Citrus Sinensis ID: 008046

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
Protein Sequence
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Secondary Structure (PSIPRED)
cEEEEHHHHHHHHccccccccccccccccccEEEccccEEEEEEcccccccccEEEEEEcccccccEEEEccccccccccccEEEEEcccEEEEcccccEEEEEcccccccccEEEEEEcccEEEEccccccEEEEccccccccccccccccccccccccEEEEEccccccccccEEEEEEEcccccEEEEEEccEEEEEEccccccEEEcccccccccccEEEEEEEcccEEEEEEEEccccEEEEEEcccccEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccEEEEccccHHHHHHHHHcccccccccccccccccccEEEEccccccEEEcccccEEEEEEEEccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHccccccEEEEEEEccccEEEEEEEEcccccccEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEHHHHHHHcccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEcccccEEEEEEccccccccccEEEEEEcccEEEEEccccEEEEccccccccccEEEEEccccEEEEEcccccEEEEEcccccccccccccccccccccccEEEEEcccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEcccccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEccccEEEEEEEEcccccEEEEEEccccccccHcHcccccEEccccccccccccccccccHHHcccccEEcccccccccccEEEEcccccccccccEEcccccHHHHHHHHHHcccEEEEEEccccccccEEEEEccccHHHHHcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEcHHHHHHHHcccccccccccccccccEccEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccEEEEcccccccccccccHEccc
Coil and Loop (DISEMBL)
MLGAYSCLLFILGasaandnitpsqsirdgetlvsvngtfelgffspgtsakrYLGIwykrvsprTVAWVanretpltdqsgllnvtskgivlldgrdrifwssntsitmknpvvqlmdsgnlvltdgnynsllwqsfdhpcdtllpgmklgrnfktgmdrhlsswksindpapgefslwidthgfpqlvlRKGSVLQYragswnglgftgtpplkenvplcdykfvinenevyyecdakgpavsrlWVNQSGLVLRSIWSSQQDVWFLAyyapldrcdlysvcganarcttnssrrcdclegfvpkspnnwsegcvrerelkcrngdefpkyvklklpdtssswfnASMNLKECSelcskncsctayansdverggsgcllwfgdlmdmkeyndggqDLYIRIASergrsvtkKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDnfasynklgeggfgpvykgtlveGQEIAVKRLskgsgqgmeEFKNEVTLIARLQHRNLVKLLGCCiqadesmliyeympnksldffifdidwnglmltrsskshis
Flexible Loop (DISEMBL)
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFelgffspgtsaKRYLGIWYKRVSPRTVAWVANRetpltdqsgllnvtSKGIVLLDGRDRIFWSsntsitmknpvVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWnglgftgtpplkenvPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLegfvpkspnnwsegcVRERElkcrngdefpkyVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYansdverggSGCLLWFGDLMDMKEYNDGGQDLYIRIAsergrsvtkKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRlskgsgqgmeEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Low Complexity Region (SEG)
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Disordered region (IsUnstruct)
***AYSCLLFILGASAANDNIT***SIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRL*********EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLML*********
Disordered Region (DISOPRED)
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITM**PVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASE**********GIIIASVLLMAMFIVASLFCIWRKKLKK************MELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Disordered Region (DISEMBL)
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Disordered Region (DISPRO)
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGL*******EDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	579	2.2.26 [Sep-21-2011]
O81832	783	G-type lectin S-receptor-	yes	no	0.899	0.665	0.471	1e-149
O81833	815	G-type lectin S-receptor-	no	no	0.941	0.668	0.507	1e-145
O81905	850	Receptor-like serine/thre	no	no	0.939	0.64	0.437	1e-134
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.949	0.660	0.420	1e-129
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.948	0.649	0.406	1e-125
Q39086	843	Receptor-like serine/thre	no	no	0.925	0.635	0.426	1e-124
Q09092	857	Putative serine/threonine	N/A	no	0.929	0.627	0.405	1e-123
Q9S972	847	Receptor-like serine/thre	no	no	0.937	0.641	0.418	1e-122
P0DH86	853	G-type lectin S-receptor-	no	no	0.941	0.638	0.413	1e-121
O81906	849	G-type lectin S-receptor-	no	no	0.949	0.647	0.404	1e-115

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  530 bits (1365), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/571 (47%), Positives = 376/571 (65%), Gaps = 50/571 (8%)

Query: 15  SAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRE 74
           + A D +  +Q+++DG+T+VS  G+FE+GFFSPG S  RYLGIWYK++S +TV WVANR+
Sbjct: 21  AQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYKKISLQTVVWVANRD 80

Query: 75  TPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNT-----SITMKNPVVQLMDSGNLVLTD- 127
           +PL D SG L V+  G + L + R+ I WSS++       +++NP+VQ++D+GNLV+ + 
Sbjct: 81  SPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPIVQILDTGNLVVRNS 140

Query: 128 GNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFP 187
           G+    +WQS D+P D  LPGMK G NF TG++R L+SW++I+DP+ G ++  +D +G P
Sbjct: 141 GDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDDPSTGNYTNKMDPNGVP 200

Query: 188 QLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAV-SR 246
           Q  L+K SV+ +R G WNGL FTG P LK N P+  Y++V  E EVYY    + P+V +R
Sbjct: 201 QFFLKKNSVVVFRTGPWNGLRFTGMPNLKPN-PIYRYEYVFTEEEVYYTYKLENPSVLTR 259

Query: 247 LWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVP 306
           + +N +G + R  W      W     A +D CD Y++CG+   C  N S  C CL+GFV 
Sbjct: 260 MQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSCNINESPACRCLKGFVA 319

Query: 307 KSPN-----NWSEGCVRERELKCRNG-DEFPKYVKLKLPDTSSSWFNASMNLKECSELCS 360
           K+P      +WSEGCVR  +L C  G D F K  KLKLPDT +SW++ +M+L EC ++C 
Sbjct: 320 KTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTSWYDKNMDLNECKKVCL 379

Query: 361 KNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGII 420
           +NC+C+AY+  D+  GG GC+LWFGDL+D++EYN+ GQDLY+R+AS    ++ ++     
Sbjct: 380 RNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNENGQDLYVRLASSEIETLQRESS--- 436

Query: 421 IASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNK 480
                              R   +KQ        +ED+EL   D  ++++AT  F++ NK
Sbjct: 437 -------------------RVSSRKQ-------EEEDLELPFLDLDTVSEATSGFSAGNK 470

Query: 481 LGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ 540
           LG+GGFGPVYKGTL  GQE+AVKRLS+ S QG+EEFKNE+ LIA+LQHRNLVK+LG C+ 
Sbjct: 471 LGQGGFGPVYKGTLACGQEVAVKRLSRTSRQGVEEFKNEIKLIAKLQHRNLVKILGYCVD 530

Query: 541 ADESMLIYEYMPNKSLDFFIFD------IDW 565
            +E MLIYEY PNKSLD FIFD      +DW
Sbjct: 531 EEERMLIYEYQPNKSLDSFIFDKERRRELDW 561

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  515 bits (1327), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 293/577 (50%), Positives = 381/577 (66%), Gaps = 32/577 (5%)

Query: 21  ITPSQSIRDGETLVSVNGTFELGFFSPGTSAK---RYLGIWYKRVSPRTVAWVANRETPL 77
           ITP + ++DG+TL S +  F+LGFFS     +   R+LG+WY  + P  V WVANR  PL
Sbjct: 28  ITPKEFLKDGDTLSSPDQVFQLGFFSLDQEEQPQHRFLGLWY--MEPFAVVWVANRNNPL 85

Query: 78  TDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITM-----KNPVVQLMDSGNLVLTDGNYN 131
              SG LN++S G + L DG  +  WSS++S T       NP++++  SGNL+ +DG   
Sbjct: 86  YGTSGFLNLSSLGDLQLFDGEHKALWSSSSSSTKASKTANNPLLKISCSGNLISSDGE-E 144

Query: 132 SLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVL 191
           ++LWQSFD+P +T+L GMKLG+NFKT M+  LSSWK++ DP+PG+F+L +DT G PQL+L
Sbjct: 145 AVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLKDPSPGDFTLSLDTRGLPQLIL 204

Query: 192 RKG--SVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAVSRLWV 249
           RK   S   YR GSWNGL FTG P +     L DYKF  +  EV Y    +   VSRL +
Sbjct: 205 RKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYKFTSSAQEVNYSWTPRHRIVSRLVL 264

Query: 250 NQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNS--SRRCDCLEGFVPK 307
           N +G + R I  S+Q+ W LA  AP D CD YS+CGA A C  NS  +  C CL+GF PK
Sbjct: 265 NNTGKLHRFI-QSKQNQWILANTAPEDECDYYSICGAYAVCGINSKNTPSCSCLQGFKPK 323

Query: 308 SPNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNA--SMNLKECSELCS 360
           S   W     + GCV E    C   D F K+  LKLPDTS SW++A   M L++C   CS
Sbjct: 324 SGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKLPDTSWSWYDAKNEMTLEDCKIKCS 383

Query: 361 KNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGII 420
            NCSCTAYAN+D+  GG GCLLWFGDL+DM+EY+  GQD+YIR+   +     ++ VG++
Sbjct: 384 SNCSCTAYANTDIREGGKGCLLWFGDLVDMREYSSFGQDVYIRMGFAKIEFKGREVVGMV 443

Query: 421 IASVLLMAMFIVASLFCIWRKKLKK-QGLT-KMSHMKEDMELWEFDFASIAKATDNFASY 478
           + SV+ +A+ +V    C  +K +K+ +G   +    +ED++L  FD  +I+ ATD+F+  
Sbjct: 444 VGSVVAIAVVLVVVFACFRKKIMKRYRGENFRKGIEEEDLDLPIFDRKTISIATDDFSYV 503

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           N LG GGFGPVYKG L +GQEIAVKRLS  SGQG+EEFKNEV LIA+LQHRNLV+LLGCC
Sbjct: 504 NFLGRGGFGPVYKGKLEDGQEIAVKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCC 563

Query: 539 IQADESMLIYEYMPNKSLDFFIFD------IDWNGLM 569
           IQ +E MLIYEYMPNKSLDFFIFD      +DW   M
Sbjct: 564 IQGEECMLIYEYMPNKSLDFFIFDERRSTELDWKKRM 600

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  477 bits (1228), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/590 (43%), Positives = 364/590 (61%), Gaps = 46/590 (7%)

Query: 15  SAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRE 74
           SA   + + S +I    T+VS    FELGFF PG  ++ YLGIWYK +S RT  WVANR+
Sbjct: 28  SANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVANRD 87

Query: 75  TPLTDQSGLLNVTSKGIVLLDGRDRIFWSSN-TSITMKNPVV-QLMDSGNLVLTDGNYNS 132
           TPL+   G L ++   +V+LD  D   WS+N T   +++P+V +L+D+GN VL D   ++
Sbjct: 88  TPLSSSIGTLKISDSNLVVLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRDSKNSA 147

Query: 133 ---LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQL 189
              +LWQSFD P DTLLP MKLG + KTG +R + SWKS +DP+ G+FS  ++T GFP++
Sbjct: 148 PDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEGFPEI 207

Query: 190 VLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECD-AKGPAVSRLW 248
            L       YR+G WNG+ F+G P ++    +  + F  ++ EV Y     K    SRL 
Sbjct: 208 FLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMV-FNFTTSKEEVTYSFRITKSDVYSRLS 266

Query: 249 VNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKS 308
           ++ SGL+ R  W      W   +YAP D+CD Y  CG    C +N+S  C+C++GF P++
Sbjct: 267 ISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGFKPRN 326

Query: 309 PNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNC 363
           P  W     S+GCVR+  L C  GD F +  K+KLPDT+++  +  + +KEC + C ++C
Sbjct: 327 PQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQKCLRDC 386

Query: 364 SCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS---ERGRSVTKKQVGII 420
           +CTA+AN+D+   GSGC+ W G+L D++ Y  GGQDLY+R+A+   E  R+ + K +G  
Sbjct: 387 NCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVRLAATDLEDKRNRSAKIIGSS 446

Query: 421 I-ASVLLMAMFIVASLFCIWRKKLKKQGLTK---MSHM---------------------- 454
           I  SVLL+  FI+   F +W++K K+  L +   + H                       
Sbjct: 447 IGVSVLLLLSFII---FFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVVISSRRHISRE 503

Query: 455 --KEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQG 512
              +D+EL   +F  +A AT+NF++ NKLG+GGFG VYKG L++GQE+AVKRLSK S QG
Sbjct: 504 NNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQG 563

Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
            +EFKNEV LIARLQH NLV+LL CC+ A E MLIYEY+ N SLD  +FD
Sbjct: 564 TDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFD 613

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  462 bits (1190), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/597 (42%), Positives = 348/597 (58%), Gaps = 47/597 (7%)

Query: 19  DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLT 78
           D I   QS+RDGE ++S    F  GFFS G S  RY+GIWY ++S +T+ WVANR+ P+ 
Sbjct: 20  DTIMRRQSLRDGEVILSAGKRFAFGFFSLGDSELRYVGIWYAQISQQTIVWVANRDHPIN 79

Query: 79  DQSGLLNVTSKG---IVLLDGRDRIFWSSNTSITMKNP--VVQLMDSGNLVLTDGNYNSL 133
           D SG++  +++G   +   D    + WS+N S +M  P  V  L D GNLVL D      
Sbjct: 80  DTSGMVKFSNRGNLSVYASDNETELIWSTNVSDSMLEPTLVATLSDLGNLVLFDPVTGRS 139

Query: 134 LWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRK 193
            W+SFDHP DT LP M+LG   K G+DR L+SWKS  DP  G+  L ++  GFPQL+L K
Sbjct: 140 FWESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDLILRMERRGFPQLILYK 199

Query: 194 GSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAV-SRLWVNQS 252
           G    +R GSW G  ++G P +     + +  FV NE+EV +       +V +R  VN++
Sbjct: 200 GVTPWWRMGSWTGHRWSGVPEMPIGY-IFNNSFVNNEDEVSFTYGVTDASVITRTMVNET 258

Query: 253 GLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSR--RCDCLEGFVPKSPN 310
           G + R  W ++   W   +  P ++CD Y+ CG N  C + SS+   C CL GF PK P 
Sbjct: 259 GTMHRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGYCDSPSSKTFECTCLPGFEPKFPR 318

Query: 311 NW-----SEGCVRERELK-CRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCS 364
           +W     S GC +++    C   D F K  ++K+PDTS +  + ++ LKEC + C KNCS
Sbjct: 319 HWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDASVDMNITLKECKQRCLKNCS 378

Query: 365 CTAYANS--DVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASE------RGRSVTKKQ 416
           C AYA++  + +RG  GCL W G ++D + Y + GQD YIR+  E      R     K++
Sbjct: 379 CVAYASAYHESKRGAIGCLKWHGGMLDARTYLNSGQDFYIRVDKEELARWNRNGLSGKRR 438

Query: 417 VGIIIASVLLMAMFIVASLFCIWRKKLKK------------------QGLTKMSHMKEDM 458
           V +I+ S++   M +   LFC+ R++ K                   +          + 
Sbjct: 439 VLLILISLIAAVMLLTVILFCVVRERRKSNRHRSSSANFAPVPFDFDESFRFEQDKARNR 498

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN 518
           EL  FD  +I  AT+NF+S NKLG GGFGPVYKG L    EIAVKRLS+ SGQGMEEFKN
Sbjct: 499 ELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRLSRNSGQGMEEFKN 558

Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIF------DIDWNGLM 569
           EV LI++LQHRNLV++LGCC++ +E ML+YEY+PNKSLD+FIF      ++DW   M
Sbjct: 559 EVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDYFIFHEEQRAELDWPKRM 615

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  450 bits (1158), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/607 (40%), Positives = 364/607 (59%), Gaps = 58/607 (9%)

Query: 17  ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETP 76
           +++ I  SQS++DG+ + S    F  GFFS G S  RY+GIWY +VS +T+ WVANR+ P
Sbjct: 21  SDNTILRSQSLKDGDVIYSEGKRFAFGFFSLGNSKLRYVGIWYAQVSEQTIVWVANRDHP 80

Query: 77  LTDQSGLLNVTSKGIVLL----DGRDRIFWSSNTSITMKNP--VVQLMDSGNLVLTDGNY 130
           + D SGL+  +++G + +    +G + I WS++    ++ P  V +L D GNLVL D   
Sbjct: 81  INDTSGLIKFSTRGNLCVYASGNGTEPI-WSTDVIDMIQEPALVAKLSDLGNLVLLDPVT 139

Query: 131 NSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLV 190
               W+SF+HP +TLLP MK G   ++G+DR ++SW+S  DP  G  +  I+  GFPQ++
Sbjct: 140 GKSFWESFNHPTNTLLPFMKFGFTRQSGVDRIMTSWRSPGDPGSGNITYRIERRGFPQMM 199

Query: 191 LRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEV---YYECDAKGPAVSRL 247
           + KG  L +R GSW G  ++G P +  N  + +  FV N +EV   Y   DA     +R+
Sbjct: 200 MYKGLTLWWRTGSWTGQRWSGVPEMT-NKFIFNISFVNNPDEVSITYGVLDAS--VTTRM 256

Query: 248 WVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRR--CDCLEGFV 305
            +N++G + R  W+ +   W   + AP D+CD+Y+ CG N  C + S+ +  C CL G+ 
Sbjct: 257 VLNETGTLQRFRWNGRDKKWIGFWSAPEDKCDIYNHCGFNGYCDSTSTEKFECSCLPGYE 316

Query: 306 PKSPNNW-----SEGCVRERELKCRNGDE-FPKYVKLKLPDTSSSWFNASMNLKECSELC 359
           PK+P +W     S+GC R +     NG E F K  ++K+P+TS+   + ++ LKEC + C
Sbjct: 317 PKTPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTSAVNVDMNITLKECEQRC 376

Query: 360 SKNCSCTAYANS--DVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRI-ASERGR-----S 411
            KNCSC AYA++  + + G  GCL W G+++D + Y   GQD Y+R+  SE  R     +
Sbjct: 377 LKNCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTYLSSGQDFYLRVDKSELARWNGNGA 436

Query: 412 VTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQG-----------------------L 448
             KK++ +I+ S++ + M ++ S  C  RK+ ++                         L
Sbjct: 437 SGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLEDSFIL 496

Query: 449 TKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG 508
            ++       EL  F+ ++IA AT+NFA  NKLG GGFGPVYKG L  G EIAVKRLSK 
Sbjct: 497 EELEDKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEIAVKRLSKS 556

Query: 509 SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIF------D 562
           SGQGMEEFKNEV LI++LQHRNLV++LGCC++ +E ML+YEY+PNKSLD+FIF      +
Sbjct: 557 SGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYFIFHEEQRAE 616

Query: 563 IDWNGLM 569
           +DW   M
Sbjct: 617 LDWPKRM 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  447 bits (1149), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/579 (42%), Positives = 350/579 (60%), Gaps = 43/579 (7%)

Query: 22  TPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQS 81
           T S +I   +T++S +  FELGFF+P +S++ YLGIWYK +  RT  WVANR+ PL+  +
Sbjct: 33  TESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSN 92

Query: 82  GLLNVTSKGIVLLDGRDRIFWSSN-TSITMKNPVV-QLMDSGNLVLTDGNYNSLLWQSFD 139
           G L ++   +V+ D  DR  WS+N T   +++PV  +L+D+GN +L D N N LLWQSFD
Sbjct: 93  GTLKISGNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDNGNFLLRDSN-NRLLWQSFD 151

Query: 140 HPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQY 199
            P DTLL  MKLG + KTG +R L SWK+ +DP+ GEFS  ++T  FP+  +     + Y
Sbjct: 152 FPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSKESILY 211

Query: 200 RAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDA-KGPAVSRLWVNQSGLVLRS 258
           R+G WNG+ F+  P   + V    Y F  ++ EV Y     K    SRL++N +GL+ R 
Sbjct: 212 RSGPWNGMRFSSVPGTIQ-VDYMVYNFTASKEEVTYSYRINKTNLYSRLYLNSAGLLQRL 270

Query: 259 IWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNW-----S 313
            W      W   +Y+P D CD Y VCG    C +NS   C C++GF P +   W     S
Sbjct: 271 TWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKGFKPVNEQAWDLRDGS 330

Query: 314 EGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDV 373
            GC+R+  L C   D F +  ++KLPDT+++  +  + LK C E C ++C+CTA+AN+D+
Sbjct: 331 AGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKERCLEDCNCTAFANADI 390

Query: 374 ERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS---ERGRSVTKKQVGIII-ASVLLMAM 429
             GGSGC++W  +++DM+ Y  GGQDLY+R+A+   E  R   +K +G  I  S+LL+  
Sbjct: 391 RNGGSGCVIWTREILDMRNYAKGGQDLYVRLAAAELEDKRIKNEKIIGSSIGVSILLLLS 450

Query: 430 FIVASLFCIWRKKLKK--------------------------QGLTKMSHMKEDMELWEF 463
           F++   F  W++K K+                          +G T      E +EL   
Sbjct: 451 FVI---FHFWKRKQKRSITIQTPNVDQVRSQDSLINDVVVSRRGYTSKEKKSEYLELPLL 507

Query: 464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
           +  ++A AT+NF++ NKLG+GGFG VYKG L++G+EIAVKRLSK S QG +EF NEV LI
Sbjct: 508 ELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRLSKMSSQGTDEFMNEVRLI 567

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           A+LQH NLV+LLGCC+   E MLIYEY+ N SLD  +FD
Sbjct: 568 AKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFD 606

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/594 (40%), Positives = 363/594 (61%), Gaps = 56/594 (9%)

Query: 22  TPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQS 81
           T S +I   +TLVS    FE+GFF   T+++ YLG+WYK+VS RT  WVANR+ PL++  
Sbjct: 39  TESLTISSNKTLVSPGSIFEVGFFR--TNSRWYLGMWYKKVSDRTYVWVANRDNPLSNAI 96

Query: 82  GLLNVTSKGIVLLDGRDR-IFWSSNTSITMKNPVV-QLMDSGNLVLTDGNYN---SLLWQ 136
           G L ++   +VLLD  ++ ++W++ T    ++PVV +L+ +GN V+ D + N     LWQ
Sbjct: 97  GTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQ 156

Query: 137 SFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSV 196
           SFD+P DTLLP MKLG N KTG++R L+SW+S +DP+ G FS  ++T   P+  L + + 
Sbjct: 157 SFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENF 216

Query: 197 LQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAV-SRLWVNQSGLV 255
             +R+G WNG+ F+G P   + +    Y F+ N  EV Y       +  SRL +   G  
Sbjct: 217 PMHRSGPWNGIRFSGIPE-DQKLSYMVYNFIENNEEVAYTFRMTNNSFYSRLTLISEGYF 275

Query: 256 LRSIWSSQQDVWFLAYYAPLD-RCDLYSVCGANARCTTNSSRRCDCLEGFVPKSPNNWSE 314
            R  W     +W   + +P+D +CD Y +CG  A C  N+S  C+C++GF P++   W +
Sbjct: 276 QRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVCNCIQGFNPRNIQQWDQ 335

Query: 315 -----GCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYA 369
                GC+R  +L C +GD F +  K+KLP+T+ +  + S+ +KEC + C  +C+CTA+A
Sbjct: 336 RVWAGGCIRRTQLSC-SGDGFTRMKKMKLPETTMATVDRSIGVKECKKRCISDCNCTAFA 394

Query: 370 NSDVERGGSGCLLWFGDLMDMKEYNDG---GQDLYIRIASERGRSVTKKQ--VGIIIASV 424
           N+D+  GGSGC++W   L D++ Y      GQDLY+R+A+     + KK+   G II+  
Sbjct: 395 NADIRNGGSGCVIWTERLEDIRNYATDAIDGQDLYVRLAAA---DIAKKRNASGKIISLT 451

Query: 425 LLMAMFIVASLFCIWRKKLKKQGLTKMS--------------------------HMKEDM 458
           + +++ ++  +FC+W++K K+   + +S                          +  E++
Sbjct: 452 VGVSVLLLLIMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEEL 511

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN 518
           EL   +  ++ KAT+NF+S NKLG+GGFG VYKG L++G+EIAVKRLSK S QG +EF N
Sbjct: 512 ELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMN 571

Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIF------DIDWN 566
           EVTLIARLQH NLV++LGCCI+ DE MLIYEY+ N SLD ++F       ++WN
Sbjct: 572 EVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWN 625

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  439 bits (1130), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/588 (41%), Positives = 348/588 (59%), Gaps = 45/588 (7%)

Query: 16  AANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRET 75
           A+N + T S +I   +T++S +  FELGFF+P +S++ YLGIWYK +  RT  WVANR+ 
Sbjct: 27  ASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDN 86

Query: 76  PLTDQSGLLNVTSKGIVLLDGRDRIFWSSN-TSITMKNPVV-QLMDSGNLVLTDGNYNS- 132
           PL+  +G L ++   +V+ D  DR  WS+N T   +++PV  +L+D GN VL D   N  
Sbjct: 87  PLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKP 146

Query: 133 --LLWQSFDHPCDTLLPGMKLGRNFKTG-MDRHLSSWKSINDPAPGEFSLWIDTHGFPQL 189
              LWQSFD P DTLL  MK+G + K+G  +R L SWK+ +DP+ G+FS  + T GFP+ 
Sbjct: 147 SGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEF 206

Query: 190 VLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDA-KGPAVSRLW 248
            +     + YR+G W G  F+  P +K  V   D  F  N  +V Y     K    S L 
Sbjct: 207 YIYNKESITYRSGPWLGNRFSSVPGMKP-VDYIDNSFTENNQQVVYSYRVNKTNIYSILS 265

Query: 249 VNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKS 308
           ++ +GL+ R  W      W   +Y+P D CD Y  CG    C  N+S  C+C++GF P +
Sbjct: 266 LSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMN 325

Query: 309 PN----NWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCS 364
                 + S GCVR+ +L C   D F +  K++LPDT+ +  +  + LKEC E C K C+
Sbjct: 326 EQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCN 385

Query: 365 CTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS---ERGRSVTKKQVGIII 421
           CTA+AN+D+  GGSGC++W G L D++ Y  GGQDLY+R+A+   E  R  +KK +G  I
Sbjct: 386 CTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRIKSKKIIGSSI 445

Query: 422 -ASVLLMAMFIVASLFCIWRKKLKK--------------------------QGLTKMSHM 454
             S+LL+  FI+   F  W++K K+                          +  T   + 
Sbjct: 446 GVSILLLLSFII---FHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTSKENK 502

Query: 455 KEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME 514
            + +EL   ++ ++A AT+NF++ NKLG+GGFG VYKG L++G+EIAVKRLSK S QG +
Sbjct: 503 TDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTD 562

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           EF NEV LIA+LQH NLV+LLGCC+   E MLIYEY+ N SLD  +FD
Sbjct: 563 EFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFD 610

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  435 bits (1119), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/590 (41%), Positives = 344/590 (58%), Gaps = 45/590 (7%)

Query: 12  LGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVA 71
           L  S    + T S +I   +T+VS  G FELGFF        YLGIWYK++S RT  WVA
Sbjct: 28  LSISVNTLSATESLTISSNKTIVSPGGVFELGFFRI-LGDSWYLGIWYKKISQRTYVWVA 86

Query: 72  NRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVV-QLMDSGNLVLTDGNY 130
           NR+TPL++  G+L +++  +V+LD  D   WS+N +  +++ VV +L+D+GN VL     
Sbjct: 87  NRDTPLSNPIGILKISNANLVILDNSDTHVWSTNLTGAVRSSVVAELLDNGNFVLRGSKI 146

Query: 131 NS---LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFP 187
           N     LWQSFD P DTLLP MKLGR+ K G++R ++SWKS  DP+ G F   ++T G P
Sbjct: 147 NESDEFLWQSFDFPTDTLLPQMKLGRDHKRGLNRFVTSWKSSFDPSSGSFMFKLETLGLP 206

Query: 188 QLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGP-AVSR 246
           +       +  YR+G W+GL F+G   +++   +  Y F  N  EV Y        + SR
Sbjct: 207 EFFGFTSFLEVYRSGPWDGLRFSGILEMQQWDDII-YNFTENREEVAYTFRVTDHNSYSR 265

Query: 247 LWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVP 306
           L +N  G +   +W   Q  W + ++ P D CDLY +CG  A C  ++S  C+C++GF P
Sbjct: 266 LTINTVGRLEGFMWEPTQQEWNMFWFMPKDTCDLYGICGPYAYCDMSTSPTCNCIKGFQP 325

Query: 307 KSPNNWSEG-----CVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSK 361
            SP +W+ G     C R+ +L C   D F + + +K+P T+++  +  + LKEC E C  
Sbjct: 326 LSPQDWASGDVTGRCRRKTQLTC-GEDRFFRLMNMKIPATTAAIVDKRIGLKECEEKCKT 384

Query: 362 NCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS----ERGRSVTKKQV 417
           +C+CTAYANSD+  GGSGC++W G+  D++ Y   GQDL++R+A+    ER     K   
Sbjct: 385 HCNCTAYANSDIRNGGSGCIIWIGEFRDIRNYAADGQDLFVRLAAAEFGERRTIRGKIIG 444

Query: 418 GIIIASVLLMAMFIVASLFCIWRKKLKKQGLTK--MSHMKEDMEL--------------- 460
            II  S++L+  FI+   +C W+KK K+   T   + +     EL               
Sbjct: 445 LIIGISLMLVLSFII---YCFWKKKQKRARATAAPIGYRDRIQELIITNGVVMSSGRRLL 501

Query: 461 --------WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQG 512
                      +F ++  AT+NF+  N LG GGFG VYKG L++GQEIAVKRLS+ S QG
Sbjct: 502 GEEEDLELPLTEFETVVMATENFSDSNILGRGGFGIVYKGRLLDGQEIAVKRLSEMSSQG 561

Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
             EFKNEV LIARLQH NLV+LL CCI ADE +LIYEY+ N SLD  +F+
Sbjct: 562 TNEFKNEVRLIARLQHINLVRLLSCCIYADEKILIYEYLENGSLDSHLFE 611

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  415 bits (1067), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/616 (40%), Positives = 341/616 (55%), Gaps = 66/616 (10%)

Query: 9   LFILGASAANDNITPSQSIRDG---ETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPR 65
            F+  +S A + I   +S+RDG   + LVS   TFELGFFSPG+S  R+LGIWY  +  +
Sbjct: 17  FFLYESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIWYGNIEDK 76

Query: 66  TVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSN---TSITMKNPVVQLMDSG 121
            V WVANR TP++DQSG+L +++ G +VLLDG++   WSSN   ++    N VV + D+G
Sbjct: 77  AVVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRVVSIHDTG 136

Query: 122 NLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWI 181
           N VL++ + +  +W+SF+HP DT LP M++  N +TG +    SW+S  DP+PG +SL +
Sbjct: 137 NFVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGV 196

Query: 182 DTHGFPQLVLRKGS-VLQYRAGSWNGLGFTGTP--PLKENVPLCDYKFVINENE---VYY 235
           D  G P++VL +G+   ++R+G WN   FTG P   L  N  L  +K     +E   VY+
Sbjct: 197 DPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNY-LYGFKLSSPPDETGSVYF 255

Query: 236 ECDAKGPAV-SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNS 294
                 P+V  R  V  +G      W+     W      P   CD Y+ CG    C    
Sbjct: 256 TYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKG 315

Query: 295 SRR-CDCLEGFVPKSPNNWSEGCVRERELKCRNG-----DEFPKYVKLKLPDTSSSWFNA 348
           S   C C+ G+   S  NWS GC R   LKC        DEF     +KLPD      N 
Sbjct: 316 SNGICSCIHGYEQVSVGNWSRGCRRRTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNL 375

Query: 349 SMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASER 408
            ++ ++C E C +NCSC AY+      GG GC++W  DL+D++++  GG  L+IR+A   
Sbjct: 376 -VDPEDCRERCLRNCSCNAYSLV----GGIGCMIWNQDLVDLQQFEAGGSSLHIRLADSE 430

Query: 409 GRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQ-----------------GLTKM 451
                K ++ +I+A VL+  + I      +WR K KK                   LTK 
Sbjct: 431 VGENRKTKIAVIVA-VLVGVILIGIFALLLWRFKRKKDVSGAYCGKNTDTSVVVADLTKS 489

Query: 452 SHMKEDM----------------ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV 495
                                  EL  F   +IA AT++F   N+LG GGFGPVYKG L 
Sbjct: 490 KETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLE 549

Query: 496 EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS 555
           +G+EIAVKRLS  SGQG++EFKNE+ LIA+LQHRNLV+LLGCC + +E ML+YEYMPNKS
Sbjct: 550 DGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKS 609

Query: 556 LDFFIFD------IDW 565
           LDFF+FD      IDW
Sbjct: 610 LDFFLFDETKQALIDW 625

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	579
255575986	1597	ATP binding protein, putative [Ricinus c	0.974	0.353	0.569	0.0
224122958	812	predicted protein [Populus trichocarpa]	0.975	0.695	0.551	1e-180
224122978	831	predicted protein [Populus trichocarpa]	0.956	0.666	0.567	1e-176
255587572	822	S-locus-specific glycoprotein S6 precurs	0.955	0.672	0.530	1e-172
147799241	818	hypothetical protein VITISV_027305 [Viti	0.967	0.684	0.528	1e-170
359493727	1767	PREDICTED: uncharacterized protein LOC10	0.963	0.315	0.522	1e-170
224122966	783	predicted protein [Populus trichocarpa]	0.911	0.674	0.550	1e-169
255575982	759	S-locus-specific glycoprotein S6 precurs	0.962	0.733	0.518	1e-169
359493715	1603	PREDICTED: uncharacterized protein LOC10	0.981	0.354	0.526	1e-167
224115102	784	predicted protein [Populus trichocarpa]	0.918	0.678	0.545	1e-166

>gi|255575986|ref|XP_002528889.1| ATP binding protein, putative [Ricinus communis] gi|223531688|gb|EEF33513.1| ATP binding protein, putative [Ricinus communis]

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/588 (56%), Positives = 423/588 (71%), Gaps = 24/588 (4%)

Query: 1   MLGAYSCLLFILGASAANDN-ITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWY 59
           M+  Y  LLF+   S +  N I PSQS++DGETLVS +G FELGFF+P  S  RYLGIWY
Sbjct: 1   MVWVYLFLLFLSHTSVSGLNTINPSQSVKDGETLVSADGGFELGFFNPNNSENRYLGIWY 60

Query: 60  KRVSPRTVAWVANRETPLTDQSGLLNVTSKGI-VLLDGRDRIFWSSNTSITMKNPVVQLM 118
           K VS   V WVANRETPLT+ SG+L+ T +GI +LLDG++   WSS  +   +NP+VQL+
Sbjct: 61  KEVSAYAVVWVANRETPLTESSGVLSFTKEGILILLDGKNNTIWSSKKAKNSQNPLVQLL 120

Query: 119 DSGNLVLTDGNYNS---LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPG 175
           DSGNLV+ DGN +S    LWQSFD PCDT LPGMK+GRNF TG D  ++SWKS ++P  G
Sbjct: 121 DSGNLVVKDGNDSSSDNFLWQSFDSPCDTFLPGMKIGRNFLTGQDWFITSWKSADNPGKG 180

Query: 176 EFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYY 235
           +FSLWID  GFPQLVLR G+   YR GSWNGL FTGTP + ++      +F + +N VYY
Sbjct: 181 QFSLWIDPDGFPQLVLRNGTSKYYRLGSWNGLYFTGTPQVPQD--FLKLEFELTKNGVYY 238

Query: 236 ECDAKGPA--VSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTN 293
             +  G +  ++RL+VN+SG V R     +   W   Y+APLD+CD Y VCGA  +C  N
Sbjct: 239 GYEVHGYSKLMTRLFVNRSGFVQRFARVDRTVGWRNIYFAPLDQCDKYDVCGAYMKCNIN 298

Query: 294 -SSRRCDCLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNL 352
            +S  C CLEGFV +SP NWS+GCVR+  L C  GD F  Y++LKLPDTS SW+N +M+L
Sbjct: 299 DNSPNCVCLEGFVFRSPKNWSDGCVRKTPLHCEKGDVFQTYIRLKLPDTSGSWYNTTMSL 358

Query: 353 KECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSV 412
            EC ELCS NCSCTAYANS++  GGSGCLLWFG+L+D++EY +GGQ++YIR++S +    
Sbjct: 359 SECKELCSTNCSCTAYANSNISNGGSGCLLWFGELVDIREYTEGGQEIYIRMSSSKPDQT 418

Query: 413 TKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHM--------KEDMELWEFD 464
             K +G  + + +L+ M +V SL  I +K+ + QGLTK SH+        KE+MEL  FD
Sbjct: 419 KNKLIGTTVGAAVLIGMLVVGSLVYIRKKEQRMQGLTKGSHINDYENNAGKEEMELPIFD 478

Query: 465 FASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIA 524
           F +I KATDNF++ NKLG+GGFGPVYKG L +GQEIAVKRLSK SGQG+ EF+NEV LI+
Sbjct: 479 FTAIVKATDNFSNNNKLGQGGFGPVYKGILTDGQEIAVKRLSKSSGQGLTEFENEVILIS 538

Query: 525 RLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDWN 566
           +LQHRNLVKLLG CIQ DE MLIYE+MPNKSLDFF+FD      +DW+
Sbjct: 539 KLQHRNLVKLLGYCIQKDEKMLIYEFMPNKSLDFFVFDEMRCKFLDWD 586

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122958|ref|XP_002330406.1| predicted protein [Populus trichocarpa] gi|222871791|gb|EEF08922.1| predicted protein [Populus trichocarpa]

 Score =  639 bits (1649), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 330/598 (55%), Positives = 417/598 (69%), Gaps = 33/598 (5%)

Query: 4   AYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVS 63
            YS    IL  S+A D +  +QS+RDGETLVS  G+FELGFF+P  S  RYLG+WYK+ S
Sbjct: 9   VYSLFFSILKISSALDAMNTTQSLRDGETLVSTGGSFELGFFTPAGSTSRYLGLWYKK-S 67

Query: 64  PRTVAWVANRETPLTDQSGLLNVTSKGI-VLLDGRDRIFWSSNTSITMKNPVVQLMDSGN 122
           P+TV WVANR  P++++ G LNVTS+GI VLL+G + I WSSNTS T++NPV QL+DSGN
Sbjct: 68  PQTVVWVANRGIPISNKFGTLNVTSQGILVLLNGTNNIVWSSNTSTTVQNPVAQLLDSGN 127

Query: 123 LVLTDGNYN---SLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSL 179
           LV+ DGN N   + LWQSFD+PCDTLLPGMKLG N  TG++  LSSWK   +PAPG+F+L
Sbjct: 128 LVVRDGNDNKADNFLWQSFDYPCDTLLPGMKLGSNLVTGLNSFLSSWKGKENPAPGQFTL 187

Query: 180 WIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDA 239
            ID  G+PQL+LRK + + YR GSWNG  FTG P LK + P+  ++FV N NEVY++ + 
Sbjct: 188 GIDVQGYPQLILRKETRIMYRVGSWNGQYFTGFPELKPD-PIYTFEFVFNRNEVYFKFEL 246

Query: 240 KGPAV-SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRC 298
           +  +V SRL V  SGLV    WS Q + W++   A +DRC+ Y++CGANARC +NSS  C
Sbjct: 247 QNSSVFSRLTVTPSGLVQLFTWSHQTNDWYVFATAVVDRCENYALCGANARCDSNSSPVC 306

Query: 299 DCLEGFVPKSP-----NNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLK 353
           DCL+GF+ KSP      NW+ GC+R   L C + D F  Y  +KLPDTSSSW++ S +L 
Sbjct: 307 DCLDGFIHKSPTEWNSQNWTGGCIRRTPLDCTDKDGFQSYTGVKLPDTSSSWYDDSFSLV 366

Query: 354 ECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERG---- 409
           EC  LC +NCSC AYAN D    GSGCL WFGDL+D +   +GGQD+YIR+A+ +     
Sbjct: 367 ECEGLCIQNCSCFAYANLDFRGRGSGCLRWFGDLIDTRRLAEGGQDIYIRLAASQSGVTG 426

Query: 410 --RSVTKKQVGIIIASVLL-MAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFA 466
             +   K   G+I  +V+L  ++ I+  +FCI R+K +K G  +    +E+MEL   D  
Sbjct: 427 EKKRKKKTHAGVIGGAVILGSSILILGIVFCIRRRKHRKNGNFE-DRKEEEMELPMLDLT 485

Query: 467 SIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL 526
           +I  ATDNF+S  KLGEGGFG VYKG L+EGQEIAVKRLSK SGQG+ EFKNEV LIA+L
Sbjct: 486 TIEHATDNFSSSKKLGEGGFGAVYKGELIEGQEIAVKRLSKSSGQGLNEFKNEVLLIAKL 545

Query: 527 QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDWNGLMLTRSSKSHI 578
           QHRNLVKLLGCCI  DE MLIYEYMPN+SLD FIFD      +DW       S ++HI
Sbjct: 546 QHRNLVKLLGCCIHEDEKMLIYEYMPNRSLDSFIFDPTRRKFLDW-------SKRTHI 596

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122978|ref|XP_002330411.1| predicted protein [Populus trichocarpa] gi|222871796|gb|EEF08927.1| predicted protein [Populus trichocarpa]

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 329/580 (56%), Positives = 403/580 (69%), Gaps = 26/580 (4%)

Query: 8   LLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTV 67
            L I    A+ D +TP QSIRDG+ LVS +G+FELGFFSPG S  RYLGIWY+++S  TV
Sbjct: 16  FLLISAIRASTDTLTPGQSIRDGDLLVSADGSFELGFFSPGISKGRYLGIWYQKISAGTV 75

Query: 68  AWVANRETPLTDQSGLLNVTSKGI-VLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLT 126
            WVANRETPL D SG L VT +GI +LL+      WSSN S T +NPV++L+DSGNLV+ 
Sbjct: 76  VWVANRETPLNDSSGALIVTDQGILILLNSSKDAIWSSNASRTAQNPVMKLLDSGNLVVK 135

Query: 127 DGNYNS--LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTH 184
           D N NS   LWQSFD+P DTLLPGMK GRN  TG+DR+LSSWKS NDPA GEF+  ID  
Sbjct: 136 DINDNSENFLWQSFDYPGDTLLPGMKWGRNMVTGLDRYLSSWKSSNDPAQGEFTFRIDPR 195

Query: 185 GFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAV 244
           G  Q++L +G  + YR G+WNG  +TGTP L+ N+ L  Y F+    E+YY+ D    +V
Sbjct: 196 GNTQMLLMRGPKILYRTGTWNGYRWTGTPQLEPNM-LYTYGFISTATEMYYKFDLINSSV 254

Query: 245 -SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEG 303
            SR+ +N SG   R  W ++ + W       LD+CD Y++CGA   C  N    C CLEG
Sbjct: 255 ASRIVMNSSGAAQRFTWITRTNSWARFSAVLLDQCDDYALCGAYGSCNVNKQPVCACLEG 314

Query: 304 FVPKSPNNWS-----EGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSEL 358
           F+PKSP +WS     +GCVR  +L C  GD F ++  +KLPD   SW + S  LKEC +L
Sbjct: 315 FIPKSPKDWSIQEWSDGCVRRTKLDCDKGDRFLQHGGVKLPDMIKSWVDTSKGLKECKDL 374

Query: 359 CSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS------ERGRSV 412
           C KNCSC AYANSD+  GGSGCLLWF +L+D +E   GGQDLYIRIA+      E+ RS 
Sbjct: 375 CLKNCSCVAYANSDIRGGGSGCLLWFDELIDTRELTTGGQDLYIRIAASELYNIEKNRSS 434

Query: 413 TKKQVGIIIASVLLMAMFIV-ASLFCIWRKKLKKQGLTKMSHM---------KEDMELWE 462
            KKQ+GII+ +++ +   +V A +    RKKLKKQ   K SH+         KEDMEL  
Sbjct: 435 DKKQLGIIVGTIITIVGVLVLAFILYARRKKLKKQANMKTSHLQNYEDEDQRKEDMELPT 494

Query: 463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTL 522
           FD ++IA ATDNF+S NKLGEGGFG VYKGTL+EGQE+AVKRLSK SGQG+ EFKNEV L
Sbjct: 495 FDLSTIANATDNFSSRNKLGEGGFGSVYKGTLIEGQEVAVKRLSKNSGQGLTEFKNEVIL 554

Query: 523 IARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           IA+LQHRNLVKLLGCCI+ DE +LIYEYMPNKSLD+FIFD
Sbjct: 555 IAKLQHRNLVKLLGCCIEGDERILIYEYMPNKSLDYFIFD 594

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587572|ref|XP_002534316.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223525508|gb|EEF28065.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 321/605 (53%), Positives = 406/605 (67%), Gaps = 52/605 (8%)

Query: 11  ILGASAAN-DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAW 69
           +L  SAA  + + P QS++DGETL+S +G FELGFFS G S  RYLGIWYKR+  +TV W
Sbjct: 1   MLRVSAAQLETLYPGQSMKDGETLISADGNFELGFFSQGDSRSRYLGIWYKRIPVKTVVW 60

Query: 70  VANRETPLTDQSGLLNVTSKGIVLLDGRDR-IFWSSNTSITMKNPVVQLMDSGNLVLTDG 128
           V NRE P  D  G+L V  +G+++L    + I WSSN+S T KNPV+QL+DSGNL++ DG
Sbjct: 61  VGNREVPSFDNLGVLQVNEQGVIILQNSTKGIIWSSNSSRTAKNPVLQLLDSGNLIVKDG 120

Query: 129 NYNS---LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHG 185
           N N+   ++WQSFD P +TLLP MKLG N   G++R+L+SWKSI+DPA G FS  ID  G
Sbjct: 121 NGNNPDNIVWQSFDFPYNTLLPSMKLGWNLDKGLNRYLTSWKSIDDPAQGNFSCLIDLRG 180

Query: 186 FPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAV- 244
           FPQL ++KG  +Q R+G WNGL FTG+P L  N P+ ++ FV N++E+YY  + K  +V 
Sbjct: 181 FPQLFMKKGDAVQVRSGPWNGLQFTGSPQLNPN-PVFNFSFVSNKHEIYYSYELKNTSVV 239

Query: 245 SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGF 304
           SRL V++ G + R  W  +   W L +  P D+CD Y +CGA A C  NS   C CLEGF
Sbjct: 240 SRLIVSEKGALERHNWIDRTQSWTLFFSVPTDQCDTYLLCGAYASCNINSYPVCSCLEGF 299

Query: 305 VPKSP-----NNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELC 359
           VPKSP     ++WS+GCVR  EL C  GD F K   +KLPDTSSSW + SM+LKEC  +C
Sbjct: 300 VPKSPTDWSASDWSDGCVRRTELSCHTGDGFRKLKGMKLPDTSSSWVDMSMDLKECEGMC 359

Query: 360 SKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIA-SERGRSVTKKQVG 418
            +NCSC AYANSD+   GSGCLLWF  L+DM+++ +GGQDLYIRIA SE  +  +  +  
Sbjct: 360 LRNCSCLAYANSDIR--GSGCLLWFDHLIDMRKFTEGGQDLYIRIAASELAKGKSHGKRV 417

Query: 419 IIIASVLLMAMFIVASLFCIWRKKLKKQ-----------------------GLTKMSHM- 454
            II S L++ M + A    ++ +K K+                        GL K +++ 
Sbjct: 418 AIIVSCLIIGMGMTALGSLLYTRKRKRNILGQAVPLVLLVSSFAIHFYIISGLAKETYIE 477

Query: 455 -------KEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSK 507
                  KED EL  FD  +I  AT NF++YNKLGEGGFGPVYKGTL++GQEIAVKRLS+
Sbjct: 478 NYGDNGAKEDTELIAFDLITIRNATGNFSNYNKLGEGGFGPVYKGTLLDGQEIAVKRLSE 537

Query: 508 GSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD----- 562
            SGQG +EFKNEV LIARLQHRNLVKLLGCCI  DE MLIYEYMPNKSLD FIFD     
Sbjct: 538 TSGQGGKEFKNEVILIARLQHRNLVKLLGCCIHGDEKMLIYEYMPNKSLDSFIFDKKRSM 597

Query: 563 -IDWN 566
            +DW+
Sbjct: 598 LLDWH 602

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799241|emb|CAN77004.1| hypothetical protein VITISV_027305 [Vitis vinifera]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 311/588 (52%), Positives = 416/588 (70%), Gaps = 28/588 (4%)

Query: 5   YSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSP 64
           +S ++ IL  S A D+IT +Q I+DGET++S  G FELGF   GTS  +YLGIWYK+V+P
Sbjct: 11  FSYVISILRISTAVDSITANQHIKDGETIISAGGNFELGFVHLGTSKNQYLGIWYKKVTP 70

Query: 65  RTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNL 123
           RTV WVANRE P+TD SG L VT +G +V+L+G + + WSSN+S + +NP  QL+DSGNL
Sbjct: 71  RTVVWVANRELPVTDSSGXLKVTDQGSLVILNGSNGLIWSSNSSRSARNPTAQLLDSGNL 130

Query: 124 VLTDGN---YNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLW 180
           V+  GN    ++ LWQSFD+P DTLLPGMK GRN  TG+DR+LSSWKS +DP+ G+F+  
Sbjct: 131 VIKSGNDSDPDNFLWQSFDYPGDTLLPGMKHGRNTVTGLDRYLSSWKSNDDPSKGDFTYG 190

Query: 181 IDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAK 240
           +D  G PQL LR GS + +R+G WNG+ F G P L+ N P+ +Y FV NE E+Y+     
Sbjct: 191 LDPSGCPQLFLRSGSTVIFRSGPWNGIRFNGFPELRPN-PVFNYSFVFNEKEMYFTYKLV 249

Query: 241 GPAV-SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCD 299
             +V SRL +N +G V R IW  +   W +   A  D CD Y++CGA + C  + S RC 
Sbjct: 250 NSSVLSRLVLNPNGNVQRLIWIGRTKSWNVYSTAYKDDCDSYALCGAYSTCNIHRSPRCG 309

Query: 300 CLEGFVPKSPN-----NWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKE 354
           C++GFVPK P      +WS GCVR+  L C+ GD F KY  +KLPDT +SWFN SMNLKE
Sbjct: 310 CMKGFVPKFPYQWDTMDWSNGCVRKTSLDCQKGDGFAKYSGVKLPDTRNSWFNESMNLKE 369

Query: 355 CSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTK 414
           C+ LC +NCSC+AY NSD++ GGSGCLLWFGDL+D+KE+ + GQD YIR+A+    +++K
Sbjct: 370 CASLCFRNCSCSAYTNSDIKGGGSGCLLWFGDLIDIKEFTENGQDFYIRMAASELDAISK 429

Query: 415 --KQVGIIIASVLLMAMFIVASLFCIW--RKKLKKQGLTKMSH-------MKEDMELWEF 463
             K+  +I+++V +  M +++ +  ++  +K+LK++G T++++        +ED+EL  F
Sbjct: 430 VTKRRWVIVSTVSIAGMILLSLVVTLYLLKKRLKRKGTTELNNEGAETNERQEDLELPLF 489

Query: 464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
              +I  AT NF+  NKLGEGGFGPVYKG L +G+EIAVKRLSK S QG++EFKNEV  I
Sbjct: 490 XLDTILNATHNFSRNNKLGEGGFGPVYKGMLQDGKEIAVKRLSKESNQGLDEFKNEVIYI 549

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDW 565
           ++LQHRNLVKLLGCCI  +E MLIYEYMPNKSL+FFIFD      +DW
Sbjct: 550 SKLQHRNLVKLLGCCIHGEEKMLIYEYMPNKSLNFFIFDGIQSMVLDW 597

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493727|ref|XP_002280656.2| PREDICTED: uncharacterized protein LOC100243545 [Vitis vinifera]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/578 (52%), Positives = 398/578 (68%), Gaps = 20/578 (3%)

Query: 5   YSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSP 64
           +S +L +L  S A D I  +Q+I DGET+ S  G+FELGFFSPG S  RYLGIWYK+ S 
Sbjct: 11  FSYVLSLLRISVAVDTIIVNQNITDGETITSAGGSFELGFFSPGNSKNRYLGIWYKKASK 70

Query: 65  RTVAWVANRETPLTDQSGLLNVTSKGI-VLLDGRDRIFWSSNTSITMKNPVVQLMDSGNL 123
           + V WVANRE+P+TD SG+L VT  GI VL++G + I W+S +S + ++P  QL++SGNL
Sbjct: 71  KPVVWVANRESPITDSSGVLKVTQPGILVLVNGTNGILWNSTSSRSAQDPNAQLLESGNL 130

Query: 124 VLTDGN---YNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLW 180
           V+ +GN     + LWQSFD+PCDTLLPGMKLGRN   G+DR+LSSWKS +DP+ G F+ W
Sbjct: 131 VMRNGNDRDPENFLWQSFDYPCDTLLPGMKLGRNRVAGLDRYLSSWKSADDPSKGNFTYW 190

Query: 181 IDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECD-A 239
           ID  GFPQL+LR G  + +R G WNG+ F+G P L  N P+  Y++V NE E+YY     
Sbjct: 191 IDPSGFPQLLLRNGLAVAFRPGPWNGIRFSGIPQLTIN-PVYSYEYVSNEKEIYYIYSLV 249

Query: 240 KGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCD 299
               + RL +   G   RSIW+ +++ W L   A  D+CD Y++CG N  C  + S  C+
Sbjct: 250 NSSVIMRLVLTPDGAAQRSIWTDKKNEWTLYSTAQRDQCDNYAICGVNGICKIDQSPNCE 309

Query: 300 CLEGFVPKSPNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKE 354
           C++GF PK  +NW     S GCVR   L C+ GD F KY  +KLPDT SSWFN SMNLKE
Sbjct: 310 CMKGFRPKFQSNWDMEDWSNGCVRSTPLDCQKGDGFVKYSGVKLPDTRSSWFNESMNLKE 369

Query: 355 CSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTK 414
           C+ LC  NCSCTAYANSD+  GGSGCLLWFGDL+D++++ + GQ+ Y+R+A+    +  +
Sbjct: 370 CASLCLSNCSCTAYANSDIRGGGSGCLLWFGDLIDIRDFTENGQEFYVRMAAADLETTKE 429

Query: 415 KQVGIIIASVLLMAMFIVASL-FCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATD 473
           K++G  + S+ + ++ + + L F  + +   K G  + +  +E +EL  FD  ++  AT+
Sbjct: 430 KRLGNRLNSIFVNSLILHSILHFAAYMEHNSKGG--ENNEGQEHLELPLFDLDTLLNATN 487

Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
           NF+S NKLGEGGFGPVYKG L EGQEIAVK +SK S QG++EFKNEV  IA+LQHRNLVK
Sbjct: 488 NFSSDNKLGEGGFGPVYKGILQEGQEIAVKMMSKTSRQGLKEFKNEVESIAKLQHRNLVK 547

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFIFD------IDW 565
           LLGCCI   E +LIYE+MPNKSLD FIFD      +DW
Sbjct: 548 LLGCCIHGRERLLIYEHMPNKSLDLFIFDQMRRRVLDW 585

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122966|ref|XP_002330408.1| predicted protein [Populus trichocarpa] gi|222871793|gb|EEF08924.1| predicted protein [Populus trichocarpa]

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 315/572 (55%), Positives = 391/572 (68%), Gaps = 44/572 (7%)

Query: 8   LLFILGASAANDNITPSQSIRDGET-LVSVNGTFELGFFSPGTSAKRYLGIWYKR--VSP 64
           LLF+  A A  DNIT ++SI+DGE+ LVS  GTFELGFFSPG S  R+LG+WYK    + 
Sbjct: 21  LLFLSLAFATQDNITSNESIKDGESPLVSAGGTFELGFFSPGNSMNRFLGVWYKNELSTH 80

Query: 65  RTVAWVANRETPLTDQSGLLNVTSKGIVLL-DGRDRIFWSSNTSITMKNPVVQLMDSGNL 123
           + V WVANRE PL D+SG LN T +G++LL +G +   WSSN +  +++PV+QL+DSGNL
Sbjct: 81  KEVIWVANREIPLKDRSGFLNFTQQGVLLLFNGNNERIWSSNKTTNVESPVMQLLDSGNL 140

Query: 124 VLTDGNYNS-LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWID 182
           V+ DG  N+ +LWQSF++PCDT LPGM +G N +TG+DR+L SWKS +DP PG+FS  ID
Sbjct: 141 VVIDGKDNNFILWQSFEYPCDTFLPGMMIGGNSQTGVDRNLISWKSADDPGPGQFSFGID 200

Query: 183 THGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEV--YYECDAK 240
             GFPQLV+R G++   R GSWNG  FTGTP L  +  L  Y F++N+      YE    
Sbjct: 201 RQGFPQLVIRNGTLKHCRLGSWNGKRFTGTPDLPRDQFL-KYDFILNKTHADYSYEILRP 259

Query: 241 GPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARC-TTNSSRRCD 299
           G  ++RL VNQSG V R +   Q + W   Y AP D CD YSVCGA+  C   + S  C 
Sbjct: 260 GALLTRLIVNQSGFVERFMRPIQNNNWTSIYSAPRDLCDNYSVCGAHMICKMVDQSHNCT 319

Query: 300 CLEGFVPKSPNNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELC 359
           CLEGF PKS  +WS GC R   L C +G  F  +  LKLPDTS SW++ SM+L EC ++C
Sbjct: 320 CLEGFEPKSHTDWSRGCARRSALNCTHG-IFQNFTGLKLPDTSLSWYDTSMSLVECKDMC 378

Query: 360 SKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSVTKKQVGI 419
            KNCSCTAYANS++    SGC+LWFG+L+DM+E++ GGQDLYIR+       +T      
Sbjct: 379 LKNCSCTAYANSNITGEASGCILWFGELVDMREFSTGGQDLYIRMPPPLKTGLT------ 432

Query: 420 IIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYN 479
                           F IWRKK +KQ       ++EDMEL  F  A+I KATDNF+S N
Sbjct: 433 ----------------FYIWRKKQRKQ------EIEEDMELPSFHLATIVKATDNFSSNN 470

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+GGFGPVYKGTL++GQEIAVKRLSK S QG+ EFKNEV LIA+LQHRNLVKLLGCCI
Sbjct: 471 KLGQGGFGPVYKGTLIDGQEIAVKRLSKSSRQGLTEFKNEVILIAKLQHRNLVKLLGCCI 530

Query: 540 QADESMLIYEYMPNKSLDFFIFD------IDW 565
           Q DE MLIYE+MPNKSLD+FIFD      +DW
Sbjct: 531 QGDEVMLIYEFMPNKSLDYFIFDQTRNKFLDW 562

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575982|ref|XP_002528887.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223531686|gb|EEF33511.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 303/584 (51%), Positives = 405/584 (69%), Gaps = 27/584 (4%)

Query: 2   LGAYSCLLFILGAS-AANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYK 60
           +G++     +L  + +A D I+P+Q + DG +LVS NG +ELGF S     +RYLG+WY+
Sbjct: 8   IGSFRFFFILLAITCSALDTISPNQPLSDGGSLVSANGNYELGFLSLTDPRRRYLGLWYR 67

Query: 61  RVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMD 119
           ++SPRT+ WVANRET L++ +  LN+TS+G +VLL+  + + W SNTS   KNPV QL+D
Sbjct: 68  KISPRTIVWVANRETSLSNTTATLNITSQGNLVLLNSTNDLVWLSNTSRIAKNPVAQLLD 127

Query: 120 SGNLVLTDGN-YNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFS 178
           +GN+V+ + N   + LWQSFDHP DT+LPGMK+G N  TG +   SSWKSI+DPA G+FS
Sbjct: 128 TGNIVIREANDSKNYLWQSFDHPGDTVLPGMKVGINLVTGHETFQSSWKSIDDPALGQFS 187

Query: 179 LWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECD 238
             +DT G+PQL+L+K   + YRAGSWNGL  TGTP L+ + P+  Y+F IN  E+Y++ D
Sbjct: 188 FHLDTRGYPQLLLKKEDRVVYRAGSWNGLRLTGTPILRLD-PVFTYEFEINAKEIYFKFD 246

Query: 239 AKGPAV-SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRR 297
               ++ SR  ++ +GLV R  W  +   W     A  D+C+ Y+ CGANA C  N+S  
Sbjct: 247 VLNLSIFSRYALSPTGLVQRLSWDDRAQDWVTIATAQTDQCENYAFCGANASCEINNSPI 306

Query: 298 CDCLEGFVPKSPNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNL 352
           C CL+GF PK+P +W     S+GCVR   L C + D F K   +KLPDTSSSW++ +++L
Sbjct: 307 CVCLDGFTPKTPTDWNMQVWSDGCVRRTPLDC-SKDGFVKRTGVKLPDTSSSWYDKTIDL 365

Query: 353 KECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRSV 412
           KEC  LC +NCSC+AY+N D+  GGSGCL+WF DL+D++    GG+DL+IR+AS      
Sbjct: 366 KECERLCLRNCSCSAYSNLDIRNGGSGCLIWFNDLIDIRGVPAGGEDLHIRVASSELPKT 425

Query: 413 TKKQ-------VGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHM--------KED 457
            KK+        G+I  + +++ + ++   F +WR+  +KQG+T+ SH+        KE 
Sbjct: 426 KKKEGSFGKVKAGLIAGTAVIVIISMIVG-FYMWRRNFRKQGITEGSHIQEYESKDAKEG 484

Query: 458 MELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFK 517
           MEL  FD ++I KATD+FASYNKLGEGGFG VYKGTL +GQEIAVKRLS+ SGQG  EFK
Sbjct: 485 MELPVFDLSTIIKATDDFASYNKLGEGGFGIVYKGTLADGQEIAVKRLSESSGQGSTEFK 544

Query: 518 NEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIF 561
           NEV LI+ LQHRNLVKLLGCCIQ DE MLIYEYMPNKSLDFFIF
Sbjct: 545 NEVILISELQHRNLVKLLGCCIQNDEKMLIYEYMPNKSLDFFIF 588

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493715|ref|XP_002280938.2| PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 317/602 (52%), Positives = 408/602 (67%), Gaps = 34/602 (5%)

Query: 2   LGAYSCLLFILGA---SAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIW 58
           +GA   LL +      S A D I  +Q +RDGE L S  G+FELGFFSP  S +RYLGIW
Sbjct: 1   MGALPTLLLVFSIFRISIAVDTIALNQVVRDGEILTSAGGSFELGFFSPDDSNRRYLGIW 60

Query: 59  YKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRD-RIFWSSNTSITMKNPVVQ 116
           YK+VS  TV WVANRE PL D SG+L VT +G + +L+G +  I WSSN+S + +NP  Q
Sbjct: 61  YKKVSTMTVVWVANREIPLNDSSGVLKVTDQGTLAILNGSNTNILWSSNSSRSARNPTAQ 120

Query: 117 LMDSGNLVLTDGNYNS---LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPA 173
           L+DSGNLV+ DGN ++    LWQSFD+PC+TLLPGMKLGRN  TG+DR+LS+WKS++DP+
Sbjct: 121 LLDSGNLVMKDGNDDNPENFLWQSFDYPCNTLLPGMKLGRNTVTGLDRYLSAWKSVDDPS 180

Query: 174 PGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEV 233
            G F+  +D  G+PQL+LRKGS + +R+G WNGL F+G P L  N P+  Y+FV NE E+
Sbjct: 181 KGNFTYRLDPSGYPQLILRKGSAVTFRSGPWNGLRFSGFPELGSN-PVYTYEFVFNEKEM 239

Query: 234 YYECD-AKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTT 292
           Y+  +      VSRL +N  G   R  W  +   W L   AP+D CD Y++CG    C  
Sbjct: 240 YFRYELVNSSVVSRLVLNPDGSKQRVNWIDRTHGWILYSSAPMDSCDSYALCGVYGSCNI 299

Query: 293 NSSRRCDCLEGFVPKSPNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFN 347
           N S +C+C+EGFVPK PN+W     S GCVR   L C+NG+ F K+  +KLPDT +SWFN
Sbjct: 300 NRSPKCECMEGFVPKFPNDWDMADWSNGCVRSTPLGCQNGEGFVKFSGVKLPDTRNSWFN 359

Query: 348 ASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASE 407
            SM+LKEC+ +C  NCSCTAY N D+  GGSGCLLWFGDL+D++E+N+ GQ+LY+R+A+ 
Sbjct: 360 RSMDLKECAAVCLSNCSCTAYTNLDIRDGGSGCLLWFGDLIDIREFNENGQELYVRMAAS 419

Query: 408 R-------GRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLK------KQGLTKMSHM 454
                   G    KK+  +I+ SV  + + ++  L  ++  K K        G       
Sbjct: 420 ELGMHRRSGNFKGKKREWVIVGSVSSLGIILLCLLLTLYLLKKKKLRKKGTMGYNLEGGQ 479

Query: 455 KEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME 514
           KED+EL  FDFA+++KAT++F+ +NKLGEGGFG VYKGTL E QEIAVKRLSK SGQG+ 
Sbjct: 480 KEDVELPLFDFATVSKATNHFSIHNKLGEGGFGLVYKGTLQEEQEIAVKRLSKNSGQGLN 539

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDWNGL 568
           EFKNEV  I++LQHRNLV+LLG CI  +E MLIYEYMPNKSLD FIFD      +DWN  
Sbjct: 540 EFKNEVIYISKLQHRNLVRLLGGCIHDEEKMLIYEYMPNKSLDSFIFDKTRSMELDWNKR 599

Query: 569 ML 570
            L
Sbjct: 600 FL 601

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115102|ref|XP_002316940.1| predicted protein [Populus trichocarpa] gi|222860005|gb|EEE97552.1| predicted protein [Populus trichocarpa]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 317/581 (54%), Positives = 390/581 (67%), Gaps = 49/581 (8%)

Query: 2   LGAYSCLLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKR 61
           L  YS LL  +  S A D I+P Q I DG+T+VS    FELGFFSPG+S +RYLGIWYK+
Sbjct: 15  LFVYSFLLSTIRVSNAPDIISPGQFIGDGDTIVSAGQNFELGFFSPGSSTRRYLGIWYKK 74

Query: 62  VSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDS 120
            S  TV WVANRE P+ D SG+L  T++G ++LL+G   + WSSN +    NPV QL++S
Sbjct: 75  FSTGTVVWVANRENPIFDHSGVLYFTNQGTLLLLNGTKDVVWSSNRTTPKNNPVAQLLES 134

Query: 121 GNLVLTDGNYN---SLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEF 177
           GNLV+ DGN +   S LWQSFD+P DT LP MKLGRN  TG+D  +SSWKS++DPA GE+
Sbjct: 135 GNLVVKDGNDSNPESFLWQSFDYPGDTNLPDMKLGRNLVTGLDWSISSWKSLDDPARGEY 194

Query: 178 SLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYEC 237
           SL ID  G+ QLV +KG  +Q+RAGSWNG+ FTG   L+ N P+  Y+FV+N+ EVY+  
Sbjct: 195 SLGIDPRGYQQLVYKKGRAIQFRAGSWNGIRFTGATRLRPN-PVYRYEFVLNDKEVYFNF 253

Query: 238 DAKGPAV-SRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSR 296
           +    +V SR  VN SG+V R  W SQ   W   +    D+CD YS CG+NA+C  + S 
Sbjct: 254 ELLNSSVASRFVVNASGVVERLTWISQMHRWTRYFAVGEDQCDAYSFCGSNAKCNIDKSP 313

Query: 297 RCDCLEGFVPKSP-----NNWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMN 351
            C CL+GF PKS       +WS GCVR   L C  G+ F K+  +KLPDTSSSW+N S++
Sbjct: 314 VCACLDGFEPKSARDWSFQDWSGGCVRRTTLTCNRGEGFVKHTGMKLPDTSSSWYNTSIS 373

Query: 352 LKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIASERGRS 411
           LKEC ELC K CSC AYAN+DV  GGSGCLLWFGDL+DM+E+ + GQDLYIR+A+    S
Sbjct: 374 LKECQELCLKKCSCMAYANTDVRGGGSGCLLWFGDLIDMREFVNTGQDLYIRMAA----S 429

Query: 412 VTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSH-MKEDMELWEFDFASIAK 470
              K   I+                           +   SH  KE++EL   D ++IAK
Sbjct: 430 YLGKMKNIL--------------------------EMDYDSHSRKEELELPIIDLSTIAK 463

Query: 471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
           AT NF+S  KLGEGGFG VYKGTL  GQ+IAVKRLS  SGQG+EEFKNEV LIA+LQHRN
Sbjct: 464 ATGNFSSNKKLGEGGFGLVYKGTLY-GQDIAVKRLSMYSGQGIEEFKNEVLLIAKLQHRN 522

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDW 565
           LVKLLGCCI+ DE MLIYEYMPNKSLD+FIFD      +DW
Sbjct: 523 LVKLLGCCIEGDERMLIYEYMPNKSLDYFIFDQSRSKLLDW 563

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	579
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.671	0.496	0.475	6.1e-144
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.749	0.510	0.416	2e-130
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.886	0.629	0.496	7.3e-130
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.746	0.512	0.409	2.4e-125
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.803	0.548	0.382	1.7e-120
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.739	0.504	0.398	2.1e-113
TAIR|locus:2197744	807	AT1G61420 [Arabidopsis thalian	0.946	0.679	0.405	3.1e-106
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.761	0.531	0.354	8.2e-106
TAIR|locus:2200923	802	AT1G61550 [Arabidopsis thalian	0.944	0.682	0.417	1.1e-105
TAIR|locus:2197664	804	AT1G61490 [Arabidopsis thalian	0.948	0.682	0.396	7.5e-105

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 1048 (374.0 bits), Expect = 6.1e-144, Sum P(2) = 6.1e-144
 Identities = 192/404 (47%), Positives = 277/404 (68%)

Query:    17 ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETP 76
             A D +  +Q+++DG+T+VS  G+FE+GFFSPG S  RYLGIWYK++S +TV WVANR++P
Sbjct:    23 ATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYKKISLQTVVWVANRDSP 82

Query:    77 LTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTS-----ITMKNPVVQLMDSGNLVLTD-GN 129
             L D SG L V+  G + L + R+ I WSS++S      +++NP+VQ++D+GNLV+ + G+
Sbjct:    83 LYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPIVQILDTGNLVVRNSGD 142

Query:   130 YNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQL 189
                 +WQS D+P D  LPGMK G NF TG++R L+SW++I+DP+ G ++  +D +G PQ 
Sbjct:   143 DQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDDPSTGNYTNKMDPNGVPQF 202

Query:   190 VLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGPAV-SRLW 248
              L+K SV+ +R G WNGL FTG P LK N P+  Y++V  E EVYY    + P+V +R+ 
Sbjct:   203 FLKKNSVVVFRTGPWNGLRFTGMPNLKPN-PIYRYEYVFTEEEVYYTYKLENPSVLTRMQ 261

Query:   249 VNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKS 308
             +N +G + R  W      W     A +D CD Y++CG+   C  N S  C CL+GFV K+
Sbjct:   262 LNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSCNINESPACRCLKGFVAKT 321

Query:   309 PN-----NWSEGCVRERELKCRNGDE-FPKYVKLKLPDTSSSWFNASMNLKECSELCSKN 362
             P      +WSEGCVR  +L C  G++ F K  KLKLPDT +SW++ +M+L EC ++C +N
Sbjct:   322 PQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTSWYDKNMDLNECKKVCLRN 381

Query:   363 CSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS 406
             C+C+AY+  D+  GG GC+LWFGDL+D++EYN+ GQDLY+R+AS
Sbjct:   382 CTCSAYSPFDIRDGGKGCILWFGDLIDIREYNENGQDLYVRLAS 425

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 946 (338.1 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
 Identities = 189/454 (41%), Positives = 280/454 (61%)

Query:     8 LLFILGASAAND-NITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRT 66
             +LF   + +AN  + + S +I    T+VS    FELGFF PG  ++ YLGIWYK +S RT
Sbjct:    20 ILFPAYSISANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRT 79

Query:    67 VAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSN-TSITMKNPVV-QLMDSGNLV 124
               WVANR+TPL+   G L ++   +V+LD  D   WS+N T   +++P+V +L+D+GN V
Sbjct:    80 YVWVANRDTPLSSSIGTLKISDSNLVVLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFV 139

Query:   125 LTDGNYNS---LLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWI 181
             L D   ++   +LWQSFD P DTLLP MKLG + KTG +R + SWKS +DP+ G+FS  +
Sbjct:   140 LRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKL 199

Query:   182 DTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECD-AK 240
             +T GFP++ L       YR+G WNG+ F+G P ++    +  + F  ++ EV Y     K
Sbjct:   200 ETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMV-FNFTTSKEEVTYSFRITK 258

Query:   241 GPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDC 300
                 SRL ++ SGL+ R  W      W   +YAP D+CD Y  CG    C +N+S  C+C
Sbjct:   259 SDVYSRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNC 318

Query:   301 LEGFVPKSPNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKEC 355
             ++GF P++P  W     S+GCVR+  L C  GD F +  K+KLPDT+++  +  + +KEC
Sbjct:   319 IKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGIGVKEC 378

Query:   356 SELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS---ERGRSV 412
              + C ++C+CTA+AN+D+   GSGC+ W G+L D++ Y  GGQDLY+R+A+   E  R+ 
Sbjct:   379 EQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVRLAATDLEDKRNR 438

Query:   413 TKKQVGIIIA-SVLLMAMFIVASLFCIWRKKLKK 445
             + K +G  I  SVLL+  FI+   F +W++K K+
Sbjct:   439 SAKIIGSSIGVSVLLLLSFII---FFLWKRKQKR 469

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
 Identities = 269/542 (49%), Positives = 347/542 (64%)

Query:    53 RYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITM-- 110
             R+LG+WY            N     T     L+     + L DG  +  WSS++S T   
Sbjct:    63 RFLGLWYMEPFAVVWVANRNNPLYGTSGFLNLSSLGD-LQLFDGEHKALWSSSSSSTKAS 121

Query:   111 ---KNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWK 167
                 NP++++  SGNL+ +DG   ++LWQSFD+P +T+L GMKLG+NFKT M+  LSSWK
Sbjct:   122 KTANNPLLKISCSGNLISSDGE-EAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWK 180

Query:   168 SINDPAPGEFSLWIDTHGFPQLVLRKG--SVLQYRAGSWNGLGFTGTPPLKENVPLCDYK 225
             ++ DP+PG+F+L +DT G PQL+LRK   S   YR GSWNGL FTG P +     L DYK
Sbjct:   181 TLKDPSPGDFTLSLDTRGLPQLILRKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYK 240

Query:   226 FVINENEVYYECDAKGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCG 285
             F  +  EV Y    +   VSRL +N +G + R I  S+Q+ W LA  AP D CD YS+CG
Sbjct:   241 FTSSAQEVNYSWTPRHRIVSRLVLNNTGKLHRFI-QSKQNQWILANTAPEDECDYYSICG 299

Query:   286 ANARCTTNSSRR--CDCLEGFVPKSPNNWS-----EGCVRERELKCRNGDEFPKYVKLKL 338
             A A C  NS     C CL+GF PKS   W+      GCV E    C   D F K+  LKL
Sbjct:   300 AYAVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKL 359

Query:   339 PDTSSSWFNAS--MNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDG 396
             PDTS SW++A   M L++C   CS NCSCTAYAN+D+  GG GCLLWFGDL+DM+EY+  
Sbjct:   360 PDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYSSF 419

Query:   397 GQDLYIRIASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQ--GLT-KMSH 453
             GQD+YIR+   +     ++ VG+++ SV+ +A+ +V  +F  +RKK+ K+  G   +   
Sbjct:   420 GQDVYIRMGFAKIEFKGREVVGMVVGSVVAIAVVLVV-VFACFRKKIMKRYRGENFRKGI 478

Query:   454 MKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGM 513
              +ED++L  FD  +I+ ATD+F+  N LG GGFGPVYKG L +GQEIAVKRLS  SGQG+
Sbjct:   479 EEEDLDLPIFDRKTISIATDDFSYVNFLGRGGFGPVYKGKLEDGQEIAVKRLSANSGQGV 538

Query:   514 EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDWNG 567
             EEFKNEV LIA+LQHRNLV+LLGCCIQ +E MLIYEYMPNKSLDFFIFD      +DW  
Sbjct:   539 EEFKNEVKLIAKLQHRNLVRLLGCCIQGEECMLIYEYMPNKSLDFFIFDERRSTELDWKK 598

Query:   568 LM 569
              M
Sbjct:   599 RM 600

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 907 (324.3 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
 Identities = 185/452 (40%), Positives = 275/452 (60%)

Query:     8 LLFILGASAAND-NITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRT 66
             +LF+  + + N  + T S +I   +T++S +  FELGFF+P +S++ YLGIWYK +  RT
Sbjct:    18 ILFLAFSVSPNTLSATESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIPIRT 77

Query:    67 VAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSN-TSITMKNPVV-QLMDSGNLV 124
               WVANR+ PL+  +G L ++   +V+ D  DR  WS+N T   +++PV  +L+D+GN +
Sbjct:    78 YVWVANRDNPLSSSNGTLKISGNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDNGNFL 137

Query:   125 LTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTH 184
             L D N N LLWQSFD P DTLL  MKLG + KTG +R L SWK+ +DP+ GEFS  ++T 
Sbjct:   138 LRDSN-NRLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETS 196

Query:   185 GFPQL-VLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDA-KGP 242
              FP+  +  K S+L YR+G WNG+ F+  P   + V    Y F  ++ EV Y     K  
Sbjct:   197 EFPEFYICSKESIL-YRSGPWNGMRFSSVPGTIQ-VDYMVYNFTASKEEVTYSYRINKTN 254

Query:   243 AVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLE 302
               SRL++N +GL+ R  W      W   +Y+P D CD Y VCG    C +NS   C C++
Sbjct:   255 LYSRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIK 314

Query:   303 GFVPKSPNNW-----SEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSE 357
             GF P +   W     S GC+R+  L C   D F +  ++KLPDT+++  +  + LK C E
Sbjct:   315 GFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKE 374

Query:   358 LCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS---ERGRSVTK 414
              C ++C+CTA+AN+D+  GGSGC++W  +++DM+ Y  GGQDLY+R+A+   E  R   +
Sbjct:   375 RCLEDCNCTAFANADIRNGGSGCVIWTREILDMRNYAKGGQDLYVRLAAAELEDKRIKNE 434

Query:   415 KQVGIIIA-SVLLMAMFIVASLFCIWRKKLKK 445
             K +G  I  S+LL+  F++   F  W++K K+
Sbjct:   435 KIIGSSIGVSILLLLSFVI---FHFWKRKQKR 463

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 871 (311.7 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
 Identities = 186/486 (38%), Positives = 280/486 (57%)

Query:     8 LLFI-LGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRT 66
             +LF+     A+N + T S +I   +T++S +  FELGFF+P +S++ YLGIWYK +  RT
Sbjct:    18 ILFLAFSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRT 77

Query:    67 VAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSN-TSITMKNPVV-QLMDSGNLV 124
               WVANR+ PL+  +G L ++   +V+ D  DR  WS+N T   +++PV  +L+D GN V
Sbjct:    78 YVWVANRDNPLSSSNGTLKISDNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFV 137

Query:   125 LTDGNYNS---LLWQSFDHPCDTLLPGMKLGRNFKTG-MDRHLSSWKSINDPAPGEFSLW 180
             L D   N     LWQSFD P DTLL  MK+G + K+G  +R L SWK+ +DP+ G+FS  
Sbjct:   138 LRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTK 197

Query:   181 IDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDA- 239
             + T GFP+  +     + YR+G W G  F+  P +K  V   D  F  N  +V Y     
Sbjct:   198 LRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKP-VDYIDNSFTENNQQVVYSYRVN 256

Query:   240 KGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCD 299
             K    S L ++ +GL+ R  W      W   +Y+P D CD Y  CG    C  N+S  C+
Sbjct:   257 KTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICN 316

Query:   300 CLEGFVPKSPN----NWSEGCVRERELKCRNGDEFPKYVKLKLPDTSSSWFNASMNLKEC 355
             C++GF P +      + S GCVR+ +L C   D F +  K++LPDT+ +  +  + LKEC
Sbjct:   317 CIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKEC 376

Query:   356 SELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS---ERGRSV 412
              E C K C+CTA+AN+D+  GGSGC++W G L D++ Y  GGQDLY+R+A+   E  R  
Sbjct:   377 EERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRIK 436

Query:   413 TKKQVGIIIA-SVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKA 471
             +KK +G  I  S+LL+  FI+   F  W++K +K+ +T  + + + +   +     + KA
Sbjct:   437 SKKIIGSSIGVSILLLLSFII---FHFWKRK-QKRSITIQTPIVDLVRSQDSLMNELVKA 492

Query:   472 TDNFAS 477
             + ++ S
Sbjct:   493 SRSYTS 498

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 757 (271.5 bits), Expect = 2.1e-113, Sum P(2) = 2.1e-113
 Identities = 182/457 (39%), Positives = 258/457 (56%)

Query:    10 FILGASAANDNITPSQSIRDG---ETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRT 66
             F+  +S A + I   +S+RDG   + LVS   TFELGFFSPG+S  R+LGIWY  +  + 
Sbjct:    18 FLYESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIWYGNIEDKA 77

Query:    67 VAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSN--TSITMKNP-VVQLMDSGN 122
             V WVANR TP++DQSG+L +++ G +VLLDG++   WSSN  +S T  N  VV + D+GN
Sbjct:    78 VVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRVVSIHDTGN 137

Query:   123 LVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWID 182
              VL++ + +  +W+SF+HP DT LP M++  N +TG +    SW+S  DP+PG +SL +D
Sbjct:   138 FVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGVD 197

Query:   183 THGFPQLVLRKGS-VLQYRAGSWNGLGFTGTP--PLKENVPLCDYKFVINENE---VYYE 236
               G P++VL +G+   ++R+G WN   FTG P   L  N  L  +K     +E   VY+ 
Sbjct:   198 PSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNY-LYGFKLSSPPDETGSVYFT 256

Query:   237 CDAKGPAVS-RLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSS 295
                  P+V  R  V  +G      W+     W      P   CD Y+ CG    C    S
Sbjct:   257 YVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGS 316

Query:   296 RR-CDCLEGFVPKSPNNWSEGCVRERELKC-RN---G-DEFPKYVKLKLPDTSSSWFNAS 349
                C C+ G+   S  NWS GC R   LKC RN   G DEF     +KLPD      N  
Sbjct:   317 NGICSCIHGYEQVSVGNWSRGCRRRTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNL- 375

Query:   350 MNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIA-SER 408
             ++ ++C E C +NCSC AY  S V  GG GC++W  DL+D++++  GG  L+IR+A SE 
Sbjct:   376 VDPEDCRERCLRNCSCNAY--SLV--GGIGCMIWNQDLVDLQQFEAGGSSLHIRLADSEV 431

Query:   409 GRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKK 445
             G +  K ++ +I+A VL+  + I      +WR K KK
Sbjct:   432 GEN-RKTKIAVIVA-VLVGVILIGIFALLLWRFKRKK 466

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 241/595 (40%), Positives = 336/595 (56%)

Query:     4 AYSCLL-FILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRV 62
             AY  L  F + +S+A   IT    +  G+TL S NG +ELGFF+   S  +Y+GIW+K +
Sbjct:    10 AYLLLSSFFISSSSAG--ITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGI 67

Query:    63 SPRTVAWVANRETPLTDQSGLLNVTSKGIVLL-DGRDRIFWSSNTSITMKNPVVQLMDSG 121
              PR V WVANRE P+TD +  L +++ G +LL +G+  + WSS  ++       +L D+G
Sbjct:    68 IPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSGEALVSNGSRAELSDTG 127

Query:   122 NLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWI 181
             NL++ D      LWQSFDH  DT+LP   L  N  TG  + LSSWKS  DP+ G+F L I
Sbjct:   128 NLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQI 187

Query:   182 DTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENV--PLCDYKFVINENEVYYECDA 239
                   Q+++ KGS   YR+G W    FTG P + +    P+   +       + Y    
Sbjct:   188 TPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYL--N 245

Query:   240 KGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCD 299
             +   + R  +   G    S W +  D W L + AP   CD Y VCG    C  +   +C 
Sbjct:   246 RNDRLQRTMLTSKGTQELS-WHNGTD-WVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCT 303

Query:   300 CLEGFVPK-----SPNNWSEGCVRERELKCRNGDEFPKYV-------KLKLPDTSSSWFN 347
             C +GFVPK        NW+ GCVR  EL C+ G+   KY        ++K PD     F 
Sbjct:   304 CFKGFVPKLIEEWKRGNWTGGCVRRTELYCQ-GNSTGKYANVFHPVARIKPPDFYE--FA 360

Query:   348 ASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIA-S 406
             + +N++EC + C  NCSC A+A  D    G GCL+W  DLMD  ++++GG+ L IR+A S
Sbjct:   361 SFVNVEECQKSCLHNCSCLAFAYID----GIGCLMWNQDLMDAVQFSEGGELLSIRLARS 416

Query:   407 ERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQG--LTKMSHM--KEDMELWE 462
             E G +  KK +   I S+ L+ +    + FC WR ++K      T  S +  + D++  +
Sbjct:   417 ELGGNKRKKAITASIVSLSLVVIIAFVA-FCFWRYRVKHNADITTDASQVSWRNDLKPQD 475

Query:   463 ------FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEF 516
                   FD  +I  AT+NF+  NKLG+GGFGPVYKG L +G+EIAVKRLS  SGQG EEF
Sbjct:   476 VPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEF 535

Query:   517 KNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDW 565
              NE+ LI++LQH+NLV++LGCCI+ +E +LIYE+M N SLD F+FD      IDW
Sbjct:   536 MNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDW 590

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 728 (261.3 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
 Identities = 169/477 (35%), Positives = 252/477 (52%)

Query:     8 LLFILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTV 67
             + F L    A D IT S   RD ET+VS + TF  GFFSP  S  RY GIW+  +  +TV
Sbjct:    12 ICFSLRLCLATDVITFSSEFRDSETVVSNHSTFRFGFFSPVNSTGRYAGIWFNNIPVQTV 71

Query:    68 AWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMK-NPV-VQLMDSGNLV 124
              WVAN  +P+ D SG+++++ +G +V++DGR ++ WS+N  + +  N    +L+++GNLV
Sbjct:    72 VWVANSNSPINDSSGMVSISKEGNLVVMDGRGQVHWSTNVLVPVAANTFYARLLNTGNLV 131

Query:   125 L--TDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWID 182
             L  T    + +LW+SF+HP +  LP M L  + KTG    L SWKS  DP+PG +S  + 
Sbjct:   132 LLGTTNTGDEILWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFDPSPGRYSAGLI 191

Query:   183 THGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGP 242
                FP+LV+ K  +L +R+G WNG  F G P +   + L +     +         A   
Sbjct:   192 PLPFPELVVWKDDLLMWRSGPWNGQYFIGLPNMDYRINLFELTLSSDNRGSVSMSYAGNT 251

Query:   243 AVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTN--SSRRCDC 300
              +    ++  G V +  W+     W      P  +CD Y+ CG  A C  N  S+  C C
Sbjct:   252 LLYHFLLDSEGSVFQRDWNVAIQEWKTWLKVPSTKCDTYATCGQFASCRFNPGSTPPCMC 311

Query:   301 LEGFVPKS-----PNNWSEGCVRERELKC---------RNGDEFPKYVKLKLPDTSSSWF 346
             + GF P+S       NW++GCVR+  L+C         R  D F +  K+K+P       
Sbjct:   312 IRGFKPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVRVQKMKVPHNPQ--- 368

Query:   347 NASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS 406
              +  N ++C E C KNCSCTAY+    +RG  GCLLW G+LMDM+E++  G   YIR+A 
Sbjct:   369 RSGANEQDCPESCLKNCSCTAYS---FDRG-IGCLLWSGNLMDMQEFSGTGVVFYIRLAD 424

Query:   407 ERGRSVTKKQVGIIIASVLLMAMFIVAS--LFCIWR--KKLKKQGLTKMSHMKEDME 459
                +  T +   I+I   LL+  F+ A   +  +W+  K  +K   T++  + E ME
Sbjct:   425 SEFKKRTNRS--IVITVTLLVGAFLFAGTVVLALWKIAKHREKNRNTRL--LNERME 477

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)]

 Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
 Identities = 249/596 (41%), Positives = 342/596 (57%)

Query:     5 YSCLLF-ILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVS 63
             ++C LF  L  S +   ITP+  +  G+TL S NG FELGFFSP  S   Y+GIW+K + 
Sbjct:     4 FACFLFSTLLLSFSYAAITPTSPLSIGQTLSSPNGIFELGFFSPNNSRNLYVGIWFKGII 63

Query:    64 PRTVAWVANRETPLTDQSGLLNVTSKGIVLL-DGRDRIFWSSNTSITMKNPVVQLMDSGN 122
             PRTV WVANRE  +TD +  L ++S G +LL DG+    WS+  +        +L DSGN
Sbjct:    64 PRTVVWVANRENSVTDATADLAISSNGSLLLFDGKHSTVWSTGETFASNGSSAELSDSGN 123

Query:   123 LVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWID 182
             L++ D      LWQSF+H  DT+LP   L  N  TG  R LSSWKS  DP PGEF  +I 
Sbjct:   124 LLVIDKVSGITLWQSFEHLGDTMLPYSSLMYNPGTGEKRVLSSWKSYTDPLPGEFVGYIT 183

Query:   183 THGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINEN---EVYYECDA 239
             T   PQ  + +GS   +R+G W    FTG P   E+     + F + ++    VY+    
Sbjct:   184 TQVPPQGFIMRGSKPYWRSGPWAKTRFTGVPLTDESYT---HPFSVQQDANGSVYFSHLQ 240

Query:   240 KGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCD 299
             +    S L +   G  L+    +  D W L    P + CD Y VCG    C  +   +C 
Sbjct:   241 RNFKRSLLVLTSEGS-LKVTHHNGTD-WVLNIDVPANTCDFYGVCGPFGLCVMSIPPKCK 298

Query:   300 CLEGFVPK-----SPNNWSEGCVRERELKC------RNGDEFPKYVKLKLPDTSSSWFNA 348
             C +GFVP+        NW+ GCVR  EL C      R+ + F     +K PD     F +
Sbjct:   299 CFKGFVPQFSEEWKRGNWTGGCVRRTELLCQGNSTGRHVNVFHPVANIKPPDFYE--FVS 356

Query:   349 SMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIAS-E 407
             S + +EC + C  NCSC A+A  +    G GCL+W  +LMD+ +++ GG+ L IR+AS E
Sbjct:   357 SGSAEECYQSCLHNCSCLAFAYIN----GIGCLIWNQELMDVMQFSVGGELLSIRLASSE 412

Query:   408 RGRSVTKKQVGIIIASVLLMAMFIV--ASLFCIWRKKLKKQGL-TKMS-------HMK-E 456
              G +  KK    IIAS++ +++F+   ++ F  WR +LK   + +K+S        +K E
Sbjct:   413 MGGNQRKKT---IIASIVSISLFVTLASAAFGFWRYRLKHNAIVSKVSLQGAWRNDLKSE 469

Query:   457 DME-LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEE 515
             D+  L+ F+  +I  AT+NF+  NKLG+GGFGPVYKG L +G+EIAVKRLS  SGQG EE
Sbjct:   470 DVSGLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEE 529

Query:   516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDW 565
             F NE+ LI++LQH NLV++LGCCI+ +E +L+YE+M NKSLD FIFD      IDW
Sbjct:   530 FMNEILLISKLQHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFDSRKRVEIDW 585

