BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008043
(579 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 102/171 (59%), Gaps = 20/171 (11%)
Query: 327 DSISDRLDFIGINYYGQEVVS--GPGLKLV-------ETDEYSESGRGV-------YPDG 370
D + RLD+IG+NYY ++VV G G ++V E + S +GR YP+G
Sbjct: 305 DDLKGRLDWIGVNYYTRQVVRARGSGYEIVPGYGHGCEPNGVSPAGRPCSDFGWEFYPEG 364
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
L+ VL ++ +RY +LP ++TENG++DE D R Y++ H+ V+ A+ GV VIGYL
Sbjct: 365 LYNVLKEYWDRY---HLPLLVTENGIADEGDYQRPYYLVSHVYQVHRALQDGVNVIGYLH 421
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTRE 481
W+++DN+EWA G+ +FGL+ VD + RPS ++ ++ + +T E
Sbjct: 422 WSLADNYEWASGFSKRFGLLMVDYSTKRLHW-RPSAFIYREIAKSRAITDE 471
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 23/105 (21%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP---------AE------------ 223
PE +W + A+ G++ R+G++WSRI P AE
Sbjct: 53 PENGPGYWGNYRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVS 112
Query: 224 --PVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266
+ L + N A+ Y+ + + +RS G+ +L L+H LP W
Sbjct: 113 EGALEQLDKMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLW 157
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
Query: 325 YVDSISDRLDFIGINYY----------------GQEVVSGPGLKLVETDEYSESGRGVYP 368
Y +++RLD++G+NYY G + PG + S+ G VYP
Sbjct: 305 YRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYP 364
Query: 369 DGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGY 428
+GL+ +L + + RY + I+TENGVSD D +R Y++ H+ +V+ A G+PV GY
Sbjct: 365 EGLYLLLKELYNRY---GVDLIVTENGVSDSRDALRPAYLVSHVYSVWKAANEGIPVKGY 421
Query: 429 LFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTRE 481
L W+++DN+EWA G+ KFGLV VD R RPS +F ++ T + E
Sbjct: 422 LHWSLTDNYEWAQGFRQKFGLVMVDFKTK-KRYLRPSALVFREIATHNGIPDE 473
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 24/106 (22%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPA---------------------- 222
PE +W+ + LA+ GV+ R+G++WSRI P
Sbjct: 52 PENGPGYWNLNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDV 111
Query: 223 --EPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266
+ V L E N A+ Y + G K++L L+H LP W
Sbjct: 112 DDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLW 157
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 22/172 (12%)
Query: 327 DSISDRLDFIGINYYGQEVVSGPGLKLVETDEY----------------SESGRGVYPDG 370
D + RLD+IG+NYY + VV G V Y S+ G +P+G
Sbjct: 308 DDLKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEG 367
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
L+ VL ++ RY +L +TENG++D+ D R Y++ H+ V+ A+ +G V GYL
Sbjct: 368 LYDVLTKYWNRY---HLYMYVTENGIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLH 424
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIP-RPSYHLFTKVVTTGKVTRE 481
W+++DN+EWA G+ +FGL+ VD N R+ RPS ++ ++ T G +T E
Sbjct: 425 WSLADNYEWASGFSMRFGLLKVDY--NTKRLYWRPSSLVYREIATNGAITDE 474
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 33/139 (23%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPA---EPVN--------------- 226
PE +W + A+ G+ + RL +WSR P P N
Sbjct: 53 PENGPGYWGNYKTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINE 112
Query: 227 ----GLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW--------AGEY---G 271
L E N AL Y+ I ++S G+ + ++H LP W G++
Sbjct: 113 NELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPS 172
Query: 272 GWKLEKTIDYFMDFTSTST 290
GW +T+ F F++ +
Sbjct: 173 GWLSTRTVYEFARFSAYTA 191
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 20/166 (12%)
Query: 332 RLDFIGINYYGQEVVSGPGLKLV---------ETDEYSESGR-------GVYPDGLFRVL 375
+LD+IG+NYY + V LV E +++SGR +YP+GL +L
Sbjct: 299 KLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLL 358
Query: 376 HQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISD 435
+ Y+ LP IITENG++D D R Y++ HL AVY AM G V GYL W+++D
Sbjct: 359 KYLNNAYE---LPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTD 415
Query: 436 NWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTRE 481
N+EWA G+ +FGLV VD R RPS +F ++ T ++ E
Sbjct: 416 NYEWAQGFRMRFGLVYVDFETK-KRYLRPSALVFREIATQKEIPEE 460
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 36/139 (25%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRI------------------------M 220
PE +W + +A+ G+ R GI+W+RI +
Sbjct: 52 PENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDV 111
Query: 221 PAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE----------- 269
P + L++ N ALE Y+ I + + G +L L+H LP W +
Sbjct: 112 PESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDR 171
Query: 270 -YGGWKLEKTIDYFMDFTS 287
GW EKT+ F+ F +
Sbjct: 172 APAGWLDEKTVVEFVKFAA 190
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 22/172 (12%)
Query: 327 DSISDRLDFIGINYYGQEVVSGPGLKLVETDEY----------------SESGRGVYPDG 370
D + RLD+IG+NYY + VV V Y S+ G +P+G
Sbjct: 308 DDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEG 367
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
L+ VL ++ RY +L +TENG++D+ D R Y++ H+ V+ A+ +G V GYL
Sbjct: 368 LYDVLTKYWNRY---HLYMYVTENGIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLH 424
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIP-RPSYHLFTKVVTTGKVTRE 481
W+++DN+EWA G+ +FGL+ VD N R+ RPS ++ ++ T G +T E
Sbjct: 425 WSLADNYEWASGFSMRFGLLKVDY--NTKRLYWRPSALVYREIATNGAITDE 474
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 33/139 (23%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP---AEPVN--------------- 226
PE +W + A+ G+ + RL +WSR P P N
Sbjct: 53 PENGPGYWGNYKTFHDNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINE 112
Query: 227 ----GLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW--------AGEY---G 271
L E N AL Y+ I ++S G+ + ++H LP W G++
Sbjct: 113 NELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPS 172
Query: 272 GWKLEKTIDYFMDFTSTST 290
GW +T+ F F++ +
Sbjct: 173 GWLSTRTVYEFARFSAYTA 191
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 22/172 (12%)
Query: 327 DSISDRLDFIGINYYGQEVVSGPGLKLVETDEY----------------SESGRGVYPDG 370
D + RLD+IG+NYY + VV V Y S+ G +P+G
Sbjct: 308 DDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEG 367
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
L+ VL ++ RY +L +TENG++D+ D R Y++ H+ V+ A+ +G V GYL
Sbjct: 368 LYDVLTKYWNRY---HLYMYVTENGIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLH 424
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIP-RPSYHLFTKVVTTGKVTRE 481
W+++DN+EWA G+ +FGL+ VD N R+ RPS ++ ++ T G +T E
Sbjct: 425 WSLADNYEWASGFSMRFGLLKVDY--NTKRLYWRPSALVYREIATNGAITDE 474
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 33/136 (24%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP---AEPVN--------------- 226
PE +W + A+ G+ + RL ++WSRI P P N
Sbjct: 53 PENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINE 112
Query: 227 ----GLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW--------AGEY---G 271
L E N AL Y+ I ++S G+ +L ++H LP W G++
Sbjct: 113 NELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPS 172
Query: 272 GWKLEKTIDYFMDFTS 287
GW +T+ F F++
Sbjct: 173 GWLSTRTVYEFARFSA 188
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 22/172 (12%)
Query: 327 DSISDRLDFIGINYYGQEVVSGPGLKLVETDEY----------------SESGRGVYPDG 370
D + RLD+IG+NYY + VV V Y S+ G +P+G
Sbjct: 308 DDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEG 367
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
L+ VL ++ RY +L +TENG++D+ D R Y++ H+ V+ A+ +G V GYL
Sbjct: 368 LYDVLTKYWNRY---HLYMYVTENGIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLH 424
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIP-RPSYHLFTKVVTTGKVTRE 481
W+++DN+EWA G+ +FGL+ VD N R+ RPS ++ ++ T G +T E
Sbjct: 425 WSLADNYEWASGFSMRFGLLKVDY--NTKRLYWRPSALVYREIATNGAITDE 474
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 33/136 (24%)
Query: 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP---AEPVN--------------- 226
PE +W + A+ G+ + RL ++WSRI P P N
Sbjct: 53 PENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINE 112
Query: 227 ----GLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWA--------GEY---G 271
L E N AL Y+ I ++S G+ +L ++H LP W G++
Sbjct: 113 NELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPS 172
Query: 272 GWKLEKTIDYFMDFTS 287
GW +T+ F F++
Sbjct: 173 GWLSTRTVYEFARFSA 188
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 334 DFIGINYYGQEVVSGPG--------LKLVETDEY-SESGRGVYPDGLFRVLHQFHERYKH 384
DFIG+NYY V +KL + E ++ G VYP G++ L + RY
Sbjct: 260 DFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKK-ASRYGR 318
Query: 385 LNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYG 444
P ITENG++ D R ++I+HL V+ A+ G+ V GY +W+ DN+EW +G+G
Sbjct: 319 ---PLYITENGIATLDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDNYEWKEGFG 375
Query: 445 PKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTREDRAR-AWSELQL 492
