVTIAGRLMTKR 69
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D SG IQLY K+ + D ++ K D+GDI+GV+G M +T GE+SV
Sbjct: 70 GKGKAGFAHIQDLSGQIQLYVRKDMIGDDAYEVFKS-ADLGDIVGVTGVMFKTNVGEISV 128
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLP+KYHGL D+++RYRQRY+D+I+ P+ F R+KI+ +R+ +
Sbjct: 129 KAKQFQLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNPDSRGTFVSRSKIIQSMREYL 188
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
GF+EVETP++ GGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 189 NGQGFLEVETPMMHSIPGGASARPFITHHNALDIELYMRIAIELHLKRLMVGGLEKVYEI 248
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY +M +TE +V H A V+G TI Y EI
Sbjct: 249 GRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMELTENLVAHIAKQVHGSTTITYGEHEI 308
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R + + VK+ATG+DF K + RAL + + S S G
Sbjct: 309 NLEPKWTRLHIVDAVKDATGVDF------WKEVSDEEARALA----KEHGVQVTESMSYG 358
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L+QPTF+ +P+EISPLAK ++ T+RFELFI GRE ANAFSE
Sbjct: 359 HVVNEFFEQKVEETLIQPTFIHGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSE 418
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQRAR E QV+ E+ + +D+ Y +D+DF+ ALEYGM
Sbjct: 419 LNDPIDQRARFEAQVK-----------------ERAEGNDEAHY---MDEDFLEALEYGM 458
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQ 579
PP G+G+G+DRLVMLLTNS SIRDV+ FP ++ +
Sbjct: 459 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRTK 493
>sp|Q8CQV5|SYK_STAES Lysine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=lysS PE=3 SV=1
Length = 495
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 348/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ ++++R+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFNRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKE TG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEVTGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q5HRN7|SYK_STAEQ Lysine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=lysS PE=3 SV=1
Length = 495
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 348/517 (67%), Gaps = 38/517 (7%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ ++++R+ ++++L+E + + E E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGHRFNRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+S
Sbjct: 71 RGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEIS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +L+KSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEE 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGND---LKVAKETTLRALGDGLENKDKFVIESS 420
I LE W+R + + VKE TG+DF + +D +++AKE + I +
Sbjct: 310 IDLESSWKRLHIVDAVKEVTGVDFYNVNSDEEAIRLAKEHDIE-------------ITEN 356
Query: 421 PSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMAN 480
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE AN
Sbjct: 357 MKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHAN 416
Query: 481 AFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTAL 540
AF+EL DP+DQR R E A + EK ++ +D +++ +D+D++ AL
Sbjct: 417 AFTELNDPIDQRQRFE-----------AQLVEK-------EQGNDEAHD--MDEDYIEAL 456
Query: 541 EYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
EYGMPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q2RM49|SYK_MOOTA Lysine--tRNA ligase OS=Moorella thermoacetica (strain ATCC 39073)
GN=lysS PE=3 SV=1
Length = 489
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/517 (47%), Positives = 342/517 (66%), Gaps = 39/517 (7%)
Query: 64 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVAR 123
A+R++K+ +L+ G+EPY ++ THS ++E + L E V++AGR++A
Sbjct: 11 AVRLEKLHQLQEAGIEPYGGPFEVTHSTTAIRERFDEL--------EGQEVALAGRLLAI 62
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R+ GK +F L+D G +QLY + + ++ + +DIGDI+GV G + RT +GE+S
Sbjct: 63 RSHGKASFADLQDREGRLQLYIRLDNVGPGIYELFQK-LDIGDIVGVRGKVFRTHRGEIS 121
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V V +L KSL PLP+K+HGL DVD RYRQRY+D+I PEV VF RA+I+ IR
Sbjct: 122 VEVRQLTLLCKSLRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKQVFITRARIIRAIRSF 181
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+++ GF+EVETP + AGGA ARPF+T+HN+L DLYLRIA ELHLKR+L+GG EK+YE
Sbjct: 182 LDNRGFLEVETPTMHPIAGGAAARPFITHHNALDIDLYLRIALELHLKRLLVGGLEKVYE 241
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
+GRIFRNEG+ST+HNPEFT +E+Y+AY+DY MM++ EE+V + A G + YQG
Sbjct: 242 MGRIFRNEGISTKHNPEFTMLELYQAYADYYVMMDLLEEMVAYVAREALGTTVVTYQGDR 301
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
+ L PW R TM +K+ G+DF++ L A++ A+ GLE IE
Sbjct: 302 LDLTPPWPRLTMLEAIKKYYGVDFDQ----LPTAEDARRAAISLGLE------IEPGMER 351
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G ++NEVFE VEP L+QPTF+LDYP+ ISPLAK + + T RFE FI GRE+ANAFS