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]

 Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
 Identities = 234/590 (39%), Positives = 336/590 (56%)

Query:     5 YSCLL-FILGASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVS 63
             ++CLL F +    +   IT    +   +TL S NG +ELGFFSP  S   Y+GIW+K + 
Sbjct:     9 FACLLLFTVLLRFSYAGITTESPLSVEQTLSSSNGIYELGFFSPNNSQNLYVGIWFKGII 68

Query:    64 PRTVAWVANRETPLTDQSGLLNVTSKGIVLL-DGRDRIFWSSNTSITMKNPVVQLMDSGN 122
             PR V WVANRETP TD S  L ++S G +LL +G+  + WS   +        +L D+GN
Sbjct:    69 PRVVVWVANRETPTTDTSANLAISSNGSLLLFNGKHGVVWSIGENFASNGSRAELTDNGN 128

Query:   123 LVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWID 182
             LV+ D      LW+SF+H  DT+LP   L  N  TG  R L+SWK+  DP+PG F   I 
Sbjct:   129 LVVIDNASGRTLWESFEHFGDTMLPFSSLMYNLATGEKRVLTSWKTDTDPSPGVFVGQIT 188

Query:   183 THGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINEN-EVYYECDAKG 241
                  Q+++ +GS   YR G W    FTG P L ++     +    + N   ++    + 
Sbjct:   189 PQVPSQVLIMRGSTRYYRTGPWAKTRFTGIP-LMDDTYASPFSLQQDANGSGFFTYFDRS 247

Query:   242 PAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCL 301
               +SR+ ++  G + R   +     W L+Y AP + CD+Y VCG    C  +   +C CL
Sbjct:   248 FKLSRIIISSEGSMKRFRHNGTD--WELSYMAPANSCDIYGVCGPFGLCIVSVPLKCKCL 305

Query:   302 EGFVPKSPN-----NWSEGCVRERELKCRN---GDE---FPKYVKLKLPDTSSSWFNASM 350
             +GFVP S       NW+ GC R  EL C+    G +   F     +KLPD     + +S+
Sbjct:   306 KGFVPHSTEEWKRGNWTGGCARLTELHCQGNSTGKDVNIFHPVTNVKLPDFYE--YESSV 363

Query:   351 NLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGGQDLYIRIA-SERG 409
             + +EC + C  NCSC A+A       G GCL+W  +LMD  +++ GG+ L IR+A SE G
Sbjct:   364 DAEECHQSCLHNCSCLAFAYIH----GIGCLIWNQNLMDAVQFSAGGEILSIRLAHSELG 419

Query:   410 RSVTKKQVGIIIASVLLMAMFIV--ASLFCIWRKKLKKQGLTKMSHMKEDMELWE----- 462
              +   K   II+AS + +++F++  ++ F  WR ++K +  T     + D++  E     
Sbjct:   420 GNKRNK---IIVASTVSLSLFVILTSAAFGFWRYRVKHKAYTLKDAWRNDLKSKEVPGLE 476

Query:   463 -FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVT 521
              F+  +I  AT+NF+  NKLG+GGFG VYKG L +G+EIAVK+LS  SGQG EEF NE+ 
Sbjct:   477 FFEMNTIQTATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKQLSSSSGQGKEEFMNEIV 536

Query:   522 LIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDW 565
             LI++LQHRNLV++LGCCI+ +E +LIYE+M NKSLD F+FD      +DW
Sbjct:   537 LISKLQHRNLVRVLGCCIEGEEKLLIYEFMLNKSLDTFVFDARKKLEVDW 586

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	579
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	4e-35
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	9e-31
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	1e-28
pfam08276	66	pfam08276, PAN_2, PAN-like domain	5e-26
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	1e-25
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	3e-23
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-20
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-20
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-18
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-18
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-14
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	8e-14
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-12
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-11
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-11
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-11
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	5e-11
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-11
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-10
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	8e-10
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-09
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-09
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-09
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-09
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-09
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-08
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-08
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	6e-08
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-08
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-07
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	4e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-07
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-07
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	5e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-07
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	6e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-07
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	8e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	9e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-06
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-06
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	4e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-06
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	9e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-05
cd00129	80	cd00129, PAN_APPLE, PAN/APPLE-like domain; present	2e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	7e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	5e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	5e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	8e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.001
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.001
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.001
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.001
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.001
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.001
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.002
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.002
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.003
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.003
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.003
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.003
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.004
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.004
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.004

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score =  127 bits (321), Expect = 4e-35
 Identities = 61/111 (54%), Positives = 69/111 (62%), Gaps = 3/111 (2%)

Query: 64  PRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGN 122
            +TV WVANR  PLTD S  L + S G +VL DG  R+ WSSNTS      V  L D GN
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60

Query: 123 LVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPA 173
           LVL D +   +LWQSFDHP DTLLPG K G N   G  R L+SWKS  DP+
Sbjct: 61  LVLYDNS-GKVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score =  115 bits (291), Expect = 9e-31
 Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 4/119 (3%)

Query: 24  SQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGL 83
           S  +  G+TLVS    FELGFF     ++ Y  I YK  S RTV WVANR+ P    S  
Sbjct: 1   SNPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYK-GSSRTVVWVANRDNPSGS-SCT 58

Query: 84  LNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHP 141
           L + S G +V+ DG   + WSSNT+    N V+ L+D GNLVL D + N  LWQSFD+P
Sbjct: 59  LTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNF-LWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score =  109 bits (275), Expect = 1e-28
 Identities = 57/118 (48%), Positives = 74/118 (62%), Gaps = 5/118 (4%)

Query: 24  SQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGL 83
           S ++  G+TLVS N  FELGFF+       Y  I YK  S RTV WVANR+ P++D S  
Sbjct: 1   SNTLSSGQTLVSGNSLFELGFFTLIMQN-DYNLILYK-SSSRTVVWVANRDNPVSD-SCT 57

Query: 84  LNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDH 140
           L + S G +VL DG  R+ WSSNT+    N V+ L+D GNLV+ D +  + LWQSFD+
Sbjct: 58  LTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYD-SDGNFLWQSFDY 114

Length = 114

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score =  100 bits (252), Expect = 5e-26
 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 324 CRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLW 383
           C  GD F +   +KLPDT+++  + S+ LKEC + C  NCSCTAYA +D+ RGGSGCL+W
Sbjct: 1   CGGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADI-RGGSGCLIW 59

Query: 384 FGDLMDM 390
            G+L+DM
Sbjct: 60  TGELVDM 66

Length = 66

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score =  101 bits (253), Expect = 1e-25
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 199 YRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYE-CDAKGPAVSRLWVNQSGLVLR 257
           +R+G WNG+ F+G P +++      Y F  N  EVYY          SRL ++  G + R
Sbjct: 1   WRSGPWNGIRFSGIPEMQKL-SYYVYNFTENNEEVYYTYRMTNNSIYSRLTLSSEGSLER 59

Query: 258 SIWSSQQDVWFLAYYAPLDRCDLYSVCGANARCTTNSSRRCDCLEGFVPKS 308
             W      W L + AP D+CD+Y  CG    C  N+S +C+C++GFVPK+
Sbjct: 60  FTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 93.7 bits (233), Expect = 3e-23
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 5/81 (6%)

Query: 325 RNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWF 384
            + D F K   +KLPD +S+    +++L+EC E C  NCSCTAYA ++   G  GCLLW 
Sbjct: 9   GSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWN 63

Query: 385 GDLMDMKEYNDGGQDLYIRIA 405
           G L +++  + GG  LY+R+A
Sbjct: 64  GLLNNLRSLSSGGGTLYLRLA 84

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 89.5 bits (223), Expect = 6e-20
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 480 KLGEGGFGPVYKGTLV-----EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVK 533
           KLGEG FG VYKG L      +  E+AVK L +  S Q +EEF  E  ++ +L H N+VK
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG C + +   ++ EYM    L  ++
Sbjct: 66  LLGVCTEEEPLYIVMEYMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 88.8 bits (221), Expect = 9e-20
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 6/87 (6%)

Query: 480 KLGEGGFGPVYKGTL-----VEGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVK 533
           KLGEG FG VYKGTL      +  E+AVK L +  S Q +EEF  E  ++ +L H N+VK
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG C + +  M++ EYMP   L  ++
Sbjct: 66  LLGVCTEEEPLMIVMEYMPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 479 NKLGEGGFGPVYKGTLVEGQ----EIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVK 533
            KLGEG FG VYKG L        E+AVK L +  S +  ++F  E  ++ +L H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG C + +   L+ EYM    L  ++
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 84.1 bits (209), Expect = 4e-18
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 6/87 (6%)

Query: 480 KLGEGGFGPVYKGTLVE-----GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVK 533
           KLGEG FG VYKGTL         ++AVK L +G+  +  EEF  E +++ +L H N+V+
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG C Q +   ++ EYMP   L  F+
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFL 92

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           LGEGGFG VY     + G+++A+K + K  S   +EE   E+ ++ +L H N+VKL G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 539 IQADESMLIYEYMPNKSLDFFI 560
              +   L+ EY    SL   +
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLL 82

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 72.2 bits (178), Expect = 4e-14
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKLL 535
             LG G FG VY     + G+ +AVK   LS  S + +E  + E+ +++ LQH N+V+  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 536 GCCIQADESML-IY-EYMPNKSL 556
           G     +++ L I+ EY+   SL
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSL 88

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 71.7 bits (176), Expect = 8e-14
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 481 LGEGGFGPVYKGT---LVEGQE---IAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVK 533
           LGEG FG V+ G    L    +   +AVK L + +     + F+ E  L+   QH N+VK
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
             G C + D  ++++EYM +  L+ F+
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 481 LGEGGFGPVYKGTLV------EGQEIAVKRLSK-GSGQGMEEFKNEVTLIARLQHRNLVK 533
           LGEG FG VYKG L           +A+K L +    +  +EF+ E  L++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG C +   + +++EY+ +  L  F+
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 68.3 bits (168), Expect = 7e-13
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)

Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVKLLG 536
            KLGEG FG VY     + G+ +A+K + K   +   E    E+ ++ +L+H N+V+L  
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 537 CCIQADESMLIYEYMPNKSLDFFI 560
                D+  L+ EY     L   +
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLL 88

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 66.1 bits (162), Expect = 5e-12
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 480 KLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFK---NEVTLIARLQHRNLVKLL 535
           KLG G FG VYK      G+ +AVK L K   +  ++ +    E+ ++ RL H N+V+L+
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKK-RSEKSKKDQTARREIRILRRLSHPNIVRLI 64

Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
                 D   L+ EY     L  ++
Sbjct: 65  DAFEDKDHLYLVMEYCEGGDLFDYL 89

Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 479 NKLGEGGFGPVYKG-TLVEGQEIAVKRLS--KGSGQGMEEFKNEVTLIARLQHRNLVKLL 535
           + +G G FG VYKG  L  G  +A+K++S  K   + ++    E+ L+  L+H N+VK +
Sbjct: 6   DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65

Query: 536 GCCIQADESMLIYEYMPNKSL 556
           G    +D   +I EY  N SL
Sbjct: 66  GSIETSDSLYIILEYAENGSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           K+G+GGFG VYK      G+E+A+K +   S +  E+  NE+ ++ + +H N+VK  G  
Sbjct: 7   KIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY 66

Query: 539 IQADESMLIYEYMPNKSLD 557
           ++ DE  ++ E+    SL 
Sbjct: 67  LKKDELWIVMEFCSGGSLK 85

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 64.0 bits (156), Expect = 3e-11
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 479 NKLGEGGFGPVYKGTLV-----EGQEIAVKRLSK-GSGQGMEEFKNEVTLIARLQHRNLV 532
            +LGEG FG V            G+++AVK L+  G  Q   +F+ E+ ++  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 533 KLLGCCIQADES--MLIYEYMPNKSLDFFI 560
           K  G C +       LI EY+P+ SL  ++
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 64.2 bits (157), Expect = 3e-11
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 464 DFASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTL 522
           D  S     + + +  K+GEG  G VYK T    G+E+A+K++ +   Q  E   NE+ +
Sbjct: 10  DIVSEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILI 68

Query: 523 IARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           +   +H N+V      +  DE  ++ EYM   SL
Sbjct: 69  MKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 58.4 bits (141), Expect = 5e-11
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 326 NGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSK-NCSCTAYANSDVERGGSGCLLW- 383
           + D F +    KLP  S    +   +L+EC+  C   NCSC ++  +    G  GCLLW 
Sbjct: 2   SDDCFVRLPNTKLPGFSRIVISV-ASLEECASKCLNSNCSCRSFTYN---NGTKGCLLWS 57

Query: 384 FGDLMDMKEYNDGGQDLYIRI 404
              L D + +  GG DLY +I
Sbjct: 58  ESSLGDARLFPSGGVDLYEKI 78

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 62.8 bits (153), Expect = 6e-11
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 481 LGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ 540
           +G+G FG V  G    GQ++AVK L K      + F  E +++  L+H NLV+LLG  +Q
Sbjct: 14  IGKGEFGDVMLGDY-RGQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 541 ADESMLIYEYMPNKSL 556
            +   ++ EYM   SL
Sbjct: 72  GNPLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 481 LGEGGFGPVYKGTLV-------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLV 532
           LG G FG VY+GT             +AVK L KG+  Q  +EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 533 KLLGCCIQADESMLIYEYMPNKSL 556
           KLLG C+  +   +I E M    L
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDL 86

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 59.7 bits (145), Expect = 8e-10
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 481 LGEGGFGPVYKGTLVEGQE----IAVKRLSKGSGQGME-EFKNEVTLIARLQHRNLVKLL 535
           +G G FG V +G L    +    +A+K L  GS      +F  E +++ +  H N+++L 
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71

Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   ++   M+I EYM N SLD F+
Sbjct: 72  GVVTKSRPVMIITEYMENGSLDKFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 59.7 bits (144), Expect = 1e-09
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)

Query: 474 NFASYNKLGEGGFGPVYKG---TLVEGQE---IAVKRLSKGSGQGMEEFKNEVTLIARLQ 527
           N     +LGEG FG V+      L   Q+   +AVK L   S    ++F  E  L+  LQ
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           H ++VK  G C++ D  ++++EYM +  L+ F+
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 1e-09
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 7/83 (8%)

Query: 481 LGEGGFGPVYKGT-LVEGQ----EIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG VYKG  + EG+     +A+K L + +  +  +E  +E  ++A + H ++V+L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 535 LGCCIQADESMLIYEYMPNKSLD 557
           LG C+ + +  LI + MP   L 
Sbjct: 75  LGICL-SSQVQLITQLMPLGCLL 96

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)

Query: 481 LGEGGFGPVYKGT---LVEGQE---IAVKRLSKGSGQGME-EFKNEVTLIARLQHRNLVK 533
           +G+G FG V++     L+  +    +AVK L + +   M+ +F+ E  L+A   H N+VK
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG C       L++EYM    L+ F+
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFL 99

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGM-EEFKNEVTLIARLQHRNLVKLLGCC 538
           K+G+G FG VYKG L    E+AVK         +  +F  E  ++ +  H N+VKL+G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 539 IQADESMLIYEYMPNKSL 556
           +Q     ++ E +P  SL
Sbjct: 62  VQKQPIYIVMELVPGGSL 79

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGM--EEFKNEVTLIARLQHRNLVKLLGC 537
           KLG G FG V+ GT     ++AVK L  G+   M  E F  E  ++ +L+H  LV+L   
Sbjct: 13  KLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAV 69

Query: 538 CIQADESMLIYEYMPNKSL-DF 558
           C + +   ++ EYM   SL DF
Sbjct: 70  CSEEEPIYIVTEYMSKGSLLDF 91

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 1/81 (1%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           ++G G FG V+ G  +E +++A+K + +G+    E+F  E  ++ +L H  LV+L G C 
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 540 QADESMLIYEYMPNKSLDFFI 560
           +     L++E+M +  L  ++
Sbjct: 70  ERSPICLVFEFMEHGCLSDYL 90

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 56.9 bits (137), Expect = 7e-09
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 480 KLGEGGFGPVYKG---TLVEGQE---IAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
           +LGEG FG V+      L+  Q+   +AVK L + S    ++F+ E  L+  LQH+++V+
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
             G C +    ++++EYM +  L+ F+
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 7/88 (7%)

Query: 480 KLGEGGFGPVYKGTLV------EGQEIAVKRLS-KGSGQGMEEFKNEVTLIARLQHRNLV 532
           +LGE  FG VYKG L       + Q +A+K L  K  G   EEFK+E  + +RLQH N+V
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
            LLG   +     +I+ Y  +  L  F+
Sbjct: 72  CLLGVVTKEQPLSMIFSYCSHSDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 55.3 bits (133), Expect = 3e-08
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 14/87 (16%)

Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNL 531
           LGEG FG        P   GT   G+ +AVK L +  GQ     +K E+ ++  L H N+
Sbjct: 12  LGEGHFGKVSLYCYDPANDGT---GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 532 VKLLGCCI-QADESM-LIYEYMPNKSL 556
           VK  GCC  Q  + + LI EY+P  SL
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSL 95

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 27/86 (31%), Positives = 42/86 (48%)

Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           F    KLG G FG V++G       +A+K L        ++F+ EV  + RL+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 535 LGCCIQADESMLIYEYMPNKSLDFFI 560
              C   +   +I E M   SL  F+
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFL 93

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 54.1 bits (130), Expect = 4e-08
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNE 519
           WE +   I          +KLG G +G VY+G   +    +AVK L K     +EEF  E
Sbjct: 1   WEMERTDITM-------KHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKE 52

Query: 520 VTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
             ++  ++H NLV+LLG C +     +I E+M   +L
Sbjct: 53  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 89

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 53.8 bits (129), Expect = 6e-08
 Identities = 28/89 (31%), Positives = 54/89 (60%), Gaps = 5/89 (5%)

Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V++G L + G++   +A+K L  G + +  ++F +E +++ +  H N+++L 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 536 GCCIQADESMLIYEYMPNKSLDFFIFDID 564
           G   +   +M+I EYM N +LD ++ D D
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRDHD 101

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 53.1 bits (128), Expect = 9e-08
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 479 NKLGEGGFGPVYKGTLVE--GQEI--AVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVK 533
            +LG G FG V KG  +   G+E+  AVK L +     G +EF  E +++A+L H  +V+
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           L+G C + +  ML+ E  P   L  ++  
Sbjct: 61  LIGVC-KGEPLMLVMELAPLGPLLKYLKK 88

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 12/93 (12%)

Query: 481 LGEGGFGPVYKGTLVEG----QEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           LGEG FG V +G L +      ++AVK  +L   +   +EEF +E   +    H N++KL
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 535 LGCCIQADES------MLIYEYMPNKSLDFFIF 561
           +G C +A         M+I  +M +  L  F+ 
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL 99

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 480 KLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
           +LGEG FG V+           +   +AVK L   +    ++F+ E  L+  LQH ++VK
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
             G C   D  ++++EYM +  L+ F+
Sbjct: 72  FYGVCGDGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 16/97 (16%)

Query: 480 KLGEGGFGPVY-------------KGTLVEGQE--IAVKRL-SKGSGQGMEEFKNEVTLI 523
           KLGEG FG V+                  +GQ   +AVK L +  +     +F  E+ ++
Sbjct: 12  KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +RL++ N+++LLG C+  D   +I EYM N  L+ F+
Sbjct: 72  SRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFL 108

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 52.5 bits (126), Expect = 2e-07
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 481 LGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ 540
           LG G FG V+ G      ++A+K + +G+    ++F  E  ++ +L H NLV+L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 541 ADESMLIYEYMPNKSL 556
                ++ EYM N  L
Sbjct: 71  QRPIFIVTEYMANGCL 86

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.2 bits (126), Expect = 2e-07
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH-R 529
           ++    KLGEG FG VY       + +A+K L+K      + +E F  E+ ++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           N+VKL           L+ EY+   SL+  +
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89

Length = 384

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)

Query: 481 LGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME-EFKNEVTLIARLQHRNLVKLLGCCI 539
           LG+G FG V+KGTL +   +AVK   +   Q ++ +F +E  ++ +  H N+VKL+G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 540 QADESMLIYEYMPNKSLDFFIF 561
           Q     ++ E +P    DF  F
Sbjct: 63  QRQPIYIVMELVPGG--DFLSF 82

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 480 KLGEGGFGPVYKGTLV-----EGQEIAVKRLSK-GSGQGMEEFKNEVTLIARLQHRNLVK 533
           +LGE  FG +YKG L        Q +A+K L    + Q   EF+ E +L+A L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           LLG   Q     +++EY+    L  F+
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFL 98

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 7/77 (9%)

Query: 481 LGEGGFGPVY----KGTLVEGQE--IAVKRLSKGSGQGME-EFKNEVTLIARLQHRNLVK 533
           LG G FG V+    KG   EG E  + VK L K   + ++ EF+ E+ +  +L H+N+V+
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 534 LLGCCIQADESMLIYEY 550
           LLG C +A+   +I EY
Sbjct: 73  LLGLCREAEPHYMILEY 89

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE D  SI           KLG G FG V++G       +AVK L  G+    ++F  E 
Sbjct: 1   WEIDRTSIQLL-------RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEA 52

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            ++ +L+H  L++L   C   +   ++ E M   SL
Sbjct: 53  QIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSL 88

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 18/99 (18%)

Query: 480 KLGEGGFGPVY-------KGTLVEGQEI----------AVKRLSKG-SGQGMEEFKNEVT 521
           KLGEG FG V+       +    +              AVK L    S    E+F  EV 
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 522 LIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +++RL   N+ +LLG C       +I EYM N  L+ F+
Sbjct: 72  ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLS------KGSGQGMEEFKNEVTLIARLQHRNLV 532
             LG+G +G VY G   +GQ IAVK++         + +  E+ + EV L+  L+H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 533 KLLGCCIQADESMLIYEYMPNKSL 556
           + LG C+  +   +  E++P  S+
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSI 89

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 51.0 bits (122), Expect = 5e-07
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 481 LGEGGFGPVYKGTLVEGQ-EIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           LG+G +G VY    +  Q  IA+K + +   + ++    E+ L + L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 540 QADESMLIYEYMPNKSL 556
           +     +  E +P  SL
Sbjct: 76  ENGFFKIFMEQVPGGSL 92

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 51.0 bits (122), Expect = 5e-07
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG G FG V+ G      ++A+K L +GS    E F  E  L+ +LQH  LV+L     
Sbjct: 13  KLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 540 QADESMLIYEYMPNKSL-DF 558
           Q +   +I EYM N SL DF
Sbjct: 72  Q-EPIYIITEYMENGSLVDF 90

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 51.5 bits (123), Expect = 5e-07
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 18/99 (18%)

Query: 480 KLGEGGFGPVYKGTLVEGQE-----------------IAVKRL-SKGSGQGMEEFKNEVT 521
           KLGEG FG V+   +V  Q+                 +AVK L    +     +F  EV 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 522 LIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +++RL+  N+++LLG C+  D   +I EYM N  L+ F+
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 51.3 bits (122), Expect = 5e-07
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 467 SIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIAR 525
           SI      +  Y K+G+G  G V+    V  GQE+A+K+++       E   NE+ ++  
Sbjct: 13  SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKE 72

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           L++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 73  LKNPNIVNFLDSFLVGDELFVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 50.6 bits (121), Expect = 6e-07
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 481 LGEGGFGPVYKGTLVE----GQ----EIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
           LG+G F  ++KG   E    G+    E+ +K L K      E F    +++++L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
              G C+  DES+++ EY+   SLD ++
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYL 90

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.9 bits (122), Expect = 7e-07
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 471 ATDNFASYNKLGEGGFGPVYKGTLVEG-------QEIAVKRL-SKGSGQGMEEFKNEVTL 522
             D+      LG G FG VY+G L  G        ++AVK L    S Q   +F  E  +
Sbjct: 4   PRDSITLLRALGHGAFGEVYEG-LYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALI 62

Query: 523 IARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +++  H+N+V+L+G   +     ++ E M    L  F+
Sbjct: 63  MSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 50.5 bits (121), Expect = 8e-07
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 14/91 (15%)

Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
           LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N+V
Sbjct: 12  LGKGNFGSVELCRYDPLQDNT---GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIV 68

Query: 533 KLLGCCIQA--DESMLIYEYMPNKSL-DFFI 560
           K  G C  A      L+ EY+P  SL D+  
Sbjct: 69  KYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQ 99

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 50.4 bits (120), Expect = 8e-07
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG G FG V+ G      ++AVK L  G+   ++ F  E  L+  LQH  LV+L     
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 540 QADESMLIYEYMPNKS-LDFF 559
           + +   +I EYM   S LDF 
Sbjct: 72  KEEPIYIITEYMAKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 50.1 bits (120), Expect = 9e-07
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 480 KLGEGGFGPVYKGTLVEGQ----EIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKL 534
           KLG+G FG V +G           +AVK L        M++F  E  ++  L H NL++L
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 535 LGCCIQADESMLIYEYMPNKSL 556
            G  +     M++ E  P  SL
Sbjct: 62  YGVVLT-HPLMMVTELAPLGSL 82

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 481 LGEGGFGPVYKGTLVEGQ------EIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVK 533
           LGEG FG V K T    +       +AVK L + +    + +  +E  L+ ++ H +++K
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
           L G C Q    +LI EY    SL  F+
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFL 94

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 8/83 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKR-----LSKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           LG+G FG VY    V+ G+E+AVK+      S  + + +   + E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 535 LGCCIQADESMLIY-EYMPNKSL 556
            G C++ DE++ I+ EYMP  S+
Sbjct: 70  YG-CLRDDETLSIFMEYMPGGSV 91

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)

Query: 481 LGEGGFGPVYKG-TLVEGQEIAVKR--LSKGSGQG-------MEEFKNEVTLIARLQHRN 530
           +G G FG VY G     G+ +AVK+  L   S          ++    E+ L+  LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSL 556
           +V+ LG  + AD   +  EY+P  S+
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSV 93

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 49.1 bits (118), Expect = 3e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 480 KLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN--EVTLIARLQ-HRNLVKLL 535
           +LG+G FG VY     E  E+ A+K++ K      EE  N  EV  + +L  H N+VKL 
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 536 GCCIQADESMLIYEYM 551
               + DE   ++EYM
Sbjct: 65  EVFRENDELYFVFEYM 80

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 7/82 (8%)

Query: 481 LGEGGFGPVYKGTLV-EGQEI----AVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG VYKG  V EG+ +    A+K L++ +G +   EF +E  ++A + H +LV+L
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 535 LGCCIQADESMLIYEYMPNKSL 556
           LG C+ +    L+ + MP+  L
Sbjct: 75  LGVCL-SPTIQLVTQLMPHGCL 95

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 20/100 (20%)

Query: 480 KLGEGGFGPVYKGTLVEGQE------------------IAVKRL-SKGSGQGMEEFKNEV 520
           KLGEG FG V+     EG E                  +AVK L    +     +F  E+
Sbjct: 12  KLGEGQFGEVHLCE-AEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEI 70

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            +++RL+  N+++LL  CI +D   +I EYM N  L+ F+
Sbjct: 71  KIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 48.3 bits (115), Expect = 4e-06
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V +G L + G+    +A+K L  G + +   +F +E +++ +  H N++ L 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   ++   M+I E+M N +LD F+
Sbjct: 72  GVVTKSRPVMIITEFMENGALDSFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 47.6 bits (113), Expect = 8e-06
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 467 SIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIAR 525
           S+      +  + K+G+G  G VY    V  GQE+A+K+++       E   NE+ ++  
Sbjct: 13  SVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE 72

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            +H N+V  L   +  DE  ++ EY+   SL
Sbjct: 73  NKHPNIVNYLDSYLVGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 47.5 bits (113), Expect = 9e-06
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 474 NFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFK-NEVTLIARLQHRNL 531
           NF    KLGEG +  VYKG     G+ +A+K +   + +G       E++L+  L+H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 532 VKLLGCCIQADESMLIYEYMPN 553
           V+L       ++ ML++EYM  
Sbjct: 61  VRLHDVIHTENKLMLVFEYMDK 82

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG G FG V+ GT     ++AVK L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYA-VV 70

Query: 540 QADESMLIYEYMPNKSLDFFIFDIDWNGLML 570
             +   ++ EYM   SL  F+ D +   L L
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKDGEGRALKL 101

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 6/86 (6%)

Query: 481 LGEGGFGPVYKGTLV--EGQEI--AVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLL 535
           +G+G FG VY GTL+  +GQ+I  AVK L++ +  + +E+F  E  ++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C+ ++ S +++  YM +  L  FI
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFI 88

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN---EVTLIARLQHRN 530
           F+   ++G G FG VY    V   E+ A+K++S    Q  E++++   EV  + +L+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            ++  GC ++   + L+ EY    + D  
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLL 105

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
              ++ K+GEG  G V   T    G+++AVK++     Q  E   NEV ++   QH N+V
Sbjct: 20  YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79

Query: 533 KLLGCCIQADESMLIYEYMPNKSL 556
           ++    +  DE  ++ E++   +L
Sbjct: 80  EMYSSYLVGDELWVVMEFLEGGAL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           +LG G FG V  G      ++A+K + +GS    +EF  E  ++ +L H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 540 QADESMLIYEYMPNKSL 556
           +     ++ EYM N  L
Sbjct: 70  KQRPIYIVTEYMSNGCL 86

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN---EVTLIARLQHRN 530
           F    ++G G FG VY    V   E+ A+K++S    Q  E++++   EV  + R++H N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            ++  GC ++   + L+ EY    + D  
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSASDLL 115

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|238074 cd00129, PAN_APPLE, PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 8/81 (9%)

Query: 328 DEFPKYVKLKLPDTSSSWFNASMN-LKECSELCSKN---CSCTAYANSDVERGGSGCLLW 383
           DEF K     L   +        N   EC+  C KN    SC A+      R    CL +
Sbjct: 2   DEFCKSAGTTLIKIALKIKTTKANTADECANRCEKNGLPFSCKAFV-FAKARK--QCLWF 58

Query: 384 -FGDLMDMKEYNDGGQDLYIR 403
            F  +  +++    G DLY  
Sbjct: 59  PFNSMSGVRKEFSHGFDLYEN 79

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. Length = 80

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V  G L + G+    +A+K L  G + +   +F +E +++ +  H N++ L 
Sbjct: 12  IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   ++   M++ EYM N SLD F+
Sbjct: 72  GVVTKSKPVMIVTEYMENGSLDAFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           +LG G FG V+ G      ++A+K +++G+    E+F  E  ++ +L H  LV+L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 540 QADESMLIYEYMPNKSL 556
           Q     ++ E+M N  L
Sbjct: 70  QQKPLYIVTEFMENGCL 86

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.0 bits (110), Expect = 3e-05
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-Q 527
           D+F     +GEG F  V      E  +E A+K L K      + ++  K E  ++ RL  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 528 HRNLVKLLGCCIQADESM-LIYEYMPN 553
           H  ++KL     Q +E++  + EY PN
Sbjct: 61  HPGIIKLY-YTFQDEENLYFVLEYAPN 86

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 45.9 bits (109), Expect = 3e-05
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 474 NFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRL---SKGSGQGMEEFKNEVTLIARLQHR 529
           ++    K+GEG +G VYKG     GQ +A+K++   S+  G      + E++L+  LQH 
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIR-EISLLKELQHP 59

Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+V L    +Q     LI+E++
Sbjct: 60  NIVCLQDVLMQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           KLGEG +G VYK      GQ +A+K +     + ++E   E++++ +     +VK  G  
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVKYYGSY 67

Query: 539 IQADESMLIYEY 550
            +  +  ++ EY
Sbjct: 68  FKNTDLWIVMEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 480 KLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFKN--EVTLIARLQHRNLVKLLG 536
           K+GEG +G VYK    + G+ +A+K++               E+ L+  L H N++KLL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 537 CCIQADESMLIYEYM 551
                 +  L++E+M
Sbjct: 66  VFRHKGDLYLVFEFM 80

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 18/116 (15%)

Query: 453 HMKEDM---ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG 508
           H++ D+   E+WE                 +LG+G FG VYK    E G   A K +   
Sbjct: 3   HVRRDLDPNEVWEI--------------IGELGDGAFGKVYKAKNKETGALAAAKVIETK 48

Query: 509 SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDID 564
           S + +E++  E+ ++A   H  +VKLLG      +  ++ E+ P  ++D  + ++D
Sbjct: 49  SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELD 104

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 45.6 bits (108), Expect = 4e-05
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN---EVTLIARLQHRN 530
           F    ++G G FG VY    V   E+ A+K++S    Q  E++++   EV  + +L+H N
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 531 LVKLLGCCIQADESMLIYEY 550
            ++  GC ++   + L+ EY
Sbjct: 77  TIEYKGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN---EVTLIARLQHRN 530
           F   +++G G FG VY  T     E+ AVK++S    Q  E++++   EV  + +L+H N
Sbjct: 23  FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN 82

Query: 531 LVKLLGCCIQADESMLIYEY 550
            ++  GC ++   + L+ EY
Sbjct: 83  TIEYKGCYLKEHTAWLVMEY 102

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.0 bits (107), Expect = 5e-05
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 479 NKLGEGGFGPVYKG-TLVEGQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKLL 535
           NK+G G FG VY    L  G+ +AVK  R+     + ++E  +E+ ++  L+H NLVK  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 536 GCCIQADESMLIYEY 550
           G  +  ++  +  EY
Sbjct: 66  GVEVHREKVYIFMEY 80

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 45.3 bits (108), Expect = 5e-05
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 14/108 (12%)

Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN-----EVTLIARLQHRNLV 532
            KLGEG +  VYK    E G+ +A+K++  G  +  ++  N     E+ L+  L+H N++
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65

Query: 533 KLLGCCIQADESMLIYEYMP--------NKSLDFFIFDIDWNGLMLTR 572
            LL          L++E+M         +KS+     DI    LM  R
Sbjct: 66  GLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLR 113

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 44.8 bits (107), Expect = 6e-05
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 15/81 (18%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLIARLQHRN 530
           KLGEG +G VYK      G+ +A+K++       ++  +         E++L+  L+H N
Sbjct: 6   KLGEGTYGVVYKARDKKTGEIVALKKIR------LDNEEEGIPSTALREISLLKELKHPN 59

Query: 531 LVKLLGCCIQADESMLIYEYM 551
           +VKLL       +  L++EY 
Sbjct: 60  IVKLLDVIHTERKLYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 6e-05
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQEI-AVKR--LSKGSGQGMEEFKNEVTLIARLQHRN 530
            +    ++G+G FG VY        ++  +K   LS  S +  E+  NEV ++ +L H N
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           ++K      +  +  ++ EY     L   I
Sbjct: 61  IIKYYESFEEKGKLCIVMEYADGGDLSQKI 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 44.5 bits (106), Expect = 7e-05
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 30/114 (26%)

Query: 479 NKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLIARLQHR 529
            ++GEG +G VYK      G+ +A+K++       ME  K         E+ L+ +L+H 
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIR------MENEKEGFPITAIREIKLLQKLRHP 58

Query: 530 NLVKLLGCCIQADES--MLIYEYMPNKSLDFFIFDIDWNGLMLTRSSK---SHI 578
           N+V+L        +    +++EYM +          D  GL+ +   K   S I
Sbjct: 59  NIVRLKEIVTSKGKGSIYMVFEYMDH----------DLTGLLDSPEVKFTESQI 102

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 44.5 bits (105), Expect = 7e-05
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 481 LGEGGFGPVYK------GTLVEGQEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVK 533
           LG G F   Y+      GTL+  +++   R +    +  +E  + E+ L+ARL H ++++
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67

Query: 534 LLGCCIQADESMLIYEYMPNKSL 556
           +LG   +     L  E+M   S+
Sbjct: 68  MLGATCEDSHFNLFVEWMAGGSV 90

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 1e-04
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 7/78 (8%)

Query: 481 LGEGGFGPVYKGTL------VEGQEIAVKRLSKGSGQGME-EFKNEVTLIARLQHRNLVK 533
           LG+G FG VY+G             +A+K +++ +      EF NE +++      ++V+
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 534 LLGCCIQADESMLIYEYM 551
           LLG       ++++ E M
Sbjct: 74  LLGVVSTGQPTLVVMELM 91

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 44.3 bits (105), Expect = 1e-04
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 8/78 (10%)

Query: 481 LGEGGFGPVYKGTLV------EGQEIAVKRL-SKGSGQGMEEFKNEVTLIARL-QHRNLV 532
           LGEG FG V K   V      E   +AVK L    + + + +  +E+ ++  + +H+N++
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79

Query: 533 KLLGCCIQADESMLIYEY 550
            LLG C Q     ++ EY
Sbjct: 80  NLLGVCTQEGPLYVVVEY 97

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 8/83 (9%)

Query: 481 LGEGGFGPVYKG-TLVEGQEIAVKRLS-----KGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG VY+G  L +G   AVK +S     +   + +++ + E+ L+++LQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 535 LGCCIQADESMLIY-EYMPNKSL 556
           LG   + ++++ I+ E +P  SL
Sbjct: 68  LG-TEREEDNLYIFLELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 6/85 (7%)

Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFK--NEVTLIARLQ 527
           A  ++ +  KLGEG +  VYKG + + GQ +A+K +S  + +G+  F    E +L+  L+
Sbjct: 3   AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV-PFTAIREASLLKGLK 61

Query: 528 HRNLVKLLGCCIQADESM-LIYEYM 551
           H N+V LL   I   E++  ++EYM
Sbjct: 62  HANIV-LLHDIIHTKETLTFVFEYM 85

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 467 SIAKATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR 525
           S+      +  + K+G+G  G VY    +  GQE+A+K+++       E   NE+ ++  
Sbjct: 13  SVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE 72

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 73  NKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)

Query: 481 LGEGGFGPVYKGTLVE---------GQEIAVKRLSKGSGQGM-EEFKNEVTLIARLQHRN 530
           LG+G F  +YKG L           GQE++V     GS       F    +L+++L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           LVKL G C+  DE++++ EY+    LD F+
Sbjct: 63  LVKLYGVCV-RDENIMVEEYVKFGPLDVFL 91

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG G FG V+  T  +  ++AVK +  GS   +E F  E  ++  LQH  LVK L   +
Sbjct: 13  KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVK-LHAVV 70

Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   +I E+M   S LDF 
Sbjct: 71  TKEPIYIITEFMAKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 70

Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 10/85 (11%)

Query: 481 LGEGGFGPVY------KGTLVEGQEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVK 533
           LGEG FG V       +G    G+++AVK L   SG   + + K E+ ++  L H N+VK
Sbjct: 12  LGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 70

Query: 534 LLGCCIQADES--MLIYEYMPNKSL 556
             G C +   +   LI E++P+ SL
Sbjct: 71  YKGICTEDGGNGIKLIMEFLPSGSL 95

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 481 LGEGGFGPVYKGTLVEGQEI---AVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKLL 535
           LGEG FG V +G L +   I   AVK  +++  +   ME+F +E   +    H N+++L+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 536 GCCIQADES------MLIYEYMPNKSLDFFIF 561
           G C+Q  ES      ++I  +M +  L  F+ 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLL 98

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           LG+G FG VYK    E G   A K +   S + +E+F  E+ +++  +H N+V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 540 QADESMLIYEYMPNKSLD 557
             ++  ++ E+    +LD
Sbjct: 73  YENKLWILIEFCDGGALD 90

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 11/84 (13%)

Query: 479 NKLGEGGFGPVYKGT-LVEGQEIAVKRLS-KGSGQGMEEFK-NEVTLIARLQ---HRNLV 532
            ++GEG +G VYK   L  G+ +A+K++    S +G+      E+ L+ +L+   H N+V
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 533 KLLGCC--IQADESM---LIYEYM 551
           +LL  C   + D  +   L++E++
Sbjct: 65  RLLDVCHGPRTDRELKLTLVFEHV 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 474 NFASYNKLGEGGFGPVYKG-TLVEGQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRN 530
           NF    K+GEG +G VYK    + G+ +A+K  RL   +         E++L+  L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 531 LVKLLGCCIQADESM-LIYEYM 551
           +VKLL   I  +  + L++E++
Sbjct: 61  IVKLLD-VIHTENKLYLVFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 43.1 bits (102), Expect = 3e-04
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 17/88 (19%)

Query: 474 NFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLIA 524
            F   N++GEG +G VY+      G+ +A+K++       M+  ++        E+TL+ 
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVR------MDNERDGIPISSLREITLLL 61

Query: 525 RLQHRNLVKLLGCCI--QADESMLIYEY 550
            L+H N+V+L    +    D   L+ EY
Sbjct: 62  NLRHPNIVELKEVVVGKHLDSIFLVMEY 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.8 bits (100), Expect = 3e-04
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 467 SIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR 525
           S+      +  + K+G+G  G VY    +  GQE+A+++++       E   NE+ ++  
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 74  NKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 42.8 bits (100), Expect = 3e-04
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)

Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHR 529
           D++    KLGEG +  VYKG + V G+ +A+K  RL +  G      + E +L+  L+H 
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIR-EASLLKGLKHA 63

Query: 530 NLVKLLGCCIQADESM-LIYEYM 551
           N+V LL   I   E++ L++EY+
Sbjct: 64  NIV-LLHDIIHTKETLTLVFEYV 85

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 43.3 bits (102), Expect = 3e-04
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 21/158 (13%)

Query: 420 IIASVL--LMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFA- 476
            I   L   + + +VA  F   R +     L ++ +  ED   WE  F   +K + +   
Sbjct: 631 YITCTLGAFLVLALVAFGFVFIRGR-NNLELKRVEN--ED-GTWELQFFD-SKVSKSITI 685

Query: 477 --------SYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ 527
                     N +  G  G  YKG ++  G +  VK ++  +        +E+  + +LQ
Sbjct: 686 NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQ 741

Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDW 565
           H N+VKL+G C     + LI+EY+  K+L   + ++ W
Sbjct: 742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSW 779

Length = 968

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLS---KGSGQGMEEFKNEVTLIARLQ 527
             NF    K+G+G F  VYK   L++G+ +A+K++        +  ++   E+ L+ +L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 528 HRNLVKLLGCCIQADESMLIYEYMP 552
           H N++K L   I+ +E  ++ E   
Sbjct: 61  HPNVIKYLASFIENNELNIVLELAD 85

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 15/100 (15%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQE-----IAVKRL-SKGSGQ 511
           E WEF         DN      LG G FG V + T    G+E     +AVK L +     
Sbjct: 31  EKWEF-------PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD 83

Query: 512 GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY 550
             E   +E+ +++ L QH+N+V LLG C      ++I EY
Sbjct: 84  EREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEY 123

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 42.3 bits (99), Expect = 5e-04
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 468 IAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEI----AVKRLSKG-SGQGMEEFKNEVT 521
           I K T+ F     LG G FG VYKG  + EG+++    A+K L +  S +  +E  +E  
Sbjct: 3   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 61

Query: 522 LIARLQHRNLVKLLGCCIQADESMLIYEYMP 552
           ++A + + ++ +LLG C+ +    LI + MP
Sbjct: 62  VMASVDNPHVCRLLGICLTS-TVQLITQLMP 91

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLS-KGSGQGMEEFK-NEVTLIARLQHRN 530
            +    K+GEG +G V+K    E  EI A+KR+      +G+      E+ L+  L+H+N
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 531 LVKLLGCCIQADESMLIYEY 550
           +V+L        +  L++EY
Sbjct: 61  IVRLYDVLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 479 NKLGEGGFGPVYKG---TLVEGQEIAVKRL-SKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           +++G G FG V  G     +    + VK L +  +      F  EV     L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 535 LGCCIQADESMLIYEYMP 552
           LG CI++   +L+ E+ P
Sbjct: 61  LGQCIESIPYLLVLEFCP 78

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 481 LGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ 540
           +G+G FG V  G    G ++AVK +   +    + F  E +++ +L+H NLV+LLG  ++
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 541 ADESMLIY-EYMPNKSL 556
               + I  EYM   SL
Sbjct: 71  EKGGLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 41.5 bits (97), Expect = 7e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
            +GEG FG V +G    GQ++AVK +        + F  E  ++ +L H+NLV+LLG
Sbjct: 13  IIGEGEFGAVLQGEYT-GQKVAVKNIK--CDVTAQAFLEETAVMTKLHHKNLVRLLG 66

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 41.5 bits (97), Expect = 8e-04
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
           DNF    K+GEG  G V   T+   G+ +AVK++     Q  E   NEV ++   QH N+
Sbjct: 23  DNFI---KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79

Query: 532 VKLLGCCIQADESMLIYEYMPNKSL 556
           V++    +  DE  ++ E++   +L
Sbjct: 80  VEMYNSYLVGDELWVVMEFLEGGAL 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 41.5 bits (98), Expect = 8e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 15/65 (23%)

Query: 480 KLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLIARLQHRN 530
           KLGEG FG VYK   +  G+ +A+K++       M   K+        E+ ++ +L+H N
Sbjct: 15  KLGEGTFGEVYKARQIKTGRVVALKKIL------MHNEKDGFPITALREIKILKKLKHPN 68

Query: 531 LVKLL 535
           +V L+
Sbjct: 69  VVPLI 73

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 481 LGEGGFGPVYKGTLVEG---QEIAVKRLSK-GSGQGMEEFKNEVTLIARL-QHRNLVKLL 535
           +GEG FG V K  + +     + A+KR+ +  S     +F  E+ ++ +L  H N++ LL
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74

Query: 536 GCCIQADESMLIYEYMPNKS-LDFF 559
           G C       L  EY P+ + LDF 
Sbjct: 75  GACEHRGYLYLAIEYAPHGNLLDFL 99

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 13/81 (16%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKR--LSKGSGQGMEEFKNEVTLIARLQHRNLVKLL- 535
           ++GEG  G V+K    E G+ +A+K+  L +  G    +   E+  +   QH  +VKLL 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 536 ----GCCIQADESMLIYEYMP 552
               G        +L+ EYMP
Sbjct: 67  VFPHGSGF-----VLVMEYMP 82

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 481 LGEGGFGPVYKG--TLVEGQE--IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           LG G FG + +G   L   +E  +A+  L  G S +    F  E   + +  H N+V+L 
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE 72

Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   + +  M++ EYM N +LD F+
Sbjct: 73  GVITRGNTMMIVTEYMSNGALDSFL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 3/86 (3%)

Query: 474 NFASYNKLGEGGFGPVYKGTL-VEGQEIAVKR--LSKGSGQGMEEFKNEVTLIARLQHRN 530
           +F   NK+G+G FG V+K     + +  A+K+  LSK + +  EE  +E  ++A+L    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSL 556
           +++     +   +  ++ EY  N  L
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDL 86

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
            ++G G +G VYK   +   E+ A+K +    G   E  + E++++   +H N+V   G 
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGS 68

Query: 538 CIQADESMLIYEYMPNKSLD 557
            ++ D+  ++ EY    SL 
Sbjct: 69  YLRRDKLWIVMEYCGGGSLQ 88

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT     ++A+K L  G+    E F  E  ++ +L+H  LV L    +
Sbjct: 13  KLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYA-VV 70

Query: 540 QADESMLIYEYMPNKSLDFFIFDIDWNGLML 570
             +   ++ E+M   SL  F+ + D   L L
Sbjct: 71  SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKL 101

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 40.1 bits (93), Expect = 0.002
 Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRL-----SKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           LG+G FG VY    V+ G+E+A K++     S  + + +   + E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 535 LGCCI-QADESMLIY-EYMPNKSL 556
            GC   +A++++ I+ EYMP  S+
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSV 93

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 480 KLGEGGFGPVYKG-TLVEGQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
           KLGEG +  VYKG + + GQ +A+K  RL    G      + E +L+  L+H N+V  L 
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIR-EASLLKDLKHANIV-TLH 69

Query: 537 CCIQADESM-LIYEYM 551
             I   +++ L++EY+
Sbjct: 70  DIIHTKKTLTLVFEYL 85

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
             S+ K+GEG  G V   T    G+++AVK++     Q  E   NEV ++    H N+V 
Sbjct: 24  LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD 83

Query: 534 LLGCCIQADESMLIYEYMPNKSL 556
           +    +  DE  ++ E++   +L
Sbjct: 84  MYNSYLVGDELWVVMEFLEGGAL 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE--FKNEVTLIARLQHRNLVKLLG 536
            +GEG +G V K    E GQ +A+K+  +     M +     E+ ++ +L+H NLV L+ 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 537 CCIQADESMLIYEYMPNKSLD 557
              +     L++E++ +  LD
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLD 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 474 NFASYNKLGEGGFGPVY--KGTLVEGQEIAVKR--LSKGSGQGMEEFKNEVTLIARLQHR 529
            +    K+GEG FG +Y  K    + +   +K   L+K   +  E  K EV L+A+++H 
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAK-SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP 59

Query: 530 NLVKLLGCCIQADESMLIYEY 550
           N+V       +     ++ EY
Sbjct: 60  NIVTFFASFQENGRLFIVMEY 80

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 17/89 (19%)

Query: 474 NFASYNKLGEGGFGPVYK-GTLVEGQEIAVKR--LSKGSGQGMEEFKNEVTLIARLQHRN 530
           +F    KLG+G +G VYK   L + Q  A+K   L   S +  E+  NE+ ++A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 531 LVK-----LLGC--CIQADESMLIYEYMP 552
           ++      L G   CI       + EY P
Sbjct: 61  IISYKEAFLDGNKLCI-------VMEYAP 82

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 481 LGEGGFGPVYKGTLV-EGQEI----AVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG V+KG  + EG  I    A+K +   SG Q  +E  + +  +  L H  +V+L
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 535 LGCCIQADESMLIYEYMPNKSL 556
           LG C  A    L+ +  P  SL
Sbjct: 75  LGICPGA-SLQLVTQLSPLGSL 95

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 480 KLGEGGFGPVYKGTLV--EGQEI--AVKRLSKGSGQGM-EEFKNEVTLIARLQHRNLVKL 534
            +GEG FG VY+G  +  E ++I  AVK     +   + E+F  E  ++ +  H ++VKL
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 535 LGCC 538
           +G  
Sbjct: 73  IGVI 76

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 468 IAKATDNFASYNKLGEGGFGPVYKGTLVEG-----QEIAVKRLSKGSGQ-GMEEFKNEVT 521
           IA + D     + L EG FG ++ G L++      +E+ VK +   + +  +     E  
Sbjct: 1   IAISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESC 60

Query: 522 LIARLQHRNLVKLLGCCIQ-ADESMLIYEYMPNKSLDFFI 560
           L+  L H+N++ +L  CI+  +   ++Y YM   +L  F+
Sbjct: 61  LLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFL 100

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRL-----SKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG VY     + G+E+AVK++     S+ + + +   + E+ L+  L+H  +V+ 
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69

Query: 535 LGCCIQADESML--IYEYMPNKSL 556
            GC    +E  L    EYMP  S+
Sbjct: 70  YGCLRDPEEKKLSIFVEYMPGGSI 93

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 15/26 (57%), Positives = 17/26 (65%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQ 498
           D+F    KLGEG FG VYK +LV  Q
Sbjct: 132 DDFVLGKKLGEGAFGVVYKASLVNKQ 157

Length = 566

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	579
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.95
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.93
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.91
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.85
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.56
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.53
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.52
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.46
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.45
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.41
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.4
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.38
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.36
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.31
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.29
KOG3653	534	consensus Transforming growth factor beta/activin	99.24
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.22
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.22
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.16
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.15
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.14
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.12
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.12
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.09
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.09
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.08
KOG0605	550	consensus NDR and related serine/threonine kinases	99.08
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.07
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.05
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.05
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.05
PHA02988	283	hypothetical protein; Provisional	99.04
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.03
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.02
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.02
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.01
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.99
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.98
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	98.98
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.98
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.98
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.97
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.95
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.95
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.94
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	98.94
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.94
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.93
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.93
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.93
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.92
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.92
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.91
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.91
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.91
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.91
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.9
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.9
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.89
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.89
KOG0586	596	consensus Serine/threonine protein kinase [General	98.89
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.88
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.88
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.88
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.88
PTZ00267	478	NIMA-related protein kinase; Provisional	98.87
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.87
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.87
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.87
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.86
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.86
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.86
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.86
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.86
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.86
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.86
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.86
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.86
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.85
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.85
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.85
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.85
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.85
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.84
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.84
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.84
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.84
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.84
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.84
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.84
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.84
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.84
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.84
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.83
KOG0198	313	consensus MEKK and related serine/threonine protei	98.83
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.83
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.83
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.83
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.82
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.82
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.82
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.82
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.82
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.82
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.82
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.82
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.82
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.81
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.81
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.81
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.81
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.81
KOG0610	459	consensus Putative serine/threonine protein kinase	98.81
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.81
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.81
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.81
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.8
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.8
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.8
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.8
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.8
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.8
KOG4721	904	consensus Serine/threonine protein kinase, contain	98.79
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.79
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.79
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.79
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.79
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.79
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.79
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.79
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.79
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.79
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.79
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.78
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.78
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.78
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.78
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.78
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.78
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.78
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.78
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.78
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.78
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.77
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.77
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.77
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.77
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.77
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.77
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.77
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.77
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.76
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.76
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.76
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.76
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.76
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.76
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.76
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.76
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.76
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.76
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.75
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.75
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.75
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.75
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.75
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.75
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.75
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.75
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.75
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.75
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.75
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.74
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.74
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.74
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.74
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.74
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.74
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.73
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.73
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.73
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.73
KOG0578	550	consensus p21-activated serine/threonine protein k	98.73
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.73
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.72
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.72
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.72
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.72
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.72
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.72
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.72
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.72
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.72
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.72
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.72
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.72
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.72
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.71
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.71
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.71
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.71
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.71
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.71
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.71
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.7
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.7
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.7
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.7
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.7
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.7
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.7
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.69
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.69
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.69
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.68
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.68
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.68
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.68
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.68
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.68
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.68
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.68
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.68
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.68
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.68
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.68
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.68
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.68
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.68
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.67
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.67
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.67
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.67
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.67
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.66
PTZ00283	496	serine/threonine protein kinase; Provisional	98.66
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.66
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.66
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.66
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.66
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.66
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.66
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.65
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.65
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.65
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.65
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.65
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.65
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.64
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.64
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.64
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.64
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.64
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.63
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.63
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.63
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.63
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.63
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.63
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.62
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.62
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.62
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.62
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.61
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.61
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.61
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.61
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.6
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.6
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.6
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.58
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.58
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.58
KOG0589	426	consensus Serine/threonine protein kinase [General	98.58
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.58
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.57
PRK09188	365	serine/threonine protein kinase; Provisional	98.57
PLN00009	294	cyclin-dependent kinase A; Provisional	98.57
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.57
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.57
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.56
PHA03211	461	serine/threonine kinase US3; Provisional	98.56
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.55
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.55
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.55
PHA03212	391	serine/threonine kinase US3; Provisional	98.55
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.55
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.54
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.54
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.53
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.53
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.53
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.52
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.52
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.51
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.5
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.5
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.5
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.5
PTZ00036	440	glycogen synthase kinase; Provisional	98.49
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.48
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.48
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.48
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.48
PHA03209	357	serine/threonine kinase US3; Provisional	98.47
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.47
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.47
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.46
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.45
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.45
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.45
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.44
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.43
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.42
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.42
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.42
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.41
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.41
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.4
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.4
PRK10345	210	hypothetical protein; Provisional	98.39
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.39
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.39
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.38
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.37
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.37
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.37
PHA03207	392	serine/threonine kinase US3; Provisional	98.36
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.36
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.36
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.35
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.35
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.34
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.34
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.34
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.34
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.34
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.34
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.34
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.33
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.32
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.32
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.32
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.31
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.31
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.3
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.28
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.27
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.27
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.23
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.23
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.22
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.22
PTZ00284	467	protein kinase; Provisional	98.21
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.2
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.18
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.16
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.15
PRK14879	211	serine/threonine protein kinase; Provisional	98.15
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.12
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.11
PHA03210	501	serine/threonine kinase US3; Provisional	98.09
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.09
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.07
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.06
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.04
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.04
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.01
KOG1152	772	consensus Signal transduction serine/threonine kin	97.99
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.99
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	97.95
KOG0690	516	consensus Serine/threonine protein kinase [Signal	97.94
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	97.94
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.91
KOG0584	632	consensus Serine/threonine protein kinase [General	97.91
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	97.9
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.9
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.86
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.85
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.75
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.71
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.68
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	97.64
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.62
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.53
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.51
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.47
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.45
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.44
smart00090	237	RIO RIO-like kinase.	97.37
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.31
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.31
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.3
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.2
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.2
PHA02882	294	putative serine/threonine kinase; Provisional	97.05
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.03
PRK12274	218	serine/threonine protein kinase; Provisional	97.02
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.96
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.81
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.78
KOG1290	590	consensus Serine/threonine protein kinase [Signal	96.76
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.71
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.56
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	96.55
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	96.54
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	96.45
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.35
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.12
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	95.93
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	95.89
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	95.83
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.79
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	95.48
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	94.54
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	94.53
COG0661	517	AarF Predicted unusual protein kinase [General fun	92.32
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	91.83
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	91.3
KOG1235	538	consensus Predicted unusual protein kinase [Genera	90.78
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	89.1
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	86.62
PRK10593	297	hypothetical protein; Provisional	84.72
cd00053	36	EGF Epidermal growth factor domain, found in epide	83.71
smart00223	79	APPLE APPLE domain. Four-fold repeat in plasma kal	83.22
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	81.4
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	80.26

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.95  E-value=1.4e-29  Score=217.12  Aligned_cols=109  Identities=51%  Similarity=0.801  Sum_probs=80.9

Q ss_pred             CCeEEEEecCCCCCCC--CcceEEEecCC-eEEEcCCCcEEEee-cCCCCC-CCcEEEEecCCCEEEEcCCCCceeeeec
Q 008046           64 PRTVAWVANRETPLTD--QSGLLNVTSKG-IVLLDGRDRIFWSS-NTSITM-KNPVVQLMDSGNLVLTDGNYNSLLWQSF  138 (579)
Q Consensus        64 ~~tvVW~Anr~~p~~~--~~~~l~~~~~G-L~l~~~~~~~~Wst-~~~~~~-~~~~a~lldsGNlVL~~~~~~~~lWQSF  138 (579)
                      ++||||+|||+.|+..  ...+|.++.|| |+|.|+.+..+|++ ++.+.. .+..|+|+|+|||||+|. .+.+|||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~-~~~~lW~Sf   79 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS-SGNVLWQSF   79 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET-TSEEEEEST
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee-cceEEEeec
Confidence            4799999999999964  34789999999 99999999999999 655333 578999999999999995 678999999


Q ss_pred             cCCCCccCCCCeecccccCCCceEEEeccCCCCCC
Q 008046          139 DHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPA  173 (579)
Q Consensus       139 d~PTDTlLpgq~l~~~~~tg~~~~L~S~~s~~dps  173 (579)
                      ||||||+||+|+|+.+..++.+..++||++.+|||
T Consensus        80 ~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   80 DYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             TSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999999988887777899999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.94  E-value=1e-25  Score=194.97  Aligned_cols=114  Identities=47%  Similarity=0.755  Sum_probs=100.0

Q ss_pred             CccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEEEe
Q 008046           25 QSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWS  103 (579)
Q Consensus        25 ~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Ws  103 (579)
                      ++|.+|++|+|+++.|++|||.+......+.+|||.+.+ +++||.||++.|. ...+.|.|+.+| |+|.|.+|.++|+
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~~-~~~~~l~l~~dGnLvl~~~~g~~vW~   79 (116)
T cd00028           2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPS-GSSCTLTLQSDGNLVIYDGSGTVVWS   79 (116)
T ss_pred             cCcCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCCC-CCCEEEEEecCCCeEEEcCCCcEEEE
Confidence            568899999999999999999987543378999998877 8899999999984 456789999999 9999999999999


Q ss_pred             ecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCC
Q 008046          104 SNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHP  141 (579)
Q Consensus       104 t~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~P  141 (579)
                      +++.+......|+|+|+|||||++. .+.++|||||||
T Consensus        80 S~~~~~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~~P  116 (116)
T cd00028          80 SNTTRVNGNYVLVLLDDGNLVLYDS-DGNFLWQSFDYP  116 (116)
T ss_pred             ecccCCCCceEEEEeCCCCEEEECC-CCCEEEcCCCCC
Confidence            9986434567899999999999997 478999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.93  E-value=5.8e-26  Score=194.34  Aligned_cols=109  Identities=40%  Similarity=0.920  Sum_probs=102.6

Q ss_pred             eecCCCCCCccccCCCCCCCCcceeeEEEEcCCeEEEEEEeCCC-ceEEEEECCCCcEEEEEEeCCCCcEEEEEeecCCC
Q 008046          199 YRAGSWNGLGFTGTPPLKENVPLCDYKFVINENEVYYECDAKGP-AVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPLDR  277 (579)
Q Consensus       199 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~l~~~G~l~~~~~~~~~~~w~~~~~~~~~~  277 (579)
                      ||+|+|+|..|+++|++. ....+.+.|+.+++|.+++|...+. .++|++||.+|++++|.|.+..+.|...|.+|.|.
T Consensus         1 wrsG~WnG~~f~g~p~~~-~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d~   79 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMS-SNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKDQ   79 (110)
T ss_pred             CCccccCCeEECCccccc-ccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEecccC
Confidence            899999999999999998 6677889999999999999998877 89999999999999999999999999999999999


Q ss_pred             CccccccCCCccccCCCCCCCCCCCCCccCC
Q 008046          278 CDLYSVCGANARCTTNSSRRCDCLEGFVPKS  308 (579)
Q Consensus       278 C~~~~~CG~~g~C~~~~~~~C~C~~Gf~~~~  308 (579)
                      |++|+.||+||+|+.+..+.|+|++||+|++
T Consensus        80 Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   80 CDVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             CCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            9999999999999888888999999999864

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.91  E-value=4e-24  Score=184.48  Aligned_cols=112  Identities=49%  Similarity=0.782  Sum_probs=98.5

Q ss_pred             CccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEEEe
Q 008046           25 QSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWS  103 (579)
Q Consensus        25 ~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Ws  103 (579)
                      +.|..++.|+|+++.|++|||.+.. ...+.+|||.+.+ +++||+|||+.|+... ..|.++++| |+|.|.+|.++|+
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~-q~dgnlV~~~~~~-~~~vW~snt~~~~~~~-~~l~l~~dGnLvl~~~~g~~vW~   78 (114)
T smart00108        2 NTLSSGQTLVSGNSLFELGFFTLIM-QNDYNLILYKSSS-RTVVWVANRDNPVSDS-CTLTLQSDGNLVLYDGDGRVVWS   78 (114)
T ss_pred             cccCCCCEEecCCCcEeeeccccCC-CCCEEEEEEECCC-CcEEEECCCCCCCCCC-EEEEEeCCCCEEEEeCCCCEEEE
Confidence            4688899999999999999999865 3578899999877 8899999999998754 789999999 9999999999999


Q ss_pred             ecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccC
Q 008046          104 SNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDH  140 (579)
Q Consensus       104 t~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~  140 (579)
                      +++..+.....++|+|+|||||++. .+.++||||||
T Consensus        79 S~t~~~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~~  114 (114)
T smart00108       79 SNTTGANGNYVLVLLDDGNLVIYDS-DGNFLWQSFDY  114 (114)
T ss_pred             ecccCCCCceEEEEeCCCCEEEECC-CCCEEeCCCCC
Confidence            9986335567899999999999986 46799999997

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2.6e-21  Score=200.03  Aligned_cols=119  Identities=48%  Similarity=0.815  Sum_probs=106.9

Q ss_pred             cccccCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       459 ~~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      ....|++.+|..||++|+..+.||+|+||.||+|.+.++..||||++.....+..++|.+|+.++.+++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45679999999999999999999999999999999999999999998765433156799999999999999999999999


Q ss_pred             EECC-eEEEEEeccCCCCHHHHhcCCCCCCcccCcccccccC
Q 008046          539 IQAD-ESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHIS  579 (579)
Q Consensus       539 ~~~~-~~~lV~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~~is  579 (579)
                      .+.+ +++||||||+||+|+++|+.....  .++|.+|++|.
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa  180 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIA  180 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHH
Confidence            9998 599999999999999999986544  67999999883

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.56  E-value=1.7e-15  Score=160.91  Aligned_cols=99  Identities=29%  Similarity=0.463  Sum_probs=83.4

Q ss_pred             cccccceecccCceeEEEEEecC----CcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .....++||.|.||.|++|.++.    ...||||.|+.. .+....+|+.|+.||++++||||++|.|+.....+.+||.
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            34566789999999999999854    347999999976 3445679999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCCCcccCcccc
Q 008046          549 EYMPNKSLDFFIFDIDWNGLMLTRSSK  575 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~~~~~~l~~~~r  575 (579)
                      |||+||+|+.||+..+-   .+++.+-
T Consensus       710 EyMENGsLDsFLR~~DG---qftviQL  733 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDG---QFTVIQL  733 (996)
T ss_pred             hhhhCCcHHHHHhhcCC---ceEeehH
Confidence            99999999999986542   1555443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.53  E-value=7.2e-15  Score=158.87  Aligned_cols=91  Identities=34%  Similarity=0.598  Sum_probs=79.5

Q ss_pred             ccccccceecccCceeEEEEEecC------CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      .+....++||+|+||+||+|....      ...||||.|++.... ..++|.+|+++|+.++|+|||+|+|+|.++++++
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            344555799999999999998532      457999999976544 6789999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|+|||.+|||.+||.-.
T Consensus       566 MvFEYm~~GDL~eFLra~  583 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRAR  583 (774)
T ss_pred             EEEEecccccHHHHHHhh
Confidence            999999999999999743

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.52  E-value=3.1e-14  Score=141.88  Aligned_cols=91  Identities=30%  Similarity=0.521  Sum_probs=80.9

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .+|...++||+|+|+.||+|+++. +..||||.+...  .....+.+..|++++++++|||||+|+.++..++..+||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            456666789999999999999865 789999999755  44556778999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      ||.+|+|.+||+..
T Consensus        90 yC~gGDLs~yi~~~  103 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRR  103 (429)
T ss_pred             eCCCCCHHHHHHHc
Confidence            99999999999753

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.46  E-value=4.6e-14  Score=108.36  Aligned_cols=66  Identities=52%  Similarity=1.111  Sum_probs=56.6

Q ss_pred             ccCCCccceeeeccCCCCcccccccccChHHHHHHhhcCcceeeeecCcCccCCcceeecccccCCc
Q 008046          324 CRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDM  390 (579)
Q Consensus       324 C~~~~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~~l~~~  390 (579)
                      |+.+|+|.++.++++|+.+...+..+.++++|++.|++||+|+||+|.+.. ++++|.+|.++|+|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            556789999999999998776655668999999999999999999997654 567899999998864

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.45  E-value=2.6e-13  Score=140.13  Aligned_cols=96  Identities=31%  Similarity=0.579  Sum_probs=83.1

Q ss_pred             ccccCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEE
Q 008046          460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI  539 (579)
Q Consensus       460 ~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~  539 (579)
                      .+.+..+++...       ++||+|.||.|+.|.+.....||+|.++.. ....+.|.+|+.+|.+++|+|||+++|+|.
T Consensus       200 ~wei~r~~l~l~-------~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  200 PWEIPREELKLI-------RELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCT  271 (468)
T ss_pred             CeeecHHHHHHH-------HHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence            344555555443       689999999999999977779999999865 344579999999999999999999999999


Q ss_pred             ECCeEEEEEeccCCCCHHHHhcCC
Q 008046          540 QADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       540 ~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      .+++.+||+|||++|+|.+||.+.
T Consensus       272 ~~~piyIVtE~m~~GsLl~yLr~~  295 (468)
T KOG0197|consen  272 KQEPIYIVTEYMPKGSLLDYLRTR  295 (468)
T ss_pred             cCCceEEEEEecccCcHHHHhhhc
Confidence            999999999999999999999873

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.41  E-value=4.8e-13  Score=137.82  Aligned_cols=98  Identities=32%  Similarity=0.549  Sum_probs=81.5

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCceeceeEEEEECC-eEEEEEeccCCCC
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ--GMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-ESMLIYEYMPNKS  555 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-~~~lV~Ey~~~Gs  555 (579)
                      +.||+|+||+||+|.+.....||||.+......  ..++|.+|+.+|.+++|||||+++|+|.++. ...||+|||++|+
T Consensus        47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs  126 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS  126 (362)
T ss_pred             hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence            469999999999999855444999999754322  2569999999999999999999999999887 7999999999999


Q ss_pred             HHHHhcCCCCCCcccCccccccc
Q 008046          556 LDFFIFDIDWNGLMLTRSSKSHI  578 (579)
Q Consensus       556 L~~~l~~~~~~~~~l~~~~r~~i  578 (579)
                      |.++|+..  +...+++..+++|
T Consensus       127 L~~~l~~~--~~~~l~~~~~l~~  147 (362)
T KOG0192|consen  127 LSVLLHKK--RKRKLPLKVRLRI  147 (362)
T ss_pred             HHHHHhhc--ccCCCCHHHHHHH
Confidence            99999875  3345777666554

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.40  E-value=6.3e-13  Score=139.23  Aligned_cols=93  Identities=30%  Similarity=0.466  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEecCC-----cEEEEEEecC---CCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEG-----QEIAVKRLSK---GSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g-----~~vAvK~l~~---~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      ++....++||+|+||.||+|.+...     ..||||..+.   ......++|++|+++|++++|+|||+++|++....+.
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL  236 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence            3444457999999999999997542     2389999885   2345678999999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCCCC
Q 008046          545 MLIYEYMPNKSLDFFIFDIDW  565 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~~~  565 (579)
                      +||||+|++|+|.++|.....
T Consensus       237 ~ivmEl~~gGsL~~~L~k~~~  257 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKKNKK  257 (474)
T ss_pred             EEEEEecCCCcHHHHHHhCCC
Confidence            999999999999999976443

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.38  E-value=3.3e-13  Score=139.51  Aligned_cols=89  Identities=35%  Similarity=0.574  Sum_probs=80.3

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCccc-HHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ....++||+|.||.|.......+..||||.++...... ..+|..|+++|.+++|||||+|+|+|..+++.++|+|||++
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn  619 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN  619 (807)
T ss_pred             eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence            44457999999999999999888999999998764444 57999999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |+|.+||...
T Consensus       620 GDLnqFl~ah  629 (807)
T KOG1094|consen  620 GDLNQFLSAH  629 (807)
T ss_pred             CcHHHHHHhc
Confidence            9999999754

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.36  E-value=1.2e-12  Score=146.74  Aligned_cols=92  Identities=34%  Similarity=0.657  Sum_probs=80.2

Q ss_pred             ccccccceecccCceeEEEEEecC--Cc----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE--GQ----EIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~--g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      .+....+.||+|+||.||+|.+.+  +.    .||||.+++. +.+...+|++|+.+|++++|||||+++|.|......+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            344556789999999999999765  32    4999999866 4566789999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCC
Q 008046          546 LIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~~  564 (579)
                      |++|||++|+|..||++.+
T Consensus       772 i~leyM~gGDL~sflr~~r  790 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESR  790 (1025)
T ss_pred             EEehhcccCcHHHHHHhcc
Confidence            9999999999999998764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.31  E-value=4.9e-12  Score=149.29  Aligned_cols=86  Identities=29%  Similarity=0.481  Sum_probs=73.1

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ..+...+.||+|+||.||+|.. .++..||||+++.....    ...|++++++++|||||+++|+|...+..++|||||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            4566778999999999999997 46889999998754322    234688899999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus       766 ~~g~L~~~l~~  776 (968)
T PLN00113        766 EGKNLSEVLRN  776 (968)
T ss_pred             CCCcHHHHHhc
Confidence            99999999953

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.29  E-value=1.5e-12  Score=135.12  Aligned_cols=90  Identities=31%  Similarity=0.541  Sum_probs=80.0

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ..-.++||-|.||.||.|+++. ...||||.|+... -..++|+.|+.+|+.|+|||||+|+|+|....+.|||.|||.+
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY  347 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence            3444799999999999999876 7789999998653 4578999999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCC
Q 008046          554 KSLDFFIFDIDW  565 (579)
Q Consensus       554 GsL~~~l~~~~~  565 (579)
                      |+|.+||+..++
T Consensus       348 GNLLdYLRecnr  359 (1157)
T KOG4278|consen  348 GNLLDYLRECNR  359 (1157)
T ss_pred             ccHHHHHHHhch
Confidence            999999986544

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.24  E-value=2.8e-12  Score=130.07  Aligned_cols=94  Identities=26%  Similarity=0.425  Sum_probs=76.2

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCceeceeEEEEECC----eEEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR--LQHRNLVKLLGCCIQAD----ESMLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~nlv~l~g~~~~~~----~~~lV~  548 (579)
                      ....+.+|+|.||.||||.+.+ +.||||.+.   .+..+.|.+|-.|..-  ++|+||++++++-..+.    +.+||+
T Consensus       212 l~l~eli~~Grfg~V~KaqL~~-~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLDN-RLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             hhhHHHhhcCccceeehhhccC-ceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            3444689999999999999954 899999986   4556789999888765  58999999999987765    789999


Q ss_pred             eccCCCCHHHHhcCCCCCCcccCcccccc
Q 008046          549 EYMPNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      ||.++|||.+||...     +.+|..-.+
T Consensus       288 ~fh~kGsL~dyL~~n-----tisw~~~cr  311 (534)
T KOG3653|consen  288 EFHPKGSLCDYLKAN-----TISWNSLCR  311 (534)
T ss_pred             eeccCCcHHHHHHhc-----cccHHHHHH
Confidence            999999999999643     345554433

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.22  E-value=1.2e-12  Score=140.10  Aligned_cols=88  Identities=34%  Similarity=0.505  Sum_probs=74.7

Q ss_pred             cccceecccCceeEEEEEe-cCC----cEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          476 ASYNKLGEGGFGPVYKGTL-VEG----QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~-~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +..++||+|+||+||||.+ ++|    -+||+|++... ..+..++|+.|+-+|.+++|+||+||+|+|.... +.||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            3447999999999999985 443    36999999755 3455789999999999999999999999997765 889999


Q ss_pred             ccCCCCHHHHhcCCC
Q 008046          550 YMPNKSLDFFIFDID  564 (579)
Q Consensus       550 y~~~GsL~~~l~~~~  564 (579)
                      |||.|+|.+|++..+
T Consensus       778 ~mP~G~LlDyvr~hr  792 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHR  792 (1177)
T ss_pred             hcccchHHHHHHHhh
Confidence            999999999997644

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=3.3e-11  Score=120.47  Aligned_cols=90  Identities=24%  Similarity=0.411  Sum_probs=75.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      +.|...+.||+|+||.|-++.-+ .|+.||||.+++...       .......+|+++|.+++|||||++.+++...+..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            34556689999999999999864 499999999975411       1122357999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      |||+|||++|+|.+++-.
T Consensus       252 YmVlE~v~GGeLfd~vv~  269 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVA  269 (475)
T ss_pred             EEEEEEecCccHHHHHHh
Confidence            999999999999999864

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.16  E-value=5.6e-11  Score=119.89  Aligned_cols=86  Identities=22%  Similarity=0.433  Sum_probs=71.9

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCceeceeEEEEECC----eEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR--LQHRNLVKLLGCCIQAD----ESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~nlv~l~g~~~~~~----~~~l  546 (579)
                      ......+.||+|.||.||+|.+ .|+.||||.+..   .+++.+.+|.++...  ++|+||+.+++.-..+.    +++|
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             heeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            3456678899999999999998 578999999863   345688889888775  59999999998765543    6899


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |.||.++|||.+||..
T Consensus       287 vTdYHe~GSL~DyL~r  302 (513)
T KOG2052|consen  287 VTDYHEHGSLYDYLNR  302 (513)
T ss_pred             eeecccCCcHHHHHhh
Confidence            9999999999999964

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.15  E-value=5.4e-11  Score=96.56  Aligned_cols=80  Identities=46%  Similarity=0.950  Sum_probs=63.2

Q ss_pred             cccccCC---CccceeeeccCCCCcccccccccChHHHHHHhhcCcceeeeecCcCccCCcceeecccccCCceeccCCC
Q 008046          321 ELKCRNG---DEFPKYVKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGG  397 (579)
Q Consensus       321 ~~~C~~~---~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~~l~~~~~~~~~~  397 (579)
                      +++|...   +.|..+.++++|+.....  ...++++|+++|++||+|.||+|.+   ++++|.+|..++.+.+.....+
T Consensus         2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~~~~   76 (84)
T cd01098           2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLSSGG   76 (84)
T ss_pred             CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeecCCC
Confidence            3467543   688999999999875543  5679999999999999999999974   2568999999888876555456


Q ss_pred             cceeeeec
Q 008046          398 QDLYIRIA  405 (579)
Q Consensus       398 ~~~ylrv~  405 (579)
                      ..+|+|++
T Consensus        77 ~~~yiKv~   84 (84)
T cd01098          77 GTLYLRLA   84 (84)
T ss_pred             cEEEEEeC
Confidence            78999874

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=8.2e-11  Score=120.46  Aligned_cols=89  Identities=28%  Similarity=0.463  Sum_probs=73.9

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV  547 (579)
                      +.|...++||+|.||.|||++. ..|..||+|++....  +....-..+||.||++++||||++|.+.....  ...|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            3455567999999999999985 559999999997543  33455678999999999999999999998876  689999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +|||++ +|.-++..
T Consensus       197 FeYMdh-DL~GLl~~  210 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSS  210 (560)
T ss_pred             Eecccc-hhhhhhcC
Confidence            999987 78777754

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.12  E-value=6.3e-11  Score=93.97  Aligned_cols=71  Identities=24%  Similarity=0.431  Sum_probs=60.0

Q ss_pred             ccCCCccceeeeccCCCCcccccccccChHHHHHHhhc---CcceeeeecCcCccCCcceeeccccc-CCceeccCCCcc
Q 008046          324 CRNGDEFPKYVKLKLPDTSSSWFNASMNLKECSELCSK---NCSCTAYANSDVERGGSGCLLWFGDL-MDMKEYNDGGQD  399 (579)
Q Consensus       324 C~~~~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~---nCsC~a~~~~~~~~~~~~C~~~~~~l-~~~~~~~~~~~~  399 (579)
                      |.....|..+.++++|+...      .+.++|++.|++   ||+|.||+|.+.   +.+|.+|.+++ .+.+.+.+.+.+
T Consensus         5 ~~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~~~~~g~~   75 (80)
T cd00129           5 CKSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRKEFSHGFD   75 (80)
T ss_pred             eecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHhccCCCce
Confidence            44557788889999998744      589999999999   999999999752   35899999999 998887777889


Q ss_pred             eeee
Q 008046          400 LYIR  403 (579)
Q Consensus       400 ~ylr  403 (579)
                      +|+|
T Consensus        76 Ly~r   79 (80)
T cd00129          76 LYEN   79 (80)
T ss_pred             eEeE
Confidence            9987

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=2.2e-10  Score=120.03  Aligned_cols=89  Identities=24%  Similarity=0.350  Sum_probs=79.8

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ..|...+.||+|+|+.+|+++. ..|..+|+|++.+.   .....+...+|+++.++++|||||+++++++..++.|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4577778999999999999997 67999999999753   3344568899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhc
Q 008046          549 EYMPNKSLDFFIF  561 (579)
Q Consensus       549 Ey~~~GsL~~~l~  561 (579)
                      |++++|+|..++.
T Consensus        98 ELC~~~sL~el~K  110 (592)
T KOG0575|consen   98 ELCHRGSLMELLK  110 (592)
T ss_pred             EecCCccHHHHHH
Confidence            9999999999986

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.09  E-value=4.1e-11  Score=111.83  Aligned_cols=91  Identities=29%  Similarity=0.406  Sum_probs=79.7

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...+.||+|.||.||.+..+. +-.||+|++.+.   ..+-.+++.+|++|-..++||||++++|++......||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            3567778899999999999999765 678999999754   223456899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||.++|+|...|.+
T Consensus       101 lEya~~gel~k~L~~  115 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQE  115 (281)
T ss_pred             EEecCCchHHHHHHh
Confidence            999999999999984

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.09  E-value=4.4e-10  Score=111.51  Aligned_cols=93  Identities=23%  Similarity=0.299  Sum_probs=79.5

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEE
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ  540 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~  540 (579)
                      ++..+|++.       +.||+|..|.|||+.++. +..+|+|.+... .+...++..+|++++++.+||+||+++|++..
T Consensus        76 i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~  148 (364)
T KOG0581|consen   76 ISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS  148 (364)
T ss_pred             cCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence            455565543       689999999999999865 788999999644 33446789999999999999999999999998


Q ss_pred             CC-eEEEEEeccCCCCHHHHhcC
Q 008046          541 AD-ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~~-~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .. +..|+||||.+|||++++..
T Consensus       149 ~~~~isI~mEYMDgGSLd~~~k~  171 (364)
T KOG0581|consen  149 NGEEISICMEYMDGGSLDDILKR  171 (364)
T ss_pred             CCceEEeehhhcCCCCHHHHHhh
Confidence            88 59999999999999999874

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.08  E-value=1.8e-10  Score=114.55  Aligned_cols=98  Identities=36%  Similarity=0.615  Sum_probs=77.2

Q ss_pred             cceecccCceeEEEEEec-----CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          478 YNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .+.||.|.||.||+|.+.     .+..|+||.++... ....++|.+|++.+.+++||||++++|+|...++.++|+||+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            468999999999999987     25679999996542 334689999999999999999999999999888899999999


Q ss_pred             CCCCHHHHhcCCCCCCcccCcccccc
Q 008046          552 PNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       552 ~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      ++|+|.++|.....  .-+++..+..
T Consensus        84 ~~g~L~~~L~~~~~--~~~~~~~~~~  107 (259)
T PF07714_consen   84 PGGSLDDYLKSKNK--EPLSEQQRLS  107 (259)
T ss_dssp             TTEBHHHHHHHTCT--TTSBHHHHHH
T ss_pred             cccccccccccccc--cccccccccc
Confidence            99999999986521  2344544443

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.08  E-value=2.2e-10  Score=118.36  Aligned_cols=92  Identities=25%  Similarity=0.398  Sum_probs=81.1

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ..++|....+||+|+||.||.++-++ |..+|+|+|++.   .....+..++|-.+|....+++||+|+-.+...+++||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            34678888999999999999998655 999999999865   23446678999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+|+|++..+|..
T Consensus       219 iMEylPGGD~mTLL~~  234 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMR  234 (550)
T ss_pred             EEEecCCccHHHHHHh
Confidence            9999999999999964

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.07  E-value=3.5e-10  Score=112.81  Aligned_cols=90  Identities=28%  Similarity=0.498  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEec----CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||+|.+.    .+..||+|.++... ....+.|.+|+.++.+++|||++++++++..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            35666789999999999999863    25689999997543 23346799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++|+|.+++..
T Consensus        85 ~e~~~~~~L~~~l~~   99 (266)
T cd05064          85 TEYMSNGALDSFLRK   99 (266)
T ss_pred             EEeCCCCcHHHHHHh
Confidence            999999999999965

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.05  E-value=6.8e-10  Score=110.69  Aligned_cols=95  Identities=24%  Similarity=0.363  Sum_probs=83.4

Q ss_pred             HHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++.+++++.....||+|+||.||++...+ +..||+|.+........+.+.+|+.++.+++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            45567777777899999999999999654 77899999876655566789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++++|.+++..
T Consensus        83 v~e~~~~~~L~~~l~~   98 (268)
T cd06624          83 FMEQVPGGSLSALLRS   98 (268)
T ss_pred             EEecCCCCCHHHHHHH
Confidence            9999999999999975

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.05  E-value=1.7e-10  Score=120.44  Aligned_cols=91  Identities=26%  Similarity=0.517  Sum_probs=76.9

Q ss_pred             cccccceecccCceeEEEEEecC---C--cEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE---G--QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~---g--~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .....+.||+|.||.||+|++.+   |  -.||||..+.. .++..+.|++|+.+|++++|||||+|+|.|.+ .+.+||
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wiv  468 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIV  468 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEE
Confidence            34555789999999999999754   2  25999999864 55668899999999999999999999999975 578999


Q ss_pred             EeccCCCCHHHHhcCCCC
Q 008046          548 YEYMPNKSLDFFIFDIDW  565 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~~~  565 (579)
                      ||.++.|.|..||...+.
T Consensus       469 mEL~~~GELr~yLq~nk~  486 (974)
T KOG4257|consen  469 MELAPLGELREYLQQNKD  486 (974)
T ss_pred             EecccchhHHHHHHhccc
Confidence            999999999999976443

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.05  E-value=5.8e-10  Score=118.07  Aligned_cols=91  Identities=29%  Similarity=0.449  Sum_probs=77.0

Q ss_pred             cccccccceecccCceeEEEEEecC------CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCceeceeEEEEECCe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADE  543 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~  543 (579)
                      .+.|...+.||+|+||.||+|....      +..||||+++.... ...+.|.+|+.++.++. |||||+++++|.....
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            4567777899999999999998521      34699999975432 33467999999999996 9999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .+|||||+++|+|.++|..
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             eEEEEEecCCCcHHHHHHH
Confidence            9999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PHA02988 hypothetical protein; Provisional

Probab=99.04  E-value=1.7e-09  Score=109.16  Aligned_cols=98  Identities=20%  Similarity=0.290  Sum_probs=78.6

Q ss_pred             ccccCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCccc---HHHHHHHHHHHhcCCCCceeceeE
Q 008046          460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQG---MEEFKNEVTLIARLQHRNLVKLLG  536 (579)
Q Consensus       460 ~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~nlv~l~g  536 (579)
                      ...++++++...     ....|++|++|.||+|.+ +++.||||+++......   .+.|.+|+.+|.+++|||||+++|
T Consensus        12 ~~~i~~~~i~~~-----~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         12 IKCIESDDIDKY-----TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             ceecCHHHcCCC-----CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            444566666332     225789999999999998 68899999997543322   467889999999999999999999


Q ss_pred             EEEE----CCeEEEEEeccCCCCHHHHhcCC
Q 008046          537 CCIQ----ADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       537 ~~~~----~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++..    ....++|+||+++|+|.+++...
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  116 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKE  116 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhhC
Confidence            9876    34688999999999999999753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.03  E-value=4e-10  Score=118.45  Aligned_cols=91  Identities=29%  Similarity=0.417  Sum_probs=76.9

Q ss_pred             ccccccceecccCceeEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++..      ..+..||||+++... ....+.+.+|+.++..+ +||||++++++|..++..
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            4566678999999999999973      225689999997442 23456789999999999 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++||||+++|+|.+++...
T Consensus       115 ~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104         115 LVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             eeeehhccCCcHHHHHHhc
Confidence            9999999999999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.02  E-value=1.1e-09  Score=115.41  Aligned_cols=89  Identities=24%  Similarity=0.359  Sum_probs=77.1

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .|...+.||+|+||.||++.... ++.+|+|++...   .....+.+.+|+.++.+++|+||+++++++...+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            46667899999999999998654 789999999643   22335678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (381)
T cd05626          82 YIPGGDMMSLLIR   94 (381)
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.02  E-value=2.1e-10  Score=118.76  Aligned_cols=90  Identities=27%  Similarity=0.464  Sum_probs=77.5

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...+.||+|+||.||||+-+. .+.||+|.+.+.  ...+.+...+|++++++++|||||.++..++...++++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            355666799999999999999654 788999999754  33456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+.+ +|..+|.+.
T Consensus        82 ~a~g-~L~~il~~d   94 (808)
T KOG0597|consen   82 YAVG-DLFTILEQD   94 (808)
T ss_pred             hhhh-hHHHHHHhc
Confidence            9965 999999753

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.01  E-value=1.5e-09  Score=110.61  Aligned_cols=90  Identities=34%  Similarity=0.574  Sum_probs=75.7

Q ss_pred             ccccccceecccCceeEEEEEecC-----------------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceece
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-----------------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKL  534 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l  534 (579)
                      ++|...++||+|+||.||++...+                 +..||+|.+.... .....+|.+|+.++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            345666799999999999997532                 3369999987542 2335689999999999999999999


Q ss_pred             eEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          535 LGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       535 ~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++++...+..++|+||+++|+|.+++..
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSS  112 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            9999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.00  E-value=6.6e-10  Score=105.39  Aligned_cols=89  Identities=30%  Similarity=0.618  Sum_probs=74.9

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCcc-c-HHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ-G-MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~-~-~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .|...++||+|.||.||+|... .|+.||||+++..... + ...-++|++.++.++|+||+.|+.++...+...||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            3445578999999999999954 4899999999855322 2 34778999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      |+ -+|+..|.+.
T Consensus        83 m~-tdLe~vIkd~   94 (318)
T KOG0659|consen   83 MP-TDLEVVIKDK   94 (318)
T ss_pred             cc-ccHHHHhccc
Confidence            97 4899888764

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.99  E-value=8.3e-10  Score=110.72  Aligned_cols=83  Identities=22%  Similarity=0.428  Sum_probs=70.7

Q ss_pred             eecccCceeEEEEEecC-------------------------CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceece
Q 008046          480 KLGEGGFGPVYKGTLVE-------------------------GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKL  534 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~-------------------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l  534 (579)
                      .||+|+||.||+|.+..                         ...|++|.+.........+|..|+.++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999999997521                         13589999875444445689999999999999999999


Q ss_pred             eEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          535 LGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       535 ~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +++|......++||||+++|+|..++..
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~  109 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK  109 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence            9999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.98  E-value=9.5e-10  Score=109.11  Aligned_cols=92  Identities=23%  Similarity=0.421  Sum_probs=80.6

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...++||+|+||+||..+..+ ++..|+|++++.   ...+.+...+|..++.+++||.||+|+-.+...+.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            3578888999999999999998765 889999999865   223456789999999999999999999989999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+.||.|..+|..+
T Consensus       104 ld~~~GGeLf~hL~~e  119 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQRE  119 (357)
T ss_pred             EeccCCccHHHHHHhc
Confidence            9999999999999643

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=2.3e-11  Score=115.84  Aligned_cols=92  Identities=26%  Similarity=0.512  Sum_probs=76.1

Q ss_pred             cccccceecccCceeEEEEE-ecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeE-EEEECCe-EEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLG-CCIQADE-SMLIY  548 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g-~~~~~~~-~~lV~  548 (579)
                      +|...++||+|.||.|||+. +.+|..+|.|.++-.  ..+..+....|+.++++++|||||+.++ -+.+..+ ++|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            45556799999999999998 567899999999733  4455678999999999999999999998 4555555 89999


Q ss_pred             eccCCCCHHHHhcCCCC
Q 008046          549 EYMPNKSLDFFIFDIDW  565 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~~  565 (579)
                      ||+..|+|...|..-++
T Consensus       100 E~c~~GDLsqmIk~~K~  116 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKK  116 (375)
T ss_pred             HhhcccCHHHHHHHHHh
Confidence            99999999999864333

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.98  E-value=1.5e-09  Score=107.35  Aligned_cols=88  Identities=28%  Similarity=0.521  Sum_probs=77.2

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      .|...+.||+|+||.||++...++..+|+|.+... ....+.|..|+.++.+++|||++++++++...+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~   83 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN   83 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence            45566789999999999999877788999988643 23356899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        84 ~~L~~~~~~   92 (256)
T cd05114          84 GCLLNYLRQ   92 (256)
T ss_pred             CcHHHHHHh
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.98  E-value=2.4e-09  Score=110.63  Aligned_cols=90  Identities=22%  Similarity=0.261  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++.... +..+|+|.+.... ....+.+.+|++++.+++|+||+++++++...++.++||||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            567777899999999999999764 7789999887542 23346799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        85 ~~~~~L~~~l~~   96 (333)
T cd06650          85 MDGGSLDQVLKK   96 (333)
T ss_pred             CCCCcHHHHHHH
Confidence            999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.97  E-value=1.3e-09  Score=115.25  Aligned_cols=91  Identities=29%  Similarity=0.449  Sum_probs=76.4