P+FGLV VD R PR S +++ ++ + ++ E R ELQL
Sbjct: 376 PRFGLVEVD-YQTFERRPRKSAYVYGEIARSKEIKDELLKRYGLPELQL 423
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L G + +R I+WSR+ P E N A +Y+ II+ + + G+ ++T
Sbjct: 55 DIQLMTSLGYNAYRFSIEWSRLFPEE------NKFNEDAFMKYREIIDLLLTRGITPLVT 108
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYF 282
L H + P W + GG+ E+ + ++
Sbjct: 109 LHHFTSPLWFMKKGGFLREENLKHW 133
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVV-SGPGLKL-------VETDEYSESGRGVYPDGLFRVLHQ 377
+D IS +DF+GINYY + VV PG L +E +E G +YP GL+ +L +
Sbjct: 288 MDIISRDIDFLGINYYSRMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVR 347
Query: 378 FHERYKHLNLPFIITENGVSDETDLI---------RRPYVIEHLLAVYAAMITGVPVIGY 428
++ Y + P ITENG + + L R Y+ +H Y A+ GVP+ GY
Sbjct: 348 VNKEYT--DKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGY 405
Query: 429 LFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKV 478
W++ DN+EWA GY +FGL+ VD N R + S + +V+ G+V
Sbjct: 406 YVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWYREVIEKGQV 455
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R W RI+P K VN L+ YK +++ + ++ M+T
Sbjct: 71 DIELMKEIGIRSYRFSTSWPRILPEG-----KGRVNQKGLDFYKRLVDNLLKANIRPMIT 125
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFT 286
L+H LP + GGW T YF ++
Sbjct: 126 LYHWDLPQALQDKGGWTNRDTAKYFAEYA 154
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 19/149 (12%)
Query: 334 DFIGINYYGQEVVSGP-----GLKLVETDE-YSESGRGVYPDGLFRVLHQFHERYKHLNL 387
DF+GINYY ++VV G + V D +E G +YP GL+ +L + H Y +++L
Sbjct: 289 DFLGINYYTRQVVKNNSEAFIGAESVAMDNPKTEMGWEIYPQGLYDLLTRIHRDYGNIDL 348
Query: 388 PFIITENGVSDETDLIRRP----------YVIEHLLAVYAAMITGVPVIGYLFWTISDNW 437
ITENG + D++ R Y+ H A +A+ GVP+ GY W+ DN+
Sbjct: 349 --YITENGAA-FNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDNF 405
Query: 438 EWADGYGPKFGLVAVDRANNLARIPRPSY 466
EWA+GY +FG+V V+ I + +Y
Sbjct: 406 EWAEGYEKRFGIVHVNYKTQERTIKKSAY 434
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K G+ +R I W RI P G E +N ++ Y+ +I+ + ++ +T
Sbjct: 64 DVQLLKSLGIKSYRFSIAWPRIFP----KGFGE-INQKGIQFYRDLIDELIKNDIEPAIT 118
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
++H LP + GGW + DY++D+ +
Sbjct: 119 IYHWDLPQKLQDIGGWANPQVADYYVDYAN 148
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVS-GPGLKLVETDE------YSESGRGVYPDGLFRVLHQF 378
+D I + +D IGINYY V P ++++E ++ G V GL+ VLH
Sbjct: 280 MDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYL 339
Query: 379 HERYKHLNLPFIITENG--VSDET------DLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
K+ N+ ITENG ++DE D R Y+ +HL+ V+ A+ G+ V GY+
Sbjct: 340 Q---KYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRAIHDGLHVKGYMA 396
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
W++ DN+EWA+GY +FG++ VD + R P+ SY+ + VV
Sbjct: 397 WSLLDNFEWAEGYNMRFGMIHVDFRTQV-RTPKQSYYWYRNVV 438
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R + W RI P NG E VN L+ Y +++ + G++ T
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFP----NGDGE-VNQEGLDYYHRVVDLLNDNGIEPFCT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRPYGL 308
L+H LP + GGW +TI F+ F T + G + H ++F P+ +
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCI 169
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 19/165 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVS-GPGLKLVETDE------YSESGRGVYPDGLFRVLHQF 378
+D I + +D IGINYY V P ++++E ++ G V GL+ VLH
Sbjct: 281 MDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYL 340
Query: 379 HERYKHLNLPFIITENG--VSDET------DLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
K+ N+ ITENG ++DE D R Y+ +HL+ V+ + G+ V GY+
Sbjct: 341 Q---KYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMA 397
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
W++ DN+EWA+GY +FG++ VD + R P+ SY+ + VV+
Sbjct: 398 WSLLDNFEWAEGYNMRFGMIHVDFRTQV-RTPKESYYWYRNVVSN 441
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R + W RI P NG E VN L+ Y +++ + G++ T
Sbjct: 64 DIRLMKELGIRTYRFSVSWPRIFP----NGDGE-VNQEGLDYYHRVVDLLNDNGIEPFCT 118
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRPYGL 308
L+H LP + GGW +TI F+ F T + G + H ++F P+ +
Sbjct: 119 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCI 170
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 19/165 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVS-GPGLKLVETDE------YSESGRGVYPDGLFRVLHQF 378
+D I + +D IGINYY V P ++++E ++ G V GL+ VLH
Sbjct: 280 MDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYL 339
Query: 379 HERYKHLNLPFIITENG--VSDET------DLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
K+ N+ ITENG ++DE D R Y+ +HL+ V+ + G+ V GY+
Sbjct: 340 Q---KYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMA 396
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
W++ DN+EWA+GY +FG++ VD + R P+ SY+ + VV+
Sbjct: 397 WSLLDNFEWAEGYNMRFGMIHVDFRTQV-RTPKQSYYWYRNVVSN 440
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R + W RI P NG E VN L+ Y +++ + G++ T
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFP----NGDGE-VNQKGLDYYHRVVDLLNDNGIEPFCT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRPYGL 308
L+H LP + GGW +TI F+ F T + G + H ++F P+ +
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCI 169
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 19/165 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVS-GPGLKLVETDE------YSESGRGVYPDGLFRVLHQF 378
+D I + +D IGINYY V P ++++E ++ G V GL+ VLH
Sbjct: 280 MDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYL 339
Query: 379 HERYKHLNLPFIITENG--VSDET------DLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
K+ N+ ITENG ++DE D R Y+ +HL+ V+ + G+ V GY+
Sbjct: 340 Q---KYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMA 396
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
W++ DN+EWA+GY +FG++ VD + R P+ SY+ + VV+
Sbjct: 397 WSLLDNFEWAEGYNMRFGMIHVDFRTQV-RTPKESYYWYRNVVSN 440
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R + W RI P NG E VN L+ Y +++ + G++ T
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFP----NGDGE-VNQEGLDYYHRVVDLLNDNGIEPFCT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRPYGL 308
L+H LP + GGW +TI F+ F T + G + H ++F P+ +
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCI 169
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 19/165 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVS-GPGLKLVETDE------YSESGRGVYPDGLFRVLHQF 378
+D I + +D IGINYY V P ++++E ++ G V GL+ VLH
Sbjct: 280 MDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYL 339
Query: 379 HERYKHLNLPFIITENG--VSDET------DLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
K+ N+ ITENG ++DE D R Y+ +HL+ V+ + G+ V GY+
Sbjct: 340 Q---KYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMA 396
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
W++ DN+EWA+GY +FG++ VD + R P+ SY+ + VV+
Sbjct: 397 WSLLDNFEWAEGYNMRFGMIHVDFRTQV-RTPKESYYWYRNVVSN 440
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R + W RI P NG E VN L+ Y +++ + G++ T
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIFP----NGDGE-VNQKGLDYYHRVVDLLNDNGIEPFCT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRPYGL 308
L+H LP + GGW +TI F+ F T + G + H ++F P+ +
Sbjct: 118 LYHWDLPQALQDAGGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCI 169
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 38/167 (22%)
Query: 334 DFIGINYYGQEVVSGPGLKLVETDEYS--------------------ESGRG---VYPDG 370
DF+G+NYY V+ ++ +S +SG +YP+G
Sbjct: 340 DFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEG 399
Query: 371 LFRVLHQFHERYKHLNLPFI-ITENGVSD-----------ETDLIRRPYVIEHLLAVYAA 418
+ ++L + Y N+P I +TENGV D D +R Y+ +H+ V A
Sbjct: 400 IRKILVYTKKTY---NVPLIYVTENGVDDVKNTNLTLSEARKDSMRLKYLQDHIFNVRQA 456
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
M GV V GY W++ DN+EW +GYG +FG++ +D +N AR P+ S
Sbjct: 457 MNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDS 503
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + K+ G+ +R I WSR++P ++G VN + Y +I+ + + G+K +T
Sbjct: 81 DVNILKNLGLDAYRFSISWSRVLPGGRLSG---GVNKEGINYYNNLIDGLLANGIKPFVT 137
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
LFH +P A EYGG+ + +D F ++
Sbjct: 138 LFHWDVPQALEDEYGGFLSPRIVDDFCEY 166
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 38/167 (22%)
Query: 334 DFIGINYYGQEVVSGPGLKLVETDEYS--------------------ESGRG---VYPDG 370
DF+G+NYY V+ ++ +S +SG +YP+G
Sbjct: 340 DFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEG 399
Query: 371 LFRVLHQFHERYKHLNLPFI-ITENGVSD-----------ETDLIRRPYVIEHLLAVYAA 418
+ ++L + Y N+P I +TENGV D D +R Y+ +H+ V A
Sbjct: 400 IRKILVYTKKTY---NVPLIYVTENGVDDVKNTNLTLSEARKDSMRLKYLQDHIFNVRQA 456
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
M GV V GY W++ DN+EW +GYG +FG++ +D +N AR P+ S
Sbjct: 457 MNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDS 503