Sbjct: 352 GKIINEVFEATVEPHLIQPTFILDYPVAISPLAKRKKENPDFTYRFEAFIAGRELANAFS 411
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E Q ++E+++ E+ +D+DF+ ALEYG
Sbjct: 412 ELNDPIDQRRRFEAQ-----------MAERAAGDEEAH---------MMDEDFLQALEYG 451
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
MPPA GMG+GIDRLVM+LT+S SIRDVI FP ++ ++
Sbjct: 452 MPPAGGMGIGIDRLVMVLTDSPSIRDVILFPTMRPKE 488
>sp|Q6GJF4|SYK_STAAR Lysine--tRNA ligase OS=Staphylococcus aureus (strain MRSA252)
GN=lysS PE=3 SV=1
Length = 495
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 342/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q ++EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LAEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q4L3H5|SYK_STAHJ Lysine--tRNA ligase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=lysS PE=3 SV=1
Length = 496
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/514 (46%), Positives = 347/514 (67%), Gaps = 31/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ +++R+ +A++L+ + + E + E++ HVS+AGR++ +
Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERSATASELKSQWDEFSKEELHDKEDESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ + FD L D+GDI+G+ G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLTGQIQIYVRKDQIGEEDFDNLWKGADLGDIVGIEGVMFKTNTGELS 130
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V +F +L+K+L PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 131 VKAKTFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFINRSKIIQEMRNY 190
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 191 LNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 250
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y E
Sbjct: 251 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNEEE 310
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF ++ +D +E A G+E I ++
Sbjct: 311 IDLESAWTRLHIVDAVKEATGVDFYQIKSD----EEAIAAAKEHGIE------ITNNMKY 360
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +PIEISPLAK + T+RFELFI GRE ANAF+
Sbjct: 361 GHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 420
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQR R E A + EK+ + +D ++E +D+D++ ALEYG
Sbjct: 421 ELNDPIDQRERFE-----------AQLVEKA-------QGNDEAHE--MDEDYIEALEYG 460
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 461 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 494
>sp|P67610|SYK_STAAN Lysine--tRNA ligase OS=Staphylococcus aureus (strain N315) GN=lysS
PE=1 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|P67609|SYK_STAAM Lysine--tRNA ligase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=lysS PE=1 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q5HIF7|SYK_STAAC Lysine--tRNA ligase OS=Staphylococcus aureus (strain COL) GN=lysS
PE=3 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q2YVW8|SYK_STAAB Lysine--tRNA ligase OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=lysS PE=3 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q2G0Q3|SYK_STAA8 Lysine--tRNA ligase OS=Staphylococcus aureus (strain NCTC 8325)
GN=lysS PE=3 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q2FJC3|SYK_STAA3 Lysine--tRNA ligase OS=Staphylococcus aureus (strain USA300)
GN=lysS PE=3 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|A7WYS8|SYK_STAA1 Lysine--tRNA ligase OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=lysS PE=3 SV=1
Length = 495
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 341/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q8NXZ0|SYK_STAAW Lysine--tRNA ligase OS=Staphylococcus aureus (strain MW2) GN=lysS
PE=3 SV=1
Length = 495
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----DEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q6GBX1|SYK_STAAS Lysine--tRNA ligase OS=Staphylococcus aureus (strain MSSA476)
GN=lysS PE=3 SV=1
Length = 495
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----DEAKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE ANAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q53638|SYK_STAAU Lysine--tRNA ligase OS=Staphylococcus aureus GN=lysS PE=3 SV=1
Length = 495
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/514 (47%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSVAGRVVAR 123
+R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV++AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V F +LTKSL PLPDK+HGL D+++RYRQRY+D+I+ + F R+KI+ E+R
Sbjct: 130 VKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ + GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M++TE +V H A V G + Y G
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W R + + VKEATG+DF E+ +D +E A G+E KD +