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~  544 (579)
                      +++...++||+|+||.||++...      .+..||+|+++.... ...+.+.+|+.++.++. |+|||+++++|......
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~  116 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI  116 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence            44556689999999999999853      245799999975422 23457999999999997 99999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++|+|.++|+..
T Consensus       117 ~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         117 YIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             EEEEeccCCCcHHHHHHhc
Confidence            9999999999999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.97  E-value=9.2e-10  Score=113.88  Aligned_cols=91  Identities=27%  Similarity=0.487  Sum_probs=74.8

Q ss_pred             cccccccceecccCceeEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC-C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA-D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~-~  542 (579)
                      .++|...++||+|+||.||++..      ..++.||||+++... ....+.+.+|+.++.++ +||||++++++|... .
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            35677778999999999999974      124679999997542 23346799999999999 899999999998764 4


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..++||||+++|+|.++|..
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHh
Confidence            57899999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.97  E-value=8.5e-10  Score=109.42  Aligned_cols=92  Identities=29%  Similarity=0.488  Sum_probs=81.6

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ..+|...++||+|+||.||++...++..+|+|.+..........+..|+.++..++|+|++++++++...+..++|+||+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            34566668999999999999998888899999998655445678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++|+|.+++.+.
T Consensus        85 ~~~~L~~~~~~~   96 (261)
T cd05148          85 EKGSLLAFLRSP   96 (261)
T ss_pred             ccCCHHHHHhcC
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=1.5e-09  Score=113.53  Aligned_cols=89  Identities=25%  Similarity=0.384  Sum_probs=77.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++... .++.||||++...   .......+.+|+.++..++|+||+++++.+..+...++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            5777789999999999999975 4889999999743   12334568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~~g~L~~~l~~   94 (364)
T cd05599          82 YLPGGDMMTLLMK   94 (364)
T ss_pred             CCCCcHHHHHHHH
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=2e-09  Score=113.33  Aligned_cols=89  Identities=25%  Similarity=0.337  Sum_probs=76.7

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...++||+|+||.||++... .++.||+|++...   .....+.+.+|+.++.+++|+||+++++++......+||||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            5666789999999999999864 4889999998643   12334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (377)
T cd05629          82 FLPGGDLMTMLIK   94 (377)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.97  E-value=3.8e-10  Score=112.34  Aligned_cols=88  Identities=22%  Similarity=0.450  Sum_probs=76.6

Q ss_pred             ccccceecccCceeEEEEEe-cCCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|.||+|-++.- ..|+.||||.+++..   .++.-...+|++||..++||||+.++.++...+...|||||
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY  134 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY  134 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence            44446899999999999984 669999999998653   34445678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ..+|.|.+|+..
T Consensus       135 aS~GeLYDYiSe  146 (668)
T KOG0611|consen  135 ASGGELYDYISE  146 (668)
T ss_pred             cCCccHHHHHHH
Confidence            999999999964

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.96  E-value=5.2e-10  Score=116.98  Aligned_cols=97  Identities=27%  Similarity=0.532  Sum_probs=81.0

Q ss_pred             cccccCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeE
Q 008046          459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLG  536 (579)
Q Consensus       459 ~~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g  536 (579)
                      +.+.+.++++..       .+.||+|.||+||+|.+.  ..||||+++..  .++..+.|++|+.++++.+|.||+-+.|
T Consensus       385 ~~WeIp~~ev~l-------~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG  455 (678)
T KOG0193|consen  385 EEWEIPPEEVLL-------GERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMG  455 (678)
T ss_pred             cccccCHHHhhc-------cceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeeh
Confidence            345555555544       368999999999999974  47999999855  3456789999999999999999999999


Q ss_pred             EEEECCeEEEEEeccCCCCHHHHhcCCCC
Q 008046          537 CCIQADESMLIYEYMPNKSLDFFIFDIDW  565 (579)
Q Consensus       537 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~  565 (579)
                      +|..+.. .||..++++.+|..+|+..+.
T Consensus       456 ~~~~p~~-AIiTqwCeGsSLY~hlHv~et  483 (678)
T KOG0193|consen  456 ACMNPPL-AIITQWCEGSSLYTHLHVQET  483 (678)
T ss_pred             hhcCCce-eeeehhccCchhhhhccchhh
Confidence            9988777 999999999999999986543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=2.6e-09  Score=110.40  Aligned_cols=89  Identities=24%  Similarity=0.426  Sum_probs=77.5

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.... ++.||+|+++...   ....+.+..|+.++..++|+||+++++.+...+..+||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            46677899999999999999764 8899999997431   2334678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~g~~L~~~l~~   94 (333)
T cd05600          82 YVPGGDFRTLLNN   94 (333)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999999964

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.95  E-value=3.4e-09  Score=109.43  Aligned_cols=90  Identities=22%  Similarity=0.236  Sum_probs=78.4

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++.... +..+|+|.+.... ....+.+.+|++++.+++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            567777899999999999999754 7889999987542 23346799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        85 ~~~~~L~~~l~~   96 (331)
T cd06649          85 MDGGSLDQVLKE   96 (331)
T ss_pred             CCCCcHHHHHHH
Confidence            999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.95  E-value=3.8e-10  Score=108.77  Aligned_cols=87  Identities=25%  Similarity=0.426  Sum_probs=72.2

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCCc-cc-HHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG-QG-MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~-~~-~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |....++|+|+||.|||.+.++ |+.||||++.+... .. .+--++|++++++++|+|||.|+.++.....++||+||+
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~   83 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC   83 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence            3444589999999999999876 99999999975432 22 345689999999999999999999999999999999999


Q ss_pred             CCCCHHHHhc
Q 008046          552 PNKSLDFFIF  561 (579)
Q Consensus       552 ~~GsL~~~l~  561 (579)
                      ++--|+++-.
T Consensus        84 dhTvL~eLe~   93 (396)
T KOG0593|consen   84 DHTVLHELER   93 (396)
T ss_pred             chHHHHHHHh
Confidence            8866665543

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.95  E-value=2.5e-09  Score=112.70  Aligned_cols=89  Identities=22%  Similarity=0.348  Sum_probs=76.8

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .|...++||+|+||.||++... .++.+|+|.+....   ....+.+.+|+.++.+++|+|||++++.+...+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            4667789999999999999864 47889999986431   2334578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (382)
T cd05625          82 YIPGGDMMSLLIR   94 (382)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.95  E-value=2.7e-09  Score=110.12  Aligned_cols=91  Identities=20%  Similarity=0.311  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++||||+++++.+...+..++|+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            456777899999999999999754 789999998643   1233467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus        98 e~~~~~~L~~~l~~~  112 (329)
T PTZ00263         98 EFVVGGELFTHLRKA  112 (329)
T ss_pred             cCCCCChHHHHHHHc
Confidence            999999999998653

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.94  E-value=2.1e-09  Score=106.70  Aligned_cols=91  Identities=26%  Similarity=0.457  Sum_probs=79.7

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .++|...+.||+|++|.||++....++.||+|.++... ...++|.+|+.++++++|+|++++.+++...+..++|+||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            34577778999999999999998777889999987542 34578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        84 ~~~~L~~~~~~~   95 (261)
T cd05068          84 KYGSLLEYLQGG   95 (261)
T ss_pred             cCCcHHHHHhcc
Confidence            999999999653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.94  E-value=5.5e-10  Score=118.15  Aligned_cols=92  Identities=34%  Similarity=0.512  Sum_probs=77.4

Q ss_pred             cccceecccCceeEEEEEecC--Cc--EEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE--GQ--EIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~--g~--~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ...++||+|.||.|++|.++.  |.  .||||.++..... ...+|++|+.+|-+++|+||+||+|.... ....+|+|.
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            344799999999999999754  43  5999999866443 57899999999999999999999999886 778899999


Q ss_pred             cCCCCHHHHhcCCCCCCc
Q 008046          551 MPNKSLDFFIFDIDWNGL  568 (579)
Q Consensus       551 ~~~GsL~~~l~~~~~~~~  568 (579)
                      ++.|||.+.|++..+...
T Consensus       192 aplGSLldrLrka~~~~l  209 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAIL  209 (1039)
T ss_pred             cccchHHHHHhhccccce
Confidence            999999999988443333

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.94  E-value=2.8e-09  Score=106.08  Aligned_cols=91  Identities=31%  Similarity=0.527  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|+..+.||+|+||.||+|....    ...||+|.++... .....+|.+|+.++.+++|+||+++.+.+...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            457777899999999999998743    3579999987543 23356899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++++|.+++...
T Consensus        84 ~e~~~~~~L~~~~~~~   99 (266)
T cd05033          84 TEYMENGSLDKFLREN   99 (266)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999998653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.94  E-value=3.7e-09  Score=105.03  Aligned_cols=91  Identities=26%  Similarity=0.463  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.+|+|.++..   .....+.+.+|++++.+++|+|++++++.+...+..++|+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46777789999999999999986 5889999988632   2233568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus        82 e~~~~~~L~~~l~~~   96 (267)
T cd08224          82 ELADAGDLSRMIKHF   96 (267)
T ss_pred             ecCCCCCHHHHHHHh
Confidence            999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.93  E-value=3.4e-09  Score=111.41  Aligned_cols=89  Identities=22%  Similarity=0.344  Sum_probs=77.0

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...++||+|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++.+++|+||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            46677899999999999998654 8899999986431   2234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.++|..
T Consensus        82 ~~~~g~L~~~i~~   94 (376)
T cd05598          82 YIPGGDMMSLLIR   94 (376)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=1.8e-09  Score=109.27  Aligned_cols=89  Identities=17%  Similarity=0.236  Sum_probs=76.5

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...++||+|+||.||++... .++.+|+|++....   ....+.+.+|+.++.+++||||+++++.+......++|+|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            4666789999999999999975 48899999986431   2234578899999999999999999999998999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~~~~L~~~~~~   94 (291)
T cd05612          82 YVPGGELFSYLRN   94 (291)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.93  E-value=3.7e-09  Score=104.85  Aligned_cols=90  Identities=32%  Similarity=0.502  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...++||+|+||.||++...++..||+|.+... ....+.+.+|+.++.+++|+|++++++.+...+..++|+||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            456777899999999999999888888999998653 2345789999999999999999999999988899999999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +|+|.+++...
T Consensus        85 ~~~L~~~l~~~   95 (261)
T cd05072          85 KGSLLDFLKSD   95 (261)
T ss_pred             CCcHHHHHHHh
Confidence            99999998653

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.93  E-value=6.3e-09  Score=103.61  Aligned_cols=90  Identities=22%  Similarity=0.420  Sum_probs=78.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...++||+|+||.||++... +++.+|+|++..........+.+|+.++.+++|+|++++.+.+...+..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            35666789999999999999964 57889999987554444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        89 ~~~~L~~~~~~   99 (267)
T cd06646          89 GGGSLQDIYHV   99 (267)
T ss_pred             CCCcHHHHHHh
Confidence            99999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.93  E-value=3.8e-09  Score=109.54  Aligned_cols=91  Identities=22%  Similarity=0.333  Sum_probs=77.2

Q ss_pred             ccccccceecccCceeEEEEEecC--CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE--GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~--g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++....  +..||+|++...   .....+.+.+|+.++..++||||+++++++...+..++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            457777899999999999998654  358999998643   223456788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.+++...
T Consensus       110 ~Ey~~~g~L~~~i~~~  125 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN  125 (340)
T ss_pred             EeCCCCCcHHHHHHHc
Confidence            9999999999998643

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.92  E-value=3.7e-09  Score=106.34  Aligned_cols=90  Identities=31%  Similarity=0.578  Sum_probs=75.9

Q ss_pred             ccccccceecccCceeEEEEEec-----CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~  545 (579)
                      ++|...+.||+|+||.||++.+.     .+..||+|.++.......+.|.+|++++.+++|+|++++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            35566679999999999999753     3778999999766555567899999999999999999999987543  4688


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        84 lv~e~~~~~~L~~~l~~  100 (284)
T cd05081          84 LVMEYLPYGSLRDYLQK  100 (284)
T ss_pred             EEEEecCCCCHHHHHHh
Confidence            99999999999999964

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.92  E-value=5.9e-09  Score=106.46  Aligned_cols=89  Identities=21%  Similarity=0.212  Sum_probs=76.9

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|+||.||++... .+..+|+|.++... ....+.+.+|++++.+++|+||+++++.+..++..++|+||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            5677789999999999999865 47789999886442 233457899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~l~~   92 (308)
T cd06615          82 DGGSLDQVLKK   92 (308)
T ss_pred             CCCcHHHHHHh
Confidence            99999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.92  E-value=3.6e-09  Score=106.41  Aligned_cols=83  Identities=28%  Similarity=0.454  Sum_probs=70.8

Q ss_pred             ecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++... +++.+|+|.+....   ....+.+..|+.++.+++|+|++++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999865 48899999986432   12335678999999999999999999999989999999999999999


Q ss_pred             HHHhcCC
Q 008046          557 DFFIFDI  563 (579)
Q Consensus       557 ~~~l~~~  563 (579)
                      ..++...
T Consensus        81 ~~~~~~~   87 (280)
T cd05608          81 RYHIYNV   87 (280)
T ss_pred             HHHHHhc
Confidence            9888643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.91  E-value=3.3e-09  Score=105.11  Aligned_cols=88  Identities=28%  Similarity=0.541  Sum_probs=76.5

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +|...+.||+|+||.||++...++..+|+|.+... ....++|.+|+.++.+++|||++++++++......++|+||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            35556789999999999998877778999998743 23356899999999999999999999999988899999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        84 ~~l~~~i~~   92 (256)
T cd05113          84 GCLLNYLRE   92 (256)
T ss_pred             CcHHHHHHh
Confidence            999999865

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.91  E-value=3.9e-09  Score=103.94  Aligned_cols=83  Identities=31%  Similarity=0.551  Sum_probs=73.8

Q ss_pred             eecccCceeEEEEEecCCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHHH
Q 008046          480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDF  558 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~  558 (579)
                      .||+|+||.||++...++..+|+|.+..... .....|.+|+.++.+++|+|++++++++......++|+||+++|+|.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            6899999999999988888999999875533 234579999999999999999999999999999999999999999999


Q ss_pred             HhcC
Q 008046          559 FIFD  562 (579)
Q Consensus       559 ~l~~  562 (579)
                      ++..
T Consensus        82 ~~~~   85 (250)
T cd05085          82 FLRK   85 (250)
T ss_pred             HHHh
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.91  E-value=4.4e-09  Score=110.07  Aligned_cols=89  Identities=21%  Similarity=0.346  Sum_probs=76.7

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.... ++.+|+|.++...   ......+..|+.++.+++|+||+++++.+......++|||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            56777899999999999998654 8899999996431   2234578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (363)
T cd05628          82 FLPGGDMMTLLMK   94 (363)
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.91  E-value=5.7e-09  Score=105.26  Aligned_cols=88  Identities=30%  Similarity=0.463  Sum_probs=75.3

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++... +++.+|+|.+....   ......+.+|+.++.+++|+|++++.+.+...+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            556679999999999999864 58899999986432   22345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        82 ~~~g~L~~~~~~   93 (285)
T cd05631          82 MNGGDLKFHIYN   93 (285)
T ss_pred             cCCCcHHHHHHh
Confidence            999999988864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.91  E-value=2.3e-09  Score=112.63  Aligned_cols=90  Identities=32%  Similarity=0.506  Sum_probs=76.2

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++...      ++..||+|+++... ....+.+.+|+.++..+ +|+|||+++++|......
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            46777789999999999998742      23579999997543 23345789999999999 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++|+|.++++.
T Consensus       118 ~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         118 LVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             EEeHhhccCCcHHHHHHh
Confidence            999999999999999964

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=5.7e-09  Score=105.23  Aligned_cols=88  Identities=30%  Similarity=0.466  Sum_probs=74.9

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++... +++.||+|.+....   ......+.+|+.++++++|+|++++.+.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            555679999999999999864 48899999986432   12235678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        82 ~~~~~L~~~~~~   93 (285)
T cd05605          82 MNGGDLKFHIYN   93 (285)
T ss_pred             cCCCcHHHHHHh
Confidence            999999988864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.90  E-value=3.2e-09  Score=111.45  Aligned_cols=92  Identities=24%  Similarity=0.273  Sum_probs=78.5

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ..++|...+.||+|+||.||++.... +..+|+|.+...   .....+.+..|+.++..++|||++++++++......++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            34577888899999999999998754 789999998642   22334568899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++|+|.+++..
T Consensus       121 v~Ey~~gg~L~~~l~~  136 (370)
T cd05596         121 VMEYMPGGDLVNLMSN  136 (370)
T ss_pred             EEcCCCCCcHHHHHHh
Confidence            9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.89  E-value=4.5e-09  Score=110.28  Aligned_cols=95  Identities=21%  Similarity=0.256  Sum_probs=80.1

Q ss_pred             HHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      +....++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+..|+.++..++||||+++++.+..+..
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            33445678888899999999999999754 788999998642   12234568899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++||||+++|+|.+++..
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~  136 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSN  136 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHh
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.89  E-value=5.5e-09  Score=104.27  Aligned_cols=83  Identities=29%  Similarity=0.485  Sum_probs=71.3

Q ss_pred             eecccCceeEEEEEecC---CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          480 KLGEGGFGPVYKGTLVE---GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      .||+|+||.||+|...+   +..+|+|.++.... .....|.+|+.++.+++|+|++++++++......++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            68999999999998643   45799998875432 334578999999999999999999999998889999999999999


Q ss_pred             HHHHhcC
Q 008046          556 LDFFIFD  562 (579)
Q Consensus       556 L~~~l~~  562 (579)
                      |.++|..
T Consensus        82 L~~~l~~   88 (269)
T cd05087          82 LKGYLRS   88 (269)
T ss_pred             HHHHHHH
Confidence            9999965

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.89  E-value=5.5e-09  Score=109.83  Aligned_cols=95  Identities=22%  Similarity=0.356  Sum_probs=81.4

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ....|.....||+|.|+.|..+++.. +..||+|.+++..  ....+.+.+|+++|..+.|||||+++.+......+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            34567777899999999999999754 8999999998652  23345689999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCC
Q 008046          548 YEYMPNKSLDFFIFDIDW  565 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~~~  565 (579)
                      +||..+|.++++|....+
T Consensus       134 ~eya~~ge~~~yl~~~gr  151 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGR  151 (596)
T ss_pred             EEeccCchhHHHHHhccc
Confidence            999999999999975433

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.88  E-value=6.8e-09  Score=103.28  Aligned_cols=90  Identities=26%  Similarity=0.442  Sum_probs=77.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++... +++.+|+|.++..   .......|.+|+.+++.++|||++++++++...+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            45677789999999999999965 5889999987632   2233457899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        82 e~~~~~~L~~~~~~   95 (267)
T cd08228          82 ELADAGDLSQMIKY   95 (267)
T ss_pred             EecCCCcHHHHHHH
Confidence            99999999998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.88  E-value=7.8e-09  Score=102.48  Aligned_cols=91  Identities=32%  Similarity=0.523  Sum_probs=79.9

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .++|...++||+|+||.||++...++..+|+|.+.... ...+++.+|+.++.+++|+|++++++++......++|+||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            35677778999999999999998777889999987542 34578999999999999999999999998888999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        84 ~~~~L~~~i~~~   95 (261)
T cd05034          84 SKGSLLDFLKSG   95 (261)
T ss_pred             CCCCHHHHHhcc
Confidence            999999999753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=5.9e-09  Score=104.63  Aligned_cols=91  Identities=25%  Similarity=0.460  Sum_probs=80.0

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .++|...+.||+|+||.||++... ++..+|+|.+........+.|.+|+.++.+++|+|++++++.+..+...++|+||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            345667789999999999999975 4789999998765555567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|.+++..
T Consensus        84 ~~~~~L~~~~~~   95 (280)
T cd06611          84 CDGGALDSIMLE   95 (280)
T ss_pred             cCCCcHHHHHHH
Confidence            999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=7.4e-09  Score=106.93  Aligned_cols=89  Identities=21%  Similarity=0.290  Sum_probs=76.5

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.... ++.+|+|.+...   .....+.|..|+.++..++|+||+++++++...+..++|+|
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            56667899999999999999754 889999998642   22334568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~g~~L~~~l~~   94 (331)
T cd05597          82 YYVGGDLLTLLSK   94 (331)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999999854

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.88  E-value=1.1e-09  Score=116.65  Aligned_cols=89  Identities=30%  Similarity=0.458  Sum_probs=74.4

Q ss_pred             ccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC------CeEEEEE
Q 008046          477 SYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------DESMLIY  548 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~~~~lV~  548 (579)
                      ..+.||+|+||.||+|+.+ .|+.||||..+... ....+...+|+++|++++|+|||++.+.-.+.      ....+||
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            3468999999999999965 49999999998643 34467889999999999999999998875543      3578999


Q ss_pred             eccCCCCHHHHhcCCCC
Q 008046          549 EYMPNKSLDFFIFDIDW  565 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~~  565 (579)
                      ||+++|||...|.++.+
T Consensus        97 EyC~gGsL~~~L~~PEN  113 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSPEN  113 (732)
T ss_pred             eecCCCcHHHHhcCccc
Confidence            99999999999987554

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.87  E-value=5.6e-09  Score=113.36  Aligned_cols=88  Identities=17%  Similarity=0.176  Sum_probs=75.5

Q ss_pred             ccccceecccCceeEEEEEecC--CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE--GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~--g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |...+.||+|+||.||++....  +..||+|.+..........+.+|+.++..++|||||++++++...+..+|||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            6667899999999999998543  56788888765444445678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.++|.+
T Consensus       149 gg~L~~~l~~  158 (478)
T PTZ00267        149 GGDLNKQIKQ  158 (478)
T ss_pred             CCCHHHHHHH
Confidence            9999998864

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.87  E-value=5.3e-09  Score=105.56  Aligned_cols=91  Identities=32%  Similarity=0.613  Sum_probs=77.9

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...+.||+|+||.||++...      ++..+|+|.+........+.+.+|+.++.+++|+|++++.+++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            45667789999999999999742      245689999876555556789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++++|.+++...
T Consensus        85 v~e~~~~~~L~~~i~~~  101 (288)
T cd05093          85 VFEYMKHGDLNKFLRAH  101 (288)
T ss_pred             EEEcCCCCCHHHHHHHc
Confidence            99999999999999643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.87  E-value=7e-09  Score=104.33  Aligned_cols=89  Identities=35%  Similarity=0.561  Sum_probs=75.6

Q ss_pred             cccccceecccCceeEEEEEe-----cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTL-----VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +|+..++||+|+||.||+|..     ..+..+|+|.+.... .+....|.+|+.++++++|+|++++++++..+...++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   85 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML   85 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence            455667999999999999984     235789999997432 33446899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++|+|.+++..
T Consensus        86 ~e~~~~~~L~~~l~~  100 (283)
T cd05090          86 FEYLNQGDLHEFLIM  100 (283)
T ss_pred             EEcCCCCcHHHHHHh
Confidence            999999999999853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.87  E-value=6.3e-09  Score=105.03  Aligned_cols=91  Identities=24%  Similarity=0.489  Sum_probs=76.7

Q ss_pred             cccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      +++|...+.||+|+||.||+|...+      +..||+|.++... ......+.+|+.++..++|+|++++++.+......
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            4567777899999999999997532      4579999886442 22345788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++||||+++|+|.+++..
T Consensus        85 ~lv~e~~~~g~L~~~l~~  102 (288)
T cd05061          85 LVVMELMAHGDLKSYLRS  102 (288)
T ss_pred             EEEEeCCCCCCHHHHHHH
Confidence            999999999999999964

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.87  E-value=5.6e-09  Score=104.08  Aligned_cols=91  Identities=29%  Similarity=0.492  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .+|...+.||+|+||.||+|....    ...+|+|.++... ....+.|..|+.++.+++|||++++.+++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            356666899999999999998642    3379999987542 23356899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++++|.+++...
T Consensus        84 ~e~~~~~~L~~~~~~~   99 (267)
T cd05066          84 TEYMENGSLDAFLRKH   99 (267)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999999653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.87  E-value=9.2e-09  Score=106.20  Aligned_cols=90  Identities=19%  Similarity=0.232  Sum_probs=76.7

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+..|+.++..++|+||+++.+++...+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            356677899999999999999754 788999998642   1223456888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        81 Ey~~gg~L~~~l~~   94 (331)
T cd05624          81 DYYVGGDLLTLLSK   94 (331)
T ss_pred             eCCCCCcHHHHHHH
Confidence            99999999999964

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.86  E-value=7e-09  Score=102.58  Aligned_cols=89  Identities=33%  Similarity=0.519  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...+.||+|+||.||++... ++.||+|.+..... ..+.+.+|+.++.+++|+|++++++++......++|+||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            34566689999999999999864 78999999975533 56789999999999999999999999988889999999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +++|.+++...
T Consensus        84 ~~~L~~~~~~~   94 (256)
T cd05039          84 KGSLVDYLRSR   94 (256)
T ss_pred             CCcHHHHHHhc
Confidence            99999998653

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=8.8e-09  Score=105.40  Aligned_cols=82  Identities=20%  Similarity=0.258  Sum_probs=71.7

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++.... ++.+|+|.++..   .......+.+|+.++.+++||||+++++.+...+..++|+||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            6999999999999754 788999998643   233456788999999999999999999999999999999999999999


Q ss_pred             HHHhcC
Q 008046          557 DFFIFD  562 (579)
Q Consensus       557 ~~~l~~  562 (579)
                      .+++..
T Consensus        81 ~~~l~~   86 (312)
T cd05585          81 FHHLQR   86 (312)
T ss_pred             HHHHHh
Confidence            999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.86  E-value=8.8e-09  Score=105.98  Aligned_cols=84  Identities=24%  Similarity=0.264  Sum_probs=72.5

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      +.||+|+||.||++... ++..||+|.++..   .......+.+|+.++.+++|||++++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            37899999999999864 4889999999743   2233457789999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|..++..
T Consensus        81 ~L~~~l~~   88 (323)
T cd05595          81 ELFFHLSR   88 (323)
T ss_pred             cHHHHHHH
Confidence            99988864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.86  E-value=1e-08  Score=107.24  Aligned_cols=89  Identities=21%  Similarity=0.360  Sum_probs=76.9

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.... ++.+|+|.++..   .......+..|+.++.+++|+|++++++.+...+..++|||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            56677899999999999998754 889999999643   22334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~gg~L~~~l~~   94 (360)
T cd05627          82 FLPGGDMMTLLMK   94 (360)
T ss_pred             CCCCccHHHHHHh
Confidence            9999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.86  E-value=6.2e-09  Score=104.38  Aligned_cols=90  Identities=31%  Similarity=0.631  Sum_probs=77.4

Q ss_pred             cccccceecccCceeEEEEEecC------CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      +|...+.||+|+||.||++...+      +..+|+|.++..... ..+.|.+|+.++.+++|+|++++++++......++
T Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   85 (280)
T cd05049           6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM   85 (280)
T ss_pred             HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence            45556799999999999998643      468999999765433 45789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.++|...
T Consensus        86 v~e~~~~~~L~~~i~~~  102 (280)
T cd05049          86 VFEYMEHGDLNKFLRSH  102 (280)
T ss_pred             EEecCCCCCHHHHHHhc
Confidence            99999999999999753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.86  E-value=7.9e-09  Score=103.06  Aligned_cols=85  Identities=27%  Similarity=0.434  Sum_probs=71.5

Q ss_pred             eecccCceeEEEEEecC---CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          480 KLGEGGFGPVYKGTLVE---GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      +||+|+||.||+|....   ...+++|.+.... ......|.+|+.+++.++|+||+++++.+......++|+||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            68999999999997543   3468888876432 2334578999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC
Q 008046          556 LDFFIFDID  564 (579)
Q Consensus       556 L~~~l~~~~  564 (579)
                      |.++|....
T Consensus        82 L~~~l~~~~   90 (269)
T cd05042          82 LKNYLRSNR   90 (269)
T ss_pred             HHHHHHhcc
Confidence            999997543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.86  E-value=9.3e-09  Score=105.76  Aligned_cols=84  Identities=24%  Similarity=0.262  Sum_probs=72.7

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      +.||+|+||.||++... +++.+|+|.++..   .......+.+|+.++.+++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999865 4889999999743   1233457889999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|.+++..
T Consensus        81 ~L~~~l~~   88 (323)
T cd05571          81 ELFFHLSR   88 (323)
T ss_pred             cHHHHHHH
Confidence            99998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.86  E-value=7.4e-09  Score=103.14  Aligned_cols=90  Identities=30%  Similarity=0.607  Sum_probs=76.9

Q ss_pred             ccccccceecccCceeEEEEEecC-C---cEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-G---QEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++.... +   ..+|+|.++... ....+.|.+|+.++.+++|+|++++.+++...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            456677899999999999999753 3   369999987542 33456899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++++|.+++..
T Consensus        85 ~e~~~~~~L~~~~~~   99 (268)
T cd05063          85 TEYMENGALDKYLRD   99 (268)
T ss_pred             EEcCCCCCHHHHHHh
Confidence            999999999999965

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.86  E-value=6.7e-09  Score=109.03  Aligned_cols=98  Identities=20%  Similarity=0.242  Sum_probs=82.1

Q ss_pred             HHHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEE
Q 008046          465 FASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ  540 (579)
Q Consensus       465 ~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~  540 (579)
                      ..++....++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+..|+.++..++||||+++++.+..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            34445556788888999999999999999764 788999998632   12234568899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +...++|+||+++|+|.+++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~  136 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSN  136 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHh
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.85  E-value=7.6e-09  Score=102.41  Aligned_cols=87  Identities=29%  Similarity=0.549  Sum_probs=75.6

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      |...+.||+|+||.||++....+..+|+|.+.... .....|.+|+.++.+++|+|++++.+++...+..++|+||++++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG   84 (256)
T ss_pred             cchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence            45557899999999999988777789999986432 23467999999999999999999999999889999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|.+++..
T Consensus        85 ~L~~~l~~   92 (256)
T cd05059          85 CLLNYLRE   92 (256)
T ss_pred             CHHHHHHh
Confidence            99999964

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.85  E-value=7.3e-09  Score=103.60  Aligned_cols=92  Identities=30%  Similarity=0.529  Sum_probs=77.5

Q ss_pred             ccccccceecccCceeEEEEEecC------CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|.....||+|+||.||++....      ...+++|.+...... ..++|.+|++++.+++|+|++++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            456677899999999999998642      457999988654333 3568999999999999999999999998888999


Q ss_pred             EEEeccCCCCHHHHhcCCC
Q 008046          546 LIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +|+||+++|+|.+++....
T Consensus        85 lv~e~~~~~~L~~~i~~~~  103 (275)
T cd05046          85 MILEYTDLGDLKQFLRATK  103 (275)
T ss_pred             EEEEecCCCcHHHHHHhcc
Confidence            9999999999999997543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.85  E-value=6.3e-09  Score=103.79  Aligned_cols=88  Identities=30%  Similarity=0.544  Sum_probs=75.4

Q ss_pred             ccccceecccCceeEEEEEecC-C---cEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-G---QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +...+.||+|+||.||+|.... +   ..||+|.++.. .....++|..|+.++++++|||++++.+++....+.++|+|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence            4556799999999999999754 3   36999998754 23345689999999999999999999999998999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        86 ~~~~~~L~~~l~~   98 (269)
T cd05065          86 FMENGALDSFLRQ   98 (269)
T ss_pred             cCCCCcHHHHHhh
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.85  E-value=9.2e-09  Score=102.04  Aligned_cols=89  Identities=35%  Similarity=0.516  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...++||+|+||.||++...+++.+|+|.+.... ...+.|.+|+.++++++|+|++++.++. ..+..++++||++
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~   83 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME   83 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence            4566678999999999999998888999999987543 3456899999999999999999999876 4567899999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +|+|.+++...
T Consensus        84 ~~~L~~~~~~~   94 (260)
T cd05067          84 NGSLVDFLKTP   94 (260)
T ss_pred             CCCHHHHHHhc
Confidence            99999998653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.85  E-value=5.5e-09  Score=103.95  Aligned_cols=89  Identities=26%  Similarity=0.452  Sum_probs=76.3

Q ss_pred             cccccceecccCceeEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.. .+++.+|||.+...   .....++|.+|+.++..++|+|++++++++..++..++++|
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            456667999999999999995 46889999988643   22234689999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus        83 ~~~~~~L~~~~~~   95 (267)
T cd08229          83 LADAGDLSRMIKH   95 (267)
T ss_pred             ecCCCCHHHHHHH
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.84  E-value=9.9e-09  Score=103.32  Aligned_cols=89  Identities=20%  Similarity=0.319  Sum_probs=76.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|+||.||++... .+..+|+|.+.... ....+.+.+|++++..++|+||+++++.+......++|+||+
T Consensus         6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (284)
T cd06620           6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFM   85 (284)
T ss_pred             HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecC
Confidence            4555679999999999999865 47889999886442 334568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        86 ~~~~L~~~~~~   96 (284)
T cd06620          86 DCGSLDRIYKK   96 (284)
T ss_pred             CCCCHHHHHHh
Confidence            99999988754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.84  E-value=7.7e-09  Score=103.71  Aligned_cols=92  Identities=27%  Similarity=0.517  Sum_probs=78.3

Q ss_pred             cccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      +++|...+.||+|+||.||++....      +..||+|.+.... ......|..|+.++++++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4567777899999999999998753      4578999886443 23345799999999999999999999999998899


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++|+|.+++...
T Consensus        85 ~lv~e~~~g~~L~~~i~~~  103 (277)
T cd05036          85 FILLELMAGGDLKSFLREN  103 (277)
T ss_pred             EEEEecCCCCCHHHHHHHh
Confidence            9999999999999999653

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.84  E-value=1.3e-08  Score=104.90  Aligned_cols=84  Identities=24%  Similarity=0.275  Sum_probs=72.9

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      +.||+|+||.||++... +++.+|+|.+...   .......+.+|+.++..++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            36899999999999864 4889999999743   2234567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|..++..
T Consensus        81 ~L~~~l~~   88 (328)
T cd05593          81 ELFFHLSR   88 (328)
T ss_pred             CHHHHHHh
Confidence            99988864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.84  E-value=9.2e-09  Score=103.12  Aligned_cols=92  Identities=26%  Similarity=0.487  Sum_probs=77.7

Q ss_pred             hcccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      .+++|...++||+|+||.||++...      .+..+|+|.+.... .....+|.+|+.++..++|+|++++++++..+.+
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            3466788889999999999998753      24679999986432 2334579999999999999999999999998899


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+++|+|.+++..
T Consensus        84 ~~lv~e~~~~~~L~~~~~~  102 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRS  102 (277)
T ss_pred             eEEEEecCCCCCHHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.84  E-value=1.7e-08  Score=102.46  Aligned_cols=90  Identities=26%  Similarity=0.467  Sum_probs=79.2

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .+|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+|++++++++..++..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            4577778999999999999996 458899999997654445567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++.+
T Consensus        99 ~~~~L~~~~~~  109 (297)
T cd06656          99 AGGSLTDVVTE  109 (297)
T ss_pred             CCCCHHHHHHh
Confidence            99999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.84  E-value=7.4e-09  Score=107.91  Aligned_cols=83  Identities=24%  Similarity=0.309  Sum_probs=71.5

Q ss_pred             ccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          477 SYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      ..++||+|+||.||++... +++.||||.+..... ...+.+.+|++++.+++|+||+++++++...+..++|+||+++|
T Consensus        78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  157 (353)
T PLN00034         78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG  157 (353)
T ss_pred             hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence            3468999999999999865 488999999965422 33467999999999999999999999999999999999999999


Q ss_pred             CHHHH
Q 008046          555 SLDFF  559 (579)
Q Consensus       555 sL~~~  559 (579)
                      +|...
T Consensus       158 ~L~~~  162 (353)
T PLN00034        158 SLEGT  162 (353)
T ss_pred             ccccc
Confidence            98654

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.84  E-value=9.8e-09  Score=101.26  Aligned_cols=84  Identities=25%  Similarity=0.508  Sum_probs=73.3

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      +.||+|+||.||++... +++.+|+|.+.... .+....|.+|++++.+++|+|++++++++......++|+||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            37899999999999875 58899999876442 33456799999999999999999999999999999999999999999


Q ss_pred             HHHhcC
Q 008046          557 DFFIFD  562 (579)
Q Consensus       557 ~~~l~~  562 (579)
                      .+++..
T Consensus        81 ~~~~~~   86 (252)
T cd05084          81 LTFLRT   86 (252)
T ss_pred             HHHHHh
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.84  E-value=1e-08  Score=105.72  Aligned_cols=90  Identities=21%  Similarity=0.261  Sum_probs=77.3

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++... +++.+|+|.++...   ....+.+..|+.++..++|+|++++.+++...+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            5667789999999999999865 48899999997431   2344578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++|+|.+++...
T Consensus        82 ~~~~~~L~~~l~~~   95 (330)
T cd05601          82 YQPGGDLLSLLNRY   95 (330)
T ss_pred             CCCCCCHHHHHHHh
Confidence            99999999998653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.84  E-value=5.1e-09  Score=105.40  Aligned_cols=97  Identities=27%  Similarity=0.400  Sum_probs=79.4

Q ss_pred             HHHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEE--
Q 008046          465 FASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ--  540 (579)
Q Consensus       465 ~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~--  540 (579)
                      ++.+..+.++|...+.||+|+||.||++.... ++.+|+|.+... .....++.+|+.++.++ +|+|++++++++..  
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            45556677888888999999999999998754 788999988643 22345788999999999 69999999998853  


Q ss_pred             ---CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ---ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ---~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                         ++..++||||+++++|.+++..
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~  113 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKG  113 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHH
Confidence               3568999999999999998863

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.84  E-value=6.8e-09  Score=104.17  Aligned_cols=92  Identities=26%  Similarity=0.519  Sum_probs=77.6

Q ss_pred             cccccccceecccCceeEEEEEecC-----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~  544 (579)
                      .++|...+.||+|+||.||+|....     +..|++|.+.... ....+.+.+|+.++.+++|+|++++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            3567777899999999999999765     6789999987542 3345678999999999999999999999876 4678


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++++||+++|+|.+++...
T Consensus        85 ~~~~~~~~~~~L~~~l~~~  103 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQC  103 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhc
Confidence            9999999999999998654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.83  E-value=1.8e-08  Score=100.16  Aligned_cols=88  Identities=31%  Similarity=0.594  Sum_probs=75.7

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      |...+.||+|+||.||++...+++.+|+|.++....      ...+.+.+|+.++.+++|+|++++.+++......++|+
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            445578999999999999887889999999864321      12346889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus        82 e~~~~~~L~~~l~~   95 (265)
T cd06631          82 EFVPGGSISSILNR   95 (265)
T ss_pred             ecCCCCcHHHHHHh
Confidence            99999999999964

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.83  E-value=9.2e-09  Score=103.30  Aligned_cols=91  Identities=31%  Similarity=0.501  Sum_probs=75.9

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECC--eEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--ESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--~~~lV~Ey  550 (579)
                      ++...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+.+|.....+  ...|.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            35556799999999999999765 8899999987543333667999999999999999999999854444  68899999


Q ss_pred             cCCCCHHHHhcCCC
Q 008046          551 MPNKSLDFFIFDID  564 (579)
Q Consensus       551 ~~~GsL~~~l~~~~  564 (579)
                      +++|||.+++....
T Consensus        98 ~~~GsL~~~~~~~g  111 (313)
T KOG0198|consen   98 APGGSLSDLIKRYG  111 (313)
T ss_pred             cCCCcHHHHHHHcC
Confidence            99999999997543

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.83  E-value=1.3e-08  Score=102.81  Aligned_cols=90  Identities=28%  Similarity=0.520  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...++||+|+||.||++.... +..+++|.+........+.+.+|+.++++++|+|++++.+.+......++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            446666799999999999999755 7899999997665556778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|..++..
T Consensus        92 ~~~~l~~~~~~  102 (292)
T cd06644          92 PGGAVDAIMLE  102 (292)
T ss_pred             CCCcHHHHHHh
Confidence            99999888754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.83  E-value=1.5e-08  Score=114.89  Aligned_cols=90  Identities=20%  Similarity=0.366  Sum_probs=77.8

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++.... ++.||+|++.....   ...+.|.+|++++.+++|||++++++++..++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            356777899999999999998654 88999999975322   23457999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        82 EY~eGGSL~~lL~s   95 (932)
T PRK13184         82 PYIEGYTLKSLLKS   95 (932)
T ss_pred             EcCCCCCHHHHHHH
Confidence            99999999999864

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.83  E-value=8.8e-09  Score=103.86  Aligned_cols=91  Identities=31%  Similarity=0.556  Sum_probs=77.9

Q ss_pred             cccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      .++|...+.||+|+||.||++...      .+..+|+|.+.... ....++|.+|+.++.+++|+|++++.+++......
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            356777789999999999999853      35689999987542 23456799999999999999999999999998899


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++|+|.+++..
T Consensus        84 ~lv~e~~~~~~L~~~l~~  101 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRH  101 (288)
T ss_pred             EEEEecCCCCCHHHHHHH
Confidence            999999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.83  E-value=1.6e-08  Score=99.92  Aligned_cols=88  Identities=31%  Similarity=0.557  Sum_probs=75.9

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      |...+.||+|+||.||++... ++..+++|.+....     .+..+.+.+|+.++++++|+|++++.+++......++|+
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            445578999999999999976 68899999986432     224568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus        82 e~~~~~~L~~~~~~   95 (258)
T cd06632          82 ELVPGGSLAKLLKK   95 (258)
T ss_pred             EecCCCcHHHHHHh
Confidence            99999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.82  E-value=1e-08  Score=102.33  Aligned_cols=84  Identities=26%  Similarity=0.461  Sum_probs=70.3

Q ss_pred             eecccCceeEEEEEecCC---cEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          480 KLGEGGFGPVYKGTLVEG---QEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      +||+|+||.||++...++   ..+++|.+.... ....+.|.+|+.+++.++|||++++++.+....+.++|+||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            689999999999975443   346677766432 2345689999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC
Q 008046          556 LDFFIFDI  563 (579)
Q Consensus       556 L~~~l~~~  563 (579)
                      |.+++...
T Consensus        82 L~~~l~~~   89 (268)
T cd05086          82 LKSYLSQE   89 (268)
T ss_pred             HHHHHHhh
Confidence            99999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.82  E-value=2.4e-08  Score=101.27  Aligned_cols=90  Identities=26%  Similarity=0.477  Sum_probs=78.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .+|...+.||+|+||.||++... .++.+|+|.+........+.+.+|+.++..++|+|++++++.+..+.+.++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            35666778999999999999854 58899999997654455678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++.+
T Consensus       100 ~~~~L~~~~~~  110 (296)
T cd06654         100 AGGSLTDVVTE  110 (296)
T ss_pred             CCCCHHHHHHh
Confidence            99999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.82  E-value=8.1e-09  Score=99.52  Aligned_cols=91  Identities=27%  Similarity=0.386  Sum_probs=78.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||.|+||.|...+.+. |...|+|+++...   ....+...+|..++..+.||.+++|++-+.....++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            345556799999999999999765 7889999997542   233456789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|.|.++|+..
T Consensus       124 eyv~GGElFS~Lrk~  138 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKS  138 (355)
T ss_pred             eccCCccHHHHHHhc
Confidence            999999999999753

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.82  E-value=9.8e-09  Score=102.06  Aligned_cols=88  Identities=32%  Similarity=0.567  Sum_probs=76.8

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      +|...++||+|+||.||++...+ +..+|+|.++.. ....+++.+|+.++.+++|+|++++++++...+..++|+||++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            35556799999999999999754 788999998753 3345689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +++|.+++..
T Consensus        86 ~~~L~~~~~~   95 (263)
T cd05052          86 YGNLLDYLRE   95 (263)
T ss_pred             CCcHHHHHHh
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.82  E-value=9.9e-09  Score=102.14  Aligned_cols=84  Identities=23%  Similarity=0.461  Sum_probs=70.9

Q ss_pred             ceecccCceeEEEEEecC-------------CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          479 NKLGEGGFGPVYKGTLVE-------------GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      +.||+|+||.||+|....             ...|++|.+..........|..|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999998532             2258899887544444568899999999999999999999999988999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|..++..
T Consensus        81 lv~e~~~~~~l~~~~~~   97 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR   97 (262)
T ss_pred             EEEecccCCCHHHHHHh
Confidence            99999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.82  E-value=1.5e-08  Score=104.65  Aligned_cols=89  Identities=19%  Similarity=0.260  Sum_probs=76.1

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...++||+|+||.||++.... ++.+|+|.+...   .....+.|..|+.++..++|+|++++.+++...+..++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            56667899999999999999765 778999998642   12233468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 y~~~g~L~~~l~~   94 (332)
T cd05623          82 YYVGGDLLTLLSK   94 (332)
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999999965

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.82  E-value=1e-08  Score=103.57  Aligned_cols=99  Identities=28%  Similarity=0.410  Sum_probs=82.1

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEE
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ  540 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~  540 (579)
                      +.+.++..++++|...+.||+|+||.||++... +++.+|+|.+... ......+.+|+.++.++ +|+|++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            445666778889999999999999999999874 4789999998643 22345788899999998 89999999999875


Q ss_pred             C-----CeEEEEEeccCCCCHHHHhcC
Q 008046          541 A-----DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~-----~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .     ...++|+||+++|+|.+++..
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~  117 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKG  117 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHH
Confidence            4     358999999999999998864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.82  E-value=1.4e-08  Score=105.65  Aligned_cols=91  Identities=27%  Similarity=0.390  Sum_probs=79.8

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ..|...++||+|.||.||+++.+. |+.+|+|.+.+...   ...+...+|+.+|.++. |||+|.+.+.+......++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            456666899999999999999876 99999999975533   23468999999999998 99999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      ||++.+|.|.+.|...
T Consensus       115 mEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK  130 (382)
T ss_pred             EEecCCchHHHHHHHc
Confidence            9999999999998654

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.82  E-value=1.4e-08  Score=101.98  Aligned_cols=87  Identities=28%  Similarity=0.496  Sum_probs=76.0

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      ...++||+|+||.||++.... +..+++|.+........+.+.+|++++..++|+|++++++.+...+..++|+||++++
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            334689999999999999764 7788999987655555678999999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|..++..
T Consensus        88 ~l~~~~~~   95 (282)
T cd06643          88 AVDAVMLE   95 (282)
T ss_pred             cHHHHHHh
Confidence            99998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=9.8e-09  Score=106.68  Aligned_cols=90  Identities=26%  Similarity=0.373  Sum_probs=78.1

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++... +++.||+|+++..   .....+.+..|+.++..++|+||+++++.+...+..++|+|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            5667789999999999999975 4889999999743   12345678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++|+|.+++...
T Consensus        82 ~~~~~~L~~~l~~~   95 (350)
T cd05573          82 YMPGGDLMNLLIRK   95 (350)
T ss_pred             CCCCCCHHHHHHHc
Confidence            99999999998653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.81  E-value=1.7e-08  Score=100.49  Aligned_cols=90  Identities=23%  Similarity=0.458  Sum_probs=77.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...++||+|+||.||++... +++.+|+|.++.........+.+|+.++..++|+|++++++.+...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            35566678999999999999864 48899999987554444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        89 ~~~~L~~~~~~   99 (267)
T cd06645          89 GGGSLQDIYHV   99 (267)
T ss_pred             CCCcHHHHHHh
Confidence            99999998853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.81  E-value=8.3e-09  Score=107.11  Aligned_cols=90  Identities=27%  Similarity=0.483  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC-Ce
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA-DE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~-~~  543 (579)
                      ++|...+.||+|+||.||++..      ..++.||||.++... ......+.+|+.++.++ +|+||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            4577778999999999999973      346789999997542 23346788999999999 789999999988654 56


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+++|+|.+++..
T Consensus        87 ~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             eEEEEeccCCCcHHHHHHh
Confidence            7899999999999999964

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.81  E-value=1.2e-08  Score=103.79  Aligned_cols=90  Identities=30%  Similarity=0.461  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++...      .+..+|+|+++... ....+.+.+|+.++.++ +|+||+++++++...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            46777789999999999998741      24579999987542 23346799999999999 799999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++|+|.+++..
T Consensus       115 ~lv~e~~~~~~L~~~i~~  132 (302)
T cd05055         115 LVITEYCCYGDLLNFLRR  132 (302)
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999999999964

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.81  E-value=1.5e-08  Score=102.15  Aligned_cols=89  Identities=22%  Similarity=0.302  Sum_probs=74.5

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV~E  549 (579)
                      +|...+.||.|++|.||++.... ++.+|+|.+.... ......+.+|++++++++|+||+++++++...  ...++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            56667899999999999999754 7889999987542 23456899999999999999999999988653  46899999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus        82 ~~~~~~L~~~l~~   94 (287)
T cd06621          82 YCEGGSLDSIYKK   94 (287)
T ss_pred             ecCCCCHHHHHHH
Confidence            9999999988753

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.81  E-value=6.2e-09  Score=104.55  Aligned_cols=103  Identities=22%  Similarity=0.257  Sum_probs=82.0

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .|...+.||.|..|+||.+.+.. +...|+|++.+..   .........|-+||..++||-|+.|++.+...+..+|+||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            44555799999999999999866 5789999997542   2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCcccCcccccc
Q 008046          550 YMPNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       550 y~~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      ||++|+|..++..+.. +..-.-..|++
T Consensus       158 yCpGGdL~~LrqkQp~-~~fse~~aRFY  184 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPG-KRFSESAARFY  184 (459)
T ss_pred             cCCCccHHHHHhhCCC-CccchhhHHHH
Confidence            9999999998875443 33333444444

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.81  E-value=2.6e-08  Score=99.88  Aligned_cols=88  Identities=23%  Similarity=0.424  Sum_probs=75.2

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |...++||+|+||.||++... ++..+|+|.+.... ....+.|.+|+.++.+++|+|++++++++..+...++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            445578999999999999864 57899999886432 2334678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +++|.+++..
T Consensus        86 ~~~l~~~i~~   95 (277)
T cd06641          86 GGSALDLLEP   95 (277)
T ss_pred             CCcHHHHHhc
Confidence            9999998853

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.81  E-value=9.5e-09  Score=101.61  Aligned_cols=84  Identities=32%  Similarity=0.623  Sum_probs=70.2

Q ss_pred             ceecccCceeEEEEEecCCc-----------EEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          479 NKLGEGGFGPVYKGTLVEGQ-----------EIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~-----------~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +.||+|+||.||++...+..           .+++|.+...... ...|.+|+.++++++|+|++++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            36899999999999986532           4788877644322 6789999999999999999999999988 778999


Q ss_pred             EeccCCCCHHHHhcCCC
Q 008046          548 YEYMPNKSLDFFIFDID  564 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~~  564 (579)
                      +||+++|+|.+++....
T Consensus        79 ~e~~~~~~L~~~l~~~~   95 (259)
T cd05037          79 EEYVKFGPLDVFLHREK   95 (259)
T ss_pred             EEcCCCCcHHHHHHhhc
Confidence            99999999999997543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.81  E-value=2e-08  Score=99.06  Aligned_cols=89  Identities=22%  Similarity=0.381  Sum_probs=77.3

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++... ++..+++|.+...  .....+++.+|+.++++++|+|++++++++...+..++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            555678999999999999975 4789999998643  3345678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~l~~~   93 (256)
T cd08529          82 ENGDLHKLLKMQ   93 (256)
T ss_pred             CCCcHHHHHHHh
Confidence            999999999753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.80  E-value=2.1e-08  Score=99.11  Aligned_cols=89  Identities=19%  Similarity=0.276  Sum_probs=76.5

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |+..+.||+|+||.||.+... +++.+++|.+...  .....+++.+|++++++++|+|++++++++...+..++++||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            556689999999999988854 4788999988643  3344568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++|+|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (256)
T cd08221          82 NGGTLYDKIVRQ   93 (256)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.80  E-value=1.8e-08  Score=103.35  Aligned_cols=84  Identities=26%  Similarity=0.297  Sum_probs=71.5

Q ss_pred             ceecccCceeEEEEEe----cCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          479 NKLGEGGFGPVYKGTL----VEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~----~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      +.||+|+||.||++..    ..++.+|+|+++...  ......+..|+.++.+++|+||+++++++...+..++|+||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999998874    247899999997432  1234567889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        82 ~~~L~~~l~~   91 (318)
T cd05582          82 GGDLFTRLSK   91 (318)
T ss_pred             CCcHHHHHHH
Confidence            9999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.80  E-value=2.8e-08  Score=99.80  Aligned_cols=87  Identities=20%  Similarity=0.318  Sum_probs=73.8

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|+||.||++... .++.+|+|.+... .....++|.+|+.++.+++|+|++++++.+...+..++|+||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            3455578999999999999864 5789999998644 2334567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHh
Q 008046          552 PNKSLDFFI  560 (579)
Q Consensus       552 ~~GsL~~~l  560 (579)
                      ++++|..+.
T Consensus        82 ~~~~l~~~~   90 (279)
T cd06619          82 DGGSLDVYR   90 (279)
T ss_pred             CCCChHHhh
Confidence            999997653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.80  E-value=1.9e-08  Score=104.73  Aligned_cols=92  Identities=24%  Similarity=0.435  Sum_probs=77.6

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCC----Cc-ccHHHHHHHHHHHhcCC-CCceeceeEEEEECCe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG----SG-QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADE  543 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~  543 (579)
                      ....|...+.||+|.||.|+.+... .++.||+|.+...    .. ...+...+|+.+++.++ ||||++++.+......
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            3456777789999999999999864 4899999977643    11 22445668999999998 9999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++||||+.+|+|.+++.+
T Consensus        95 ~~ivmEy~~gGdL~~~i~~  113 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN  113 (370)
T ss_pred             EEEEEEecCCccHHHHHHH
Confidence            9999999999999999976

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.80  E-value=1.6e-08  Score=104.10  Aligned_cols=84  Identities=18%  Similarity=0.279  Sum_probs=72.0

Q ss_pred             ceeccc--CceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEG--GFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G--~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ++||+|  +|+.||++... +++.||+|+++...  ....+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~   83 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY   83 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence            589999  78999999864 48899999997542  22345677899999999999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        84 ~~l~~~~~~   92 (327)
T cd08227          84 GSAKDLICT   92 (327)
T ss_pred             CcHHHHHHh
Confidence            999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.80  E-value=1.6e-08  Score=101.89  Aligned_cols=87  Identities=23%  Similarity=0.423  Sum_probs=73.8

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +|...+.||+|+||.||++.... ++.+|+|+++...  ....+.+.+|+.++.+++|+||+++++++...+..++|+||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            56677899999999999999764 7889999987532  23356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHh
Q 008046          551 MPNKSLDFFI  560 (579)
Q Consensus       551 ~~~GsL~~~l  560 (579)
                      ++++.|..+.
T Consensus        82 ~~~~~l~~~~   91 (287)
T cd07848          82 VEKNMLELLE   91 (287)
T ss_pred             CCCCHHHHHH
Confidence            9988776554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=98.79  E-value=3.7e-09  Score=109.57  Aligned_cols=91  Identities=27%  Similarity=0.517  Sum_probs=76.4

Q ss_pred             cccccCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       459 ~~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      +++++.+++|..       .+-||.|+=|.||.|++. ++.||||+++...       ..+++.|++++|+||+.+.|+|
T Consensus       117 e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVC  181 (904)
T KOG4721|consen  117 ELWEIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVC  181 (904)
T ss_pred             hhccCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeee
Confidence            466666776643       368999999999999984 5789999886432       2578889999999999999999


Q ss_pred             EECCeEEEEEeccCCCCHHHHhcCCC
Q 008046          539 IQADESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       539 ~~~~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      .+..-.+|||||++.|-|...|...+
T Consensus       182 tqsPcyCIiMEfCa~GqL~~VLka~~  207 (904)
T KOG4721|consen  182 TQSPCYCIIMEFCAQGQLYEVLKAGR  207 (904)
T ss_pred             cCCceeEEeeeccccccHHHHHhccC
Confidence            99999999999999999999997544

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.79  E-value=2.2e-08  Score=103.04  Aligned_cols=84  Identities=24%  Similarity=0.255  Sum_probs=72.3

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      +.||+|+||.||++... .++.+|+|.++..   .......+..|++++..++|+||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            36899999999999864 5889999999743   2233457889999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|..++..
T Consensus        81 ~L~~~l~~   88 (325)
T cd05594          81 ELFFHLSR   88 (325)
T ss_pred             cHHHHHHh
Confidence            99988864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.79  E-value=1.2e-08  Score=101.98  Aligned_cols=91  Identities=23%  Similarity=0.463  Sum_probs=77.3

Q ss_pred             ccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...+.||+|+||.||++....      +..+|+|.+.... .....++.+|+.++..++|+|++++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            456667899999999999998643      3679999987542 233568999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|+||+++|+|.+++...
T Consensus        86 ~v~e~~~~~~L~~~l~~~  103 (277)
T cd05032          86 VVMELMAKGDLKSYLRSR  103 (277)
T ss_pred             EEEecCCCCCHHHHHHhc
Confidence            999999999999999653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.79  E-value=1.8e-08  Score=102.13  Aligned_cols=90  Identities=18%  Similarity=0.293  Sum_probs=79.2

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.|...++||.|.-+.||++.. +.+..||||++.-. .....+++.+|+..|+.++||||++.+..+..+.++++||.|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            4567778999999999999985 55889999999744 233468899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      |..||+.++++.
T Consensus       106 Ma~GS~ldIik~  117 (516)
T KOG0582|consen  106 MAGGSLLDIIKT  117 (516)
T ss_pred             hcCCcHHHHHHH
Confidence            999999999974

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.79  E-value=3e-08  Score=99.47  Aligned_cols=88  Identities=23%  Similarity=0.434  Sum_probs=76.3

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |...++||+|+||.||++... .+..+|+|.+.... ....+.+.+|+.++.++.|+|++++++.+......++|+||++
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence            445578999999999999875 47899999987442 3445689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        86 ~~~L~~~i~~   95 (277)
T cd06640          86 GGSALDLLRA   95 (277)
T ss_pred             CCcHHHHHhc
Confidence            9999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.79  E-value=2.3e-08  Score=103.21  Aligned_cols=84  Identities=19%  Similarity=0.323  Sum_probs=71.7

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.+|+|.++..   .....+.+..|..++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            378999999999998754 789999999753   223345688999999888 799999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        81 g~L~~~~~~   89 (329)
T cd05588          81 GDLMFHMQR   89 (329)
T ss_pred             CCHHHHHHH
Confidence            999988854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.79  E-value=2.1e-08  Score=103.19  Aligned_cols=84  Identities=26%  Similarity=0.419  Sum_probs=71.6

Q ss_pred             ceecccCceeEEEEEec----CCcEEEEEEecCC----CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          479 NKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG----SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.||+|+||.||++...    .++.+|+|.++..    .......+.+|+.++..++||||+++++.+...+..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            58999999999998753    4788999998743    122345678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        82 ~~~~~L~~~~~~   93 (323)
T cd05584          82 LSGGELFMHLER   93 (323)
T ss_pred             CCCchHHHHHHH
Confidence            999999998854

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.79  E-value=1.7e-08  Score=100.22  Aligned_cols=89  Identities=31%  Similarity=0.474  Sum_probs=76.4

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      +++...++||+|+||.||++....+..+|+|.+... ....+.|.+|+.++++++|+|++++.+.+.. ...++++||++
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA   83 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence            456677899999999999999777778999988743 2345689999999999999999999998876 77899999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +|+|.+++...
T Consensus        84 ~~~L~~~~~~~   94 (260)
T cd05073          84 KGSLLDFLKSD   94 (260)
T ss_pred             CCcHHHHHHhC
Confidence            99999999653

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.79  E-value=1.3e-08  Score=103.15  Aligned_cols=90  Identities=32%  Similarity=0.544  Sum_probs=75.1

Q ss_pred             ccccccceecccCceeEEEEEecC---------------CcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE---------------GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLG  536 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~---------------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g  536 (579)
                      ++|...++||+|+||.||++....               ...||+|.++.. .......|.+|++++.+++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            356666899999999999887532               235899998754 2334567999999999999999999999


Q ss_pred             EEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          537 CCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       537 ~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++...+..++||||+++++|.+++..
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~  110 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQ  110 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHh
Confidence            99999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.79  E-value=1.6e-08  Score=100.94  Aligned_cols=92  Identities=30%  Similarity=0.528  Sum_probs=76.5

Q ss_pred             HhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEEC------
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA------  541 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~------  541 (579)
                      .+++.|...+.||+|+||.||++.... ++.+|+|.+... ......+.+|+.++.++ +|+|++++.+++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            345667777899999999999998754 788999998643 34456889999999998 799999999998753      


Q ss_pred             CeEEEEEeccCCCCHHHHhcC
Q 008046          542 DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ...++|+||+++|+|.+++..
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~  102 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKN  102 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHh
Confidence            457899999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.79  E-value=1.5e-08  Score=103.83  Aligned_cols=90  Identities=29%  Similarity=0.559  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc----EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .+|...+.||+|+||.||+|.... +.    .||+|.++... ....++|..|+.++..++|+||++++|+|... ...+
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            357777899999999999998643 33    38999987543 34456899999999999999999999999764 5679


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus        86 v~e~~~~g~l~~~l~~~  102 (316)
T cd05108          86 ITQLMPFGCLLDYVREH  102 (316)
T ss_pred             eeecCCCCCHHHHHHhc
Confidence            99999999999998753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.78  E-value=2.9e-08  Score=100.24  Aligned_cols=89  Identities=25%  Similarity=0.420  Sum_probs=74.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++... +++.||+|.++... ......+.+|+.++.+++|+||+++++++......++|+||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            35666789999999999999875 47899999987432 23345788999999999999999999999888899999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ |+|.+++..
T Consensus        85 ~~-~~l~~~l~~   95 (288)
T cd07871          85 LD-SDLKQYLDN   95 (288)
T ss_pred             CC-cCHHHHHHh
Confidence            97 599988854

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.78  E-value=1.6e-08  Score=100.54  Aligned_cols=88  Identities=31%  Similarity=0.494  Sum_probs=74.5

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...++||+|+||.||++...+...||+|.++... ...+.|.+|+.++.+++|+|++++.+... ....++|+||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence            3466778999999999999988776789999997532 23468999999999999999999999864 456789999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        84 ~~~L~~~~~~   93 (262)
T cd05071          84 KGSLLDFLKG   93 (262)
T ss_pred             CCcHHHHHhh
Confidence            9999999965

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.78  E-value=4.6e-09  Score=104.19  Aligned_cols=85  Identities=32%  Similarity=0.552  Sum_probs=71.9

Q ss_pred             ceecccCceeEEEEEecC--------CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          479 NKLGEGGFGPVYKGTLVE--------GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.||+|+||.||++....        ...+|+|.+........++|..|+.++..++|+|++++++++..+...++|+||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998632        234888887654444556899999999999999999999999998899999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++|+|.+++...
T Consensus        81 ~~~g~L~~~l~~~   93 (258)
T cd05078          81 VKFGSLDTYLKKN   93 (258)
T ss_pred             CCCCcHHHHHhcC
Confidence            9999999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.78  E-value=3e-08  Score=99.99  Aligned_cols=88  Identities=30%  Similarity=0.462  Sum_probs=74.6

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++... .++.+|+|.+....   .+..+.+.+|+.++.+++|++++++.+.+...+..++|+||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            455578999999999999865 48899999986432   12234678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        82 ~~g~~L~~~l~~   93 (285)
T cd05630          82 MNGGDLKFHIYH   93 (285)
T ss_pred             cCCCcHHHHHHH
Confidence            999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.78  E-value=1.4e-08  Score=102.59  Aligned_cols=92  Identities=28%  Similarity=0.529  Sum_probs=77.2

Q ss_pred             hcccccccceecccCceeEEEEEecC------CcEEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKG-SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      ..++|...+.||+|+||.||++....      ...+|+|.+... ..+...++.+|+.++.++ +|+|++++++++...+
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            34567777899999999999998642      357999998754 233446789999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..++|+||+++|+|.+++..
T Consensus        90 ~~~li~e~~~~~~L~~~l~~  109 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRA  109 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHh
Confidence            99999999999999999964

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.78  E-value=3.4e-08  Score=100.49  Aligned_cols=89  Identities=27%  Similarity=0.425  Sum_probs=75.4

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++... +++.+|+|.++.... .....+.+|+.++++++|+|++++.+++......++|+||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            56777789999999999999975 488999999874422 2335678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ ++|.+++..
T Consensus        85 ~~-~~l~~~~~~   95 (303)
T cd07869          85 VH-TDLCQYMDK   95 (303)
T ss_pred             CC-cCHHHHHHh
Confidence            95 788888754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.78  E-value=2.1e-08  Score=102.32  Aligned_cols=91  Identities=26%  Similarity=0.486  Sum_probs=76.6

Q ss_pred             ccccccceecccCceeEEEEEecC--------CcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE--------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~--------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      ++|...+.||+|+||.||++....        ...+|+|.++... .....++..|+.++.++ +|+||+++++++....
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            467777899999999999987421        3469999987542 33456788999999999 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcCC
Q 008046          543 ESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ..++|+||+++|+|.++|...
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.78  E-value=2.3e-08  Score=99.40  Aligned_cols=88  Identities=25%  Similarity=0.477  Sum_probs=75.5

Q ss_pred             ccccceecccCceeEEEEEe-cCCcEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      |...+.||+|+||.||++.. .+++.+|+|.+.....      ...+.+.+|+.++++++|+|++++++++...+..++|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            55667999999999999985 4588999999864321      1246789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++++|.+++.+
T Consensus        82 ~e~~~~~~L~~~l~~   96 (268)
T cd06630          82 VEWMAGGSVSHLLSK   96 (268)
T ss_pred             EeccCCCcHHHHHHH
Confidence            999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.78  E-value=2.5e-08  Score=100.98  Aligned_cols=90  Identities=28%  Similarity=0.497  Sum_probs=78.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++... ++..+|+|.+........+.+.+|+.++++++|||++++.+.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            45667789999999999999854 57889999986544444568899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        99 ~~~~L~~~~~~  109 (293)
T cd06647          99 AGGSLTDVVTE  109 (293)
T ss_pred             CCCcHHHHHhh
Confidence            99999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.78  E-value=2.2e-08  Score=99.36  Aligned_cols=88  Identities=33%  Similarity=0.518  Sum_probs=74.7

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +|...++||+|+||.||++....+..+|+|.+.... ...+.|.+|+.++.+++|+|++++++++. ....+++|||+++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~   84 (260)
T cd05070           7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK   84 (260)
T ss_pred             HhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence            455567999999999999998778889999987542 23567999999999999999999999874 4567899999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      ++|.+++...
T Consensus        85 ~~L~~~~~~~   94 (260)
T cd05070          85 GSLLDFLKDG   94 (260)
T ss_pred             CcHHHHHHhc
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.77  E-value=7.8e-09  Score=101.13  Aligned_cols=89  Identities=21%  Similarity=0.404  Sum_probs=71.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQ--GMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV  547 (579)
                      +.|...+.|++|.||.||+|+.+. ++.||+|+++.....  -.-.-++|+.++.+++|||||.+..+...  -+..|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            456666899999999999999654 889999999754211  12245799999999999999999887765  3569999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      ||||++ +|..+|..
T Consensus       156 Me~~Eh-DLksl~d~  169 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMET  169 (419)
T ss_pred             HHHHHh-hHHHHHHh
Confidence            999986 88888853

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.77  E-value=3.1e-08  Score=100.94  Aligned_cols=89  Identities=16%  Similarity=0.293  Sum_probs=76.8

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.... ++.|++|.+....   ....+.+.+|+.++..++|+||+++++.+..+++.++|+|
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            56667899999999999999754 7889999987542   2334578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus        82 ~~~g~~L~~~l~~   94 (305)
T cd05609          82 YVEGGDCATLLKN   94 (305)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999999954

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.77  E-value=1.7e-09  Score=103.94  Aligned_cols=86  Identities=24%  Similarity=0.465  Sum_probs=77.3

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      |....+||+|+||.|||+.++. |+.+|||.+..  ..+.++...|+.+|.+.+.+++|+.+|-+.....++|||||+.-
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            5555799999999999999865 89999999874  35678999999999999999999999999888999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      ||..+.++-
T Consensus       113 GSiSDI~R~  121 (502)
T KOG0574|consen  113 GSISDIMRA  121 (502)
T ss_pred             CcHHHHHHH
Confidence            999999864

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.77  E-value=2.3e-08  Score=99.13  Aligned_cols=82  Identities=28%  Similarity=0.514  Sum_probs=68.6

Q ss_pred             eecccCceeEEEEEec---CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          480 KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      .||+|+||.||+|...   .+..||+|.+..... ...++|.+|+.++++++|+|++++++++. .+..++|+||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            5899999999999764   245799999875432 33467999999999999999999999875 457889999999999


Q ss_pred             HHHHhcC
Q 008046          556 LDFFIFD  562 (579)
Q Consensus       556 L~~~l~~  562 (579)
                      |.+++..
T Consensus        81 L~~~l~~   87 (257)
T cd05115          81 LNKFLSG   87 (257)
T ss_pred             HHHHHHh
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.77  E-value=3.5e-08  Score=99.50  Aligned_cols=88  Identities=30%  Similarity=0.464  Sum_probs=74.5

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++... +++.+|+|.+....   ......+.+|+.++.+++|+|++++.+.+..++..++|+||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            445578999999999999875 48899999986432   12234678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        82 ~~~~~L~~~~~~   93 (285)
T cd05632          82 MNGGDLKFHIYN   93 (285)
T ss_pred             ccCccHHHHHHH
Confidence            999999988864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.77  E-value=1.9e-08  Score=101.75  Aligned_cols=89  Identities=30%  Similarity=0.571  Sum_probs=76.4

Q ss_pred             cccccceecccCceeEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +|...+.||+|+||.||++...      +...+++|.+........+.+.+|+.++.+++|+|++++++++......++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV   85 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence            4566679999999999999742      2456899998765555557899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++++|.+++..
T Consensus        86 ~e~~~~~~L~~~i~~  100 (291)
T cd05094          86 FEYMKHGDLNKFLRA  100 (291)
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999999964

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.77  E-value=2.3e-08  Score=100.27  Aligned_cols=89  Identities=31%  Similarity=0.542  Sum_probs=74.9

Q ss_pred             ccccceecccCceeEEEEEec-----CCcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESML  546 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~l  546 (579)
                      |...+.||+|+||.||++.+.     .+..+|||.++..... ..+.|.+|+.++.+++|+|++++.+++..  +...++
T Consensus         6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05038           6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL   85 (284)
T ss_pred             chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence            444578999999999999864     2678999999755332 46789999999999999999999999877  557899


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++++|.+++...
T Consensus        86 v~e~~~~~~l~~~l~~~  102 (284)
T cd05038          86 IMEYLPSGSLRDYLQRH  102 (284)
T ss_pred             EEecCCCCCHHHHHHhC
Confidence            99999999999999653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.77  E-value=1.7e-08  Score=99.58  Aligned_cols=88  Identities=24%  Similarity=0.408  Sum_probs=76.2

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++.... +..+|+|.+...  .....+.+.+|+.+++.++|+|++++++.+......++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            5566799999999999999764 788999998643  2234567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~~~~   92 (257)
T cd08225          82 DGGDLMKRINR   92 (257)
T ss_pred             CCCcHHHHHHh
Confidence            99999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.77  E-value=2.9e-08  Score=100.01  Aligned_cols=92  Identities=29%  Similarity=0.455  Sum_probs=80.7

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .+++|...+.||+|+||.||++... .+..+++|.+..... ..+.+..|++++.+++|+|++++++.+......++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4566777789999999999999986 478999999975433 46789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++++|.+++...
T Consensus        96 ~~~~~~L~~~l~~~  109 (286)
T cd06614          96 YMDGGSLTDIITQN  109 (286)
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.76  E-value=3.9e-08  Score=99.83  Aligned_cols=90  Identities=27%  Similarity=0.509  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .+|...++||.|+||.||++.. .+++.|++|.+........+.+.+|+.+++.++|+|++++++.+...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            3577778999999999999985 458899999997554455678899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++.+
T Consensus        99 ~~~~L~~~~~~  109 (296)
T cd06655          99 AGGSLTDVVTE  109 (296)
T ss_pred             CCCcHHHHHHh
Confidence            99999998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.76  E-value=2.3e-08  Score=100.42  Aligned_cols=88  Identities=24%  Similarity=0.361  Sum_probs=71.8

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHH-HhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTL-IARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~-l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +|...+.||+|+||.||++... +|..||+|+++... ......+..|+.+ ++..+|+|++++++++......++|+||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            5667789999999999999975 48899999987542 2334566677765 5567899999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ |+|.+++..
T Consensus        82 ~~-~~l~~~l~~   92 (283)
T cd06617          82 MD-TSLDKFYKK   92 (283)
T ss_pred             hc-ccHHHHHHH
Confidence            96 789888865

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.76  E-value=2.4e-08  Score=99.65  Aligned_cols=89  Identities=24%  Similarity=0.422  Sum_probs=74.1

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc---c-------cHHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG---Q-------GMEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~---~-------~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      |...+.||+|+||.||+|... +++.+|+|.++....   .       ..+.+.+|+.++.+++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            345578999999999999864 488999998753211   0       13468899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcCC
Q 008046          544 SMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      .++|+||+++|+|.+++...
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~  102 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY  102 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc
Confidence            99999999999999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.76  E-value=3.6e-08  Score=97.37  Aligned_cols=88  Identities=27%  Similarity=0.589  Sum_probs=76.6

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      .|...+.||+|+||.||++...+++.+|+|.+... .....+|.+|++++.+++|+|++++++++......++|+||+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            44555799999999999998877889999998743 23356899999999999999999999999988999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      ++|.+++..
T Consensus        84 ~~L~~~~~~   92 (256)
T cd05112          84 GCLSDYLRA   92 (256)
T ss_pred             CcHHHHHHh
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.76  E-value=2.3e-08  Score=100.61  Aligned_cols=89  Identities=33%  Similarity=0.559  Sum_probs=74.4

Q ss_pred             cccccceecccCceeEEEEEec-----CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESM  545 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~  545 (579)
                      .|...++||+|+||.||.+.+.     .+..||+|.++... ....+.+.+|+.++++++|+|++++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            4566689999999999998742     36789999987542 33456899999999999999999999998775  5688


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++++|.+++..
T Consensus        85 lv~e~~~g~~L~~~l~~  101 (284)
T cd05079          85 LIMEFLPSGSLKEYLPR  101 (284)
T ss_pred             EEEEccCCCCHHHHHHh
Confidence            99999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.76  E-value=3.6e-08  Score=101.70  Aligned_cols=84  Identities=20%  Similarity=0.331  Sum_probs=71.1

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.+|+|.++..   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            379999999999999754 789999999753   223345678899888876 899999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 ~~L~~~~~~   89 (329)
T cd05618          81 GDLMFHMQR   89 (329)
T ss_pred             CCHHHHHHH
Confidence            999988754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.76  E-value=2.5e-08  Score=100.18  Aligned_cols=90  Identities=29%  Similarity=0.564  Sum_probs=77.1

Q ss_pred             cccccceecccCceeEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++...++||+|+||.||++...      ++..+|+|.+........+.|.+|++++..++|+||+++.+++......++|
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (280)
T cd05092           6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV   85 (280)
T ss_pred             hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence            4455579999999999999642      2557999998766555667899999999999999999999999988899999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.+++...
T Consensus        86 ~e~~~~~~L~~~i~~~  101 (280)
T cd05092          86 FEYMRHGDLNRFLRSH  101 (280)
T ss_pred             EecCCCCCHHHHHHhc
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.76  E-value=3.5e-08  Score=99.65  Aligned_cols=90  Identities=29%  Similarity=0.391  Sum_probs=77.2

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++... +++.+|+|.++...   ....+.+.+|++++++++|+|++++++.+..+...++|+|
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            4666789999999999999875 48899999986431   2335678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++++|.+++...
T Consensus        82 ~~~~~~L~~~~~~~   95 (290)
T cd05580          82 YVPGGELFSHLRKS   95 (290)
T ss_pred             cCCCCCHHHHHHHc
Confidence            99999999998643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.76  E-value=2.9e-08  Score=100.20  Aligned_cols=88  Identities=32%  Similarity=0.519  Sum_probs=74.1

Q ss_pred             ccccceecccCceeEEEEEecC------CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      |...+.||+|+||.||+|....      ...+++|.+..... ...+.+.+|+.++..++||||+++++.+...+..++|
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            4556789999999999998532      34689998875432 3356799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (290)
T cd05045          82 VEYAKYGSLRSFLRE   96 (290)
T ss_pred             EEecCCCCHHHHHHh
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.76  E-value=1.5e-08  Score=101.65  Aligned_cols=88  Identities=22%  Similarity=0.442  Sum_probs=75.0

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |+..+.||+|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++|+|++++++.+......++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            4445689999999999998654 7789999987442 3345689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +++|.+++..
T Consensus        86 ~~~L~~~~~~   95 (277)
T cd06642          86 GGSALDLLKP   95 (277)
T ss_pred             CCcHHHHhhc
Confidence            9999998854

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.75  E-value=2.6e-08  Score=100.09  Aligned_cols=90  Identities=34%  Similarity=0.661  Sum_probs=75.6

Q ss_pred             cccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      +|...+.||+|+||.||++....      ...+|+|.+.... .....+|.+|+.++.+++|+|++++++++......++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            45566799999999999998643      2579999987543 2334679999999999999999999999998889999


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      ++||+++|+|.++|...
T Consensus        86 ~~e~~~~~~L~~~l~~~  102 (283)
T cd05048          86 LFEYLAHGDLHEFLVRN  102 (283)
T ss_pred             EEecCCCCcHHHHHHhc
Confidence            99999999999999653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.75  E-value=4.3e-08  Score=100.04  Aligned_cols=89  Identities=27%  Similarity=0.447  Sum_probs=74.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++... .++.+|+|.++... ......+.+|+.++.+++|+|++++++++...+..++|+||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            45677789999999999999865 47789999987442 23345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ ++|.+++..
T Consensus        86 ~~-~~l~~~~~~   96 (309)
T cd07872          86 LD-KDLKQYMDD   96 (309)
T ss_pred             CC-CCHHHHHHh
Confidence            97 488888864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.75  E-value=2.5e-08  Score=101.60  Aligned_cols=91  Identities=29%  Similarity=0.550  Sum_probs=75.5

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc--EEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ--EIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++.... +.  .+|+|.++... ....+.|.+|+.++.++ +|+|++++.+++...+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            356666899999999999998653 43  46888776432 33456899999999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.+++...
T Consensus        87 ~e~~~~~~L~~~l~~~  102 (303)
T cd05088          87 IEYAPHGNLLDFLRKS  102 (303)
T ss_pred             EEeCCCCcHHHHHHhc
Confidence            9999999999999743

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.75  E-value=2.5e-08  Score=101.05  Aligned_cols=91  Identities=32%  Similarity=0.523  Sum_probs=76.2

Q ss_pred             ccccccceecccCceeEEEEEec-----------------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceece
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-----------------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKL  534 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-----------------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l  534 (579)
                      ++|+..++||+|+||.||++...                 ++..+|+|.+.... ....+.|.+|+.++.+++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            45777789999999999987532                 23468999987542 3345689999999999999999999


Q ss_pred             eEEEEECCeEEEEEeccCCCCHHHHhcCC
Q 008046          535 LGCCIQADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       535 ~g~~~~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++++...+..++|+||+++|+|.+++...
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRH  113 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhc
Confidence            99999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.75  E-value=2e-08  Score=103.27  Aligned_cols=83  Identities=27%  Similarity=0.471  Sum_probs=72.0

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      +.||+|.||+||-|.++. |+.||||.+.+.  ....+..+++|+.|+.+++||.||.|.-.|+..+..++|||-+ +|+
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~GD  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HGD  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cch
Confidence            789999999999999865 999999999755  3345678999999999999999999999999999999999999 567


Q ss_pred             HHHHhcC
Q 008046          556 LDFFIFD  562 (579)
Q Consensus       556 L~~~l~~  562 (579)
                      ..+.|..
T Consensus       649 MLEMILS  655 (888)
T KOG4236|consen  649 MLEMILS  655 (888)
T ss_pred             HHHHHHH
Confidence            6555543

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.75  E-value=4e-08  Score=100.79  Aligned_cols=84  Identities=26%  Similarity=0.372  Sum_probs=70.6

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.||+|.++...   ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            379999999999999754 7889999997531   23345677788888764 899999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        81 g~L~~~l~~   89 (316)
T cd05619          81 GDLMFHIQS   89 (316)
T ss_pred             CcHHHHHHH
Confidence            999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.75  E-value=1.2e-08  Score=111.54  Aligned_cols=90  Identities=29%  Similarity=0.469  Sum_probs=75.6

Q ss_pred             ccccccceecccCceeEEEEEecCC-cEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEE-EEEC------Ce
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEG-QEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGC-CIQA------DE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~-~~~~------~~  543 (579)
                      .+....+.|.+|||+.||.+....+ ..+|+|++-...+...+...+|+.+|++|. |+|||.+++. ....      -+
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            3455667999999999999998775 999999997666777889999999999996 9999999983 2221      26


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .+|.||||++|+|-+|+..
T Consensus       117 vllLmEyC~gg~Lvd~mn~  135 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNT  135 (738)
T ss_pred             EEeehhhccCCcHHHHHHH
Confidence            7899999999999999964

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.75  E-value=2.7e-08  Score=98.10  Aligned_cols=88  Identities=26%  Similarity=0.459  Sum_probs=77.9

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++...+ +..+++|.+.....  .+++.+|++++++++|+|++++++.+......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            456777899999999999999765 78999999875422  678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        81 ~~~~L~~~l~~   91 (256)
T cd06612          81 GAGSVSDIMKI   91 (256)
T ss_pred             CCCcHHHHHHh
Confidence            99999999854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.75  E-value=4.7e-08  Score=96.90  Aligned_cols=90  Identities=30%  Similarity=0.508  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...+.||+|++|.||++... .++.+|+|.+....     ....+.+.+|+.++.+++|+||+++++++...+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46777889999999999999864 48899999986431     1224578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++++|.+++..
T Consensus        82 v~e~~~~~~l~~~~~~   97 (263)
T cd06625          82 FMEYMPGGSVKDQLKA   97 (263)
T ss_pred             EEEECCCCcHHHHHHH
Confidence            9999999999998854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.75  E-value=1.5e-08  Score=101.91  Aligned_cols=89  Identities=25%  Similarity=0.406  Sum_probs=75.6

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +|...++||+|+||.||++...+ ++.+|+|++....  ....+.+.+|++++..++|+|++++++++......++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            46666899999999999999764 7899999886432  22345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|..+...
T Consensus        82 ~~~~~l~~~~~~   93 (286)
T cd07846          82 VDHTVLDDLEKY   93 (286)
T ss_pred             CCccHHHHHHhc
Confidence            999998887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.75  E-value=4.4e-08  Score=98.33  Aligned_cols=82  Identities=24%  Similarity=0.381  Sum_probs=69.6

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++.... |+.+|+|.+....   ....+.+..|++++.+++|||++++.+.+..+.+.++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999998754 8899999986421   12234567799999999999999999999999999999999999999


Q ss_pred             HHHhcC
Q 008046          557 DFFIFD  562 (579)
Q Consensus       557 ~~~l~~  562 (579)
                      .+++..
T Consensus        81 ~~~~~~   86 (277)
T cd05607          81 KYHIYN   86 (277)
T ss_pred             HHHHHh
Confidence            988864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.74  E-value=3.5e-08  Score=101.53  Aligned_cols=87  Identities=28%  Similarity=0.431  Sum_probs=70.9

Q ss_pred             cccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHH---hcCCCCceeceeEEEEECCeEEEEE
Q 008046          476 ASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLI---ARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l---~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ...+.||+|+||.||++... .++.||||.++..   .....+.+..|++++   .+++||||+++++++...+..++||
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~   81 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM   81 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence            34578999999999999865 4889999999743   122345677776655   5678999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|..++..
T Consensus        82 E~~~~~~L~~~~~~   95 (324)
T cd05589          82 EYAAGGDLMMHIHT   95 (324)
T ss_pred             cCCCCCcHHHHhhc
Confidence            99999999988754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.74  E-value=4.6e-08  Score=97.79  Aligned_cols=89  Identities=21%  Similarity=0.366  Sum_probs=76.9

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||.|+||.||++... +++.+|+|.+.... ......+.+|+.++++++|+|++++.+++......++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            4555678999999999999965 47899999987542 344568899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~~~~   92 (274)
T cd06609          82 GGGSCLDLLKP   92 (274)
T ss_pred             CCCcHHHHHhh
Confidence            99999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.74  E-value=2.9e-08  Score=100.41  Aligned_cols=91  Identities=33%  Similarity=0.486  Sum_probs=76.7

Q ss_pred             ccccccceecccCceeEEEEEecC-----------------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceece
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-----------------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKL  534 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l  534 (579)
                      .+|...++||+|+||.||++....                 +..||+|.+.... ....++|.+|++++.+++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            456666899999999999987543                 2458999987543 3346789999999999999999999


Q ss_pred             eEEEEECCeEEEEEeccCCCCHHHHhcCC
Q 008046          535 LGCCIQADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       535 ~g~~~~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++++......++|+||+++++|.++|...
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKH  113 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhc
Confidence            99999989999999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.74  E-value=2.6e-08  Score=99.21  Aligned_cols=88  Identities=24%  Similarity=0.427  Sum_probs=72.7

Q ss_pred             ccccceecccCceeEEEEEecC--CcEEEEEEecCC----------CcccHHHHHHHHHHHhc-CCCCceeceeEEEEEC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE--GQEIAVKRLSKG----------SGQGMEEFKNEVTLIAR-LQHRNLVKLLGCCIQA  541 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~--g~~vAvK~l~~~----------~~~~~~~f~~E~~~l~~-l~H~nlv~l~g~~~~~  541 (579)
                      |...+.||+|+||.||++....  +..+|+|.+...          ......++.+|+.++.+ ++|+|++++++++...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5556789999999999999765  678999987532          11234567889988875 7999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhcC
Q 008046          542 DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +..++|+||+++++|.+++..
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~  102 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNS  102 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHH
Confidence            999999999999999998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.74  E-value=2.1e-08  Score=100.97  Aligned_cols=89  Identities=21%  Similarity=0.368  Sum_probs=76.6

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|+||.||++... .+..+|+|.+... .......+.+|+.++.+++|+|++++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            3455578999999999999975 5889999988743 2333468999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|..++..
T Consensus        82 ~~~~l~~~~~~   92 (286)
T cd06622          82 DAGSLDKLYAG   92 (286)
T ss_pred             CCCCHHHHHHh
Confidence            99999998865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.74  E-value=3.9e-08  Score=101.02  Aligned_cols=84  Identities=27%  Similarity=0.384  Sum_probs=71.1

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ++||+|+||.||++.... ++.+|+|.++..   .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            368999999999998754 789999998743   223345688899988866 799999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 ~~L~~~l~~   89 (321)
T cd05591          81 GDLMFQIQR   89 (321)
T ss_pred             CcHHHHHHH
Confidence            999988864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.73  E-value=3.9e-08  Score=97.99  Aligned_cols=88  Identities=32%  Similarity=0.560  Sum_probs=72.6

Q ss_pred             cccceecccCceeEEEEEecC----CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe------
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE------  543 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~------  543 (579)
                      ...+.||+|+||.||++....    +..+|+|.++..  .....+.+.+|+..+..++|+|++++++++...+.      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            345789999999999998743    367999998743  22345689999999999999999999999876554      


Q ss_pred             EEEEEeccCCCCHHHHhcCC
Q 008046          544 SMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      .++|+||+++|+|..++...
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~  101 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYS  101 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHh
Confidence            78999999999999998653

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.73  E-value=6.5e-08  Score=95.77  Aligned_cols=91  Identities=23%  Similarity=0.490  Sum_probs=79.8

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++.... +..+++|.+........+.+.+|+.++.+++|+|+++++++.......++++||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            456777899999999999998754 7789999997655556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        83 ~~~~l~~~~~~~   94 (262)
T cd06613          83 GGGSLQDIYQVT   94 (262)
T ss_pred             CCCcHHHHHHhh
Confidence            999999988653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.73  E-value=4.8e-08  Score=96.17  Aligned_cols=84  Identities=35%  Similarity=0.599  Sum_probs=74.6

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHH
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      ++||+|+||.||++...+++.||+|.+...... ..+.|.+|+.++.+++|+||+++++++......++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            378999999999999877899999998754332 4568999999999999999999999999999999999999999999


Q ss_pred             HHhcC
Q 008046          558 FFIFD  562 (579)
Q Consensus       558 ~~l~~  562 (579)
                      +++..
T Consensus        81 ~~l~~   85 (251)
T cd05041          81 TFLRK   85 (251)
T ss_pred             HHHHh
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.73  E-value=5.7e-08  Score=96.61  Aligned_cols=90  Identities=27%  Similarity=0.449  Sum_probs=73.8

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~  544 (579)
                      .+|...+.||+|+||.||++...+ +..||+|.+....     ....+.+.+|+.++.+++|+||+++.+++...  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            356777899999999999998754 8899999885321     12345788999999999999999999987663  457


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++++|.+++..
T Consensus        82 ~~v~e~~~~~~L~~~l~~   99 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKS   99 (265)
T ss_pred             EEEEEecCCCcHHHHHHH
Confidence            899999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=8.9e-09  Score=107.34  Aligned_cols=87  Identities=30%  Similarity=0.500  Sum_probs=76.6

Q ss_pred             ccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      |..-.+||+|+-|.||.+.- ..++.||||++........+-.++|+.+|+..+|+|||+++.-+...+++++|||||++
T Consensus       275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g  354 (550)
T KOG0578|consen  275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG  354 (550)
T ss_pred             hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence            45556899999999999984 45789999999876666667789999999999999999999988888999999999999


Q ss_pred             CCHHHHhc
Q 008046          554 KSLDFFIF  561 (579)
Q Consensus       554 GsL~~~l~  561 (579)
                      |+|.+.+.
T Consensus       355 gsLTDvVt  362 (550)
T KOG0578|consen  355 GSLTDVVT  362 (550)
T ss_pred             Cchhhhhh
Confidence            99998875

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.73  E-value=6.5e-08  Score=95.82  Aligned_cols=89  Identities=22%  Similarity=0.325  Sum_probs=78.7

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|++|.||++.... ++.+++|++..... ...+.+.+|+..+.+++|+|++++.+++......++|+||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            46666899999999999999765 88999999875533 34678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~l~~   92 (264)
T cd06623          82 DGGSLADLLKK   92 (264)
T ss_pred             CCCcHHHHHHH
Confidence            99999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.72  E-value=2.9e-08  Score=99.05  Aligned_cols=88  Identities=25%  Similarity=0.436  Sum_probs=73.0

Q ss_pred             cccccceecccCceeEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +|...++||+|+||.||+|...+    ...||+|...... .+..+.|.+|+.++.+++|+|++++++++.. +..++|+
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~   85 (270)
T cd05056           7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM   85 (270)
T ss_pred             hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence            45666799999999999998643    2468999887543 3445689999999999999999999998864 5678999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        86 e~~~~~~L~~~l~~   99 (270)
T cd05056          86 ELAPLGELRSYLQV   99 (270)
T ss_pred             EcCCCCcHHHHHHh
Confidence            99999999999964