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + K+ G+ +R I WSR++P ++G VN + Y +I+ + + G+K +T
Sbjct: 81 DVNILKNLGLDAYRFSISWSRVLPGGRLSG---GVNKEGINYYNNLIDGLLANGIKPFVT 137
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
LFH +P A EYGG+ + +D F ++
Sbjct: 138 LFHWDVPQALEDEYGGFLSPRIVDDFCEY 166
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 38/167 (22%)
Query: 334 DFIGINYYGQEVVSGPGLKLVETDEYS--------------------ESGRG---VYPDG 370
DF+G+NYY V+ ++ +S +SG +YP+G
Sbjct: 340 DFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEG 399
Query: 371 LFRVLHQFHERYKHLNLPFI-ITENGVSD-----------ETDLIRRPYVIEHLLAVYAA 418
+ ++L + Y N+P I +TENGV D D +R Y+ +H+ V A
Sbjct: 400 IRKILVYTKKTY---NVPLIYVTENGVDDVKNTNLTLSEARKDSMRLKYLQDHIFNVRQA 456
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
M GV V GY W++ DN+EW +GYG +FG++ +D +N AR P+ S
Sbjct: 457 MNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDS 503
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + K+ G+ +R I WSR++P ++G VN + Y +I+ + + G+K +T
Sbjct: 81 DVNILKNLGLDAYRFSISWSRVLPGGRLSG---GVNKEGINYYNNLIDGLLANGIKPFVT 137
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
LFH +P A EYGG+ + +D F ++
Sbjct: 138 LFHWDVPQALEDEYGGFLSPRIVDDFCEY 166
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 81/178 (45%), Gaps = 36/178 (20%)
Query: 332 RLDFIGINYYGQEVVSG--------------------PGLKLVE----TDEYSESGRGVY 367
+LDF+G+NYY +VS PG V E + G V
Sbjct: 300 KLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAMGWAVD 359
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVS---------DETDLIRRPYVIEHLLAVYAA 418
P GL+ +L + + LP +ITENG + + D R YV +HL AV+ A
Sbjct: 360 PSGLYELLRRLSSDFP--ALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRA 417
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTG 476
+ G V GY W++ DN+EWA GY +FG V VD RIP+ S + +V TG
Sbjct: 418 IKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTG-TRIPKASARWYAEVARTG 474
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L + G+ +R + W RI P L++ ++F Y+ + + + + G++ + T
Sbjct: 76 DVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDF-----YRRLADELLAKGIQPVAT 130
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYF 282
L+H LP GGW T + F
Sbjct: 131 LYHWDLPQELENAGGWPERATAERF 155
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 25/175 (14%)
Query: 324 PYVDS----ISDRLDFIGINYYGQEVVS---GPGLKLVETDEYS------ESGRGVYPDG 370
P VD I +DFIGINYY + G ++ ++ S + G +Y +G
Sbjct: 274 PIVDGDMELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEG 333
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSDETDLI---------RRPYVIEHLLAVYAAMIT 421
L+ +L ++Y N ITENG L R Y+ HL+ A+
Sbjct: 334 LYDLLRYTADKYG--NPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIED 391
Query: 422 GVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTG 476
G+ + GY+ W++ DN+EWA+GYG +FGLV VD + L R P+ S++ + V++ G
Sbjct: 392 GINLKGYMEWSLMDNFEWAEGYGMRFGLVHVDY-DTLVRTPKDSFYWYKGVISRG 445
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L KD GV V+R I W R++P G E VN A L+ Y +++ + + G++ T
Sbjct: 63 DVQLLKDLGVKVYRFSISWPRVLP----QGTGE-VNRAGLDYYHRLVDELLANGIEPFCT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRPYGL 308
L+H LP + GGW TID F ++ K G + ++F P+ +
Sbjct: 118 LYHWDLPQALQDQGGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCM 169
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 20/166 (12%)
Query: 326 VDSISDRLDFIGINYYGQEVVS----GPG-LKLVETD-EYSESGRGVYPDGLFRVLHQFH 379
+ I +++DF+G+NYY +V P + VE D + G + P+G++ +L +
Sbjct: 302 MSEIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVK 361
Query: 380 ERYKHLNLPFI-ITENG------VSDET---DLIRRPYVIEHLLAVYAAMITGVPVIGYL 429
E Y N P + ITENG VS++ D R Y+ H+ + A+ GVP+ GY
Sbjct: 362 EEY---NPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYF 418
Query: 430 FWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
W++ DN+EWA+GY +FG+V VD + RI + S + ++ VV
Sbjct: 419 VWSLLDNFEWAEGYSKRFGIVYVDYSTQ-KRIVKDSGYWYSNVVKN 463
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 176 VTAWHNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPV 225
++ WH H ++ D+ ++++ + GV +R I W RI+P
Sbjct: 54 MSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG-- 111
Query: 226 NGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDF 285
VN L+ Y II+ + G+ +T++H LP GGW + D+F ++
Sbjct: 112 ---TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLKGGWANREIADWFAEY 168
Query: 286 T 286
+
Sbjct: 169 S 169
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 16/142 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVSG----PGLKLVETDE-YSESGRGVYPDGLFRVLHQFHE 380
+ +IS +DF+G+NYY V PG+++V+ + + G + P+GL+ +L
Sbjct: 279 MQTISAPIDFLGVNYYNPMRVKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITR 338
Query: 381 RYKHLNLPFIITENGVS-----DETDLIRRP----YVIEHLLAVYAAMITGVPVIGYLFW 431
Y LP ITENG + D++ + P Y H+ A A+ GV + GY W
Sbjct: 339 TYG--KLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAW 396
Query: 432 TISDNWEWADGYGPKFGLVAVD 453
++ DN+EWA+GY +FG++ VD
Sbjct: 397 SLLDNFEWAEGYSKRFGIIYVD 418
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+L L + G+ +R I W+RI P +N L+ Y+ ++ + + M T
Sbjct: 63 DLDLMRQLGLKTYRFSIAWARIQPDS-----SRQINQRGLDFYRRLVEGLHKRDILPMAT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFT 286
L+H LP W + GGW ++ F ++T
Sbjct: 118 LYHWDLPQWVEDEGGWLSRESASRFAEYT 146
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 16/142 (11%)
Query: 326 VDSISDRLDFIGINYYGQEVVSG----PGLKLVETDE-YSESGRGVYPDGLFRVLHQFHE 380
+ +IS +DF+G+NYY V PG+++V+ + + G + P+GL+ +L
Sbjct: 300 MQTISAPIDFLGVNYYNPMRVKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITR 359
Query: 381 RYKHLNLPFIITENGVS-----DETDLIRRP----YVIEHLLAVYAAMITGVPVIGYLFW 431
Y LP ITENG + D++ + P Y H+ A A+ GV + GY W
Sbjct: 360 TYG--KLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAW 417
Query: 432 TISDNWEWADGYGPKFGLVAVD 453
++ DN+EWA+GY +FG++ VD
Sbjct: 418 SLLDNFEWAEGYSKRFGIIYVD 439
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+L L + G+ +R I W+RI P +N L+ Y+ ++ + + M T
Sbjct: 84 DLDLMRQLGLKTYRFSIAWARIQPDS-----SRQINQRGLDFYRRLVEGLHKRDILPMAT 138
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFT 286
L+H LP W + GGW ++ F ++T
Sbjct: 139 LYHWDLPQWVEDEGGWLSRESASRFAEYT 167
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 326 VDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESG----------------RGVYPD 369
V+ I DF+GIN+Y ++ G++ E Y +SG V P
Sbjct: 303 VEYIRGTHDFLGINFY-TALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPW 361
Query: 370 GLFRVLHQFHERYKHLNLPFIITENGVSDE---TDLIRRPYVIEHLLAVYAAMI-TGVPV 425
G + L+ Y N P ITENG SD D R Y EHL + A+ GV V
Sbjct: 362 GFRKELNWIKNEYN--NPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGVNV 419
Query: 426 IGYLFWTISDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKV 478
IGY W++ DN+EW GY KFG+ AVD + RIP+ S + +++ T K+
Sbjct: 420 IGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K+ K+ G V+R I W+R++P G VN ++ Y +IN + + G++ M+T
Sbjct: 71 DVKILKELGAQVYRFSISWARVLP----EGHDNIVNQDGIDYYNNLINELLANGIEPMVT 126
Query: 258 LFHHSLPAWAGEYGGW 273
++H LP + GGW
Sbjct: 127 MYHWDLPQALQDLGGW 142
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 326 VDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESG----------------RGVYPD 369
V+ I DF+GIN+Y ++ G++ E Y +SG V P
Sbjct: 303 VEYIRGTHDFLGINFY-TALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPW 361
Query: 370 GLFRVLHQFHERYKHLNLPFIITENGVSDE---TDLIRRPYVIEHLLAVYAAMI-TGVPV 425
G + L+ Y N P ITENG SD D R Y EHL + A+ GV V
Sbjct: 362 GFRKELNWIKNEYN--NPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGVNV 419
Query: 426 IGYLFWTISDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKV 478
IGY W++ DN+EW GY KFG+ AVD + RIP+ S + +++ T K+
Sbjct: 420 IGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K+ K+ G V+R I W+R++P G VN ++ Y +IN + + G++ M+T
Sbjct: 71 DVKILKELGAQVYRFSISWARVLP----EGHDNIVNQDGIDYYNNLINELLANGIEPMVT 126
Query: 258 LFHHSLPAWAGEYGGW 273
++H LP + GGW
Sbjct: 127 MYHWDLPQALQDLGGW 142
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 326 VDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESG----------------RGVYPD 369
V+ I DF+GIN+Y ++ G++ E Y +SG V P
Sbjct: 303 VEYIRGTHDFLGINFY-TALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPW 361
Query: 370 GLFRVLHQFHERYKHLNLPFIITENGVSDE---TDLIRRPYVIEHLLAVYAAMI-TGVPV 425
G + L+ Y N P ITENG SD D R Y EHL + A+ GV V
Sbjct: 362 GFRKELNWIKNEYN--NPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGVNV 419
Query: 426 IGYLFWTISDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKV 478
IGY W++ DN+EW GY KFG+ AVD + RIP+ S + +++ T K+
Sbjct: 420 IGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K+ K+ G V+R I W+R++P G VN ++ Y +IN + + G++ M+T
Sbjct: 71 DVKILKELGAQVYRFSISWARVLP----EGHDNIVNQDGIDYYNNLINELLANGIEPMVT 126
Query: 258 LFHHSLPAWAGEYGGW 273
++H LP + GGW
Sbjct: 127 MYHWDLPQALQDLGGW 142