Sbjct: 310 IDLESAWTRLHIVDAVKEATGVDFYEVKSD----EERKALAKEHGIEIKD------TMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTF+ +P EISPLAK + T+RFELFI GRE AN F+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANRFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQ+ R E Q + EK+ ++ E +D+D++ ALEYG
Sbjct: 420 ELNDPIDQKGRFEAQ-----------LVEKAQGNDEAHE---------MDEDYIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+S SIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 493
>sp|Q839A8|SYK_ENTFA Lysine--tRNA ligase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=lysS PE=3 SV=1
Length = 498
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/513 (46%), Positives = 341/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VSVAGR++ +R
Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKR 76
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V
Sbjct: 77 GKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTV 135
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
+ +LTK+L PLPDKYHGLT+V++RYRQRY+D+IS E D F KR++I+SEIR+ +
Sbjct: 136 KAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYL 195
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G+VEVETPVL AGGA ARPF+T+HN+L DLYLRIA ELHLKR+++GG EK+YEI
Sbjct: 196 DGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELHLKRLIVGGMEKVYEI 255
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+ T HNPEFT +E Y AY+DYQ +M++TE I+ + A V G I Y G +
Sbjct: 256 GRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAV 315
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L P++R M + VKE TG+DF +E T+ L + I + +VG
Sbjct: 316 DLGSPFKRLHMVDAVKEQTGVDF---------WQEMTIEE-ARALAKEHNVEITDAMTVG 365
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE L QPTF+ +P+ +SPLAK + T+RFELFI G+E ANAF+E
Sbjct: 366 HIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTE 425
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R EEQ ++ ++ +D ++ V D+DF+ ALEYG+
Sbjct: 426 LNDPIDQRERFEEQEKER------------------EQGNDEAHGV--DEDFIEALEYGL 465
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLT++ SIRDV+ FP ++
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 498
>sp|Q49V26|SYK_STAS1 Lysine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=lysS
PE=3 SV=1
Length = 495
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/514 (48%), Positives = 340/514 (66%), Gaps = 32/514 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDH-VSVAGRVVAR 123
+R +K++EL G++P+ K+DRT A L E + + E E + VS+AGR++ +
Sbjct: 11 VRRQKLQELYDLGIDPFGQKFDRTSMATPLHEDWDQFSKEELHEKEEESHVSIAGRLMTK 70
Query: 124 RAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELS 183
R GK F ++D SG IQ+Y K+++ DQF + D+GDI+GV G M +T GELS
Sbjct: 71 RGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQF-AIWNSADLGDIVGVEGVMFKTNTGELS 129
Query: 184 VLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKT 243
V SF +LTK+L PLPDK+HGL D+++RYRQRY+D+I+ + F KR+KI+ E+R
Sbjct: 130 VKAQSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFIKRSKILQEMRNY 189
Query: 244 VESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYE 303
+ GF+EVETP++ AGGA ARPFVT+HN+L LY+RIA ELHLKR+++GG EK+YE
Sbjct: 190 LNQQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYE 249
Query: 304 IGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVE 363
IGR+FRNEG+STRHNPEFT IE+YEAY+DY +M+ITE ++ H + V G + Y
Sbjct: 250 IGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDITENMIRHISEKVLGTAKVTYGEET 309
Query: 364 ICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSV 423
I LE W+R M + VKE TG+DF + +D ++ + A G+E I +
Sbjct: 310 IDLESKWKRIHMADAVKEETGVDFFNIQSD----EDAKIAAKEHGIE------ITDNMKY 359
Query: 424 GNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFS 483
G++LNE FE VE L+QPTFV +PIEISPLAK + T+RFELFI GRE NAF+
Sbjct: 360 GHILNEFFEQKVEETLIQPTFVYGHPIEISPLAKKNAEDPRFTDRFELFIVGREHGNAFT 419
Query: 484 ELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYG 543
EL DP+DQRAR E Q+ + ++ +D ++E +D+DF+ ALEYG
Sbjct: 420 ELNDPIDQRARFEAQLVEK------------------EQGNDEAHE--MDEDFIEALEYG 459
Query: 544 MPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
MPP G+G+GIDRLVMLLT+SASIRDV+ FP ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDSASIRDVLLFPYMR 493
>sp|A7HM68|SYK_FERNB Lysine--tRNA ligase OS=Fervidobacterium nodosum (strain ATCC 35602
/ DSM 5306 / Rt17-B1) GN=lysS PE=3 SV=1
Length = 509
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 347/515 (67%), Gaps = 38/515 (7%)
Query: 63 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVA 122
R RIK+++ELR+ G+ PY Y +++TH+ +++ + HL+NGE ++ VS AGR+++
Sbjct: 6 REARIKEIDELRNLGINPYPYSYNKTHTTEDIKKQFEHLSNGEVTDK---RVSTAGRIMS 62