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.72  E-value=3.9e-08  Score=101.01  Aligned_cols=84  Identities=30%  Similarity=0.437  Sum_probs=71.3

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.||+|.++..   .....+.+..|..++..+ +|+|++++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            378999999999999754 789999998743   223456778899888876 699999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        81 g~L~~~i~~   89 (320)
T cd05590          81 GDLMFHIQK   89 (320)
T ss_pred             chHHHHHHH
Confidence            999988864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.72  E-value=3e-08  Score=98.06  Aligned_cols=85  Identities=32%  Similarity=0.475  Sum_probs=72.9

Q ss_pred             ceecccCceeEEEEEecC--C--cEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE--G--QEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~--g--~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ++||+|++|.||++....  +  ..+|+|.+..... ...+.|.+|+.++.+++|+|++++++.+.. ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998643  2  3699999986644 456789999999999999999999999887 889999999999


Q ss_pred             CCHHHHhcCCC
Q 008046          554 KSLDFFIFDID  564 (579)
Q Consensus       554 GsL~~~l~~~~  564 (579)
                      |+|.+++.+..
T Consensus        80 ~~L~~~l~~~~   90 (257)
T cd05040          80 GSLLDRLRKDA   90 (257)
T ss_pred             CcHHHHHHhcc
Confidence            99999997643

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.72  E-value=6.2e-08  Score=96.03  Aligned_cols=89  Identities=27%  Similarity=0.487  Sum_probs=77.5

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++... +++.+++|.++....  ...+.+..|+.++++++|+||+++++.+...+..++|+||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            455679999999999999865 578999999875533  25678999999999999999999999999899999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (264)
T cd06626          82 SGGTLEELLEHG   93 (264)
T ss_pred             CCCcHHHHHhhc
Confidence            999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.72  E-value=7.8e-08  Score=94.99  Aligned_cols=88  Identities=24%  Similarity=0.332  Sum_probs=75.6

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |...++||+|+||.||++... .++.+|+|.++.. .....+.+..|+.++.+++|+|++++.+.+......++|+||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            455679999999999999865 4788999998643 23345678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        82 ~~~l~~~~~~   91 (255)
T cd08219          82 GGDLMQKIKL   91 (255)
T ss_pred             CCcHHHHHHh
Confidence            9999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.72  E-value=3.5e-08  Score=99.98  Aligned_cols=88  Identities=28%  Similarity=0.449  Sum_probs=74.7

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCcc-----cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ-----GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      |...+.||+|+||.||+|... +++.||+|.+......     ....+..|+.++.+++|+|++++++++...+..++|+
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            455678999999999999965 4889999999754322     2346788999999999999999999999989999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+ +|+|.+++...
T Consensus        82 e~~-~~~L~~~i~~~   95 (298)
T cd07841          82 EFM-ETDLEKVIKDK   95 (298)
T ss_pred             ccc-CCCHHHHHhcc
Confidence            999 99999999653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.72  E-value=5.1e-08  Score=97.90  Aligned_cols=89  Identities=31%  Similarity=0.531  Sum_probs=75.3

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...++||+|++|.||++... ++..+|+|.++.... ...+.+..|+.++.+++|+|++++++++...+..++|+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            3566689999999999999975 488999999875432 33467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      + |+|.+++...
T Consensus        81 ~-~~l~~~~~~~   91 (284)
T cd07836          81 D-KDLKKYMDTH   91 (284)
T ss_pred             C-ccHHHHHHhc
Confidence            8 5898888653

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.72  E-value=3.8e-08  Score=98.75  Aligned_cols=89  Identities=30%  Similarity=0.581  Sum_probs=74.1

Q ss_pred             cccccceecccCceeEEEEEecC-Cc----EEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .|...+.||+|+||.||++...+ +.    .+|+|.+..... ....++.+|+.++.+++|+|+++++++|.. ...++|
T Consensus         8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v   86 (279)
T cd05057           8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI   86 (279)
T ss_pred             HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence            45556799999999999998643 32    589998875532 345689999999999999999999999987 788999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.+++...
T Consensus        87 ~e~~~~g~L~~~l~~~  102 (279)
T cd05057          87 TQLMPLGCLLDYVRNH  102 (279)
T ss_pred             EecCCCCcHHHHHHhc
Confidence            9999999999999653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.72  E-value=2.3e-08  Score=113.91  Aligned_cols=93  Identities=18%  Similarity=0.320  Sum_probs=77.2

Q ss_pred             HhcccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADES  544 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~  544 (579)
                      ...+.|...++||+|+||.||++.... +..+|+|.+...  .......|..|+.++.+++|||||++++++..  ....
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            344678888899999999999999754 678999988643  22345679999999999999999999998754  3568


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      +|||||+++|+|.++|..
T Consensus        90 yIVMEY~~gGSL~~lL~k  107 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQK  107 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999999864

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.72  E-value=5.9e-08  Score=95.84  Aligned_cols=88  Identities=22%  Similarity=0.373  Sum_probs=76.0

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |+..+.||+|+||.+|++... +++.+|+|++...  .....+++.+|+.++++++|+|++++.+++...+..++|+||+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            556689999999999999864 4789999998643  2334568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~l~~~~~~   92 (256)
T cd08218          82 EGGDLYKKINA   92 (256)
T ss_pred             CCCcHHHHHHh
Confidence            99999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.72  E-value=1.5e-08  Score=100.93  Aligned_cols=84  Identities=40%  Similarity=0.679  Sum_probs=71.9

Q ss_pred             ceecccCceeEEEEEecC-------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          479 NKLGEGGFGPVYKGTLVE-------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.||+|+||.||++...+       +..+|+|.+.... .....+|.+|+.+++.++|+||+++++++...+..++|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998643       2578999886542 23456899999999999999999999999988899999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++.+
T Consensus        81 ~~~~~L~~~l~~   92 (269)
T cd05044          81 MEGGDLLSYLRD   92 (269)
T ss_pred             cCCCcHHHHHHH
Confidence            999999999975

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.72  E-value=7.2e-08  Score=96.86  Aligned_cols=89  Identities=26%  Similarity=0.441  Sum_probs=75.2

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +|...+.||+|+||.||++.... ++.+|+|++....  ....+.+.+|+.++.+++|+|++++++++......++|+||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            45666799999999999999764 8899999986432  22345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++++.|..++..
T Consensus        82 ~~~~~l~~~~~~   93 (286)
T cd07847          82 CDHTVLNELEKN   93 (286)
T ss_pred             cCccHHHHHHhC
Confidence            999888887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.72  E-value=4.8e-08  Score=100.26  Aligned_cols=85  Identities=29%  Similarity=0.397  Sum_probs=71.9

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.+|+|.++..   .......+..|..++..+ +|+||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999998754 789999999743   223345678899998887 799999999999999999999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |+|..++...
T Consensus        81 ~~L~~~~~~~   90 (318)
T cd05570          81 GDLMFHIQRS   90 (318)
T ss_pred             CCHHHHHHHc
Confidence            9999888643

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.71  E-value=4.1e-08  Score=96.88  Aligned_cols=85  Identities=38%  Similarity=0.663  Sum_probs=74.7

Q ss_pred             ceecccCceeEEEEEecC----CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++....    +..+++|.++..... ..+.+.+|+.++..++|+|++++++++......++|+||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            378999999999999754    778999999765333 367899999999999999999999999998999999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      ++|.+++...
T Consensus        81 ~~L~~~l~~~   90 (262)
T cd00192          81 GDLLDYLRKS   90 (262)
T ss_pred             CcHHHHHhhc
Confidence            9999999764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.71  E-value=5.2e-08  Score=100.07  Aligned_cols=84  Identities=26%  Similarity=0.352  Sum_probs=68.7

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHH-HHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVT-LIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.+|+|.+....   ......+..|.. ++..++|+||+++++.+...+..++|+||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999999754 7899999986431   122345666654 57789999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 ~~L~~~l~~   89 (321)
T cd05603          81 GELFFHLQR   89 (321)
T ss_pred             CCHHHHHHH
Confidence            999888854

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.71  E-value=6.8e-08  Score=95.28  Aligned_cols=88  Identities=19%  Similarity=0.358  Sum_probs=76.1

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++... .++.+|+|.+...  .....+.+.+|+.++++++|+|++++++.....+..++|+||+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            455679999999999999864 4788999998643  2334568999999999999999999999998889999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~~~~   92 (256)
T cd08220          82 PGGTLAEYIQK   92 (256)
T ss_pred             CCCCHHHHHHH
Confidence            99999999965

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.71  E-value=4.7e-08  Score=96.95  Aligned_cols=88  Identities=30%  Similarity=0.440  Sum_probs=74.0

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +|...++||+|+||.||++....+..+|+|.+.... ...+.|.+|+.++.+++|+|++++.+++. .+..++||||+++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~   84 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK   84 (260)
T ss_pred             HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence            455667999999999999998777789999886432 33467999999999999999999998874 5568899999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |+|.+++...
T Consensus        85 ~~L~~~~~~~   94 (260)
T cd05069          85 GSLLDFLKEG   94 (260)
T ss_pred             CCHHHHHhhC
Confidence            9999999653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.71  E-value=8.3e-08  Score=95.42  Aligned_cols=88  Identities=31%  Similarity=0.549  Sum_probs=73.8

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCcc---------cHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ---------GMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~---------~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      |.....||+|+||.||+|... .++.+|+|.+......         ..+.+.+|+.++.+++|+|++++.+++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            344568999999999999864 4788999988643221         124688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++++|.+++..
T Consensus        82 ~lv~e~~~~~~L~~~l~~   99 (267)
T cd06628          82 NIFLEYVPGGSVAALLNN   99 (267)
T ss_pred             EEEEEecCCCCHHHHHHh
Confidence            999999999999999954

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.71  E-value=7.8e-08  Score=97.72  Aligned_cols=90  Identities=28%  Similarity=0.455  Sum_probs=75.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.|...++||+|+||.||++... .+..||+|.++... ......+.+|+.++.+++|+||+++++++......++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            35667789999999999999875 47889999987442 23345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      ++ ++|.+++...
T Consensus        86 ~~-~~l~~~l~~~   97 (301)
T cd07873          86 LD-KDLKQYLDDC   97 (301)
T ss_pred             cc-cCHHHHHHhc
Confidence            97 6899888653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.71  E-value=5.8e-08  Score=99.56  Aligned_cols=84  Identities=26%  Similarity=0.362  Sum_probs=69.1

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhc-CCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIAR-LQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~-l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.||+|.++..   .....+.+..|..++.. .+||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999999754 788999999743   12334556677777765 4899999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 g~L~~~~~~   89 (316)
T cd05592          81 GDLMFHIQS   89 (316)
T ss_pred             CcHHHHHHH
Confidence            999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.70  E-value=9.8e-08  Score=94.69  Aligned_cols=89  Identities=22%  Similarity=0.405  Sum_probs=77.7

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|+||.||++... ++..+|+|++.... ....+.+.+|+.+++.++|+|++++.+.+...+..++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            5667789999999999999964 47889999987432 235678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~l~~~~~~   92 (267)
T cd06610          82 SGGSLLDIMKS   92 (267)
T ss_pred             CCCcHHHHHHH
Confidence            99999999965

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.70  E-value=3.6e-08  Score=98.18  Aligned_cols=92  Identities=26%  Similarity=0.413  Sum_probs=77.7

Q ss_pred             HhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECC-----
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD-----  542 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~-----  542 (579)
                      .++++|...+.||+|+||.||++... .++.+++|.+.... ...+.|.+|+.++.++ +|+|++++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            35678888899999999999999975 47789999987543 3346899999999998 7999999999997644     


Q ss_pred             -eEEEEEeccCCCCHHHHhcC
Q 008046          543 -ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 -~~~lV~Ey~~~GsL~~~l~~  562 (579)
                       ..++|+||+++++|.+++..
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~  102 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKG  102 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHH
Confidence             48999999999999999865

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.70  E-value=4.3e-08  Score=96.69  Aligned_cols=87  Identities=41%  Similarity=0.678  Sum_probs=75.7

Q ss_pred             ccceecccCceeEEEEEecC-----CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          477 SYNKLGEGGFGPVYKGTLVE-----GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~-----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ..+.||+|+||.||++...+     +..+|+|.+...... ..+.+..|+.++..++|+|++++++.+...+..++++||
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            44689999999999999754     378999999755333 567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++++|.+++...
T Consensus        83 ~~~~~l~~~~~~~   95 (258)
T smart00219       83 MEGGDLLDYLRKN   95 (258)
T ss_pred             cCCCCHHHHHHhh
Confidence            9999999998653

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.70  E-value=2.9e-08  Score=98.29  Aligned_cols=89  Identities=20%  Similarity=0.310  Sum_probs=77.1

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++.... +..+|+|.+....   ....+.+.+|++++++++|||++++++.+..+...++|+||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            5566899999999999999764 8899999997432   23457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++++|.+++...
T Consensus        82 ~~~~~L~~~l~~~   94 (258)
T cd05578          82 LLGGDLRYHLSQK   94 (258)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999998643

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.70  E-value=4.6e-08  Score=99.56  Aligned_cols=91  Identities=27%  Similarity=0.508  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      ++|...+.||+|+||.||++...        ++..+|+|.+.... ....+++.+|+.++..+ +|+||+++++++....
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   94 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   94 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence            45667789999999999999741        24579999987432 34456899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcCC
Q 008046          543 ESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ..++|+||+++|+|.++|...
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          95 PLYVIVEYASKGNLREYLRAR  115 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.70  E-value=6.6e-08  Score=99.43  Aligned_cols=84  Identities=26%  Similarity=0.367  Sum_probs=68.8

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHH-HHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVT-LIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++... +++.||+|.+....   ....+++..|.. ++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            37999999999999975 48899999986431   222345666655 45779999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 g~L~~~l~~   89 (323)
T cd05575          81 GELFFHLQR   89 (323)
T ss_pred             CCHHHHHHh
Confidence            999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.70  E-value=6.9e-08  Score=99.32  Aligned_cols=88  Identities=25%  Similarity=0.312  Sum_probs=73.0

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCC-CceeceeEEEEECCeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH-RNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H-~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      |...+.||+|+||.||++.... ++.+|+|.+...   .....+.+..|++++..++| ++++++.+++...+..++|||
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            5566899999999999998754 678999998743   22345678899999999865 568888888888899999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~~g~L~~~~~~   94 (324)
T cd05587          82 YVNGGDLMYHIQQ   94 (324)
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999998854

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.69  E-value=7.6e-08  Score=99.20  Aligned_cols=84  Identities=21%  Similarity=0.319  Sum_probs=71.4

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.+|+|.++...   ....+.+..|+.++.++ +|+|++++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            379999999999999754 7889999997532   23345688999999888 699999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 ~~L~~~~~~   89 (327)
T cd05617          81 GDLMFHMQR   89 (327)
T ss_pred             CcHHHHHHH
Confidence            999988854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.69  E-value=8.2e-08  Score=96.08  Aligned_cols=88  Identities=24%  Similarity=0.514  Sum_probs=75.3

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCC---CCceeceeEEEEECCeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQ---HRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~---H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      |+..+.||+|+||.||++... ++..+|+|.+... .....+++.+|+.++++++   |+|++++++++......++|+|
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            455578999999999999964 5889999998654 2344567899999999986   9999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus        83 ~~~~~~L~~~~~~   95 (277)
T cd06917          83 YAEGGSVRTLMKA   95 (277)
T ss_pred             cCCCCcHHHHHHc
Confidence            9999999998854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.69  E-value=3.4e-08  Score=106.52  Aligned_cols=92  Identities=20%  Similarity=0.401  Sum_probs=69.1

Q ss_pred             hcccccccceecccCceeEEEEEe-----------------cCCcEEEEEEecCCCcccHHHH--------------HHH
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTL-----------------VEGQEIAVKRLSKGSGQGMEEF--------------KNE  519 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~-----------------~~g~~vAvK~l~~~~~~~~~~f--------------~~E  519 (579)
                      ..++|...++||+|+||.||+|..                 ..++.||||++........++|              ..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            456888889999999999999964                 2256799999875433323334              446


Q ss_pred             HHHHhcCCCCce-----eceeEEEEE--------CCeEEEEEeccCCCCHHHHhcC
Q 008046          520 VTLIARLQHRNL-----VKLLGCCIQ--------ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       520 ~~~l~~l~H~nl-----v~l~g~~~~--------~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +.++.+++|.++     ++++++|..        ....+|||||+++|+|.++|+.
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence            677777776654     677888754        3468999999999999999975

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.68  E-value=1.3e-07  Score=95.01  Aligned_cols=87  Identities=31%  Similarity=0.505  Sum_probs=74.0

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|++|.||++... .+..||+|.++...  ....+.+.+|+.++.+++|+|++++++++..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            555678999999999999975 48899999986432  223467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      + ++|.+++..
T Consensus        82 ~-~~l~~~~~~   91 (285)
T cd07861          82 S-MDLKKYLDS   91 (285)
T ss_pred             C-CCHHHHHhc
Confidence            7 789888854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.68  E-value=4.9e-08  Score=99.90  Aligned_cols=90  Identities=29%  Similarity=0.521  Sum_probs=75.3

Q ss_pred             ccccccceecccCceeEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      ++|...++||+|+||.||++...        ....+|+|.++... .....++..|+.++.++ +|+||+++++++....
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            45666789999999999998742        24569999987542 23456789999999999 6999999999999888


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..++|+||+++|+|.+++..
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~  111 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRA  111 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHh
Confidence            99999999999999999965

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.68  E-value=1.5e-08  Score=90.74  Aligned_cols=84  Identities=25%  Similarity=0.446  Sum_probs=68.9

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ...++||+|.||+|||++..+ ++.||+|+++..  .+.-...-++|+-+++.++|+|||+++........+-+|+||+.
T Consensus         5 dkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd   84 (292)
T KOG0662|consen    5 DKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_pred             HHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh
Confidence            344689999999999999655 788999998743  22334678999999999999999999999888889999999994


Q ss_pred             CCCHHHHh
Q 008046          553 NKSLDFFI  560 (579)
Q Consensus       553 ~GsL~~~l  560 (579)
                       .+|..|.
T Consensus        85 -qdlkkyf   91 (292)
T KOG0662|consen   85 -QDLKKYF   91 (292)
T ss_pred             -HHHHHHH
Confidence             4666554

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.68  E-value=9.1e-08  Score=96.57  Aligned_cols=89  Identities=28%  Similarity=0.472  Sum_probs=75.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|++|.||++... +++.+|+|.+..... .....+.+|+.++.+++|+||+++++++...+..++|+||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            45667789999999999999975 478999999864322 2234678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ ++|.+++..
T Consensus        85 ~~-~~L~~~~~~   95 (291)
T cd07844          85 LD-TDLKQYMDD   95 (291)
T ss_pred             CC-CCHHHHHHh
Confidence            97 599998864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.68  E-value=5.2e-08  Score=96.41  Aligned_cols=89  Identities=22%  Similarity=0.427  Sum_probs=73.1

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV~E  549 (579)
                      |...+.||+|+||.||++... ++..+|+|.+...  .....+.+..|+.++++++|+|++++++++..  +...++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            445578999999999999864 4788999998643  23345678999999999999999999997754  456789999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++++|.+++...
T Consensus        82 ~~~~~~L~~~l~~~   95 (265)
T cd08217          82 YCEGGDLAQLIQKC   95 (265)
T ss_pred             hccCCCHHHHHHHH
Confidence            99999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.68  E-value=8.7e-08  Score=94.23  Aligned_cols=89  Identities=26%  Similarity=0.460  Sum_probs=77.2

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV~E  549 (579)
                      |...+.||+|++|.||++... ++..+++|.+.....  ...+.+.+|+.++++++|+|++++++.+...  ...++|+|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            455679999999999999976 588999999875432  4467899999999999999999999999888  88999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++++|.+++...
T Consensus        82 ~~~~~~L~~~~~~~   95 (260)
T cd06606          82 YVSGGSLSSLLKKF   95 (260)
T ss_pred             ecCCCcHHHHHHHc
Confidence            99999999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.68  E-value=2.5e-08  Score=103.34  Aligned_cols=91  Identities=26%  Similarity=0.354  Sum_probs=77.5

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~  545 (579)
                      ..++|.-.+.||+|+|.+|++++-.+ ++++|||++.+.   .+...+-...|-.+|.+| .||.+++|+--+.....+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            34567777899999999999998654 889999999754   233445677888999999 8999999999898899999


Q ss_pred             EEEeccCCCCHHHHhc
Q 008046          546 LIYEYMPNKSLDFFIF  561 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~  561 (579)
                      .|+||++||+|.++|.
T Consensus       151 FvLe~A~nGdll~~i~  166 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIK  166 (604)
T ss_pred             EEEEecCCCcHHHHHH
Confidence            9999999999999986

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.68  E-value=5.6e-08  Score=98.62  Aligned_cols=90  Identities=28%  Similarity=0.515  Sum_probs=75.2

Q ss_pred             ccccccceecccCceeEEEEEecC-C--cEEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-G--QEIAVKRLSKG-SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g--~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++...+ +  ..+++|.++.. .....+.|.+|+.++.++ +|||++++++++......++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            356666799999999999998754 3  24788888743 233456899999999999 799999999999988899999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (297)
T cd05089          82 IEYAPYGNLLDFLRK   96 (297)
T ss_pred             EEecCCCcHHHHHHh
Confidence            999999999999964

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.68  E-value=7e-08  Score=96.96  Aligned_cols=88  Identities=26%  Similarity=0.398  Sum_probs=75.9

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++... ++..+|+|.+....  ....+.+.+|+.++.+++|+|++++++++..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            455678999999999999965 58899999987543  233568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                       +++|.+++...
T Consensus        82 -~~~L~~~~~~~   92 (286)
T cd07832          82 -PSDLSEVLRDE   92 (286)
T ss_pred             -CCCHHHHHHhc
Confidence             99999998653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.68  E-value=7.1e-08  Score=96.29  Aligned_cols=84  Identities=31%  Similarity=0.600  Sum_probs=71.4

Q ss_pred             ceecccCceeEEEEEecC-Cc--EEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQ--EIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++...+ +.  .+++|.++... ....+.+.+|+.++.++ +|||++++++++...+..++|+||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999754 33  47888887432 33456899999999999 899999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        81 ~~L~~~i~~   89 (270)
T cd05047          81 GNLLDFLRK   89 (270)
T ss_pred             CcHHHHHHh
Confidence            999999965

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.68  E-value=9e-08  Score=98.41  Aligned_cols=88  Identities=25%  Similarity=0.302  Sum_probs=72.6

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      |...+.||+|+||.||++.... +..+|+|.+....   ....+.+..|..++..+ +|++++++.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            5566799999999999998754 7799999987432   22344677888888777 68999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 ~~~~g~L~~~~~~   94 (323)
T cd05616          82 YVNGGDLMYQIQQ   94 (323)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999988854

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.68  E-value=2.8e-08  Score=105.28  Aligned_cols=89  Identities=22%  Similarity=0.348  Sum_probs=77.0

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      -++..+.||.|+-|.|..|++. .|+.+|||.+.+..   ........+|+.+|+-|.|||+++|+.++....++|||.|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            3566679999999999999974 49999999997652   2223567899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|.|+++|..
T Consensus        93 yv~gGELFdylv~  105 (786)
T KOG0588|consen   93 YVPGGELFDYLVR  105 (786)
T ss_pred             ecCCchhHHHHHh
Confidence            9999999999863

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.68  E-value=5.1e-09  Score=106.82  Aligned_cols=89  Identities=30%  Similarity=0.465  Sum_probs=73.8

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHH--HHHHHHHHhcCC-CCceeceeEEEEECC-eEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEE--FKNEVTLIARLQ-HRNLVKLLGCCIQAD-ESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~--f~~E~~~l~~l~-H~nlv~l~g~~~~~~-~~~lV  547 (579)
                      ++|...++||.|.||.||+++- ..+..||||+++..-.. .++  =++|+..|+++. |||||+|.....+.+ .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            4566668999999999999995 45889999999854222 333  369999999998 999999999998887 99999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +|||+ -+|.+++.+.
T Consensus        89 fE~Md-~NLYqLmK~R  103 (538)
T KOG0661|consen   89 FEFMD-CNLYQLMKDR  103 (538)
T ss_pred             HHhhh-hhHHHHHhhc
Confidence            99996 5899999764

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.68  E-value=7.9e-08  Score=98.94  Aligned_cols=84  Identities=23%  Similarity=0.343  Sum_probs=68.8

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHH-HHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVT-LIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~-~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++... +++.+|+|++...   ......++..|.. ++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            36899999999999864 4889999998643   1223346666665 46778999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 ~~L~~~l~~   89 (325)
T cd05604          81 GELFFHLQR   89 (325)
T ss_pred             CCHHHHHHH
Confidence            999988864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.68  E-value=4.9e-08  Score=100.83  Aligned_cols=89  Identities=25%  Similarity=0.488  Sum_probs=74.6

Q ss_pred             cccccceecccCceeEEEEEecC--------CcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE--------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE  543 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~--------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~  543 (579)
                      .|...+.||+|+||.||++....        ...+|+|.++... ....+++.+|+.++.++ +|+||+++++++...+.
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   92 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence            45666899999999999997421        2368999887442 23456899999999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++++||+++|+|.++|..
T Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (334)
T cd05100          93 LYVLVEYASKGNLREYLRA  111 (334)
T ss_pred             eEEEEecCCCCcHHHHHHh
Confidence            9999999999999999965

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.67  E-value=4.4e-08  Score=99.23  Aligned_cols=84  Identities=27%  Similarity=0.417  Sum_probs=74.2

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHH
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      ..||+|+||.||++... .+..+|+|.+........+.+.+|+.++.+++|+|++++++.+..++..++|+||+++++|.
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            47999999999999864 47899999987554455667999999999999999999999999999999999999999999


Q ss_pred             HHhcC
Q 008046          558 FFIFD  562 (579)
Q Consensus       558 ~~l~~  562 (579)
                      +++..
T Consensus       108 ~~~~~  112 (292)
T cd06658         108 DIVTH  112 (292)
T ss_pred             HHHhc
Confidence            98853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.67  E-value=6.3e-08  Score=97.33  Aligned_cols=87  Identities=34%  Similarity=0.547  Sum_probs=71.6

Q ss_pred             cccceecccCceeEEEEEe-----cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEE
Q 008046          476 ASYNKLGEGGFGPVYKGTL-----VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLI  547 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV  547 (579)
                      ...+.||+|+||.||++.+     .++..||+|.++... ....+.|.+|++++++++|+|++++.+++...  ...++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            5557899999999987653     347789999987542 23456899999999999999999999988763  358899


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus        87 ~e~~~~~~l~~~~~~  101 (283)
T cd05080          87 MEYVPLGSLRDYLPK  101 (283)
T ss_pred             ecCCCCCCHHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.67  E-value=7.4e-08  Score=95.38  Aligned_cols=82  Identities=29%  Similarity=0.496  Sum_probs=68.8

Q ss_pred             eecccCceeEEEEEec---CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          480 KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      +||+|+||.||+|...   .+..+|+|.++...  ....++|.+|+.++.+++|+|++++++++. .+..++|+||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            6899999999999753   46789999986432  234568999999999999999999999875 55678999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|.+++..
T Consensus        81 ~L~~~l~~   88 (257)
T cd05116          81 PLNKFLQK   88 (257)
T ss_pred             cHHHHHHh
Confidence            99999854

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.67  E-value=7.6e-08  Score=96.00  Aligned_cols=86  Identities=30%  Similarity=0.600  Sum_probs=69.9

Q ss_pred             ccceecccCceeEEEEEecC-Cc--EEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------CeEE
Q 008046          477 SYNKLGEGGFGPVYKGTLVE-GQ--EIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------DESM  545 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~-g~--~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~~~~  545 (579)
                      ..++||+|+||.||+|.... +.  .+|+|.++..  .....+.|..|+.++..++|+|+++++++|...      ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            44689999999999999755 32  5899988643  233456899999999999999999999988642      2468


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        83 ~v~e~~~~~~l~~~~~~   99 (272)
T cd05075          83 VILPFMKHGDLHSFLLY   99 (272)
T ss_pred             EEEEeCCCCcHHHHHHH
Confidence            99999999999998853

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.67  E-value=1.8e-08  Score=99.99  Aligned_cols=84  Identities=30%  Similarity=0.511  Sum_probs=66.5

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----eEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----ESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----~~~lV  547 (579)
                      .+...+.+|+|+||.||+|.+.. ++.||||+.-....    .--+|+++|++++|||||+|+-++....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            34555799999999999999754 78999999864422    2247899999999999999998876532     34689


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||||. +|.+++..
T Consensus       101 leymP~-tL~~~~r~  114 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRH  114 (364)
T ss_pred             HHhchH-HHHHHHHH
Confidence            999985 89998874

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.66  E-value=8.2e-08  Score=98.77  Aligned_cols=88  Identities=25%  Similarity=0.322  Sum_probs=72.1

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEe
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      |...+.||+|+||.||++... +++.||+|.+...   .....+.+..|..++..+. |++++++.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            455579999999999999865 4889999998743   1233457888999988885 5778889888888889999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus        82 y~~~g~L~~~i~~   94 (323)
T cd05615          82 YVNGGDLMYHIQQ   94 (323)
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999998854

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.66  E-value=4.8e-08  Score=106.39  Aligned_cols=95  Identities=21%  Similarity=0.209  Sum_probs=76.7

Q ss_pred             HHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC---
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD---  542 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~---  542 (579)
                      ....++|...+.||+|+||.||++... +++.||||.+...  .......+.+|+.++..++|+|++++...+....   
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            344567888899999999999999854 5899999998643  2344567889999999999999999887665432   


Q ss_pred             -----eEEEEEeccCCCCHHHHhcCC
Q 008046          543 -----ESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       543 -----~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                           ..++|+||+++|+|.++|...
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~  133 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSR  133 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHh
Confidence                 367999999999999998653

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.66  E-value=1.3e-07  Score=96.72  Aligned_cols=89  Identities=25%  Similarity=0.331  Sum_probs=77.5

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +|...+.||+|+||.||++.... +..+|+|.+.....   ...+.+..|++++..++|+||+++++.+......++|+|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            56677899999999999999765 88999999975422   244678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus        82 ~~~~~~L~~~~~~   94 (316)
T cd05574          82 YCPGGELFRLLQR   94 (316)
T ss_pred             ecCCCCHHHHHHh
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.66  E-value=6.3e-08  Score=98.31  Aligned_cols=84  Identities=26%  Similarity=0.389  Sum_probs=73.9

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHH
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      ..||+|+||.||++... +++.+|+|.+........+.+.+|+.++..++|+|++++++.+..++..++|+||+++++|.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            47999999999999864 48899999997554445667899999999999999999999999999999999999999999


Q ss_pred             HHhcC
Q 008046          558 FFIFD  562 (579)
Q Consensus       558 ~~l~~  562 (579)
                      +++..
T Consensus       107 ~~~~~  111 (297)
T cd06659         107 DIVSQ  111 (297)
T ss_pred             HHHhh
Confidence            88754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.66  E-value=1.2e-07  Score=95.61  Aligned_cols=91  Identities=29%  Similarity=0.452  Sum_probs=75.9

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++++|...+.||+|+||.||++... +++.+|+|.+..... .....+.+|+.++..++|+|++++.+++..+...++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            3567888889999999999999864 488999999865432 23346789999999999999999999999888999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||++ ++|.+++..
T Consensus        83 e~~~-~~l~~~~~~   95 (291)
T cd07870          83 EYMH-TDLAQYMIQ   95 (291)
T ss_pred             eccc-CCHHHHHHh
Confidence            9995 788777754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.66  E-value=5.5e-08  Score=97.72  Aligned_cols=87  Identities=37%  Similarity=0.574  Sum_probs=73.7

Q ss_pred             ccccceecccCceeEEEEEecC------CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      |...++||+|+||.||+|....      +..||+|+++..... ..+.|..|+.++.+++|+||+++++++......+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            3444689999999999998632      467999999754332 245789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhc
Q 008046          548 YEYMPNKSLDFFIF  561 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~  561 (579)
                      +||+++++|.+++.
T Consensus        87 ~e~~~~~~l~~~l~  100 (283)
T cd05091          87 FSYCSHSDLHEFLV  100 (283)
T ss_pred             EEcCCCCcHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.66  E-value=1.5e-07  Score=93.69  Aligned_cols=89  Identities=29%  Similarity=0.510  Sum_probs=73.9

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESM  545 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~  545 (579)
                      +|...+.||+|+||.||++.... +..+|+|.+....     .+..+.+.+|+.++.+++|+||+++++++..  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            56777899999999999998754 8899999886331     1234568899999999999999999998765  35678


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +++||+++++|.+++..
T Consensus        83 l~~e~~~~~~L~~~l~~   99 (266)
T cd06651          83 IFMEYMPGGSVKDQLKA   99 (266)
T ss_pred             EEEeCCCCCcHHHHHHH
Confidence            99999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.66  E-value=7.6e-08  Score=95.53  Aligned_cols=90  Identities=21%  Similarity=0.304  Sum_probs=77.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +|...+.||+|+||.||++... +++.+|+|.+.... ....+++.+|+.++++++|+|++++.+.+......++|+||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            3455578999999999999976 48899999987553 344568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (265)
T cd06605          82 DGGSLDKILKEV   93 (265)
T ss_pred             CCCcHHHHHHHc
Confidence            999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.65  E-value=9.9e-08  Score=96.64  Aligned_cols=84  Identities=29%  Similarity=0.427  Sum_probs=74.1

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHH
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      .+||+|+||.||++... ++..+|+|++..........+.+|+.+++.++|+|++++++.+...+..++|+||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            47999999999999874 58899999986544445567999999999999999999999999999999999999999999


Q ss_pred             HHhcC
Q 008046          558 FFIFD  562 (579)
Q Consensus       558 ~~l~~  562 (579)
                      +++..
T Consensus       106 ~~~~~  110 (292)
T cd06657         106 DIVTH  110 (292)
T ss_pred             HHHhc
Confidence            98754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.65  E-value=9.7e-08  Score=97.89  Aligned_cols=84  Identities=27%  Similarity=0.367  Sum_probs=70.4

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... +..||+|.++...   ....+.+..|..++... +|+|++++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            379999999999999754 7899999997431   23345677888888754 899999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 g~L~~~i~~   89 (316)
T cd05620          81 GDLMFHIQD   89 (316)
T ss_pred             CcHHHHHHH
Confidence            999988864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.65  E-value=1.1e-07  Score=107.42  Aligned_cols=90  Identities=21%  Similarity=0.306  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++... .++.||+|+++...   ....+.+..|+.++..++|+||+++++.+......+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            46777789999999999999976 48899999987432   223467889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.++|..
T Consensus        84 Ey~~g~~L~~li~~   97 (669)
T cd05610          84 EYLIGGDVKSLLHI   97 (669)
T ss_pred             eCCCCCCHHHHHHh
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.65  E-value=9.1e-08  Score=94.70  Aligned_cols=84  Identities=35%  Similarity=0.578  Sum_probs=70.1

Q ss_pred             ceecccCceeEEEEEecC----CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ++||+|+||.||+|....    +..+|+|.+..... ...+++.+|+.++.++.|+|++++++++. .+..++|+||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            479999999999998533    26899999875533 24568999999999999999999999875 5568999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |+|.++|...
T Consensus        80 ~~L~~~l~~~   89 (257)
T cd05060          80 GPLLKYLKKR   89 (257)
T ss_pred             CcHHHHHHhC
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.65  E-value=1.1e-07  Score=97.61  Aligned_cols=87  Identities=25%  Similarity=0.504  Sum_probs=72.8

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++... ++..+|+|.+....   ......+.+|++++++++|+|++++++++......++|+||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            556678999999999999964 47899999986432   22345789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ |+|.+++..
T Consensus       107 ~~-g~l~~~~~~  117 (317)
T cd06635         107 CL-GSASDLLEV  117 (317)
T ss_pred             CC-CCHHHHHHH
Confidence            96 688877753

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.65  E-value=1.2e-07  Score=93.40  Aligned_cols=89  Identities=22%  Similarity=0.377  Sum_probs=77.2

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++... ++..+++|++.....  ...+++..|++++++++|+|++++.+........++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            555678999999999999975 478999999975432  45568999999999999999999999998889999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~l~~~   93 (258)
T cd08215          82 DGGDLSQKIKKQ   93 (258)
T ss_pred             CCCcHHHHHHHh
Confidence            999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.65  E-value=8.6e-08  Score=100.66  Aligned_cols=87  Identities=21%  Similarity=0.331  Sum_probs=72.4

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----eEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----ESML  546 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----~~~l  546 (579)
                      |...++||+|+||.||++... +++.||+|++...  .....+.+.+|+.++..++|+||+++++++...+     ..++
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            566789999999999999864 5889999998643  2233467899999999999999999999988766     7899


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+. ++|.+++..
T Consensus        82 v~e~~~-~~l~~~~~~   96 (372)
T cd07853          82 VTELMQ-SDLHKIIVS   96 (372)
T ss_pred             Eeeccc-cCHHHHHhc
Confidence            999996 688887754

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.64  E-value=1.6e-07  Score=91.94  Aligned_cols=89  Identities=31%  Similarity=0.568  Sum_probs=78.2

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      |...+.||+|++|.||++... ++..+++|++........+.+.+|+.++++++|+|++++.+.+......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            445578999999999999976 5788999999765444567899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      ++|.+++...
T Consensus        82 ~~L~~~~~~~   91 (253)
T cd05122          82 GSLKDLLKST   91 (253)
T ss_pred             CcHHHHHhhc
Confidence            9999998654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.64  E-value=1.3e-07  Score=97.51  Aligned_cols=88  Identities=23%  Similarity=0.339  Sum_probs=73.5

Q ss_pred             ccccceecccCceeEEEEEe----cCCcEEEEEEecCC----CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEE
Q 008046          475 FASYNKLGEGGFGPVYKGTL----VEGQEIAVKRLSKG----SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~----~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~  545 (579)
                      |...+.||+|+||.||++..    ..++.+|+|.+...    .....+.+..|+.++..+ +|+||+++.+++...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            55668999999999999875    24788999998642    122345688999999999 5999999999998889999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        82 lv~e~~~~g~L~~~l~~   98 (332)
T cd05614          82 LILDYVSGGEMFTHLYQ   98 (332)
T ss_pred             EEEeCCCCCcHHHHHHH
Confidence            99999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.64  E-value=7.9e-08  Score=98.22  Aligned_cols=86  Identities=24%  Similarity=0.442  Sum_probs=69.8

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--------------ccHHHHHHHHHHHhcCCCCceeceeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--------------QGMEEFKNEVTLIARLQHRNLVKLLG  536 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--------------~~~~~f~~E~~~l~~l~H~nlv~l~g  536 (579)
                      .+.|...++||+|.||.|-++... +++.+|||.+.+...              ...+...+|+.+|++++|+|||+|+.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            356777789999999999999854 588999999964310              11357889999999999999999999


Q ss_pred             EEEE--CCeEEEEEeccCCCCHH
Q 008046          537 CCIQ--ADESMLIYEYMPNKSLD  557 (579)
Q Consensus       537 ~~~~--~~~~~lV~Ey~~~GsL~  557 (579)
                      +...  .+..|||+|||..|.+.
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~  198 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVK  198 (576)
T ss_pred             eecCcccCceEEEEEeccCCccc
Confidence            8765  35799999999988754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.64  E-value=1.1e-07  Score=95.42  Aligned_cols=98  Identities=28%  Similarity=0.490  Sum_probs=80.2

Q ss_pred             CHHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEE-
Q 008046          464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ-  540 (579)
Q Consensus       464 ~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~-  540 (579)
                      ++.++..+.+.|...+.||+|+||.||++... .++.+|+|.+... .....++..|+.++.++ +|+|++++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            45555566777888889999999999999974 4788999988643 23345788999999998 79999999999853 


Q ss_pred             -----CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 -----ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 -----~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                           ....+++|||+++|+|.+++..
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~  112 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKN  112 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHH
Confidence                 4578999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.64  E-value=9.4e-08  Score=96.02  Aligned_cols=89  Identities=29%  Similarity=0.506  Sum_probs=74.8

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +|...+.||+|+||.||++... ++..+|+|.+....  ....+.+.+|++++.+++|+|++++++++...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            3566789999999999999875 48899999986432  22345789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      ++ ++|.+++...
T Consensus        81 ~~-~~l~~~~~~~   92 (284)
T cd07860          81 LH-QDLKKFMDAS   92 (284)
T ss_pred             cc-cCHHHHHHhC
Confidence            95 6899888653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.63  E-value=1.3e-07  Score=97.72  Aligned_cols=87  Identities=18%  Similarity=0.384  Sum_probs=70.7

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----eEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----ESML  546 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----~~~l  546 (579)
                      |...++||+|+||.||++... ++..||+|+++..  .......+.+|+.++++++||||+++.+++....     ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            455679999999999999965 4889999998743  2233457899999999999999999999886432     4799


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+. ++|.+++..
T Consensus        82 v~e~~~-~~L~~~l~~   96 (338)
T cd07859          82 VFELME-SDLHQVIKA   96 (338)
T ss_pred             EEecCC-CCHHHHHHh
Confidence            999995 789988854

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.63  E-value=8.4e-08  Score=94.78  Aligned_cols=86  Identities=35%  Similarity=0.563  Sum_probs=73.5

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCCcccH--HHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGM--EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~--~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ...+.||+|+||.||++.... ++.+|+|.+........  .....|+.++.+++|+||++++++.......++|+||++
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~   81 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP   81 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence            345799999999999999766 66899999986543322  244569999999999999999999999999999999999


Q ss_pred             CCCHHHHhc
Q 008046          553 NKSLDFFIF  561 (579)
Q Consensus       553 ~GsL~~~l~  561 (579)
                      +++|.++|.
T Consensus        82 ~~~L~~~l~   90 (260)
T PF00069_consen   82 GGSLQDYLQ   90 (260)
T ss_dssp             TEBHHHHHH
T ss_pred             ccccccccc
Confidence            999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.63  E-value=1.4e-07  Score=94.48  Aligned_cols=84  Identities=27%  Similarity=0.464  Sum_probs=71.2

Q ss_pred             ecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++... +++.+|+|.+....   ....+.+..|+.++.+++|||++++++.+...+..++|+||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999854 48899999986431   22345678999999999999999999999888999999999999999


Q ss_pred             HHHhcCCC
Q 008046          557 DFFIFDID  564 (579)
Q Consensus       557 ~~~l~~~~  564 (579)
                      .+++....
T Consensus        81 ~~~l~~~~   88 (277)
T cd05577          81 KYHIYNVG   88 (277)
T ss_pred             HHHHHHcC
Confidence            99997543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=1.3e-08  Score=102.96  Aligned_cols=88  Identities=19%  Similarity=0.408  Sum_probs=77.3

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |...+.||+|.||.||||.... ++.||+|.+... .....++..+|+.++.+++|+|+.+.+|.+..+..++++||||.
T Consensus        15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~   94 (467)
T KOG0201|consen   15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG   94 (467)
T ss_pred             cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence            4555799999999999999644 789999999854 34456789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|++.+.|.-
T Consensus        95 gGsv~~lL~~  104 (467)
T KOG0201|consen   95 GGSVLDLLKS  104 (467)
T ss_pred             Ccchhhhhcc
Confidence            9999999864

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.63  E-value=1.5e-07  Score=93.46  Aligned_cols=83  Identities=24%  Similarity=0.273  Sum_probs=72.3

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++++++|+|++++++.+..+...++|+||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6899999999999764 8899999987432   23346799999999999999999999999999999999999999999


Q ss_pred             HHHhcCC
Q 008046          557 DFFIFDI  563 (579)
Q Consensus       557 ~~~l~~~  563 (579)
                      .+++...
T Consensus        81 ~~~l~~~   87 (262)
T cd05572          81 WTILRDR   87 (262)
T ss_pred             HHHHhhc
Confidence            9999653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.63  E-value=1.2e-07  Score=93.88  Aligned_cols=87  Identities=29%  Similarity=0.516  Sum_probs=73.2

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEEEEEeccC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESMLIYEYMP  552 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~lV~Ey~~  552 (579)
                      +|...+.||+|+||.||++... +..+|+|.++..  ...+.|.+|+.++++++|+|++++++++.. .+..++|+||++
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            4566689999999999999764 778999998643  235689999999999999999999998654 457899999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +|+|.+++...
T Consensus        84 ~~~L~~~~~~~   94 (256)
T cd05082          84 KGSLVDYLRSR   94 (256)
T ss_pred             CCcHHHHHHhc
Confidence            99999998653

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.62  E-value=1.8e-07  Score=94.29  Aligned_cols=88  Identities=27%  Similarity=0.432  Sum_probs=76.0

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +...+.||+|++|.||++... +++.+++|++........+.+.+|+.+++.++|+|++++++++...++.++|+||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            333469999999999999864 5789999998755444556789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      ++|.+++..
T Consensus       101 ~~L~~~~~~  109 (285)
T cd06648         101 GALTDIVTH  109 (285)
T ss_pred             CCHHHHHHh
Confidence            999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.62  E-value=1.3e-07  Score=93.73  Aligned_cols=84  Identities=32%  Similarity=0.592  Sum_probs=69.3

Q ss_pred             ceecccCceeEEEEEecC----CcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEEEEEeccC
Q 008046          479 NKLGEGGFGPVYKGTLVE----GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESMLIYEYMP  552 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~lV~Ey~~  552 (579)
                      +.||+|+||.||+|...+    ...+|+|.+... .....+.+..|+.+++.++|+|++++++++.. ....++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            368999999999998642    357999998643 23445689999999999999999999998864 445789999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        81 ~~~L~~~~~~   90 (262)
T cd05058          81 HGDLRNFIRS   90 (262)
T ss_pred             CCCHHHHHHh
Confidence            9999999964

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.62  E-value=8.2e-08  Score=96.45  Aligned_cols=88  Identities=30%  Similarity=0.494  Sum_probs=70.0

Q ss_pred             cccccceecccCceeEEEEEecC-Cc----EEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .|...+.||+|+||.||++.... ++    .+++|.+..... ....++..|+.++.++.|+||+++++++. ....+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence            45556799999999999998643 43    478888764322 23467888998999999999999999875 4557789


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus        87 ~e~~~~gsL~~~l~~  101 (279)
T cd05111          87 TQLSPLGSLLDHVRQ  101 (279)
T ss_pred             EEeCCCCcHHHHHHh
Confidence            999999999999965

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.62  E-value=5e-08  Score=96.16  Aligned_cols=88  Identities=28%  Similarity=0.483  Sum_probs=75.6

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...++||+|+||.||++... ++..+++|.+...  ......++..|+.++++++|+|++++.+.+......++|+||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            556679999999999999854 4788999998743  2334567889999999999999999999998889999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++.+
T Consensus        82 ~~~~L~~~~~~   92 (256)
T cd08530          82 PFGDLSKAISK   92 (256)
T ss_pred             CCCCHHHHHHH
Confidence            99999999865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.61  E-value=1.5e-07  Score=96.04  Aligned_cols=88  Identities=25%  Similarity=0.490  Sum_probs=73.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...++||+|+||.||++... +++.||+|.+....   .+..+++.+|+.++..++|+|++++.+++...+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            34666789999999999999875 48899999986432   233457899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhc
Q 008046          549 EYMPNKSLDFFIF  561 (579)
Q Consensus       549 Ey~~~GsL~~~l~  561 (579)
                      ||++ |+|.+++.
T Consensus        95 e~~~-g~l~~~~~  106 (307)
T cd06607          95 EYCL-GSASDILE  106 (307)
T ss_pred             HhhC-CCHHHHHH
Confidence            9996 67777764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.61  E-value=8e-08  Score=99.48  Aligned_cols=90  Identities=28%  Similarity=0.511  Sum_probs=73.2

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC-Ce
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA-DE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~-~~  543 (579)
                      ++|...+.||+|+||.||++...      .++.||+|+++... ....+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            45667789999999999999642      24689999987432 23345788999999999 899999999988654 56


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++++||+++|+|.++|..
T Consensus        87 ~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             EEEEEecCCCCCHHHHHHh
Confidence            8899999999999999964

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.61  E-value=6.3e-08  Score=107.76  Aligned_cols=94  Identities=31%  Similarity=0.472  Sum_probs=78.4

Q ss_pred             hcccccccceecccCceeEEEEEecC--------CcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE--------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ  540 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~--------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~  540 (579)
                      ..+++...+.||+|.||.|++|.+..        ...||||.++... ....+.+..|+.+|..+ +|+|++.++|+|..
T Consensus       294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~  373 (609)
T KOG0200|consen  294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ  373 (609)
T ss_pred             chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence            33444445699999999999998531        3469999998653 34567899999999998 69999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHhcCCC
Q 008046          541 ADESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       541 ~~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +.+.++|.||+++|+|.+||+..+
T Consensus       374 ~~~~~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  374 DGPLYVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             CCceEEEEEeccCCcHHHHHHhcc
Confidence            999999999999999999998655

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.61  E-value=1.4e-07  Score=94.86  Aligned_cols=88  Identities=23%  Similarity=0.420  Sum_probs=74.4

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +|...++||+|+||.||++.... ++.||+|.++..  .....+.+.+|++++++++|+|++++++++..++..++|+||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            46667899999999999999764 789999998743  223356899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhc
Q 008046          551 MPNKSLDFFIF  561 (579)
Q Consensus       551 ~~~GsL~~~l~  561 (579)
                      ++++.|..++.
T Consensus        82 ~~~~~l~~~~~   92 (288)
T cd07833          82 VERTLLELLEA   92 (288)
T ss_pred             CCCCHHHHHHh
Confidence            99877766554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.60  E-value=1.4e-07  Score=95.45  Aligned_cols=89  Identities=25%  Similarity=0.393  Sum_probs=72.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCe-----E
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE-----S  544 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~-----~  544 (579)
                      +|...+.||+|+||.||++... +++.||+|.++...  ......+.+|+.++.++ +|+|++++++++...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            5677789999999999999975 48899999886432  22345788999999999 56999999999877665     8


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++ +|.+++...
T Consensus        82 ~lv~e~~~~-~l~~~~~~~   99 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSN   99 (295)
T ss_pred             EEEeeccCc-CHHHHHHHh
Confidence            999999985 898888643

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.60  E-value=2.8e-07  Score=90.62  Aligned_cols=88  Identities=32%  Similarity=0.528  Sum_probs=76.5

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|++|.||++... .++.+++|.+.....  ...+.+.+|++++.+++|+|++++.+++...+..++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            455679999999999999865 478899999975533  34568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~~~~   92 (254)
T cd06627          82 ENGSLRQIIKK   92 (254)
T ss_pred             CCCcHHHHHHh
Confidence            99999999854

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.60  E-value=1.9e-07  Score=96.13  Aligned_cols=84  Identities=24%  Similarity=0.318  Sum_probs=68.0

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHH-HHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVT-LIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++.... ++.+|+|.+....   ......+..|.. ++..++|+||+++++.+...+..++|+||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            379999999999999754 6789999986431   122345555554 46778999999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.+++..
T Consensus        81 ~~L~~~~~~   89 (325)
T cd05602          81 GELFYHLQR   89 (325)
T ss_pred             CcHHHHHHh
Confidence            999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=8e-08  Score=102.40  Aligned_cols=90  Identities=28%  Similarity=0.444  Sum_probs=77.0

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~  545 (579)
                      ..++|...++||+|.||+|+.+.++. ++..|||.+++.   ...+.+..+.|.+|+.-+ +||-|++|+.++...++++
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            44678888999999999999999865 778999999876   335577889999988877 5999999999999999999


Q ss_pred             EEEeccCCCCHHHHh
Q 008046          546 LIYEYMPNKSLDFFI  560 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l  560 (579)
                      .||||+.+|++..++
T Consensus       446 fvmey~~Ggdm~~~~  460 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHI  460 (694)
T ss_pred             EEEEecCCCcEEEEE
Confidence            999999999954333

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.58  E-value=1.4e-07  Score=94.51  Aligned_cols=90  Identities=27%  Similarity=0.518  Sum_probs=73.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCc----EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQ----EIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      +.|...++||+|+||.||+|... +++    .||+|.++... ....+++.+|+.++..++|+|++++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            45666689999999999999853 344    48999987542 3345689999999999999999999999875 45678


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      ++||+++|+|.+++...
T Consensus        86 ~~~~~~~g~l~~~l~~~  102 (279)
T cd05109          86 VTQLMPYGCLLDYVREN  102 (279)
T ss_pred             EEEcCCCCCHHHHHhhc
Confidence            99999999999999753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.58  E-value=1.7e-07  Score=95.03  Aligned_cols=91  Identities=26%  Similarity=0.441  Sum_probs=74.1

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----  542 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----  542 (579)
                      ..++|...+.||+|+||.||+|.... ++.||+|.++...  ......+.+|+.++++++|||++++++++....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            45677778899999999999999754 7899999997432  223457789999999999999999999887654     


Q ss_pred             -----eEEEEEeccCCCCHHHHhcC
Q 008046          543 -----ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 -----~~~lV~Ey~~~GsL~~~l~~  562 (579)
                           ..++|+||+++ +|..++..
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~  108 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLES  108 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhc
Confidence                 78999999975 77777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.58  E-value=6.2e-08  Score=100.17  Aligned_cols=92  Identities=18%  Similarity=0.316  Sum_probs=76.1

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe-EEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE-SMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~-~~lV~  548 (579)
                      ++|...+++|+|+||.++...++. +..+++|.+...  .....+.-.+|+.++++++|||||.....+.+.+. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            345556799999999999887654 678999998744  22334578899999999999999999999988887 99999


Q ss_pred             eccCCCCHHHHhcCCC
Q 008046          549 EYMPNKSLDFFIFDID  564 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~  564 (579)
                      ||+++|+|.+.|...+
T Consensus        84 ~Y~eGg~l~~~i~~~k   99 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK   99 (426)
T ss_pred             eecCCCCHHHHHHHHh
Confidence            9999999999997544

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.58  E-value=1.7e-07  Score=94.18  Aligned_cols=87  Identities=25%  Similarity=0.452  Sum_probs=73.6

Q ss_pred             cccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          476 ASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ...++||+|++|.||++... ++..+|+|++....  ....+.+.+|++++.+++|+|++++++++...+..++++||++
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence            44578999999999999865 58899999987432  2234678899999999999999999999999999999999995


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                       ++|.+++...
T Consensus        82 -~~l~~~~~~~   91 (283)
T cd07835          82 -LDLKKYMDSS   91 (283)
T ss_pred             -cCHHHHHhhC
Confidence             7899988653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.57  E-value=3.2e-07  Score=91.21  Aligned_cols=90  Identities=28%  Similarity=0.477  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-----SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~  544 (579)
                      .+|...+.||+|+||.||++... ++..+|+|.+...     ..+..+.+.+|+.++.+++|+|++++++++...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            35677789999999999999864 4889999987532     123345789999999999999999999988654  457


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++++||+++++|.+++..
T Consensus        82 ~~v~e~~~~~~L~~~~~~   99 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA   99 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH
Confidence            899999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.57  E-value=1.9e-07  Score=96.63  Aligned_cols=84  Identities=17%  Similarity=0.179  Sum_probs=65.8

Q ss_pred             hcccccccceecccCceeEEEEEec--CCcEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV--EGQEIAVKRLSKGS-----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~--~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      ..++|...+.||+|+||.||++...  .++.+|||++....     ....+.|.+|+++|.+++|+|++..+..   ...
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~   92 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK   92 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence            3466888899999999999999865  46778999875321     1234579999999999999999853322   245


Q ss_pred             EEEEEeccCCCCHH
Q 008046          544 SMLIYEYMPNKSLD  557 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~  557 (579)
                      .+|||||+++++|.
T Consensus        93 ~~LVmE~~~G~~L~  106 (365)
T PRK09188         93 DGLVRGWTEGVPLH  106 (365)
T ss_pred             cEEEEEccCCCCHH
Confidence            79999999999996

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.57  E-value=2.7e-07  Score=93.24  Aligned_cols=89  Identities=26%  Similarity=0.436  Sum_probs=74.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...++||+|++|.||++... +++.+|+|.+....  ....+.+.+|+.++++++|+|++++++++......++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            35667789999999999999975 58899999986432  2234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |++ ++|.+++..
T Consensus        82 ~~~-~~l~~~~~~   93 (294)
T PLN00009         82 YLD-LDLKKHMDS   93 (294)
T ss_pred             ccc-ccHHHHHHh
Confidence            996 588877743

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.57  E-value=5.3e-08  Score=96.50  Aligned_cols=99  Identities=24%  Similarity=0.380  Sum_probs=74.0

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG-----SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      |...++||+|+||.||++.... +..+++|.++..     .......+..|+.++++++|||++++++++...+..++|+
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            4455789999999999998643 444555555422     1223446778999999999999999999998888999999


Q ss_pred             eccCCCCHHHHhcCCCCCCcccCcc
Q 008046          549 EYMPNKSLDFFIFDIDWNGLMLTRS  573 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~~~~~~l~~~  573 (579)
                      ||+++++|.+++.........+++.
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~  106 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSEN  106 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHH
Confidence            9999999999886533333334443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.57  E-value=1.1e-07  Score=94.20  Aligned_cols=82  Identities=21%  Similarity=0.363  Sum_probs=72.1

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++.... ++.+++|.+.....   ...+.+.+|+.++.+++|+|++++.+.+......++|+||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999865 88999999875422   3456889999999999999999999999889999999999999999


Q ss_pred             HHHhcC
Q 008046          557 DFFIFD  562 (579)
Q Consensus       557 ~~~l~~  562 (579)
                      .+++..
T Consensus        81 ~~~l~~   86 (265)
T cd05579          81 ASLLEN   86 (265)
T ss_pred             HHHHHH
Confidence            999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.56  E-value=9e-08  Score=95.68  Aligned_cols=90  Identities=27%  Similarity=0.379  Sum_probs=76.9

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +|...+.||+|+||.||++... ++..+|+|.+...   .....+.+..|+.++.+++ |+|++++++.+...+..++|+
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            4666679999999999999975 5889999998642   2233467889999999998 999999999998889999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++++|.+++...
T Consensus        82 e~~~~~~L~~~l~~~   96 (280)
T cd05581          82 EYAPNGELLQYIRKY   96 (280)
T ss_pred             cCCCCCcHHHHHHHc
Confidence            999999999999653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.56  E-value=2e-07  Score=100.33  Aligned_cols=84  Identities=21%  Similarity=0.236  Sum_probs=72.1

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ..+|...+.||+|+||.||++.... ++.||||...      ...+.+|++++++++|+|||++++++...+..++|+|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4568888899999999999999765 7889999643      23467899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      + .++|.+++..
T Consensus       242 ~-~~~L~~~l~~  252 (461)
T PHA03211        242 Y-RSDLYTYLGA  252 (461)
T ss_pred             c-CCCHHHHHHh
Confidence            9 4799888854

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.55  E-value=2.8e-07  Score=93.01  Aligned_cols=88  Identities=24%  Similarity=0.312  Sum_probs=73.8

Q ss_pred             ccccceecccCceeEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEE
Q 008046          475 FASYNKLGEGGFGPVYKGTL----VEGQEIAVKRLSKGS----GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~  545 (579)
                      |...+.||+|+||.||++..    .+|..+|+|++....    ....+.+.+|+.++.++ +|+||+++.+++..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            45567899999999999885    357899999987432    12346788999999999 6999999999988888999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++++|.+++..
T Consensus        82 lv~e~~~~~~L~~~l~~   98 (290)
T cd05613          82 LILDYINGGELFTHLSQ   98 (290)
T ss_pred             EEEecCCCCcHHHHHHH
Confidence            99999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.55  E-value=5e-08  Score=94.92  Aligned_cols=84  Identities=26%  Similarity=0.368  Sum_probs=74.5

Q ss_pred             ceecccCceeEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          479 NKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      +.||+|+|+.|--.+ +..|.++|||.+.+..........+|++++... .|+||+.|+.++.+....|||+|-|.+|+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            589999999998776 567899999999876555567889999999988 599999999999999999999999999999


Q ss_pred             HHHhcC
Q 008046          557 DFFIFD  562 (579)
Q Consensus       557 ~~~l~~  562 (579)
                      .++|..
T Consensus       164 LshI~~  169 (463)
T KOG0607|consen  164 LSHIQK  169 (463)
T ss_pred             HHHHHH
Confidence            998864

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.55  E-value=2.5e-07  Score=91.32  Aligned_cols=88  Identities=17%  Similarity=0.266  Sum_probs=72.8

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~lV~Ey  550 (579)
                      |...+.||+|++|.||++.... ++.+|+|++...  .....+.+.+|+.++++++|+|++++.+.+.. ....++|+||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            5566799999999999998654 678999998643  22345678999999999999999999987654 4467899999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|.+++..
T Consensus        82 ~~~~~l~~~l~~   93 (257)
T cd08223          82 CEGGDLYHKLKE   93 (257)
T ss_pred             cCCCcHHHHHHH
Confidence            999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.55  E-value=3e-07  Score=97.19  Aligned_cols=83  Identities=13%  Similarity=0.190  Sum_probs=71.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .+|...++||+|+||.||++... .++.||+|...      .+.+.+|+.++++++|||||++++++......++|+|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            45777889999999999999864 47899999753      235789999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      . ++|..++..
T Consensus       166 ~-~~L~~~l~~  175 (391)
T PHA03212        166 K-TDLYCYLAA  175 (391)
T ss_pred             C-CCHHHHHHh
Confidence            5 789888854

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.55  E-value=2.3e-07  Score=93.82  Aligned_cols=89  Identities=24%  Similarity=0.435  Sum_probs=73.4

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV  547 (579)
                      ++|...+.||+|+||.||++.... ++.+++|.++...  ......+.+|+.++.+++|+|++++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            356666799999999999999764 7889999997432  22234678899999999999999999998877  889999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||++ ++|.+++..
T Consensus        85 ~e~~~-~~L~~~~~~   98 (293)
T cd07843          85 MEYVE-HDLKSLMET   98 (293)
T ss_pred             ehhcC-cCHHHHHHh
Confidence            99997 599888864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.54  E-value=2.4e-07  Score=91.46  Aligned_cols=86  Identities=30%  Similarity=0.545  Sum_probs=72.4

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +|...+.||+|+||.||++.. .++.+|+|.++..  ...+.+.+|+.++.+++|+|++++.+++.. +..++|+||+++
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~   82 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSK   82 (254)
T ss_pred             HceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCC
Confidence            456668999999999999875 5778999998643  234689999999999999999999998865 457899999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |+|.+++...
T Consensus        83 ~~L~~~l~~~   92 (254)
T cd05083          83 GNLVNFLRTR   92 (254)
T ss_pred             CCHHHHHHhc
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.54  E-value=2.8e-07  Score=95.01  Aligned_cols=94  Identities=21%  Similarity=0.387  Sum_probs=76.8

Q ss_pred             HHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCe
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADE  543 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~  543 (579)
                      +...+++|...+.||+|+||.||++... ++..+|+|++...  .....+.+..|+.++.+++|||++++.+++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            3446778888899999999999999855 5889999988642  22335678899999999999999999998865 567


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+ +++|..++..
T Consensus        85 ~~lv~e~~-~~~L~~~~~~  102 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTS  102 (328)
T ss_pred             EEEEeehh-ccCHHHHHhc
Confidence            89999998 5689888754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.53  E-value=2.8e-07  Score=91.90  Aligned_cols=87  Identities=31%  Similarity=0.510  Sum_probs=70.3

Q ss_pred             cccceecccCceeEEEEEec----CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------e
Q 008046          476 ASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------E  543 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------~  543 (579)
                      ...+.||+|+||.||++...    .+..+|+|.+...  .....+++.+|+.++++++|||++++++++....      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            34568999999999999864    2578999998754  2334567999999999999999999999886532      2


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++++||+++|+|.+++..
T Consensus        82 ~~~~~~~~~~~~l~~~~~~  100 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLM  100 (273)
T ss_pred             eEEEEecCCCCcHHHHHHH
Confidence            4788999999999988854

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.53  E-value=2e-07  Score=101.81  Aligned_cols=110  Identities=26%  Similarity=0.441  Sum_probs=85.8

Q ss_pred             CHHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEE-
Q 008046          464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ-  540 (579)
Q Consensus       464 ~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~-  540 (579)
                      .++.+...++.|...+.||.|.+|.||+++.. +++.+|+|.+... ....++...|..++... +|||++.++|+... 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            34555667788888899999999999999965 4888999988754 34456777888888776 79999999999865 


Q ss_pred             ----CCeEEEEEeccCCCCHHHHhcCCCCCCcccCccccc
Q 008046          541 ----ADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       541 ----~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                          ++.++||||||.+||.-+++....  ..-+.|..+.
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~Ia  126 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIA  126 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHH
Confidence                568999999999999999987543  3334454443

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.53  E-value=4.2e-07  Score=92.98  Aligned_cols=87  Identities=26%  Similarity=0.499  Sum_probs=72.1

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...++||+|+||.||++... .+..+++|.+....   ....+.+.+|+.++.+++|+|++++.+++...+..++|+||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            444568999999999999864 47889999986432   22345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +. |+|.+++..
T Consensus       103 ~~-~~l~~~l~~  113 (313)
T cd06633         103 CL-GSASDLLEV  113 (313)
T ss_pred             CC-CCHHHHHHh
Confidence            95 688777754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.52  E-value=4.4e-07  Score=91.02  Aligned_cols=87  Identities=24%  Similarity=0.409  Sum_probs=73.3

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEEEec
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLIYEY  550 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV~Ey  550 (579)
                      ...++||+|+||.||++...+ +..+|+|.+....  ....+.+.+|+.++.+++|+|++++++++...  ...++|+||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            345689999999999999764 7899999997552  23346789999999999999999999999887  789999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      ++ ++|.+++...
T Consensus        82 ~~-~~l~~~~~~~   93 (287)
T cd07840          82 MD-HDLTGLLDSP   93 (287)
T ss_pred             cc-ccHHHHHhcc
Confidence            97 4898888653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.52  E-value=9e-08  Score=101.58  Aligned_cols=83  Identities=25%  Similarity=0.484  Sum_probs=74.9

Q ss_pred             eecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHHH
Q 008046          480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDF  558 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~  558 (579)
                      +||+|.||+||.|+..+ ...+|||.+.....+..+-+..|+.+-+.++|+|||+.+|.|.++....|.||-+|+|||.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            79999999999999654 55799999987766677788899999999999999999999999999999999999999999


Q ss_pred             HhcC
Q 008046          559 FIFD  562 (579)
Q Consensus       559 ~l~~  562 (579)
                      +|..
T Consensus       662 LLrs  665 (1226)
T KOG4279|consen  662 LLRS  665 (1226)
T ss_pred             HHHh
Confidence            9963

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.51  E-value=1.1e-07  Score=97.77  Aligned_cols=90  Identities=26%  Similarity=0.298  Sum_probs=76.0

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|.|..|-.+++- .|..||||++.+..-  .....+.+|++.|+-++|||||+|+.+...+..+|||+|.-
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG   99 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG   99 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence            344468999999999888753 589999999986532  23457889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCC
Q 008046          552 PNKSLDFFIFDID  564 (579)
Q Consensus       552 ~~GsL~~~l~~~~  564 (579)
                      .+|+|.+||...+
T Consensus       100 D~GDl~DyImKHe  112 (864)
T KOG4717|consen  100 DGGDLFDYIMKHE  112 (864)
T ss_pred             CCchHHHHHHhhh
Confidence            9999999996544

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.50  E-value=4.7e-08  Score=101.98  Aligned_cols=87  Identities=26%  Similarity=0.497  Sum_probs=72.8

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ---GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      -|.+.+.||.|+||.||-+... +...||||++.-...+   ...+.+.|+..+.+++|||.+...||+......+||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            3666679999999999999854 4778999999754333   34578999999999999999999999999889999999


Q ss_pred             ccCCCCHHHHhc
Q 008046          550 YMPNKSLDFFIF  561 (579)
Q Consensus       550 y~~~GsL~~~l~  561 (579)
                      || -||-.++|-
T Consensus       107 YC-lGSAsDlle  117 (948)
T KOG0577|consen  107 YC-LGSASDLLE  117 (948)
T ss_pred             HH-hccHHHHHH
Confidence            99 577777763

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.50  E-value=4.1e-07  Score=92.83  Aligned_cols=87  Identities=24%  Similarity=0.413  Sum_probs=71.8

Q ss_pred             ccccceecccCceeEEEEEecC---CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE---GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESML  546 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~l  546 (579)
                      |...++||+|+||.||++....   +..+|+|.+....   ....+.+.+|+.++.+++|||++++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            4556789999999999999754   7899999997632   23346788999999999999999999999887  78999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++ +|.+++..
T Consensus        82 v~e~~~~-~l~~~~~~   96 (316)
T cd07842          82 LFDYAEH-DLWQIIKF   96 (316)
T ss_pred             EEeCCCc-CHHHHHHh
Confidence            9999974 77777643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.50  E-value=2.9e-07  Score=91.41  Aligned_cols=90  Identities=26%  Similarity=0.480  Sum_probs=73.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCc-eeceeEEEEECC------e
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRN-LVKLLGCCIQAD------E  543 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~n-lv~l~g~~~~~~------~  543 (579)
                      .|...++||+|.||.||+|+.. .|+.||+|++.....  .....-.+|+.++.+++|+| +|+|.+++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            3444468999999999999964 488999999975432  12345689999999999999 999999998877      7


Q ss_pred             EEEEEeccCCCCHHHHhcCCC
Q 008046          544 SMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      .++|+||+. -+|..++....
T Consensus        92 l~lvfe~~d-~DL~~ymd~~~  111 (323)
T KOG0594|consen   92 LYLVFEFLD-RDLKKYMDSLP  111 (323)
T ss_pred             EEEEEEeec-ccHHHHHHhcc
Confidence            889999995 69999986544

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.50  E-value=2.9e-07  Score=93.70  Aligned_cols=89  Identities=34%  Similarity=0.659  Sum_probs=71.4

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc----EEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...+.||+|+||.||++.... +.    .+|+|.+..... ....++.+|+.++.+++|+|+++++|+|... ...+
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            345566799999999999998643 43    578998875432 2345789999999999999999999998654 4678


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ++||+++|+|.+++..
T Consensus        86 v~e~~~~g~l~~~~~~  101 (303)
T cd05110          86 VTQLMPHGCLLDYVHE  101 (303)
T ss_pred             eehhcCCCCHHHHHHh
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.49  E-value=2.9e-07  Score=98.85  Aligned_cols=86  Identities=19%  Similarity=0.403  Sum_probs=67.6

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC--------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--------D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--------~  542 (579)
                      ..+|...+.||+|+||.||++... .++.||||++....    ....+|+.+|.+++|+|+|++.+++...        .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            456888899999999999999975 47899999885432    2345799999999999999998876432        2


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..++||||++ ++|.+++..
T Consensus       141 ~l~lvmE~~~-~~l~~~~~~  159 (440)
T PTZ00036        141 FLNVVMEFIP-QTVHKYMKH  159 (440)
T ss_pred             EEEEEEecCC-ccHHHHHHH
Confidence            4678999997 577777643

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.48  E-value=8e-07  Score=89.59  Aligned_cols=88  Identities=24%  Similarity=0.464  Sum_probs=67.8

Q ss_pred             cccccceecccCceeEEEEEec--CCcEEEEEEecCCC--cccHHHHHHHHHHHhcC---CCCceeceeEEEEE-----C
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV--EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARL---QHRNLVKLLGCCIQ-----A  541 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~--~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~~-----~  541 (579)
                      +|...++||+|+||.||++...  .++.||+|.++...  ......+.+|+.++..+   +||||++++++|..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            4566679999999999999863  36789999987432  22234677788777665   69999999999853     3


Q ss_pred             CeEEEEEeccCCCCHHHHhcC
Q 008046          542 DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ...++|+||++ ++|.+++..
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~  101 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDK  101 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHh
Confidence            45889999996 699998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.48  E-value=4.9e-07  Score=93.15  Aligned_cols=83  Identities=18%  Similarity=0.278  Sum_probs=70.9

Q ss_pred             eeccc--CceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          480 KLGEG--GFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       480 ~lG~G--~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      +||+|  +||+||++... .++.||+|.+....  ....+.+.+|+.++..++|+||+++++++..++..++|+||+++|
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            56666  99999999874 58999999987432  233467889999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|.+++..
T Consensus        85 ~l~~~l~~   92 (328)
T cd08226          85 SANSLLKT   92 (328)
T ss_pred             CHHHHHHh
Confidence            99999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.48  E-value=2.1e-07  Score=93.40  Aligned_cols=87  Identities=31%  Similarity=0.426  Sum_probs=72.2

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEeccC
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ...+.||+|+||.||+|...+ ++.+++|++..... .......+|+..+.+++ |+|++++++++..++..++|+||+ 
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-   80 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-   80 (283)
T ss_pred             eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence            345789999999999999864 78899999875422 22334567999999999 999999999999999999999999 


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +|+|.+++...
T Consensus        81 ~~~l~~~~~~~   91 (283)
T cd07830          81 EGNLYQLMKDR   91 (283)
T ss_pred             CCCHHHHHHhc
Confidence            88999888653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.48  E-value=7e-07  Score=85.84  Aligned_cols=88  Identities=34%  Similarity=0.489  Sum_probs=77.1

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ...+.||+|++|.||++...+ +..+++|.+...... ..+.+.+|+..+.+++|+|++++++++......++++||+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            345689999999999999876 789999999865444 567899999999999999999999999988999999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      ++|.+++...
T Consensus        82 ~~L~~~~~~~   91 (225)
T smart00221       82 GDLFDYLRKK   91 (225)
T ss_pred             CCHHHHHHhc
Confidence            9999998653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.47  E-value=4.2e-07  Score=94.93  Aligned_cols=83  Identities=14%  Similarity=0.229  Sum_probs=70.7

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .+|...+.||+|+||.||++.... +..||+|.....      ....|+.++.+++|+||+++++++......++|+||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            468888899999999999999754 678999975432      2356999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                       .++|.+++..
T Consensus       140 -~~~l~~~l~~  149 (357)
T PHA03209        140 -SSDLYTYLTK  149 (357)
T ss_pred             -CCcHHHHHHh
Confidence             5789988864

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.47  E-value=6.7e-07  Score=93.41  Aligned_cols=89  Identities=24%  Similarity=0.364  Sum_probs=71.4

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------  542 (579)
                      .++|...+.||+|+||.||++.... +..+|+|.+...  .......+.+|+.++..++|+||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            3678888899999999999998654 889999998643  2234567889999999999999999999886443      


Q ss_pred             eEEEEEeccCCCCHHHHhc
Q 008046          543 ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ..++|+||+++ +|.+.+.
T Consensus       100 ~~~lv~e~~~~-~l~~~~~  117 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIH  117 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHh
Confidence            47999999965 5666553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.47  E-value=5.3e-07  Score=92.96  Aligned_cols=82  Identities=23%  Similarity=0.319  Sum_probs=66.6

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC---CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL---QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ||+|+||.||++.... ++.||+|++....   ......+..|..++...   +||||+++...+......++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999998654 8899999986421   12234556677776655   699999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|..++..
T Consensus        81 g~L~~~l~~   89 (330)
T cd05586          81 GELFWHLQK   89 (330)
T ss_pred             ChHHHHHHh
Confidence            999988864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.46  E-value=5.7e-07  Score=90.07  Aligned_cols=86  Identities=26%  Similarity=0.347  Sum_probs=69.3

Q ss_pred             cccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCC-CCceeceeEEEEEC--CeEEEEEec
Q 008046          476 ASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQA--DESMLIYEY  550 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~--~~~~lV~Ey  550 (579)
                      ...++||+|+||.||++... ++..+|+|.++... .........|+.++.++. |+|++++++++...  +..++|+||
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            34568999999999999865 48899999987542 222335568999999885 99999999999887  889999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ |+|.+++..
T Consensus        82 ~~-~~l~~~l~~   92 (282)
T cd07831          82 MD-MNLYELIKG   92 (282)
T ss_pred             CC-ccHHHHHHh
Confidence            96 688888864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.45  E-value=5.1e-07  Score=91.00  Aligned_cols=88  Identities=24%  Similarity=0.342  Sum_probs=73.0

Q ss_pred             ccccceecccCceeEEEEEec----CCcEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGS----GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~  545 (579)
                      |...+.||+|+||.||++...    ++..+|||.++...    ....+.+.+|+.++.++ +|+|++++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            445578999999999998742    46789999986431    12345788999999999 6999999999988888999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        82 lv~e~~~~~~L~~~~~~   98 (288)
T cd05583          82 LILDYVNGGELFTHLYQ   98 (288)
T ss_pred             EEEecCCCCcHHHHHhh
Confidence            99999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.45  E-value=7.5e-07  Score=92.00  Aligned_cols=83  Identities=22%  Similarity=0.329  Sum_probs=69.4

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCCccc--------------HHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQG--------------MEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      +.||+|+||.||++... .++.||+|.+.......              ...+.+|+.++.+++|+|++++++++...+.
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   94 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF   94 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence            57999999999999865 48899999986432111              1257899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||++ |+|.+++..
T Consensus        95 ~~lv~e~~~-~~l~~~l~~  112 (335)
T PTZ00024         95 INLVMDIMA-SDLKKVVDR  112 (335)
T ss_pred             EEEEEeccc-cCHHHHHHh
Confidence            999999996 799988854

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.45  E-value=3.8e-07  Score=91.65  Aligned_cols=87  Identities=24%  Similarity=0.442  Sum_probs=72.5

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...+.||+|+||.||++... .|..+|+|.++...  ......+.+|+.++.+++|+|++++++++......++|+||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            455678999999999999975 48899999986432  223457889999999999999999999999899999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      + ++|.+++..
T Consensus        82 ~-~~l~~~~~~   91 (284)
T cd07839          82 D-QDLKKYFDS   91 (284)
T ss_pred             C-CCHHHHHHh
Confidence            7 588887754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.44  E-value=5.9e-08  Score=91.47  Aligned_cols=101  Identities=24%  Similarity=0.311  Sum_probs=82.3

Q ss_pred             ccccccceecccCceeEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----CeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~~~l  546 (579)
                      ++|...+.||+|||..||.++ +.+++..|+|++.-...++.+.-++|++.-++++||||++++.++..+     .+.+|
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl  100 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL  100 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence            456677899999999999998 456889999999766667778899999999999999999999887543     35899


Q ss_pred             EEeccCCCCHHHHhcCCCCCCcccCcc
Q 008046          547 IYEYMPNKSLDFFIFDIDWNGLMLTRS  573 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~~~~~~~l~~~  573 (579)
                      ++.|...|+|.+.+...+..+..++..
T Consensus       101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~  127 (302)
T KOG2345|consen  101 LLPYYKRGSLLDEIERLKIKGNFVSEA  127 (302)
T ss_pred             EeehhccccHHHHHHHHhhcCCccCHH
Confidence            999999999999997654444344433

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.43  E-value=9.9e-07  Score=87.34  Aligned_cols=84  Identities=23%  Similarity=0.315  Sum_probs=67.3

Q ss_pred             ceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHh-cCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIA-RLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~-~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.||+|+||.||++... .++.+|+|.++...   ......+..|..++. ..+|+|++++++.+..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            47899999999999875 47899999986432   122334556655544 45899999999999999999999999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      ++|.+++..
T Consensus        82 ~~L~~~l~~   90 (260)
T cd05611          82 GDCASLIKT   90 (260)
T ss_pred             CCHHHHHHH
Confidence            999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.42  E-value=1.1e-06  Score=75.68  Aligned_cols=84  Identities=20%  Similarity=0.353  Sum_probs=58.7

Q ss_pred             EEecCC-eEEEcCC-CcEEEeecCCCC-CCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCce
Q 008046           85 NVTSKG-IVLLDGR-DRIFWSSNTSIT-MKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDR  161 (579)
Q Consensus        85 ~~~~~G-L~l~~~~-~~~~Wst~~~~~-~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~~  161 (579)
                      .+..+| +|+.+.. +.++|++++... .....+.|.++|||||++. .+.++|+|=.   .                  
T Consensus        25 ~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~-~g~~vW~S~t---~------------------   82 (114)
T smart00108       25 IMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDG-DGRVVWSSNT---T------------------   82 (114)
T ss_pred             CCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeC-CCCEEEEecc---c------------------
Confidence            345788 8888764 579999998533 2236789999999999986 4678998711   0                  


Q ss_pred             EEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeec
Q 008046          162 HLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRA  201 (579)
Q Consensus       162 ~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~  201 (579)
                                ...+.|.+.|+++|+.+++-.+ ....|.+
T Consensus        83 ----------~~~~~~~~~L~ddGnlvl~~~~-~~~~W~S  111 (114)
T smart00108       83 ----------GANGNYVLVLLDDGNLVIYDSD-GNFLWQS  111 (114)
T ss_pred             ----------CCCCceEEEEeCCCCEEEECCC-CCEEeCC
Confidence                      1235678999999987664322 3466765

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.42  E-value=1e-06  Score=89.88  Aligned_cols=90  Identities=27%  Similarity=0.457  Sum_probs=72.7

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~l  546 (579)
                      .++|...+.||+|+||.||++.... ++.||+|.++....  .....+.+|+.++.+++|+|++++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            3567777899999999999999754 88999999874322  2234567899999999999999999998654  46899


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||++ ++|.+++..
T Consensus        86 v~e~~~-~~l~~~l~~  100 (309)
T cd07845          86 VMEYCE-QDLASLLDN  100 (309)
T ss_pred             EEecCC-CCHHHHHHh
Confidence            999996 588888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.42  E-value=9e-07  Score=90.29  Aligned_cols=87  Identities=26%  Similarity=0.516  Sum_probs=72.0

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      |...+.||+|+||.||++... ++..+|+|.+...   .....+.+.+|+.+++.++|+|++++.+++......++|+||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            555578999999999999965 4778999998632   223345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +. |+|.+++..
T Consensus        97 ~~-~~l~~~~~~  107 (308)
T cd06634          97 CL-GSASDLLEV  107 (308)
T ss_pred             cC-CCHHHHHHH
Confidence            96 688877753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.41  E-value=5.5e-07  Score=93.12  Aligned_cols=90  Identities=26%  Similarity=0.448  Sum_probs=72.8

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcC-CCCceeceeEEEEEC--CeEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA--DESM  545 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~--~~~~  545 (579)
                      .++|...+.||+|+||.||+|... .+..+|+|++...  .......+..|+.++.++ +|+||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            356677789999999999999975 4788999988542  223345678899999999 999999999988653  4689


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||++ ++|.+++..
T Consensus        86 lv~e~~~-~~L~~~~~~  101 (337)
T cd07852          86 LVFEYME-TDLHAVIRA  101 (337)
T ss_pred             EEecccc-cCHHHHHhc
Confidence            9999997 699988854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.41  E-value=1e-06  Score=91.42  Aligned_cols=91  Identities=20%  Similarity=0.365  Sum_probs=73.5

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----  542 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----  542 (579)
                      ..++|...+.||+|+||.||++... ++..||||++....  ....+.+.+|+.++.+++|+||+++++++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            4567888889999999999999854 58899999986432  223457889999999999999999999886543     


Q ss_pred             -eEEEEEeccCCCCHHHHhcC
Q 008046          543 -ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 -~~~lV~Ey~~~GsL~~~l~~  562 (579)
                       ..++|+||+ +++|.+++..
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~  112 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH  112 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc
Confidence             458999999 7799888753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=5e-08  Score=108.89  Aligned_cols=99  Identities=20%  Similarity=0.253  Sum_probs=83.1

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA  541 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~  541 (579)
                      .++....++|...+.||+|+||.|...+++. +..+|+|++.+.   ......-|..|-.+|.--..+.||.|.-.+...
T Consensus        68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~  147 (1317)
T KOG0612|consen   68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE  147 (1317)
T ss_pred             HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence            4445556788888999999999999999865 788999999863   234456788899999998999999998888888


Q ss_pred             CeEEEEEeccCCCCHHHHhcCCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      .++|+|||||+||+|-.+|.+-.
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk~~  170 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSKFD  170 (1317)
T ss_pred             cceEEEEecccCchHHHHHhhcC
Confidence            99999999999999999996544

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.40  E-value=1.2e-06  Score=89.48  Aligned_cols=80  Identities=25%  Similarity=0.407  Sum_probs=65.6

Q ss_pred             ceecccCceeEEEEEecC---CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE---GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV~Ey~~~  553 (579)
                      .+||+|+||.||++...+   +..+|+|.+...  .....+.+|+.++.+++|+|++++.+++..  ....++|+||++ 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence            589999999999998653   568999998643  223568899999999999999999998854  456889999986 


Q ss_pred             CCHHHHhc
Q 008046          554 KSLDFFIF  561 (579)
Q Consensus       554 GsL~~~l~  561 (579)
                      ++|.+++.
T Consensus        84 ~~l~~~~~   91 (317)
T cd07867          84 HDLWHIIK   91 (317)
T ss_pred             CcHHHHHH
Confidence            57877774

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PRK10345 hypothetical protein; Provisional

Probab=98.39  E-value=1.4e-06  Score=83.29  Aligned_cols=84  Identities=19%  Similarity=0.273  Sum_probs=66.0

Q ss_pred             ccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-----CCCceeceeEEEEECC---eEE-EE
Q 008046          477 SYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-----QHRNLVKLLGCCIQAD---ESM-LI  547 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-----~H~nlv~l~g~~~~~~---~~~-lV  547 (579)
                      ..+.||+|+||.||.  +++....+||++........+.+.+|+.++..+     .||||++++|+...+.   ..+ +|
T Consensus         6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            446899999999996  444333479988754444567899999999999     5799999999998763   333 78


Q ss_pred             Eec--cCCCCHHHHhcC
Q 008046          548 YEY--MPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey--~~~GsL~~~l~~  562 (579)
                      +||  ++.|+|.+++.+
T Consensus        84 ~e~~G~~~~tL~~~l~~  100 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQ  100 (210)
T ss_pred             ecCCCCcchhHHHHHHc
Confidence            999  668999999964

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.39  E-value=1.3e-06  Score=88.74  Aligned_cols=89  Identities=22%  Similarity=0.402  Sum_probs=71.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECC-------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-------  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-------  542 (579)
                      ++|...++||+|+||.||++... +++.+|+|.+....  ......+.+|+.++++++|||++++++++...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            46777789999999999999865 48899999986432  222345678999999999999999999987654       


Q ss_pred             -eEEEEEeccCCCCHHHHhcC
Q 008046          543 -ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 -~~~lV~Ey~~~GsL~~~l~~  562 (579)
                       ..++|+||++ ++|.+++..
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~  111 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSN  111 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHh
Confidence             3499999996 588887754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.39  E-value=1.2e-06  Score=89.59  Aligned_cols=80  Identities=24%  Similarity=0.410  Sum_probs=65.6

Q ss_pred             ceecccCceeEEEEEec---CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLV---EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV~Ey~~~  553 (579)
                      ++||+|+||.||++...   .++.+|+|.++..  .....+.+|+.++.+++||||+++++.+..  ....++|+||+. 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-   83 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence            58999999999999864   3578999998643  223567899999999999999999998754  456889999995 


Q ss_pred             CCHHHHhc
Q 008046          554 KSLDFFIF  561 (579)
Q Consensus       554 GsL~~~l~  561 (579)
                      ++|.+++.
T Consensus        84 ~~l~~~~~   91 (317)
T cd07868          84 HDLWHIIK   91 (317)
T ss_pred             CCHHHHHH
Confidence            58888775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.38  E-value=8.3e-07  Score=87.13  Aligned_cols=83  Identities=28%  Similarity=0.354  Sum_probs=71.9

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      ||+|+||.||++.... ++.+|+|.+.....   ...+.+..|+.++++++|+|++++++.+..+...++|+||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6899999999999754 88999999875422   2456899999999999999999999999989999999999999999


Q ss_pred             HHHhcCC
Q 008046          557 DFFIFDI  563 (579)
Q Consensus       557 ~~~l~~~  563 (579)
                      .+++...
T Consensus        81 ~~~l~~~   87 (250)
T cd05123          81 FSHLSKE   87 (250)
T ss_pred             HHHHHhc
Confidence            9998643

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.37  E-value=1.8e-06  Score=74.60  Aligned_cols=84  Identities=21%  Similarity=0.366  Sum_probs=59.6

Q ss_pred             Eec-CC-eEEEcCC-CcEEEeecCCCC-CCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCce
Q 008046           86 VTS-KG-IVLLDGR-DRIFWSSNTSIT-MKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDR  161 (579)
Q Consensus        86 ~~~-~G-L~l~~~~-~~~~Wst~~~~~-~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~~  161 (579)
                      ... +| ||+.+.. +.++|++|+... .....+.|.++|||||++. .+.++|+|=..                     
T Consensus        26 ~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~-~g~~vW~S~~~---------------------   83 (116)
T cd00028          26 MQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDG-SGTVVWSSNTT---------------------   83 (116)
T ss_pred             CCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcC-CCcEEEEeccc---------------------
Confidence            344 88 8887754 579999998542 3456789999999999986 46789987321                     


Q ss_pred             EEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecC
Q 008046          162 HLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAG  202 (579)
Q Consensus       162 ~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g  202 (579)
                                .+.+.+.+.|+++|+..++-.+ ....|.+.
T Consensus        84 ----------~~~~~~~~~L~ddGnlvl~~~~-~~~~W~Sf  113 (116)
T cd00028          84 ----------RVNGNYVLVLLDDGNLVLYDSD-GNFLWQSF  113 (116)
T ss_pred             ----------CCCCceEEEEeCCCCEEEECCC-CCEEEcCC
Confidence                      0246688999999986665332 35677764

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.37  E-value=1.5e-06  Score=91.01  Aligned_cols=89  Identities=20%  Similarity=0.331  Sum_probs=71.3

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~  542 (579)
                      .++|...+.||+|+||.||++... .++.+|||++...  .....+.+.+|+.++..++|+|++++++.+...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            467888889999999999999864 4788999999743  223346788999999999999999999887543      3


Q ss_pred             eEEEEEeccCCCCHHHHhc
Q 008046          543 ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ..++||||++ ++|.+++.
T Consensus       103 ~~~lv~e~~~-~~l~~~~~  120 (364)
T cd07875         103 DVYIVMELMD-ANLCQVIQ  120 (364)
T ss_pred             eEEEEEeCCC-CCHHHHHH
Confidence            5799999996 46776663

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.37  E-value=9.8e-07  Score=91.51  Aligned_cols=89  Identities=24%  Similarity=0.368  Sum_probs=73.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC----------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA----------  541 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~----------  541 (579)
                      .+|...+.||+|+||.||++... .+..||+|.+........+.+.+|++++.+++|+||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            46777789999999999999865 4889999998765555567899999999999999999998765543          


Q ss_pred             ----CeEEEEEeccCCCCHHHHhcC
Q 008046          542 ----DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ----~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                          ...++|+||++ ++|.+++..
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~  108 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ  108 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc
Confidence                35789999997 589887753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.36  E-value=1e-06  Score=93.20  Aligned_cols=83  Identities=16%  Similarity=0.251  Sum_probs=69.8

Q ss_pred             ccccccceecccCceeEEEEEecC---CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE---GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ..|...+.||+|+||.||++...+   +..||+|.+...     +.+.+|+.++.+++|+|||++++.+......++|+|
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            457777899999999999987532   567999987643     345689999999999999999999998999999999


Q ss_pred             ccCCCCHHHHhc
Q 008046          550 YMPNKSLDFFIF  561 (579)
Q Consensus       550 y~~~GsL~~~l~  561 (579)
                      |+. ++|.+++.
T Consensus       167 ~~~-~~l~~~l~  177 (392)
T PHA03207        167 KYK-CDLFTYVD  177 (392)
T ss_pred             hcC-CCHHHHHH
Confidence            995 78988883