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 326 VDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESG----------------RGVYPD 369
V+ I DF+GIN+Y ++ G++ E Y +SG V P
Sbjct: 303 VEYIRGTHDFLGINFY-TALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPW 361
Query: 370 GLFRVLHQFHERYKHLNLPFIITENGVSDE---TDLIRRPYVIEHLLAVYAAMI-TGVPV 425
G + L+ Y N P ITENG SD D R Y EHL + A+ GV V
Sbjct: 362 GFRKELNWIKNEYN--NPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGVNV 419
Query: 426 IGYLFWTISDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKV 478
IGY W++ DN+EW GY KFG+ AVD + RIP+ S + +++ T K+
Sbjct: 420 IGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKI 473
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K+ K+ G V+R I W+R++P G VN ++ Y +IN + + G++ M+T
Sbjct: 71 DVKILKELGAQVYRFSISWARVLP----EGHDNIVNQDGIDYYNNLINELLANGIEPMVT 126
Query: 258 LFHHSLPAWAGEYGGW 273
++H LP + GGW
Sbjct: 127 MYHWDLPQALQDLGGW 142
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
Query: 334 DFIGINYYGQEVV-SGPGLKLVETDEY------SESGRGVYPDGLFRVLHQFHERYKHLN 386
DF+GINYY + ++ S L++ ++ ++ G ++P+ +++L + + +
Sbjct: 297 DFLGINYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSK-G 355
Query: 387 LPFIITENGVSDETDLI--------RRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWE 438
LP +ITENG + +L+ R+ Y+ EHL A + + G + GY W+ DN+E
Sbjct: 356 LPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFE 415
Query: 439 WADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 474
WA GY +FG+V ++ R P+ S F +++
Sbjct: 416 WAWGYSKRFGIVHINYETQ-ERTPKQSALWFKQMMA 450
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K G +R + W RIMPA + +N L Y+ +++ + G+ MLT
Sbjct: 72 DVQLMKQLGFLHYRFSVAWPRIMPAAGI------INEEGLLFYEHLLDEIELAGLIPMLT 125
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
L+H LP W + GGW +TI +F + S
Sbjct: 126 LYHWDLPQWIEDEGGWTQRETIQHFKTYAS 155
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
Query: 334 DFIGINYYGQEVV-SGPGLKLVETDEY------SESGRGVYPDGLFRVLHQFHERYKHLN 386
DF+GINYY + ++ S L++ ++ ++ G ++P+ +++L + + +
Sbjct: 295 DFLGINYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSK-G 353
Query: 387 LPFIITENGVSDETDLI--------RRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWE 438
LP +ITENG + +L+ R+ Y+ EHL A + + G + GY W+ DN+E
Sbjct: 354 LPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFE 413
Query: 439 WADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 474
WA GY +FG+V ++ R P+ S F +++
Sbjct: 414 WAWGYSKRFGIVHINYETQ-ERTPKQSALWFKQMMA 448
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K G +R + W RIMPA + +N L Y+ +++ + G+ MLT
Sbjct: 70 DVQLMKQLGFLHYRFSVAWPRIMPAAGI------INEEGLLFYEHLLDEIELAGLIPMLT 123
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
L+H LP W + GGW +TI +F + S
Sbjct: 124 LYHWDLPQWIEDEGGWTQRETIQHFKTYAS 153
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 36/178 (20%)
Query: 329 ISDRLDFIGINYYGQEVVSG----PGLK-LVETDE-----YSESGR-----------GVY 367
++ DF+G+NYY + P + ++TD + +G+ +Y
Sbjct: 314 LTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCIY 373
Query: 368 PDGLFRVLHQFHERYKHLNLPFI-ITENGVSDETD--------LIRRP---YVIEHLLAV 415
P G+ ++L H N P I ITENG ++ D L+ P Y HL V
Sbjct: 374 PQGIRKLLLYVKN---HYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYV 430
Query: 416 YAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
A+ GV V GY W++ DN EW GY +FGLV VD NNL R P+ S H F +
Sbjct: 431 LTAIGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSFL 488
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + KD + +R I W R++P ++G VN + Y +IN V + GM+ +T
Sbjct: 78 DIGIMKDMNLDAYRFSISWPRVLPKGKLSG---GVNREGINYYNNLINEVLANGMQPYVT 134
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG--VAHHVSFMRPYGL 308
LFH +P A EY G+ +D F D+ K + G V H ++ P+G+
Sbjct: 135 LFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFK-EFGDRVKHWITLNEPWGV 187
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 334 DFIGINYYGQEVV-SGPGLKLVETDEY------SESGRGVYPDGLFRVLHQFHERYKHLN 386
DF+GINYY + ++ S L++ ++ ++ G ++P+ +++L + + +
Sbjct: 297 DFLGINYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSK-G 355
Query: 387 LPFIITENGVSDETDLI--------RRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWE 438
LP +ITENG + +L+ R Y+ EHL A + + G + GY W+ DN+E
Sbjct: 356 LPILITENGAAMRDELVNGQIEDTGRHGYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFE 415
Query: 439 WADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 474
WA GY +FG+V ++ R P+ S F +++
Sbjct: 416 WAWGYSKRFGIVHINYETQ-ERTPKQSALWFKQMMA 450
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K G +R + W RIMPA + +N L Y+ +++ + G+ MLT
Sbjct: 72 DVQLMKQLGFLHYRFSVAWPRIMPAAGI------INEEGLLFYEHLLDEIELAGLIPMLT 125
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
L+H LP W + GGW +TI +F + S
Sbjct: 126 LYHWDLPQWIEDEGGWTQRETIQHFKTYAS 155
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 32/177 (18%)
Query: 331 DRLDFIGINYYGQEVVSGPGLKLVETDEYS-----------------ESGRGVYPDGLFR 373
+R+D++G+N+Y + V P V + +S + G +YP+ ++
Sbjct: 288 NRVDYLGLNFYHPKRVKAPDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIYPEAVYD 347
Query: 374 VLHQFHERYKHLNLPFIITENGVS--------DETDLIRRPYVI----EHLLAVYAAMIT 421
+ + + Y N+P+ ++ENGV DET I+ Y I EHL ++ +
Sbjct: 348 IAIKMRDHYD--NIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGIEA 405
Query: 422 GVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKV 478
G GY WT D W W + Y ++GLV + + R P+ S + F KV T ++
Sbjct: 406 GSNCFGYHVWTPIDGWSWLNAYKNRYGLVE-NNIHTQVRRPKASAYWFKKVATHNRL 461
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+L L G + +R I W+R++ + + T+N L Y +I+ + G++ ++
Sbjct: 60 DLTLLASLGHNSYRTSIQWTRLID----DFEQATINPDGLAYYNRVIDACLANGIRPVIN 115
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTS 289
L H LP A YGGW+ + +D F+ F+
Sbjct: 116 LHHFDLPIALYQAYGGWESKHVVDLFVAFSKVC 148
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 37/182 (20%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVET---DEYSESGR--------------------G 365
+ LDF+GIN+Y ++ T + +++G
Sbjct: 309 VKGALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLY 368
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET-----------DLIRRPYVIEHLLA 414
+ P G+ +++ ERY + P ITENG+ D D R Y ++L
Sbjct: 369 IVPRGMRSLMNYVKERYN--SPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTN 426
Query: 415 VYAAMI-TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ A++ G V GY W++ DNWEWA GY +FGL VD +NL R P+ S F ++
Sbjct: 427 LAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALL 486
Query: 474 TT 475
T
Sbjct: 487 KT 488
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 177 TAWHNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPVN 226
T W H ++ +S+ D+ +++L D G+ +R I WSRI P N
Sbjct: 44 TIWDTFAHTFGKITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYP----N 99
Query: 227 GLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
G+ + VN A ++ Y +I+ + + G++ +TL+H LP A +Y GW + +D F +
Sbjct: 100 GVGQ-VNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAY 158
Query: 286 TSTSTKSKVG--VAHHVSFMRPY 306
T + + G V H ++ P+
Sbjct: 159 AETCFR-EFGDRVKHWITLNEPH 180
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 34/177 (19%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRG---------------------VY 367
+ DFIG+NYY + Y+ R VY
Sbjct: 329 VKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVY 388
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDET-----------DLIRRPYVIEHLLAVY 416
P G +L E Y N ITENGV + D R Y +HLL++
Sbjct: 389 PQGFRDLLLYVKENYG--NPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLL 446
Query: 417 AAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+A+ G V GY W++ DN+EW++GY +FG+ VD + R P+ S H F K +
Sbjct: 447 SAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 503
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNG-LKETVNFAALERYKWIINRVRSYGMKVML 256
+++L KD G+ +R I W+RI+P NG L+ VN ++ Y +IN + S G++ +
Sbjct: 93 DVRLMKDMGMDAYRFSISWTRILP----NGSLRGGVNKEGIKYYNNLINELLSKGVQPFI 148
Query: 257 TLFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTK 291
TLFH P A +Y G+ I+ F D+ K
Sbjct: 149 TLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFK 184
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 334 DFIGINYYGQEV-----VSGPGLKLVETDEY--SESGRG----------------VYPDG 370
D IGINYY +S ++ TD+ S+ +G +YP G
Sbjct: 375 DMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKG 434
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSD-----------ETDLIRRPYVIEHLLAVYAAM 419
L +L +Y N P ITENG+ D D R Y+ HL + ++
Sbjct: 435 LHDILMTMKNKYG--NPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI 492
Query: 420 ITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
G V GY W++ DN+EW+ GY +FG+V VDR N R + S
Sbjct: 493 DLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRS 538