Query: 123 RRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGEL 182
R GK AF ++D G IQ Y K++ ++ ++ K V +GDI+GV G + ++ GE+
Sbjct: 63 IREHGKSAFFHIKDTYGRIQAYIRKDK--TENYEFFKERVTVGDIVGVEGIVFKSNTGEI 120
Query: 183 SVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRK 242
++LV F +L K L P+P+K+HG+ D + YRQRYVDMI+ E FR R+ I+ IR+
Sbjct: 121 TILVEKFELLVKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDETIKRFRMRSDIIRMIRE 180
Query: 243 TVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIY 302
+ GF EVETP+LQ GGA ARPF+T+ N+L D+YLRIATELHLKR ++GGF+K+Y
Sbjct: 181 FLTKKGFFEVETPILQYLTGGASARPFITHLNALDIDMYLRIATELHLKRFIVGGFDKVY 240
Query: 303 EIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGV 362
EIG+IFRNEG+S +H+PEFT+IE+Y+AY+DY+ MMN+TEE++T+ + G I YQG
Sbjct: 241 EIGKIFRNEGISYKHHPEFTSIELYQAYADYEDMMNLTEELITYLVEQLYGTTKITYQGQ 300
Query: 363 EICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPS 422
EI RPWRR M + +KE G+D ++ + ET + L EN + I
Sbjct: 301 EIDFTRPWRRVKMRDFIKENLGVDI------IEDSDETMAKVLA---ENGVEVDINDR-- 349
Query: 423 VGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAF 482
G+++ +++++ VE K++QPTF+L++P+EISPLAK HR +TERFEL I GREMANAF
Sbjct: 350 -GHMIEKLWDL-VEDKVIQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAF 407
Query: 483 SELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEY 542
SEL DP+DQ R Q+R L++ D ++ LD DFV ALEY
Sbjct: 408 SELNDPVDQLERFMNQLR-------------------LRDLGDQEAQM-LDKDFVRALEY 447
Query: 543 GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
GMPP G+G+GIDRLVMLLT+SA+IRDVIAFP+++
Sbjct: 448 GMPPTGGLGIGIDRLVMLLTDSANIRDVIAFPLVR 482
>sp|Q9RHV9|SYK_GEOSE Lysine--tRNA ligase OS=Geobacillus stearothermophilus GN=lysS PE=1
SV=1
Length = 494
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/526 (45%), Positives = 351/526 (66%), Gaps = 35/526 (6%)
Query: 52 SSTSTSDREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEN 111
S +D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE +
Sbjct: 2 SHEELNDQLRVRREKLKKIEEL---GVDPFGKRFERTHKAEELFELYGDLSK-EELEEQQ 57
Query: 112 DHVSVAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVS 171
V+VAGR++ +R GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV
Sbjct: 58 IEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKI-SDLGDIVGVR 116
Query: 172 GSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFR 231
G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D+I PE F
Sbjct: 117 GTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFI 176
Query: 232 KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK 291
R+ I+ +R+ ++S G++EVETP++ AGGA ARPF+T+HN+L LY+RIA ELHLK
Sbjct: 177 TRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLK 236
Query: 292 RMLIGGFEKIYEIGRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAV 351
R+++GG EK+YEIGR+FRNEG+STRHNPEFT +E+YEAY+D++ +M +TE ++ H A V
Sbjct: 237 RLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEV 296
Query: 352 NGKLTIDYQGVEICLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLEN 411
G I Y + L WRR M + +KE G+DF +D +E A G+E
Sbjct: 297 LGTTKIQYGEHLVDLTPEWRRLHMVDAIKEYVGVDFWRQMSD----EEARELAKEHGVE- 351
Query: 412 KDKFVIESSPSVGNLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFEL 471
+ + G+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFEL
Sbjct: 352 -----VAPHMTFGHIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFEL 406
Query: 472 FICGREMANAFSELTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVT 531
FI GRE ANAF+EL DP+DQR R EEQ+++ ++ +D ++E
Sbjct: 407 FIVGREHANAFTELNDPIDQRQRFEEQLKER------------------EQGNDEAHE-- 446
Query: 532 LDDDFVTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
+D+DF+ ALEYGMPP G+G+G+DRLVMLLTNS SIRDV+ FP ++
Sbjct: 447 MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMR 492
>sp|A7GJY9|SYK_BACCN Lysine--tRNA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH
391-98) GN=lysS PE=3 SV=1
Length = 499
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/516 (45%), Positives = 344/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RTHS+ +L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTHSSKELLNLYGEFSK-EELEEKAISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTKSL PLPDKYHGL D+++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATSFTLLTKSLRPLPDKYHGLKDIEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHTIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE ++ H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEHEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +K+ G+DF K RAL + I+ + VG