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.36  E-value=1e-06  Score=89.31  Aligned_cols=89  Identities=20%  Similarity=0.394  Sum_probs=71.8

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...+.||+|+||.||++.... ++.+|||.++... .....++..|+.++.+.+ |+|++++++++......++|+|
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            345566799999999999999865 8899999997542 233456778888777775 9999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |++ ++|.+++..
T Consensus        95 ~~~-~~l~~l~~~  106 (296)
T cd06618          95 LMS-TCLDKLLKR  106 (296)
T ss_pred             ccC-cCHHHHHHH
Confidence            985 577776644

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.36  E-value=1.8e-06  Score=89.70  Aligned_cols=97  Identities=22%  Similarity=0.350  Sum_probs=77.2

Q ss_pred             HHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC
Q 008046          465 FASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA  541 (579)
Q Consensus       465 ~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~  541 (579)
                      ..++...+++|...+.||+|+||.||++... ++..||+|++....  ....+.+.+|+.++.+++|+||+++.+++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            3556677889999899999999999999854 58899999987432  22345788999999999999999999987643


Q ss_pred             ------CeEEEEEeccCCCCHHHHhcC
Q 008046          542 ------DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ------~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                            ...++++|++ +++|.+++..
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~  114 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC  114 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc
Confidence                  2467888876 7899887753

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.35  E-value=1.4e-06  Score=90.02  Aligned_cols=90  Identities=21%  Similarity=0.371  Sum_probs=72.7

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----CeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~~  544 (579)
                      +++|...++||+|+||.||++... +++.||+|.+.... ......+..|+.++.+++|+|++++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            457888889999999999999864 58899999986432 23346788999999999999999999987654     357


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||++ ++|.+++..
T Consensus        84 ~lv~e~~~-~~l~~~~~~  100 (336)
T cd07849          84 YIVQELME-TDLYKLIKT  100 (336)
T ss_pred             EEEehhcc-cCHHHHHhc
Confidence            99999996 588877753

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.35  E-value=2.5e-06  Score=85.69  Aligned_cols=83  Identities=25%  Similarity=0.316  Sum_probs=64.2

Q ss_pred             eecccCceeEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHH---hcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          480 KLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG---QGMEEFKNEVTLI---ARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l---~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      .||+|+||.||++... +++.+|+|.+.....   .....+..|..++   ...+|+|++++.+.+...+..++|+||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4799999999999875 488999999864321   1223344554433   33479999999999988889999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        81 ~~~L~~~i~~   90 (279)
T cd05633          81 GGDLHYHLSQ   90 (279)
T ss_pred             CCCHHHHHHh
Confidence            9999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.34  E-value=5.9e-08  Score=101.89  Aligned_cols=89  Identities=25%  Similarity=0.452  Sum_probs=76.3

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.....||.|+||.|||++.++ +-..|.|.+...+....++|+-|++|+...+||+||+|++.+...+.++|+.|||.+
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            3444689999999999999765 445678888766677788999999999999999999999988888899999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |..+..+...
T Consensus       114 GAVDaimlEL  123 (1187)
T KOG0579|consen  114 GAVDAIMLEL  123 (1187)
T ss_pred             chHhHHHHHh
Confidence            9998887643

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.34  E-value=1.1e-06  Score=91.14  Aligned_cols=89  Identities=24%  Similarity=0.379  Sum_probs=71.5

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~  542 (579)
                      .++|...+.||+|+||.||++... .+..||||.+....  ....+.+.+|+.++.+++|+||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            456777889999999999999864 47899999987432  22345688999999999999999999877532      3


Q ss_pred             eEEEEEeccCCCCHHHHhc
Q 008046          543 ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ..++++|++ +++|.+++.
T Consensus        94 ~~~~~~~~~-~~~l~~~~~  111 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVK  111 (343)
T ss_pred             cEEEEeecC-CCCHHHHHh
Confidence            578999988 789988774

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.34  E-value=2.5e-07  Score=92.40  Aligned_cols=96  Identities=24%  Similarity=0.350  Sum_probs=77.2

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      .+|....+++.....+.+|.||.||.|.+.+      .+.|-||.++... +-....|+.|...+..+.|||+..+.|.+
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            3444555667777789999999999996543      4567888887553 33456899999999999999999999999


Q ss_pred             EEC-CeEEEEEeccCCCCHHHHhc
Q 008046          539 IQA-DESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       539 ~~~-~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ++. ...+++|.++.-|+|..||.
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~  380 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQ  380 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHH
Confidence            874 45788899999999999997

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.34  E-value=1.3e-06  Score=90.94  Aligned_cols=90  Identities=21%  Similarity=0.340  Sum_probs=71.4

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------  541 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------  541 (579)
                      ..++|...+.||+|+||.||++... .++.+|+|.+...  .....+.+.+|+.++..++|+||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            3467888889999999999999864 4789999999743  223346788999999999999999999987543      


Q ss_pred             CeEEEEEeccCCCCHHHHhc
Q 008046          542 DESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ...++|+||+++ +|.+.+.
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~  113 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ  113 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh
Confidence            347999999964 6766653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.34  E-value=1.7e-06  Score=89.71  Aligned_cols=87  Identities=28%  Similarity=0.480  Sum_probs=70.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------e
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------E  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------~  543 (579)
                      ++|...+.||+|+||.||++... +++.+|+|++...  .......+.+|+.++.+++|+||+++.+++....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            67877889999999999999864 5889999998643  1223457889999999999999999999886542      4


Q ss_pred             EEEEEeccCCCCHHHHh
Q 008046          544 SMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l  560 (579)
                      .++|+||+. .+|..++
T Consensus        95 ~~lv~e~~~-~~l~~~~  110 (342)
T cd07879          95 FYLVMPYMQ-TDLQKIM  110 (342)
T ss_pred             EEEEecccc-cCHHHHH
Confidence            689999996 4777654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.34  E-value=2.4e-06  Score=85.90  Aligned_cols=87  Identities=25%  Similarity=0.469  Sum_probs=66.8

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcC---CCCceeceeEEEEE-----CCe
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARL---QHRNLVKLLGCCIQ-----ADE  543 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~~-----~~~  543 (579)
                      |...+.||+|+||.||++... .++.||+|.++....  .....+.+|+.++..+   +|+|++++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            455679999999999999875 488999999874321  2234566777777655   79999999998764     235


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||++ ++|.+++..
T Consensus        82 ~~lv~e~~~-~~l~~~~~~   99 (288)
T cd07863          82 VTLVFEHVD-QDLRTYLDK   99 (288)
T ss_pred             EEEEEcccc-cCHHHHHHh
Confidence            789999997 589888864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.34  E-value=1.3e-06  Score=89.19  Aligned_cols=83  Identities=17%  Similarity=0.169  Sum_probs=68.5

Q ss_pred             eecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHH
Q 008046          480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      .+|.|+++.|+++.. +++.+|+|++...  .....+.+..|+.++..++|+||+++++++...+..++++||+++|+|.
T Consensus         9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   87 (314)
T cd08216           9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE   87 (314)
T ss_pred             hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence            445556666666655 5889999998744  3345568999999999999999999999999999999999999999999


Q ss_pred             HHhcCC
Q 008046          558 FFIFDI  563 (579)
Q Consensus       558 ~~l~~~  563 (579)
                      +++...
T Consensus        88 ~~l~~~   93 (314)
T cd08216          88 DLLKTH   93 (314)
T ss_pred             HHHHHh
Confidence            998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.33  E-value=1.7e-06  Score=87.13  Aligned_cols=84  Identities=25%  Similarity=0.398  Sum_probs=68.2

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...++||+|+||.||++.... ++.+|+|.+.... ......+.+|+.++.++. |+|++++++++......++++||+
T Consensus         6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~   85 (288)
T cd06616           6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM   85 (288)
T ss_pred             hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence            3344689999999999998654 7899999987432 234567899999999996 999999999998888999999998


Q ss_pred             CCCCHHHH
Q 008046          552 PNKSLDFF  559 (579)
Q Consensus       552 ~~GsL~~~  559 (579)
                      . ++|.++
T Consensus        86 ~-~~l~~l   92 (288)
T cd06616          86 D-ISLDKF   92 (288)
T ss_pred             c-CCHHHH
Confidence            6 465554

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.32  E-value=3.5e-08  Score=92.67  Aligned_cols=88  Identities=25%  Similarity=0.393  Sum_probs=72.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +.|..-++||+|.|..|++.... .|+..|+|.+...  +..+.+++.+|++|.+.++|||||+|..-..+....+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            34555578999999999988753 4888888877532  33467889999999999999999999998888889999999


Q ss_pred             ccCCCCHHHHh
Q 008046          550 YMPNKSLDFFI  560 (579)
Q Consensus       550 y~~~GsL~~~l  560 (579)
                      +|.+|+|..-|
T Consensus        91 ~m~G~dl~~eI  101 (355)
T KOG0033|consen   91 LVTGGELFEDI  101 (355)
T ss_pred             cccchHHHHHH
Confidence            99999986544

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.32  E-value=2.7e-06  Score=84.86  Aligned_cols=86  Identities=19%  Similarity=0.180  Sum_probs=63.7

Q ss_pred             ccccccce--ecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNK--LGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~--lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.  ||+|+||.||++... .+..+|+|.+........     |+.....+ +|+|++++++.+...+..++|+
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence            44444444  499999999999864 477899998864321111     22222212 7999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus        89 e~~~~~~L~~~l~~~  103 (267)
T PHA03390         89 DYIKDGDLFDLLKKE  103 (267)
T ss_pred             EcCCCCcHHHHHHhc
Confidence            999999999999653

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.32  E-value=1.5e-06  Score=89.80  Aligned_cols=89  Identities=18%  Similarity=0.406  Sum_probs=72.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----CeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~~  544 (579)
                      +.|...+.||+|+||.||++... .+..||+|.+...  .......+.+|+.++..++|+|++++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            45777789999999999999864 4889999998743  223345778999999999999999999987653     347


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+. ++|.+++..
T Consensus        85 ~lv~e~~~-~~L~~~~~~  101 (337)
T cd07858          85 YIVYELMD-TDLHQIIRS  101 (337)
T ss_pred             EEEEeCCC-CCHHHHHhc
Confidence            99999996 789888754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.31  E-value=1.4e-06  Score=90.07  Aligned_cols=89  Identities=15%  Similarity=0.357  Sum_probs=72.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEE----CCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----ADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----~~~~~  545 (579)
                      ++|...+.||+|+||.||++... .+..||+|++....  ....+.+.+|+.++.+++|+||+++.+++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            56777789999999999999865 48899999987532  2345678899999999999999999987653    34689


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+. |+|.+++..
T Consensus        85 lv~e~~~-~~l~~~~~~  100 (334)
T cd07855          85 VVMDLME-SDLHHIIHS  100 (334)
T ss_pred             EEEehhh-hhHHHHhcc
Confidence            9999995 689888853

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.31  E-value=9.4e-07  Score=90.98  Aligned_cols=87  Identities=22%  Similarity=0.381  Sum_probs=73.3

Q ss_pred             ccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----eEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----ESML  546 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----~~~l  546 (579)
                      |...+.||+|+||.||++.... +..+|+|++....  ....+.+..|+.++..++|+||+++.+++....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            4556799999999999999754 8899999987543  334568999999999999999999999987765     7899


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||++ ++|.+++..
T Consensus        82 v~e~~~-~~l~~~l~~   96 (330)
T cd07834          82 VTELME-TDLHKVIKS   96 (330)
T ss_pred             Eecchh-hhHHHHHhC
Confidence            999997 589888864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.30  E-value=1.1e-06  Score=87.96  Aligned_cols=87  Identities=29%  Similarity=0.452  Sum_probs=74.0

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ...+.||+|.||.||+++... ++.+|+|.+....  ....+.+..|+.++++++|+|++++.+++...+..++|+||++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            344689999999999999765 8899999997542  2334678899999999999999999999998899999999997


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                       ++|.+++...
T Consensus        82 -~~l~~~i~~~   91 (282)
T cd07829          82 -MDLKKYLDKR   91 (282)
T ss_pred             -cCHHHHHHhh
Confidence             6999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.28  E-value=3.1e-06  Score=88.15  Aligned_cols=89  Identities=24%  Similarity=0.368  Sum_probs=72.1

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~  542 (579)
                      .+.|...+.||+|+||.||++... .++.+|+|.+...  .....+.+.+|+.++.+++|+|++++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            467888889999999999999865 5889999998643  223345788999999999999999999987543      3


Q ss_pred             eEEEEEeccCCCCHHHHhc
Q 008046          543 ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ..++|+||+. ++|.+.+.
T Consensus        95 ~~~lv~e~~~-~~l~~~~~  112 (353)
T cd07850          95 DVYLVMELMD-ANLCQVIQ  112 (353)
T ss_pred             cEEEEEeccC-CCHHHHHh
Confidence            5799999995 58888764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.27  E-value=2.8e-06  Score=85.18  Aligned_cols=86  Identities=26%  Similarity=0.473  Sum_probs=68.6

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCCCc--ccHHHHHHHHHHHhcC---CCCceeceeEEEEECCe-----E
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG--QGMEEFKNEVTLIARL---QHRNLVKLLGCCIQADE-----S  544 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~~~~~-----~  544 (579)
                      ...+.||+|+||.||++.... +..+|+|+++....  .....+.+|+.++.++   .|+|++++.+++...+.     .
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   81 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL   81 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence            445789999999999999865 88999999974322  2234677788776655   69999999999988776     8


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++++||++ ++|.+++..
T Consensus        82 ~l~~e~~~-~~l~~~l~~   98 (287)
T cd07838          82 TLVFEHVD-QDLATYLSK   98 (287)
T ss_pred             EEEehhcc-cCHHHHHHH
Confidence            99999996 589988864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.27  E-value=4.1e-06  Score=84.06  Aligned_cols=83  Identities=27%  Similarity=0.328  Sum_probs=64.5

Q ss_pred             eecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHH---HHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVT---LIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~---~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      .||+|+||.||++.... ++.||+|.+.....   .....+..|..   .+...+|++++++.+.+...+..++|+||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            47999999999998654 78999999865321   22223444543   3444679999999999999999999999999


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      +|+|.+++..
T Consensus        81 g~~L~~~l~~   90 (278)
T cd05606          81 GGDLHYHLSQ   90 (278)
T ss_pred             CCcHHHHHHh
Confidence            9999988854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.23  E-value=1.7e-06  Score=86.09  Aligned_cols=90  Identities=21%  Similarity=0.400  Sum_probs=72.4

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE-----CCeEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-----ADESM  545 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-----~~~~~  545 (579)
                      .|...+.||+|+||.|.++.... |..||||++...  ..-..+.-.+|+++++.++|+||+.+......     -+..|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            34445789999999999998654 889999999733  33445678899999999999999999988765     34689


Q ss_pred             EEEeccCCCCHHHHhcCCC
Q 008046          546 LIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +|+|+| .-+|.+.|...+
T Consensus       103 iV~elM-etDL~~iik~~~  120 (359)
T KOG0660|consen  103 LVFELM-ETDLHQIIKSQQ  120 (359)
T ss_pred             EehhHH-hhHHHHHHHcCc
Confidence            999999 568988886543

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.23  E-value=1.8e-06  Score=91.99  Aligned_cols=93  Identities=22%  Similarity=0.407  Sum_probs=76.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-C-----CceeceeEEEEECCeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-H-----RNLVKLLGCCIQADESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~nlv~l~g~~~~~~~~~l  546 (579)
                      .|...+.||+|.||+|.|+... .++.||||+++.. ..-..+-..|+.+|..++ |     -|+|+++.++..+++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            4566789999999999999854 4899999999854 333456678999998886 4     499999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCCCCc
Q 008046          547 IYEYMPNKSLDFFIFDIDWNGL  568 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~~~~~~  568 (579)
                      |+|.+ .-+|.+||...+....
T Consensus       266 VfELL-~~NLYellK~n~f~Gl  286 (586)
T KOG0667|consen  266 VFELL-STNLYELLKNNKFRGL  286 (586)
T ss_pred             eehhh-hhhHHHHHHhcCCCCC
Confidence            99988 4699999987666553

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.22  E-value=2.9e-06  Score=84.90  Aligned_cols=85  Identities=29%  Similarity=0.469  Sum_probs=72.0

Q ss_pred             ccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          477 SYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ..+.||+|++|.||++... ++..+++|++.....  .....+..|+.++++++|+|++++++++..+...++|+||++ 
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-   81 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-   81 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-
Confidence            3468999999999999875 478899999875422  235678899999999999999999999999999999999997 


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      ++|.+++..
T Consensus        82 ~~l~~~l~~   90 (283)
T cd05118          82 TDLYKLIKD   90 (283)
T ss_pred             CCHHHHHHh
Confidence            488888865

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.22  E-value=8.2e-06  Score=76.85  Aligned_cols=83  Identities=34%  Similarity=0.573  Sum_probs=72.6

Q ss_pred             ecccCceeEEEEEecC-CcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHHH
Q 008046          481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDF  558 (579)
Q Consensus       481 lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~  558 (579)
                      ||+|.+|.||++.... ++.+++|........ ..+.+.+|+..+..++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999865 889999998754332 35689999999999999999999999998899999999999999999


Q ss_pred             HhcCC
Q 008046          559 FIFDI  563 (579)
Q Consensus       559 ~l~~~  563 (579)
                      ++...
T Consensus        81 ~~~~~   85 (215)
T cd00180          81 LLKEN   85 (215)
T ss_pred             HHHhc
Confidence            98653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PTZ00284 protein kinase; Provisional

Probab=98.21  E-value=4.8e-06  Score=90.25  Aligned_cols=95  Identities=20%  Similarity=0.231  Sum_probs=71.6

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCC------CceeceeEEE
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH------RNLVKLLGCC  538 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H------~nlv~l~g~~  538 (579)
                      +++...+++|...++||+|+||.||++.... ++.||||+++.. ....+++..|+.++.+++|      .+++++..++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            3444566789988999999999999998754 788999999643 2233456677777776654      4588888887


Q ss_pred             EEC-CeEEEEEeccCCCCHHHHhcC
Q 008046          539 IQA-DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       539 ~~~-~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ... .+.++|+|++ +++|.+++..
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~  224 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMK  224 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHH
Confidence            654 5788999988 7788888864

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.20  E-value=4.3e-06  Score=85.03  Aligned_cols=90  Identities=24%  Similarity=0.443  Sum_probs=71.4

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECC------
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------  542 (579)
                      .++|...++||+|+||.||++... +++.+|+|++.....  .....+.+|++++.+++|+||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            467888889999999999999965 478999999864322  22346789999999999999999998875433      


Q ss_pred             --eEEEEEeccCCCCHHHHhcC
Q 008046          543 --ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 --~~~lV~Ey~~~GsL~~~l~~  562 (579)
                        ..++|+||+. ++|...+..
T Consensus        87 ~~~~~lv~~~~~-~~l~~~~~~  107 (311)
T cd07866          87 RGSVYMVTPYMD-HDLSGLLEN  107 (311)
T ss_pred             CceEEEEEecCC-cCHHHHHhc
Confidence              4699999996 477777754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.18  E-value=4.3e-06  Score=81.05  Aligned_cols=79  Identities=25%  Similarity=0.389  Sum_probs=69.7

Q ss_pred             CceeEEEEEecC-CcEEEEEEecCCCccc-HHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          485 GFGPVYKGTLVE-GQEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       485 ~fG~V~kg~~~~-g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +||.||++.... ++.+++|.+....... .+.+.+|++.+.+++|+|++++.+.+......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999865 8899999997654433 67999999999999999999999999999999999999999999999865


Q ss_pred             C
Q 008046          563 I  563 (579)
Q Consensus       563 ~  563 (579)
                      .
T Consensus        81 ~   81 (244)
T smart00220       81 R   81 (244)
T ss_pred             c
Confidence            3

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.16  E-value=3.2e-06  Score=87.69  Aligned_cols=90  Identities=23%  Similarity=0.422  Sum_probs=73.3

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe-----
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE-----  543 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~-----  543 (579)
                      .++|...+.||+|+||.||++.... +..+|+|++...  .....+.+.+|+.++++++|+|++++.++....+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            4667778899999999999999754 789999998643  22234567889999999999999999987765554     


Q ss_pred             -EEEEEeccCCCCHHHHhcC
Q 008046          544 -SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 -~~lV~Ey~~~GsL~~~l~~  562 (579)
                       .++|+||+ +++|.+++..
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~  112 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC  112 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc
Confidence             89999999 6799988854

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.15  E-value=7e-07  Score=86.82  Aligned_cols=88  Identities=24%  Similarity=0.454  Sum_probs=69.8

Q ss_pred             cccccceecccCceeEEEEEecC---Cc--EEEEEEecCCCc-cc-HHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE---GQ--EIAVKRLSKGSG-QG-MEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESM  545 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~---g~--~vAvK~l~~~~~-~~-~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~  545 (579)
                      .|....+||+|.||.|||++-.+   .+  .+|+|+++.... .+ ...-.+|+.+++.++|+||+.|..+... +...+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            45556789999999999997433   22  689999975422 12 3467899999999999999999988777 77889


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      |++||.++ +|...|+.
T Consensus       105 l~fdYAEh-DL~~II~f  120 (438)
T KOG0666|consen  105 LLFDYAEH-DLWHIIKF  120 (438)
T ss_pred             EEehhhhh-hHHHHHHH
Confidence            99999987 88888854

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.15  E-value=7.6e-06  Score=78.48  Aligned_cols=83  Identities=14%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcc--------cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ--------GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.||+|++|.||+|.. .+..+++|........        ....+.+|+.++..++|++++....++......++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 6678999986533211        123578999999999999998888887777888999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|.+++..
T Consensus        81 ~~G~~L~~~~~~   92 (211)
T PRK14879         81 IEGEPLKDLINS   92 (211)
T ss_pred             eCCcCHHHHHHh
Confidence            999999988854

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.12  E-value=1e-06  Score=99.55  Aligned_cols=80  Identities=29%  Similarity=0.513  Sum_probs=64.2

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      -..+|.+.+.||+||||.|||++.+ +|+.+|||+|.... ........+|+.++++++|||+|+.+..+.+.....-++
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            3456888889999999999999965 69999999998543 233457889999999999999999999888766555444


Q ss_pred             ec
Q 008046          549 EY  550 (579)
Q Consensus       549 Ey  550 (579)
                      |-
T Consensus       557 ei  558 (1351)
T KOG1035|consen  557 EI  558 (1351)
T ss_pred             cc
Confidence            43

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.11  E-value=1.2e-06  Score=83.53  Aligned_cols=93  Identities=25%  Similarity=0.355  Sum_probs=72.4

Q ss_pred             ccccCHHHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc-ccHHHHHHHHHHH-hcCCCCceeceeE
Q 008046          460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG-QGMEEFKNEVTLI-ARLQHRNLVKLLG  536 (579)
Q Consensus       460 ~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~~l-~~l~H~nlv~l~g  536 (579)
                      +..|+..+|+.       ...||+|+||.|+|..++. |+..|||+++.... .+.+.|+.|.++. +.-..||||+++|
T Consensus        58 ~~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG  130 (361)
T KOG1006|consen   58 LHTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG  130 (361)
T ss_pred             ccccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence            34455554443       3589999999999999865 89999999986533 4456899998755 4457999999999


Q ss_pred             EEEECCeEEEEEeccCCCCHHHHh
Q 008046          537 CCIQADESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       537 ~~~~~~~~~lV~Ey~~~GsL~~~l  560 (579)
                      .+......+|-||.|. -||+.+-
T Consensus       131 a~F~EGdcWiCMELMd-~SlDklY  153 (361)
T KOG1006|consen  131 ALFSEGDCWICMELMD-ISLDKLY  153 (361)
T ss_pred             hhhcCCceeeeHHHHh-hhHHHHH
Confidence            9998889999999994 5776553

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.09  E-value=5.1e-06  Score=90.76  Aligned_cols=89  Identities=21%  Similarity=0.385  Sum_probs=67.1

Q ss_pred             cccccccceecccCceeEEEEEecC--CcEEEEE------------------EecCCCcccHHHHHHHHHHHhcCCCCce
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE--GQEIAVK------------------RLSKGSGQGMEEFKNEVTLIARLQHRNL  531 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~--g~~vAvK------------------~l~~~~~~~~~~f~~E~~~l~~l~H~nl  531 (579)
                      .++|...++||+|+||.||++....  +...+.|                  .+. ........+.+|+.+|.+++|+||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence            4578888999999999999987533  1112222                  111 112234568899999999999999


Q ss_pred             eceeEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          532 VKLLGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       532 v~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      |++++++...+..++|+|++. ++|.+++.+
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~  255 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYD  255 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhh
Confidence            999999999999999999984 678888764

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.09  E-value=6.6e-07  Score=101.51  Aligned_cols=93  Identities=25%  Similarity=0.394  Sum_probs=78.1

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .+-++....+||.|.||.||-+... .|...|+|.++-.  ..........|+.++..+.|||+|+.+|+-.+++..+|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            3445666789999999999999854 4888999988643  223345788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      ||||++|+|.+.+...
T Consensus      1313 MEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHG 1328 (1509)
T ss_pred             HHHhccCcHHHHHHhc
Confidence            9999999999998643

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.07  E-value=5.8e-06  Score=78.07  Aligned_cols=79  Identities=18%  Similarity=0.179  Sum_probs=56.3

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcc--c-------HHHH-----------------HHHHHHHhcCCCCcee
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ--G-------MEEF-----------------KNEVTLIARLQHRNLV  532 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~--~-------~~~f-----------------~~E~~~l~~l~H~nlv  532 (579)
                      ..||+|+||.||++...+|+.||||.++.....  .       ...|                 ..|++.+.++.|+++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            589999999999999888999999999754211  1       1122                 3489999999877764


Q ss_pred             ceeEEEEECCeEEEEEeccCCCCHHHH
Q 008046          533 KLLGCCIQADESMLIYEYMPNKSLDFF  559 (579)
Q Consensus       533 ~l~g~~~~~~~~~lV~Ey~~~GsL~~~  559 (579)
                      .....  .....+|||||+++++|...
T Consensus        83 ~p~~~--~~~~~~iVmE~i~g~~l~~~  107 (190)
T cd05147          83 CPEPI--LLKSHVLVMEFIGDDGWAAP  107 (190)
T ss_pred             CCcEE--EecCCEEEEEEeCCCCCcch
Confidence            43332  22234899999998877654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.06  E-value=1.2e-05  Score=76.35  Aligned_cols=82  Identities=21%  Similarity=0.308  Sum_probs=64.2

Q ss_pred             eecccCceeEEEEEecCCcEEEEEEecCCCc---c-----cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG---Q-----GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~---~-----~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .||+|+||.||++.. ++..+++|.......   +     ..+.+.+|+.++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            379999999999985 567899998653211   1     1256788999999999887766666666777789999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        80 ~g~~l~~~~~~   90 (199)
T TIGR03724        80 EGKPLKDVIEE   90 (199)
T ss_pred             CCccHHHHHhh
Confidence            99999988754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.04  E-value=6e-07  Score=95.30  Aligned_cols=90  Identities=24%  Similarity=0.456  Sum_probs=78.2

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .++|.....+|.|.+|.|||++... +...|+|.++.......+...+|+-+++..+|+|||.++|-...+...++.|||
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            3456666789999999999999644 788999999866566677788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhc
Q 008046          551 MPNKSLDFFIF  561 (579)
Q Consensus       551 ~~~GsL~~~l~  561 (579)
                      +.+|+|.+.-+
T Consensus        94 cgggslQdiy~  104 (829)
T KOG0576|consen   94 CGGGSLQDIYH  104 (829)
T ss_pred             cCCCcccceee
Confidence            99999988655

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.04  E-value=1.4e-05  Score=77.06  Aligned_cols=88  Identities=13%  Similarity=0.114  Sum_probs=69.5

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHH---H------HHHHHHHHhcCCCCceeceeEEEEEC-
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME---E------FKNEVTLIARLQHRNLVKLLGCCIQA-  541 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~---~------f~~E~~~l~~l~H~nlv~l~g~~~~~-  541 (579)
                      .++|...+.+|+|+||.||.... ++..+|+|.+.+......+   .      |.+|+..+.++.|+++..+..+.... 
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            46788889999999999998654 5678999999754322222   2      68999999999999999998875432 


Q ss_pred             -------CeEEEEEeccCCCCHHHHh
Q 008046          542 -------DESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       542 -------~~~~lV~Ey~~~GsL~~~l  560 (579)
                             ...+|||||+++.+|.++.
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhh
Confidence                   3578999999999998764

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.01  E-value=2.7e-05  Score=80.31  Aligned_cols=87  Identities=23%  Similarity=0.316  Sum_probs=68.0

Q ss_pred             ccccceecccCceeEEEEEecC---CcEEEEEEecCCC--cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC----CeE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE---GQEIAVKRLSKGS--GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA----DES  544 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~----~~~  544 (579)
                      |...+.||+|+||.||++....   +..+|+|++....  ....+.+.+|+.++.++ +|+||+++++.+...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            4556789999999999999643   6789999987432  22346788999999999 599999999976543    357


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++++||+. ++|.+++..
T Consensus        82 ~~~~e~~~-~~L~~~l~~   98 (332)
T cd07857          82 YLYEELME-ADLHQIIRS   98 (332)
T ss_pred             EEEEeccc-CCHHHHHhc
Confidence            88899885 689888853

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.99  E-value=7.6e-06  Score=85.83  Aligned_cols=88  Identities=27%  Similarity=0.360  Sum_probs=71.0

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCc--------ccHHHHHHHHHHHhcCC---CCceeceeEEEEEC
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG--------QGMEEFKNEVTLIARLQ---HRNLVKLLGCCIQA  541 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~---H~nlv~l~g~~~~~  541 (579)
                      +|+...++|+|+||.|..+.++. ..+|.||.+.+..-        ........|+.||..+.   |+||++++.+++.+
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            46777899999999999999865 56899999864311        11224568999999997   99999999999999


Q ss_pred             CeEEEEEecc-CCCCHHHHhc
Q 008046          542 DESMLIYEYM-PNKSLDFFIF  561 (579)
Q Consensus       542 ~~~~lV~Ey~-~~GsL~~~l~  561 (579)
                      ++.||++|-. ++-+|++||.
T Consensus       642 d~yyl~te~hg~gIDLFd~IE  662 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIE  662 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhh
Confidence            9999999954 4557888884

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.99  E-value=1.8e-05  Score=87.28  Aligned_cols=88  Identities=17%  Similarity=0.268  Sum_probs=66.8

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEE-ecCC-Cc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKR-LSKG-SG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~-l~~~-~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      ..+...+.||+|+||.||++.+.... +++|+ +... ..      ...+.+.+|++++..++|++++....++......
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            34456689999999999999875543 33333 2211 11      1235688999999999999999888888777788


Q ss_pred             EEEEeccCCCCHHHHhc
Q 008046          545 MLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~  561 (579)
                      ++||||+++++|.+++.
T Consensus       412 ~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        412 TIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             EEEEEecCCCcHHHHHH
Confidence            99999999999998874

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=97.95  E-value=1.9e-05  Score=62.58  Aligned_cols=72  Identities=38%  Similarity=0.756  Sum_probs=50.7

Q ss_pred             CccceeeeccCCCCcccccccccChHHHHHHhhc-CcceeeeecCcCccCCcceeecc-cccCCceeccCCCcceeee
Q 008046          328 DEFPKYVKLKLPDTSSSWFNASMNLKECSELCSK-NCSCTAYANSDVERGGSGCLLWF-GDLMDMKEYNDGGQDLYIR  403 (579)
Q Consensus       328 ~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~-nCsC~a~~~~~~~~~~~~C~~~~-~~l~~~~~~~~~~~~~ylr  403 (579)
                      ..|..+.++.+++..... ....++++|++.|++ +|.|.++.|..   ++.+|.+|. +++.+.......+.++|.+
T Consensus         4 ~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~~~~~~~~~y~~   77 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARLFPSGGVDLYEK   77 (78)
T ss_pred             ceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccceecccCCceeEEe
Confidence            457788888888554332 345799999999999 99999999964   355899998 6666655333444444443

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.94  E-value=3.2e-06  Score=82.62  Aligned_cols=90  Identities=23%  Similarity=0.280  Sum_probs=74.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|.||+|...+-+. ++..|+|.+++..   ......-+.|-+++...+||-|..|.-.+...+.++.||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            456666899999999999887544 8899999998652   233445678999999999999998877777788999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||..+|.|.-+|..
T Consensus       248 eyanGGeLf~HLsr  261 (516)
T KOG0690|consen  248 EYANGGELFFHLSR  261 (516)
T ss_pred             EEccCceEeeehhh
Confidence            99999999887753

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=97.94  E-value=5.2e-06  Score=79.45  Aligned_cols=88  Identities=22%  Similarity=0.349  Sum_probs=72.5

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC----cc----cHHHHHHHHHHHhcC-CCCceeceeEEEEECCe
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS----GQ----GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE  543 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~----~~----~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~  543 (579)
                      .+...+.||+|....|.+..++. |.+.|+|++....    .+    -.++-.+|+.+++++ .||+|+.|...+..+..
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF   97 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF   97 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence            45566789999999988887654 7889999986431    11    124557899999998 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhc
Q 008046          544 SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~  561 (579)
                      .++|+|.|+.|.|.++|.
T Consensus        98 ~FlVFdl~prGELFDyLt  115 (411)
T KOG0599|consen   98 VFLVFDLMPRGELFDYLT  115 (411)
T ss_pred             hhhhhhhcccchHHHHhh
Confidence            999999999999999996

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.91  E-value=4.2e-05  Score=72.22  Aligned_cols=78  Identities=17%  Similarity=0.216  Sum_probs=57.5

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcc--c------------------------HHHHHHHHHHHhcCCCCcee
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ--G------------------------MEEFKNEVTLIARLQHRNLV  532 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~--~------------------------~~~f~~E~~~l~~l~H~nlv  532 (579)
                      ..||+|+||.||++...+|+.||||.++.....  .                        ...+..|...+.++.|+++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP   82 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999878999999998754211  0                        11235788999999998875


Q ss_pred             ceeEEEEECCeEEEEEeccCCCCHHH
Q 008046          533 KLLGCCIQADESMLIYEYMPNKSLDF  558 (579)
Q Consensus       533 ~l~g~~~~~~~~~lV~Ey~~~GsL~~  558 (579)
                      ....+...  +.+|||||++++++..
T Consensus        83 ~p~~~~~~--~~~lVmE~~~g~~~~~  106 (190)
T cd05145          83 VPEPILLK--KNVLVMEFIGDDGSPA  106 (190)
T ss_pred             CceEEEec--CCEEEEEEecCCCchh
Confidence            55444332  3489999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.91  E-value=6.4e-06  Score=87.36  Aligned_cols=88  Identities=26%  Similarity=0.379  Sum_probs=69.1

Q ss_pred             ccceecccCceeEEEEEecC-CcEEEEEEe--cCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC--eEEEEEe
Q 008046          477 SYNKLGEGGFGPVYKGTLVE-GQEIAVKRL--SKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--ESMLIYE  549 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l--~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--~~~lV~E  549 (579)
                      ...+||+|+|-+||||.... |-+||=-.+  .+.  .+...+.|..|+.+++.|+|+|||+++..+....  ..-+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            34689999999999998643 666662222  211  3445678999999999999999999999887654  4778999


Q ss_pred             ccCCCCHHHHhcCCC
Q 008046          550 YMPNKSLDFFIFDID  564 (579)
Q Consensus       550 y~~~GsL~~~l~~~~  564 (579)
                      .|..|+|..|+...+
T Consensus       124 L~TSGtLr~Y~kk~~  138 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHR  138 (632)
T ss_pred             cccCCcHHHHHHHhc
Confidence            999999999997543

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=97.90  E-value=4.6e-06  Score=84.60  Aligned_cols=88  Identities=28%  Similarity=0.407  Sum_probs=69.4

Q ss_pred             ccccceecccCceeEEEEE-ecCCcEEEEEEecCCC--c-c----cHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEE
Q 008046          475 FASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGS--G-Q----GMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESM  545 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~~--~-~----~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~  545 (579)
                      |-..+.||+|+|..|||+. +...+.||||.-....  . +    ..+.-.+|-+|-..++||.||+++.++.- .+..+
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC  544 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC  544 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence            4445689999999999997 4557889999754221  1 1    12346789999999999999999998754 56688


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      -|+||+++.+|+.||..
T Consensus       545 TVLEYceGNDLDFYLKQ  561 (775)
T KOG1151|consen  545 TVLEYCEGNDLDFYLKQ  561 (775)
T ss_pred             eeeeecCCCchhHHHHh
Confidence            99999999999999965

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.90  E-value=1.3e-05  Score=84.80  Aligned_cols=99  Identities=20%  Similarity=0.342  Sum_probs=80.0

Q ss_pred             cCHHHHHHhcc---cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceecee
Q 008046          463 FDFASIAKATD---NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLL  535 (579)
Q Consensus       463 ~~~~~l~~at~---~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~  535 (579)
                      -.|..|+++..   -|..++.||-|+||.|..+.-.+ ...+|.|.|++..   ........+|-.||...+.+.||+|+
T Consensus       616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy  695 (1034)
T KOG0608|consen  616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY  695 (1034)
T ss_pred             hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence            34556666643   38888899999999999887433 5678999987542   23345678899999999999999999


Q ss_pred             EEEEECCeEEEEEeccCCCCHHHHhc
Q 008046          536 GCCIQADESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       536 g~~~~~~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      --+...+.+|.||||+++|++..+|.
T Consensus       696 ySFQDkdnLYFVMdYIPGGDmMSLLI  721 (1034)
T KOG0608|consen  696 YSFQDKDNLYFVMDYIPGGDMMSLLI  721 (1034)
T ss_pred             EEeccCCceEEEEeccCCccHHHHHH
Confidence            88888899999999999999999885

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.86  E-value=1.5e-05  Score=83.40  Aligned_cols=87  Identities=20%  Similarity=0.363  Sum_probs=75.4

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEecc
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      |...++||+||-..|||+...+.+.+|+|++...  ..+....|++|+..|.++ .|.+||+|+.|-.....+|+||||=
T Consensus       363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G  442 (677)
T KOG0596|consen  363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG  442 (677)
T ss_pred             hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc
Confidence            5566799999999999999888888999887533  455678999999999999 5999999999999999999999977


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                       .-+|...|..
T Consensus       443 -d~DL~kiL~k  452 (677)
T KOG0596|consen  443 -DIDLNKILKK  452 (677)
T ss_pred             -cccHHHHHHh
Confidence             4689999965

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.85  E-value=4e-05  Score=74.89  Aligned_cols=74  Identities=23%  Similarity=0.153  Sum_probs=61.3

Q ss_pred             cCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          484 GGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       484 G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      |.||.||++... +++.+|+|++....     .+..|...+....|||++++++++...+..++|+||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            889999999865 47899999987532     344555556666799999999999999999999999999999998854

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.75  E-value=7.9e-05  Score=70.80  Aligned_cols=83  Identities=18%  Similarity=0.167  Sum_probs=60.6

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcc----------------------cHHHHHHHHHHHhcCCCC--
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ----------------------GMEEFKNEVTLIARLQHR--  529 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~----------------------~~~~f~~E~~~l~~l~H~--  529 (579)
                      .+...+.||+|+||.||++...+|+.||||+++.....                      ....+..|..++.++.|+  
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            35556789999999999999888999999987642210                      012356788888888777  


Q ss_pred             ceeceeEEEEECCeEEEEEeccCCCCHHHHh
Q 008046          530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       530 nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l  560 (579)
                      .+++.++    ....++||||+++++|...+
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhcc
Confidence            4444443    23458999999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.71  E-value=1.3e-05  Score=81.87  Aligned_cols=92  Identities=27%  Similarity=0.428  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...++||+|+||.|+-.+... |...|.|++.+.   ..++..--++|-.++.+++.+-||.|--.+...+.+++|+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            457888899999999999888654 888898888643   2244556789999999999999999988888899999999


Q ss_pred             eccCCCCHHHHhcCCC
Q 008046          549 EYMPNKSLDFFIFDID  564 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~  564 (579)
                      ..|.+|+|.-+|.+..
T Consensus       265 tlMNGGDLkfHiyn~g  280 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHG  280 (591)
T ss_pred             EeecCCceeEEeeccC
Confidence            9999999998887543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.68  E-value=1.2e-05  Score=75.17  Aligned_cols=84  Identities=24%  Similarity=0.516  Sum_probs=69.1

Q ss_pred             ccccccceecccCceeEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEECC--eEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQAD--ESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~--~~~lV~  548 (579)
                      ++|...+++|+|.+..||.|. ..+.+.+.||.+++.   ..+...+|+.++..+. ||||++|+.....+.  ...||+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            466777899999999999998 455778999999854   3467899999999996 999999999887643  468999


Q ss_pred             eccCCCCHHHH
Q 008046          549 EYMPNKSLDFF  559 (579)
Q Consensus       549 Ey~~~GsL~~~  559 (579)
                      ||+.|-+...+
T Consensus       115 E~v~n~Dfk~l  125 (338)
T KOG0668|consen  115 EYVNNTDFKQL  125 (338)
T ss_pred             hhhccccHHHH
Confidence            99998875543

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=97.64  E-value=0.00086  Score=57.52  Aligned_cols=99  Identities=23%  Similarity=0.403  Sum_probs=65.1

Q ss_pred             CEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEe-cCCCCCCCCcceEEEecCC-eEEEcCCCcEEEeecCCC
Q 008046           31 ETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVA-NRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSI  108 (579)
Q Consensus        31 ~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~A-nr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~  108 (579)
                      +.+.+.+|.+.|-|-..++     |.| |..  ..+++|.. +...+.. ....+.|.++| |||+|..+.++|++..  
T Consensus        12 ~p~~~~s~~~~L~l~~dGn-----Lvl-~~~--~~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf~--   80 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGN-----LVL-YDS--NGSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSFD--   80 (114)
T ss_dssp             EEEEECETTEEEEEETTSE-----EEE-EET--TTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTT--
T ss_pred             cccccccccccceECCCCe-----EEE-EcC--CCCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeecC--
Confidence            4565655889988877664     333 332  35779999 4343332 34789999999 9999999999999943  


Q ss_pred             CCCCcEEEEec--CCCEEEEcCCCCceeeeeccCCC
Q 008046          109 TMKNPVVQLMD--SGNLVLTDGNYNSLLWQSFDHPC  142 (579)
Q Consensus       109 ~~~~~~a~lld--sGNlVL~~~~~~~~lWQSFd~PT  142 (579)
                      ....+.+..++  .||++ ... ...+.|.|=+.|.
T Consensus        81 ~ptdt~L~~q~l~~~~~~-~~~-~~~~sw~s~~dps  114 (114)
T PF01453_consen   81 YPTDTLLPGQKLGDGNVT-GKN-DSLTSWSSNTDPS  114 (114)
T ss_dssp             SSS-EEEEEET--TSEEE-EES-TSSEEEESS----
T ss_pred             CCccEEEeccCcccCCCc-ccc-ceEEeECCCCCCC
Confidence            23566677777  88888 542 3468999877774

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.62  E-value=2.3e-05  Score=76.98  Aligned_cols=90  Identities=20%  Similarity=0.328  Sum_probs=74.6

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|....+||+|+|.+|..+.+.. .+..|+|++++.   ..++......|-.++.+. +||-+|.|..++.....++.|
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            567777899999999999998765 788999998754   234455677888888776 799999999999888899999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      .||+++|+|..++..
T Consensus       330 ieyv~ggdlmfhmqr  344 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQR  344 (593)
T ss_pred             EEEecCcceeeehhh
Confidence            999999999776654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.53  E-value=0.00014  Score=68.86  Aligned_cols=92  Identities=21%  Similarity=0.330  Sum_probs=71.4

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCC-CceeceeEEEEECCe
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH-RNLVKLLGCCIQADE  543 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~nlv~l~g~~~~~~~  543 (579)
                      +++..+ ..|...++||.|+||.+|.|.. .+|..||||.=...  .....+.-|..+.+.++| ..+.++.-+..+..+
T Consensus         9 ~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y   85 (341)
T KOG1163|consen    9 EELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY   85 (341)
T ss_pred             hhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence            343333 5677889999999999999984 56999999985432  223467889998888865 567777778888889


Q ss_pred             EEEEEeccCCCCHHHHhc
Q 008046          544 SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~  561 (579)
                      -.+|||.+ +.||+++..
T Consensus        86 nvlVMdLL-GPsLEdLfn  102 (341)
T KOG1163|consen   86 NVLVMDLL-GPSLEDLFN  102 (341)
T ss_pred             ceeeeecc-CccHHHHHH
Confidence            99999988 889998764

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.51  E-value=0.00016  Score=79.88  Aligned_cols=89  Identities=27%  Similarity=0.405  Sum_probs=58.4

Q ss_pred             hcccccccceecccCceeEEEEEecC-----CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEE------EE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-----GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC------CI  539 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-----g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~------~~  539 (579)
                      ..++|...++||+|+||.||+|.+.+     +..||+|++.....  .+.+..|.  +....+.+++.+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            45678888999999999999999754     57899999864321  12222221  111122222221111      24


Q ss_pred             ECCeEEEEEeccCCCCHHHHhcCC
Q 008046          540 QADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       540 ~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ...+.+||+||+++++|.+++...
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhc
Confidence            566789999999999999998753

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.47  E-value=2.7e-05  Score=78.53  Aligned_cols=89  Identities=26%  Similarity=0.329  Sum_probs=69.7

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +|.-..+||+|+||+|..+.-+. .+..|||.|++..   ..+.+--+.|-++++-. +-|-|++|..++...+.++.||
T Consensus       350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM  429 (683)
T KOG0696|consen  350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM  429 (683)
T ss_pred             ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence            45556799999999999988644 5679999998652   12333446677777665 5788999999998899999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+.+|+|.-.|.+
T Consensus       430 EyvnGGDLMyhiQQ  443 (683)
T KOG0696|consen  430 EYVNGGDLMYHIQQ  443 (683)
T ss_pred             EEecCchhhhHHHH
Confidence            99999999887753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.45  E-value=0.00022  Score=63.51  Aligned_cols=77  Identities=19%  Similarity=0.198  Sum_probs=63.8

Q ss_pred             cceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCC--CceeceeEEEEECCeEEEEEeccCCCC
Q 008046          478 YNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH--RNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      .+.||+|.++.||++.... ..+++|.......  ...+..|+.++..++|  .++++++++....+..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            3579999999999999754 7899998865432  5679999999999976  588898888877778999999999887


Q ss_pred             HH
Q 008046          556 LD  557 (579)
Q Consensus       556 L~  557 (579)
                      +.
T Consensus        80 ~~   81 (155)
T cd05120          80 LD   81 (155)
T ss_pred             cc
Confidence            75

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.44  E-value=0.00012  Score=74.38  Aligned_cols=93  Identities=26%  Similarity=0.473  Sum_probs=77.1

Q ss_pred             HHHhcccccccceecccCceeEEEEEec----CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      +....+.|...++||+|.|++||++.+.    ..+.||+|.+...  .......+|++.|..+ .+.|++++.++....+
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            3344456778899999999999999853    3678999999754  2345688999999998 5899999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ...+|+||+++-.-.+++++
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             eeEEEecccCccCHHHHHhc
Confidence            99999999999888888764

>smart00090 RIO RIO-like kinase

Probab=97.37  E-value=0.0004  Score=67.97  Aligned_cols=83  Identities=20%  Similarity=0.134  Sum_probs=59.3

Q ss_pred             cccccceecccCceeEEEEE--ecCCcEEEEEEecCCCcc------------------------cHHHHHHHHHHHhcCC
Q 008046          474 NFASYNKLGEGGFGPVYKGT--LVEGQEIAVKRLSKGSGQ------------------------GMEEFKNEVTLIARLQ  527 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~--~~~g~~vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~l~  527 (579)
                      .|...+.||+|+||.||++.  ..+|+.||+|.++.....                        ....+..|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35666899999999999998  567999999998743210                        0123568999999987


Q ss_pred             CC--ceeceeEEEEECCeEEEEEeccCCCCHHHHh
Q 008046          528 HR--NLVKLLGCCIQADESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       528 H~--nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l  560 (579)
                      |.  .+.+++..    ...++||||+++++|...+
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccc
Confidence            53  33344432    2357999999998887654

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.31  E-value=0.00019  Score=78.70  Aligned_cols=83  Identities=28%  Similarity=0.384  Sum_probs=67.0

Q ss_pred             ccccceecccCcee-EEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccC
Q 008046          475 FASYNKLGEGGFGP-VYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       475 f~~~~~lG~G~fG~-V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      |...+.+|.|+-|+ ||+|.+ +|+.||||++-..   ...--.+|+..+..- .||||||.++.-..+..+||..|.| 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            55556788998876 799998 5789999998532   223456899988887 6999999988777788899999999 


Q ss_pred             CCCHHHHhcC
Q 008046          553 NKSLDFFIFD  562 (579)
Q Consensus       553 ~GsL~~~l~~  562 (579)
                      .-+|.+++..
T Consensus       586 ~~sL~dlie~  595 (903)
T KOG1027|consen  586 ACSLQDLIES  595 (903)
T ss_pred             hhhHHHHHhc
Confidence            5799999975

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.31  E-value=0.00031  Score=75.08  Aligned_cols=83  Identities=22%  Similarity=0.297  Sum_probs=55.8

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcccH----------------------------------------HHHHH
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGM----------------------------------------EEFKN  518 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~----------------------------------------~~f~~  518 (579)
                      +.||.|++|+||+|++.+|+.||||+.++......                                        -+|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            57999999999999999999999999875421110                                        02445


Q ss_pred             HHHHHhcC----CCCceeceeEEE-EECCeEEEEEeccCCCCHHHHhc
Q 008046          519 EVTLIARL----QHRNLVKLLGCC-IQADESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       519 E~~~l~~l----~H~nlv~l~g~~-~~~~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      |++.+.++    +|.+-+.+-..+ ......+|||||+++++|.+++.
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA  250 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence            66555544    233223332222 22445789999999999988764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.30  E-value=6.7e-06  Score=77.89  Aligned_cols=86  Identities=22%  Similarity=0.425  Sum_probs=65.6

Q ss_pred             ccceecccCceeEEEEEecC-CcEEEEEEecC-C-CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC--------CeEE
Q 008046          477 SYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSK-G-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--------DESM  545 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~-~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--------~~~~  545 (579)
                      ...++|+|.||.||++...+ ++.||+|++-- . ...-...-++|+.++..++|+|++.++..|...        ...+
T Consensus        21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y  100 (376)
T KOG0669|consen   21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY  100 (376)
T ss_pred             HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence            33589999999999999765 67788876532 1 122234567999999999999999999888642        2479


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|++++++ +|.-+|.+.
T Consensus       101 lVf~~ceh-DLaGlLsn~  117 (376)
T KOG0669|consen  101 LVFDFCEH-DLAGLLSNR  117 (376)
T ss_pred             eeHHHhhh-hHHHHhcCc
Confidence            99999986 788877653

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.20  E-value=0.00025  Score=65.70  Aligned_cols=93  Identities=25%  Similarity=0.392  Sum_probs=72.6

Q ss_pred             HHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhc-CCCCceeceeEEEEECCeE
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIAR-LQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~-l~H~nlv~l~g~~~~~~~~  544 (579)
                      ++.+.+.......||+|++|.|-|-++. +|...|+|+++.. ..+..+..++|+.+..+ ...|..|+++|........
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            4444455555678999999999988864 5899999999855 34556688999987555 5799999999988888889


Q ss_pred             EEEEeccCCCCHHHHhc
Q 008046          545 MLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~  561 (579)
                      +|.||.|. -||+.|-.
T Consensus       121 wIcME~M~-tSldkfy~  136 (282)
T KOG0984|consen  121 WICMELMD-TSLDKFYR  136 (282)
T ss_pred             EEeHHHhh-hhHHHHHH
Confidence            99999995 57776643

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.20  E-value=7.7e-05  Score=71.47  Aligned_cols=84  Identities=26%  Similarity=0.470  Sum_probs=68.6

Q ss_pred             eecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCCHH
Q 008046          480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      +|.+...|..|+|+.. |..+.+|.+...  +..-.++|..|...++-..||||+.++|.|..+..+.+|..||+.|||.
T Consensus       197 kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly  275 (448)
T KOG0195|consen  197 KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY  275 (448)
T ss_pred             hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence            6777888899999984 445666666532  3333468999988898899999999999999999999999999999999


Q ss_pred             HHhcCCC
Q 008046          558 FFIFDID  564 (579)
Q Consensus       558 ~~l~~~~  564 (579)
                      ..|++.+
T Consensus       276 nvlhe~t  282 (448)
T KOG0195|consen  276 NVLHEQT  282 (448)
T ss_pred             HHHhcCc
Confidence            9998654

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.05  E-value=0.0028  Score=64.11  Aligned_cols=88  Identities=16%  Similarity=0.189  Sum_probs=56.3

Q ss_pred             ccccccceecccCceeEEEEEecCC----cEEEEEEecCCCcccH-----------HHHHHHHHHHhcCCCCceeceeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEG----QEIAVKRLSKGSGQGM-----------EEFKNEVTLIARLQHRNLVKLLGC  537 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g----~~vAvK~l~~~~~~~~-----------~~f~~E~~~l~~l~H~nlv~l~g~  537 (579)
                      +.|...+.||+|+||.||++...+.    ..+|+|..........           .....+...+..++|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            4677778999999999999996543    4566665432211110           112233345567789999999997


Q ss_pred             EEECC----eEEEEEeccCCCCHHHHhc
Q 008046          538 CIQAD----ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       538 ~~~~~----~~~lV~Ey~~~GsL~~~l~  561 (579)
                      +....    ..++++|++. .++.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~  118 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFK  118 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHH
Confidence            76543    4577888764 35555543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.03  E-value=0.00024  Score=69.30  Aligned_cols=87  Identities=22%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             cccccc-cceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhc-CCCCceeceeEEEEE----CCeE
Q 008046          472 TDNFAS-YNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIAR-LQHRNLVKLLGCCIQ----ADES  544 (579)
Q Consensus       472 t~~f~~-~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~nlv~l~g~~~~----~~~~  544 (579)
                      |++|+. .++||-|--|+|.....+. ++..|+|+|.+.     ..-++|+++--. -.|+|||+++.++..    ..-+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            344432 2579999999999988765 788999998753     234677775443 379999999988754    3457


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|||+|++|.|.+.+.+.
T Consensus       135 LiVmE~meGGeLfsriq~~  153 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDR  153 (400)
T ss_pred             EeeeecccchHHHHHHHHc
Confidence            8999999999999998653

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.02  E-value=0.0025  Score=60.52  Aligned_cols=78  Identities=15%  Similarity=0.086  Sum_probs=58.5

Q ss_pred             cceecccCceeEEEEEecCCcEEEEEEecCCCcc----cHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEeccC
Q 008046          478 YNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ----GMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~----~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ...|++|+||.|+...- .+..++.+.+......    ...-|.+|+++|.+++ |+++++++++    +..+++|||++
T Consensus         7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            46899999999996554 5677777777643221    1125789999999995 5889998886    44689999999


Q ss_pred             CCCHHHHh
Q 008046          553 NKSLDFFI  560 (579)
Q Consensus       553 ~GsL~~~l  560 (579)
                      +.+|.+.+
T Consensus        82 G~~L~~~~   89 (218)
T PRK12274         82 GAAMYQRP   89 (218)
T ss_pred             CccHHhhh
Confidence            98887544

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.96  E-value=0.0017  Score=60.82  Aligned_cols=73  Identities=21%  Similarity=0.354  Sum_probs=48.1

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcc--cHHHH----------------------HHHHHHHhcCCCCc--ee
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ--GMEEF----------------------KNEVTLIARLQHRN--LV  532 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~--~~~~f----------------------~~E~~~l~~l~H~n--lv  532 (579)
                      +.||+|+||.||++...+++.||||++......  ....+                      ..|...+.++.+..  +.
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~   82 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP   82 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence            579999999999999878999999998753211  11111                      24555555554332  34


Q ss_pred             ceeEEEEECCeEEEEEeccCCCC
Q 008046          533 KLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       533 ~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      +++++    ...++|+||++++.
T Consensus        83 ~~~~~----~~~~lv~e~~~g~~  101 (187)
T cd05119          83 KPIDL----NRHVLVMEFIGGDG  101 (187)
T ss_pred             ceEec----CCCEEEEEEeCCCC
Confidence            44432    34589999999854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.81  E-value=0.0028  Score=69.04  Aligned_cols=85  Identities=16%  Similarity=0.210  Sum_probs=56.2

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCccc----------------------------------H-----
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQG----------------------------------M-----  513 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~----------------------------------~-----  513 (579)
                      .|.. +.||+|++|+||++++++ |+.||||++++...+.                                  .     
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4555 689999999999999987 9999999997542100                                  0     


Q ss_pred             -HHHHHHHHHHhcCC----CCceeceeEEEEE-CCeEEEEEeccCCCCHHHH
Q 008046          514 -EEFKNEVTLIARLQ----HRNLVKLLGCCIQ-ADESMLIYEYMPNKSLDFF  559 (579)
Q Consensus       514 -~~f~~E~~~l~~l~----H~nlv~l~g~~~~-~~~~~lV~Ey~~~GsL~~~  559 (579)
                       -+|.+|+..+.+++    +.+.+.+-....+ .....|||||++++.|.++
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence             12445555444442    3333333332222 4567899999999999774

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.78  E-value=0.0027  Score=65.29  Aligned_cols=89  Identities=26%  Similarity=0.332  Sum_probs=67.1

Q ss_pred             cccccceecccCceeEEEEEecCC--cEEEEEEecCCCcccHHHHHHHHHHHhcCCC----CceeceeEEE-EECCeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEG--QEIAVKRLSKGSGQGMEEFKNEVTLIARLQH----RNLVKLLGCC-IQADESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g--~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H----~nlv~l~g~~-~~~~~~~l  546 (579)
                      .|...++||+|+||.||++.....  ..+|+|............+..|+.++..+.+    +++.+++..- ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            678888999999999999996553  4788887764433222378889998888863    5777777776 36678899


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      ||+.+ +.+|.++....
T Consensus        99 VM~l~-G~sL~dl~~~~  114 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRN  114 (322)
T ss_pred             EEecc-CccHHHHHHhC
Confidence            99977 88999977543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.76  E-value=0.0035  Score=65.18  Aligned_cols=90  Identities=19%  Similarity=0.285  Sum_probs=69.9

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCC-----C---CceeceeEEEEE---
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-----H---RNLVKLLGCCIQ---  540 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~nlv~l~g~~~~---  540 (579)
                      .+|...++||=|.|.+||.+.... .+.||+|+.+.. +.-.+.-+.|++++.+++     |   ..||+|+..+..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            456677899999999999998544 678999998743 344567789999998873     2   479999998865   


Q ss_pred             -CCeEEEEEeccCCCCHHHHhcCCC
Q 008046          541 -ADESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       541 -~~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                       +.+.++|+|++ +-+|..+|....
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~  180 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSN  180 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhC
Confidence             45899999999 567888776433

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.71  E-value=0.01  Score=59.54  Aligned_cols=85  Identities=33%  Similarity=0.481  Sum_probs=70.7

Q ss_pred             cccceecccCceeEEEEEecCCcEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCC-ceeceeEEEEECCeEEEEEecc
Q 008046          476 ASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ---GMEEFKNEVTLIARLQHR-NLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~-nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .....||.|+||.||++...  ..+++|.+......   ....|.+|+.++..+.|+ +++++..........++++||+
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           3 RILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             eeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            34468999999999999976  78899998754322   367899999999999888 7999999987777789999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      .+++|.+++..
T Consensus        81 ~~~~l~~~~~~   91 (384)
T COG0515          81 DGGSLEDLLKK   91 (384)
T ss_pred             CCCcHHHHHHh
Confidence            99999977654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.56  E-value=0.0015  Score=63.08  Aligned_cols=89  Identities=19%  Similarity=0.326  Sum_probs=68.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEE-EEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGC-CIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~-~~~~~~~~lV~E  549 (579)
                      +.|...+.||+|.||.+..+.++. .+.+++|.++.. ....++|.+|..---.+ .|.||+.-+.. +...+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            345566789999999999999865 667889988643 34567999998754455 58999877654 444567778999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+|.|+|.+-+..
T Consensus       103 ~aP~gdL~snv~~  115 (378)
T KOG1345|consen  103 FAPRGDLRSNVEA  115 (378)
T ss_pred             cCccchhhhhcCc
Confidence            9999999887653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.55  E-value=0.0036  Score=62.15  Aligned_cols=85  Identities=19%  Similarity=0.349  Sum_probs=64.4

Q ss_pred             ccccccceecccCceeEEEEE-ecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      -+|...++||+|.||.++.|+ +-+++.||||.=...+  ..-++..|-+..+.| ..+.|...+-+-.++.+-.||+|.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            367788999999999999998 4568999999754322  223456666665555 457888877777778888999998


Q ss_pred             cCCCCHHHHh
Q 008046          551 MPNKSLDFFI  560 (579)
Q Consensus       551 ~~~GsL~~~l  560 (579)
                      + +.||+++.
T Consensus       106 L-GPSLEDLF  114 (449)
T KOG1165|consen  106 L-GPSLEDLF  114 (449)
T ss_pred             h-CcCHHHHH
Confidence            8 88999875

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=96.54  E-value=0.0017  Score=65.54  Aligned_cols=90  Identities=19%  Similarity=0.235  Sum_probs=69.8

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCC------ceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHR------NLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~------nlv~l~g~~~~~~~~  544 (579)
                      ++.|.....+|+|.||.|-+..... +..||||.++.. ....+.-+.|++++.++.+.      -.|.+..++.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            4567777899999999999887433 788999999754 33445678899999998321      356777777788999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +||+|.| +-|+.+||...
T Consensus       167 Civfell-G~S~~dFlk~N  184 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKEN  184 (415)
T ss_pred             EEEEecc-ChhHHHHhccC
Confidence            9999988 66999999753

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=96.45  E-value=0.0016  Score=62.89  Aligned_cols=81  Identities=20%  Similarity=0.374  Sum_probs=65.7

Q ss_pred             ceecccCceeEEEEEecC-CcEEEEEEecCC-CcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      ..||.|.-|.|+|..+.. |..+|||.+... ..+..+..++.+.++.+.+ .|.||+.+|++..+....+-||.|. -.
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C  176 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TC  176 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HH
Confidence            479999999999999765 889999999765 3455678888998887775 8999999999999998888899883 23


Q ss_pred             HHHHh
Q 008046          556 LDFFI  560 (579)
Q Consensus       556 L~~~l  560 (579)
                      ++.+|
T Consensus       177 ~ekLl  181 (391)
T KOG0983|consen  177 AEKLL  181 (391)
T ss_pred             HHHHH
Confidence            44444

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.35  E-value=0.0019  Score=73.88  Aligned_cols=90  Identities=24%  Similarity=0.386  Sum_probs=63.6

Q ss_pred             HHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC---CCceeceeEEEEECCeEE
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ---HRNLVKLLGCCIQADESM  545 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~nlv~l~g~~~~~~~~~  545 (579)
                      +.....|...++||+|+||+||+|...+|+.||+|.-++....   +|-.-.+++.+|+   -+-+..+..+..-.+.-+
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            3344567778899999999999999888999999987655432   3333334444444   122333333334466678


Q ss_pred             EEEeccCCCCHHHHhc
Q 008046          546 LIYEYMPNKSLDFFIF  561 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~  561 (579)
                      ||+||.+-|+|.+++.
T Consensus       771 lv~ey~~~Gtlld~~N  786 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLIN  786 (974)
T ss_pred             eeeeccccccHHHhhc
Confidence            9999999999999996

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.12  E-value=0.006  Score=47.68  Aligned_cols=48  Identities=15%  Similarity=0.341  Sum_probs=34.0

Q ss_pred             eeccCCCCcccccccccChHHHHHHhhcCcceeeeecCcCccCCcceeeccc
Q 008046          334 VKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWFG  385 (579)
Q Consensus       334 ~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~  385 (579)
                      .+++++..+..... ..+.++|+++|+.+|.|.+|.|..   ....|+++..
T Consensus        10 ~~~~~~g~d~~~~~-~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~   57 (73)
T cd01100          10 SNVDFRGGDLSTVF-ASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSS   57 (73)
T ss_pred             CCCccccCCcceee-cCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccC
Confidence            35555554443222 458999999999999999999963   2457988654

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.93  E-value=0.0006  Score=65.52  Aligned_cols=86  Identities=23%  Similarity=0.366  Sum_probs=64.8

Q ss_pred             cccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECC-----eEEEE
Q 008046          476 ASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----ESMLI  547 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-----~~~lV  547 (579)
                      ...+.||=|+||.||..+.+ +|+.||.|++...-  -...+.+.+|+.++.-.+|.|++.++..-....     +.|+|
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            34468999999999998865 48899999986432  123567889999999999999998887654332     46778


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      .|.|. .+|.+.|-.
T Consensus       136 TELmQ-SDLHKIIVS  149 (449)
T KOG0664|consen  136 TELMQ-SDLHKIIVS  149 (449)
T ss_pred             HHHHH-hhhhheecc
Confidence            88884 577766643

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=95.89  E-value=0.029  Score=54.99  Aligned_cols=83  Identities=16%  Similarity=0.255  Sum_probs=59.8

Q ss_pred             ceec-ccCceeEEEEEecCCcEEEEEEecCCC-------------cccHHHHHHHHHHHhcCCCCce--eceeEEEEECC
Q 008046          479 NKLG-EGGFGPVYKGTLVEGQEIAVKRLSKGS-------------GQGMEEFKNEVTLIARLQHRNL--VKLLGCCIQAD  542 (579)
Q Consensus       479 ~~lG-~G~fG~V~kg~~~~g~~vAvK~l~~~~-------------~~~~~~f~~E~~~l~~l~H~nl--v~l~g~~~~~~  542 (579)
                      ..|| .|+.|+||+.... +..++||......             ......+.+|+.++..++|+++  ++++++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 8899999988874 6778888774210             1223467889999999988775  67777654432


Q ss_pred             ----eEEEEEeccCC-CCHHHHhcC
Q 008046          543 ----ESMLIYEYMPN-KSLDFFIFD  562 (579)
Q Consensus       543 ----~~~lV~Ey~~~-GsL~~~l~~  562 (579)
                          ..++|+||+++ .+|.+++.+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE  140 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc
Confidence                23599999997 689888754

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=95.83  E-value=0.0059  Score=65.59  Aligned_cols=87  Identities=26%  Similarity=0.310  Sum_probs=67.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.+.....+|+|+|+.|..+... .++..+||.+.+..    .+-..|+.++... +|+|++++.+.+..+.+.++|+|.
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~  397 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL  397 (612)
T ss_pred             hhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence            34444567999999999988864 47889999997542    2234566555554 799999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +.+|-|.+.++..
T Consensus       398 l~g~ell~ri~~~  410 (612)
T KOG0603|consen  398 LDGGELLRRIRSK  410 (612)
T ss_pred             ccccHHHHHHHhc
Confidence            9999988777643

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.79  E-value=0.013  Score=56.13  Aligned_cols=82  Identities=17%  Similarity=0.249  Sum_probs=61.9

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCC--CceeceeEEEEECC---eEEEEEeccC
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQH--RNLVKLLGCCIQAD---ESMLIYEYMP  552 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H--~nlv~l~g~~~~~~---~~~lV~Ey~~  552 (579)
                      +.|+.|..+.+|+....+|..+++|....... .....+..|++++..+.+  .++.+++.+.....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            47899999999999887668899998764322 134578999999999865  44567777765532   5689999999


Q ss_pred             CCCHHHHh
Q 008046          553 NKSLDFFI  560 (579)
Q Consensus       553 ~GsL~~~l  560 (579)
                      +.+|.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            88876654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=95.48  E-value=0.0015  Score=68.16  Aligned_cols=89  Identities=20%  Similarity=0.213  Sum_probs=72.1

Q ss_pred             ccccceecccCceeEEEEEecCCc-EEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQ-EIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~-~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.....||-|+||.|-........ ..|+|.+++.   .....+....|-.+|.+.+.+.||+|+--+....+.|++||-
T Consensus       422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa  501 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA  501 (732)
T ss_pred             hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence            344458999999999988875533 4788888644   233445678999999999999999999988889999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      |-+|.|...|.+.
T Consensus       502 ClGGElWTiLrdR  514 (732)
T KOG0614|consen  502 CLGGELWTILRDR  514 (732)
T ss_pred             hcCchhhhhhhhc
Confidence            9999999999753

>cd05151 ChoK Choline Kinase (ChoK)

Probab=94.54  E-value=0.068  Score=48.80  Aligned_cols=76  Identities=17%  Similarity=0.154  Sum_probs=54.2

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcee-ceeEEEEECCeEEEEEeccCCCCHH
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV-KLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv-~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      +.|+.|.++.||+.... +..+++|....... ....+..|+.++..+.+.+++ +++...  ....++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence            57899999999998864 67899998764321 223567888888888654443 455443  33457999999998876


Q ss_pred             H
Q 008046          558 F  558 (579)
Q Consensus       558 ~  558 (579)
                      .
T Consensus        80 ~   80 (170)
T cd05151          80 T   80 (170)
T ss_pred             c
Confidence            3

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=94.53  E-value=0.029  Score=59.06  Aligned_cols=88  Identities=17%  Similarity=0.256  Sum_probs=68.4

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC------CCceeceeEEEEECCeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ------HRNLVKLLGCCIQADESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~------H~nlv~l~g~~~~~~~~~l  546 (579)
                      .|......|+|-|+.|..+... .|..||||.|... +...+.=+.|+++|.+|.      --|.++|+-.+...++++|
T Consensus       433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl  511 (752)
T KOG0670|consen  433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL  511 (752)
T ss_pred             eeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence            4554456799999999999854 3889999999854 233345578999999985      2478899888889999999


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+|-+ .-+|.+.|..-
T Consensus       512 VFE~L-slNLRevLKKy  527 (752)
T KOG0670|consen  512 VFEPL-SLNLREVLKKY  527 (752)
T ss_pred             Eehhh-hchHHHHHHHh
Confidence            99977 46788888643

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=92.32  E-value=0.22  Score=54.17  Aligned_cols=85  Identities=16%  Similarity=0.282  Sum_probs=55.2

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCcccH------------------------------H----------
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGM------------------------------E----------  514 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~------------------------------~----------  514 (579)
                      |.. +.|+.++.|+||++++.+|+.||||+.++.-....                              +          
T Consensus       128 F~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~El  206 (517)
T COG0661         128 FEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREEL  206 (517)
T ss_pred             cCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHh
Confidence            443 57899999999999999999999999765321110                              1          


Q ss_pred             HHHHHHHHHhcC----CCCceeceeEEE-EECCeEEEEEeccCCCCHHHHh
Q 008046          515 EFKNEVTLIARL----QHRNLVKLLGCC-IQADESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       515 ~f~~E~~~l~~l----~H~nlv~l~g~~-~~~~~~~lV~Ey~~~GsL~~~l  560 (579)
                      ++.+|+.-+.++    ++..-+++-..+ .-.....|+|||++|-.+.++.
T Consensus       207 Dy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~  257 (517)
T COG0661         207 DYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA  257 (517)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH
Confidence            123454444443    222223333333 3356788999999998888774

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=91.83  E-value=0.074  Score=45.91  Aligned_cols=43  Identities=23%  Similarity=0.439  Sum_probs=33.2

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHh
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIA  524 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~  524 (579)
                      +.|+.|+.|+||+|++.+|+.||||..++...   +.+..++.+|.
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~---~~i~~Dl~~l~   59 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPGIE---EQIEADLRILR   59 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchHHH---HHHHHHHHHHH
Confidence            57999999999999999999999999875432   34444554443

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=91.30  E-value=0.082  Score=52.55  Aligned_cols=85  Identities=25%  Similarity=0.397  Sum_probs=59.3

Q ss_pred             ccccceecccCceeEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------eEE
Q 008046          475 FASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------ESM  545 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------~~~  545 (579)
                      |.....+|.|.= .|-.+.. -.++.||+|++...  .....+.-.+|..+|..+.|+|+++++.++....      +.|
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y   97 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY   97 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence            333445666654 3333321 23788999987532  2334556778999999999999999999886543      579


Q ss_pred             EEEeccCCCCHHHHhc
Q 008046          546 LIYEYMPNKSLDFFIF  561 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~  561 (579)
                      +|+||| ..+|.+.+.
T Consensus        98 ~v~e~m-~~nl~~vi~  112 (369)
T KOG0665|consen   98 LVMELM-DANLCQVIL  112 (369)
T ss_pred             HHHHhh-hhHHHHHHH
Confidence            999999 468888775

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=90.78  E-value=0.39  Score=52.15  Aligned_cols=30  Identities=23%  Similarity=0.440  Sum_probs=27.0

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCC
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKG  508 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~  508 (579)
                      +.|+.-+.|+||++++++|+.||||+.++.
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            578999999999999999999999997654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=89.10  E-value=1  Score=41.54  Aligned_cols=76  Identities=20%  Similarity=0.325  Sum_probs=54.7

Q ss_pred             ceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcee-ceeEEEEECCeEEEEEeccCCCCHH
Q 008046          479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV-KLLGCCIQADESMLIYEYMPNKSLD  557 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv-~l~g~~~~~~~~~lV~Ey~~~GsL~  557 (579)
                      +.|++|.++.||+|... +..+|+|.-...  .....+..|++++..+...++. +++.+-    .-.+.|||..+-.|.
T Consensus        28 ~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~~L~  100 (201)
T COG2112          28 KELAKGTTSVVYLGEWR-GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGRPLG  100 (201)
T ss_pred             hhhhcccccEEEEeecc-CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCcchh
Confidence            58999999999999874 458899887643  3356899999999888765554 333332    234559999887876


Q ss_pred             HHhc
Q 008046          558 FFIF  561 (579)
Q Consensus       558 ~~l~  561 (579)
                      +.-.
T Consensus       101 ~~~~  104 (201)
T COG2112         101 KLEI  104 (201)
T ss_pred             hhhh
Confidence            6543

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=86.62  E-value=0.2  Score=34.35  Aligned_cols=32  Identities=28%  Similarity=0.663  Sum_probs=25.1

Q ss_pred             CCCccc-cccCCCccccC-CCCCCCCCCCCCccC
Q 008046          276 DRCDLY-SVCGANARCTT-NSSRRCDCLEGFVPK  307 (579)
Q Consensus       276 ~~C~~~-~~CG~~g~C~~-~~~~~C~C~~Gf~~~  307 (579)
                      |+|... ..|..++.|.. .+.-.|.|++||...
T Consensus         3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~   36 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYELN   36 (42)
T ss_dssp             STTTTTSSSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred             cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence            568775 48999999965 356689999999843

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PRK10593 hypothetical protein; Provisional

Probab=84.72  E-value=3.1  Score=42.09  Aligned_cols=77  Identities=10%  Similarity=0.072  Sum_probs=55.7

Q ss_pred             ccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCC---CceeceeEEEEE---CCeEEEEEec
Q 008046          477 SYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH---RNLVKLLGCCIQ---ADESMLIYEY  550 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H---~nlv~l~g~~~~---~~~~~lV~Ey  550 (579)
                      ..+.||+|..+.||+-...+++ +.+|..+.  ......|.+|...++.+..   ..+.++++.|..   .+..+||||+
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            3457999999999998765553 55666432  1123588999999988743   467888888754   3558999999


Q ss_pred             cCCCCH
Q 008046          551 MPNKSL  556 (579)
Q Consensus       551 ~~~GsL  556 (579)
                      ++++++
T Consensus        95 i~G~~~  100 (297)
T PRK10593         95 LRGVSV  100 (297)
T ss_pred             cCCEec
Confidence            998765

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=83.71  E-value=0.8  Score=29.26  Aligned_cols=30  Identities=27%  Similarity=0.727  Sum_probs=22.3

Q ss_pred             CccccccCCCccccCC-CCCCCCCCCCCccC
Q 008046          278 CDLYSVCGANARCTTN-SSRRCDCLEGFVPK  307 (579)
Q Consensus       278 C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  307 (579)
                      |.....|..++.|... +...|.|++||...
T Consensus         2 C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           2 CAASNPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCCCCEEecCCCCeEeECCCCCccc
Confidence            4445678889999754 46789999999654

>smart00223 APPLE APPLE domain

Probab=83.22  E-value=1.5  Score=34.63  Aligned_cols=50  Identities=16%  Similarity=0.249  Sum_probs=34.1

Q ss_pred             eeccCCCCcccccccccChHHHHHHhhcCcceeeeecCcCccCCcceeecc
Q 008046          334 VKLKLPDTSSSWFNASMNLKECSELCSKNCSCTAYANSDVERGGSGCLLWF  384 (579)
Q Consensus       334 ~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~  384 (579)
                      .+++++..+.... ...+.++|+++|..+=.|.+|.|.........|+++.
T Consensus         7 ~~~df~G~Dl~~~-~~~~~~~Cq~~Ct~~~~C~~FTf~~~~~~~~~C~LK~   56 (79)
T smart00223        7 KNVDFRGSDINTV-YVPSAQVCQKRCTSHPRCLFFTFSTNEPPEEKCLLKD   56 (79)
T ss_pred             cCccccCceeeee-ecCCHHHHHHhhcCCCCccEEEeeCCCCCCCEeEeCc
Confidence            4455555554433 2468999999999999999999964322223787754

Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=81.40  E-value=3.2  Score=44.45  Aligned_cols=78  Identities=26%  Similarity=0.350  Sum_probs=55.9

Q ss_pred             eeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE----CCeEEEEEeccCC-CCHHHHh
Q 008046          487 GPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----ADESMLIYEYMPN-KSLDFFI  560 (579)
Q Consensus       487 G~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----~~~~~lV~Ey~~~-GsL~~~l  560 (579)
                      .+-||+.. .+|..+.+|+++....+.......-++..+++.|.|+|++..+...    +..+.+||+|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            35677774 3688899999964433333233445677899999999999987763    4568999999985 6688877


Q ss_pred             cCCC
Q 008046          561 FDID  564 (579)
Q Consensus       561 ~~~~  564 (579)
                      |...
T Consensus       370 F~~~  373 (655)
T KOG3741|consen  370 FANP  373 (655)
T ss_pred             ccCC
Confidence            7543

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=80.26  E-value=1.8  Score=38.41  Aligned_cols=28  Identities=18%  Similarity=0.064  Sum_probs=11.7

Q ss_pred             ccEEEEe-ehhHHHHHHHHhheeeEeeeh
Q 008046          414 KKQVGII-IASVLLMAMFIVASLFCIWRK  441 (579)
Q Consensus       414 ~~~i~~i-~~~~~~~~~~~~~~~~~~~rr  441 (579)
                      +.+++.+ +++.+.+++++++++|++++|
T Consensus        48 knIVIGvVVGVGg~ill~il~lvf~~c~r   76 (154)
T PF04478_consen   48 KNIVIGVVVGVGGPILLGILALVFIFCIR   76 (154)
T ss_pred             ccEEEEEEecccHHHHHHHHHhheeEEEe
Confidence            3444444 333333333444444444444

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	579
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		7e-18
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-17
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-13
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-13
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-13
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-12
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		8e-12
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-11
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		6e-09
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		4e-08
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-08
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-07
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-07
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-07
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-06
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-06
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-06
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-06
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		6e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		6e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-06
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-06
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		7e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-06
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-06
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		7e-06
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		9e-06
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		1e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-05
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-05
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		2e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		3e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-05
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		4e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-05
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-05
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-05
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		5e-05
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-05
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		5e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		5e-05
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		5e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		6e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		7e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		7e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		7e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		7e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		7e-05
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		8e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		8e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		8e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		8e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		8e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-05
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		8e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		8e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		8e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		8e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		8e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		8e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		9e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		9e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		9e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		9e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		3e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		6e-04
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		7e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		7e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		7e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		7e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		7e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		7e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		7e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		8e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		8e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		8e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		8e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		8e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		8e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		8e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		8e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		9e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		9e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		9e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		9e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME-EFK 517
           +L  F    +  A+DNF++ N LG GGFG VYKG L +G  +AVKRL +   QG E +F+
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 518 NEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            EV +I+   HRNL++L G C+   E +L+Y YM N S+
Sbjct: 84  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME-EFK 517
           +L  F    +  A+DNF + N LG GGFG VYKG L +G  +AVKRL +   QG E +F+
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 518 NEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            EV +I+   HRNL++L G C+   E +L+Y YM N S+
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 457 DMELWEFDFASIAKATDNFASY------NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG 510
           D     F F  +   T+NF         NK+GEGGFG VYKG  V    +AVK+L+    
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 511 QGMEE----FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              EE    F  E+ ++A+ QH NLV+LLG     D+  L+Y YMPN SL
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 457 DMELWEFDFASIAKATDNFASY------NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG 510
           D     F F  +   T+NF         NK+GEGGFG VYKG  V    +AVK+L+    
Sbjct: 3   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 511 QGMEE----FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              EE    F  E+ ++A+ QH NLV+LLG     D+  L+Y YMPN SL
Sbjct: 62  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 457 DMELWEFDFASIAKATDNFASY------NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG 510
           D     F F  +   T+NF         NK+GEGGFG VYKG  V    +AVK+L+    
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 511 QGMEE----FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              EE    F  E+ ++A+ QH NLV+LLG     D+  L+Y YMPN SL
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN 518
           E +      + +AT+NF     +G G FG VYKG L +G ++A+KR +  S QG+EEF+ 
Sbjct: 25  ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDID 564
           E+  ++  +H +LV L+G C + +E +LIY+YM N +L   ++  D
Sbjct: 85  EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN 518
           E +      + +AT+NF     +G G FG VYKG L +G ++A+KR +  S QG+EEF+ 
Sbjct: 25  ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDID 564
           E+  ++  +H +LV L+G C + +E +LIY+YM N +L   ++  D
Sbjct: 85  EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 463 FDFASIAKATDNFASY------NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEE- 515
           F F  +   T+NF         NK GEGGFG VYKG  V    +AVK+L+       EE 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 516 ---FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              F  E+ + A+ QH NLV+LLG     D+  L+Y Y PN SL
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 474 NFASYNKLGEGGFGPVYKG---TLVEGQE---IAVKRLSKGSGQGMEEFKNEVTLIARLQ 527
           N     +LGEG FG V+      L   Q+   +AVK L   S    ++F  E  L+  LQ
Sbjct: 14  NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           H ++VK  G C++ D  ++++EYM +  L+ F+
Sbjct: 74  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 479 NKLGEGGFGPVYKGTLV------EGQEIAVKRLS-KGSGQGMEEFKNEVTLIARLQHRNL 531
            +LGE  FG VYKG L       + Q +A+K L  K  G   EEF++E  L ARLQH N+
Sbjct: 32  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           V LLG   +     +I+ Y  +  L  F+
Sbjct: 92  VCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 479 NKLGEGGFGPVYKGTLV------EGQEIAVKRLS-KGSGQGMEEFKNEVTLIARLQHRNL 531
            +LGE  FG VYKG L       + Q +A+K L  K  G   EEF++E  L ARLQH N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           V LLG   +     +I+ Y  +  L  F+
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 480 KLGEGGFGPVYKG---TLVEGQE---IAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
           +LGEG FG V+      L+  Q+   +AVK L + S    ++F+ E  L+  LQH+++V+
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
             G C +    ++++EYM +  L+ F+
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFL 111

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 480 KLGEGGFGPVYKG---TLVEGQE---IAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
           +LGEG FG V+      L+  Q+   +AVK L + S    ++F+ E  L+  LQH+++V+
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
             G C +    ++++EYM +  L+ F+
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFL 105

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 480 KLGEGGFGPVYKG---TLVEGQE---IAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
           +LGEG FG V+      L+  Q+   +AVK L + S    ++F+ E  L+  LQH+++V+
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFI 560
             G C +    ++++EYM +  L+ F+
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 462 EFDFASIAKATDNFASYNK-LGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQG------- 512
           EF  + +    DN   Y K +G+GGFG V+KG LV+ + + A+K L  G  +G       
Sbjct: 7   EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP 552
            +EF+ EV +++ L H N+VKL G  +  +   ++ E++P
Sbjct: 67  FQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVP 104

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 462 EFDFASIAKATDNFASYNK-LGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQG------- 512
           EF  + +    DN   Y K +G+GGFG V+KG LV+ + + A+K L  G  +G       
Sbjct: 7   EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP 552
            +EF+ EV +++ L H N+VKL G  +  +   ++ E++P
Sbjct: 67  FQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVP 104

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 462 EFDFASIAKATDNFASYNK-LGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQG------- 512
           EF  + +    DN   Y K +G+GGFG V+KG LV+ + + A+K L  G  +G       
Sbjct: 7   EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP 552
            +EF+ EV +++ L H N+VKL G  +  +   ++ E++P
Sbjct: 67  FQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVP 104

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 466 ASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLS-KGSGQGMEEFK-NEVTL 522
           A  A + D +    KLGEG +G VYK    V  + +A+KR+  +   +G+      EV+L
Sbjct: 27  APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSL 86
Query: 523 IARLQHRNLVKLLGCCIQADESMLIYEYMPN 553
           +  LQHRN+++L           LI+EY  N
Sbjct: 87  LKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 456 EDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGME 514
           + M+ WE +   I          +KLG G +G VY G   +    +AVK L + + + +E
Sbjct: 22  QSMDKWEMERTDITMK-------HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VE 73
Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           EF  E  ++  ++H NLV+LLG C       ++ EYMP  +L
Sbjct: 74  EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 115

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 479 NKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
            +LGEG FG V+           +   +AVK L   +    ++F+ E  L+  LQH ++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
           K  G C   D  ++++EYM +  L+ F+
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQ 511
           HM  + + WE +   I          +KLG G +G VY+G   +    +AVK L + + +
Sbjct: 2   HMSPNYDKWEMERTDITMK-------HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 54
Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
            +EEF  E  ++  ++H NLV+LLG C +     +I E+M
Sbjct: 55  -VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 93

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQ 511
           HM  + + WE +   I          +KLG G +G VY+G   +    +AVK L + + +
Sbjct: 2   HMSPNYDKWEMERTDITMK-------HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 54
Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
            +EEF  E  ++  ++H NLV+LLG C +     +I E+M
Sbjct: 55  -VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 93

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 481 LGEGGFGPVYKGTLVEGQ-----EIAVKRLSKGSGQGME-EFKNEVTLIARLQHRNLVKL 534
           +G G FG VYKG L          +A+K L  G  +    +F  E  ++ +  H N+++L
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 535 LGCCIQADESMLIYEYMPNKSLDFFIFDID 564
            G   +    M+I EYM N +LD F+ + D
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKD 141

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 103

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 77  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 104

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 72  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 99

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 78  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 105

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 24  HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 83  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSL 131

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 79  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 106

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 80  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 107

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 103

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 100

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 100

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 100

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 71  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 98

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 74  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 101

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 91  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 118

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 479 NKLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 531 LVKLLGCCIQADES--MLIYEYMPNKSL 556
           +VK  G C  A      LI EY+P  SL
Sbjct: 91  IVKYKGVCYSAGRRNLKLIMEYLPYGSL 118

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G FG VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 17  HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 76  CTREPPFYIITEFM 89

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 481 LGEGGFGPVYKGTLV-EGQ----EIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG VYKG  V EG+     +A+K L++ +G +   EF +E  ++A + H +LV+L
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 535 LGCCIQADESMLIYEYMPNKSLDFFIFD 562
           LG C+ +    L+ + MP+  L  ++ +
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHE 132

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 481 LGEGGFGPVYKGTLV-EGQ----EIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKL 534
           LG G FG VYKG  V EG+     +A+K L++ +G +   EF +E  ++A + H +LV+L
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 535 LGCCIQADESMLIYEYMPNKSLDFFIFD 562
           LG C+ +    L+ + MP+  L  ++ +
Sbjct: 83  LGVCL-SPTIQLVTQLMPHGCLLEYVHE 109

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 24  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 83  CTREPPFYIIIEFM 96

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 285 CTREPPFYIITEFM 298

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 24  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 83  CTREPPFYIITEFM 96

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 457 DMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEF 516
           D + WE    SI           +LG G FG V+ G      ++AVK L  G+   ++ F
Sbjct: 4   DKDAWEIPRESIKLV-------KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAF 55
Query: 517 KNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS-LDFFIFD 562
             E  L+  LQH  LV+L     + +   +I EYM   S LDF   D
Sbjct: 56  LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSD 102

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 17  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 76  CTREPPFYIIIEFM 89

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 481 LGEGGFGPVYKGTLVE----GQ----EIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
           LG+G F  ++KG   E    GQ    E+ +K L K      E F    +++++L H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
              G C+  DE++L+ E++   SLD ++
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYL 103

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 24  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 83  CTREPPFYIITEFM 96

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 78  CTREPPFYIITEFM 91

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 23  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 82  CTREPPFYIITEFM 95

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 78  CTREPPFYIIIEFM 91

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 78  CTREPPFYIITEFM 91

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 20  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 79  CTREPPFYIIIEFM 92

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 78  TQ-EPIYIITEYMENGSLVDFL 98

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 24  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 83  CTREPPFYIITEFM 96

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 20  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 79  TQ-EPIYIITEYMENGSLVDFL 99

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 21  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 80  TQ-EPIYIITEYMENGSLVDFL 100

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 78  TQ-EPIYIITEYMENGSLVDFL 98

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 480 KLGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
           +LG+G FG        P+   T   G+ +AVK+L   + + + +F+ E+ ++  LQH N+
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNT---GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 532 VKLLGCCIQADES--MLIYEYMPNKSLDFFI 560
           VK  G C  A      LI E++P  SL  ++
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEFLPYGSLREYL 107

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 473 DNFASYNKLGEGGFGPVYKGT---LVEGQE---IAVKRLSKGSGQGME-EFKNEVTLIAR 525
           +N      +GEG FG V++     L+  +    +AVK L + +   M+ +F+ E  L+A 
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             + N+VKLLG C       L++EYM    L+ F+
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 324 CTREPPFYIITEFM 337

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 78  CTREPPFYIIIEFM 91

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 78  CTREPPFYIITEFM 91

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 21  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 80  CTREPPFYIITEFM 93

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 20  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 79  CTREPPFYIITEFM 92

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 25  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 84  TQ-EPIYIITEYMENGSLVDFL 104

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 78  CTREPPFYIITEFM 91

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 24  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 83  CTREPPFYIITEFM 96

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 24  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 83  TQ-EPIYIITEYMENGSLVDFL 103

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 78  TQ-EPIYIITEYMENGSLVDFL 98

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            ++G G FG V+ G  +   ++A+K + +G+    E+F  E  ++ +L H  LV+L G C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           ++     L++E+M +  L  ++
Sbjct: 75  LEQAPICLVFEFMEHGCLSDYL 96

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 32  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 91  CTREPPFYIITEFM 104

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            ++G G FG V+ G  +   ++A+K + +G+    E+F  E  ++ +L H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           ++     L++E+M +  L  ++
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL 93

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 27  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 86  TQ-EPIYIITEYMENGSLVDFL 106

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 29  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 88  TQ-EPIYIITEYMENGSLVDFL 108

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 28  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 87  TQ-EPIYIITEYMENGSLVDFL 107

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           +KLG G +G VY+G   +    +AVK L + + + +EEF  E  ++  ++H NLV+LLG 
Sbjct: 17  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 538 CIQADESMLIYEYM 551
           C +     +I E+M
Sbjct: 76  CTREPPFYIITEFM 89