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R I W RI+P + G +N +E Y +I+ + G++ +T
Sbjct: 135 DVRLLKEMGMDAYRFSISWPRILPKGTLAG---GINEKGVEYYNKLIDLLLENGIEPYIT 191
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFT 286
+FH P A YGG+ E+ I + DF
Sbjct: 192 IFHWDTPQALVEAYGGFLDERIIKDYTDFA 221
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 334 DFIGINYYGQEV-----VSGPGLKLVETDEY--SESGRG----------------VYPDG 370
D IGINYY +S ++ TD+ S+ +G +YP G
Sbjct: 375 DMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKG 434
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSD-----------ETDLIRRPYVIEHLLAVYAAM 419
L +L +Y N P ITENG+ D D R Y+ HL + ++
Sbjct: 435 LHDILMTMKNKYG--NPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI 492
Query: 420 ITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
G V GY W++ DN+EW+ GY +FG+V VDR N R + S
Sbjct: 493 DLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRS 538
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R I W RI+P + G +N +E Y +I+ + G++ +T
Sbjct: 135 DVRLLKEMGMDAYRFSISWPRILPKGTLAG---GINEKRVEYYNKLIDLLLENGIEPYIT 191
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFT 286
+FH P A YGG+ E+ I + DF
Sbjct: 192 IFHWDTPQALVDAYGGFLDERIIKDYTDFA 221
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 334 DFIGINYYGQEV-----VSGPGLKLVETDEY--SESGRG----------------VYPDG 370
D IGINYY +S ++ TD+ S+ +G +YP G
Sbjct: 375 DMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKG 434
Query: 371 LFRVLHQFHERYKHLNLPFIITENGVSD-----------ETDLIRRPYVIEHLLAVYAAM 419
L +L +Y N P ITENG+ D D R Y+ HL + ++
Sbjct: 435 LHDILMTMKNKYG--NPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI 492
Query: 420 ITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
G V GY W++ DN+EW+ GY +FG+V VDR N R + S
Sbjct: 493 DLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRS 538
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K+ G+ +R I W RI+P + G +N +E Y +I+ + G++ +T
Sbjct: 135 DVRLLKEMGMDAYRFSISWPRILPKGTLAG---GINEKRVEYYNKLIDLLLENGIEPYIT 191
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTS 289
+FH P A YGG+ E+ I + DF
Sbjct: 192 IFHWDTPQALVDAYGGFLDERIIKDYTDFAKVC 224
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 20/155 (12%)
Query: 326 VDSISDRLDFIGINYYGQEVVSGPGLK------LVETDEYSESGRGVYPDGLFRVLHQFH 379
+++I+ LDF+G+NYY V+ PG L + G VYP+GL+ +L +
Sbjct: 269 LEAIARPLDFLGVNYYAPVRVA-PGTGPLPVRYLPPEGPVTAMGWEVYPEGLYHLLKRLG 327
Query: 380 ERYKHLNLPFIITENGVSDE---------TDLIRRPYVIEHLLAVYAAMITGVPVIGYLF 430
+ + P ITENG + D R Y+ H+ A A GV + GY
Sbjct: 328 ---REVPWPLYITENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFV 384
Query: 431 WTISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
W++ DN+EWA GY +FGL VD + RIP+ S
Sbjct: 385 WSLMDNFEWAFGYTRRFGLYYVDFPSQ-RRIPKRS 418
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L + GV V+R + W RI+P + +N L Y +++R+ + G+ LT
Sbjct: 62 DIALMQSLGVGVYRFSVAWPRILPEG-----RGRINPKGLAFYDRLVDRLLAAGITPFLT 116
Query: 258 LFHHSLPAWAGEYGGWKLEKT 278
L+H LP + GGW+ +T
Sbjct: 117 LYHWDLPQALEDRGGWRSRET 137
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE----------TDLIRRPYVIEHLLAV 415
+YP GL +L E+Y N P ITENG++D D R Y+ H+ AV
Sbjct: 427 MYPKGLTDLLLIMKEKYG--NPPIFITENGIADVEGDPEMPDPLDDWKRLDYLQRHISAV 484
Query: 416 YAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
A+ G V G+ W + DN+EW GY +FGLV +D+ + R + S F K +
Sbjct: 485 KDAIDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKRKLKKSAKWFAKFNSV 544
Query: 476 GKV 478
K
Sbjct: 545 PKT 547
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K KD G+ V+R I WSRI+P NG + N ++ Y +IN + +G+ +T
Sbjct: 133 DVKALKDMGMKVYRFSISWSRILP----NGTGKP-NQKGIDYYNNLINSLIRHGIVPYVT 187
Query: 258 LFHHSLP-AWAGEYGGWKLEKTI 279
++H P A +YGG+ L+K I
Sbjct: 188 IWHWDTPQALEDKYGGF-LDKQI 209
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE----------TDLIRRPYVIEHLLAV 415
+YP GL +L E+Y N P ITENG++D D R Y+ H+ AV
Sbjct: 427 MYPKGLTDLLLIMKEKYG--NPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAV 484
Query: 416 YAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
A+ G V G+ W + DN+EW+ GY +FGLV +D+ + R + S F+K +
Sbjct: 485 KDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKFNSV 544
Query: 476 GK 477
K
Sbjct: 545 PK 546
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K KD G+ V+R I WSRI+P +G + VN A ++ Y +IN + + +T
Sbjct: 133 DVKALKDMGMKVYRFSISWSRILP----DGTGK-VNQAGIDYYNKLINSLIDNDIVPYVT 187
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKS 292
++H P A +YGG+ + +D + F K+
Sbjct: 188 IWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKN 223
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE----------TDLIRRPYVIEHLLAV 415
+YP GL +L E+Y N P ITENG++D D R Y+ H+ AV
Sbjct: 427 MYPKGLTDLLLIMKEKYG--NPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAV 484
Query: 416 YAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 475
A+ G V G+ W + DN+EW+ GY +FGLV +D+ + R + S F+K +
Sbjct: 485 KDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKFNSV 544
Query: 476 GK 477
K
Sbjct: 545 PK 546
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K KD G+ V+R I WSRI+P +G + VN A ++ Y +IN + + +T
Sbjct: 133 DVKALKDMGMKVYRFSISWSRILP----DGTGK-VNQAGIDYYNKLINSLIDNDIVPYVT 187
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKS 292
++H P A +YGG+ + +D + F K+
Sbjct: 188 IWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKN 223
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 326 VDSISDRLDFIGINYYGQ-EVVSGPGL----KLVETDEYSESGRGVYPDGLFRVLHQFHE 380
++ ++ LDF+G+NYY V G G L + G VYP+GL+ +L +
Sbjct: 269 LELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLKRLG- 327
Query: 381 RYKHLNLPFIITENGVSDE---------TDLIRRPYVIEHLLAVYAAMITGVPVIGYLFW 431
+ + P +TENG + D R Y+ H+ A A GV + GY W
Sbjct: 328 --REVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385
Query: 432 TISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
++ DN+EWA GY +FGL VD + RIP+ S
Sbjct: 386 SLMDNFEWAFGYTRRFGLYYVDFPSQ-RRIPKRS 418
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L + GV +R + W RI+P + +N L Y +++R+ + G+ LT
Sbjct: 62 DIALMQSLGVRAYRFSVAWPRILPEG-----RGRINPKGLAFYDRLVDRLLASGITPFLT 116
Query: 258 LFHHSLPAWAGEYGGWKLEKT 278
L+H LP E GGW+ +T
Sbjct: 117 LYHWDLPLALEERGGWRSRET 137
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ET---------DLIRRPYVIEHL 412
+YP+GL +L +Y N P ITENG+ D ET D R Y+ H+
Sbjct: 376 MYPEGLKDLLMIMKNKYG--NPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 433
Query: 413 LAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKV 472
+ ++ G V GY W++ DN+EW G+ ++G+V VDR NN R + S +
Sbjct: 434 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 493
Query: 473 VTTGKVTRE 481
T K +++
Sbjct: 494 NTAKKPSKK 502
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 20/111 (18%)
Query: 180 HNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLK 229
HN P ER+ S+ DI +++L K+ G+ +R I W RI+P G K
Sbjct: 53 HNHP---ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPK----GTK 105
Query: 230 ET-VNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKT 278
E +N ++ Y+ +IN + G++ +T+FH +P A +YGG+ L+K+
Sbjct: 106 EGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGF-LDKS 155
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ET---------DLIRRPYVIEHL 412
+YP+GL +L +Y N P ITENG+ D ET D R Y+ H+
Sbjct: 381 MYPEGLKDLLMIMKNKYG--NPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 438
Query: 413 LAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKV 472
+ ++ G V GY W++ DN+EW G+ ++G+V VDR NN R + S +
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 498
Query: 473 VTTGKVTRE 481
T K +++
Sbjct: 499 NTAKKPSKK 507
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 20/111 (18%)
Query: 180 HNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLK 229
HN P ER+ S+ DI +++L K+ G+ +R I W RI+P G K
Sbjct: 58 HNHP---ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPK----GTK 110
Query: 230 ET-VNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKT 278
E +N ++ Y+ +IN + G++ +T+FH +P A +YGG+ L+K+
Sbjct: 111 EGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGF-LDKS 160
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ET---------DLIRRPYVIEHL 412
+YP+GL +L +Y N P ITENG+ D ET D R Y+ H+
Sbjct: 381 MYPEGLKDLLMIMKNKYG--NPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 438
Query: 413 LAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKV 472
+ ++ G V GY W++ DN+EW G+ ++G+V VDR NN R + S +
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 498
Query: 473 VTTGKVTRE 481
T K +++
Sbjct: 499 NTAKKPSKK 507
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 20/111 (18%)
Query: 180 HNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLK 229
HN P ER+ S+ DI +++L K+ G+ +R I W RI+P G K
Sbjct: 58 HNHP---ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPK----GTK 110
Query: 230 ET-VNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKT 278