Sbjct: 313 NLEPEWTRLHMVDAIKQYCGVDF------WKPMSVEEARALA----KEHDVEIKDTMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEEKLIQPTFIYGHPVEISPLAKKNDEDSRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTNS SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMRHKQ 498
>sp|P37477|SYK_BACSU Lysine--tRNA ligase OS=Bacillus subtilis (strain 168) GN=lysS PE=3
SV=1
Length = 499
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 339/513 (66%), Gaps = 32/513 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R K+ +LR G++P+ +++RTH + ++ Y+ L EE + V++AGR++ +R
Sbjct: 17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKR 75
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F L+D G IQ+Y K+ + DQ++ K D+GD++GV+G + +T GELSV
Sbjct: 76 GKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKS-SDLGDLIGVTGKVFKTNVGELSV 134
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
SF +LTK+L PLPDKYHGL DV++RYRQRY+D+I P+ F R+KI+ +R+ +
Sbjct: 135 KATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYL 194
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP + GGA ARPF+T+HN+L LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 195 DDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEI 254
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M++TE +V H A V G TI Y +I
Sbjct: 255 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQI 314
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
L+ W+R M + VKEATG+DF E E T+ + + + I+ S +VG
Sbjct: 315 DLKPEWKRIHMVDAVKEATGVDFWE---------EVTVEQARE-YAKEHEVEIKDSMTVG 364
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE +E L+QPTF+ +P+EISPLAK + T+RFELFI GRE ANAF+E
Sbjct: 365 HIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTE 424
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQR R E Q+++ R A E +D+DFV ALEYGM
Sbjct: 425 LNDPIDQRERFEAQLKE----REAGNDEAH----------------LMDEDFVEALEYGM 464
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILK 577
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++
Sbjct: 465 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMR 497
>sp|B7HPY8|SYK_BACC7 Lysine--tRNA ligase OS=Bacillus cereus (strain AH187) GN=lysS PE=3
SV=1
Length = 499
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
>sp|Q73FD1|SYK_BACC1 Lysine--tRNA ligase OS=Bacillus cereus (strain ATCC 10987) GN=lysS
PE=3 SV=1
Length = 499
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/516 (46%), Positives = 345/516 (66%), Gaps = 32/516 (6%)
Query: 65 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSVAGRVVARR 124
+R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS+AGR++ +R
Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKR 73
Query: 125 AFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSV 184
GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV
Sbjct: 74 GKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSV 132
Query: 185 LVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMISKPEVADVFRKRAKIVSEIRKTV 244
F +LTKSL PLPDKYHGL DV++RYRQRY+D+I+ E + F R+KI+ E+R+ +
Sbjct: 133 KATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYL 192
Query: 245 ESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLIGGFEKIYEI 304
+ G++EVETP++ AGGA ARPF+T+HN+L +LY+RIA ELHLKR+++GG EK+YEI
Sbjct: 193 DDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEI 252
Query: 305 GRIFRNEGLSTRHNPEFTTIEMYEAYSDYQSMMNITEEIVTHCALAVNGKLTIDYQGVEI 364
GR+FRNEG+STRHNPEFT IE+YEAY+DY+ +M +TE +V H A V G TI Y EI
Sbjct: 253 GRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEI 312
Query: 365 CLERPWRRETMHNLVKEATGIDFNELGNDLKVAKETTLRALGDGLENKDKFVIESSPSVG 424
LE W R M + +KE +G DF N + V + L A +E KD + VG
Sbjct: 313 NLEPEWTRLHMVDAIKEHSGADF---WNPMSVEEAREL-AKEHNVEIKD------TMEVG 362
Query: 425 NLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGREMANAFSE 484
+++NE FE VE KL+QPTF+ +P+EISPLAK + T+RFELFI RE ANAF+E
Sbjct: 363 HIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTE 422
Query: 485 LTDPLDQRARLEEQVRQHNEKRAAAVSEKSSAQEKLKESDDHSYEVTLDDDFVTALEYGM 544
L DP+DQ+ R E Q+++ ++ +D ++ +DDD++ ALEYGM
Sbjct: 423 LNDPIDQKERFEAQLKER------------------EQGNDEAH--MMDDDYIEALEYGM 462
Query: 545 PPASGMGLGIDRLVMLLTNSASIRDVIAFPILKIQQ 580
PP G+G+GIDRLVMLLTN+ SIRDV+ FP ++ +Q
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,780,166
Number of Sequences: 539616
Number of extensions: 8380364
Number of successful extensions: 35750
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 30403
Number of HSP's gapped (non-prelim): 2642
length of query: 580
length of database: 191,569,459
effective HSP length: 123
effective length of query: 457
effective length of database: 125,196,691
effective search space: 57214887787
effective search space used: 57214887787
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)