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            ++G G FG V+ G  +   ++A+K + +G+    E+F  E  ++ +L H  LV+L G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           ++     L++E+M +  L  ++
Sbjct: 70  LEQAPICLVFEFMEHGCLSDYL 91

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 15  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 74  TQ-EPIYIITEYMENGSLVDFL 94

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 25  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 84  TQ-EPIYIITEYMENGSLVDFL 104

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 14  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 73  TQ-EPIYIITEYMENGSLVDFL 93

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            ++G G FG V+ G  +   ++A+K + +G+    E+F  E  ++ +L H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           ++     L++E+M +  L  ++
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL 93

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V  G L V G+    +A+K L  G + +   +F +E +++ +  H N++ L 
Sbjct: 37  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   +    M+I EYM N SLD F+
Sbjct: 97  GVVTKCKPVMIITEYMENGSLDAFL 121

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            ++G G FG V+ G  +   ++A+K + +GS    ++F  E  ++ +L H  LV+L G C
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           ++     L++E+M +  L  ++
Sbjct: 92  LEQAPICLVFEFMEHGCLSDYL 113

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V  G L V G+    +A+K L  G + +   +F +E +++ +  H N++ L 
Sbjct: 16  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   +    M+I EYM N SLD F+
Sbjct: 76  GVVTKCKPVMIITEYMENGSLDAFL 100

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V  G L V G+    +A+K L  G + +   +F +E +++ +  H N++ L 
Sbjct: 22  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   +    M+I EYM N SLD F+
Sbjct: 82  GVVTKCKPVMIITEYMENGSLDAFL 106

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 481 LGEGGFGPVYKGTLVE----GQ----EIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
           LG+G F  ++KG   E    GQ    E+ +K L K      E F    +++++L H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
              G C   DE++L+ E++   SLD ++
Sbjct: 76  LNYGVCFCGDENILVQEFVKFGSLDTYL 103

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            KLG G FG V+ G      ++AVK L  G+   ++ F  E  L+  LQH  LV+L    
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 539 IQADESMLIYEYMPNKS-LDFFIFD 562
            + +   +I E+M   S LDF   D
Sbjct: 77  TKEEPIYIITEFMAKGSLLDFLKSD 101

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 451 MSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL-VEGQE---IAVKRLS 506
           M H  ED      +FA   +A+        +G G FG V  G L + G+    +A+K L 
Sbjct: 1   MPHTYEDPNQAVHEFAKEIEAS-CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK 59
Query: 507 KG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            G + +   +F  E +++ +  H N++ L G   ++   M++ EYM N SLD F+
Sbjct: 60  VGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           K+G G FG V++     G ++AVK L +     + + EF  EV ++ RL+H N+V  +G 
Sbjct: 44  KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 538 CIQADESMLIYEYMPNKSL 556
             Q     ++ EY+   SL
Sbjct: 103 VTQPPNLSIVTEYLSRGSL 121

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG-SGQGMEEFKN 518
           +FA    AT N +    +G G FG V  G L     +   +A+K L  G + +   +F  
Sbjct: 8   EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG-SGQGMEEFKN 518
           +FA    AT N +    +G G FG V  G L     +   +A+K L  G + +   +F  
Sbjct: 25  EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 83
Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           E +++ +  H N+++L G   ++   M++ EYM N SLD F+
Sbjct: 84  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGC 537
           K+G G FG V++     G ++AVK L +     + + EF  EV ++ RL+H N+V  +G 
Sbjct: 44  KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 538 CIQADESMLIYEYMPNKSL 556
             Q     ++ EY+   SL
Sbjct: 103 VTQPPNLSIVTEYLSRGSL 121

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDF 558
           H N+VKLL      ++  L++E++     DF
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKDF 91

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS----GQGMEE 515
           L E DFA +            +G GGFG VY+   + G E+AVK           Q +E 
Sbjct: 1   LLEIDFAELTLE-------EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIEN 52
Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY 550
            + E  L A L+H N++ L G C++     L+ E+
Sbjct: 53  VRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 453 HMKEDMELW--EFDFASIAKATDNFASY---------NKLGEGGFGPVYKGTL-VEGQE- 499
           HM   M+++   F F    +A   FA             +G G FG V  G L + G+  
Sbjct: 2   HMTPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE 61
Query: 500 --IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
             +A+K L  G + +   +F +E +++ +  H N++ L G   ++   M+I E+M N SL
Sbjct: 62  IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 557 DFFI 560
           D F+
Sbjct: 122 DSFL 125

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ E M N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G  G V  G L V GQ    +A+K L  G + +   +F +E +++ +  H N+++L 
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   +   +M++ EYM N SLD F+
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL 141

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           +LG+G FG VYK    E G   A K +   S + +E++  E+ ++A   H  +VKLLG  
Sbjct: 26  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 539 IQADESMLIYEYMPNKSLDFFIFDID 564
               +  ++ E+ P  ++D  + ++D
Sbjct: 86  YHDGKLWIMIEFCPGGAVDAIMLELD 111

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 18/117 (15%)
Query: 452 SHMKEDM---ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSK 507
            H++ D+   E+WE                 +LG+G FG VYK    E G   A K +  
Sbjct: 1   EHVRRDLDPNEVWEI--------------VGELGDGAFGKVYKAKNKETGALAAAKVIET 46
Query: 508 GSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDID 564
            S + +E++  E+ ++A   H  +VKLLG      +  ++ E+ P  ++D  + ++D
Sbjct: 47  KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD 103

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 74  TKQRPIFIITEYMANGCL 91

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 14  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 73  TKQRPIFIITEYMANGCL 90

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G  G V  G L V GQ    +A+K L  G + +   +F +E +++ +  H N+++L 
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   +   +M++ EYM N SLD F+
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL 141

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 21  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 80  TKQRPIFIITEYMANGCL 97

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 74  TKQRPIFIITEYMANGCL 91

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 89  TKQRPIFIITEYMANGCL 106

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 89  TKQRPIFIITEYMANGCL 106

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV+L G C
Sbjct: 10  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 539 IQADESMLIYEYMPNKSL 556
            +     +I EYM N  L
Sbjct: 69  TKQRPIFIITEYMANGCL 86

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDF 558
           H N+VKLL      ++  L++E++     DF
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLSMDLKDF 93

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            ++G G FG V+ G  +   ++A+K + +G+    E+F  E  ++ +L H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           ++     L+ E+M +  L  ++
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYL 94

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDF 558
           H N+VKLL      ++  L++E++     DF
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLSMDLKDF 94

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKG--TLVEGQEI--AVKRLSKG 508
           H  ED      +FA    AT N +    +G G FG V  G   L   +EI  A+K L  G
Sbjct: 26  HTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 509 -SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            + +   +F  E +++ +  H N+++L G   ++   M++ E M N SLD F+
Sbjct: 85  YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V +G L   G++   +A+K L  G + +   EF +E +++ + +H N+++L 
Sbjct: 22  IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G    +   M++ E+M N +LD F+
Sbjct: 82  GVVTNSMPVMILTEFMENGALDSFL 106

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V +G L   G++   +A+K L  G + +   EF +E +++ + +H N+++L 
Sbjct: 24  IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G    +   M++ E+M N +LD F+
Sbjct: 84  GVVTNSMPVMILTEFMENGALDSFL 108

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFI 121

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFI 142

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFI 141

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFI 123

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFI 123

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFI 128

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFI 182

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE D   I +  ++     KLG G FG V+  T  +  ++AVK +  GS   +E F  E 
Sbjct: 172 WEKDAWEIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEA 228
Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS-LDFFIFD 562
            ++  LQH  LVK L   +  +   +I E+M   S LDF   D
Sbjct: 229 NVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSD 270

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFI 122

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFI 124

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFI 123

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFI 123

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN---EVTLIARLQHRN 530
           F+   ++G G FG VY    V   E+ A+K++S    Q  E++++   EV  + +L+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 531 LVKLLGCCIQADESMLIYEY 550
            ++  GC ++   + L+ EY
Sbjct: 77  TIQYRGCYLREHTAWLVMEY 96

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 93  GICLRSEGSPLVVLPYMKHGDLRNFI 118

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 90  GICLRSEGSPLVVLPYMKHGDLRNFI 115

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE D   I +  ++     KLG G FG V+  T  +  ++AVK +  GS   +E F  E 
Sbjct: 178 WEKDAWEIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEA 234
Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS-LDFFIFD 562
            ++  LQH  LVK L   +  +   +I E+M   S LDF   D
Sbjct: 235 NVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSD 276

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFI 124

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFI 122

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 95  GICLRSEGSPLVVLPYMKHGDLRNFI 120

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 481 LGEGGFGPVYKGTLVE--GQEI--AVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG VY GTL++  G++I  AVK L++ +  G + +F  E  ++    H N++ LL
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 536 GCCIQADES-MLIYEYMPNKSLDFFI 560
           G C++++ S +++  YM +  L  FI
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFI 121

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 475 FASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGSGQGMEEFKN---EVTLIARLQHRN 530
           F+   ++G G FG VY    V   E+ A+K++S    Q  E++++   EV  + +L+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 531 LVKLLGCCIQADESMLIYEY 550
            ++  GC ++   + L+ EY
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 481 LGEGGFGPVYKGTL-VEGQE---IAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLL 535
           +G G FG V  G L + G+    +A+K L  G + +   +F +E +++ +  H N++ L 
Sbjct: 15  IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G   ++   M+I E+M N SLD F+
Sbjct: 75  GVVTKSTPVMIITEFMENGSLDSFL 99

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE D   I +  ++     KLG G FG V+  T  +  ++AVK +  GS   +E F  E 
Sbjct: 5   WEKDAWEIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEA 61
Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS-LDFFIFD 562
            ++  LQH  LVK L   +  +   +I E+M   S LDF   D
Sbjct: 62  NVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSD 103

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFL 88

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 65  HPNIVKLLDVIHTENKLYLVFEFL 88

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFL 85

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL 91

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL 91

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G  G V+ G      ++AVK L +GS    + F  E  L+ +LQH+ LV+L    
Sbjct: 19  ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q +   +I EYM N SL  F+
Sbjct: 78  TQ-EPIYIITEYMENGSLVDFL 98

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 481 LGEGGFGPVYKGTLVEGQ----EIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKL 534
           LGEG FG V +G L +      ++AVK  +L   S + +EEF +E   +    H N+++L
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 535 LGCCIQAD-----ESMLIYEYMPNKSLDFFIF 561
           LG CI+       + M+I  +M    L  ++ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHV 83

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQ 527
           + +NF    K+GEG +G VYK    + G+ +A+K++   +  +G+      E++L+  L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 528 HRNLVKLLGCCIQADESMLIYEYM 551
           H N+VKLL      ++  L++E++
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEHV 87

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 471 ATDNFASYNK---LGEGGFGPVYK-GTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL 526
           A ++F + +K   LG G FG V+K      G ++A K +     +  EE KNE++++ +L
Sbjct: 84  AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 527 QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
            H NL++L       ++ +L+ EY+    L   I D  +N
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN 183

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 471 ATDNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGSGQGMEEFK-NEVTLIARLQH 528
           ++  F    KLG G +  VYKG     G  +A+K +   S +G       E++L+  L+H
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 529 RNLVKLLGCCIQADESMLIYEYMPN 553
            N+V+L       ++  L++E+M N
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDN 87

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG-SGQGMEEFKN 518
           +FA    AT N +    +G G FG V  G L     +   +A+K L  G + +   +F  
Sbjct: 8   EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           E +++ +  H N+++L G   ++   M++ E M N SLD F+
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNL 531
           LGEG FG        P   GT   G+ +AVK L +G G  +   ++ E+ ++  L H ++
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 532 VKLLGCCIQADES--MLIYEYMPNKSLDFFI 560
           VK  GCC    E    L+ EY+P  SL  ++
Sbjct: 74  VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 104

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 474 NFASYNKLGEGGFGPV---YKGTLVEGQEIAVK-----RLSKGSGQGMEEFKNEVTLIAR 525
           N+     LGEG FG V   Y  T   GQ++A+K      L+K   QG    + E++ +  
Sbjct: 5   NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 60
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L+H +++KL       DE +++ EY  N+  D+ +
Sbjct: 61  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 95

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 474 NFASYNKLGEGGFGPV---YKGTLVEGQEIAVK-----RLSKGSGQGMEEFKNEVTLIAR 525
           N+     LGEG FG V   Y  T   GQ++A+K      L+K   QG    + E++ +  
Sbjct: 9   NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 64
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L+H +++KL       DE +++ EY  N+  D+ +
Sbjct: 65  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 99

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNL 531
           LGEG FG        P   GT   G+ +AVK L +G G  +   ++ E+ ++  L H ++
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 532 VKLLGCCIQADES--MLIYEYMPNKSLDFFI 560
           VK  GCC    E    L+ EY+P  SL  ++
Sbjct: 73  VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 103

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 474 NFASYNKLGEGGFGPV---YKGTLVEGQEIAVK-----RLSKGSGQGMEEFKNEVTLIAR 525
           N+     LGEG FG V   Y  T   GQ++A+K      L+K   QG    + E++ +  
Sbjct: 15  NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 70
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L+H +++KL       DE +++ EY  N+  D+ +
Sbjct: 71  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 105

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 32  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 91  LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 474 NFASYNKLGEGGFGPV---YKGTLVEGQEIAVK-----RLSKGSGQGMEEFKNEVTLIAR 525
           N+     LGEG FG V   Y  T   GQ++A+K      L+K   QG    + E++ +  
Sbjct: 14  NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 69
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L+H +++KL       DE +++ EY  N+  D+ +
Sbjct: 70  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 104

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 46  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL 269

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL 269

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+ ++   +  +G+      E++L+  L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL 84

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 473 DNFASYNKLGEGGFGPVYKG-TLVEGQEIAVKRLSKGS-GQGMEEFK-NEVTLIARLQHR 529
           +NF    K+GEG +G VYK    + G+ +A+ ++   +  +G+      E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N+VKLL      ++  L++E++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLY-AVV 331
Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL 352

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNL 531
           LGEG FG        P   GT   G+ +AVK L   +G Q    +K E+ ++  L H ++
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 532 VKLLGCCIQADES--MLIYEYMPNKSLDFFI 560
           +K  GCC  A  +   L+ EY+P  SL  ++
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            +LG G FG V+ GT     ++A+K L  G+    E F  E  ++ +L+H  LV+L    
Sbjct: 15  KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLY-AV 72
Query: 539 IQADESMLIYEYMPNKSLDFFIFDIDWNGLML 570
           +  +   ++ EYM   SL  F+ D +   L L
Sbjct: 73  VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKL 104

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNE 519
           L E D +++      F     +G G +G VYKG  V+  ++A  ++   +G   EE K E
Sbjct: 11  LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE 70
Query: 520 VTLIARL-QHRNLVKLLGCCIQAD 542
           + ++ +   HRN+    G  I+ +
Sbjct: 71  INMLKKYSHHRNIATYYGAFIKKN 94

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLS-KGSGQGMEEFK-NEVTLIARLQHRN 530
           + +    K+GEG +G VYK    +G+ +A+KR+      +G+      E++L+  L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 531 LVKLLGCCIQADESMLIYEYM 551
           +V L+          L++E+M
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM 101

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 15  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 72
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 73  SEEPIXIVTEYMSKGSLLDFL 93

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLS-KGSGQGMEEFK-NEVTLIARLQHRN 530
           + +    K+GEG +G VYK    +G+ +A+KR+      +G+      E++L+  L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 531 LVKLLGCCIQADESMLIYEYM 551
           +V L+          L++E+M
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM 101

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 249
Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFL 270

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 18  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 75
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 76  SEEPIYIVTEYMSKGSLLDFL 96

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 14  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 71
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 72  SEEPIYIVTEYMSKGSLLDFL 92

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 465 FASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
             S+      +  + K+G+G  G VY    +  GQE+A+++++       E   NE+ ++
Sbjct: 12  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 72  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFL 103

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFL 103

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 465 FASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
             S+      +  + K+G+G  G VY    +  GQE+A+++++       E   NE+ ++
Sbjct: 12  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 72  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 16  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 73
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 74  SEEPIYIVTEYMSKGSLLDFL 94

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFL 103

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 465 FASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
             S+      +  + K+G+G  G VY    +  GQE+A+++++       E   NE+ ++
Sbjct: 12  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 72  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 465 FASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
             S+      +  + K+G+G  G VY    +  GQE+A+++++       E   NE+ ++
Sbjct: 13  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 73  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNL 531
           LGEG FG        P   GT   G+ +AVK L    G Q    +K E+ ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 532 VKLLGCCI-QADESM-LIYEYMPNKSLDFFI 560
           +K  GCC  Q ++S+ L+ EY+P  SL  ++
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 481 LGEGGFG--------PVYKGTLVEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNL 531
           LGEG FG        P   GT   G+ +AVK L    G Q    +K E+ ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 532 VKLLGCCI-QADESM-LIYEYMPNKSLDFFI 560
           +K  GCC  Q ++S+ L+ EY+P  SL  ++
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 540 QADESMLIYEYMPNKS-LDFF 559
             +   ++ EYM   S LDF 
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFL 103

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 32  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 91  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 465 FASIAKATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLI 523
             S+      +  + K+G+G  G VY    +  GQE+A+++++       E   NE+ ++
Sbjct: 13  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              ++ N+V  L   +  DE  ++ EY+   SL
Sbjct: 73  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFL 269

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 31  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 32  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 91  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 23  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 82  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 38  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 97  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 131

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           KLG+G FG V+ GT      +A+K L  G+    E F  E  ++ +L+H  LV+L    +
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 540 QADESMLIYEYMPNKSLDFFI 560
             +   ++ EYM   SL  F+
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFL 100

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 474 NFASYNKLGEGGFGPVYKGTLVEGQ-------EIAVKRLSK-GSGQGMEEFKNEVTLIAR 525
           N      LG G FG VY+G  V G        ++AVK L +  S Q   +F  E  +I++
Sbjct: 31  NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             H+N+V+ +G  +Q+    ++ E M    L  F+
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 124

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL--VEGQE----IAVKRLSK-GSGQGM 513
           WEF          N      LGEG FG V K T   ++G+     +AVK L +  S   +
Sbjct: 18  WEF-------PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 514 EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            +  +E  ++ ++ H +++KL G C Q    +LI EY    SL  F+
Sbjct: 71  RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL--VEGQE----IAVKRLSK-GSGQGM 513
           WEF          N      LGEG FG V K T   ++G+     +AVK L +  S   +
Sbjct: 18  WEF-------PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 514 EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            +  +E  ++ ++ H +++KL G C Q    +LI EY    SL  F+
Sbjct: 71  RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	579
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-50
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-49
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-48
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-27
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-24
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-20
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-20
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-19
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-19
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-19
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-18
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-18
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-18
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-18
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-17
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-17
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-17
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-17
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-16
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-16
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-16
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-16
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-16
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-16
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-16
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-16
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-16
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-16
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-15
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-15
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-15
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-15
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-15
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-15
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-14
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-14
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-14
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-14
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-14
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-14
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	7e-14
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-14
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-13
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-13
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-13
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-11
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-10
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	4e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-10
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	8e-10
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-09
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	3e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-09
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	4e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	5e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-08
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	6e-08
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	7e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-08
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-06
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	1e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-06
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	3e-06
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	3e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-06
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-06
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	1e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-04
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	4e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	8e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  176 bits (448), Expect = 1e-50
 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGME-EFKNEVT 521
           F    +  A+DNF++ N LG GGFG VYKG L +G  +AVKRL +   QG E +F+ EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 522 LIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLML---TR 572
           +I+   HRNL++L G C+   E +L+Y YM N S+   + +   +   L    R
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  173 bits (441), Expect = 1e-49
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 17/120 (14%)

Query: 463 FDFASIAKATDNF------ASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG----SGQG 512
           F F  +   T+NF         NK+GEGGFG VYKG +     +AVK+L+      + + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73

Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD------IDWN 566
            ++F  E+ ++A+ QH NLV+LLG     D+  L+Y YMPN SL   +        + W+
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  169 bits (430), Expect = 5e-48
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTL 522
                + +AT+NF     +G G FG VYKG L +G ++A+KR +  S QG+EEF+ E+  
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 523 IARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLT 571
           ++  +H +LV L+G C + +E +LIY+YM N +L   ++  D   + ++
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  112 bits (282), Expect = 1e-27
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 8/124 (6%)

Query: 452 SHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ 511
            H        +    ++   +           G FG V+K   +  + +AVK       Q
Sbjct: 3   HHHHHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQ-LLNEYVAVKIFPIQDKQ 61

Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQAD----ESMLIYEYMPNKSLDFFIFD--IDW 565
             +  + EV  +  ++H N+++ +G   +      +  LI  +    SL  F+    + W
Sbjct: 62  SWQ-NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSW 120

Query: 566 NGLM 569
           N L 
Sbjct: 121 NELC 124

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  102 bits (257), Expect = 3e-24
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 462 EFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVT 521
           E   +  +   DN      +G G +G VYKG+L + + +AVK  S  + Q     K  + 
Sbjct: 2   EAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEK-NIY 59

Query: 522 LIARLQHRNLVKLLGCCIQADES-----MLIYEYMPNKSLDFFIFD--IDWNGLM 569
            +  ++H N+ + +    +         +L+ EY PN SL  ++     DW    
Sbjct: 60  RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC 114

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG----SGQGMEE 515
           L E DFA +            +G GGFG VY+     G E+AVK           Q +E 
Sbjct: 1   LLEIDFAELTLE-------EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIEN 52

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            + E  L A L+H N++ L G C++     L+ E+     L
Sbjct: 53  VRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL 93

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 90.1 bits (224), Expect = 6e-20
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 457 DMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGME 514
           D +  +  +  +           K+G G FG V++     G ++AVK L +     + + 
Sbjct: 28  DGDDMDIPWCDLNIK-------EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN 79

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           EF  EV ++ RL+H N+V  +G   Q     ++ EY+   SL
Sbjct: 80  EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 88.5 bits (220), Expect = 2e-19
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNE 519
             F  + +            LG+G FG   K T    G+ + +K L +   +    F  E
Sbjct: 5   RIFRPSDLIHG-------EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKE 57

Query: 520 VTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD----IDWNGLM 569
           V ++  L+H N++K +G   +      I EY+   +L   I        W+  +
Sbjct: 58  VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV 111

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 87.8 bits (218), Expect = 4e-19
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 449 TKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-----EGQEIAVK 503
             M    ED +  +F+   +           +LG+G FG V            G+ +AVK
Sbjct: 24  GAMGSAFEDRDPTQFEERHLKFL-------QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK 76

Query: 504 RLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES--MLIYEYMPNKSLDFF 559
           +L   + + + +F+ E+ ++  LQH N+VK  G C  A      LI EY+P  SL  +
Sbjct: 77  KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 86.2 bits (214), Expect = 7e-19
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 17/106 (16%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQG----- 512
            L       I           ++G+GGFG V+KG LV+    +A+K L  G  +G     
Sbjct: 12  RLPTLADNEIEYE-------KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64

Query: 513 --MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
              +EF+ EV +++ L H N+VKL G         ++ E++P   L
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDL 108

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 85.7 bits (213), Expect = 8e-19
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLG 536
            KL E   G ++KG   +G +I VK L     S +   +F  E   +    H N++ +LG
Sbjct: 16  TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74

Query: 537 CCIQADES--MLIYEYMPNKSL 556
            C         LI  +MP  SL
Sbjct: 75  ACQSPPAPHPTLITHWMPYGSL 96

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 86.2 bits (214), Expect = 8e-19
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGSGQGMEE 515
            +F+   +           +LG+G FG V            G+ +AVK+L   + + + +
Sbjct: 5   TQFEERHLKFL-------QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADES--MLIYEYMPNKSLDFF 559
           F+ E+ ++  LQH N+VK  G C  A      LI EY+P  SL  +
Sbjct: 58  FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 85.4 bits (212), Expect = 2e-18
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 454 MKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSK 507
           M   + +       I           +LGEG FG V+           +   +AVK L  
Sbjct: 3   MHSGIHVQHIKRRDIVLK-------RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD 55

Query: 508 GSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            +    ++F+ E  L+  LQH ++VK  G C   D  ++++EYM +  L+ F
Sbjct: 56  PTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 13/109 (11%)

Query: 457 DMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSG 510
           D  +       I           +LGEG FG V+           +   +AVK L + S 
Sbjct: 32  DACVHHIKRRDIVLK-------WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE 84

Query: 511 QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
              ++F+ E  L+  LQH+++V+  G C +    ++++EYM +  L+ F
Sbjct: 85  SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQ 511
           +L E   +++           +LGE  FG VYKG L       + Q +A+K L     G 
Sbjct: 2   KLKEISLSAVRFM-------EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP 54

Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
             EEF++E  L ARLQH N+V LLG   +     +I+ Y  +  L  F
Sbjct: 55  LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEF 102

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 15/108 (13%)

Query: 460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL--------VEGQEIAVKRLSKGSGQ 511
             +     +            LG+G F  ++KG          +   E+ +K L K    
Sbjct: 2   FHKIRNEDLIFN-------ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN 54

Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
             E F    +++++L H++LV   G C+  DE++L+ E++   SLD +
Sbjct: 55  YSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 83.5 bits (207), Expect = 7e-18
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 12/116 (10%)

Query: 443 LKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAV 502
           +KK         ++  + WE     I           ++G G FG VYKG      ++AV
Sbjct: 1   MKKGHHHHHHGSRDAADDWEIPDGQITVG-------QRIGSGSFGTVYKGKW--HGDVAV 51

Query: 503 KRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           K L+    + Q ++ FKNEV ++ + +H N++  +G      +  ++ ++    SL
Sbjct: 52  KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSL 106

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 83.5 bits (207), Expect = 9e-18
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 14/106 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGSGQGMEE 515
             F+   +          ++LG+G FG V            G  +AVK+L         +
Sbjct: 18  TIFEERHLKYI-------SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADES--MLIYEYMPNKSLDFF 559
           F+ E+ ++  L    +VK  G           L+ EY+P+  L  F
Sbjct: 71  FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF 116

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 83.2 bits (206), Expect = 1e-17
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 11/110 (10%)

Query: 449 TKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG 508
            K S     ++ W+  F  +            +G+G FG VY G      E+A++ +   
Sbjct: 16  RKASQTSIFLQEWDIPFEQLEIG-------ELIGKGRFGQVYHGRW--HGEVAIRLIDIE 66

Query: 509 --SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
             +   ++ FK EV    + +H N+V  +G C+      +I      ++L
Sbjct: 67  RDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
             +G G FG V K      +++A+K++   S    + F  E+  ++R+ H N+VKL G C
Sbjct: 14  EVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGAC 70

Query: 539 IQADESMLIYEYMPNKSLDFFI 560
           +      L+ EY    SL   +
Sbjct: 71  LNP--VCLVMEYAEGGSLYNVL 90

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 81.6 bits (202), Expect = 3e-17
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 15/108 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGSG-QGME 514
             F+   + +          LGEG FG V            G+++AVK L   SG   + 
Sbjct: 16  THFEKRFLKRI-------RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA 68

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADES--MLIYEYMPNKSLDFFI 560
           + K E+ ++  L H N+VK  G C +   +   LI E++P+ SL  ++
Sbjct: 69  DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 15/108 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGSG-QGME 514
             F    + K          LGEG FG V            G+ +AVK L   +G Q   
Sbjct: 26  TVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRS 78

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADES--MLIYEYMPNKSLDFFI 560
            +K E+ ++  L H +++K  GCC  A  +   L+ EY+P  SL  ++
Sbjct: 79  GWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 79.9 bits (198), Expect = 6e-17
 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           W  D + +           ++G G FG V+ G  +   ++A+K + +G+    E+F  E 
Sbjct: 3   WVIDPSELTFV-------QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEA 54

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            ++ +L H  LV+L G C++     L+ E+M +  L  +
Sbjct: 55  EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE D   +           +LG G FG V  G      ++A+K + +GS    +EF  E 
Sbjct: 19  WEIDPKDLTFL-------KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEA 70

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            ++  L H  LV+L G C +     +I EYM N  L  +
Sbjct: 71  KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 79.7 bits (197), Expect = 2e-16
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQ 511
           +L E    +I            LG G FG VY+G +          ++AVK L +  S Q
Sbjct: 23  DLKEVPRKNITLI-------RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 75

Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
              +F  E  +I++  H+N+V+ +G  +Q+    ++ E M    L  F
Sbjct: 76  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF 123

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 78.4 bits (194), Expect = 2e-16
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
            E     I           +LG G FG V  G      ++AVK + +GS    +EF  E 
Sbjct: 3   MELKREEITLL-------KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEA 54

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
             + +L H  LVK  G C +     ++ EY+ N  L  +
Sbjct: 55  QTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           W  +   +            +G+G FG V  G    G ++AVK +   +    + F  E 
Sbjct: 16  WALNMKELKLL-------QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEA 65

Query: 521 TLIARLQHRNLVKLLGCCIQADES-MLIYEYMPNKSLDFF 559
           +++ +L+H NLV+LLG  ++      ++ EYM   SL  +
Sbjct: 66  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 105

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 14/106 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV---EGQEI--AVKRLSKGSG-QGME 514
             F    + K          LG G FG V+KG  +   E  +I   +K +   SG Q  +
Sbjct: 8   RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 60

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
              + +  I  L H ++V+LLG C       L+ +Y+P  SL   +
Sbjct: 61  AVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHV 105

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 79.0 bits (195), Expect = 5e-16
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQ 511
           +L E    +I            LG G FG VY+G +          ++AVK L +  S Q
Sbjct: 64  DLKEVPRKNITLI-------RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 116

Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
              +F  E  +I++  H+N+V+ +G  +Q+    ++ E M    L  F
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 164

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 78.4 bits (194), Expect = 5e-16
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 479 NKLGEGGFGPVYKGTLVEGQE-----IAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLV 532
             LG G FG VYKG  +   E     +A+K L + +     +E  +E  ++A + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +LLG C+      LI + MP   L  ++
Sbjct: 81  RLLGICLT-STVQLITQLMPFGCLLDYV 107

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 78.0 bits (193), Expect = 6e-16
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGM 513
           WEF   ++            LGEG FG V K T            +AVK L +  S   +
Sbjct: 18  WEFPRKNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70

Query: 514 EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            +  +E  ++ ++ H +++KL G C Q    +LI EY    SL
Sbjct: 71  RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 78.5 bits (194), Expect = 6e-16
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 479 NKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNL 531
             +GEG FG V++              +AVK L +  S     +F+ E  L+A   + N+
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFF 559
           VKLLG C       L++EYM    L+ F
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEF 140

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 78.1 bits (193), Expect = 7e-16
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 12/106 (11%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQE---IAVKRLSKG-SGQGME 514
                D+  I          + +GEG FG V K  + +       A+KR+ +  S     
Sbjct: 18  IYPVLDWNDIKFQ-------DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 70

Query: 515 EFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           +F  E+ ++ +L  H N++ LLG C       L  EY P+ +L  F
Sbjct: 71  DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 116

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 77.7 bits (192), Expect = 8e-16
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQ 511
           + WE     I  +        +LG+G FG VY+G             +A+K +++  S +
Sbjct: 18  DEWEVAREKITMS-------RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70

Query: 512 GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
              EF NE +++      ++V+LLG   Q   +++I E M    L  +
Sbjct: 71  ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 118

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 77.7 bits (192), Expect = 8e-16
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 18/120 (15%)

Query: 452 SHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSK 507
             ++  +E    D   +            LGEG FG V +G L        ++AVK +  
Sbjct: 20  EELQNKLEDVVIDRNLLILG-------KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL 72

Query: 508 G--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-----ESMLIYEYMPNKSLDFFI 560
              S + +EEF +E   +    H N+++LLG CI+       + M+I  +M    L  ++
Sbjct: 73  DNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 77.4 bits (191), Expect = 9e-16
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 19/121 (15%)

Query: 452 SHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSK 507
             +KE +E                     LG+G FG V +  L        ++AVK L  
Sbjct: 9   DELKEKLEDVLIPEQQFTLG-------RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61

Query: 508 G--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES------MLIYEYMPNKSLDFF 559
              +   +EEF  E   +    H ++ KL+G  +++         M+I  +M +  L  F
Sbjct: 62  DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF 121

Query: 560 I 560
           +
Sbjct: 122 L 122

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 479 NKLGEGGFGPVYKGTLVEG----QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVK 533
             +G G FG VY GTL++        AVK L++      + +F  E  ++    H N++ 
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 534 LLGCCIQADES-MLIYEYMPNKSLDFFI 560
           LLG C++++ S +++  YM +  L  FI
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNE 519
           WE +   I          +KLG G +G VY+G        +AVK L + + + +EEF  E
Sbjct: 8   WEMERTDITMK-------HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 59

Query: 520 VTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
             ++  ++H NLV+LLG C +     +I E+M   +L  +
Sbjct: 60  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 77.8 bits (192), Expect = 2e-15
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           W  +   +            +G+G FG V  G    G ++AVK +   +    + F  E 
Sbjct: 188 WALNMKELKLL-------QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEA 237

Query: 521 TLIARLQHRNLVKLLGCCIQADES-MLIYEYMPNKSLDFF 559
           +++ +L+H NLV+LLG  ++      ++ EYM   SL  +
Sbjct: 238 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 277

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%)

Query: 479 NKLGEGGFGPVYKGTLVEG----QEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVK 533
             +G G FG VY GTL++        AVK L++ +  G + +F  E  ++    H N++ 
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154

Query: 534 LLGCCIQADES-MLIYEYMPNKSLDFFI 560
           LLG C++++ S +++  YM +  L  FI
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI 182

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE    ++           +LG G FG V+ G      ++AVK L +GS    + F  E 
Sbjct: 8   WEVPRETLKLV-------ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEA 59

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            L+ +LQH+ LV+L     Q +   +I EYM N SL  F
Sbjct: 60  NLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 76.5 bits (189), Expect = 3e-15
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG-SGQGMEEFKN 518
           W  +   +           ++G G FG V+ G L  +   +AVK   +        +F  
Sbjct: 109 WVLNHEDLVLG-------EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161

Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           E  ++ +  H N+V+L+G C Q     ++ E +       F
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF 202

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 75.4 bits (186), Expect = 4e-15
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 479 NKLGEGGFGPVYKGTLVEGQE----IAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVK 533
             +G+G FG VY G  ++  +     A+K LS+ +    +E F  E  L+  L H N++ 
Sbjct: 27  RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86

Query: 534 LLGCCIQADES-MLIYEYMPNKSLDFFI 560
           L+G  +  +    ++  YM +  L  FI
Sbjct: 87  LIGIMLPPEGLPHVLLPYMCHGDLLQFI 114

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 75.4 bits (186), Expect = 5e-15
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 479 NKLGEGGFGPVYKGTLVEGQE-----IAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLV 532
             LG G FG VYKG  +   E     +A+K L + +     +E  +E  ++A + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +LLG C+      LI + MP   L  ++
Sbjct: 81  RLLGICLT-STVQLITQLMPFGCLLDYV 107

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 76.3 bits (188), Expect = 7e-15
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNE 519
           WE +   I          +KLG G +G VY+G        +AVK L + + + +EEF  E
Sbjct: 215 WEMERTDITMK-------HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 266

Query: 520 VTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
             ++  ++H NLV+LLG C +     +I E+M   +L  +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 74.6 bits (184), Expect = 7e-15
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 16/109 (14%)

Query: 457 DMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-S 509
           D   WEF    +            LG G FG V +            + +AVK L +G +
Sbjct: 18  DASKWEFPRDRLKLG-------KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 70

Query: 510 GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES-MLIYEYMPNKSL 556
                   +E+ ++  +  H N+V LLG C +     M+I E+    +L
Sbjct: 71  HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 74.7 bits (184), Expect = 9e-15
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQE-----IAVKRLSKG-SGQGME 514
            E   + + +          +G G FG VYKG L          +A+K L  G + +   
Sbjct: 39  TEIHPSCVTRQ-------KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV 91

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           +F  E  ++ +  H N+++L G   +    M+I EYM N +LD F
Sbjct: 92  DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF 136

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 74.6 bits (184), Expect = 1e-14
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 17/106 (16%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKG-SGQ 511
           WEF    +            LGEG FG V     V        E   +AVK L    + +
Sbjct: 30  WEFPRDKLTLG-------KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82

Query: 512 GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            + +  +E+ ++  + +H+N++ LLG C Q     +I EY    +L
Sbjct: 83  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGSGQGM-EE 515
            E + + I            +G G  G V  G L         +A+K L  G  +    +
Sbjct: 44  REIEASRIHIE-------KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           F +E +++ +  H N+++L G   +   +M++ EYM N SLD F
Sbjct: 97  FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 12/104 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQE----IAVKRLSKGSG-QGMEE 515
            E D  +I+           +G G FG V  G L    +    +A+K L  G   +   +
Sbjct: 40  KELDATNISID-------KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           F  E +++ +  H N+++L G   ++   M++ EYM N SLD F
Sbjct: 93  FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 15/104 (14%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGM 513
           WEF   ++            LG G FG V   T           ++AVK L +       
Sbjct: 40  WEFPRENLEFG-------KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER 92

Query: 514 EEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           E   +E+ ++ +L  H N+V LLG C  +    LI+EY     L
Sbjct: 93  EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGM 513
           WEF    ++           LG G FG V + T            +AVK L         
Sbjct: 18  WEFPRNRLSFG-------KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER 70

Query: 514 EEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           E   +E+ +++ L  H N+V LLG C     +++I EY     L
Sbjct: 71  EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 17/106 (16%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKG-SGQ 511
           WEF    +            LGEG FG V     V        E   +AVK L    + +
Sbjct: 76  WEFPRDKLTLG-------KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 128

Query: 512 GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            + +  +E+ ++  + +H+N++ LLG C Q     +I EY    +L
Sbjct: 129 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 72.7 bits (179), Expect = 3e-14
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 13/104 (12%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV--EGQEI--AVKRLSKG-SGQGMEE 515
           +E     I            +GEG FG V++G  +  E   +  A+K      S    E+
Sbjct: 10  YEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 62

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           F  E   + +  H ++VKL+G   + +   +I E      L  F
Sbjct: 63  FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSF 105

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 73.6 bits (181), Expect = 3e-14
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 17/106 (16%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKG-SGQ 511
           WE     +            LGEG FG V     +           ++AVK L    + +
Sbjct: 64  WELPRDRLVLG-------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 116

Query: 512 GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            + +  +E+ ++  + +H+N++ LLG C Q     +I EY    +L
Sbjct: 117 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 74.0 bits (182), Expect = 3e-14
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE    S+           KLG G FG V+  T  +  ++AVK +  GS   +E F  E 
Sbjct: 183 WEIPRESLKLE-------KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEA 234

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
            ++  LQH  LVKL     + +   +I E+M   SL  F
Sbjct: 235 NVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 272

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 73.1 bits (180), Expect = 3e-14
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 15/106 (14%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQ 511
           E WEF   ++            LG G FG V + T           ++AVK L       
Sbjct: 39  EKWEFPRNNLQFG-------KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91

Query: 512 GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
             E   +E+ +++ L QH N+V LLG C      ++I EY     L
Sbjct: 92  EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 15/107 (14%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL--VEGQEI--AVKRLSKG---SGQGM 513
                  +           KLG+G FG V +G      G+ +  AVK L        + M
Sbjct: 13  CLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65

Query: 514 EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           ++F  EV  +  L HRNL++L G  +      ++ E  P  SL   +
Sbjct: 66  DDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRL 111

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 71.5 bits (176), Expect = 6e-14
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 480 KLGEGGFGPVYKGTLVEGQE---IAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLL 535
           +LG G FG V +G     ++   +A+K L +G+     EE   E  ++ +L +  +V+L+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76

Query: 536 GCCIQADESMLIYEYMPNKSLDFF 559
           G C QA+  ML+ E      L  F
Sbjct: 77  GVC-QAEALMLVMEMAGGGPLHKF 99

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 73.7 bits (181), Expect = 7e-14
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 13/104 (12%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV--EGQEI--AVKRLSKG-SGQGMEE 515
           +E     I            +GEG FG V++G  +  E   +  A+K      S    E+
Sbjct: 385 YEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           F  E   + +  H ++VKL+G   + +   +I E      L  F
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSF 480

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 71.1 bits (175), Expect = 7e-14
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 13/105 (12%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV--EGQEI--AVKRLSKG-SGQGMEE 515
           +      +            LGEG FG VY+G     +G++I  AVK   K  +    E+
Sbjct: 7   YGIAREDVVLN-------RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK 59

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           F +E  ++  L H ++VKL+G   + + + +I E  P   L  ++
Sbjct: 60  FMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL 103

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 72.7 bits (178), Expect = 1e-13
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 480 KLGEGGFGPVYKGTL-VEGQEI--AVKRLSKGSGQGM-EEFKNEVTLIARLQHRNLVKLL 535
           +LG G FG V +G   +  ++I  A+K L +G+ +   EE   E  ++ +L +  +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 536 GCCIQADESMLIYEYMPNKSLDFFI 560
           G C QA+  ML+ E      L  F+
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFL 426

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNE--VTLIARLQHRNLVKLLG 536
             +G+G +G V++G+  +G+ +AVK  S    +  + +  E  +     L+H N++  + 
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 537 CCIQADES----MLIYEYMPNKSL 556
             + +  S     LI  Y    SL
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSL 93

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 480 KLGEGGFGPVYKGTL-VEGQEI--AVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKL 534
           +LG G FG V KG   ++      AVK L          +E   E  ++ +L +  +V++
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 535 LGCCIQADESMLIYEYMPNKSLDFF 559
           +G C +A+  ML+ E      L+ +
Sbjct: 84  IGIC-EAESWMLVMEMAELGPLNKY 107

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNE--VTLIARLQHRNLVKLLG 536
            ++G+G +G V+ G    G+++AVK            +  E  +     ++H N++  + 
Sbjct: 43  KQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFIA 98

Query: 537 CCIQADES----MLIYEYMPNKSLDFFIFD--IDWNGLM 569
             I+   S     LI +Y  N SL  ++    +D   ++
Sbjct: 99  ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSML 137

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 71.8 bits (176), Expect = 2e-13
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN 518
           + WE    S+           KLG+G FG V+ GT      +A+K L  G+    E F  
Sbjct: 260 DAWEIPRESLRLE-------VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQ 311

Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           E  ++ +L+H  LV+L     + +   ++ EYM   SL  F
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 351

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)

Query: 459 ELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN 518
           + WE    S+           KLG+G FG V+ GT      +A+K L  G+    E F  
Sbjct: 177 DAWEIPRESLRLE-------VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQ 228

Query: 519 EVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           E  ++ +L+H  LV+L     + +   ++ EYM   SL  F
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
           LG+G +G VY G  L     IA+K + +   +  +    E+ L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 540 QADESMLIYEYMPNKSL 556
           +     +  E +P  SL
Sbjct: 90  ENGFIKIFMEQVPGGSL 106

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 69.8 bits (171), Expect = 5e-13
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNE--VTLIARLQHRNLVKLLG 536
             +G+G FG V++G    G+E+AVK  S    +    +  E  +     L+H N++  + 
Sbjct: 48  ESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIA 103

Query: 537 CCIQADES----MLIYEYMPNKSL 556
              + + +     L+ +Y  + SL
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSL 127

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
           ++G G F  VYKG       E+A    +  K +    + FK E  ++  LQH N+V+   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 537 CCIQADESM----LIYEYMPNKSL 556
                 +      L+ E M + +L
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTL 116

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 65.9 bits (161), Expect = 6e-12
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 440 RKKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQ 498
             +        ++H +    L                SY K+GEG  G V        G+
Sbjct: 14  GTENLYFQSGVVTHEQFKAALRMV--VDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGR 71

Query: 499 EIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD 557
           ++AVK +     Q  E   NEV ++   QH N+V++    +  +E  ++ E++   +L 
Sbjct: 72  QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
              +  + K+G+G  G VY    V  GQE+A+++++       E   NE+ ++   ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSL 556
           +V  L   +  DE  ++ EY+   SL
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSL 104

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            + +    +LG+G FG VYK    E G   A K +   S + +E++  E+ ++A   H  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLD 557
           +VKLLG      +  ++ E+ P  ++D
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVD 104

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           KLGEGGF  V     L +G   A+KR+     Q  EE + E  +     H N+++L+  C
Sbjct: 36  KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95

Query: 539 IQADESM----LIYEYMPNKSLDFFI 560
           ++   +     L+  +    +L   I
Sbjct: 96  LRERGAKHEAWLLLPFFKRGTLWNEI 121

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 16/113 (14%)

Query: 457 DMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSG 510
           D   WEF         D       LG G FG V +            + +AVK L +G+ 
Sbjct: 13  DASKWEFPR-------DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 65

Query: 511 QG-MEEFKNEVTLIARL-QHRNLVKLLGCCIQADES-MLIYEYMPNKSLDFFI 560
                   +E+ ++  +  H N+V LLG C +     M+I E+    +L  ++
Sbjct: 66  HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNL--VKL 534
            ++G GG   V++    + Q  A+K ++      Q ++ ++NE+  + +LQ  +   ++L
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93

Query: 535 LGCCIQADESMLIYEY 550
               I      ++ E 
Sbjct: 94  YDYEITDQYIYMVMEC 109

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 19  DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLT 78
           + +T  + +  G++L      +                + Y      T  W +N      
Sbjct: 2   NLLTNGEGLYAGQSLD--VEPYHFIMQEDCNL------VLYDH---STSVWASNTGILGK 50

Query: 79  DQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSF 138
                +  +    V+ D   R  W+S++     N V+ L + GN+V+    Y S +W + 
Sbjct: 51  KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI----YGSDIWSTG 106

Query: 139 DH 140
            +
Sbjct: 107 TY 108

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNL--VKL 534
            ++G GG   V++    + Q  A+K ++      Q ++ ++NE+  + +LQ  +   ++L
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 535 LGCCIQADESMLIYEY 550
               I      ++ E 
Sbjct: 75  YDYEITDQYIYMVMEC 90

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 479 NKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFK-NEVTLIARLQHRNLVKLLG 536
            ++G G FG V++      G + AVK++       +E F+  E+   A L    +V L G
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYG 117

Query: 537 CCIQADESMLIYEYMPNKSL 556
              +     +  E +   SL
Sbjct: 118 AVREGPWVNIFMELLEGGSL 137

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 12/98 (12%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT------LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR 525
           +     ++ LGEG F  VY+ T          Q+  +K     +     EF     L+ R
Sbjct: 64  SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMER 120

Query: 526 LQ---HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           L+       +K     +  + S+L+ E     +L   I
Sbjct: 121 LKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 60.2 bits (146), Expect = 7e-10
 Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNL--VKL 534
            ++G GG   V++    + Q  A+K ++      Q ++ ++NE+  + +LQ  +   ++L
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 535 LGCCIQADESMLIYEY 550
               I      ++ E 
Sbjct: 122 YDYEITDQYIYMVMEC 137

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 55.6 bits (134), Expect = 8e-10
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 19  DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLT 78
           ++++   S+  G +L  V  ++ L              + Y         W +N  T   
Sbjct: 2   NSLSSPNSLFTGHSL-EVGPSYRLIMQGDCNF------VLYDS---GKPVWASN--TGGL 49

Query: 79  DQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS 137
                L + + G +V+ D  +R+ W + T+    + V+ L    N+V+    Y  ++W +
Sbjct: 50  GSGCRLTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVI----YGPVVWAT 105

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 59.7 bits (145), Expect = 9e-10
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLS---KGSGQGMEEFKNEVTLIARLQ 527
              F+   ++G G FG VY    V   + +A+K++S   K S +  ++   EV  + +L+
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLD 557
           H N ++  GC ++   + L+ EY    + D
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASD 142

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH 528
            NF    K+G G F  VY+   L++G  +A+K++        +   +   E+ L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            N++K     I+ +E  ++ E      L   I
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMI 123

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
            +F     +G GGFG V+K    ++G+   +KR+   +    E+ + EV  +A+L H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFFIF 561
           V   GC    D          ++S    +F
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHR 529
           + +    K+GEG FG         +G++  +K ++    S +  EE + EV ++A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           N+V+      +     ++ +Y     L   I
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRI 114

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
             +F     LG+G FG V K    ++ +  A+K++     + +    +EV L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +V+     ++    +     +  KS  F  
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            + F    KLGEG +G VYK    E GQ +A+K++       ++E   E++++ +    +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPH 85

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLD 557
           +VK  G   +  +  ++ EY    S+ 
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVS 112

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN-EVTLIARLQHRN 530
              + +   +G G FG V++  LVE  E+A+K++ +      + FKN E+ ++  ++H N
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPN 93

Query: 531 LVKLLGCCIQADESM------LIYEYMP 552
           +V L        +        L+ EY+P
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 58.7 bits (142), Expect = 3e-09
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            D++  + +LG G FG V++ T    G   A K +        E  + E+  ++ L+H  
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215

Query: 531 LVKLLGCCIQADESMLIYEYM 551
           LV L       +E ++IYE+M
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFM 236

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 53.8 bits (129), Expect = 3e-09
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 18  NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPL 77
           +D +     +  G +L    G +     +        L ++          W +   T  
Sbjct: 1   SDRLNSGHQLDTGGSLA--EGGYLFIIQNDC-----NLVLYDNN----RAVWASG--TNG 47

Query: 78  TDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS 137
                +L + + G +++    R  W+SNT+    N  + L    N+V+ D + N+ +W +
Sbjct: 48  KASGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNS-NNAIWAT 106

Query: 138 FDHPC 142
             +  
Sbjct: 107 HTNVG 111

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 9/114 (7%)

Query: 451 MSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS 509
           M+       L E D +++      F     +G G +G VYKG  V+ GQ  A+K +   +
Sbjct: 2   MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVT 60

Query: 510 GQGMEEFKNEVTLIARL-QHRNLVKLLGC------CIQADESMLIYEYMPNKSL 556
           G   EE K E+ ++ +   HRN+    G           D+  L+ E+    S+
Sbjct: 61  GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV 114

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 53.7 bits (129), Expect = 4e-09
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 18/121 (14%)

Query: 18  NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPL 77
           ++ +   Q++    +L    G + L   +          + Y+        W +N  T  
Sbjct: 2   DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCNL------VKYQN---GRQIWASN--TDR 48

Query: 78  TDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQ 136
                 L + S G +V+ D  +   W S          + L   G  V+    Y  +LW 
Sbjct: 49  RGSGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVI----YGPVLWS 104

Query: 137 S 137
            
Sbjct: 105 L 105

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 463 FDFASIAKATDNFASY------NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE 515
           FD   +        S+        LG G FG V+K      G ++A K +     +  EE
Sbjct: 73  FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE 132

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
            KNE++++ +L H NL++L       ++ +L+ EY+
Sbjct: 133 VKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 57.6 bits (139), Expect = 5e-09
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVKLLGC 537
            LG+G    V++G   + G   A+K  +  S     +    E  ++ +L H+N+VKL   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF-A 74

Query: 538 CIQADESMLIY---EYMPNKSLDFFI 560
             +   +       E+ P  SL   +
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVL 100

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVKLLGC 537
            LG+G    V++G   + G   A+K  +  S     +    E  ++ +L H+N+VKL   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA- 74

Query: 538 CIQADESMLIY---EYMPNKSLDFFI 560
             +   +       E+ P  SL   +
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVL 100

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEE-FKNEVTLIARLQHRNLVKLLG 536
           LG+GGF   ++ +  +  +  A K + K         E    E+++   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 537 CCIQADESM--LIYEYMPNKSL 556
                D     ++ E    +SL
Sbjct: 109 FF--EDNDFVFVVLELCRRRSL 128

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 56.4 bits (137), Expect = 7e-09
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEE-FKNEVTLIARLQHRNLVKLLG 536
           LG+GGF   ++ +  +  +  A K + K         E    E+++   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 537 CCIQADESM--LIYEYMPNKSL 556
                D     ++ E    +SL
Sbjct: 83  FF--EDNDFVFVVLELCRRRSL 102

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 57.0 bits (138), Expect = 7e-09
 Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 440 RKKLKKQGLTKMSHMKEDMELWE-FDFASIAKATDNFASY----NKLGEGGFGPVYKGTL 494
           + + K  G     + K   ++W+ +    +     +   Y     +LG G FG V++   
Sbjct: 13  KVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVE 72

Query: 495 VE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
              G+    K ++          KNE++++ +L H  L+ L        E +LI E++
Sbjct: 73  KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHR 529
            + F    K+G+G FG V+KG      + +A+K +     +  +E+ + E+T++++    
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSL 556
            + K  G  ++  +  +I EY+   S 
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSA 107

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 14/87 (16%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLIA 524
           + +    K+GEG +G VYK    +G+ +A+KR+       ++            E++L+ 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74

Query: 525 RLQHRNLVKLLGCCIQADESMLIYEYM 551
            L H N+V L+          L++E+M
Sbjct: 75  ELHHPNIVSLIDVIHSERCLTLVFEFM 101

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 14/102 (13%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLS-KGSGQGMEEFKNEVTLIARLQHRN 530
            +F     LG GGFG V++    V+    A+KR+         E+   EV  +A+L+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 531 LVKLLGCCI---------QADESMLIY---EYMPNKSLDFFI 560
           +V+     +          +   + +Y   +    ++L  ++
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 55.8 bits (135), Expect = 2e-08
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--S 509
           H          +        + +     LG+G FG V K       QE AVK ++K    
Sbjct: 2   HHHHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK 61

Query: 510 GQGMEEFKNEVTLIARLQHRNLVKLLG 536
            +       EV L+ +L H N++KL  
Sbjct: 62  NKDTSTILREVELLKKLDHPNIMKLFE 88

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLS-KGSGQGMEEFKNEVTLIARLQHRN 530
           D++     +G G    V         +++A+KR++ +     M+E   E+  +++  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSL 556
           +V      +  DE  L+ + +   S+
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSV 100

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 55.1 bits (133), Expect = 3e-08
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 13/89 (14%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN-EVTLIARLQHR 529
             ++     +G G FG VY+  L + G+ +A+K++ +      + FKN E+ ++ +L H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHC 107

Query: 530 NLVKLLGCCIQADESM------LIYEYMP 552
           N+V+L      + E        L+ +Y+P
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 53.7 bits (130), Expect = 5e-08
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 14/87 (16%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLIA 524
           + +    K+GEG +G VYK     G+  A+K++       +E+           E++++ 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55

Query: 525 RLQHRNLVKLLGCCIQADESMLIYEYM 551
            L+H N+VKL          +L++E++
Sbjct: 56  ELKHSNIVKLYDVIHTKKRLVLVFEHL 82

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 53.7 bits (130), Expect = 5e-08
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 15/88 (17%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLI 523
           +NF    K+GEG +G VYK    + G+ +A+K++       ++            E++L+
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYM 551
             L H N+VKLL      ++  L++E++
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL 84

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 5e-08
 Identities = 47/396 (11%), Positives = 113/396 (28%), Gaps = 101/396 (25%)

Query: 25  QSIRDGETLVSVNGTFELGFFSPGTS-----AKRYLGIWYKRVSPRTVAW--VANRETPL 77
             +R  + ++ ++G   LG    G +           +  +      + W  + N  +P 
Sbjct: 145 LELRPAKNVL-IDGV--LGS---GKTWVALDVCLSYKV--QCKMDFKIFWLNLKNCNSPE 196

Query: 78  TD----QSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGN--LVLTDGNYN 131
           T     Q  L  +        D    I    ++       +++     N  LVL     N
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-LNVQN 255

Query: 132 SLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWK----SINDPAPG----E----FSL 179
           +  W +F+  C  LL      R  K   D  LS+      S++  +      E       
Sbjct: 256 AKAWNAFNLSCKILL----TTRF-KQVTDF-LSAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 180 WIDT----------HGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLC------- 222
           ++D              P+ +      ++    +W+         L   +          
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 223 DYKFVINENEVYYEC-----DAKGPA--VSRLWVNQSGLVLRSIWSS-------QQDVWF 268
           +Y+      +++         A  P   +S +W +     +  + +        ++    
Sbjct: 370 EYR------KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Query: 269 LAYYAP---LD-RCDLYSVCGANARCTTN-SSRRCDCLEGFVPKSPNNWS--------EG 315
                P   L+ +  L +    +     + +  +    +  +P   + +         + 
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483

Query: 316 CVRERELKCRNGDEFPK------YVKLKLPDTSSSW 345
                 +       F        +++ K+   S++W
Sbjct: 484 IEHPERM-----TLFRMVFLDFRFLEQKIRHDSTAW 514

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 49/303 (16%), Positives = 80/303 (26%), Gaps = 101/303 (33%)

Query: 94  LDGRDRIFW---SSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMK 150
           + G  R+FW   S    +     V + ++    VL   NY   L            P M 
Sbjct: 61  VSGTLRLFWTLLSKQEEM-----VQKFVEE---VLRI-NYK-FLMSPIKTEQRQ--PSMM 108

Query: 151 LGRNFKTGMDR-----------HLSSWKSIN---------DPAPGEFSLWIDTHGFP--- 187
             R +    DR           ++S  +             PA       +   G     
Sbjct: 109 T-RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK-----NVLIDGVLGSG 162

Query: 188 -----QLVLRKGSVLQYRAGS--WNGLGFTGTPP--LKENVPLCDYKFVINENE------ 232
                  V     V         W  L    +P   L+    L  Y+   N         
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-YQIDPNWTSRSDHSS 221

Query: 233 -VYYECDAKGPAVSRLWVNQSG----LVLRSIWSSQQDVW--FLAYYAPLDRCDLYSVCG 285
            +     +    + RL  ++      LVL ++ +++   W  F                 
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK--AWNAF----------------- 262

Query: 286 ANARC----TTNSSRRCDCLEGFVPKSP--NNWSEGCVRERELKCRNGDEFPKYVKLK-- 337
            N  C    TT   +  D L          ++ S   +   E+K        KY+  +  
Sbjct: 263 -NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVK----SLLLKYLDCRPQ 316

Query: 338 -LP 339
            LP
Sbjct: 317 DLP 319

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 6e-04
 Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 72/307 (23%)

Query: 306 PKSPNNWSEGCVRERELKCRNGDEFPKY--------VKLKLPDTSSSWFNASMNLKECSE 357
            + P+  +   + +R+    +   F KY        +KL+          A + L+    
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR---------QALLELRPAKN 152

Query: 358 L-------CSKNC-SCTAYANSDVERGGSGCLLWFGDLMDMKEYNDGG------QDLYIR 403
           +         K   +     +  V+      + W    +++K  N         Q L  +
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW----LNLKNCNSPETVLEMLQKLLYQ 208

Query: 404 IASERGRSVTKKQVGIIIASVLLMAMFIVASLFCIWRKKLKKQGLTKMSHMKEDMELWE- 462
           I                 +++ L    I A L  + + K  +  L  + +++ + + W  
Sbjct: 209 IDPN------WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ-NAKAWNA 261

Query: 463 FDF----------ASIAKATDNFASYNKLGE---GGFGPVY-KGTLVEGQEIAVKRLSKG 508
           F+             +        + +   +       P   K  L++  +   + L + 
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 509 SGQGM--------EEFKNEVTLIARLQHRNLVKL---LGCCIQADESMLIYEYMPNKSLD 557
                        E  ++ +      +H N  KL   +   +   E     +        
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF----DR 377

Query: 558 FFIFDID 564
             +F   
Sbjct: 378 LSVFPPS 384

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 53.6 bits (129), Expect = 6e-08
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGC 537
            L EGGF  VY+   +  G+E A+KRL     +       EV  + +L  H N+V+    
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 538 CIQADESM 545
                E  
Sbjct: 95  ASIGKEES 102

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 54.3 bits (131), Expect = 6e-08
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 13/114 (11%)

Query: 444 KKQGLTKMSHMKEDMELWEFDFASIAKATDNFASY----NKLGEGGFGPVYKGTLVE-GQ 498
            ++ L     ++    ++      I     + +       KLG G +G V          
Sbjct: 10  GRENLYFQGDLQATPGMF------ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHV 63

Query: 499 EIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY 550
           E A+K + K   S     +   EV ++  L H N++KL           L+ E 
Sbjct: 64  ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 53.1 bits (126), Expect = 6e-08
 Identities = 40/262 (15%), Positives = 72/262 (27%), Gaps = 35/262 (13%)

Query: 14  ASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSA--KRYLGIWYKRVSPRTVAWVA 71
                  +   Q++  G+ L+S N  F+L     G          +W         + + 
Sbjct: 10  NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDGNLVIQDNGATVWVANEQQPFSSTIP 69

Query: 72  NRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSI-----TMKNPVVQLMDSGNLVLT 126
            R      ++ L      G  L D   R  W ++ S            + L D GN+V  
Sbjct: 70  LR----NKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIV-L 124

Query: 127 DGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGF 186
             +                +  + L    +        +         G   L     G 
Sbjct: 125 VDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVVYGA---------GASKLVFQGDGN 175

Query: 187 PQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVI--NENEVYYECDAKGPAV 244
                  G+       +WN    T        V   D   V+    N V +     G A 
Sbjct: 176 LVAYGPNGAA------TWN--AGTQGKGAVRAVFQGDGNLVVYGAGNAVLWHSHTGGHAS 227

Query: 245 SRLWVNQSG-LVL---RSIWSS 262
           + L +  +G + +   + +W+ 
Sbjct: 228 AVLRLQANGSIAILDEKPVWAR 249

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 49.9 bits (119), Expect = 7e-08
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 18/121 (14%)

Query: 18  NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPL 77
           ++ +   +++  GE L   NG +                + Y         W  N  T  
Sbjct: 1   DNILYSGETLSPGEFLN--NGRYVFIMQEDCNL------VLYDV---DKPIWATN--TGG 47

Query: 78  TDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQ 136
            D+   L++ S G +V+   R+   W+SNT     N V  L    N+V+    Y +  W 
Sbjct: 48  LDRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVI----YGTARWA 103

Query: 137 S 137
           +
Sbjct: 104 T 104

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 52.9 bits (128), Expect = 7e-08
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEE-FKNEVTLIARLQHRNLVKLLG 536
           LG+G F  VY+   +  G E+A+K + K +    GM +  +NEV +  +L+H ++++L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 537 CCIQADESM--LIYEYMPNKSL 556
                D +   L+ E   N  +
Sbjct: 79  YF--EDSNYVYLVLEMCHNGEM 98

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 53.4 bits (129), Expect = 8e-08
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
            LG G FG V++       +    K +    G      K E++++   +HRN++ L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 539 IQADESMLIYEYM 551
              +E ++I+E++
Sbjct: 71  ESMEELVMIFEFI 83

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 53.0 bits (128), Expect = 9e-08
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 3/94 (3%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFK 517
              +        + +     LG+G FG V K       QE AVK ++K     +      
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 518 NEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
            EV L+ +L H N++KL      +    ++ E  
Sbjct: 70  REVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 52.9 bits (128), Expect = 9e-08
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLI 523
             +    K+GEG +G V+K       + +A+KR+       +++           E+ L+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYM 551
             L+H+N+V+L        +  L++E+ 
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFC 83

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHR 529
           +++     +G G +G   K     +G+ +  K L  G  +    +   +EV L+  L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 530 NLVKLLGCCIQADESML--IYEYMPNKSLDFFI 560
           N+V+     I    + L  + EY     L   I
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 53.0 bits (128), Expect = 1e-07
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 12/89 (13%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN--------EVTLI 523
             +   + LGEG F  VYK       Q +A+K++  G      E K+        E+ L+
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH---RSEAKDGINRTALREIKLL 66

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYMP 552
             L H N++ LL          L++++M 
Sbjct: 67  QELSHPNIIGLLDAFGHKSNISLVFDFME 95

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 469 AKATDNFASY----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLI 523
                +   Y    N +G G +G V            A K++ K   + ++ FK E+ ++
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYM 551
             L H N+++L        +  L+ E  
Sbjct: 61  KSLDHPNIIRLYETFEDNTDIYLVMELC 88

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.0 bits (127), Expect = 1e-07
 Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 7/113 (6%)

Query: 451 MSHMK--EDMELWEFDFASIAKATDNFASYNKLGEG--GFGPVYKGTLVE-GQEIAVKR- 504
           M+H        L+    +S       +     +G+G      V        G+ + V+R 
Sbjct: 1   MAHHHHHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI 60

Query: 505 -LSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
            L   S + +   + E+ +     H N+V      I  +E  ++  +M   S 
Sbjct: 61  NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSA 113

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVK-----RLSKGSGQGMEEFKNEVTLIARLQHRNLVK 533
            +G+G F  V +    E GQ+ AVK     + +   G   E+ K E ++   L+H ++V+
Sbjct: 31  VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90

Query: 534 LLGCCIQADESMLIYEYM 551
           LL          +++E+M
Sbjct: 91  LLETYSSDGMLYMVFEFM 108

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSK--GSGQGMEEFKNEVTLIARLQH 528
           +DN+    +LG+G F  V +      G E A K ++    S +  ++ + E  +  +LQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 529 RNLVKLLGCCIQADESMLIYEYM 551
            N+V+L     +     L+++ +
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLV 87

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKR--LSKGSGQGMEEFKNEVTLIARL-Q 527
           T  F    K+G G FG V+K    ++G   A+KR           +    EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 528 HRNLVKLLGCCIQADESMLIY-EYMPNKSLDFFI 560
           H ++V+      + D+ MLI  EY    SL   I
Sbjct: 70  HSHVVRYFSAWAE-DDHMLIQNEYCNGGSLADAI 102

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVKLLGC 537
           KLG G FG V+       G E  +K ++K   Q   E  + E+ ++  L H N++K+   
Sbjct: 29  KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88

Query: 538 CIQADESMLIYEYM 551
                   ++ E  
Sbjct: 89  FEDYHNMYIVMETC 102

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 15/88 (17%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKN--------EVTLI 523
           D +    KLGEG +G VYK    V  + +A+KR+       +E  +         EV+L+
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLL 87

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYM 551
             LQHRN+++L           LI+EY 
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEYA 115

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 52.8 bits (127), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 468 IAKATDNFASY----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSK---GSGQGMEEFKNE 519
           +  +T  F+        LG+G FG V        GQE AVK +SK         E    E
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76

Query: 520 VTLIARLQHRNLVKLLGCCIQADESMLIYEY 550
           V L+ +L H N++KL           L+ E 
Sbjct: 77  VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 107

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 468 IAKATDNFASY----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSK--GSGQGMEEFKNEV 520
           +  A+  F+       +LG+G F  V +      G E A K ++    S +  ++ + E 
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
            +  +LQH N+V+L     +     L+++ +
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLV 110

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCC 538
           LGEG    V     L+  QE AVK + K  G        EV ++ + Q HRN+++L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80

Query: 539 IQADESMLIYEYM 551
            + D   L++E M
Sbjct: 81  EEEDRFYLVFEKM 93

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVK-----RLS 506
           H     E   F   S+ +    +     +G+G +G V      +     A+K     ++ 
Sbjct: 6   HHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR 65

Query: 507 KGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSL 556
           + + + +E  K EV L+ +L H N+ +L           L+ E      L
Sbjct: 66  QINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHL 115

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.8 bits (126), Expect = 3e-07
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 470 KATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQ 527
           +    +    +LG GGFG V +    + G+++A+K+  +       E +  E+ ++ +L 
Sbjct: 11  QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70

Query: 528 HRNLVKLL------GCCIQADESMLIYEYMPNKSLDFFI 560
           H N+V               D  +L  EY     L  ++
Sbjct: 71  HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQG 512
            +++D    E     + K   +F   + LG G  G +    + + +++AVKR+     + 
Sbjct: 6   SLEQDDGDEETSVVIVGK--ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP---EC 60

Query: 513 MEEFKNEVTLIARL-QHRNLVKLLGC 537
                 EV L+    +H N+++    
Sbjct: 61  FSFADREVQLLRESDEHPNVIRYFCT 86

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 51.0 bits (123), Expect = 4e-07
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
            LG G F  V+       G+  A+K + K         +NE+ ++ +++H N+V L  
Sbjct: 16  VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.0 bits (123), Expect = 5e-07
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN--------EVTLI 523
           + +    K+GEG +G V+K    + GQ +A+K+          E           E+ ++
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF------LESEDDPVIKKIALREIRML 56

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYM 551
            +L+H NLV LL    +     L++EY 
Sbjct: 57  KQLKHPNLVNLLEVFRRKRRLHLVFEYC 84

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 50.7 bits (122), Expect = 6e-07
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 12/97 (12%)

Query: 466 ASIAKATDNFASY----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSK------GSGQGME 514
            ++ +  +N   Y     +LG G F  V K      G + A K + K        G   E
Sbjct: 1   GTVFR-QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 515 EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM 551
           + + EV+++  +QH N++ L        + +LI E +
Sbjct: 60  DIEREVSILKEIQHPNVITLHEVYENKTDVILILELV 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSK------GSGQGMEEFKNEVTLIARLQHRNLV 532
           +LG G F  V K      G E A K + K        G   EE + EV+++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78

Query: 533 KLLGCCIQADESMLIYEYM 551
            L        + +LI E +
Sbjct: 79  TLHDVYENRTDVVLILELV 97

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 2/96 (2%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLS-KGSGQGMEEFKNEVTLIARLQHRN 530
            +F     +G GGFG V++    V+    A+KR+         E+   EV  +A+L+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
           +V+     ++        E       D        +
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSS 101

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 15/88 (17%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN--------EVTLI 523
           + + +   +GEG +G V K    + G+ +A+K+          +           E+ L+
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL------ESDDDKMVKKIAMREIKLL 78

Query: 524 ARLQHRNLVKLLGCCIQADESMLIYEYM 551
            +L+H NLV LL  C +     L++E++
Sbjct: 79  KQLRHENLVNLLEVCKKKKRWYLVFEFV 106

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSK------GSGQGMEEFKNEVTLIARLQHRNLV 532
           +LG G F  V K      G+E A K + K        G   EE + EV ++  ++H N++
Sbjct: 12  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71

Query: 533 KLLGCCIQADESMLIYEYM 551
            L        + +LI E +
Sbjct: 72  TLHDIFENKTDVVLILELV 90

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 26/133 (19%)

Query: 17  ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETP 76
             + +   Q++     L   NG F+L       +   Y G W      ++      R+  
Sbjct: 2   GTNYLLSGQTLDTEGHLK--NGDFDLVMQDDC-NLVLYNGNW------QSNTANNGRDCK 52

Query: 77  LTDQS-GLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLW 135
           LT    G L       V+ +G     W S       N    +   G LV+    +   ++
Sbjct: 53  LTLTDYGEL-------VIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVV----FGPSVF 101

Query: 136 QSFDHPCDTLLPG 148
           +      D  + G
Sbjct: 102 KI-----DPWVRG 109

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSK------GSGQGMEEFKNEVTLIA 524
            D +    +LG G F  V K      G E A K + K        G   EE + EV+++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 525 RLQHRNLVKLLGCCIQADESMLIYEYM 551
           ++ H N++ L        + +LI E +
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELV 97

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSK--GSGQGMEEFKNEVTLIARLQH 528
           T+ +  + +LG+G F  V +   V  GQE A   ++    S +  ++ + E  +   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 529 RNLVKLLGCCIQADESMLIYEYM 551
            N+V+L     +     LI++ +
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLV 92

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 471 ATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKN-----EVTLIA 524
           ++  F    KLG G +  VYKG     G  +A+K +   S +G           E++L+ 
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT----PSTAIREISLMK 58

Query: 525 RLQHRNLVKLLGCCIQADESMLIYEYM 551
            L+H N+V+L       ++  L++E+M
Sbjct: 59  ELKHENIVRLYDVIHTENKLTLVFEFM 85

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 4/62 (6%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSK---GSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
           L  G    V+    VE  ++ A+K  +     S   +E         ARL   +  +   
Sbjct: 70  LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARD 129

Query: 537 CC 538
             
Sbjct: 130 RR 131

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNL 531
           +   S   LG G  G V      +G+ +AVKR+        +    E+ L+     H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNV 71

Query: 532 VKL 534
           ++ 
Sbjct: 72  IRY 74

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEE-FKNEVTLIARLQH 528
           ++F     LG+G FG VY     +    +A+K L K      G+E   + EV + + L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 529 RNLVKLLGCCIQADES--MLIYEYMPNKSL 556
            N+++L G     D +   LI EY P  ++
Sbjct: 69  PNILRLYGYF--HDATRVYLILEYAPLGTV 96

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 7/73 (9%)

Query: 66  TVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLV 124
              W  N  T          +   G +V++   +   W S  +    + V+ L    N+V
Sbjct: 49  NPIWATN--TGGLGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVV 106

Query: 125 LTDGNYNSLLWQS 137
           +    Y   LW +
Sbjct: 107 I----YGDALWAT 115

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 17  ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETP 76
            N+ +   Q +     L +     +L                   +      W +N  T 
Sbjct: 5   TNNLLFSGQVLYGDGRLTA--KNHQLVMQGDCNLV----------LYGGKYGWQSN--TH 50

Query: 77  LTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLW 135
              +   L +  KG +++ D   +  WSS +S      V+ L D G  V+    Y   ++
Sbjct: 51  GNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVI----YGPAIF 106

Query: 136 QS 137
           ++
Sbjct: 107 ET 108

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 18/101 (17%)

Query: 468 IAKATDNFASY----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSK-------------GS 509
           + K             KLG G +G V          E A+K + K               
Sbjct: 27  VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86

Query: 510 GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY 550
            +  EE  NE++L+  L H N++KL           L+ E+
Sbjct: 87  EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEF 127

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 29/118 (24%)

Query: 451 MSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEI-AVKRLSKGS 509
           M+   + +E    D          +    K+G+G FG V+K    +  +  A+K++    
Sbjct: 1   MAKQYDSVECPFCDEV------SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL--- 51

Query: 510 GQGMEEFKN--------EVTLIARLQHRNLVKLLGCCIQADESM--------LIYEYM 551
              ME  K         E+ ++  L+H N+V L+  C               L++++ 
Sbjct: 52  ---MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN-----EVTLIARL 526
           + +   +KLGEG +  VYKG        +A+K +     +G           EV+L+  L
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA----PCTAIREVSLLKDL 57

Query: 527 QHRNLVKLLGCCIQADESMLIYEYM 551
           +H N+V L           L++EY+
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYL 82

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 10/82 (12%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSK--------GSGQGMEEFKNEVTLIARLQHRN 530
            LG G  G V      +  +++A++ +SK                 + E+ ++ +L H  
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201

Query: 531 LVKLLGCCIQADESMLIYEYMP 552
           ++K+      A++  ++ E M 
Sbjct: 202 IIKIKN-FFDAEDYYIVLELME 222

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 16/122 (13%)

Query: 17  ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETP 76
             + +  SQ + D   L +    + L              +  K  S   + W +   T 
Sbjct: 5   VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCNL------VLTKG-SKTNIVWESG--TS 53

Query: 77  LTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLW 135
              Q   + +   G + + D R    + SNT     + V+ L  +G  V+    Y   +W
Sbjct: 54  GRGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVV----YGPAVW 109

Query: 136 QS 137
            +
Sbjct: 110 ST 111

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE--------FKNEVTL 522
            D +     LG G  G V      +  +++A+K +SK                 + E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 523 IARLQHRNLVKLLGCCIQADESMLIYEYMP 552
           + +L H  ++K+      A++  ++ E M 
Sbjct: 69  LKKLNHPCIIKIKN-FFDAEDYYIVLELME 97

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 473 DNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARL-QH 528
            +F   ++LG G +G V+K     +G+  AVKR        +       EV    ++ QH
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 529 RNLVKLLGCCIQADESMLIY-EY 550
              V+L     +    + +  E 
Sbjct: 117 PCCVRLEQ-AWEEGGILYLQTEL 138

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 9/93 (9%)

Query: 468 IAKATDNFASY-----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSK--GSGQGMEEFKNE 519
             ++ +NF ++      +LG G F  V +      GQE A K L K         E  +E
Sbjct: 19  YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHE 78

Query: 520 VTLIARLQHR-NLVKLLGCCIQADESMLIYEYM 551
           + ++   +    ++ L        E +LI EY 
Sbjct: 79  IAVLELAKSCPRVINLHEVYENTSEIILILEYA 111

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEE-FKNEVTLIARLQHRNLVKLLG 536
           LG+G FG VY     +    +A+K L K     +G+E   + E+ + + L+H N++++  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81

Query: 537 CCIQADESM--LIYEYMPNKSL 556
                D     L+ E+ P   L
Sbjct: 82  YF--HDRKRIYLMLEFAPRGEL 101

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 480 KLGEGGFGPVYKG---TLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
           K+G G +G VYK       + ++ A+K++ +G+G  M   + E+ L+  L+H N++ L  
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQI-EGTGISMSACR-EIALLRELKHPNVISLQK 85

Query: 537 CCIQADES--MLIYEYM 551
             +   +    L+++Y 
Sbjct: 86  VFLSHADRKVWLLFDYA 102

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 17/95 (17%)

Query: 470 KATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN----EVTLIA 524
           K  D F      G+G FG V  G     G  +A+K++ +        F+N     +  +A
Sbjct: 20  KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLA 74

Query: 525 RLQHRNLVKLLGCCIQADES-------MLIYEYMP 552
            L H N+V+L        E         ++ EY+P
Sbjct: 75  VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.5 bits (105), Expect = 8e-05
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 480 KLGEGGFGPVYKG--TLVEGQEIAVKRL-SKGSGQGMEEFKNEVTLIARLQHRNLVK 533
            +  GG G +Y      V G+ + +K L   G  +       E   +A + H ++V+
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLG 536
            LG G  G V +       ++ A+K L         + + EV L  R  Q  ++V+++ 
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVD 78

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 7/59 (11%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLG 536
            LG G  G V +       ++ A+K L         + + EV L  R     ++V+++ 
Sbjct: 69  VLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVD 122

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 24/100 (24%)

Query: 470 KATDNFASYNKLGEGGFGPVYKG--TLVEGQEIAVKRLSKGSGQGMEEFKN--------E 519
           +A   +    ++GEG +G V+K       G+ +A+KR+       ++  +         E
Sbjct: 8   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR------VQTGEEGMPLSTIRE 61

Query: 520 VTLIARLQ---HRNLVKLLGCCIQADES-----MLIYEYM 551
           V ++  L+   H N+V+L   C  +         L++E++
Sbjct: 62  VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
           +LG G    VY+       +  A+K L K   +  +  + E+ ++ RL H N++KL  
Sbjct: 60  ELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKE 115

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 15/82 (18%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVKLLGCC 538
           LGEG +G V      V  + +AVK +         E  K E+ +   L H N+VK     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF---- 70

Query: 539 IQADESMLIYEYMPNKSLDFFI 560
                    Y +    ++ +  
Sbjct: 71  ---------YGHRREGNIQYLF 83

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSKGS----GQGMEEFKNEVTLIARLQHRNLVKLL 535
           LGEG +G V +          AVK L K        G    K E+ L+ RL+H+N+++L+
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 536 GCCIQADESM--LIYEYMPNKSLDFF 559
                 ++    ++ EY      +  
Sbjct: 73  DVLYNEEKQKMYMVMEYCVCGMQEML 98

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH 528
           LG+       + T    G+   V             +++ K EV  +  L+ 
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHRNLVKL 534
           LGEG +G V      V  + +AVK +         E  K E+ +   L H N+VK 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGC 537
            LGEG F    K       Q  AVK +SK   +     + E+T +   + H N+VKL   
Sbjct: 18  PLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEV 74

Query: 538 CIQADESMLIYEYM 551
                 + L+ E +
Sbjct: 75  FHDQLHTFLVMELL 88

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 441 KKLKKQGLTKMSHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQE 499
           KKL++  L +    + +  L +       K  D F   ++LG G  G V+K +    G  
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQKVGELKDDD-FEKISELGAGNGGVVFKVSHKPSGLV 60

Query: 500 IAVKRLS-KGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLD 557
           +A K +  +       +   E+ ++       +V   G      E  +  E+M   SLD
Sbjct: 61  MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 119

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHR 529
           TD +     +G G +    +        E AVK + K       +   E+ ++ R  QH 
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK----SKRDPTEEIEILLRYGQHP 76

Query: 530 NLVKLLGCCIQADESMLIYEYM 551
           N++ L           ++ E M
Sbjct: 77  NIITLKDVYDDGKYVYVVTELM 98

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 42.6 bits (99), Expect = 3e-04
 Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 18/86 (20%)

Query: 471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRL--------SKGSGQGMEEFKNEVTL 522
            T+      K+GEG FG V++    +   +A+K +        +    +  EE   E+ +
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 523 IARLQ---------HRNLVKLLGCCI 539
              L              + L     
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHC 102

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQG--------MEEFKNEVTLIARL-QHR 529
            +G G    V +      G E AVK +   + +          E  + E  ++ ++  H 
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160

Query: 530 NLVKLLGCCIQADESMLIYEYMP 552
           +++ L+     +    L+++ M 
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMR 183

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 14/96 (14%)

Query: 470 KATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQ-GMEEFKN----EVTLI 523
            AT  +    ++G G +G VYK      G  +A+K +   +G  G          EV L+
Sbjct: 6   MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65

Query: 524 ARLQ---HRNLVKLLGCCIQADES-----MLIYEYM 551
            RL+   H N+V+L+  C  +         L++E++
Sbjct: 66  RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 101

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLG 536
            LG G  G V +      GQ+ A+K L         + + EV    +     ++V +L 
Sbjct: 36  VLGLGVNGKVLECFHRRTGQKCALKLLYD-----SPKARQEVDHHWQASGGPHIVCILD 89

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 41.1 bits (95), Expect = 4e-04
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 5/70 (7%)

Query: 69  WVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTD 127
            V +  T          +   G + +L  ++   W+S  S +    V  L    NL +  
Sbjct: 170 RVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAI-- 227

Query: 128 GNYNSLLWQS 137
             Y   LW +
Sbjct: 228 --YGGALWTT 235

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSK------GSGQGMEEFKNEVTLIARLQHR--NL 531
           LG GGFG VY G  + +   +A+K + K      G          EV L+ ++      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 532 VKLLGCCIQADESMLIYEY 550
           ++LL    + D  +LI E 
Sbjct: 111 IRLLDWFERPDSFVLILER 129

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 41.3 bits (97), Expect = 6e-04
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKN-EVTLIARLQHR 529
           +  ++    LG G FG V +   +E G+  A+K++ +        +KN E+ ++  L H 
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHV 60

Query: 530 NLVKLLGC 537
           N++KL+  
Sbjct: 61  NIIKLVDY 68

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 15/98 (15%)

Query: 470 KATDNFASY----NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGM---------EE 515
            +T  F         LG G    V +       +E AVK +    G            E 
Sbjct: 10  HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69

Query: 516 FKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMP 552
              EV ++ ++  H N+++L           L+++ M 
Sbjct: 70  TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK 107

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 41.3 bits (97), Expect = 8e-04
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 17/84 (20%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSK---GSGQGMEEFKNEVTLIARLQHRNLVKLLG 536
           LG G FG V  G   + G ++AVK L++    S   + + + E+  +   +H +++KL  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL-- 81

Query: 537 CCIQADESMLIYEYMPNKSLDFFI 560
                      Y+ +   S  F +
Sbjct: 82  -----------YQVISTPSDIFMV 94

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 481 LGEGGFGPVYKGT-LVEGQEIAVKRLSK------GSGQGMEEFKNEVTLIARL----QHR 529
           LG+GGFG V+ G  L +  ++A+K + +                 EV L+ ++     H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98

Query: 530 NLVKLL 535
            +++LL
Sbjct: 99  GVIRLL 104

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRL-SKGSGQGMEEFKNEVTLIARL-QHR 529
           ++     ++G G +G V K      GQ +AVKR+ S    +  ++   ++ ++ R     
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
            +V+  G   +  +  +  E M + S D F 
Sbjct: 82  YIVQFYGALFREGDCWICMELM-STSFDKFY 111

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	579
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.83
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.83
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.82
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.79
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.78
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.72
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.66
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.66
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.66
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.65
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.63
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.63
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.61
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.59
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.56
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.55
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.53
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.5
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.48
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.48
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.47
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.46
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.43
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.43
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.4
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.4
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.37
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.36
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.34
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.34
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.34
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.31
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.3
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.28
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.24
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.21
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.19
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.19
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.17
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.17
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.16
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.16
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.12
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.12
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.11
3uqc_A	286	Probable conserved transmembrane protein; structur	99.11
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.1
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.1
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.1
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.1
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.1
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.1
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.1
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.1
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.1
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.1
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.09
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.04
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.04
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.03
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.03
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.03
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.03
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.03
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.03
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.03
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.03
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.02
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.02
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.02
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.02
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.02
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.02
3bhy_A	283	Death-associated protein kinase 3; death associate	99.01
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.01
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.01
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.0
3niz_A	311	Rhodanese family protein; structural genomics, str	99.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.99
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.99
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.99
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.99
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.99
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.98
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.98
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.98
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.98
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.98
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.98
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.94
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.94
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.94
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.93
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.93
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.93
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.93
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.92
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.92
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.92
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.92
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.92
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.91
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.91
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.91
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.91
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.9
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.9
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.9
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.9
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.89
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.89
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.89
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.88
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.88
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.88
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.87
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.87
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.86
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.86
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.86
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.86
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.85
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.85
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.85
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.84
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.84
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	98.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.83
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.83
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.83
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.83
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.83
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.82
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.81
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.81
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.8
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.79
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.78
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.78
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.78
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.78
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.77
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.76
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.76
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.75
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.75
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.75
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.75
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.74
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.74
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.74
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.74
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.74
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.73
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.73
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.73
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.72
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.71
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.71
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.7
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.7
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.7
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.69
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.69
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.69
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.68
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.68
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.68
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.67
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.66
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.65
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.64
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.63
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.63
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.62
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.61
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.61
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.58
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.57
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.56
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.56
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.54
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.52
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.52
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.51
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.51
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.5
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.49
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.47
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.47
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.42
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.4
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.12
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.75
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.56
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.4
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.8
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.79
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.55
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.84
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	90.62
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	86.98
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	86.78
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	84.49
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	84.26
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	81.09

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=2.1e-44  Score=356.94  Aligned_cols=232  Identities=20%  Similarity=0.231  Sum_probs=179.3

Q ss_pred             hcccccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCC----cceEEEecC
Q 008046           14 ASAANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQ----SGLLNVTSK   89 (579)
Q Consensus        14 ~~~~~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~----~~~l~~~~~   89 (579)
                      ++++.|+|++|++|++|++|+|++|.|+||||+++   +.||   |+  +.+ +||+||||+|+.++    +++|.|+.+
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~   80 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFY   80 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCC
Confidence            46778999999999999999999999999999543   5666   76  677 99999999999874    688999999


Q ss_pred             C-eEE--EcCCCcEEEeecCCCC-----CCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCce
Q 008046           90 G-IVL--LDGRDRIFWSSNTSIT-----MKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDR  161 (579)
Q Consensus        90 G-L~l--~~~~~~~~Wst~~~~~-----~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~~  161 (579)
                      | |+|  .|++|.+||+++++..     ..++.|+|+|+|||||+|   +.+||||  ||||||||||+|+.+..+|+. 
T Consensus        81 G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~---~~~lWqS--~ptdtlLpg~~~~~~l~~g~~-  154 (276)
T 3m7h_A           81 VQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD---SLALWNG--TPAIPLVPGAIDSLLLAPGSE-  154 (276)
T ss_dssp             ESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE---EEEEEES--CTTSCCCCSCTTCEEECSSEE-
T ss_pred             CcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC---CceeeCc--ccccccccccccccccccCcc-
Confidence            9 999  7888999999997531     235789999999999998   5799999  999999999999988888764 


Q ss_pred             EEEeccCCCCCCCcceEEeecCCCCcEEEEEc-CCeeeeecCCCCCCccccCCCCCCCCcceeeEEEEcCC-eEEEEEEe
Q 008046          162 HLSSWKSINDPAPGEFSLWIDTHGFPQLVLRK-GSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINEN-EVYYECDA  239 (579)
Q Consensus       162 ~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~-~~~~y~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  239 (579)
                       |   ++.+||++|.|+++||++|.  +++++ +...||++|+|++...    .+. ......+.+.++++ ..++++..
T Consensus       155 -L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~----~l~-l~~dGnLvl~d~~~~~vWsS~t~  223 (276)
T 3m7h_A          155 -L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAV----RAV-FQGDGNLVVYGAGNAVLWHSHTG  223 (276)
T ss_dssp             -E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCC----EEE-ECTTSCEEEECTTSCEEEECSCT
T ss_pred             -c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccE----EEE-EcCCCeEEEEeCCCcEEEEecCC
Confidence             6   56789999999999999995  44555 4689999999875321    111 11112333444433 33333222


Q ss_pred             CCCceEEEEECCCCcEEEEEEeCCCCcEEEEEeecC
Q 008046          240 KGPAVSRLWVNQSGLVLRSIWSSQQDVWFLAYYAPL  275 (579)
Q Consensus       240 ~~~~~~r~~l~~~G~l~~~~~~~~~~~w~~~~~~~~  275 (579)
                       ....+|++|+.||++++|.|   ...|...+.+|.
T Consensus       224 -~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P~  255 (276)
T 3m7h_A          224 -GHASAVLRLQANGSIAILDE---KPVWARFGFQPT  255 (276)
T ss_dssp             -TCTTCEEEECTTSCEEEEEE---EEEEESSSCCTT
T ss_pred             -CCCCEEEEEcCCccEEEEcC---CCeEEccCccCC
Confidence             12457999999999999998   245666655554

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=7.9e-37  Score=297.79  Aligned_cols=215  Identities=15%  Similarity=0.185  Sum_probs=162.5

Q ss_pred             ccccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEE
Q 008046           16 AANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLL   94 (579)
Q Consensus        16 ~~~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~   94 (579)
                      ++.|+|++|++|++|++|  ++|.|+|||+.+++     +. +|..   +|+||+|||+.|   .++.|.|+++| |||.
T Consensus         6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gn-----l~-ly~~---~~~vW~an~~~~---~~~~l~l~~dGnLvl~   71 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCN-----LV-LFDS---DVRVWASNTAGA---TGCRAVLQSDGLLVIL   71 (236)
T ss_dssp             CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSC-----EE-EEES---SSEEECCCCCSC---SCCBCCBCSSSCBCCB
T ss_pred             eccceeCCCCEECCCCEE--EcCCEEEEECCCCc-----EE-EEEC---CEEEEECCCCCC---CCeEEEEcCCCcEEEE
Confidence            667999999999999999  59999999987664     22 3443   799999999998   45789999999 9999


Q ss_pred             cCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCcc-CCCCeecccc-cCCC-----ceEEEecc
Q 008046           95 DGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTL-LPGMKLGRNF-KTGM-----DRHLSSWK  167 (579)
Q Consensus        95 ~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTl-Lpgq~l~~~~-~tg~-----~~~L~S~~  167 (579)
                      |++|.++|++++........|+|+|+|||||++.    ++||||||||||+ ||||  +.+. .+|+     +++|+   
T Consensus        72 d~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~~----~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~---  142 (236)
T 1dlp_A           72 TAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGP----GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH---  142 (236)
T ss_dssp             CTTTCCSCCCCCCCCSSCCEEEECSSSCEEEECS----EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC---
T ss_pred             cCCCcEEEeCCccccCCcEEEEEeCCCCEEEecC----CEEECCCCCCcccccCCc--cceEEecCCcCCCccceEE---
Confidence            9999999999986433456899999999999952    8999999999777 5554  4443 4444     56786   