E +N ++ Y+ +IN + G++ +T+FH +P A +YGG+ L+K+
Sbjct: 111 EGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGF-LDKS 160
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ET---------DLIRRPYVIEHL 412
+YP+GL +L +Y N P ITENG+ D ET D R Y+ H+
Sbjct: 381 MYPEGLKDLLMIMKNKYG--NPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHI 438
Query: 413 LAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKV 472
+ ++ G V GY W++ DN+EW G+ ++G+V VDR NN R + S +
Sbjct: 439 ATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 498
Query: 473 VTTGKVTRE 481
T K +++
Sbjct: 499 NTAKKPSKK 507
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 20/111 (18%)
Query: 180 HNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLK 229
HN P ER+ S+ DI +++L K+ G+ +R I W RI+P G K
Sbjct: 58 HNHP---ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPK----GTK 110
Query: 230 ET-VNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKT 278
E +N ++ Y+ +IN + G++ +T+FH +P A +YGG+ L+K+
Sbjct: 111 EGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGF-LDKS 160
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 323 FPYVDSISDRLDFIGINYY---------GQEVVSGPGLKLVETDEYSESGRG-------- 365
F +D+ D DF+GINYY G+ + G + +Y G G
Sbjct: 281 FQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYV 340
Query: 366 --------VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLI--------RRPYVI 409
+YP+GL+ + + Y + +I TENG+ + + + R YV
Sbjct: 341 PRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYI-TENGLGYKDEFVDNTVYDDGRIDYVK 399
Query: 410 EHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLF 469
+HL + A+ G V GY W++ D + W++GY ++GL VD + R P+ S H +
Sbjct: 400 QHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVD-FDTQERYPKKSAHWY 458
Query: 470 TKVVTT 475
K+ T
Sbjct: 459 KKLAET 464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 191 FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSY 250
F+ ++L+LA++ GV+ R+ I WSRI P G E VN +E Y +
Sbjct: 52 FYHKYPVDLELAEEYGVNGIRISIAWSRIFPT----GYGE-VNEKGVEFYHKLFAECHKR 106
Query: 251 GMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
++ +TL H P G + + I++F+D+ +
Sbjct: 107 HVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDYAA 143
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 323 FPYVDSISDRLDFIGINYY---------GQEVVSGPGLKLVETDEYSESGRG-------- 365
F +D+ D DF+GINYY G+ + G + +Y G G
Sbjct: 281 FQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYV 340
Query: 366 --------VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLI--------RRPYVI 409
+YP+GL+ + + Y + +I TENG+ + + + R YV
Sbjct: 341 PRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYI-TENGLGYKDEFVDNTVYDDGRIDYVK 399
Query: 410 EHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLF 469
+HL + A+ G V GY W++ D + W++GY ++GL VD + R P+ S H +
Sbjct: 400 QHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVD-FDTQERYPKKSAHWY 458
Query: 470 TKVVTT 475
K+ T
Sbjct: 459 KKLAET 464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 191 FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSY 250
F+ ++L+LA++ GV+ R+ I WSRI P G E VN +E Y +
Sbjct: 52 FYHKYPVDLELAEEYGVNGIRISIAWSRIFPT----GYGE-VNEKGVEFYHKLFAECHKR 106
Query: 251 GMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
++ +TL H P G + + I++F+D+ +
Sbjct: 107 HVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDYAA 143
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDE---TDLIRRPYVIEHLLAVYAAMITG-V 423
P+GL ++L Y + L +ITENG D+ D + Y+ +L A AM
Sbjct: 351 PEGLRKLLIWLKNEYGNPQL--LITENGYGDDGQLDDFEKISYLKNYLNATLQAMYEDKC 408
Query: 424 PVIGYLFWTISDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGK 477
VIGY W++ DN+EW GY FGLV +D + R R SY F VV+TGK
Sbjct: 409 NVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNVVSTGK 463
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + KD + +R I W+RI P+ +N L+ + Y +IN + + ++T
Sbjct: 64 DVAIIKDLNLKFYRFSISWARIAPSGVMNSLEP----KGIAYYNNLINELIKNDIIPLVT 119
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDFT 286
++H LP + + GGW DYF ++
Sbjct: 120 MYHWDLPQYLQDLGGWVNPIMSDYFKEYA 148
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVY--------------------- 367
+ D+IGIN Y + G L YS + Y
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIV 367
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
P G++ ++ ++Y N +ITENG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F +P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQP 182
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVY--------------------- 367
+ D+IGIN Y + G L YS + Y
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIV 367
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
P G++ ++ ++Y N +ITENG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEP 182
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 323 FPYVDSISDRLDFIGINYY---------GQEVVSGPGLKLVETDEYSESGRG-------- 365
F +D+ D DF+GINYY G+ + G + +Y G G
Sbjct: 281 FQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYV 340
Query: 366 --------VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLI--------RRPYVI 409
+YP+GL+ + + Y + +I T NG+ + + + R YV
Sbjct: 341 PRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYI-TCNGLGYKDEFVDNTVYDDGRIDYVK 399
Query: 410 EHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLF 469
+HL + A+ G V GY W++ D + W++GY ++GL VD + R P+ S H +
Sbjct: 400 QHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVD-FDTQERYPKKSAHWY 458
Query: 470 TKVVTT 475
K+ T
Sbjct: 459 KKLAET 464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 191 FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSY 250
F+ ++L+LA++ GV+ R+ I WSRI P G E VN +E Y +
Sbjct: 52 FYHKYPVDLELAEEYGVNGIRISIAWSRIFPT----GYGE-VNEKGVEFYHKLFAECHKR 106
Query: 251 GMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTS 287
++ +TL H P G + + I++F+D+ +
Sbjct: 107 HVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDYAA 143
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVY--------------------- 367
+ D+IGIN Y + G L YS + Y
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIV 367
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
P G++ ++ ++Y N +IT NG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITSNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEP 182
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVY--------------------- 367
+ D+IGIN Y + G L YS + Y
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIV 367
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
P G++ ++ ++Y N +IT NG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITANGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEP 182
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 326 VDSISDRLDFIGINYYGQ-EVVSGPGL----KLVETDEYSESGRGVYPDGLFRVLHQFHE 380
++ ++ LDF+G+NYY V G G L + G VYP+GL +L +
Sbjct: 269 LELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLHHLLKRLG- 327
Query: 381 RYKHLNLPFIITENGVSDE---------TDLIRRPYVIEHLLAVYAAMITGVPVIGYLFW 431
+ + P +TENG + D R Y+ H+ A A GV + GY W
Sbjct: 328 --REVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385
Query: 432 TISDNWEWADGYGPKFGLVAVDRANNLARIPRPS 465
++ DN+EWA GY + GL VD + RIP+ S
Sbjct: 386 SLMDNFEWAFGYTRRSGLYYVDFPSQ-RRIPKRS 418
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L + GV +R + W RI+P + +N L Y +++R+ + G+ LT
Sbjct: 62 DIALMQSLGVRAYRFSVAWPRILPEG-----RGRINPKGLAFYDRLVDRLLASGITPFLT 116
Query: 258 LFHHSLPAWAGEYGGWKLEKT 278
L+H LP E GGW+ +T
Sbjct: 117 LYHWDLPLALEERGGWRSRET 137
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVY--------------------- 367
+ D+IGIN Y + G L YS + Y
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIV 367
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
P G++ ++ ++Y N +IT NG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEP 182
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYS----------ESGRGVYPD--------- 369
+ D+IGIN Y + G L YS ++G+ + P
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIV 367
Query: 370 --GLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
G++ ++ ++Y N +IT NG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEP 182
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 40/199 (20%)
Query: 334 DFIGINYYGQEVVSGP------GLKLVETDEYSES--------GRGVY-------PDGLF 372
DFIG+NYY V+ L D+ +++ G +Y P GL+
Sbjct: 338 DFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLY 397
Query: 373 RVLHQFHERYKHLNLPFI-ITENGVSDET-----------DLIRRPYVIEHLLAVYAAMI 420
++L E Y ++P + +TE+G+ +E D R Y +HL +V A+
Sbjct: 398 KLLVYTKETY---HVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAID 454
Query: 421 TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTR 480
GV V GY W+ DN+EW GY ++G++ VD + R P+ S ++ K GK T
Sbjct: 455 DGVNVKGYFVWSFFDNFEWNLGYICRYGIIHVDY-KSFERYPKES-AIWYKNFIAGKSTT 512
Query: 481 E--DRARAWSELQLAAKQK 497
R R ++++L +QK
Sbjct: 513 SPAKRRREEAQVELVKRQK 531
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++K+ K TG+ +R I WSR++P L VN ++ Y I+ + + G+K +T
Sbjct: 102 DIKIMKQTGLESYRFSISWSRVLPG---GRLAAGVNKDGVKFYHDFIDELLANGIKPSVT 158
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFT 286
LFH LP A EYGG+ + +D F ++
Sbjct: 159 LFHWDLPQALEDEYGGFLSHRIVDDFCEYA 188
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 388 PFIITENGVS--DETDL---------IRRPYVIEHLLAVYAAM-ITGVPVIGYLFWTISD 435
P +TENG S E+DL R Y E++ A+ A+ + GV V GY W++ D
Sbjct: 369 PIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGVNVKGYFAWSLMD 428
Query: 436 NWEWADGYGPKFGLVAVDRANNLARIPRPS 465
N+EWADGY +FG+ VD N R P+ S
Sbjct: 429 NFEWADGYVTRFGVTYVDYENGQKRFPKKS 458
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K G +R I WSRI+P G + VN A ++ Y ++ + G+ +T
Sbjct: 67 DIALLKSLGAKSYRFSISWSRIIPE---GGRGDAVNQAGIDHYVKFVDDLLDAGITPFIT 123
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYFMDF 285
LFH LP + G L +T ++ +DF
Sbjct: 124 LFHWDLPEGLHQRYGGLLNRT-EFPLDF 150
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 329 ISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVY--------------------- 367
+ D+IGIN Y + G L Y+ + Y
Sbjct: 308 VKGSADYIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIV 367
Query: 368 PDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIE---------HLLAVYAA 418
P G++ ++ ++Y N +IT NG+ +L R Y+ + +L + A
Sbjct: 368 PWGMYGCVNYIKQKYG--NPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKA 425
Query: 419 MITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
+ G V GY W++ DN+EW GY KFG+V VD N L R P+ S + F ++
Sbjct: 426 IDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVD-FNTLERHPKASAYWFRDML 479
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ L K +R I WSRI P + VN + Y +IN + G+ +
Sbjct: 78 DVNLMKSLNFDAYRFSISWSRIFPDG-----EGRVNQEGVAYYNNLINYLLQKGITPYVN 132
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTKSKVG-VAHHVSFMRP 305
L+H+ LP A +YGGW K D F ++ K+ V H +F P
Sbjct: 133 LYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEP 182
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 388 PFIITENG-----VSDETDLIRRPYVIEHLLAVYAAMIT-----GVPVIGYLFWTISDNW 437
P +TENG V E + I++L A AM+T GV V GY W++ DN+
Sbjct: 366 PIYVTENGAAFDDVVSEDGRVHDQNRIDYLKAYIGAMVTAVELDGVNVKGYFVWSLLDNF 425
Query: 438 EWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVV 473
EWA+GY +FG+V VD + RI + S + ++ VV
Sbjct: 426 EWAEGYSKRFGIVYVDYSTQ-KRIVKDSGYWYSNVV 460
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 176 VTAWHNVPHPEERLRFWSDPDI----------ELKLAKDTGVSVFRLGIDWSRIMPAEPV 225
++ WH H ++ D+ ++++ + GV +R I W RI+P
Sbjct: 39 MSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG-- 96
Query: 226 NGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDF 285
VN L+ Y II+ + G+ +T+FH LP GG + D+F ++
Sbjct: 97 ---TGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLPFALQLKGGLLNREIADWFAEY 153
Query: 286 T 286
+
Sbjct: 154 S 154
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 187 ERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINR 246
E + F+ ++KL + G FR I W+RI P G + N A L+ Y + +
Sbjct: 64 EAIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFP----KGDEAEPNEAGLQFYDDLFDE 119
Query: 247 VRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTK 291
YG++ ++TL H LP EYGG+ K ID+F+ F +
Sbjct: 120 CLKYGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFR 165
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 187 ERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINR 246
E + F+ ++KL + G FR I W+RI P G + N A L+ Y + +
Sbjct: 64 EAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFP----KGDEAEPNEAGLQFYDDLFDE 119
Query: 247 VRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTK 291
YG++ ++TL H LP EYGG+ K ID+F+ F +
Sbjct: 120 CLKYGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFR 165
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 187 ERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINR 246
E + F+ ++KL + G FR I W+RI P G + N A L+ Y + +
Sbjct: 64 EAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFP----KGDEAEPNEAGLQFYDDLFDE 119
Query: 247 VRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKTIDYFMDFTSTSTK 291
YG++ ++TL H LP EYGG+ K ID+F+ F +
Sbjct: 120 CLKYGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFR 165
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+++L K GV +R + WSRI+P G + VN A ++ Y+ +I + G+ +T
Sbjct: 67 DVQLLKSYGVKAYRFSLSWSRIIPK---GGRSDPVNGAGIKHYRTLIEELVKEGITPFVT 123
Query: 258 LFHHSLP-AWAGEYGGW-KLEKTIDYFMDFTSTSTKSKVGVAHH-VSFMRPY 306
L+H LP A YGGW E+ I F ++ +S + + ++F P+
Sbjct: 124 LYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPW 175
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 31/173 (17%)
Query: 326 VDSISDRLDFIGINYYGQEVVSGPG----LKLVETDEYSESGRGV-----------YPDG 370
++ + DF G+N Y +V G V+T G + Y G
Sbjct: 289 IELVKGSSDFFGLNTYTTHLVQDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPG 348
Query: 371 LFRVLHQFHERYKHLNLPFIITENG--VSDETDL---------IRRPYVIEHLLAVYAAM 419
FR L + +K + P +TENG V E DL R+ Y ++ A+ A+
Sbjct: 349 -FRWLLNY--LWKAYDKPVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAV 405
Query: 420 I-TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTK 471
G V GY W++ DN+EWA+GY +FG+ VD R P+ S ++
Sbjct: 406 TEDGADVRGYFGWSLLDNFEWAEGYKVRFGVTHVDYETQ-KRTPKKSAEFLSR 457
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 161 GENEVPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIM 220
G NE P E+ V A P+ + + F+ +++L + G FR I W+RI
Sbjct: 46 GTNERP---REITDGVVAGKYYPN-HQAIDFYHRYPEDIELFAEXGFKCFRTSIAWTRIF 101
Query: 221 PAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-AWAGEYGGWKLEKTI 279
P NG + N A L+ Y + + G++ ++TL H P +YGGW+ K I
Sbjct: 102 P----NGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPYHLVKQYGGWRNRKLI 157
Query: 280 DYFMDFTSTS 289
++++F
Sbjct: 158 QFYLNFAKVC 167
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 367 YPDGLFRVLHQFHERYKHLNLPFI-ITENGVS---DET------DLIRRPYVIEHLLAVY 416
YP G++ V+ F +Y + P I +TENG+S DE D R Y+ HL +
Sbjct: 385 YPKGIYSVMDYFKNKYYN---PLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLN 441
Query: 417 AAMI-TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 474
+ V V GYL W + DN+E+ G+ +FGL +D N R + S + ++
Sbjct: 442 KVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSFIS 500
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + + + +R I WSRI+P VN ++ Y +I+ + G+ +T
Sbjct: 82 DIDVLDELNATGYRFSIAWSRIIPR---GKRSRGVNEKGIDYYHGLISGLIKKGITPFVT 138
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
LFH LP EY G+ + ID F D+
Sbjct: 139 LFHWDLPQTLQDEYEGFLDPQIIDDFKDY 167
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 367 YPDGLFRVLHQFHERYKHLNLPFI-ITENGVS---DET------DLIRRPYVIEHLLAVY 416
YP G++ V+ F +Y + P I +TENG+S DE D R Y+ HL +
Sbjct: 383 YPKGIYSVMDYFKNKYYN---PLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLN 439
Query: 417 AAMI-TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRAN 456
+ V V GYL W + DN+E+ G+ +FGL +D N
Sbjct: 440 KVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNN 480
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + + + +R I WSRI+P VN ++ Y +I+ + G+ +T
Sbjct: 80 DIDVLDELNATGYRFSIAWSRIIPR---GKRSRGVNEKGIDYYHGLISGLIKKGITPFVT 136
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
LFH LP EY G+ + ID F D+
Sbjct: 137 LFHWDLPQTLQDEYEGFLDPQIIDDFKDY 165
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 367 YPDGLFRVLHQFHERYKHLNLPFI-ITENGVS---------DETDLIRRPYVIEHLLAVY 416
YP G++ V+ F +Y + P I +TENG+S D R Y+ HL +
Sbjct: 385 YPKGIYSVMDYFKNKYYN---PLIYVTENGISTPGSENRKESMLDYTRIDYLCSHLCFLN 441
Query: 417 AAMI-TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 474
+ V V GYL W + DN+E+ +G+ +FGL ++ N R + S + K ++
Sbjct: 442 KVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDRDLKKSGQWYQKFIS 500
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
++ + + + +R I WSRI+P VN ++ Y +I+ + G+ +T
Sbjct: 82 DIDVLDELNATGYRFSIAWSRIIPR---GKRSRGVNQKGIDYYHGLIDGLIKKGITPFVT 138
Query: 258 LFHHSLP-AWAGEYGGWKLEKTIDYFMDF 285
LFH LP EY G+ + ID F D+
Sbjct: 139 LFHWDLPQTLQDEYEGFLDPQIIDDFKDY 167
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+LK K G++ +R + WSR++P +G +N ++ Y II+ + G+ ++T
Sbjct: 62 DLKCIKQLGLTHYRFSLSWSRLLP----DGTTGFINQKGIDYYNKIIDDLLKNGVTPIVT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYF 282
L+H LP + GGW E I+ F
Sbjct: 118 LYHFDLPQTLEDQGGWLSEAIIESF 142
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFI-ITENGV--SDET---DLIRRPYVIEHLLAVYAAM 419
V P G+ ++L + Y N P I ITENG SD D R Y + ++ A+
Sbjct: 348 VVPWGVCKLLKYIKDTY---NNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAI 404
Query: 420 -ITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNL-ARIPRPSYHLFTKVV 473
+ V + Y W++ DN+EW GY +FGL VD + R+P S + K++