Q ss_pred             CCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCCCCCccccCCCCCCCCcceeeEEEEcCC-eEEEEEEeCCCceEE
Q 008046          168 SINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNGLGFTGTPPLKENVPLCDYKFVINEN-EVYYECDAKGPAVSR  246 (579)
Q Consensus       168 s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r  246 (579)
                      +..||++|.|+|.|+++|  +++++++...||++++|++. +...+.+. ...  .+.....++ +.+..+.......+|
T Consensus       143 s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~-~~G--nl~ly~~~~~~vw~s~~~~~~~~~r  216 (236)
T 1dlp_A          143 ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQ-PNG--RMDVLTNQNIAVWTSGNSRSAGRYV  216 (236)
T ss_dssp             SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEE-TTT--EEEEEETTTEEEEECCCCCSSSCCE
T ss_pred             cCcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEEC-CCC--cEEEEeCCCcEEEEeCCCCCCCCEE
Confidence            478999999999999999  67778888899999999653 44444443 111  222223333 444444333334689


Q ss_pred             EEECCCCcEEEEE
Q 008046          247 LWVNQSGLVLRSI  259 (579)
Q Consensus       247 ~~l~~~G~l~~~~  259 (579)
                      ++|++||++++|.
T Consensus       217 l~Ld~dG~l~ly~  229 (236)
T 1dlp_A          217 FVLQPDRNLAIYG  229 (236)
T ss_dssp             EEECSSSCEEEEC
T ss_pred             EEEcCCCcEEEeC
Confidence            9999999999984

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.83  E-value=5.1e-20  Score=158.38  Aligned_cols=107  Identities=16%  Similarity=0.262  Sum_probs=92.5

Q ss_pred             ccccccCCCCccCCCCEEE--ecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eE
Q 008046           16 AANDNITPSQSIRDGETLV--SVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IV   92 (579)
Q Consensus        16 ~~~~~i~~g~~l~~~~~l~--S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~   92 (579)
                      ++.++|.+|++|.+|++|+  |++|.|+|+|+.+++     | +||++   +++||+|||+.|-  .++.+.|.++| ||
T Consensus         6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dgn-----l-vly~~---~~~vW~sn~~~~~--~~~~l~l~~dGNLV   74 (119)
T 1b2p_A            6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCN-----L-VLYDN---NNPIWATNTGGLG--NGCRAVLQPDGVLV   74 (119)
T ss_dssp             CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTSC-----E-EEEET---TEEEEECCCTTSC--SSCEEEECTTSCEE
T ss_pred             ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCCC-----E-EEEEC---CEEEEeCCCccCC--CceEEEEccCCEEE
Confidence            5688999999999999999  999999999998775     2 57875   7999999998772  34789999999 99


Q ss_pred             EEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeee
Q 008046           93 LLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS  137 (579)
Q Consensus        93 l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQS  137 (579)
                      |+|.++.++|++++........++|+|+|||||++    .++|||
T Consensus        75 l~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~----~~~W~S  115 (119)
T 1b2p_A           75 VITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG----DALWAT  115 (119)
T ss_dssp             EECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE----SEEEEC
T ss_pred             EEeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC----ccEeCC
Confidence            99999999999987643446689999999999997    279998

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.83  E-value=6.3e-20  Score=154.08  Aligned_cols=103  Identities=19%  Similarity=0.376  Sum_probs=88.7

Q ss_pred             cccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCC
Q 008046           19 DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGR   97 (579)
Q Consensus        19 ~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~   97 (579)
                      |+|.+||.|.+|++|.|  |.|.|.|...++     |.++.    ..++||+|||+.|... .+.|.++.|| |||.|++
T Consensus         2 n~L~~g~~L~~g~~L~s--g~y~l~~q~DgN-----Lvly~----~~~~vW~ant~~~~~~-~~~L~l~~dGnLvL~d~~   69 (105)
T 4h3o_A            2 NILDNNEGLYAGQSLDV--EPYHFIMQDDCN-----LVLYD----HSTSTWASNTEIGGKS-GCSAVLQSDGNFVVYDSS   69 (105)
T ss_dssp             CEECTTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCCCTTCC-SCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEEcCCCEEEE--CCEEEEECCCCe-----EEEEE----CCEEEEEecCCCCCCc-cEEEEEeCCccEEEECCC
Confidence            68999999999999988  889999987765     55544    4689999999999764 4689999999 9999999


Q ss_pred             CcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeee
Q 008046           98 DRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS  137 (579)
Q Consensus        98 ~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQS  137 (579)
                      +.++|++++........|+|+|+|||||++.    .||||
T Consensus        70 ~~~vWss~t~~~~~~~~l~L~ddGNlVly~~----~~W~S  105 (105)
T 4h3o_A           70 GRSLWASHSTRGSGNYILILQDDGNVIIYGS----DIWST  105 (105)
T ss_dssp             CCEEEECCCCCCSSCEEEEECTTSCEEEEES----EEEEC
T ss_pred             cEEEEEecCCCCCCCEEEEEeCCCeEEEECC----cEecC
Confidence            9999999986545567899999999999963    69998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.82  E-value=1.5e-19  Score=153.48  Aligned_cols=109  Identities=19%  Similarity=0.396  Sum_probs=93.0

Q ss_pred             ccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcC
Q 008046           18 NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDG   96 (579)
Q Consensus        18 ~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~   96 (579)
                      +|+|.+|+.|.+|++|+ ++|.|+|+|+..++     | |+|+   ..++||.||++.|.  ....+.|.++| |||.|.
T Consensus         1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dGn-----l-vl~~---~~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~   68 (110)
T 3a0c_A            1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDCN-----F-VLYD---SGKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQ   68 (110)
T ss_dssp             CCEEETTCEECTTCEEE-ETTTEEEEECTTSC-----E-EEEE---TTEEEEECCCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCCCEEE-ECCCEEEEEcCCCc-----E-EEEE---CCEEEEECCCCCCC--CcEEEEEeCCCCEEEECC
Confidence            47899999999999999 99999999988775     2 6676   37999999998773  34689999999 999999


Q ss_pred             CCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCC
Q 008046           97 RDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPC  142 (579)
Q Consensus        97 ~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PT  142 (579)
                      ++.++|++++........++|+|+|||||++.    .+||||+||.
T Consensus        69 ~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~----~~W~S~~~~~  110 (110)
T 3a0c_A           69 SNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP----VVWATGSGPA  110 (110)
T ss_dssp             TCCEEEECCCCCSSSCCEEEECTTSCEEEECS----EEEECSCCC-
T ss_pred             CCcEEEecCCCCCCCCEEEEEeCCccEEEECC----CEecCCCcCC
Confidence            99999999986444456899999999999962    7999999984

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.79  E-value=5e-19  Score=151.60  Aligned_cols=109  Identities=19%  Similarity=0.359  Sum_probs=91.7

Q ss_pred             ccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcC
Q 008046           18 NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDG   96 (579)
Q Consensus        18 ~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~   96 (579)
                      .|+|.+||+|.+|++|+  +|.|+|+|+..++     | ++|.   ..++||+||++.|.  .++.|.|+++| |||.|.
T Consensus         2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dgn-----l-vly~---~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~   68 (115)
T 2dpf_A            2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCN-----L-VKYQ---NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDH   68 (115)
T ss_dssp             CCEEETTCEEETTEEEE--ETTEEEEECTTSC-----E-EEEE---TTEEEEECSCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCCCEEE--CCCEEEEEcCCCc-----E-EEEe---CCEEEEeCCCCCCC--CceEEEECCCCcEEEECC
Confidence            58999999999999998  7999999987764     2 2454   47899999999884  34789999999 999999


Q ss_pred             CCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCC
Q 008046           97 RDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCD  143 (579)
Q Consensus        97 ~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTD  143 (579)
                      ++.++|++++..+.....++|+|+|||||++.    ++||||.++..
T Consensus        69 ~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~----~~W~S~~~~~~  111 (115)
T 2dpf_A           69 NNNDVWGSACWGDNGKYALVLQKDGRFVIYGP----VLWSLGPNGCR  111 (115)
T ss_dssp             TCCEEEECCCCCSSSCCEEEECTTSCEEEECS----EEECSSTTCBC
T ss_pred             CceEEEEcCCCCCCCCEEEEEeCCCeEEEECC----CEEECCCCCCc
Confidence            88999999876434456899999999999962    79999998765

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.78  E-value=1.6e-18  Score=147.85  Aligned_cols=109  Identities=20%  Similarity=0.435  Sum_probs=91.1

Q ss_pred             ccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcC
Q 008046           18 NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDG   96 (579)
Q Consensus        18 ~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~   96 (579)
                      +|+|.+||+|.+|++|  ++|.|+|+|+.+++     | ++|++   .++||+||++.+  ..++.+.|.++| |||+| 
T Consensus         1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dgn-----l-vl~~~---~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-   66 (112)
T 1xd5_A            1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDCN-----L-VLYDN---NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-   66 (112)
T ss_dssp             CCEEETTEEECTTCEE--EETTEEEEECTTSC-----E-EEEET---TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-
T ss_pred             CCCCCCCCEECCCCEE--eCCCEEEEEcCCCc-----E-EEEEC---CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-
Confidence            5899999999999999  58999999998875     2 45754   689999999764  234789999999 99999 


Q ss_pred             CCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCC
Q 008046           97 RDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHP  141 (579)
Q Consensus        97 ~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~P  141 (579)
                      ++.++|++.+........++|+++|||||++. .+.++||||++.
T Consensus        67 ~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~-~~~~~W~S~~~~  110 (112)
T 1xd5_A           67 GSRAIWASNTNRQNGNYYLILQRDRNVVIYDN-SNNAIWATHTNV  110 (112)
T ss_dssp             TTEEEEECCCCCSCCCCEEEECTTSCEEEECT-TSCEEEECCCCC
T ss_pred             CCEEEEECCccCCCCCEEEEEeCCCcEEEECC-CCceEEECCCcc
Confidence            78899999875434456899999999999984 457899999985

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.72  E-value=2.7e-17  Score=139.26  Aligned_cols=104  Identities=24%  Similarity=0.374  Sum_probs=85.8

Q ss_pred             cccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCC
Q 008046           19 DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGR   97 (579)
Q Consensus        19 ~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~   97 (579)
                      ++|.|||.|.+|+.|+  +|.|+|.|...++     | +.|..   .++||.+|++.+  .....|.|.++| |||.|.+
T Consensus         2 ntL~~gq~L~~g~~L~--~g~~~L~~q~dGn-----L-vly~~---~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~   68 (109)
T 3dzw_A            2 NILYSGETLSPGEFLN--NGRYVFIMQEDCN-----L-VLYDV---DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPR   68 (109)
T ss_dssp             CEEETTEEECTTCEEE--ETTEEEEECTTSC-----E-EEEET---TEEEEECCCTTS--SSSCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEeCCCCEEE--CCCEEEEEcCCCc-----E-EEEeC---CEEEEECCcccC--CCCEEEEEeCCCCEEEECCC
Confidence            5899999999999996  7999999988775     2 23544   589999999876  234789999999 9999998


Q ss_pred             CcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeecc
Q 008046           98 DRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFD  139 (579)
Q Consensus        98 ~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd  139 (579)
                      +.++|++++........|+|+|+|||||++.    .+|||=.
T Consensus        69 ~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~----~~W~s~t  106 (109)
T 3dzw_A           69 NNPIWASNTGGENGNYVCVLQKDRNVVIYGT----ARWATGT  106 (109)
T ss_dssp             SCEEEECCCCCSSSCEEEEECTTSCEEEEES----CCCCCCC
T ss_pred             CCEEEECCCCCCCCCEEEEEeCCCEEEEECC----CEEeCCC
Confidence            9999999986433346799999999999973    7999843

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.66  E-value=1.1e-16  Score=163.14  Aligned_cols=92  Identities=28%  Similarity=0.560  Sum_probs=81.6

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...++||+|+||.||+|.+.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.++.+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            35666689999999999999864      367899999987666667899999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCC
Q 008046          547 IYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~~  564 (579)
                      |||||++|+|.++|....
T Consensus       121 V~Ey~~~G~L~~~l~~~~  138 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHG  138 (329)
T ss_dssp             EEECCTTCBHHHHHHTSS
T ss_pred             EEEcCCCCcHHHHHHhcC
Confidence            999999999999997644

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.66  E-value=3.7e-16  Score=132.29  Aligned_cols=104  Identities=20%  Similarity=0.325  Sum_probs=83.4

Q ss_pred             ccccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEE
Q 008046           16 AANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLL   94 (579)
Q Consensus        16 ~~~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~   94 (579)
                      .++|+|.+||.|..|+.|+|  |.|.|-|...++     |.+ |..    ++||.+|++..  .....+.+.++| |||.
T Consensus         4 ~~~dtL~~gq~L~~g~~L~s--g~~~L~~q~dGn-----Lvl-~~~----~~vW~snt~~~--~~~~~l~l~~dGNLvl~   69 (110)
T 3r0e_B            4 FTNNLLFSGQVLYGDGRLTA--KNHQLVMQGDCN-----LVL-YGG----KYGWQSNTHGN--GEHCFLRLNHKGELIIK   69 (110)
T ss_dssp             CBTTEEETTCEEETTEEEEC--SSCEEEECTTSC-----EEE-ECS----SSCEECCCTTS--SSSCEEEECTTSCEEEE
T ss_pred             cccCEECCCCEecCCCEEEe--CCEEEEEcCCCe-----EEE-ECC----eEEEECCCcCC--CcCEEEEEeCCCcEEEE
Confidence            36899999999999999998  559987755543     433 543    48999999863  234689999999 9999


Q ss_pred             cCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeee
Q 008046           95 DGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS  137 (579)
Q Consensus        95 ~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQS  137 (579)
                      |.++.++|++++........|+|+|+|||||++    ..+|+|
T Consensus        70 d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~----~~~W~t  108 (110)
T 3r0e_B           70 DDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG----PAIFET  108 (110)
T ss_dssp             CTTCCEEEECCCCCSSSCCEEEECTTSCEEEEC----SEEEES
T ss_pred             eCCCCEEEEcCCcCCCCCEEEEEcCCccEEEec----CCEecC
Confidence            999999999998543345789999999999997    379987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.66  E-value=1e-16  Score=161.13  Aligned_cols=106  Identities=32%  Similarity=0.551  Sum_probs=86.0

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...++||+|+||.||+|.+.      ++..||||+++....+..++|.+|+.+|++++|||||+++|+|.++++.+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45667789999999999999864      367899999987666667899999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCC---------CCCcccCccccccc
Q 008046          547 IYEYMPNKSLDFFIFDID---------WNGLMLTRSSKSHI  578 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~~---------~~~~~l~~~~r~~i  578 (579)
                      |||||++|+|.++|....         .....++|..+.+|
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  133 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI  133 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHH
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHH
Confidence            999999999999997532         22334666665543

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.65  E-value=7.1e-16  Score=131.31  Aligned_cols=96  Identities=21%  Similarity=0.367  Sum_probs=76.8

Q ss_pred             CCCCCCcceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecc
Q 008046           75 TPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGR  153 (579)
Q Consensus        75 ~p~~~~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~  153 (579)
                      .|+.+...+|.++.+| |+|.+. +.++|++++........++|+|+|||||++  .+.++||||+              
T Consensus        14 ~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d--~~~~~W~S~~--------------   76 (112)
T 1xd5_A           14 GSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS--GSRAIWASNT--------------   76 (112)
T ss_dssp             CEEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE--TTEEEEECCC--------------
T ss_pred             CEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc--CCEEEEECCc--------------
Confidence            3444455789999999 999987 789999998643345789999999999998  3679999994              


Q ss_pred             cccCCCceEEEeccCCCCCCCcceEEeecCCCCcEEEEEc-CCeeeeecCCCCC
Q 008046          154 NFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRK-GSVLQYRAGSWNG  206 (579)
Q Consensus       154 ~~~tg~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~-~~~~y~~~g~~~~  206 (579)
                                       +|++|.|++.|+++|+  ++++. +..+||++++|+|
T Consensus        77 -----------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 -----------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             -----------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             -----------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence                             3456889999999998  44554 4678999999986

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.63  E-value=2.8e-15  Score=127.60  Aligned_cols=106  Identities=19%  Similarity=0.249  Sum_probs=86.3

Q ss_pred             cccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEc
Q 008046           17 ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLD   95 (579)
Q Consensus        17 ~~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~   95 (579)
                      +.|+|.+||.|..|+.|.+  |.|.|-|...++     |.++..  ...++||.+|+..+-  ....+.|.++| |||.|
T Consensus         5 ~~~tL~~gq~L~~g~~L~~--g~~~L~~q~dGN-----LvL~~~--~~~~~vWssnt~~~~--~~~~l~l~~dGNLVl~d   73 (113)
T 3mez_B            5 VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCN-----LVLTKG--SKTNIVWESGTSGRG--QHCFMRLGHSGELDITD   73 (113)
T ss_dssp             CSSEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEET--TTTEEEEECCCTTSC--SSCEEEECTTSCEEEEC
T ss_pred             cCCEeCCCCEECCCCEeEc--CCEEEEEcCCCE-----EEEEEC--CCCEEEEECCcccCC--cCEEEEEeCCCcEEEEC
Confidence            5789999999999999974  889999976664     445432  146899999998763  34689999999 99999


Q ss_pred             CCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeee
Q 008046           96 GRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS  137 (579)
Q Consensus        96 ~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQS  137 (579)
                      .++.++|++++........|+|+|+|||||++    ..+|+|
T Consensus        74 ~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~----~~~W~s  111 (113)
T 3mez_B           74 DRLNTVFVSNTVGQEGDYVLILQINGQAVVYG----PAVWST  111 (113)
T ss_dssp             TTSCEEEECSCCCSSSCCEEEECTTSCEEEEC----SEEEES
T ss_pred             CCCCEEEECCCcCCCCCEEEEEcCCceEEEec----CCEecC
Confidence            99999999998643345789999999999996    479997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.63  E-value=3.5e-16  Score=157.93  Aligned_cols=89  Identities=38%  Similarity=0.579  Sum_probs=76.2

Q ss_pred             ccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +...++||+|+||.||+|.+.      +++.||||+++... ....++|.+|+.+|++++|||||+++|+|...++.+||
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            344579999999999999863      36789999997543 34467899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      ||||++|+|.++|...
T Consensus       108 ~Ey~~~G~L~~~L~~~  123 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMR  123 (308)
T ss_dssp             EECCSSCBHHHHHHTT
T ss_pred             EEcCCCCcHHHHHHhh
Confidence            9999999999999754

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.61  E-value=4.7e-15  Score=125.64  Aligned_cols=88  Identities=25%  Similarity=0.345  Sum_probs=71.7

Q ss_pred             CcceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCC
Q 008046           80 QSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTG  158 (579)
Q Consensus        80 ~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg  158 (579)
                      ...+|.++.|| |+|.+ .+.+||++++........++|+|+|||||++. .+.++||||.                   
T Consensus        20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~-~~~~~W~S~t-------------------   78 (110)
T 3a0c_A           20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQ-SNRVIWQTKT-------------------   78 (110)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECT-TCCEEEECCC-------------------
T ss_pred             CCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECC-CCcEEEecCC-------------------
Confidence            34779999999 99998 47899999986433456899999999999986 4679999992                   


Q ss_pred             CceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCC
Q 008046          159 MDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSW  204 (579)
Q Consensus       159 ~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~  204 (579)
                                  ++++|.|+++|+++|+  ++++++  .||+++++
T Consensus        79 ------------~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~  108 (110)
T 3a0c_A           79 ------------NGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG  108 (110)
T ss_dssp             ------------CCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred             ------------CCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence                        4567899999999997  445654  79998865

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.59  E-value=8e-15  Score=123.83  Aligned_cols=107  Identities=21%  Similarity=0.388  Sum_probs=86.2

Q ss_pred             cccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEc
Q 008046           17 ANDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLD   95 (579)
Q Consensus        17 ~~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~   95 (579)
                      +.|+|.|||.|..|+.|  .+|.|.|.|...++     | +.|..      +|.+|+..+-  ....|.++++| |+|.|
T Consensus         2 ~~dtL~~gq~L~~g~~L--~~g~~~L~~q~dGN-----L-vl~~~------~Wssnt~~~~--~~~~l~l~~dGnLvl~d   65 (109)
T 3r0e_A            2 GTNYLLSGQTLDTEGHL--KNGDFDLVMQDDCN-----L-VLYNG------NWQSNTANNG--RDCKLTLTDYGELVIKN   65 (109)
T ss_dssp             CCSEEETTCEECTTCEE--EETTEEEEECTTSC-----E-EEETT------TEECCCTTSC--SSCEEEECTTSCEEEEC
T ss_pred             ccCCcCCCCCcCCCCEe--ECCCEEEEEecCCe-----E-EEEeC------eEEcCCCCCC--CcEEEEEcCCCeEEEEe
Confidence            67999999999999999  57999999977664     2 23432      6999987652  34789999999 99999


Q ss_pred             CCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCC
Q 008046           96 GRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPG  148 (579)
Q Consensus        96 ~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpg  148 (579)
                      .++.++|++++.+......|+|+|+|||||++    ..+|+|     .|.+||
T Consensus        66 ~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~----~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           66 GDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG----PSVFKI-----DPWVRG  109 (109)
T ss_dssp             TTSCEEEECCCCCSSSCCEEEEETTTEEEEEC----SEEEEE-----CTTSCC
T ss_pred             CCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe----cCEECC-----CCccCC
Confidence            99999999998643445689999999999996    479998     555554

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.56  E-value=1.8e-14  Score=123.57  Aligned_cols=85  Identities=20%  Similarity=0.253  Sum_probs=69.6

Q ss_pred             ceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCc
Q 008046           82 GLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMD  160 (579)
Q Consensus        82 ~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~  160 (579)
                      ..|.+..+| |+|.+. +.+||++++........++|+|+|||||+|. .+.++||||                      
T Consensus        32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~-~~~~lW~S~----------------------   87 (119)
T 1b2p_A           32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITN-ENVTVWQSP----------------------   87 (119)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-TCCEEEECS----------------------
T ss_pred             EEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeC-CCcEEEcCC----------------------
Confidence            468888999 999987 7899999986433457899999999999986 567999999                      


Q ss_pred             eEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          161 RHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       161 ~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                               ++|++|.|+++|+++|+  +++++  ..||++|+
T Consensus        88 ---------~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           88 ---------VAGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             ---------CCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             ---------CCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence                     34567899999999998  44454  38999875

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.55  E-value=2.9e-14  Score=121.84  Aligned_cols=89  Identities=25%  Similarity=0.371  Sum_probs=72.5

Q ss_pred             cceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCC
Q 008046           81 SGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGM  159 (579)
Q Consensus        81 ~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~  159 (579)
                      ...|.++.+| |+|.+ .+.++|++++........++|+|+|||||+|. ++.++||||++                   
T Consensus        21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~-~~~~vW~S~~~-------------------   79 (115)
T 2dpf_A           21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDH-NNNDVWGSACW-------------------   79 (115)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECT-TCCEEEECCCC-------------------
T ss_pred             CEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECC-CceEEEEcCCC-------------------
Confidence            3668888999 99988 47899999986433456899999999999986 46799999998                   


Q ss_pred             ceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCCCC
Q 008046          160 DRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNG  206 (579)
Q Consensus       160 ~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~~~  206 (579)
                                  +++|.|++.|+++|+  +++++.  .||++++|..
T Consensus        80 ------------~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~~  110 (115)
T 2dpf_A           80 ------------GDNGKYALVLQKDGR--FVIYGP--VLWSLGPNGC  110 (115)
T ss_dssp             ------------CSSSCCEEEECTTSC--EEEECS--EEECSSTTCB
T ss_pred             ------------CCCCCEEEEEeCCCe--EEEECC--CEEECCCCCC
Confidence                        245778999999997  445554  8999999974

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=146.41  Aligned_cols=99  Identities=22%  Similarity=0.385  Sum_probs=79.6

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +++...++||+|+||.||+|++.  ..||||+++..  ..+..++|.+|+.+|++++|||||+++|+|.+ +..+|||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            34556689999999999999875  36999999743  33456789999999999999999999999864 568999999


Q ss_pred             cCCCCHHHHhcCCCCCCcccCcccccc
Q 008046          551 MPNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       551 ~~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      |++|+|.++|...+.   -++|..+.+
T Consensus       113 ~~gGsL~~~l~~~~~---~l~~~~~~~  136 (307)
T 3omv_A          113 CEGSSLYKHLHVQET---KFQMFQLID  136 (307)
T ss_dssp             CSSCBHHHHHHTSCC---CCCHHHHHH
T ss_pred             CCCCCHHHHHhhcCC---CCCHHHHHH
Confidence            999999999975432   255655543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.50  E-value=3.7e-14  Score=144.88  Aligned_cols=91  Identities=22%  Similarity=0.375  Sum_probs=74.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...++||+|+||.||++... +|+.||||+++..  .....+.|.+|+.+|++++|||||++++++...+..+||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            57888899999999999999975 4899999999754  23345689999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++|+|.++|...
T Consensus       104 y~~gg~L~~~i~~~  117 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ  117 (350)
T ss_dssp             CCTTCBHHHHHHHT
T ss_pred             CCCCCcHHHHHHHc
Confidence            99999999999643

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.48  E-value=4.3e-14  Score=144.20  Aligned_cols=90  Identities=27%  Similarity=0.423  Sum_probs=80.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...++||+|+||.||++... +|+.||||+++.......+.+.+|+.+|++++|||||++++++...+..+||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            45777789999999999999975 48999999997554455667899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus       154 ~gg~L~~~l~~  164 (346)
T 4fih_A          154 EGGALTDIVTH  164 (346)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHHc
Confidence            99999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.48  E-value=3.1e-14  Score=143.62  Aligned_cols=95  Identities=22%  Similarity=0.369  Sum_probs=74.6

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHH--HHHHHHhcCCCCceeceeEEEEECC----eEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFK--NEVTLIARLQHRNLVKLLGCCIQAD----ESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~--~E~~~l~~l~H~nlv~l~g~~~~~~----~~~lV  547 (579)
                      ++...++||+|+||.||+|++ +|+.||||+++..   ..+++.  +|+..+.+++|||||+++|+|...+    +.+||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            456668999999999999998 5899999999643   233444  4555567889999999999998754    57999


Q ss_pred             EeccCCCCHHHHhcCCCCCCcccCcccccc
Q 008046          548 YEYMPNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      ||||++|+|.++|....     ++|..+.+
T Consensus        80 ~Ey~~~gsL~~~l~~~~-----l~~~~~~~  104 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRYT-----VTVEGMIK  104 (303)
T ss_dssp             EECCTTCBHHHHHHHCC-----BCHHHHHH
T ss_pred             ecCCCCCcHHHHHHhCC-----CCHHHHHH
Confidence            99999999999997532     55655544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.47  E-value=8.9e-14  Score=145.46  Aligned_cols=90  Identities=27%  Similarity=0.423  Sum_probs=81.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...++||+|+||.||++.... |+.||||++........+.+.+|+.+|++++|||||++++++...+..+||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            457788899999999999999754 8999999998665555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus       231 ~gG~L~~~i~~  241 (423)
T 4fie_A          231 EGGALTDIVTH  241 (423)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHhc
Confidence            99999999853

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.46  E-value=4.5e-14  Score=145.05  Aligned_cols=101  Identities=25%  Similarity=0.430  Sum_probs=82.1

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEecC------CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCceece
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQ-HRNLVKL  534 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~nlv~l  534 (579)
                      ++..+.+...++|...++||+|+||.||+|....      ++.||||+++.... ...++|.+|+.+|.++. |||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            3334445556788888999999999999998643      35799999976533 34568999999999995 5999999


Q ss_pred             eEEEEEC-CeEEEEEeccCCCCHHHHhcCC
Q 008046          535 LGCCIQA-DESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       535 ~g~~~~~-~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|+|.+. ++.+||||||++|+|.++|+..
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence            9999764 5689999999999999999753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.43  E-value=1.4e-13  Score=138.21  Aligned_cols=90  Identities=26%  Similarity=0.305  Sum_probs=79.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++... +++.||||+++..   .....+.+.+|+.+|.+++|||||++++++...+..+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            46888899999999999999975 4899999999743   2234578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.++|..
T Consensus       112 Ey~~gG~L~~~i~~  125 (311)
T 4aw0_A          112 SYAKNGELLKYIRK  125 (311)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999999964

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.43  E-value=2.4e-13  Score=135.64  Aligned_cols=87  Identities=26%  Similarity=0.384  Sum_probs=73.4

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE----CCeEEEEE
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----ADESMLIY  548 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----~~~~~lV~  548 (579)
                      ...++||+|+||.||+|.... +..||+|.+...  .....+.|.+|+.+|++++|||||++++++..    ....+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            444689999999999999754 889999999643  23345689999999999999999999999865    24579999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      |||++|+|.++|..
T Consensus       109 Ey~~gg~L~~~l~~  122 (290)
T 3fpq_A          109 ELMTSGTLKTYLKR  122 (290)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHh
Confidence            99999999999964

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.40  E-value=1.1e-12  Score=110.98  Aligned_cols=102  Identities=13%  Similarity=0.234  Sum_probs=80.6

Q ss_pred             ccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcC
Q 008046           18 NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDG   96 (579)
Q Consensus        18 ~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~   96 (579)
                      .|+|.+||.|.+|+.|  .+|.|.|.|...++     | +.|..   .. ||.+|+..+.  ....+.+.++| |||.|.
T Consensus         2 ~~~l~~gq~L~~g~~L--~~g~~~L~~q~dGn-----L-vl~~~---~~-vW~snt~~~~--~~~~l~l~~dGNLVl~~~   67 (111)
T 3mez_A            2 NNVLLTGDVIHTDNQL--SYESAAFVMQGDCN-----L-VLYNE---AG-GFQSNTHGRG--VDCTLRLNNRGQLEIHSA   67 (111)
T ss_dssp             TTEEETTCEECTTCEE--EETTEEEEECTTSC-----E-EEECS---SC-CEECCCTTSC--SSCEEEECTTSCEEEECS
T ss_pred             cCEeCCCCEeCCCCEE--ecCCEEEEEccCCe-----E-EEECC---CC-EEECCcccCC--cCEEEEEcCCCcEEEEeC
Confidence            5789999999999999  47999999976664     3 23543   23 9999998762  24689999999 999998


Q ss_pred             CCc-EEEeecCCC--CCCCcEEEEecCCCEEEEcCCCCceeeee
Q 008046           97 RDR-IFWSSNTSI--TMKNPVVQLMDSGNLVLTDGNYNSLLWQS  137 (579)
Q Consensus        97 ~~~-~~Wst~~~~--~~~~~~a~lldsGNlVL~~~~~~~~lWQS  137 (579)
                      ++. ++|++++..  ......+.|+|+|||||++    ..+|+|
T Consensus        68 ~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~----~~~W~s  107 (111)
T 3mez_A           68 NSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG----PAIWST  107 (111)
T ss_dssp             SCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC----SEEEEC
T ss_pred             CCCEEEEEeccccCCCCcCEEEEECCCCeEEEec----cCEEcc
Confidence            876 599999632  2345689999999999996    479998

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.40  E-value=5.6e-13  Score=133.93  Aligned_cols=91  Identities=21%  Similarity=0.381  Sum_probs=75.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECC--------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--------  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--------  542 (579)
                      ++|...+.||+|+||.||++... +++.||||+++... ....+.+.+|+.+|++++|||||++++++...+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            35777889999999999999965 48999999997543 334568999999999999999999999987543        


Q ss_pred             ----eEEEEEeccCCCCHHHHhcCC
Q 008046          543 ----ESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       543 ----~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                          ..+|||||+++|+|.++|...
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~  109 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGR  109 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhc
Confidence                368999999999999999753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.37  E-value=7.2e-13  Score=134.68  Aligned_cols=86  Identities=22%  Similarity=0.240  Sum_probs=75.2

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .+.|...++||+|+||.||++.... |+.||||+++....     +.+|+.+|.+++|||||++++++...+..+|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3457777899999999999999754 89999999975321     24799999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      |++|+|.++|..
T Consensus       132 ~~gg~L~~~l~~  143 (336)
T 4g3f_A          132 LEGGSLGQLIKQ  143 (336)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             cCCCcHHHHHHH
Confidence            999999999964

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.36  E-value=1.2e-12  Score=129.58  Aligned_cols=89  Identities=27%  Similarity=0.452  Sum_probs=73.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++... +++.||||+++...   ....+.+.+|+.+|++++|||||++++++...+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            57888899999999999999965 48999999997542   233567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+ +|+|.++|..
T Consensus        93 Ey~-~g~L~~~l~~  105 (275)
T 3hyh_A           93 EYA-GNELFDYIVQ  105 (275)
T ss_dssp             ECC-CEEHHHHHHH
T ss_pred             eCC-CCCHHHHHHH
Confidence            999 6899999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.34  E-value=4e-13  Score=134.84  Aligned_cols=90  Identities=23%  Similarity=0.286  Sum_probs=72.4

Q ss_pred             ccccccceecccCceeEEEEEec----CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...++||+|+||.||++...    .++.||||.++...  ......+.+|+.+|.+++|||||++++++...+..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46888899999999999999852    36789999997542  2234578999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+++|+|.++|..
T Consensus       104 vmEy~~gg~L~~~l~~  119 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSK  119 (304)
T ss_dssp             EECCCTTCEEHHHHHH
T ss_pred             EEEcCCCCCHHHHHHh
Confidence            9999999999999964

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.34  E-value=4.5e-13  Score=136.01  Aligned_cols=114  Identities=34%  Similarity=0.625  Sum_probs=95.3

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECC
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD  542 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~  542 (579)
                      +.+.++..++++|...+.||+|+||.||++...+++.||||++........+.|.+|+.++.+++||||+++++++...+
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN  108 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            34455566788999999999999999999998889999999988665566788999999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcCCCCCCcccCccccc
Q 008046          543 ESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                      ..++|+||+++|+|.+++.........++|..+.
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  142 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL  142 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHH
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHH
Confidence            9999999999999999997654433345554443

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.34  E-value=8e-13  Score=134.34  Aligned_cols=117  Identities=38%  Similarity=0.624  Sum_probs=98.1

Q ss_pred             ccccCHHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          460 LWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       460 ~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      ...+++.++...+++|...+.||+|+||.||++...+++.||||++..... .....|.+|+.++.+++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            456889999999999999999999999999999987899999999975422 2334799999999999999999999999


Q ss_pred             EECCeEEEEEeccCCCCHHHHhcCCCCCCcccCccccc
Q 008046          539 IQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       539 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                      ......++|+||+++|+|.+++.........+++..+.
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  134 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ  134 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHH
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHH
Confidence            99999999999999999999998755444445554443

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.31  E-value=1e-11  Score=105.39  Aligned_cols=95  Identities=21%  Similarity=0.290  Sum_probs=71.8

Q ss_pred             CCCCCCCCcceEEEecCC-eEEEcC-CCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCe
Q 008046           73 RETPLTDQSGLLNVTSKG-IVLLDG-RDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMK  150 (579)
Q Consensus        73 r~~p~~~~~~~l~~~~~G-L~l~~~-~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~  150 (579)
                      .+.|+.+....|.++.|| |||.+. .+.++|++++........++|+|+|||||++. .+.++|||-.+          
T Consensus        17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~-~~~~iW~S~t~----------   85 (113)
T 3mez_B           17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDD-RLNTVFVSNTV----------   85 (113)
T ss_dssp             TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECT-TSCEEEECSCC----------
T ss_pred             CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECC-CCCEEEECCCc----------
Confidence            345555556789999999 999998 58899999986433456899999999999986 45789998332          


Q ss_pred             ecccccCCCceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          151 LGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       151 l~~~~~tg~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                                           ...|.|.+.|+++|+..++  .  .+.|.+|+
T Consensus        86 ---------------------~~~~~~~~~L~~dGnlvly--~--~~~W~s~~  113 (113)
T 3mez_B           86 ---------------------GQEGDYVLILQINGQAVVY--G--PAVWSTAA  113 (113)
T ss_dssp             ---------------------CSSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred             ---------------------CCCCCEEEEEcCCceEEEe--c--CCEecCCC
Confidence                                 0124588999999986665  3  57888763

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.30  E-value=5.9e-12  Score=137.89  Aligned_cols=90  Identities=28%  Similarity=0.407  Sum_probs=81.1

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...++||+|+||.||++.... |+.||+|.+........+.+.+|+.+|.+++|||||++++++......+||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            567888899999999999999754 8999999998665555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.++|.+
T Consensus       237 ~gg~L~~~i~~  247 (573)
T 3uto_A          237 SGGELFEKVAD  247 (573)
T ss_dssp             CCCBHHHHHTC
T ss_pred             CCCcHHHHHHH
Confidence            99999999964

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.28  E-value=1.8e-11  Score=124.38  Aligned_cols=102  Identities=25%  Similarity=0.323  Sum_probs=88.7

Q ss_pred             cccCHHHHHHhccc----------ccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCC
Q 008046          461 WEFDFASIAKATDN----------FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHR  529 (579)
Q Consensus       461 ~~~~~~~l~~at~~----------f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~  529 (579)
                      ..+++++++.+++.          |...+.||+|+||.||++... +|+.||||++........+.+.+|+.++.+++|+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45778888877754          555678999999999999976 5899999999866666678899999999999999


Q ss_pred             ceeceeEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       530 nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ||+++++++...+..++||||+++|+|.+++..
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  135 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ  135 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh
Confidence            999999999999999999999999999999864

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.27  E-value=1.8e-11  Score=103.51  Aligned_cols=94  Identities=15%  Similarity=0.198  Sum_probs=69.9

Q ss_pred             CCCCCCcceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecc
Q 008046           75 TPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGR  153 (579)
Q Consensus        75 ~p~~~~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~  153 (579)
                      .++......|.++.|| |||.+..+  +|++++........++|+|+|||||++.+.+.++|||..+             
T Consensus        15 ~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~-------------   79 (111)
T 3mez_A           15 NQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS-------------   79 (111)
T ss_dssp             CEEEETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS-------------
T ss_pred             CEEecCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc-------------
Confidence            3334445679999999 99999876  9999986433457899999999999986333459999732             


Q ss_pred             cccCCCceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          154 NFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       154 ~~~tg~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                                      .....|.|.+.|++||+.+++  .  .++|.+++
T Consensus        80 ----------------~~~~~~~~~l~Lq~dGNlvly--~--~~~W~s~t  109 (111)
T 3mez_A           80 ----------------VNTVRGNYAATLGPDQHVTIY--G--PAIWSTPA  109 (111)
T ss_dssp             ----------------CCCCSSCCEEEECTTSCEEEE--C--SEEEECCC
T ss_pred             ----------------cCCCCcCEEEEECCCCeEEEe--c--cCEEccCC
Confidence                            011347899999999987665  3  67898864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.24  E-value=2e-11  Score=123.00  Aligned_cols=90  Identities=27%  Similarity=0.391  Sum_probs=81.3

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++.... ++.||+|.+........+.|.+|+.++.+++||||+++++++...+..++|+||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            467777899999999999999754 8899999987665666788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus        90 ~~~~L~~~l~~  100 (310)
T 3s95_A           90 KGGTLRGIIKS  100 (310)
T ss_dssp             TTCBHHHHHHH
T ss_pred             CCCcHHHHHHh
Confidence            99999999975

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.22  E-value=1.5e-11  Score=128.38  Aligned_cols=89  Identities=17%  Similarity=0.376  Sum_probs=75.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC------Ce
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------DE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~~  543 (579)
                      ++|...++||+|+||.||++... .|+.||||+++...  ....+.+.+|+.+|++++|||||++++++...      ..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            46888899999999999999975 48999999997542  23456789999999999999999999987642      56


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .+||||||+ |+|.++|..
T Consensus       134 ~~ivmE~~~-g~L~~~i~~  151 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS  151 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS
T ss_pred             EEEEEeCCC-CCHHHHHHh
Confidence            899999995 789999964

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.21  E-value=4.2e-11  Score=120.43  Aligned_cols=103  Identities=40%  Similarity=0.650  Sum_probs=90.7

Q ss_pred             cccccCHHHHHHhccccccc------ceecccCceeEEEEEecCCcEEEEEEecCCC----cccHHHHHHHHHHHhcCCC
Q 008046          459 ELWEFDFASIAKATDNFASY------NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS----GQGMEEFKNEVTLIARLQH  528 (579)
Q Consensus       459 ~~~~~~~~~l~~at~~f~~~------~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H  528 (579)
                      ....|++.++..++++|...      +.||+|+||.||++.. +++.||||.+....    ....+.|.+|+.++.+++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            35678999999999999877      8899999999999987 57899999986431    2335689999999999999


Q ss_pred             CceeceeEEEEECCeEEEEEeccCCCCHHHHhcC
Q 008046          529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       529 ~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      |||+++++++...+..++|+||+++|+|.+++..
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC  123 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh
Confidence            9999999999988899999999999999999964

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.19  E-value=4.4e-11  Score=123.35  Aligned_cols=91  Identities=21%  Similarity=0.313  Sum_probs=78.5

Q ss_pred             HHhcccccccceecccCceeEEEEEec----CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCe
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE  543 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~  543 (579)
                      ....+.|...++||+|+||.||+++..    .++.||+|.+...  .....+.+|+.+|..+ +|||||+++.++...++
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            344577998999999999999999853    3678999998653  3346788999999998 69999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhc
Q 008046          544 SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~  561 (579)
                      .+|||||+++|+|.+++.
T Consensus        95 ~~lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILN  112 (361)
T ss_dssp             EEEEEECCCCCCHHHHHT
T ss_pred             EEEEEeCCCcccHHHHHc
Confidence            999999999999999984

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.19  E-value=1.8e-11  Score=127.12  Aligned_cols=91  Identities=30%  Similarity=0.541  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEec----CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||+|...    .+..||||.++.. .....++|.+|+.++.+++||||+++++++......++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            46788889999999999999875    4678999999754 334456899999999999999999999999998999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.+++...
T Consensus       125 ~e~~~~~sL~~~l~~~  140 (373)
T 2qol_A          125 TEYMENGSLDSFLRKH  140 (373)
T ss_dssp             EECCTTCBHHHHHHTT
T ss_pred             EeCCCCCcHHHHHHhC
Confidence            9999999999999753

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.17  E-value=7.8e-11  Score=116.20  Aligned_cols=112  Identities=17%  Similarity=0.309  Sum_probs=86.1

Q ss_pred             ccccccCCCCc----cCCCCEEEecCCeEEEEeeCCC--CCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecC
Q 008046           16 AANDNITPSQS----IRDGETLVSVNGTFELGFFSPG--TSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSK   89 (579)
Q Consensus        16 ~~~~~i~~g~~----l~~~~~l~S~~g~F~lgF~~~~--~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~   89 (579)
                      ..+|++.||+.    |..|+.|.| ..+++.|+|...  ...+.+  + |.+  ..+++|.+++..+-  . ..+.++.+
T Consensus       134 ~ptdtlLpg~~~~~~l~~g~~L~S-~~dps~G~fsl~l~~dGnlv--L-y~~--~~~~yW~Sgt~~~~--~-~~l~l~~d  204 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPGSELVQ-GVVYGAGASKLVFQGDGNLV--A-YGP--NGAATWNAGTQGKG--A-VRAVFQGD  204 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSSEEECT-TCEEEETTEEEEECTTSCEE--E-ECT--TSSEEEECCCTTTT--C-CEEEECTT
T ss_pred             ccccccccccccccccccCccccc-CCCCCCceEEEeecCCceEE--E-EeC--CCeEEEECCCCCCc--c-EEEEEcCC
Confidence            56899999999    888888855 456777766532  222333  3 332  35899999998762  2 67999999


Q ss_pred             C-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccC
Q 008046           90 G-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDH  140 (579)
Q Consensus        90 G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~  140 (579)
                      | |++.|.++.++|++++.. .....++|+|+|||||++.   ..+||||||
T Consensus       205 GnLvl~d~~~~~vWsS~t~~-~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~  252 (276)
T 3m7h_A          205 GNLVVYGAGNAVLWHSHTGG-HASAVLRLQANGSIAILDE---KPVWARFGF  252 (276)
T ss_dssp             SCEEEECTTSCEEEECSCTT-CTTCEEEECTTSCEEEEEE---EEEEESSSC
T ss_pred             CeEEEEeCCCcEEEEecCCC-CCCEEEEEcCCccEEEEcC---CCeEEccCc
Confidence            9 999999888999999763 3457899999999999974   589999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.17  E-value=6.3e-12  Score=133.16  Aligned_cols=99  Identities=17%  Similarity=0.239  Sum_probs=84.7

Q ss_pred             CHHHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEE
Q 008046          464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCI  539 (579)
Q Consensus       464 ~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~  539 (579)
                      .+.++...+++|...++||+|+||.||++.... ++.||+|+++...   ....+.+.+|+.++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            345566667899999999999999999999865 7889999996421   122335899999999999999999999999


Q ss_pred             ECCeEEEEEeccCCCCHHHHhcC
Q 008046          540 QADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       540 ~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..+..+|||||+++|+|.++|..
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~  167 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSK  167 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHT
T ss_pred             eCCEEEEEEecCCCCcHHHHHHH
Confidence            99999999999999999999975

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.16  E-value=6e-11  Score=116.89  Aligned_cols=90  Identities=26%  Similarity=0.544  Sum_probs=80.3

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...+.||+|+||.||++...+++.||+|++... ....+.+.+|+.++.+++||||+++++++......++|+||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            457777899999999999999888889999999754 3345789999999999999999999999999899999999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +|+|.+++...
T Consensus        89 ~~~L~~~l~~~   99 (269)
T 4hcu_A           89 HGCLSDYLRTQ   99 (269)
T ss_dssp             TCBHHHHHHTT
T ss_pred             CCcHHHHHHhc
Confidence            99999999653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.16  E-value=1e-10  Score=117.27  Aligned_cols=90  Identities=24%  Similarity=0.465  Sum_probs=80.5

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   99 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence            5678888999999999999986 458899999997555555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus       100 ~~~~L~~~~~~  110 (297)
T 3fxz_A          100 AGGSLTDVVTE  110 (297)
T ss_dssp             TTCBHHHHHHH
T ss_pred             CCCCHHHHHhh
Confidence            99999999864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.14  E-value=5.9e-11  Score=120.72  Aligned_cols=91  Identities=27%  Similarity=0.484  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEec----CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +.|...+.||+|+||.||++...    .+..||||.++.. .....+.|.+|+.++.+++||||+++++++...+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            45667789999999999999974    3456999999754 334456899999999999999999999999888899999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.+++...
T Consensus       129 ~e~~~~~~L~~~l~~~  144 (325)
T 3kul_A          129 TEYMENGSLDTFLRTH  144 (325)
T ss_dssp             EECCTTCBHHHHHHTT
T ss_pred             eeCCCCCcHHHHHHhc
Confidence            9999999999999653

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.12  E-value=1.8e-10  Score=116.83  Aligned_cols=92  Identities=20%  Similarity=0.353  Sum_probs=77.4

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECC--------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--------  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--------  542 (579)
                      ++|...+.||+|+||.||++... +++.||||+++... ....+.+.+|+.++.+++||||+++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            46777889999999999999986 58999999997543 334578999999999999999999999986643        


Q ss_pred             -------------------------------------------------eEEEEEeccCCCCHHHHhcCCC
Q 008046          543 -------------------------------------------------ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       543 -------------------------------------------------~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                                                                       ..++||||+++|+|.+++....
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence                                                             3799999999999999997543

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.12  E-value=2.6e-10  Score=96.24  Aligned_cols=84  Identities=23%  Similarity=0.394  Sum_probs=64.0

Q ss_pred             cceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCC
Q 008046           81 SGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGM  159 (579)
Q Consensus        81 ~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~  159 (579)
                      .-.|.++.|| |+|.+.  .++|++++........++|+|+|||||+|. .+.++|||-.+-                  
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~-~~~~iW~S~t~~------------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDD-DFKTIWSSRSSS------------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECT-TCCEEEECCCCC------------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeC-CCCEEEEcCCcC------------------
Confidence            3678999999 999887  589999986433346899999999999986 467899985320                  


Q ss_pred             ceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecC
Q 008046          160 DRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAG  202 (579)
Q Consensus       160 ~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g  202 (579)
                                   ..|.|.+.|+++|+..++  .  .+.|.+|
T Consensus        84 -------------~~~~~~~~L~~dGNlvly--~--~~~W~t~  109 (110)
T 3r0e_B           84 -------------KQGEYVLILQDDGFGVIY--G--PAIFETS  109 (110)
T ss_dssp             -------------SSSCCEEEECTTSCEEEE--C--SEEEESC
T ss_pred             -------------CCCCEEEEEcCCccEEEe--c--CCEecCC
Confidence                         124578999999976664  3  3678876

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.12  E-value=1.6e-10  Score=117.79  Aligned_cols=91  Identities=24%  Similarity=0.411  Sum_probs=79.8

Q ss_pred             cccccccceecccCceeEEEEEe-cCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .++|...+.||+|+||.||++.. ..++.||||++...  .....+.+.+|+.++..++||||+++++++...+..++|+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            35688888999999999999997 45899999999643  2334567899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        94 e~~~~~~L~~~l~~  107 (328)
T 3fe3_A           94 EYASGGEVFDYLVA  107 (328)
T ss_dssp             CCCTTCBHHHHHHH
T ss_pred             ECCCCCcHHHHHHH
Confidence            99999999999854

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.12  E-value=6.1e-11  Score=127.86  Aligned_cols=91  Identities=31%  Similarity=0.553  Sum_probs=80.8

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .++|...++||+|+||.||+|.... +..||||.++... ...++|.+|+.+|.+++|||||+++++|......+|||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            4567777899999999999999865 7899999997543 3467899999999999999999999999998999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++|+|.++|...
T Consensus       298 ~~~g~L~~~l~~~  310 (495)
T 1opk_A          298 MTYGNLLDYLREC  310 (495)
T ss_dssp             CTTCBHHHHHHHS
T ss_pred             cCCCCHHHHHHhc
Confidence            9999999999753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.11  E-value=1.3e-10  Score=123.84  Aligned_cols=91  Identities=32%  Similarity=0.469  Sum_probs=80.3

Q ss_pred             HhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ...++|...++||+|+||.||+|....+..||||.++... ...+.|.+|+.+|.+++|||||++++++. .+..++|||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            3456777888999999999999999888899999998643 45789999999999999999999999986 667899999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.++|..
T Consensus       263 ~~~~g~L~~~l~~  275 (454)
T 1qcf_A          263 FMAKGSLLDFLKS  275 (454)
T ss_dssp             CCTTCBHHHHHHS
T ss_pred             ecCCCcHHHHHHh
Confidence            9999999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.11  E-value=7.2e-11  Score=122.55  Aligned_cols=87  Identities=30%  Similarity=0.439  Sum_probs=72.5

Q ss_pred             cccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCC
Q 008046          476 ASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNK  554 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~G  554 (579)
                      ...+.||+|+||.||++... +++.||+|.++.......++|.+|+.++.+++||||+++++++...+..+|||||+++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            33468999999999999875 48899999998765556678999999999999999999999999999999999999999


Q ss_pred             CHHHHhcC
Q 008046          555 SLDFFIFD  562 (579)
Q Consensus       555 sL~~~l~~  562 (579)
                      +|.+++..
T Consensus       172 ~L~~~l~~  179 (373)
T 2x4f_A          172 ELFDRIID  179 (373)
T ss_dssp             EEHHHHHH
T ss_pred             cHHHHHHh
Confidence            99998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.11  E-value=6.1e-11  Score=123.22  Aligned_cols=91  Identities=23%  Similarity=0.458  Sum_probs=79.5

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .++|...+.||+|+||.||+|... +++.||||.++... ....+.|.+|+.+|.+++||||+++++++...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            356777789999999999999986 58899999997543 2334579999999999999999999999998889999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus       193 ~~~~g~L~~~l~~  205 (377)
T 3cbl_A          193 LVQGGDFLTFLRT  205 (377)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             cCCCCCHHHHHHh
Confidence            9999999999964

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.11  E-value=1.9e-10  Score=114.70  Aligned_cols=90  Identities=9%  Similarity=0.092  Sum_probs=79.4

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...+.||+|+||.||++.... ++.||||.+.....   ...+.|.+|+.++.+++|+||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            568888899999999999999765 88999999975422   23478999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus       111 e~~~g~~L~~~l~~  124 (286)
T 3uqc_A          111 EWIRGGSLQEVADT  124 (286)
T ss_dssp             ECCCEEEHHHHHTT
T ss_pred             EecCCCCHHHHHhc
Confidence            99999999999853

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.11  E-value=1.7e-10  Score=126.59  Aligned_cols=90  Identities=23%  Similarity=0.323  Sum_probs=74.3

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHH---HHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFK---NEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~---~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...++||+|+||.||++.... |+.||||++++.   .........   .++.++..++|||||++++++...+..+
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            578888999999999999999754 899999999642   112223333   4466777889999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      |||||+++|+|.++|..
T Consensus       269 lVmEy~~GGdL~~~l~~  285 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQ  285 (689)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEecCCCCcHHHHHHh
Confidence            99999999999999963

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.10  E-value=1.1e-10  Score=120.16  Aligned_cols=90  Identities=27%  Similarity=0.426  Sum_probs=78.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-----SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      +.|...+.||+|+||.||++... +++.||||.+...     .....+.+.+|+.++.+++||||+++++++...+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            45777789999999999999875 4889999998532     12246789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+++|+|.+++..
T Consensus       104 v~e~~~g~~L~~~l~~  119 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVK  119 (351)
T ss_dssp             EEECCSSCBHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHH
Confidence            9999999999888854

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.10  E-value=1.8e-10  Score=120.11  Aligned_cols=91  Identities=24%  Similarity=0.321  Sum_probs=81.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...+.||+|+||.||++... +++.+|+|.+..........+.+|+.++.+++||||+++++++......++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            56888889999999999999975 48899999998655555668999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++|+|.+++...
T Consensus       131 ~gg~L~~~l~~~  142 (387)
T 1kob_A          131 SGGELFDRIAAE  142 (387)
T ss_dssp             CCCBHHHHTTCT
T ss_pred             CCCcHHHHHHhh
Confidence            999999999653

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.10  E-value=3.9e-10  Score=95.08  Aligned_cols=86  Identities=19%  Similarity=0.306  Sum_probs=65.4

Q ss_pred             cceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCC
Q 008046           81 SGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGM  159 (579)
Q Consensus        81 ~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~  159 (579)
                      .-.|.++.|| |+|.+. +.++|++++........++|+|+|||||+|. .+.++|||....                  
T Consensus        20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~-~~~~~W~S~t~~------------------   79 (109)
T 3dzw_A           20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSP-RNNPIWASNTGG------------------   79 (109)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECT-TSCEEEECCCCC------------------
T ss_pred             CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECC-CCCEEEECCCCC------------------
Confidence            4679999999 999987 6899999986433456899999999999986 457899985321                  


Q ss_pred             ceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          160 DRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       160 ~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                                   ..+.|.+.|+++|+..++  .  .+.|.+++
T Consensus        80 -------------~~~~~~~~L~ddGNlvly--~--~~~W~s~t  106 (109)
T 3dzw_A           80 -------------ENGNYVCVLQKDRNVVIY--G--TARWATGT  106 (109)
T ss_dssp             -------------SSSCEEEEECTTSCEEEE--E--SCCCCCCC
T ss_pred             -------------CCCCEEEEEeCCCEEEEE--C--CCEEeCCC
Confidence                         124578999999986664  3  26777654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.10  E-value=1.7e-10  Score=116.49  Aligned_cols=93  Identities=28%  Similarity=0.477  Sum_probs=80.7

Q ss_pred             HhcccccccceecccCceeEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ...++|...+.||+|+||.||++.. .++.||||.+....  ....++|.+|+.++.+++||||+++++++...+..++|
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3346788888999999999999986 67899999997543  23456899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.+++...
T Consensus       113 ~e~~~~~~L~~~l~~~  128 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKS  128 (309)
T ss_dssp             EECCTTCBHHHHHHST
T ss_pred             EecCCCCcHHHHHhhc
Confidence            9999999999999753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.10  E-value=7.2e-11  Score=116.10  Aligned_cols=90  Identities=27%  Similarity=0.434  Sum_probs=78.0

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... ++.+|||.++...  ....+.|.+|+.++.+++||||+++++++...  ...++|+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            45677789999999999999984 7899999997542  33456899999999999999999999999876  6789999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus        89 e~~~~~~L~~~l~~~  103 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEG  103 (271)
T ss_dssp             ECCTTCBHHHHHHSC
T ss_pred             cccCCCcHHHHHhhc
Confidence            999999999999764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.10  E-value=6.6e-11  Score=120.86  Aligned_cols=95  Identities=29%  Similarity=0.524  Sum_probs=81.9

Q ss_pred             HHhcccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA  541 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~  541 (579)
                      ....++|...+.||+|+||.||++....      ++.||||.++... ....+.|.+|+.++.+++||||+++++++...
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            3445778888999999999999999753      4789999997543 33456899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhcCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +..++|+||+++|+|.++|...
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT
T ss_pred             CceEEEEecCCCCcHHHHHHHh
Confidence            9999999999999999999753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.10  E-value=3.2e-10  Score=117.08  Aligned_cols=91  Identities=26%  Similarity=0.337  Sum_probs=79.6

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      .+.|...+.||+|+||.||++.... |+.+|+|.++....      ...+.+.+|+.++.+++||||+++++++......
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            3567778899999999999999754 88999999975422      1357899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++|+|.+++..
T Consensus        91 ~lv~e~~~gg~L~~~l~~  108 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ  108 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999999999964

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.10  E-value=1.3e-10  Score=118.72  Aligned_cols=94  Identities=20%  Similarity=0.269  Sum_probs=81.1

Q ss_pred             HHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-----SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA  541 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~  541 (579)
                      +....++|...+.||+|+||.||++... ++..||+|.+...     .....+.+.+|+.++.+++||||+++++++...
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            3455577888899999999999999874 4789999998632     234457899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhc
Q 008046          542 DESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      +..++||||+++|+|.+++.
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEE
T ss_pred             CeEEEEEeCCCCCcHHHHHH
Confidence            99999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.10  E-value=6.5e-11  Score=124.32  Aligned_cols=98  Identities=20%  Similarity=0.242  Sum_probs=83.2

Q ss_pred             HHHHHHhcccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEE
Q 008046          465 FASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ  540 (579)
Q Consensus       465 ~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~  540 (579)
                      +.++....++|...++||+|+||.||++.... ++.+|+|+++..   .....+.+.+|+.++..++|||||++++++..
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            34555567789999999999999999999765 889999998642   11223468899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ....++||||+++|+|.+++..
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~  162 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSN  162 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHH
T ss_pred             CCEEEEEEeCCCCCcHHHHHHc
Confidence            9999999999999999999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.10  E-value=8.5e-11  Score=117.03  Aligned_cols=90  Identities=26%  Similarity=0.336  Sum_probs=79.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.|...++||+|+||.||++... .+..+|+|.+.... ....+.+.+|+.++.+++||||+++++++......++|+||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            46777889999999999999875 48899999987542 34567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus       102 ~~~~~L~~~l~~  113 (285)
T 3is5_A          102 CEGGELLERIVS  113 (285)
T ss_dssp             CSCCBHHHHHHH
T ss_pred             CCCCcHHHHHHh
Confidence            999999999854

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.09  E-value=2.1e-10  Score=113.74  Aligned_cols=90  Identities=30%  Similarity=0.538  Sum_probs=77.7

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .++|...+.||+|+||.||++...++..||+|.++... ...+++.+|+.++.+++|+||+++++++...+..++|+||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            45677778999999999999998888899999997543 34578999999999999999999999999889999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus       102 ~~~~L~~~l~~  112 (283)
T 3gen_A          102 ANGCLLNYLRE  112 (283)
T ss_dssp             TTCBHHHHHHC
T ss_pred             CCCcHHHHHHH
Confidence            99999999965

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.09  E-value=2.3e-10  Score=112.51  Aligned_cols=90  Identities=29%  Similarity=0.492  Sum_probs=80.1

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .++|...+.||+|+||.||++...++..||+|.++... ...+++.+|+.++.+++||||+++++++......++|+||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            35677778999999999999998888899999997543 34578999999999999999999999999888999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus        86 ~~~~L~~~l~~   96 (268)
T 3sxs_A           86 SNGCLLNYLRS   96 (268)
T ss_dssp             TTCBHHHHHHH
T ss_pred             CCCcHHHHHHH
Confidence            99999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.08  E-value=3e-10  Score=115.26  Aligned_cols=89  Identities=20%  Similarity=0.317  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|.+... ....+.+.+|+.++..++||||+++++++...+..++|+||+
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            567778899999999999999754 788999998743 334567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus        84 ~g~~L~~~l~~   94 (321)
T 1tki_A           84 SGLDIFERINT   94 (321)
T ss_dssp             CCCBHHHHHTS
T ss_pred             CCCCHHHHHHh
Confidence            99999999965

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.08  E-value=2.5e-10  Score=121.54  Aligned_cols=89  Identities=28%  Similarity=0.512  Sum_probs=78.1

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECC-eEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD-ESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~-~~~lV~Ey  550 (579)
                      .++|...+.||+|+||.||+|... ++.||||.++...  ..+.|.+|+.+|.+++|||||++++++...+ ..++||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            356777789999999999999874 7899999997543  4578999999999999999999999988765 78999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++|+|.++|...
T Consensus       269 ~~~g~L~~~l~~~  281 (450)
T 1k9a_A          269 MAKGSLVDYLRSR  281 (450)
T ss_dssp             CTTCBHHHHHHHH
T ss_pred             cCCCcHHHHHHhc
Confidence            9999999999753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.08  E-value=1.4e-10  Score=120.13  Aligned_cols=92  Identities=28%  Similarity=0.507  Sum_probs=79.0

Q ss_pred             cccccccceecccCceeEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA  541 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~  541 (579)
                      .++|...+.||+|+||.||++...        .+..||||.++... ....+.+.+|+.++.++ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            356777889999999999999852        24579999997553 33456899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhcCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +..++|+||+++|+|.++|...
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~  181 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRAR  181 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhh
Confidence            9999999999999999999754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.08  E-value=1.1e-10  Score=120.18  Aligned_cols=102  Identities=25%  Similarity=0.433  Sum_probs=84.3

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEe------cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceece
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKL  534 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l  534 (579)
                      +...+.....++|...+.||+|+||.||++..      .+++.||||+++... ....+.|.+|+.++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            44555566678899999999999999999973      235789999997543 23456899999999999 89999999


Q ss_pred             eEEEEECC-eEEEEEeccCCCCHHHHhcCCC
Q 008046          535 LGCCIQAD-ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       535 ~g~~~~~~-~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ++++...+ ..++||||+++|+|.+++....
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence            99998754 4899999999999999997644

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.08  E-value=7.4e-11  Score=117.91  Aligned_cols=91  Identities=31%  Similarity=0.560  Sum_probs=78.4

Q ss_pred             ccccccceecccCceeEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-----VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~  545 (579)
                      ++|...++||+|+||.||++.+     ..++.||||++........+.|.+|+.++.+++||||+++++++..  ....+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5677778999999999999984     2478999999986655666789999999999999999999999865  34589


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|+||+++|+|.+++...
T Consensus        90 lv~e~~~~~~L~~~l~~~  107 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKH  107 (295)
T ss_dssp             EEEECCTTCBHHHHHHHC
T ss_pred             EEEEeCCCCCHHHHHHhc
Confidence            999999999999999653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.08  E-value=3.9e-10  Score=114.62  Aligned_cols=90  Identities=26%  Similarity=0.373  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      +.|...+.||+|+||.||++.... ++.||+|.++....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            457777899999999999999754 88999999975421      23578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        91 lv~e~~~~~~L~~~l~~  107 (326)
T 2y0a_A           91 LILELVAGGELFDFLAE  107 (326)
T ss_dssp             EEEECCCSCBHHHHHTT
T ss_pred             EEEEcCCCCCHHHHHHh
Confidence            99999999999999964

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.08  E-value=3e-10  Score=112.33  Aligned_cols=90  Identities=20%  Similarity=0.309  Sum_probs=80.5

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...+.||+|+||.||++.... +..+|+|++........+.+.+|+.++.+++||||+++++++......++|+||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            467788899999999999999765 6789999997655556788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        89 ~~~~L~~~~~~   99 (277)
T 3f3z_A           89 TGGELFERVVH   99 (277)
T ss_dssp             CSCBHHHHHHH
T ss_pred             CCCcHHHHHHH
Confidence            99999998864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.08  E-value=2.1e-10  Score=114.09  Aligned_cols=91  Identities=30%  Similarity=0.547  Sum_probs=79.8

Q ss_pred             ccccccceecccCceeEEEEEecC-C-------cEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-G-------QEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++.... +       ..||+|.+........+.|.+|+.++.+++||||+++++++...+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            467777899999999999998653 3       47999999765556678899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++|+|.+++...
T Consensus        88 ~lv~e~~~~~~L~~~l~~~  106 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKN  106 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHT
T ss_pred             EEEEECCCCCCHHHHHHhC
Confidence            9999999999999999753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.07  E-value=1.5e-10  Score=114.68  Aligned_cols=91  Identities=30%  Similarity=0.387  Sum_probs=80.0

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...+.||+|+||.||++... +++.||+|.++..  ......++.+|+..+.++ +||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            356778889999999999999976 5899999999754  233456889999999999 999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus        90 ~e~~~~~~L~~~l~~  104 (289)
T 1x8b_A           90 NEYCNGGSLADAISE  104 (289)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EEecCCCcHHHHHHh
Confidence            999999999999964

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.07  E-value=9.1e-11  Score=123.30  Aligned_cols=99  Identities=19%  Similarity=0.249  Sum_probs=84.4

Q ss_pred             CHHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEE
Q 008046          464 DFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCI  539 (579)
Q Consensus       464 ~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~  539 (579)
                      .++++....++|...+.||+|+||.||++... +++.||+|+++...   ....+.+.+|..++.+++|+||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            44555566788999999999999999999975 48999999996421   123346889999999999999999999999


Q ss_pred             ECCeEEEEEeccCCCCHHHHhcC
Q 008046          540 QADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       540 ~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..+..+|||||+++|+|.++|..
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~  154 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSK  154 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHH
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHh
Confidence            99999999999999999999964

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.07  E-value=2.5e-10  Score=115.49  Aligned_cols=91  Identities=24%  Similarity=0.359  Sum_probs=78.6

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECC--eEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--ESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--~~~lV~  548 (579)
                      +.|...+.||+|+||.||++.... ++.||||+++... ....+.+.+|+.++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            457777899999999999999765 8899999997542 334678899999999999999999999988755  789999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus        89 e~~~~~~L~~~l~~~  103 (319)
T 4euu_A           89 EFCPCGSLYTVLEEP  103 (319)
T ss_dssp             ECCTTCBHHHHHHSG
T ss_pred             eCCCCCCHHHHHHHh
Confidence            999999999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.07  E-value=9.6e-11  Score=121.31  Aligned_cols=90  Identities=30%  Similarity=0.530  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...+.||+|+||.||++...      .+..||||+++.. .......+.+|+.++.+++||||+++++++......+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            56777789999999999999853      3568999999754 3344568999999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +||||+++|+|.+++..
T Consensus       151 lv~e~~~~g~L~~~l~~  167 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRE  167 (367)
T ss_dssp             EEEECCTTEEHHHHHHH
T ss_pred             EEEEeCCCCCHHHHHHh
Confidence            99999999999999975

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.07  E-value=3.5e-10  Score=116.82  Aligned_cols=91  Identities=23%  Similarity=0.377  Sum_probs=79.8

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .++|...+.||+|+||.||++... +++.||+|.+....  ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            356888889999999999999975 48899999997542  234567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus       108 e~~~gg~L~~~l~~  121 (362)
T 2bdw_A          108 DLVTGGELFEDIVA  121 (362)
T ss_dssp             CCCCSCBHHHHHTT
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999998864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.07  E-value=2.2e-10  Score=122.09  Aligned_cols=90  Identities=30%  Similarity=0.490  Sum_probs=78.6

Q ss_pred             hcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ..++|...++||+|+||.||+|....+..||||.++... ...++|.+|+.+|.+++||||+++++++.. +..++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            345677778999999999999999877889999997543 345789999999999999999999999865 678999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.++|..
T Consensus       260 ~~~gsL~~~l~~  271 (452)
T 1fmk_A          260 MSKGSLLDFLKG  271 (452)
T ss_dssp             CTTCBHHHHHSH
T ss_pred             hcCCCHHHHHHh
Confidence            999999999964

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.06  E-value=3.2e-10  Score=115.89  Aligned_cols=90  Identities=23%  Similarity=0.280  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.++..   .....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            56778889999999999999975 4889999999643   2234568899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        85 E~~~gg~L~~~l~~   98 (337)
T 1o6l_A           85 EYANGGELFFHLSR   98 (337)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             eCCCCCcHHHHHHh
Confidence            99999999998864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.06  E-value=2.4e-10  Score=112.25  Aligned_cols=90  Identities=26%  Similarity=0.521  Sum_probs=80.1

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...+.||+|+||.||++...+++.||+|.+.... ...+.+.+|+.++.+++||||+++++++...+..++|+||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            4577778999999999999998888899999997543 345789999999999999999999999998889999999999


Q ss_pred             CCCHHHHhcCC
Q 008046          553 NKSLDFFIFDI  563 (579)
Q Consensus       553 ~GsL~~~l~~~  563 (579)
                      +++|.+++...
T Consensus        87 ~~~L~~~~~~~   97 (267)
T 3t9t_A           87 HGCLSDYLRTQ   97 (267)
T ss_dssp             TCBHHHHHHHT
T ss_pred             CCcHHHHHhhC
Confidence            99999999653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.06  E-value=1.3e-10  Score=117.38  Aligned_cols=91  Identities=26%  Similarity=0.363  Sum_probs=76.9

Q ss_pred             cccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE----CCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----ADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----~~~~~l  546 (579)
                      .++|...+.||+|+||.||++.. .+++.||||++........+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            35688888999999999999997 4589999999876555566789999999999999999999999873    346889


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++|+|.+++..
T Consensus       108 v~e~~~~~~L~~~l~~  123 (317)
T 2buj_A          108 LLPFFKRGTLWNEIER  123 (317)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEEeCCCCcHHHHHHH
Confidence            9999999999999865

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.05  E-value=4.9e-10  Score=112.06  Aligned_cols=90  Identities=24%  Similarity=0.421  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... .+..||+|.+....   ....+.|.+|+.++.+++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            46777789999999999999865 48899999986432   233468999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        91 e~~~g~~L~~~l~~  104 (294)
T 4eqm_A           91 EYIEGPTLSEYIES  104 (294)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHh
Confidence            99999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.04  E-value=3e-10  Score=115.38  Aligned_cols=90  Identities=26%  Similarity=0.329  Sum_probs=76.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++... +++.||||.+..... ...+.+.+|+.++..++|+||+++++++...+..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            56778889999999999999976 588999999874422 3346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        87 ~~~~~L~~~l~~   98 (323)
T 3tki_A           87 CSGGELFDRIEP   98 (323)
T ss_dssp             CTTEEGGGGSBT
T ss_pred             CCCCcHHHHHhh
Confidence            999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.04  E-value=2.1e-10  Score=116.40  Aligned_cols=89  Identities=21%  Similarity=0.307  Sum_probs=74.9

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECC----eEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD----ESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~----~~~lV  547 (579)
                      .++|...++||+|+||.||++... ++.||||+++.. ......+..|+.++.+++|||||++++++....    ..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            356788889999999999999875 789999999643 233446677999999999999999999998744    47999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus       101 ~e~~~~g~L~~~l~~  115 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA  115 (322)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EecCCCCCHHHHHHh
Confidence            999999999999965

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.04  E-value=2.7e-10  Score=124.04  Aligned_cols=90  Identities=30%  Similarity=0.490  Sum_probs=78.7

Q ss_pred             hcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ..++|...++||+|+||.||++....+..||||+++... ...++|.+|+.+|.+++|+|||++++++.. +..+|||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            345677778999999999999999877889999998543 345789999999999999999999999865 678999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.++|..
T Consensus       343 ~~~gsL~~~l~~  354 (535)
T 2h8h_A          343 MSKGSLLDFLKG  354 (535)
T ss_dssp             CTTEEHHHHHSH
T ss_pred             hcCCcHHHHHhh
Confidence            999999999964

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.04  E-value=1e-09  Score=92.31  Aligned_cols=92  Identities=24%  Similarity=0.405  Sum_probs=68.3

Q ss_pred             CCCCCCCcceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeec
Q 008046           74 ETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLG  152 (579)
Q Consensus        74 ~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~  152 (579)
                      +.|+.+....|.++.|| |||.++    +|++++........++|+++|||||+|. ++.++|+|-.+            
T Consensus        15 g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~-~~~~vWss~t~------------   77 (109)
T 3r0e_A           15 EGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNG-DGSTVWKSGAQ------------   77 (109)
T ss_dssp             TCEEEETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECT-TSCEEEECCCC------------
T ss_pred             CCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeC-CCCEEEcCCCc------------
Confidence            34444455779999999 999985    7999986433457899999999999986 45789976211            


Q ss_pred             ccccCCCceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCCC
Q 008046          153 RNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWN  205 (579)
Q Consensus       153 ~~~~tg~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~~  205 (579)
                                         ...+.|.+.++++|+..++  .  .+.|++++|-
T Consensus        78 -------------------~~~~~~~~~L~~dGNlvly--~--~~~W~s~t~~  107 (109)
T 3r0e_A           78 -------------------SVKGNYAAVVHPDGRLVVF--G--PSVFKIDPWV  107 (109)
T ss_dssp             -------------------CSSSCCEEEEETTTEEEEE--C--SEEEEECTTS
T ss_pred             -------------------CCCcCEEEEEcCCCeEEEE--e--cCEECCCCcc
Confidence                               0235678999999976554  3  5789998874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.04  E-value=2e-10  Score=115.68  Aligned_cols=92  Identities=30%  Similarity=0.476  Sum_probs=79.6

Q ss_pred             cccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      .++|...+.||+|+||.||++...      .+..||||.++... ....+.+.+|+.++.+++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            456778889999999999999862      24789999997542 34457899999999999999999999999998999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++|+|.+++...
T Consensus       102 ~lv~e~~~~~~L~~~l~~~  120 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRES  120 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHT
T ss_pred             EEEEeecCCCCHHHHHHHH
Confidence            9999999999999999754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.04  E-value=3.4e-10  Score=113.95  Aligned_cols=90  Identities=24%  Similarity=0.439  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.++..   .....+.+.+|+.++.+++|+||+++++++...+..++|+
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            46888889999999999999964 5889999999743   2334568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus       112 e~~~~~~L~~~l~~  125 (310)
T 2wqm_A          112 ELADAGDLSRMIKH  125 (310)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.03  E-value=1.2e-10  Score=115.74  Aligned_cols=92  Identities=30%  Similarity=0.538  Sum_probs=81.1

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ..++|...+.||+|+||.||++.... +..||+|.+... ....+.+.+|+.++.+++|+||+++++++......++|+|
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            44677888899999999999999765 788999999754 3446789999999999999999999999998889999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++|+|.+++...
T Consensus        90 ~~~~~~L~~~~~~~  103 (288)
T 3kfa_A           90 FMTYGNLLDYLREC  103 (288)
T ss_dssp             CCTTEEHHHHHHHC
T ss_pred             cCCCCcHHHHHHhc
Confidence            99999999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.03  E-value=2.4e-10  Score=113.12  Aligned_cols=91  Identities=22%  Similarity=0.362  Sum_probs=78.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+...  .....+.+.+|+.++.+++||||+++++++..  ....++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            56777889999999999999975 4889999999754  23345689999999999999999999998865  5678999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.+++...
T Consensus        86 ~e~~~~~~L~~~l~~~  101 (279)
T 2w5a_A           86 MEYCEGGDLASVITKG  101 (279)
T ss_dssp             EECCTTEEHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHhh
Confidence            9999999999999753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.03  E-value=4.5e-10  Score=115.41  Aligned_cols=90  Identities=26%  Similarity=0.303  Sum_probs=72.8

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .+.|...+.||+|+||.||++.... ++.||||.++..  ...+.+.+|+.++.+++||||+++++++......++|+||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            4567888899999999999999764 789999999754  2346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++|+|.+++...
T Consensus       130 ~~~~~L~~~l~~~  142 (349)
T 2w4o_A          130 VTGGELFDRIVEK  142 (349)
T ss_dssp             CCSCBHHHHHTTC
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999999653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.03  E-value=7.1e-10  Score=110.50  Aligned_cols=89  Identities=25%  Similarity=0.400  Sum_probs=76.6

Q ss_pred             ccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +.....||+|+||.||++... ++..||+|.+........+.+.+|+.++..++||||+++++++...+..++|+||+++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            444468999999999999964 4789999999866555567899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      ++|.+++...
T Consensus       104 ~~L~~~l~~~  113 (295)
T 2clq_A          104 GSLSALLRSK  113 (295)
T ss_dssp             EEHHHHHHHT
T ss_pred             CCHHHHHHhh
Confidence            9999999753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.03  E-value=1.1e-09  Score=110.52  Aligned_cols=89  Identities=27%  Similarity=0.329  Sum_probs=77.3

Q ss_pred             cccc-cceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEec
Q 008046          474 NFAS-YNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~-~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .|.. .+.||+|+||.||++... +++.||||.++.......+.+.+|+.++.++ +||||+++++++...+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            3444 367999999999999864 5889999999866555677899999999885 799999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        93 ~~~~~L~~~l~~  104 (316)
T 2ac3_A           93 MRGGSILSHIHK  104 (316)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             CCCCcHHHHHhc
Confidence            999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.03  E-value=6.5e-10  Score=115.86  Aligned_cols=92  Identities=16%  Similarity=0.251  Sum_probs=80.5

Q ss_pred             cccccccceeccc--CceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEG--GFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G--~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...++||+|  +||.||++... +++.||||+++...  ....+.+.+|+.++.+++|||||++++++...+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3568888899999  99999999976 48999999997442  3345678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus       104 v~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             EEECCTTCBHHHHHHHT
T ss_pred             EEEccCCCCHHHHHhhh
Confidence            99999999999999653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.03  E-value=2.8e-10  Score=118.39  Aligned_cols=93  Identities=26%  Similarity=0.487  Sum_probs=79.4

Q ss_pred             cccccccceecccCceeEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA  541 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~  541 (579)
                      .++|...++||+|+||.||++...        .+..||||+++... ....+.+.+|++++.++ +||||+++++++...
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            356777889999999999999852        23579999997543 33457899999999999 999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhcCCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +..++|+||+++|+|.+++....
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~  170 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARR  170 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CceEEEEEecCCCcHHHHHHHhc
Confidence            99999999999999999997543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.03  E-value=4.4e-10  Score=113.92  Aligned_cols=90  Identities=22%  Similarity=0.350  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.++..   .....+.+.+|+.++..++||||+++++++......++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            56777889999999999999975 4889999999743   1234567889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        86 e~~~gg~L~~~l~~   99 (318)
T 1fot_A           86 DYIEGGELFSLLRK   99 (318)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHH
Confidence            99999999999964

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.02  E-value=4.2e-10  Score=114.47  Aligned_cols=90  Identities=24%  Similarity=0.381  Sum_probs=72.8

Q ss_pred             ccccccceecccCceeEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL----VEGQEIAVKRLSKGS----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++..    ..++.+|+|+++...    ......+.+|+.++.+++||||+++++++...+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            5678888999999999999986    358899999997542    22345788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++||||+++|+|.+++..
T Consensus        97 ~lv~e~~~~~~L~~~l~~  114 (327)
T 3a62_A           97 YLILEYLSGGELFMQLER  114 (327)
T ss_dssp             EEEEECCTTEEHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHh
Confidence            999999999999998864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.02  E-value=6.1e-10  Score=114.94  Aligned_cols=90  Identities=22%  Similarity=0.308  Sum_probs=79.3

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .++|...+.||+|+||.||++... .++.||+|.+.... ...+.+.+|+.++++++||||+++++++......++|+||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            356888889999999999999976 58899999997542 3346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus        98 ~~~~~L~~~l~~  109 (361)
T 3uc3_A           98 ASGGELYERICN  109 (361)
T ss_dssp             CCSCBHHHHHHH
T ss_pred             CCCCCHHHHHHh
Confidence            999999999854

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.02  E-value=3.5e-10  Score=115.28  Aligned_cols=93  Identities=28%  Similarity=0.510  Sum_probs=79.4

Q ss_pred             cccccccceecccCceeEEEEEec--------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV--------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA  541 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~  541 (579)
                      .++|...+.||+|+||.||++...        .+..||+|.++... ....+.+.+|+.++.++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            467888899999999999999863        36789999997543 33456899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhcCCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +..++|+||+++|+|.+++....
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~  136 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARR  136 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTS
T ss_pred             CceEEEEECCCCCcHHHHHHHhc
Confidence            99999999999999999997643

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.02  E-value=9.2e-10  Score=111.47  Aligned_cols=90  Identities=27%  Similarity=0.350  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      +.|...+.||+|+||.||++... +++.||+|.++....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            46777889999999999999975 488999999975422      13578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++++|.+++..
T Consensus        92 lv~e~~~~~~L~~~l~~  108 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQ  108 (321)
T ss_dssp             EEECCCCSCBHHHHHHT
T ss_pred             EEEEcCCCCcHHHHHHh
Confidence            99999999999999964

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.02  E-value=6e-10  Score=111.53  Aligned_cols=91  Identities=27%  Similarity=0.528  Sum_probs=78.1

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .+.|...+.||+|+||.||++.... +..+|+|.+........+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            3567778899999999999999864 889999999766556678999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|.+++..
T Consensus        98 ~~~~~l~~~~~~  109 (302)
T 2j7t_A           98 CPGGAVDAIMLE  109 (302)
T ss_dssp             CTTEEHHHHHHH
T ss_pred             CCCCcHHHHHHh
Confidence            999999998864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.02  E-value=7.4e-10  Score=111.17  Aligned_cols=90  Identities=21%  Similarity=0.331  Sum_probs=76.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++... +++.||+|.++.......+.+.+|+.++.+++||||+++++++......++|+||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            46777789999999999999975 58899999998654444567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        89 ~~~~L~~~l~~   99 (304)
T 2jam_A           89 SGGELFDRILE   99 (304)
T ss_dssp             CSCBHHHHHHH
T ss_pred             CCccHHHHHHH
Confidence            99999998853

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.01  E-value=1.1e-09  Score=108.58  Aligned_cols=90  Identities=27%  Similarity=0.374  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...+.||+|+||.||++... +++.+|+|.++....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45777789999999999999976 488999999874321      23678999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++++|.+++..
T Consensus        85 lv~e~~~~~~L~~~l~~  101 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE  101 (283)
T ss_dssp             EEEECCCSCBHHHHHHH
T ss_pred             EEEeecCCCcHHHHHHh
Confidence            99999999999999854

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.01  E-value=4.9e-10  Score=123.88  Aligned_cols=83  Identities=29%  Similarity=0.542  Sum_probs=72.1

Q ss_pred             eecccCceeEEEEEec---CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          480 KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       480 ~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      +||+|+||.||+|.+.   .+..||||.++... ....++|.+|+.+|.+++|||||++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999874   35679999998653 3456799999999999999999999999865 66899999999999


Q ss_pred             HHHHhcCC
Q 008046          556 LDFFIFDI  563 (579)
Q Consensus       556 L~~~l~~~  563 (579)
                      |.++|...
T Consensus       422 L~~~l~~~  429 (613)
T 2ozo_A          422 LHKFLVGK  429 (613)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHhhc
Confidence            99999653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.01  E-value=3.5e-10  Score=115.06  Aligned_cols=94  Identities=30%  Similarity=0.452  Sum_probs=80.1

Q ss_pred             HHhcccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEE
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ  540 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~  540 (579)
                      +...++|...+.||+|+||.||++....      ...||+|.+.... ....+.+.+|+.++.++ +||||+++++++..
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            3445678888999999999999998643      2479999997543 23456899999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .+..++|+||+++|+|.+++..
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~  143 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRR  143 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHH
T ss_pred             CCceEEEEecCCCCcHHHHHHH
Confidence            9999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.00  E-value=4.6e-10  Score=117.39  Aligned_cols=91  Identities=24%  Similarity=0.359  Sum_probs=78.4

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECC--eEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--ESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--~~~lV~  548 (579)
                      +.|...+.||+|+||.||++.... ++.||||+++... ....+.+.+|+.++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            467778899999999999999765 8899999997542 234678899999999999999999999988755  789999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus        89 e~~~~g~L~~~l~~~  103 (396)
T 4eut_A           89 EFCPCGSLYTVLEEP  103 (396)
T ss_dssp             CCCTTEEHHHHTTSG
T ss_pred             ecCCCCCHHHHHHhh
Confidence            999999999999753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.00  E-value=9.2e-10  Score=111.73  Aligned_cols=90  Identities=26%  Similarity=0.437  Sum_probs=78.2

Q ss_pred             ccccccceecccCceeEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-----VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~  545 (579)
                      ++|...+.||+|+||.||++.+     ..++.||||++........+.+.+|+.++.+++|+||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4677778999999999999984     3478999999987655566789999999999999999999999873  56689


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus       103 lv~e~~~~~~L~~~l~~  119 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQR  119 (327)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEeecCCCCHHHHHHh
Confidence            99999999999999864

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.00  E-value=5.2e-10  Score=113.60  Aligned_cols=91  Identities=32%  Similarity=0.572  Sum_probs=77.5

Q ss_pred             ccccccceecccCceeEEEEEe-----cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECC--eEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-----VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD--ESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~--~~~  545 (579)
                      ++|...+.||+|+||.||++.+     ..++.||||.+........+.|.+|+.++.+++|+||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4577778999999999999984     347899999998765566678999999999999999999999986543  679


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|+||+++|+|.+++...
T Consensus       121 lv~e~~~~~~L~~~l~~~  138 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKH  138 (326)
T ss_dssp             EEECCCTTCBHHHHHHHS
T ss_pred             EEEECCCCCCHHHHHHhc
Confidence            999999999999999753

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.00  E-value=5.5e-10  Score=116.20  Aligned_cols=90  Identities=19%  Similarity=0.343  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++|||||++++++...+..++|+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            567778899999999999999754 789999998643   2234578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        95 e~~~gg~L~~~l~~  108 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQ  108 (384)
T ss_dssp             CCCTTEEHHHHHHT
T ss_pred             ecCCCCcHHHHHHh
Confidence            99999999999965

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.00  E-value=7.7e-10  Score=113.91  Aligned_cols=90  Identities=22%  Similarity=0.273  Sum_probs=79.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++... .+..||+|.+... .....+.+.+|+.++.+++|+||+++++++...+..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            56888889999999999999976 4889999999754 233456899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.+++..
T Consensus       113 ~~~~~L~~~l~~  124 (360)
T 3eqc_A          113 MDGGSLDQVLKK  124 (360)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             CCCCCHHHHHHH
Confidence            999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.00  E-value=9e-10  Score=112.96  Aligned_cols=90  Identities=20%  Similarity=0.341  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|.++..   .....+.+.+|..++.++ +||||+++++++...+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            467777899999999999999764 889999999753   223345788999999987 899999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++|+|.+++..
T Consensus        89 ~e~~~gg~L~~~l~~  103 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQR  103 (345)
T ss_dssp             ECCCCSCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHHH
Confidence            999999999998864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.00  E-value=6.6e-10  Score=112.11  Aligned_cols=91  Identities=26%  Similarity=0.447  Sum_probs=77.0

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .++|...++||+|+||.||++...+++.||+|++....  ....+.+.+|+.++.+++||||+++++++......++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            35678888999999999999998889999999997442  2234688999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |++ |+|.+++...
T Consensus       100 ~~~-~~l~~~~~~~  112 (311)
T 3niz_A          100 FME-KDLKKVLDEN  112 (311)
T ss_dssp             CCS-EEHHHHHHTC
T ss_pred             CCC-CCHHHHHHhc
Confidence            997 5888888653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.00  E-value=5.3e-10  Score=121.28  Aligned_cols=92  Identities=26%  Similarity=0.478  Sum_probs=80.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++.+++||||+++++++......++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            56888889999999999999975 4899999999643   1234568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCC
Q 008046          549 EYMPNKSLDFFIFDID  564 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~~  564 (579)
                      ||+++|+|.++|....
T Consensus       265 E~~~gg~L~~~l~~~~  280 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVD  280 (543)
T ss_dssp             CCCTTCBHHHHHHTSS
T ss_pred             EeccCCCHHHHHHHhh
Confidence            9999999999997643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.00  E-value=6.4e-10  Score=109.48  Aligned_cols=89  Identities=29%  Similarity=0.552  Sum_probs=73.5

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS----GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +..+|||.++...    ....+.+.+|+.++..++||||+++++++...+..++|+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            46777789999999999999974 7899999987432    233568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus        86 e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           86 EFARGGPLNRVLSG   99 (271)
T ss_dssp             ECCTTEEHHHHHTS
T ss_pred             EcCCCCCHHHHhhc
Confidence            99999999999854

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.00  E-value=2.3e-10  Score=115.84  Aligned_cols=97  Identities=25%  Similarity=0.466  Sum_probs=82.1

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEec------CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      ++.+...++|...+.||+|+||.||++...      .+..||+|.+..... .....|.+|+.++.+++|+||+++++++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            344455678888899999999999999864      267899999975432 3455799999999999999999999999


Q ss_pred             EECCeEEEEEeccCCCCHHHHhcC
Q 008046          539 IQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       539 ~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ...+..++|+||+++|+|.+++..
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHH
Confidence            988899999999999999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.99  E-value=1e-09  Score=110.99  Aligned_cols=89  Identities=31%  Similarity=0.508  Sum_probs=75.7

Q ss_pred             ccccceecccCceeEEEEEec-----CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLV-----EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DESML  546 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~~l  546 (579)
                      |...++||+|+||.||++.+.     +++.||||+++... ....+.|.+|+.++.+++||||+++++++...  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            477789999999999888652     47889999997543 34456899999999999999999999999884  67899


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus       113 v~e~~~~~~L~~~l~~~  129 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH  129 (318)
T ss_dssp             EECCCTTCBHHHHGGGS
T ss_pred             EEecccCCcHHHHHhhC
Confidence            99999999999999653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.99  E-value=7.6e-10  Score=113.73  Aligned_cols=90  Identities=24%  Similarity=0.294  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++..++||||+++++++......++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            56778889999999999999975 4889999998643   1234568899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus       121 e~~~gg~L~~~l~~  134 (350)
T 1rdq_E          121 EYVAGGEMFSHLRR  134 (350)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             cCCCCCcHHHHHHH
Confidence            99999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.99  E-value=6.2e-10  Score=110.09  Aligned_cols=91  Identities=24%  Similarity=0.454  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+....   ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            56777889999999999999974 58899999996431   223468999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++++|.+++...
T Consensus        91 e~~~~~~L~~~l~~~  105 (278)
T 3cok_A           91 EMCHNGEMNRYLKNR  105 (278)
T ss_dssp             ECCTTEEHHHHHHTC
T ss_pred             ecCCCCcHHHHHhhc
Confidence            999999999999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.99  E-value=9.1e-10  Score=108.90  Aligned_cols=89  Identities=33%  Similarity=0.522  Sum_probs=77.5

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .++|...+.||+|+||.||++...++..||+|.++.. ....+.|.+|+.++.+++|+||+++++++. .+..++|+||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            3567778899999999999999887889999999754 234678999999999999999999999875 55689999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++++|.+++..
T Consensus        90 ~~~~L~~~l~~  100 (279)
T 1qpc_A           90 ENGSLVDFLKT  100 (279)
T ss_dssp             TTCBHHHHTTS
T ss_pred             CCCCHHHHHhc
Confidence            99999999964

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.99  E-value=1.1e-09  Score=108.55  Aligned_cols=91  Identities=24%  Similarity=0.385  Sum_probs=78.9