Sbjct: 405 QLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKII 460
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+LK K G++ +R + WSR++P +G +N ++ Y II+ + G+ ++T
Sbjct: 62 DLKCIKQLGLTHYRFSLSWSRLLP----DGTTGFINQKGIDYYNKIIDDLLKNGVTPIVT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYF 282
L+H LP + GGW E I+ F
Sbjct: 118 LYHFDLPQTLEDQGGWLSEAIIESF 142
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFI-ITENGV--SDET---DLIRRPYVIEHLLAVYAAM 419
V P G+ ++L + Y N P I ITENG SD D R Y + ++ A+
Sbjct: 348 VVPWGVCKLLKYIKDTY---NNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAI 404
Query: 420 -ITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNL-ARIPRPSYHLFTKVV 473
+ V + Y W++ DN+EW GY +FGL VD + R+P S + K++
Sbjct: 405 QLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKII 460
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257
+LK K G++ +R + WSR++P +G +N ++ Y II+ + G+ ++T
Sbjct: 62 DLKCIKQLGLTHYRFSLSWSRLLP----DGTTGFINQKGIDYYNKIIDDLLKNGVTPIVT 117
Query: 258 LFHHSLPAWAGEYGGWKLEKTIDYF 282
L+H LP + GGW E I+ F
Sbjct: 118 LYHFDLPQTLEDQGGWLSEAIIESF 142
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 366 VYPDGLFRVLHQFHERYKHLNLPFI-ITENGV--SDET---DLIRRPYVIEHLLAVYAAM 419
V P G+ ++L + Y N P I ITENG SD D R Y + ++ A+
Sbjct: 348 VVPWGVCKLLKYIKDTY---NNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAI 404
Query: 420 -ITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNL-ARIPRPSYHLFTKVV 473
+ V + Y W++ DN+EW GY +FGL VD + R+P S + K++
Sbjct: 405 QLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKII 460
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 187 ERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINR 246
E + F+ ++KL + G FR I W+RI P G + N L+ Y + +
Sbjct: 65 EAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFP----KGDEAQPNEEGLKFYDDMFDE 120
Query: 247 VRSYGMKVMLTLFHHSLPA-WAGEYGGWKLEKTIDYFMDFT 286
+ Y ++ ++TL H +P +YG W K +D+F+ F
Sbjct: 121 LLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFA 161
>pdb|1W91|A Chain A, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|B Chain B, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|C Chain C, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|D Chain D, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|E Chain E, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|F Chain F, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|G Chain G, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
pdb|1W91|H Chain H, Crystal Structure Of 1,4-Beta-D-Xylan Xylohydrolase Solve
Using Anomalous Signal From Seleniomethionine
Length = 503
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 22/95 (23%)
Query: 386 NLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMIT------GVPVIGYLFWTISDNWEW 439
+LP ITE S P H A+ AA I G V + +WT SD +E
Sbjct: 271 HLPLHITEYNTS------YSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSDVFEE 324
Query: 440 ADG----YGPKFGLVAVDRANNLARIPRPSYHLFT 470
D + FGLVA L IP+P++H FT
Sbjct: 325 MDVPKALFHGGFGLVA------LHSIPKPTFHAFT 353
>pdb|2BS9|A Chain A, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|B Chain B, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|C Chain C, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|D Chain D, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|E Chain E, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|F Chain F, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|G Chain G, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
pdb|2BS9|H Chain H, Native Crystal Structure Of A Gh39 Beta-Xylosidase Xynb1
From Geobacillus Stearothermophilus
Length = 503
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 22/95 (23%)
Query: 386 NLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMIT------GVPVIGYLFWTISDNWEW 439
+LP ITE S P H A+ AA I G V + +WT SD +E
Sbjct: 271 HLPLHITEYNTS------YSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSDVFEE 324
Query: 440 ADG----YGPKFGLVAVDRANNLARIPRPSYHLFT 470
D + FGLVA L IP+P++H FT
Sbjct: 325 MDVPKALFHGGFGLVA------LHSIPKPTFHAFT 353
>pdb|2BFG|A Chain A, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|B Chain B, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|C Chain C, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|D Chain D, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|E Chain E, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|F Chain F, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|G Chain G, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
pdb|2BFG|H Chain H, Crystal Structure Of Beta-Xylosidase (Fam Gh39) In Complex
With Dinitrophenyl-Beta-Xyloside And Covalently Bound
Xyloside
Length = 503
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 22/95 (23%)
Query: 386 NLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMIT------GVPVIGYLFWTISDNWEW 439
+LP ITE S P H A+ AA I G V + +WT SD +E
Sbjct: 271 HLPLHITEYNTS------YSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSDVFEE 324
Query: 440 ADG----YGPKFGLVAVDRANNLARIPRPSYHLFT 470
D + FGLVA L IP+P++H FT
Sbjct: 325 MDVPKALFHGGFGLVA------LHSIPKPTFHAFT 353
>pdb|3NUZ|A Chain A, Crystal Structure Of A Putative Acetyl Xylan Esterase
(Bf1801) From Bacteroides Fragilis Nctc 9343 At 2.30 A
Resolution
pdb|3NUZ|B Chain B, Crystal Structure Of A Putative Acetyl Xylan Esterase
(Bf1801) From Bacteroides Fragilis Nctc 9343 At 2.30 A
Resolution
pdb|3NUZ|C Chain C, Crystal Structure Of A Putative Acetyl Xylan Esterase
(Bf1801) From Bacteroides Fragilis Nctc 9343 At 2.30 A
Resolution
pdb|3NUZ|D Chain D, Crystal Structure Of A Putative Acetyl Xylan Esterase
(Bf1801) From Bacteroides Fragilis Nctc 9343 At 2.30 A
Resolution
pdb|3NUZ|E Chain E, Crystal Structure Of A Putative Acetyl Xylan Esterase
(Bf1801) From Bacteroides Fragilis Nctc 9343 At 2.30 A
Resolution
pdb|3NUZ|F Chain F, Crystal Structure Of A Putative Acetyl Xylan Esterase
(Bf1801) From Bacteroides Fragilis Nctc 9343 At 2.30 A
Resolution
Length = 398
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 14/71 (19%)
Query: 353 LVETDEYSE-------SGRGVYPDGLFRVLHQFHERYKHLNL-------PFIITENGVSD 398
L +T E +E +GR +P+ + ++ F + + ++ P I+TE G+
Sbjct: 263 LCQTQERAEVXTXPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDR 322
Query: 399 ETDLIRRPYVI 409
+ DL+R+ Y I
Sbjct: 323 DLDLVRKAYAI 333
>pdb|3K7M|X Chain X, Crystal Structure Of 6-Hydroxy-L-Nicotine Oxidase From
Arthrobacter Nicotinovorans
pdb|3K7Q|X Chain X, Crystal Structure Of Substrate-Bound 6-Hydroxy-L-Nicotine
Oxidase From Arthrobacter Nicotinovorans
pdb|3NG7|X Chain X, Complex Of Dithionite-Reduced 6-Hydroxy-L-Nicotine Oxidase
With Substrate Bound At Active Site And Inhibitor At
Exit Cavity
pdb|3NGC|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Intermediate
Methylmyosmine Product Formed During Catalytic Turnover
pdb|3NH3|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Final Ketone
Product Formed During Catalytic Turnover
pdb|3NHO|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Product Bound
At Active Site
pdb|3NK0|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Inhibitor
Bound At Active Site And Turnover Product At Exit Cavity
pdb|3NK1|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Serotonin
pdb|3NK2|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Dopamine
pdb|3NN6|X Chain X, Crystal Structure Of Inhibitor-Bound In Active Centre
6-Hydroxy-L- Nicotine Oxidase From Arthrobacter
Nicotinovorans
pdb|3NN0|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Nicotinamide
Length = 431
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 343 QEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDL 402
+E G GLK++ +E+G DG+F L+ + E + L T++G D TD+
Sbjct: 278 EEGHGGQGLKILIHVRGAEAGIECVGDGIFPTLYDYCEVSESERLLVAFTDSGSFDPTDI 337
>pdb|3K7T|A Chain A, Crystal Structure Of Apo-Form 6-Hydroxy-L-Nicotine
Oxidase, Crystal Form P3121
pdb|3K7T|B Chain B, Crystal Structure Of Apo-Form 6-Hydroxy-L-Nicotine
Oxidase, Crystal Form P3121
Length = 425
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 343 QEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDL 402
+E G GLK++ +E+G DG+F L+ + E + L T++G D TD+
Sbjct: 278 EEGHGGQGLKILIHVRGAEAGIECVGDGIFPTLYDYCEVSESERLLVAFTDSGSFDPTDI 337
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,400,192
Number of Sequences: 62578
Number of extensions: 741851
Number of successful extensions: 1945
Number of sequences better than 100.0: 84
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1638
Number of HSP's gapped (non-prelim): 166
length of query: 579
length of database: 14,973,337
effective HSP length: 104
effective length of query: 475
effective length of database: 8,465,225
effective search space: 4020981875
effective search space used: 4020981875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)