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .++|...+.||+|+||.||++.... ++.||+|.+...  .....+.+.+|+.++.+++||||+++++++......++|+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3578888899999999999998754 889999998643  2334567899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        85 e~~~~~~l~~~~~~   98 (284)
T 3kk8_A           85 DLVTGGELFEDIVA   98 (284)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999888754

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.98  E-value=1.3e-09  Score=109.10  Aligned_cols=90  Identities=31%  Similarity=0.551  Sum_probs=74.6

Q ss_pred             ccccccceecccCceeEEEEEe-----cCCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC--CeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-----VEGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--DES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--~~~  544 (579)
                      +.|...++||+|+||.||++.+     ..++.||+|.++.. .....+.+.+|+.++.+++|+||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3467778999999999999984     34789999999744 334567899999999999999999999999876  668


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++|+|.+++..
T Consensus       101 ~lv~e~~~~~~L~~~l~~  118 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPK  118 (302)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHh
Confidence            999999999999999954

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.98  E-value=8.6e-10  Score=113.47  Aligned_cols=91  Identities=30%  Similarity=0.442  Sum_probs=78.4

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...+.||+|+||.||++.... ++.||||+++..   .....+.+.+|..++..+ +||||+++++++...+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            4678888999999999999999754 889999999743   223456788999999988 79999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+++|+|.+++..
T Consensus       102 v~E~~~gg~L~~~l~~  117 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQK  117 (353)
T ss_dssp             EEECCCSCBHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHH
Confidence            9999999999998854

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.98  E-value=4.4e-10  Score=114.11  Aligned_cols=93  Identities=29%  Similarity=0.509  Sum_probs=77.3

Q ss_pred             cccccccceecccCceeEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      .++|...+.||+|+||.||++...      .+..||||.+... .......+.+|+.++.+++||||+++++++......
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            357888889999999999999842      3678999999744 334456899999999999999999999999998899


Q ss_pred             EEEEeccCCCCHHHHhcCCC
Q 008046          545 MLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ++|+||+++|+|.+++....
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~  128 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETR  128 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTS
T ss_pred             EEEEecCCCCcHHHHHHhhc
Confidence            99999999999999997543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.98  E-value=1.1e-09  Score=109.03  Aligned_cols=88  Identities=31%  Similarity=0.557  Sum_probs=74.1

Q ss_pred             cccccc-eecccCceeEEEEEec---CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          474 NFASYN-KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       474 ~f~~~~-~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++...+ .||+|+||.||++...   .+..||+|.++... ....+.+.+|+.++.+++||||+++++++ ..+..++|+
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~   88 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM   88 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence            344444 8999999999999863   47789999998643 34467899999999999999999999998 566789999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus        89 e~~~~~~L~~~l~~  102 (287)
T 1u59_A           89 EMAGGGPLHKFLVG  102 (287)
T ss_dssp             ECCTTEEHHHHHTT
T ss_pred             EeCCCCCHHHHHHh
Confidence            99999999999964

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.98  E-value=7.5e-10  Score=113.55  Aligned_cols=93  Identities=22%  Similarity=0.345  Sum_probs=79.0

Q ss_pred             HhcccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES  544 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~  544 (579)
                      ...++|...+.||+|+||.||++.... ++.||+|.++...   ....+.+..|..++..+ +||||+++++++...+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            345788888999999999999999764 8899999997431   23456788999999876 999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++||||+++|+|.+++..
T Consensus        94 ~lv~E~~~gg~L~~~l~~  111 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQS  111 (345)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.98  E-value=9.6e-10  Score=111.59  Aligned_cols=92  Identities=29%  Similarity=0.538  Sum_probs=76.2

Q ss_pred             ccccccceecccCceeEEEEEecC-CcE--EEEEEecCC-CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQE--IAVKRLSKG-SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~--vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++.... +..  +|+|.++.. .....+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            467777899999999999999754 554  599998754 233456799999999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCC
Q 008046          548 YEYMPNKSLDFFIFDID  564 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~~  564 (579)
                      +||+++|+|.+++....
T Consensus       105 ~e~~~~~~L~~~l~~~~  121 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSR  121 (327)
T ss_dssp             ECCCTTCBHHHHHHTTC
T ss_pred             EecCCCCCHHHHHHhcc
Confidence            99999999999997643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.97  E-value=6.9e-10  Score=117.76  Aligned_cols=91  Identities=23%  Similarity=0.382  Sum_probs=77.3

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .+.|...++||+|+||.||++... .++.+|+|.+....  ....+.+.+|+.++.+++|||||++++++...+..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            456788889999999999999864 58899999997542  233567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        90 E~~~gg~L~~~i~~  103 (444)
T 3soa_A           90 DLVTGGELFEDIVA  103 (444)
T ss_dssp             CCCBCCBHHHHHHH
T ss_pred             EeCCCCCHHHHHHH
Confidence            99999999988864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.97  E-value=5.9e-10  Score=112.12  Aligned_cols=92  Identities=28%  Similarity=0.424  Sum_probs=79.4

Q ss_pred             cccccccceecccCceeEEEEEe------cCCcEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCceeceeEEEEECCe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE  543 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~  543 (579)
                      .++|...+.||+|+||.||++..      ..++.||+|.++.... ...+.+.+|+.++.++ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            45677888999999999999984      2367899999975432 3457899999999999 99999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcCC
Q 008046          544 SMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      .++|+||+++|+|.+++...
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~  121 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRK  121 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHT
T ss_pred             cEEEEecCCCCCHHHHHHhc
Confidence            99999999999999999754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.97  E-value=7.5e-10  Score=113.15  Aligned_cols=94  Identities=29%  Similarity=0.457  Sum_probs=78.7

Q ss_pred             hcccccccceecccCceeEEEEEec------CCcEEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      ..++|...+.||+|+||.||++...      .+..||+|.+... .....+.+.+|+.++.++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            4567888899999999999999862      3567999999754 233457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcCCC
Q 008046          543 ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ..++||||+++|+|.+++....
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTT
T ss_pred             ccEEEEecCCCCcHHHHHhhcc
Confidence            9999999999999999997643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=114.06  Aligned_cols=89  Identities=25%  Similarity=0.244  Sum_probs=74.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++... +++.||||++....  ......+..|+..+.++ +|+||+++++++..+...++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            56888899999999999999976 58999999986432  23344666777666665 8999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+ +|+|.+++..
T Consensus       137 e~~-~~~L~~~~~~  149 (311)
T 3p1a_A          137 ELC-GPSLQQHCEA  149 (311)
T ss_dssp             ECC-CCBHHHHHHH
T ss_pred             ecc-CCCHHHHHHh
Confidence            999 7799998865

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.97  E-value=1.4e-09  Score=109.46  Aligned_cols=90  Identities=26%  Similarity=0.413  Sum_probs=78.1

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...++||+|+||.||++.... ++.||+|++.....  ...+.+.+|+.++.+++||||+++++++...+..++|+|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            467777899999999999999754 88999999865422  234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus        83 ~~~~~~l~~~~~~   95 (311)
T 4agu_A           83 YCDHTVLHELDRY   95 (311)
T ss_dssp             CCSEEHHHHHHHT
T ss_pred             eCCCchHHHHHhh
Confidence            9999999988764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.97  E-value=9.5e-10  Score=111.24  Aligned_cols=89  Identities=27%  Similarity=0.477  Sum_probs=65.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++... +++.||+|.++... ....+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            46777789999999999999865 48899999997543 23457889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      ++ |+|.+++..
T Consensus        85 ~~-~~L~~~l~~   95 (317)
T 2pmi_A           85 MD-NDLKKYMDS   95 (317)
T ss_dssp             CC-CBHHHHHHH
T ss_pred             cC-CCHHHHHHh
Confidence            98 699998854

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.97  E-value=1.1e-09  Score=119.19  Aligned_cols=92  Identities=28%  Similarity=0.461  Sum_probs=80.2

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...+.||+|+||.||++... +++.||+|.+...   .......+.+|+.++.+++|||||++++++...+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            356888889999999999999975 4899999999643   123456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.+++...
T Consensus       263 mEy~~gg~L~~~l~~~  278 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHM  278 (576)
T ss_dssp             ECCCCSCBHHHHHHSS
T ss_pred             EEcCCCCcHHHHHHhc
Confidence            9999999999999754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.97  E-value=5.9e-10  Score=113.66  Aligned_cols=90  Identities=31%  Similarity=0.530  Sum_probs=76.4

Q ss_pred             cccccceecccCceeEEEEEecC-----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .|...+.||+|+||.||++....     +..||||.++... ......|.+|+.++.+++||||+++++++...+..++|
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  124 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII  124 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence            45566899999999999998653     2359999997542 33456899999999999999999999999988999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.+++...
T Consensus       125 ~e~~~~~~L~~~l~~~  140 (333)
T 1mqb_A          125 TEYMENGALDKFLREK  140 (333)
T ss_dssp             EECCTTEEHHHHHHHT
T ss_pred             EeCCCCCcHHHHHHhC
Confidence            9999999999999653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.97  E-value=8.8e-10  Score=115.10  Aligned_cols=91  Identities=19%  Similarity=0.321  Sum_probs=76.9

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...++||+|+||.||++.... ++.+|+|+++...   ....+.+.+|..++.++ +|||||++++++...+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            3568888899999999999999765 7889999997532   22335688999999887 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+++|+|..++..
T Consensus       131 V~E~~~gg~L~~~l~~  146 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQR  146 (396)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEEcCCCCcHHHHHHH
Confidence            9999999999998864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.97  E-value=1.1e-09  Score=108.98  Aligned_cols=89  Identities=24%  Similarity=0.409  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++....++.+|+|++.....  ...+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            35677789999999999999987799999999964422  2346889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++ +|.+++..
T Consensus        82 ~~~-~l~~~~~~   92 (288)
T 1ob3_A           82 LDQ-DLKKLLDV   92 (288)
T ss_dssp             CSE-EHHHHHHT
T ss_pred             cCC-CHHHHHHh
Confidence            974 99988864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.97  E-value=2.1e-09  Score=107.68  Aligned_cols=90  Identities=22%  Similarity=0.413  Sum_probs=79.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++.+++|+||+++++++......++|+||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            45777789999999999999864 48899999997543 34567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|.+++..
T Consensus       102 ~~~~~L~~~~~~  113 (303)
T 3a7i_A          102 LGGGSALDLLEP  113 (303)
T ss_dssp             CTTEEHHHHHTT
T ss_pred             CCCCcHHHHHhc
Confidence            999999999854

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.97  E-value=1.7e-09  Score=116.89  Aligned_cols=91  Identities=26%  Similarity=0.346  Sum_probs=76.5

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc-------------ccHHHHHHHHHHHhcCCCCceeceeEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG-------------QGMEEFKNEVTLIARLQHRNLVKLLGC  537 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~nlv~l~g~  537 (579)
                      .+.|...++||+|+||.||++.... +..+|+|.+.....             ...+.+.+|+.++.+++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            4678888999999999999999764 78999999974321             235689999999999999999999999


Q ss_pred             EEECCeEEEEEeccCCCCHHHHhcC
Q 008046          538 CIQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       538 ~~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +......++|+||+++|+|.+++..
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~  139 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIIN  139 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHH
Confidence            9999999999999999999988854

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.96  E-value=5.4e-10  Score=113.14  Aligned_cols=93  Identities=27%  Similarity=0.498  Sum_probs=71.4

Q ss_pred             HhcccccccceecccCceeEEEEEecCC----cEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVEG----QEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~g----~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      ...++|...+.||+|+||.||++.....    ..||||.++..  .....+.|.+|+.++.+++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            3456788889999999999999987542    27999999754  33456789999999999999999999999987665


Q ss_pred             E------EEEEeccCCCCHHHHhcC
Q 008046          544 S------MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~------~lV~Ey~~~GsL~~~l~~  562 (579)
                      .      ++|+||+++|+|.+++..
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~  124 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLA  124 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHH
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHh
Confidence            4      899999999999999854

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.96  E-value=1e-09  Score=108.67  Aligned_cols=91  Identities=27%  Similarity=0.391  Sum_probs=78.3

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...+.||+|+||.||++.... +..||+|.+....   ....+.+.+|+.++.+++||||+++++++......++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4567778899999999999998755 6789999986431   22356799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++|+|.+++..
T Consensus        88 ~e~~~~~~l~~~l~~  102 (279)
T 3fdn_A           88 LEYAPLGTVYRELQK  102 (279)
T ss_dssp             ECCCTTEEHHHHHHH
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999998854

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.96  E-value=8.5e-10  Score=110.38  Aligned_cols=89  Identities=21%  Similarity=0.328  Sum_probs=71.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--------------------------ccHHHHHHHHHHHhc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--------------------------QGMEEFKNEVTLIAR  525 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--------------------------~~~~~f~~E~~~l~~  525 (579)
                      ++|...+.||+|+||.||++... +++.||||.+.....                          ...+.+.+|+.++.+
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            56778889999999999999865 488999999864321                          113568999999999


Q ss_pred             CCCCceeceeEEEEE--CCeEEEEEeccCCCCHHHHhc
Q 008046          526 LQHRNLVKLLGCCIQ--ADESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       526 l~H~nlv~l~g~~~~--~~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ++||||+++++++..  ....++||||+++|+|.+++.
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  130 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT  130 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh
Confidence            999999999999986  567899999999999887653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.96  E-value=1.6e-09  Score=106.85  Aligned_cols=90  Identities=24%  Similarity=0.395  Sum_probs=78.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            56777789999999999999976 5889999998643   1234568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus        91 e~~~~~~L~~~l~~  104 (276)
T 2h6d_A           91 EYVSGGELFDYICK  104 (276)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             eccCCCcHHHHHhc
Confidence            99999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.96  E-value=1.7e-09  Score=107.83  Aligned_cols=90  Identities=20%  Similarity=0.268  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..++|+
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            567777899999999999999764 788999998643   2234568899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus        95 e~~~~~~L~~~~~~  108 (294)
T 2rku_A           95 ELCRRRSLLELHKR  108 (294)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999998853

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.96  E-value=1.3e-09  Score=117.37  Aligned_cols=90  Identities=24%  Similarity=0.285  Sum_probs=74.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +.|...++||+|+||.||++... .+..+|+|.+....  ....+.+.+|+.++..++|||||++++++......++|+|
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45777889999999999999975 48899999997542  3345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus       117 ~~~~g~L~~~~~~  129 (494)
T 3lij_A          117 CYKGGELFDEIIH  129 (494)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999888753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.96  E-value=9.5e-10  Score=109.25  Aligned_cols=90  Identities=33%  Similarity=0.606  Sum_probs=74.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCccc-------HHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQG-------MEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~-------~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+.......       .+.+.+|+.++.+++|+||+++++++....  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            56777789999999999999974 58899999986432211       268999999999999999999999885544  


Q ss_pred             EEEEeccCCCCHHHHhcCCC
Q 008046          545 MLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ++|+||+++|+|.+++....
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~  116 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKA  116 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTT
T ss_pred             eEEEEecCCCCHHHHHhccc
Confidence            69999999999999987543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.96  E-value=9.3e-10  Score=117.72  Aligned_cols=90  Identities=22%  Similarity=0.389  Sum_probs=78.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +|+.||||.+....   ....+.+.+|+.++..++||||+++++++...+..++|+
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            46777789999999999999975 58999999996431   123567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        96 E~~~gg~L~~~l~~  109 (476)
T 2y94_A           96 EYVSGGELFDYICK  109 (476)
T ss_dssp             ECCSSEEHHHHTTS
T ss_pred             eCCCCCcHHHHHHh
Confidence            99999999999964

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.95  E-value=1.4e-09  Score=107.26  Aligned_cols=90  Identities=26%  Similarity=0.315  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++..++|+||+++++++...+..++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            56777889999999999999975 58899999986432 23457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++++|.+++..
T Consensus        87 ~~~~~L~~~l~~   98 (276)
T 2yex_A           87 CSGGELFDRIEP   98 (276)
T ss_dssp             CTTEEGGGGSBT
T ss_pred             cCCCcHHHHHhh
Confidence            999999998864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.95  E-value=2.1e-09  Score=109.22  Aligned_cols=83  Identities=28%  Similarity=0.262  Sum_probs=73.5

Q ss_pred             cceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEeccCCCC
Q 008046          478 YNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYEYMPNKS  555 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~Ey~~~Gs  555 (579)
                      .+.||+|+||.||++.... ++.||||.+..   .....+.+|+.++..+. ||||+++++++......++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            3689999999999999754 88999999964   34567889999999997 9999999999999999999999999999


Q ss_pred             HHHHhcCC
Q 008046          556 LDFFIFDI  563 (579)
Q Consensus       556 L~~~l~~~  563 (579)
                      |.+++...
T Consensus        93 L~~~l~~~  100 (325)
T 3kn6_A           93 LFERIKKK  100 (325)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            99999653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.95  E-value=1.9e-09  Score=107.56  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=78.1

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---------cccHHHHHHHHHHHhcCC-CCceeceeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---------GQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQ  540 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~  540 (579)
                      .++|...+.||+|+||.||++... +++.||||.++...         ....+.+.+|+.++.++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            457888889999999999999975 48899999997442         112357889999999995 9999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ....++|+||+++++|.+++..
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~  117 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTE  117 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH
T ss_pred             CCeEEEEEeccCCCcHHHHHhc
Confidence            9999999999999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.94  E-value=2.1e-09  Score=115.49  Aligned_cols=91  Identities=31%  Similarity=0.327  Sum_probs=79.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...+.||+|+||.||++... .++.||||++....   ....+.+.+|+.++.+++||||+++++++......++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            45777789999999999999976 58899999996432   345678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus       106 e~~~~~~L~~~~~~~  120 (484)
T 3nyv_A          106 EVYTGGELFDEIISR  120 (484)
T ss_dssp             CCCCSCBHHHHHHTC
T ss_pred             ecCCCCCHHHHHHhc
Confidence            999999999988653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.94  E-value=1.5e-09  Score=111.53  Aligned_cols=89  Identities=24%  Similarity=0.463  Sum_probs=76.0

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...+.||+|+||.||++.. .+++.||||++.....   ...+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4577778999999999999996 4588999999975422   23457999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||++ |+|.+++..
T Consensus       134 e~~~-g~l~~~l~~  146 (348)
T 1u5q_A          134 EYCL-GSASDLLEV  146 (348)
T ss_dssp             ECCS-EEHHHHHHH
T ss_pred             ecCC-CCHHHHHHH
Confidence            9997 788888753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.94  E-value=8.9e-10  Score=110.94  Aligned_cols=87  Identities=26%  Similarity=0.504  Sum_probs=74.4

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...+.||+|+||.||++... ++.||+|.+...  ...+.|.+|+.++.+++||||+++++++.  +..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            45666789999999999999874 688999998643  34578999999999999999999999875  45789999999


Q ss_pred             CCCHHHHhcCCC
Q 008046          553 NKSLDFFIFDID  564 (579)
Q Consensus       553 ~GsL~~~l~~~~  564 (579)
                      +|+|.+++....
T Consensus        83 ~~~L~~~l~~~~   94 (307)
T 2eva_A           83 GGSLYNVLHGAE   94 (307)
T ss_dssp             TCBHHHHHHCSS
T ss_pred             CCCHHHHHhccC
Confidence            999999997543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.94  E-value=6.1e-10  Score=118.37  Aligned_cols=90  Identities=23%  Similarity=0.269  Sum_probs=69.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... .++.||||.++..   .......+.+|+.++.+++||||+++++++...+..++||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            56788889999999999999865 4889999999742   2334567889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus       228 e~~~~~~L~~~l~~  241 (446)
T 4ejn_A          228 EYANGGELFFHLSR  241 (446)
T ss_dssp             CCCSSCBHHHHHHH
T ss_pred             eeCCCCcHHHHHHh
Confidence            99999999998854

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.94  E-value=7e-10  Score=114.56  Aligned_cols=90  Identities=23%  Similarity=0.240  Sum_probs=76.9

Q ss_pred             HhcccccccceecccCceeEEEEE------ecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC---CCceeceeEEEEE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGT------LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ---HRNLVKLLGCCIQ  540 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~------~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~nlv~l~g~~~~  540 (579)
                      ...+.|...++||+|+||.||++.      ...++.||||+++..   ...++..|+.++..++   |+|++++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345678888899999999999994      345788999999753   3567888998888887   9999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .+..+|||||+++|+|.++|..
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~  160 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINL  160 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHH
T ss_pred             CCCcEEEEeccCCCcHHHHHHH
Confidence            9999999999999999999964

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.94  E-value=1.1e-09  Score=115.37  Aligned_cols=91  Identities=19%  Similarity=0.311  Sum_probs=74.7

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCCC--------cccHHHHHHHHHHHhcCCCCceeceeEEEEEC
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--------GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA  541 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~  541 (579)
                      ..++|...+.||+|+||.||++.... ++.||||.+....        ......+.+|+.++.+++||||+++++++ ..
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DA  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE-ES
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE-ec
Confidence            34678888999999999999998754 7899999986421        11223588999999999999999999997 45


Q ss_pred             CeEEEEEeccCCCCHHHHhcC
Q 008046          542 DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +..++||||+++|+|.+++..
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~  232 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVG  232 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSS
T ss_pred             CceEEEEEcCCCCcHHHHHhc
Confidence            668999999999999998864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.94  E-value=1.9e-09  Score=109.83  Aligned_cols=91  Identities=20%  Similarity=0.264  Sum_probs=78.8

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            3567777899999999999999765 788999998643   223456899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++++|.+++..
T Consensus       120 ~e~~~~~~L~~~~~~  134 (335)
T 2owb_A          120 LELCRRRSLLELHKR  134 (335)
T ss_dssp             ECCCTTCBHHHHHHH
T ss_pred             EecCCCCCHHHHHhc
Confidence            999999999998854

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.94  E-value=1.2e-09  Score=110.07  Aligned_cols=102  Identities=25%  Similarity=0.434  Sum_probs=83.1

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEe------cCCcEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCceece
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGSG-QGMEEFKNEVTLIARL-QHRNLVKL  534 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~nlv~l  534 (579)
                      +...+.....++|...+.||+|+||.||++..      ..++.||||.++.... ...+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            34445555667888889999999999999974      2367899999975432 3456899999999999 79999999


Q ss_pred             eEEEEECC-eEEEEEeccCCCCHHHHhcCCC
Q 008046          535 LGCCIQAD-ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       535 ~g~~~~~~-~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ++++...+ ..++|+||+++|+|.+++....
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  127 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  127 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCT
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcc
Confidence            99987754 5899999999999999997643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.94  E-value=6.4e-10  Score=112.05  Aligned_cols=97  Identities=29%  Similarity=0.533  Sum_probs=75.1

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEecC----CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEE
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCI  539 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~  539 (579)
                      +++....++|...+.||+|+||.||++....    +..||+|.++..  .....+.|.+|+.++.+++||||+++++++.
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~  106 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI  106 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence            4444455678888899999999999998643    447999998744  2334568999999999999999999999988


Q ss_pred             ECCe-----EEEEEeccCCCCHHHHhcC
Q 008046          540 QADE-----SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       540 ~~~~-----~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ....     .++|+||+++|+|.+++..
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~  134 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLY  134 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHH
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHH
Confidence            7543     4999999999999999853

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.93  E-value=1e-09  Score=113.07  Aligned_cols=98  Identities=21%  Similarity=0.329  Sum_probs=82.0

Q ss_pred             HHHHHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCc-----------ccHHHHHHHHHHHhcCCCCceec
Q 008046          465 FASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG-----------QGMEEFKNEVTLIARLQHRNLVK  533 (579)
Q Consensus       465 ~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~-----------~~~~~f~~E~~~l~~l~H~nlv~  533 (579)
                      ..++....++|...+.||+|+||.||++...++..||||++.....           ...+.+.+|+.++.+++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            4677788899999999999999999999988899999999863211           11368999999999999999999


Q ss_pred             eeEEEEEC-----CeEEEEEeccCCCCHHHHhcCC
Q 008046          534 LLGCCIQA-----DESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       534 l~g~~~~~-----~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +++++...     ...++|+||++ |+|.+++...
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~  127 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ  127 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc
Confidence            99998653     35799999997 7898888753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.93  E-value=2.2e-09  Score=108.01  Aligned_cols=91  Identities=16%  Similarity=0.193  Sum_probs=79.2

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      .++|...+.||+|+||.||++... +++.||+|.+.....   ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            367888899999999999999975 488999999975422   2246799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      +||+++++|.+++..
T Consensus       113 ~e~~~~~~L~~~l~~  127 (309)
T 2h34_A          113 MRLINGVDLAAMLRR  127 (309)
T ss_dssp             EECCCCEEHHHHHHH
T ss_pred             EEecCCCCHHHHHHh
Confidence            999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.93  E-value=6.3e-10  Score=112.14  Aligned_cols=90  Identities=21%  Similarity=0.260  Sum_probs=75.6

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECC----eE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD----ES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~----~~  544 (579)
                      ++|...+.||+|+||.||++.. .+++.||||+++....   ...+.|.+|+.++.+++||||+++++++....    ..
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            5677788999999999999996 4588999999975422   23457899999999999999999999987643    34


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++||||+++|+|.+++..
T Consensus        92 ~lv~e~~~g~~L~~~l~~  109 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHT  109 (311)
T ss_dssp             EEEEECCCEEEHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.93  E-value=9.8e-10  Score=111.32  Aligned_cols=100  Identities=29%  Similarity=0.520  Sum_probs=83.1

Q ss_pred             cCHHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEE
Q 008046          463 FDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ  540 (579)
Q Consensus       463 ~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~  540 (579)
                      +++.++....+.|...+.||+|+||.||++... +++.||+|.+... ....+.+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            444455556778988899999999999999974 5889999999754 23457899999999998 89999999999987


Q ss_pred             ------CCeEEEEEeccCCCCHHHHhcCC
Q 008046          541 ------ADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       541 ------~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                            ....++|+||+++|+|.+++...
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhc
Confidence                  46789999999999999999653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.93  E-value=2.6e-09  Score=106.25  Aligned_cols=89  Identities=26%  Similarity=0.372  Sum_probs=74.8

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE----CCeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----ADESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----~~~~~l  546 (579)
                      .|...+.||+|+||.||++.... +..||+|.+...  .....+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            35666789999999999998754 788999998743  23445689999999999999999999999875    356899


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++|+|.+++..
T Consensus       107 v~e~~~~~~L~~~l~~  122 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKR  122 (290)
T ss_dssp             EEECCCSCBHHHHHHH
T ss_pred             EEEecCCCCHHHHHHH
Confidence            9999999999999964

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.93  E-value=1.1e-09  Score=109.20  Aligned_cols=89  Identities=26%  Similarity=0.431  Sum_probs=73.3

Q ss_pred             ccccccc-eecccCceeEEEEEec---CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYN-KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~-~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      +.|...+ .||+|+||.||++...   .+..||||.++...  ....++|.+|+.++.+++||||+++++++ ..+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            4566556 8999999999999643   26789999997542  22356899999999999999999999998 6677899


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++++|.+++..
T Consensus        95 v~e~~~~~~L~~~l~~  110 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQ  110 (291)
T ss_dssp             EEECCTTEEHHHHHHH
T ss_pred             EEEeCCCCCHHHHHHh
Confidence            9999999999999965

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.93  E-value=1.3e-09  Score=110.85  Aligned_cols=90  Identities=30%  Similarity=0.562  Sum_probs=71.5

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...+.||+|+||.||++.... ++    .||+|.+... .....++|.+|+.++.+++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            457777899999999999998643 33    4688888643 3345678999999999999999999999998754 778


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus        94 v~e~~~~g~L~~~l~~~  110 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREH  110 (327)
T ss_dssp             EEECCTTCBHHHHHHHS
T ss_pred             EEEecCCCcHHHHHHhc
Confidence            99999999999999753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.93  E-value=1.5e-09  Score=111.64  Aligned_cols=105  Identities=25%  Similarity=0.298  Sum_probs=88.2

Q ss_pred             ccccccCHHHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-----CCce
Q 008046          458 MELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-----HRNL  531 (579)
Q Consensus       458 ~~~~~~~~~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~nl  531 (579)
                      .+...+++++.....++|...++||+|+||.||++... +++.||||+++.. ....+.+..|+.++.+++     |+||
T Consensus        20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            34455666666667788999999999999999999974 4889999999743 344567888999999986     9999


Q ss_pred             eceeEEEEECCeEEEEEeccCCCCHHHHhcCCC
Q 008046          532 VKLLGCCIQADESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       532 v~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +++++++...+..++||||+ +++|.+++....
T Consensus        99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  130 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN  130 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT
T ss_pred             ecccceeeECCeeEEEEcCC-CCCHHHHHHhcC
Confidence            99999999999999999999 999999997543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.93  E-value=5e-10  Score=114.57  Aligned_cols=87  Identities=25%  Similarity=0.424  Sum_probs=76.6

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcc---c--------------HHHHHHHHHHHhcCCCCceece
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQ---G--------------MEEFKNEVTLIARLQHRNLVKL  534 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~---~--------------~~~f~~E~~~l~~l~H~nlv~l  534 (579)
                      .++|...+.||+|+||.||++.. +++.||+|.+......   .              .+.|.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35788888999999999999998 8899999998643111   1              1789999999999999999999


Q ss_pred             eEEEEECCeEEEEEeccCCCCHHHH
Q 008046          535 LGCCIQADESMLIYEYMPNKSLDFF  559 (579)
Q Consensus       535 ~g~~~~~~~~~lV~Ey~~~GsL~~~  559 (579)
                      ++++...+..++||||+++|+|.++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHH
Confidence            9999999999999999999999998

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.92  E-value=2.8e-09  Score=106.26  Aligned_cols=88  Identities=24%  Similarity=0.435  Sum_probs=74.3

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...++||+|+||.||++.... ++.||+|++....  ....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            457777899999999999999754 8899999997542  2334688999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhc
Q 008046          550 YMPNKSLDFFIF  561 (579)
Q Consensus       550 y~~~GsL~~~l~  561 (579)
                      |+++ +|.+++.
T Consensus        82 ~~~~-~l~~~~~   92 (292)
T 3o0g_A           82 FCDQ-DLKKYFD   92 (292)
T ss_dssp             CCSE-EHHHHHH
T ss_pred             cCCC-CHHHHHH
Confidence            9975 6665554

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.92  E-value=2e-09  Score=107.47  Aligned_cols=90  Identities=24%  Similarity=0.434  Sum_probs=76.9

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE----------
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----------  540 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----------  540 (579)
                      .++|...+.||+|+||.||++... +++.||+|.+... ....+.+.+|+.++.+++|||++++++++..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            356778889999999999999974 5889999999642 3445789999999999999999999998865          


Q ss_pred             ---CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 ---ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 ---~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                         ....++|+||+++|+|.+++..
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~  108 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHS  108 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHH
T ss_pred             cccCCceEEEEecCCCCCHHHhhhc
Confidence               3467999999999999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.92  E-value=1.7e-09  Score=116.25  Aligned_cols=90  Identities=27%  Similarity=0.337  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      +.|...++||+|+||.||++... .++.||||++...  .....+.+.+|+.++.+++||||+++++++......++|+|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            46777889999999999999975 5889999998633  23346789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.+++..
T Consensus       102 ~~~~~~L~~~~~~  114 (486)
T 3mwu_A          102 LYTGGELFDEIIK  114 (486)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999988854

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.92  E-value=1.8e-09  Score=111.09  Aligned_cols=91  Identities=25%  Similarity=0.309  Sum_probs=79.0

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...+.||+|+||.||++.... ++.||+|.++..   .....+.+..|..++..+ +||+|+++++++...+..++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4678888999999999999999865 788999999743   123456789999999988 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+++|+|.+++..
T Consensus        99 v~E~~~gg~L~~~l~~  114 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQ  114 (353)
T ss_dssp             EEECCCSCBHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHh
Confidence            9999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.92  E-value=1.4e-09  Score=111.10  Aligned_cols=89  Identities=24%  Similarity=0.390  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.. ..++.||+|.+...   .....+.+.+|+.++..++||||+++++++......++|+
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5677788999999999999997 45889999998642   1223457899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+ +|+|.+++..
T Consensus        89 E~~-~g~l~~~l~~  101 (336)
T 3h4j_B           89 EYA-GGELFDYIVE  101 (336)
T ss_dssp             CCC-CEEHHHHHHH
T ss_pred             ECC-CCcHHHHHHH
Confidence            999 7899988854

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.92  E-value=3.1e-09  Score=105.61  Aligned_cols=91  Identities=26%  Similarity=0.335  Sum_probs=79.8

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .++|...+.||+|+||.||++... +++.||+|.+...  .....+.+.+|+.++.+++||||+++++++......++|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            357888899999999999999975 5889999998643  2345678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++++|.+++..
T Consensus       101 e~~~~~~L~~~l~~  114 (287)
T 2wei_A          101 ELYTGGELFDEIIK  114 (287)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             EccCCCCHHHHHHh
Confidence            99999999988854

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.91  E-value=4e-09  Score=105.31  Aligned_cols=87  Identities=23%  Similarity=0.422  Sum_probs=72.2

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCceeceeEEEEEC----CeEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR--LQHRNLVKLLGCCIQA----DESM  545 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~nlv~l~g~~~~~----~~~~  545 (579)
                      .++|...+.||+|+||.||++.. +++.||||++..   ...+.+..|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            35678888999999999999987 688999999864   344567777777766  7999999999987653    4578


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        83 lv~e~~~~g~L~~~l~~   99 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL   99 (301)
T ss_dssp             EEECCCTTCBHHHHHTT
T ss_pred             EehhhccCCCHHHHHhh
Confidence            99999999999999953

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.91  E-value=2e-09  Score=106.74  Aligned_cols=90  Identities=23%  Similarity=0.359  Sum_probs=78.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.... +..||+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..++|+
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            567778899999999999999754 778999998643   1223568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        94 e~~~~~~L~~~l~~  107 (284)
T 2vgo_A           94 EFAPRGELYKELQK  107 (284)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             EeCCCCcHHHHHHh
Confidence            99999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.91  E-value=2.9e-09  Score=107.23  Aligned_cols=89  Identities=27%  Similarity=0.493  Sum_probs=74.0

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ..+.|...+.||+|+||.||++.... ++.||+|.+...  ...+.+.+|+.++.+++||||+++++++......++|+|
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            34578888899999999999999764 889999999753  235789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhc
Q 008046          550 YMPNKSLDFFIF  561 (579)
Q Consensus       550 y~~~GsL~~~l~  561 (579)
                      |+++|+|.+++.
T Consensus       105 ~~~~~~L~~~~~  116 (314)
T 3com_A          105 YCGAGSVSDIIR  116 (314)
T ss_dssp             CCTTEEHHHHHH
T ss_pred             cCCCCCHHHHHH
Confidence            999999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.91  E-value=3.8e-09  Score=109.15  Aligned_cols=94  Identities=16%  Similarity=0.271  Sum_probs=80.0

Q ss_pred             HHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--------ccHHHHHHHHHHHhcC-CCCceeceeEEE
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--------QGMEEFKNEVTLIARL-QHRNLVKLLGCC  538 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~nlv~l~g~~  538 (579)
                      ....++|...+.||+|+||.||++... +|+.||||++.....        ...+.+.+|+.++.++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            344567888899999999999999985 589999999875421        1135688999999999 799999999999


Q ss_pred             EECCeEEEEEeccCCCCHHHHhcC
Q 008046          539 IQADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       539 ~~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ......++||||+++|+|.+++.+
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~  193 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTE  193 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHH
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHh
Confidence            999999999999999999999864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.90  E-value=2.1e-09  Score=119.16  Aligned_cols=83  Identities=28%  Similarity=0.458  Sum_probs=70.9

Q ss_pred             ceecccCceeEEEEEec---CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLV---EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ++||+|+||.||+|.+.   .+..||||+++...  ....++|.+|+.+|.+++|||||++++++. .+..+|||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            47999999999999753   35789999997542  234678999999999999999999999985 4568899999999


Q ss_pred             CCHHHHhcC
Q 008046          554 KSLDFFIFD  562 (579)
Q Consensus       554 GsL~~~l~~  562 (579)
                      |+|.++|..
T Consensus       454 g~L~~~l~~  462 (635)
T 4fl3_A          454 GPLNKYLQQ  462 (635)
T ss_dssp             EEHHHHHHH
T ss_pred             CCHHHHHhh
Confidence            999999964

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.90  E-value=9.4e-10  Score=114.07  Aligned_cols=89  Identities=30%  Similarity=0.546  Sum_probs=73.7

Q ss_pred             ccccceecccCceeEEEEEecC--C--cEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEEEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE--G--QEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESMLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~--g--~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~lV~  548 (579)
                      |...+.||+|+||.||++...+  +  ..||||.++... ....+.|.+|+.++.+++||||++++++|.. .+..++|+
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            4556789999999999998642  2  368999987542 3446789999999999999999999999865 45788999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|.+++...
T Consensus       171 e~~~~g~L~~~l~~~  185 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNE  185 (373)
T ss_dssp             ECCTTCBHHHHHHCT
T ss_pred             ECCCCCCHHHHHhhc
Confidence            999999999999753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.90  E-value=2.3e-09  Score=106.20  Aligned_cols=91  Identities=23%  Similarity=0.352  Sum_probs=75.8

Q ss_pred             cccccccceecccCceeEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...+.||+|+||.||++....    +..||+|.++... ....+.|.+|+.++.+++||||+++++++ ..+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence            3567777899999999999998743    4579999987543 33456899999999999999999999987 4567889


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus        93 v~e~~~~~~L~~~l~~~  109 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVR  109 (281)
T ss_dssp             EEECCTTEEHHHHHHHT
T ss_pred             EEecCCCCCHHHHHHhc
Confidence            99999999999999643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.90  E-value=3e-09  Score=108.15  Aligned_cols=90  Identities=26%  Similarity=0.466  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...+.||+|+||.||++.... ++.||+|++.....  ...+.+.+|+.++.+++||||+++++++......++|+|
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            467777899999999999999765 88999999865432  234568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++++|.+++..
T Consensus       105 ~~~~~~l~~~~~~  117 (331)
T 4aaa_A          105 FVDHTILDDLELF  117 (331)
T ss_dssp             CCSEEHHHHHHHS
T ss_pred             cCCcchHHHHHhh
Confidence            9999999888654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.90  E-value=2.2e-09  Score=109.16  Aligned_cols=93  Identities=29%  Similarity=0.456  Sum_probs=76.1

Q ss_pred             HhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ...++|...++||+|+||.||++... +++.||||+++....  ...+.+.+|+.++.+++||||+++++++......++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            34467888899999999999999864 588999999975422  234578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||++ |+|.+++...
T Consensus       111 v~e~~~-~~L~~~~~~~  126 (329)
T 3gbz_A          111 IFEYAE-NDLKKYMDKN  126 (329)
T ss_dssp             EEECCS-EEHHHHHHHC
T ss_pred             EEecCC-CCHHHHHhhc
Confidence            999997 5999998643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.89  E-value=9.3e-10  Score=110.04  Aligned_cols=92  Identities=20%  Similarity=0.320  Sum_probs=65.1

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ..++|...+.||+|+||.||++... +++.||||.+.... ....+++.+|+.++.+++||||+++++++...+..++|+
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            3467888899999999999999864 58899999986432 334568899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        93 e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           93 KLLSGGSVLDIIKH  106 (303)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             hhccCCchHHHHHH
Confidence            99999999999863

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.89  E-value=2.8e-09  Score=107.28  Aligned_cols=89  Identities=24%  Similarity=0.411  Sum_probs=71.8

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEE------------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI------------  539 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~------------  539 (579)
                      ++|...+.||+|+||.||++.... ++.||+|++........+.+.+|+.++.+++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            467778899999999999999865 8899999998665566778999999999999999999998873            


Q ss_pred             --ECCeEEEEEeccCCCCHHHHhcC
Q 008046          540 --QADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       540 --~~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                        .....++|+||++ |+|.+++..
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             ccccCceeEEeeccC-CCHHHHhhc
Confidence              3467899999997 699999854

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.89  E-value=1.8e-09  Score=107.79  Aligned_cols=91  Identities=29%  Similarity=0.481  Sum_probs=74.6

Q ss_pred             ccccccceecccCceeEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEE-CCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-ADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-~~~~~l  546 (579)
                      ..|...+.||+|+||.||++...+    ...+|+|.+.... ....+.+.+|+.++.+++||||+++++++.. ....++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            346667899999999999998643    2358999987543 3345789999999999999999999999765 457889


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus       105 v~e~~~~~~L~~~l~~~  121 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNE  121 (298)
T ss_dssp             EEECCTTCBHHHHHHCT
T ss_pred             EEeCCCCCCHHHHHHhc
Confidence            99999999999999753

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.88  E-value=1.9e-09  Score=107.61  Aligned_cols=89  Identities=30%  Similarity=0.452  Sum_probs=73.9

Q ss_pred             ccccceecccCceeEEEEEecC----CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE-EEEE
Q 008046          475 FASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES-MLIY  548 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~-~lV~  548 (579)
                      |...++||+|+||.||++...+    +..+|+|.+..... ...+.|.+|+.++.+++||||+++++++...+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            4455789999999999998643    23699999975432 4457899999999999999999999999776654 8999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+.+|+|.+++...
T Consensus       103 e~~~~~~L~~~~~~~  117 (298)
T 3pls_A          103 PYMCHGDLLQFIRSP  117 (298)
T ss_dssp             CCCTTCBHHHHHHCT
T ss_pred             ecccCCCHHHHHhcc
Confidence            999999999999763

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.88  E-value=1.8e-09  Score=111.97  Aligned_cols=90  Identities=22%  Similarity=0.300  Sum_probs=68.9

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC---cccHHHHHHHHHH-HhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS---GQGMEEFKNEVTL-IARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~-l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++.... ++.+|+|+++...   ....+.+..|..+ +..++||||+++++++...+..++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            568888999999999999999764 7889999997542   2234567777776 5678999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++|+|.+++..
T Consensus       118 ~E~~~gg~L~~~l~~  132 (373)
T 2r5t_A          118 LDYINGGELFYHLQR  132 (373)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHHh
Confidence            999999999998864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.88  E-value=2.9e-09  Score=107.74  Aligned_cols=89  Identities=20%  Similarity=0.296  Sum_probs=72.7

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCC--------cccHHHHHHHHHHHhcCCCCceeceeEEEEECCe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--------GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~  543 (579)
                      ++|...+.||+|+||.||++.... ++.||||.+....        ......+.+|+.++.+++||||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            567888899999999999999754 7899999986431        112345889999999999999999999986554 


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+++|+|.+++..
T Consensus        89 ~~lv~e~~~~~~L~~~~~~  107 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVG  107 (322)
T ss_dssp             EEEEEECCTTEETHHHHST
T ss_pred             eEEEEecCCCCcHHHHHhc
Confidence            8999999999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.88  E-value=4.2e-09  Score=107.82  Aligned_cols=88  Identities=22%  Similarity=0.285  Sum_probs=75.2

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .++|...+.||+|+||.||++.... ++.+|+|.++....    .+.+|++++.++ +||||+++++++......++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            3568888899999999999999754 88999999975432    245688888887 79999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++|+|.+++...
T Consensus        97 ~~~gg~L~~~i~~~  110 (342)
T 2qr7_A           97 LMKGGELLDKILRQ  110 (342)
T ss_dssp             CCCSCBHHHHHHTC
T ss_pred             CCCCCcHHHHHHHc
Confidence            99999999998653

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.87  E-value=4.6e-09  Score=104.86  Aligned_cols=90  Identities=29%  Similarity=0.510  Sum_probs=75.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...+.||+|+||.||++... +++.||+|.++...  ....+.+.+|+.++.+++||||+++++++...+..++|+|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            46777889999999999999975 58899999986442  2234688999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |++ |+|.+++...
T Consensus        83 ~~~-~~L~~~~~~~   95 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS   95 (299)
T ss_dssp             CCS-EEHHHHHHHT
T ss_pred             ccc-CCHHHHHHhh
Confidence            997 6999998654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.86  E-value=3.3e-09  Score=104.91  Aligned_cols=86  Identities=28%  Similarity=0.514  Sum_probs=74.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE-----------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ-----------  540 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~-----------  540 (579)
                      ++|...+.||+|+||.||++... +++.||+|.++...    +.+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            46788889999999999999976 58999999997543    357789999999999999999998754           


Q ss_pred             -----CCeEEEEEeccCCCCHHHHhcC
Q 008046          541 -----ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       541 -----~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                           ....++|+||+++|+|.+++..
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEK  113 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHH
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhh
Confidence                 3457999999999999999964

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.86  E-value=2.8e-09  Score=105.32  Aligned_cols=87  Identities=29%  Similarity=0.538  Sum_probs=74.0

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-CeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-DESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++.. .++.||||.++..  ...+.|.+|+.++.+++|+|++++++++... +..++|+||+
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            5677778999999999999987 4789999999753  3457899999999999999999999997654 4689999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus        98 ~~~~L~~~l~~  108 (278)
T 1byg_A           98 AKGSLVDYLRS  108 (278)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCCHHHHHHh
Confidence            99999999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.86  E-value=2.8e-09  Score=108.29  Aligned_cols=88  Identities=18%  Similarity=0.189  Sum_probs=75.9

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++.. .+++.||||.+....  ..+.+.+|+.++.++ +|+||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            5677888999999999999996 458899999987542  234688999999999 999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      + +++|.+++...
T Consensus        87 ~-~~~L~~~~~~~   98 (330)
T 2izr_A           87 L-GPSLEDLFDLC   98 (330)
T ss_dssp             C-CCBHHHHHHHT
T ss_pred             C-CCCHHHHHHHc
Confidence            9 99999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.86  E-value=3.5e-09  Score=107.59  Aligned_cols=94  Identities=21%  Similarity=0.253  Sum_probs=78.5

Q ss_pred             Hhccccccc-ceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeE
Q 008046          470 KATDNFASY-NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES  544 (579)
Q Consensus       470 ~at~~f~~~-~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~  544 (579)
                      .-.+.|... ++||+|+||.||++.... ++.||+|.++..  ......++.+|+.++.++ +||||+++++++......
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~  104 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI  104 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence            333445544 789999999999999764 889999999753  234467899999999999 569999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++|+|.+++...
T Consensus       105 ~lv~e~~~~~~L~~~~~~~  123 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLPE  123 (327)
T ss_dssp             EEEEECCTTEEGGGGGSSC
T ss_pred             EEEEEecCCCcHHHHHHHh
Confidence            9999999999999998643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.86  E-value=2.1e-09  Score=110.65  Aligned_cols=90  Identities=24%  Similarity=0.329  Sum_probs=77.4

Q ss_pred             ccccccceecccCceeEEEEEe----cCCcEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL----VEGQEIAVKRLSKGS----GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~  543 (579)
                      ++|...+.||+|+||.||++..    ..++.||||+++...    ....+.+.+|+.++.++ +|+||+++++++.....
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5678888999999999999987    358899999986431    22345688899999999 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .+|||||+++|+|.++|..
T Consensus       134 ~~lv~e~~~~~~L~~~l~~  152 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQ  152 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHH
T ss_pred             EEEEeecCCCCCHHHHHHH
Confidence            9999999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.85  E-value=7.4e-09  Score=105.48  Aligned_cols=88  Identities=23%  Similarity=0.425  Sum_probs=76.3

Q ss_pred             hcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCceeceeEEEEECC----eE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIAR--LQHRNLVKLLGCCIQAD----ES  544 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~nlv~l~g~~~~~~----~~  544 (579)
                      ..++|...+.||+|+||.||++.. +++.||||.+..   ...+.+.+|++++..  ++||||+++++++....    ..
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            346788889999999999999987 588999999863   345678899998887  78999999999998765    78


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+++|+|.+++..
T Consensus       116 ~lv~e~~~~g~L~~~l~~  133 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNR  133 (342)
T ss_dssp             EEEECCCTTCBHHHHHHH
T ss_pred             EEEEeecCCCcHHHHHhc
Confidence            999999999999999964

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.85  E-value=2.8e-09  Score=106.14  Aligned_cols=89  Identities=27%  Similarity=0.491  Sum_probs=74.4

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .+.|...++||+|+||.||++...  ..+|+|.++...  ....+.|.+|+.++.+++|+||+++++++ .....++|+|
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            356788889999999999999864  369999997442  33456899999999999999999999975 4556889999


Q ss_pred             ccCCCCHHHHhcCC
Q 008046          550 YMPNKSLDFFIFDI  563 (579)
Q Consensus       550 y~~~GsL~~~l~~~  563 (579)
                      |+++++|.+++...
T Consensus       100 ~~~~~~L~~~l~~~  113 (289)
T 3og7_A          100 WCEGSSLYHHLHAS  113 (289)
T ss_dssp             CCCEEEHHHHHTTC
T ss_pred             ecCCCcHHHHHhhc
Confidence            99999999999643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.85  E-value=5.2e-09  Score=107.04  Aligned_cols=90  Identities=19%  Similarity=0.354  Sum_probs=77.9

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCC--CceeceeEEEEECCeEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQH--RNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H--~nlv~l~g~~~~~~~~~lV  547 (579)
                      .+.|...+.||+|+||.||++...+++.||||++...  ..+..+.|.+|+.++.+++|  +||+++++++......++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            3567788899999999999999888999999998744  23345789999999999976  9999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      ||| .+|+|.+++..
T Consensus        88 ~e~-~~~~L~~~l~~  101 (343)
T 3dbq_A           88 MEC-GNIDLNSWLKK  101 (343)
T ss_dssp             ECC-CSEEHHHHHHH
T ss_pred             EeC-CCCCHHHHHHh
Confidence            995 58899999965

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.84  E-value=2.3e-09  Score=111.43  Aligned_cols=89  Identities=22%  Similarity=0.392  Sum_probs=69.7

Q ss_pred             HHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------  541 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------  541 (579)
                      +...++|...+.||+|+||.||++... +++.||||++.....    ...+|+.+|+.++|+|||++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            445678888899999999999999864 589999999875422    234799999999999999999998543      


Q ss_pred             --------------------------------CeEEEEEeccCCCCHHHHhcC
Q 008046          542 --------------------------------DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 --------------------------------~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                                                      ...++||||++ |+|.+.+..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  130 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKS  130 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHH
Confidence                                            34889999998 688887753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.84  E-value=2.2e-09  Score=106.60  Aligned_cols=90  Identities=26%  Similarity=0.326  Sum_probs=71.0

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHH-HHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGME-EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~-~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .++|...+.||+|+||.||++... +++.||+|+++... ..... .+..+...+..++||||+++++++...+..++|+
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            457788889999999999999974 58899999997542 22223 3444555578889999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||++ |+|.+++..
T Consensus        86 e~~~-~~l~~~l~~   98 (290)
T 3fme_A           86 ELMD-TSLDKFYKQ   98 (290)
T ss_dssp             ECCS-EEHHHHHHH
T ss_pred             ehhc-cchHHHHHH
Confidence            9997 688888754

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=98.84  E-value=2e-08  Score=83.69  Aligned_cols=76  Identities=25%  Similarity=0.371  Sum_probs=58.8

Q ss_pred             ceEEEecCC-eEEEcCCCcEEEeecCCCC-CCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCC
Q 008046           82 GLLNVTSKG-IVLLDGRDRIFWSSNTSIT-MKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGM  159 (579)
Q Consensus        82 ~~l~~~~~G-L~l~~~~~~~~Wst~~~~~-~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~  159 (579)
                      -+|.+..|| |||.+. +.+||++++... .....+.|.++|||||+|. .++++|+|-.                    
T Consensus        21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~-~~~~vWss~t--------------------   78 (105)
T 4h3o_A           21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDS-SGRSLWASHS--------------------   78 (105)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECT-TCCEEEECCC--------------------
T ss_pred             EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECC-CcEEEEEecC--------------------
Confidence            468899999 999985 578999998533 3456799999999999997 5678998621                    


Q ss_pred             ceEEEeccCCCCCCCcceEEeecCCCCcEEE
Q 008046          160 DRHLSSWKSINDPAPGEFSLWIDTHGFPQLV  190 (579)
Q Consensus       160 ~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~  190 (579)
                                 ....+.|.+.|+++|+..++
T Consensus        79 -----------~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 -----------TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             -----------CCCSSCEEEEECTTSCEEEE
T ss_pred             -----------CCCCCCEEEEEeCCCeEEEE
Confidence                       11346688999999987664

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.83  E-value=1.8e-09  Score=109.53  Aligned_cols=90  Identities=28%  Similarity=0.489  Sum_probs=73.3

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc----EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...+.||+|+||.||++.... +.    .||+|.+.... ....+.+.+|+.++.+++||||+++++++. .+..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            456777899999999999998643 43    38888886432 333457889999999999999999999885 566889


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus        92 v~e~~~~~~L~~~l~~~  108 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH  108 (325)
T ss_dssp             EEECCTTCBSHHHHHSS
T ss_pred             EEEeCCCCCHHHHHHHc
Confidence            99999999999999753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.83  E-value=2.3e-09  Score=109.34  Aligned_cols=92  Identities=23%  Similarity=0.354  Sum_probs=78.0

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc--------ccHHHHHHHHHHHhcCCCCceeceeEEEEECC
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG--------QGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~  542 (579)
                      .++|...+.||+|+||.||++... +++.||||.++....        ...+.+.+|+.++.+++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            356888899999999999999864 488999999975421        12346788999999999999999999999999


Q ss_pred             eEEEEEeccCCC-CHHHHhcCC
Q 008046          543 ESMLIYEYMPNK-SLDFFIFDI  563 (579)
Q Consensus       543 ~~~lV~Ey~~~G-sL~~~l~~~  563 (579)
                      ..++|+||+..| +|.+++...
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~  124 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH  124 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC
T ss_pred             EEEEEEEeCCCCccHHHHHHhc
Confidence            999999999877 999998653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.83  E-value=9.2e-09  Score=104.47  Aligned_cols=88  Identities=22%  Similarity=0.405  Sum_probs=73.7

Q ss_pred             hcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC--CCCceeceeEEEEEC----CeE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL--QHRNLVKLLGCCIQA----DES  544 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l--~H~nlv~l~g~~~~~----~~~  544 (579)
                      ..++|...++||+|+||.||++... ++.||||++...   ....+..|.+++...  +|+||+++++++...    ...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            3467888899999999999999875 889999998632   335566677766655  899999999999887    789


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++||||+++|+|.+++..
T Consensus       111 ~lv~e~~~~g~L~~~l~~  128 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKS  128 (337)
T ss_dssp             EEEECCCTTCBHHHHHHH
T ss_pred             EEEEeccCCCcHHHHhhc
Confidence            999999999999999964

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.83  E-value=3.8e-09  Score=108.16  Aligned_cols=92  Identities=26%  Similarity=0.444  Sum_probs=71.9

Q ss_pred             hcccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcc-----cHHHHHHHHHHHhcCCCCceeceeEEEEECCeE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQ-----GMEEFKNEVTLIARLQHRNLVKLLGCCIQADES  544 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~  544 (579)
                      ..++|...+.||+|+||.||++.... ++.||||.+......     ..+.+.+|+.++.+++||||+++++++......
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            34568888899999999999999754 889999999743211     124788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++|+||+++ +|.+++...
T Consensus        88 ~lv~e~~~~-~l~~~~~~~  105 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDN  105 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTC
T ss_pred             EEEEEcCCC-CHHHHHHhc
Confidence            999999975 899888653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.83  E-value=1e-08  Score=103.92  Aligned_cols=86  Identities=20%  Similarity=0.390  Sum_probs=75.4

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEE--CCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQ--ADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~--~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++.. .+++.||+|.++..   ..+.+.+|+.++.+++ |+||+++++++..  ....++|+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688888999999999999986 45889999999743   3578999999999997 9999999999987  56789999


Q ss_pred             eccCCCCHHHHhc
Q 008046          549 EYMPNKSLDFFIF  561 (579)
Q Consensus       549 Ey~~~GsL~~~l~  561 (579)
                      ||+++++|.+++.
T Consensus       113 e~~~~~~l~~~~~  125 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ  125 (330)
T ss_dssp             ECCCCCCHHHHGG
T ss_pred             eccCchhHHHHHH
Confidence            9999999998875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.82  E-value=6.9e-09  Score=102.69  Aligned_cols=90  Identities=29%  Similarity=0.496  Sum_probs=75.2

Q ss_pred             cccccccceecccCceeEEEEEecC----CcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...+.||+|+||.||++....    +..||+|.++.. .....+.|.+|+.++.+++||||+++++++.. +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4567788899999999999998643    336999999754 23446789999999999999999999998754 55689


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      |+||+++++|.+++..
T Consensus        90 v~e~~~~~~L~~~l~~  105 (281)
T 3cc6_A           90 IMELYPYGELGHYLER  105 (281)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEecCCCCCHHHHHHh
Confidence            9999999999999964

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.81  E-value=2.3e-09  Score=120.11  Aligned_cols=90  Identities=18%  Similarity=0.313  Sum_probs=73.5

Q ss_pred             ccccccceecccCceeEEEEEec--CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe-----E
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV--EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE-----S  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~--~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~-----~  544 (579)
                      ++|...+.||+|+||.||++...  +++.||||.+... .....+.|.+|+.++.+++|||||++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            56777789999999999999975  5889999998643 23345678999999999999999999999987654     6


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      +|||||+++++|.+++..
T Consensus       160 ~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             EEEEECCCCEECC----C
T ss_pred             EEEEEeCCCCcHHHHHhC
Confidence            999999999999887643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.81  E-value=7.9e-09  Score=107.74  Aligned_cols=90  Identities=19%  Similarity=0.343  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCC--CCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQ--HRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...+.||+|+||.||++....++.||||.+...  .....+.+.+|+.++.+++  |+||+++++++...+..+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458888899999999999999878999999999644  2344578999999999996  599999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      | +.+++|.+++...
T Consensus       136 E-~~~~~L~~~l~~~  149 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK  149 (390)
T ss_dssp             E-CCSEEHHHHHHHC
T ss_pred             e-cCCCCHHHHHHhc
Confidence            9 5689999999653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.80  E-value=2.2e-09  Score=108.86  Aligned_cols=90  Identities=28%  Similarity=0.466  Sum_probs=73.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ-GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++... +++.||+|++...... ....+.+|+.++.+++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            45777789999999999999975 5889999999744221 122566899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      ++ |+|.+++...
T Consensus        82 ~~-~~l~~~~~~~   93 (324)
T 3mtl_A           82 LD-KDLKQYLDDC   93 (324)
T ss_dssp             CS-EEHHHHHHHT
T ss_pred             cc-cCHHHHHHhc
Confidence            97 6999988653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.79  E-value=6.4e-09  Score=115.78  Aligned_cols=91  Identities=23%  Similarity=0.360  Sum_probs=76.1

Q ss_pred             hcccccccceecccCceeEEEEEecC----CcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ..++|...+.||+|+||.||+|....    +..||+|.++... ....+.|.+|+.++.+++||||+++++++. .+..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            34567778899999999999998743    4579999987543 333568999999999999999999999984 56689


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +||||+++|+|.+++..
T Consensus       467 lv~E~~~~g~L~~~l~~  483 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQV  483 (656)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHh
Confidence            99999999999999964

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.78  E-value=9.1e-09  Score=108.81  Aligned_cols=90  Identities=21%  Similarity=0.371  Sum_probs=76.4

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----Ce
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DE  543 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~  543 (579)
                      .++|...+.||+|+||.||++.... ++.||||++...  .....+.+.+|+.++.+++|+||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            3678888999999999999999754 788999999754  223456899999999999999999999998765     56


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+. |+|.+++..
T Consensus       105 ~~lv~e~~~-~~L~~~~~~  122 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT  122 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS
T ss_pred             EEEEEecCC-cCHHHHHhc
Confidence            899999996 699999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.78  E-value=8.8e-09  Score=103.11  Aligned_cols=89  Identities=25%  Similarity=0.363  Sum_probs=72.4

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCceeceeEEEE--ECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS----GQGMEEFKNEVTLIARLQHRNLVKLLGCCI--QADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~--~~~~~~  545 (579)
                      ++|...+.||+|+||.||++... +++.+|+|.++...    ....+.+.+|+.++.+++|+||+++++++.  .....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            56788899999999999999975 47899999986431    234578999999999999999999999984  445789


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||++++ |.+++..
T Consensus        85 lv~e~~~~~-l~~~~~~  100 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDS  100 (305)
T ss_dssp             EEEECCSEE-HHHHHHH
T ss_pred             EEehhccCC-HHHHHHh
Confidence            999999876 7777754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.78  E-value=8e-09  Score=104.94  Aligned_cols=90  Identities=30%  Similarity=0.562  Sum_probs=75.0

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      ++|...+.||+|+||.||++.... ++    .||+|.+... .....+.+.+|+.++.+++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            467778899999999999999643 43    4688887644 3445678999999999999999999999998654 788


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      |+||+++|+|.+++...
T Consensus        94 v~~~~~~g~L~~~l~~~  110 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREH  110 (327)
T ss_dssp             EECCCSSCBHHHHHHHT
T ss_pred             EEEecCCCcHHHHHHhc
Confidence            99999999999999753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.78  E-value=6.4e-09  Score=110.82  Aligned_cols=89  Identities=21%  Similarity=0.379  Sum_probs=66.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----CeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~~  544 (579)
                      ++|...+.||+|+||.||++... .++.||||++...  .....+.+.+|+.++.+++|+|||++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            56888899999999999999865 4889999999653  223456899999999999999999999998543     468


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||+ +|+|.+++..
T Consensus       133 ~lv~e~~-~~~L~~~~~~  149 (458)
T 3rp9_A          133 YVVLEIA-DSDFKKLFRT  149 (458)
T ss_dssp             EEEECCC-SEEHHHHHHS
T ss_pred             EEEEecc-ccchhhhccc
Confidence            9999998 5799998864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.77  E-value=1e-08  Score=107.26  Aligned_cols=85  Identities=20%  Similarity=0.170  Sum_probs=69.4

Q ss_pred             ccccc-ceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHh-cCCCCceeceeEEEEE----CCeEEE
Q 008046          474 NFASY-NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIA-RLQHRNLVKLLGCCIQ----ADESML  546 (579)
Q Consensus       474 ~f~~~-~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~-~l~H~nlv~l~g~~~~----~~~~~l  546 (579)
                      +|... +.||+|+||.||++.... ++.||||+++..     ..+.+|+.++. ..+|+||+++++++..    ....+|
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            34433 589999999999999754 889999999632     46778888874 4589999999998865    456899


Q ss_pred             EEeccCCCCHHHHhcCC
Q 008046          547 IYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~  563 (579)
                      ||||+++|+|.++|...
T Consensus       137 v~E~~~gg~L~~~l~~~  153 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDR  153 (400)
T ss_dssp             EEECCCSEEHHHHHHCC
T ss_pred             EEEeCCCCcHHHHHHHh
Confidence            99999999999999753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.76  E-value=1.3e-08  Score=104.23  Aligned_cols=90  Identities=22%  Similarity=0.453  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEE--------C
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--------A  541 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--------~  541 (579)
                      ++|...++||+|+||.||++... +++.||+|++....  ......+.+|+.++.+++|+||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            56788889999999999999974 58899999986442  2335678999999999999999999999887        3


Q ss_pred             CeEEEEEeccCCCCHHHHhcCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +..++|+||++ |+|.+.+...
T Consensus        97 ~~~~lv~e~~~-~~l~~~l~~~  117 (351)
T 3mi9_A           97 GSIYLVFDFCE-HDLAGLLSNV  117 (351)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCT
T ss_pred             ceEEEEEeccC-CCHHHHHhhc
Confidence            46899999997 5787777653

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.76  E-value=9.1e-09  Score=104.35  Aligned_cols=90  Identities=28%  Similarity=0.371  Sum_probs=75.5

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEE--------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQ--------A  541 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~--------~  541 (579)
                      ..+|...++||+|+||.||++... +++.||+|++........+.+.+|+.++.++. ||||+++++++..        .
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            356777889999999999999964 58899999987655556678999999999996 9999999999853        2


Q ss_pred             CeEEEEEeccCCCCHHHHhcC
Q 008046          542 DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ...++|+||+. |+|.+++..
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~  126 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKK  126 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHH
T ss_pred             ceEEEEEEecC-CCHHHHHHH
Confidence            34789999995 899998864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.75  E-value=1.8e-08  Score=101.23  Aligned_cols=93  Identities=27%  Similarity=0.474  Sum_probs=72.5

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-----cccHHHHHHHHHHHhcC---CCCceeceeEEEEEC
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-----GQGMEEFKNEVTLIARL---QHRNLVKLLGCCIQA  541 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~~~  541 (579)
                      .+++|...++||+|+||.||++... .++.||+|.+....     ......+.+|+.++.++   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            3567888899999999999999964 58899999986321     12235677888877766   499999999999876


Q ss_pred             C-----eEEEEEeccCCCCHHHHhcCCC
Q 008046          542 D-----ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       542 ~-----~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      .     ..++|+||+. |+|.+++....
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~  113 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP  113 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc
Confidence            5     5799999997 69999997643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.75  E-value=9.1e-09  Score=104.79  Aligned_cols=88  Identities=18%  Similarity=0.289  Sum_probs=70.9

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCC--------cccHHHHHHHHHHHhcCC---------CCceecee
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--------GQGMEEFKNEVTLIARLQ---------HRNLVKLL  535 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~nlv~l~  535 (579)
                      ++|...+.||+|+||.||++.. +++.||||+++...        ....+.+.+|+.++++++         |+|+|++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4577778999999999999987 67999999997542        223478999999998885         88888888


Q ss_pred             EEEE------------------------------ECCeEEEEEeccCCCCHHHHhc
Q 008046          536 GCCI------------------------------QADESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       536 g~~~------------------------------~~~~~~lV~Ey~~~GsL~~~l~  561 (579)
                      +.+.                              .....+|||||+++|+|.+.+.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~  154 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR  154 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH
Confidence            8653                              1578999999999997666663

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.75  E-value=9.8e-09  Score=101.94  Aligned_cols=89  Identities=31%  Similarity=0.507  Sum_probs=67.5

Q ss_pred             ccccccceecccCceeEEEEEecC--Cc--EEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE--GQ--EIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~--g~--~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...+.||+|+||.||++....  +.  .||+|.++..   .....+.|.+|+.++.+++||||+++++++.... .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            467777899999999999998632  33  6899998743   2234578999999999999999999999987654 78


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        97 ~v~e~~~~~~L~~~l~~  113 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRK  113 (291)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             eeEecccCCCHHHHHHh
Confidence            99999999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.75  E-value=8e-09  Score=106.78  Aligned_cols=90  Identities=20%  Similarity=0.376  Sum_probs=69.3

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------  542 (579)
                      .+.|...+.||+|+||.||++... .|+.||||++...  .....+.+.+|+.++..++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            356888889999999999999974 4899999999643  2233567899999999999999999999987653      


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..++|+||+ +++|.+++..
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~  122 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH  122 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH
T ss_pred             eEEEEEecC-CCCHHHHHhc
Confidence            459999999 8899999864

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.74  E-value=4.6e-09  Score=108.91  Aligned_cols=90  Identities=16%  Similarity=0.190  Sum_probs=71.1

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHH---HHHhcCCCCceecee-------EE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEV---TLIARLQHRNLVKLL-------GC  537 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~---~~l~~l~H~nlv~l~-------g~  537 (579)
                      .++|...+.||+|+||.||++... +++.||||++...   .....+.|.+|+   .++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            456777889999999999999964 5899999999733   234457899999   556666899999998       55


Q ss_pred             EEECC-----------------eEEEEEeccCCCCHHHHhcC
Q 008046          538 CIQAD-----------------ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       538 ~~~~~-----------------~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +...+                 ..+|||||+ +|+|.+++..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~  192 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV  192 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHH
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence            55442                 278999999 6899999964

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.74  E-value=1.6e-08  Score=105.13  Aligned_cols=90  Identities=26%  Similarity=0.478  Sum_probs=68.0

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCC-CCceeceeEEEEECC--eEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQAD--ESM  545 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~--~~~  545 (579)
                      .++|...+.||+|+||.||++... .++.||||++...  .....+.+.+|+.++.++. |+||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            467888889999999999999864 4889999998643  2334567889999999997 999999999987644  689


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|||||+ |+|.+++..
T Consensus        88 lv~e~~~-~~L~~~~~~  103 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRA  103 (388)
T ss_dssp             EEEECCS-EEHHHHHHH
T ss_pred             EEecccC-cCHHHHHHc
Confidence            9999997 689988864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.74  E-value=2.7e-08  Score=99.48  Aligned_cols=86  Identities=21%  Similarity=0.200  Sum_probs=71.1

Q ss_pred             cccccc-ceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHH-hcCCCCceeceeEEEEE----CCeEE
Q 008046          473 DNFASY-NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLI-ARLQHRNLVKLLGCCIQ----ADESM  545 (579)
Q Consensus       473 ~~f~~~-~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l-~~l~H~nlv~l~g~~~~----~~~~~  545 (579)
                      ++|... +.||+|+||.||++... +++.||+|.++.     ...+.+|+.++ ...+||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            345444 67999999999999974 488999999864     24677888887 55699999999999876    56789


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +||||+++|+|.+++...
T Consensus        92 lv~e~~~~~~L~~~l~~~  109 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR  109 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC
T ss_pred             EEEeecCCCcHHHHHHhc
Confidence            999999999999999753

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.74  E-value=1.5e-08  Score=103.78  Aligned_cols=90  Identities=22%  Similarity=0.346  Sum_probs=75.7

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----CeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~~  544 (579)
                      .++|...+.||+|+||.||++... +++.||||.+.... ......+.+|+.++.+++|+||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            457888889999999999999975 48899999997543 23456789999999999999999999988754     578


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||++ |+|.+++..
T Consensus        90 ~lv~e~~~-~~L~~~~~~  106 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST  106 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH
T ss_pred             EEEEeccC-ccHHHHHhh
Confidence            99999997 699998864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.74  E-value=2.5e-08  Score=101.01  Aligned_cols=88  Identities=20%  Similarity=0.381  Sum_probs=72.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHH-HHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVT-LIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~-~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...+.||+|+||.||++... +++.||||.++... .....++..|+. +++.++||||+++++++...+..++|+|
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            56777789999999999999975 58899999997543 233456677776 6777899999999999999999999999


Q ss_pred             ccCCCCHHHHhc
Q 008046          550 YMPNKSLDFFIF  561 (579)
Q Consensus       550 y~~~GsL~~~l~  561 (579)
                      |++ |+|.+++.
T Consensus       102 ~~~-~~l~~~~~  112 (327)
T 3aln_A          102 LMS-TSFDKFYK  112 (327)
T ss_dssp             CCS-EEHHHHHH
T ss_pred             ecC-CChHHHHH
Confidence            997 58887775

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.73  E-value=1.4e-08  Score=101.10  Aligned_cols=88  Identities=18%  Similarity=0.306  Sum_probs=76.5

Q ss_pred             ccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...+.||+|+||.||++.. .+++.||||.+....  ..+.+.+|+.++.++ +|+|++++++++......++|+||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            4677888999999999999996 458899999986432  234688999999999 799999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      + +++|.+++...
T Consensus        88 ~-~~~L~~~l~~~   99 (298)
T 1csn_A           88 L-GPSLEDLLDLC   99 (298)
T ss_dssp             C-CCBHHHHHHHT
T ss_pred             c-CCCHHHHHHHh
Confidence            9 99999999753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.73  E-value=1.6e-09  Score=109.22  Aligned_cols=92  Identities=23%  Similarity=0.428  Sum_probs=78.0

Q ss_pred             HhcccccccceecccCceeEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ...++|...+.||+|+||.||++....  .+|+|.++...  ....+.|.+|+.++.+++|+||+++++++...+..++|
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            345678888999999999999998753  59999987432  23345788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++++|.+++...
T Consensus       108 ~e~~~~~~L~~~l~~~  123 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDA  123 (319)
T ss_dssp             CBCCCSEEHHHHTTSS
T ss_pred             eecccCCcHHHHHHhc
Confidence            9999999999999653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.73  E-value=2.1e-08  Score=103.70  Aligned_cols=88  Identities=20%  Similarity=0.338  Sum_probs=73.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------e
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------E  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------~  543 (579)
                      ++|...+.||+|+||.||++... .++.||||++...  .....+.+.+|+.++..++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            56788889999999999999865 4889999999753  2234567899999999999999999999987654      7


Q ss_pred             EEEEEeccCCCCHHHHhc
Q 008046          544 SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~  561 (579)
                      .++||||++ |+|.+++.
T Consensus       105 ~~lv~e~~~-~~l~~~~~  121 (371)
T 2xrw_A          105 VYIVMELMD-ANLCQVIQ  121 (371)
T ss_dssp             EEEEEECCS-EEHHHHHH
T ss_pred             eEEEEEcCC-CCHHHHHh
Confidence            899999997 57888775

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.72  E-value=1.4e-08  Score=113.52  Aligned_cols=91  Identities=25%  Similarity=0.309  Sum_probs=78.3

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~l  546 (579)
                      .++|...+.||+|+||.||++.... ++.||||+++..   .....+.+..|..++..+ +|++|+++++++...+..+|
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            4578888999999999999999754 788999999743   223456788999999987 79999999999988899999


Q ss_pred             EEeccCCCCHHHHhcC
Q 008046          547 IYEYMPNKSLDFFIFD  562 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~  562 (579)
                      ||||+++|+|.++|..
T Consensus       420 V~E~~~gg~L~~~l~~  435 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQ  435 (674)
T ss_dssp             EEECCCSCBHHHHHHH
T ss_pred             EEeCcCCCcHHHHHHh
Confidence            9999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.71  E-value=1e-08  Score=105.74  Aligned_cols=91  Identities=18%  Similarity=0.222  Sum_probs=70.5

Q ss_pred             hcccccccceecccCceeEEEEEecC------CcEEEEEEecCCCccc-----------HHHHHHHHHHHhcCCCCceec
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGSGQG-----------MEEFKNEVTLIARLQHRNLVK  533 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~nlv~  533 (579)
                      ..++|...+.||+|+||.||++....      ++.||||.+.......           ...+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34578888999999999999998754      4679999987543211           123445666777889999999


Q ss_pred             eeEEEEEC----CeEEEEEeccCCCCHHHHhcC
Q 008046          534 LLGCCIQA----DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       534 l~g~~~~~----~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +++++...    ...+|||||+ +|+|.+++..
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~  144 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA  144 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh
Confidence            99998764    4589999999 9999999965

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.71  E-value=9.2e-09  Score=103.57  Aligned_cols=94  Identities=18%  Similarity=0.338  Sum_probs=80.1

Q ss_pred             HHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCC--CCceeceeEEEEECCe
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQ--HRNLVKLLGCCIQADE  543 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~nlv~l~g~~~~~~~  543 (579)
                      +....+.|...+.||+|+||.||++...+++.||||.+...  .....+.+.+|+.++.+++  |+|++++++++...+.
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~  102 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY  102 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence            33445678888999999999999999888999999999643  2334578999999999996  5999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+| +.+++|.+++..
T Consensus       103 ~~lv~e-~~~~~L~~~l~~  120 (313)
T 3cek_A          103 IYMVME-CGNIDLNSWLKK  120 (313)
T ss_dssp             EEEEEC-CCSEEHHHHHHH
T ss_pred             EEEEEe-cCCCcHHHHHHh
Confidence            999999 568899999965

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.70  E-value=2.4e-08  Score=105.68  Aligned_cols=86  Identities=20%  Similarity=0.186  Sum_probs=71.9

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEeccCC
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      +...+.||+|+||+||.....+|+.||||++..   ...+.+.+|+.++.++ +|||||++++++......+||+||+. 
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~---~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG---GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH---HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            344578999999999766666799999999864   2345788999999886 89999999999999999999999995 


Q ss_pred             CCHHHHhcCCC
Q 008046          554 KSLDFFIFDID  564 (579)
Q Consensus       554 GsL~~~l~~~~  564 (579)
                      |+|.+++....
T Consensus        93 gsL~~~l~~~~  103 (434)
T 2rio_A           93 LNLQDLVESKN  103 (434)
T ss_dssp             EEHHHHHHTC-
T ss_pred             CCHHHHHhccC
Confidence            79999997643

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.70  E-value=3.1e-09  Score=117.24  Aligned_cols=92  Identities=24%  Similarity=0.394  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEE------CCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ------ADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~------~~~~  544 (579)
                      ++|...+.||+|+||.||++... +++.||||.+... .....+.|.+|+.++.+++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            56888899999999999999874 4889999998754 33445689999999999999999999998754      5677


Q ss_pred             EEEEeccCCCCHHHHhcCCC
Q 008046          545 MLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ++||||+++|+|.+++....
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~  113 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFE  113 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSS
T ss_pred             EEEEEeCCCCCHHHHHHhcc
Confidence            99999999999999997643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.70  E-value=9.6e-09  Score=105.11  Aligned_cols=89  Identities=16%  Similarity=0.223  Sum_probs=68.1

Q ss_pred             ccccccceecccCceeEEEEEec----CCcEEEEEEecCCCcc-----------cHHHHHHHHHHHhcCCCCceeceeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGSGQ-----------GMEEFKNEVTLIARLQHRNLVKLLGC  537 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~nlv~l~g~  537 (579)
                      ++|...+.||+|+||.||++...    .+..+|+|.+......           ..+.+.+|+..+..++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56888889999999999999975    4678999998754321           12346788889999999999999999


Q ss_pred             EEE----CCeEEEEEeccCCCCHHHHhcC
Q 008046          538 CIQ----ADESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       538 ~~~----~~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +..    ....++||||+ +++|.+++..
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~  144 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ  144 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBG
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHh
Confidence            988    67899999999 9999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.69  E-value=5.3e-08  Score=98.87  Aligned_cols=87  Identities=31%  Similarity=0.511  Sum_probs=68.9

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHh--cCCCCceeceeEEEEE-----CCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIA--RLQHRNLVKLLGCCIQ-----ADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~--~l~H~nlv~l~g~~~~-----~~~~~  545 (579)
                      ++|...+.||+|+||.||++.. +++.||||++...   ....+..|.+++.  .++|+||+++++.+..     ....+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            5677888999999999999976 6789999998643   3445666655544  5899999999986653     22568


Q ss_pred             EEEeccCCCCHHHHhcCC
Q 008046          546 LIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~  563 (579)
                      +||||+++|+|.+++...
T Consensus        89 lv~e~~~~g~L~~~l~~~  106 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLH  106 (336)
T ss_dssp             EEECCCTTCBHHHHHHHC
T ss_pred             EEEecCCCCcHHHHHhhc
Confidence            999999999999999643

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.69  E-value=1e-08  Score=103.61  Aligned_cols=93  Identities=24%  Similarity=0.483  Sum_probs=73.4

Q ss_pred             HhcccccccceecccCceeEEEEEec--CCcEEEEEEecCCC--cccHHHHHHHHHHHhcC---CCCceeceeEEEE---
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLV--EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARL---QHRNLVKLLGCCI---  539 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~--~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~---  539 (579)
                      .+.++|...+.||+|+||.||++...  +++.||+|.++...  ......+.+|+.++..+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            34567888899999999999999973  57899999986432  22234677788777665   8999999999987   


Q ss_pred             --ECCeEEEEEeccCCCCHHHHhcCC
Q 008046          540 --QADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       540 --~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                        .....++|+||++ |+|.+++...
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~  112 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKV  112 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhc
Confidence              3456899999997 7999998653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.69  E-value=1.8e-08  Score=107.49  Aligned_cols=89  Identities=21%  Similarity=0.343  Sum_probs=72.8

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~  542 (579)
                      .++|...++||+|+||.||++... .++.||||++...  .....+.+.+|+.++..++|||||++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            356888889999999999999865 4889999999753  233456889999999999999999999998654      3


Q ss_pred             eEEEEEeccCCCCHHHHhc
Q 008046          543 ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~  561 (579)
                      ..+|||||+++ +|.+.+.
T Consensus       141 ~~~lv~E~~~~-~l~~~~~  158 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ  158 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT
T ss_pred             eEEEEEeCCCC-CHHHHHh
Confidence            57999999975 4666653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.68  E-value=2.9e-08  Score=102.34  Aligned_cols=90  Identities=16%  Similarity=0.283  Sum_probs=75.4

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----CeE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DES  544 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~~  544 (579)
                      .++|...+.||+|+||.||++... ++..||||++.... ....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            457888899999999999999865 47889999997543 23346899999999999999999999998754     368


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      ++|+||++ |+|.+++..
T Consensus       106 ~iv~e~~~-~~L~~~l~~  122 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT  122 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH
T ss_pred             EEEEcccC-cCHHHHHHh
Confidence            99999997 699998854

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.68  E-value=1.5e-08  Score=104.06  Aligned_cols=94  Identities=24%  Similarity=0.327  Sum_probs=64.1

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe-
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE-  543 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~-  543 (579)
                      .......++|...+.||+|+||.||++... +++.||||++.... .....+..|+..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            344566688999999999999999999975 48899999986542 233467788888899999999999999876433 


Q ss_pred             ------EEEEEeccCCCCHHHHhc
Q 008046          544 ------SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ------~~lV~Ey~~~GsL~~~l~  561 (579)
                            .++||||+++ +|...+.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~  117 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCR  117 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHH
T ss_pred             cccceeEEEEeecccc-cHHHHHH
Confidence                  7899999975 5555443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.68  E-value=2.3e-08  Score=103.43  Aligned_cols=88  Identities=24%  Similarity=0.391  Sum_probs=73.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeE-----
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADES-----  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~-----  544 (579)
                      ++|...+.||+|+||.||++... +++.||||++....  ....+.+.+|+.++.+++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            56777789999999999999865 48899999997542  23356889999999999999999999999876654     


Q ss_pred             -EEEEeccCCCCHHHHhc
Q 008046          545 -MLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       545 -~lV~Ey~~~GsL~~~l~  561 (579)
                       ++|+||+. ++|.+++.
T Consensus       122 ~~lv~e~~~-~~l~~~~~  138 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMG  138 (371)
T ss_dssp             CEEEEECCC-EEHHHHTT
T ss_pred             EEEEEcccc-ccHHHHhh
Confidence             99999997 68888774

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.67  E-value=1e-08  Score=103.15  Aligned_cols=93  Identities=24%  Similarity=0.398  Sum_probs=69.5

Q ss_pred             HhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcc------cHHHHHHHHHHHhcC----CCCceeceeEEE
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ------GMEEFKNEVTLIARL----QHRNLVKLLGCC  538 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l----~H~nlv~l~g~~  538 (579)
                      ...++|...+.||+|+||.||++... +++.||+|.++.....      ....+.+|+.++.++    +|+||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            34567888899999999999999864 4889999999754221      223466789988888    899999999999


Q ss_pred             EECCeEEEEEec-cCCCCHHHHhcC
Q 008046          539 IQADESMLIYEY-MPNKSLDFFIFD  562 (579)
Q Consensus       539 ~~~~~~~lV~Ey-~~~GsL~~~l~~  562 (579)
                      ...+..++|+|| +++++|.+++..
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~  132 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITE  132 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHH
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHh
Confidence            988899999999 889999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.66  E-value=1.4e-08  Score=104.15  Aligned_cols=85  Identities=15%  Similarity=0.155  Sum_probs=72.0

Q ss_pred             ccccccceecccCceeEEEEEecC---------CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceec----------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE---------GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVK----------  533 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~----------  533 (579)
                      ++|...+.||+|+||.||++....         ++.||+|.+...     +.+.+|+.++.+++|||+++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            578888999999999999999753         788999998743     46889999999999999987          


Q ss_pred             -----eeEEEEE-CCeEEEEEeccCCCCHHHHhcCC
Q 008046          534 -----LLGCCIQ-ADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       534 -----l~g~~~~-~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                           +++++.. ....++||||+ +|+|.+++...
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  151 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS  151 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC
Confidence                 6778776 77899999999 99999999753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.65  E-value=2.4e-08  Score=102.43  Aligned_cols=88  Identities=24%  Similarity=0.389  Sum_probs=72.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCe------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE------  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~------  543 (579)
                      ++|...+.||+|+||.||++... +|+.||||.+....  ....+.+.+|+.++.+++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            56777789999999999999975 48899999997542  2335688999999999999999999999876553      


Q ss_pred             EEEEEeccCCCCHHHHhc
Q 008046          544 SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~  561 (579)
                      .++|+||++ |+|.+++.
T Consensus       104 ~~lv~e~~~-~~l~~~~~  120 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMG  120 (353)
T ss_dssp             CEEEEECCS-EEGGGTTT
T ss_pred             EEEEecccc-CCHHHHhc
Confidence            499999997 68887763

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.64  E-value=4.6e-08  Score=102.38  Aligned_cols=81  Identities=23%  Similarity=0.388  Sum_probs=63.4

Q ss_pred             cceecccCceeEEEEEec---CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEEEeccC
Q 008046          478 YNKLGEGGFGPVYKGTLV---EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLIYEYMP  552 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV~Ey~~  552 (579)
                      .++||+|+||.||++...   .+..||+|.+...  ...+.+.+|+.++.+++||||+++++++..  ....+||+||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            358999999999999965   4778999999743  233578999999999999999999999965  668999999996


Q ss_pred             CCCHHHHhc
Q 008046          553 NKSLDFFIF  561 (579)
Q Consensus       553 ~GsL~~~l~  561 (579)
                       |+|.+++.
T Consensus       104 -~~l~~~~~  111 (405)
T 3rgf_A          104 -HDLWHIIK  111 (405)
T ss_dssp             -EEHHHHHH
T ss_pred             -CCHHHHHH
Confidence             58887774

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.63  E-value=6.3e-08  Score=102.24  Aligned_cols=90  Identities=18%  Similarity=0.273  Sum_probs=75.2

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcC------CCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL------QHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l------~H~nlv~l~g~~~~~~~~~  545 (579)
                      .+|...++||+|+||.||++.... ++.||||+++.. ....+.+.+|+.++..+      .|+||+++++++......+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            467888899999999999998654 889999999753 33346788888888776      5779999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCC
Q 008046          546 LIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~~~  564 (579)
                      +|+||+. ++|.+++....
T Consensus       176 lv~e~~~-~~L~~~l~~~~  193 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNK  193 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTT
T ss_pred             EEEeccC-CCHHHHHHhcc
Confidence            9999996 79999987543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.63  E-value=2.2e-08  Score=103.40  Aligned_cols=90  Identities=23%  Similarity=0.396  Sum_probs=67.3

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------C
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------D  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~  542 (579)
                      .++|...+.||+|+||.||++... .++.||||++...  .....+.+.+|+.++..++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            357888889999999999999864 4889999999653  223456889999999999999999999998654      5


Q ss_pred             eEEEEEeccCCCCHHHHhcC
Q 008046          543 ESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..++|+||+ +++|.+++..
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             CCEEEEECC-CEECC-----
T ss_pred             eEEEEeccc-CCCHHHHHhc
Confidence            679999999 6899888754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.62  E-value=5.7e-08  Score=102.62  Aligned_cols=89  Identities=19%  Similarity=0.278  Sum_probs=73.4

Q ss_pred             cccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ..+|...+.||+|+||.|+.....+++.||||++.....   ..+.+|+.++.++ +|||||++++++......+||+||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            345777789999999996655555789999999965322   2356899999999 799999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC
Q 008046          551 MPNKSLDFFIFDID  564 (579)
Q Consensus       551 ~~~GsL~~~l~~~~  564 (579)
                      ++ |+|.+++....
T Consensus       100 ~~-g~L~~~l~~~~  112 (432)
T 3p23_A          100 CA-ATLQEYVEQKD  112 (432)
T ss_dssp             CS-EEHHHHHHSSS
T ss_pred             CC-CCHHHHHHhcC
Confidence            96 69999997543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.61  E-value=2.5e-08  Score=105.00  Aligned_cols=83  Identities=24%  Similarity=0.478  Sum_probs=66.0

Q ss_pred             cccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC----C--eEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA----D--ESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~----~--~~~l  546 (579)
                      .|...+.||+|+||.||++.... ++.||||++....    +.+.+|+.+|++++|+|||++++++...    +  ..++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            46677899999999999999854 8999999986532    2234799999999999999999988542    2  3678


Q ss_pred             EEeccCCCCHHHHhc
Q 008046          547 IYEYMPNKSLDFFIF  561 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~  561 (579)
                      |+||+++ +|.+++.
T Consensus       131 v~e~~~~-~l~~~~~  144 (420)
T 1j1b_A          131 VLDYVPE-TVYRVAR  144 (420)
T ss_dssp             EEECCCE-EHHHHHH
T ss_pred             ehhcccc-cHHHHHH
Confidence            9999975 6666554

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.61  E-value=7.7e-08  Score=97.99  Aligned_cols=87  Identities=24%  Similarity=0.190  Sum_probs=67.3

Q ss_pred             ccccccc-ceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHH-HHHhcCCCCceeceeEEEEE----CCeE
Q 008046          472 TDNFASY-NKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEV-TLIARLQHRNLVKLLGCCIQ----ADES  544 (579)
Q Consensus       472 t~~f~~~-~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~-~~l~~l~H~nlv~l~g~~~~----~~~~  544 (579)
                      .++|... +.||+|+||.||++... +++.||||.+... .    ...+|+ ..+..++|+|++++++++..    ....
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-P----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-H----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            3566664 46999999999999976 4889999999643 1    222333 33556799999999999876    3458


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++||||+++|+|.+++...
T Consensus       102 ~lv~e~~~gg~L~~~l~~~  120 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQER  120 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC
T ss_pred             EEEEeccCCCCHHHHHHhc
Confidence            9999999999999999754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.58  E-value=7.9e-08  Score=97.36  Aligned_cols=89  Identities=22%  Similarity=0.341  Sum_probs=75.2

Q ss_pred             ccccccceecccCceeEEEEEe--cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCC------ceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTL--VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHR------NLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~--~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~------nlv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++..  .+++.||||.++.. ....+.+.+|+.++..++|+      +++++++++...+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4677888999999999999986  35789999999743 33456788999999888665      499999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++||||+ +++|.+++...
T Consensus        93 ~lv~e~~-~~~l~~~l~~~  110 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKEN  110 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHT
T ss_pred             EEEEcCC-CCCHHHHHHhc
Confidence            9999999 89999998654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.57  E-value=1.2e-07  Score=94.33  Aligned_cols=88  Identities=22%  Similarity=0.354  Sum_probs=72.9

Q ss_pred             cccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEE-EECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC-IQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~-~~~~~~~lV~E  549 (579)
                      .++|...+.||+|+||.||++.. .+++.||||.+....  ..+.+.+|+.++..++|++++..+..+ ......++|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            45788889999999999999996 458899999987543  234689999999999988877666665 56778899999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+ +++|.+++..
T Consensus        86 ~~-~~~L~~~~~~   97 (296)
T 3uzp_A           86 LL-GPSLEDLFNF   97 (296)
T ss_dssp             CC-CCBHHHHHHH
T ss_pred             ec-CCCHHHHHHh
Confidence            99 9999999963

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.56  E-value=7.3e-08  Score=100.04  Aligned_cols=89  Identities=19%  Similarity=0.279  Sum_probs=72.4

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC--------CCceeceeEEEE----
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ--------HRNLVKLLGCCI----  539 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--------H~nlv~l~g~~~----  539 (579)
                      ++|...++||+|+||.||++... .++.||||+++.. ....+.+.+|+.++.+++        |+||+++++.+.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            56888889999999999999864 4789999999743 344568899999999885        788999999887    


Q ss_pred             ECCeEEEEEeccCCCCHHHHhcCC
Q 008046          540 QADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       540 ~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      .....++||||+ +++|.+++...
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~  138 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKS  138 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHT
T ss_pred             CCceEEEEEecc-CccHHHHHHhc
Confidence            345789999999 66777766543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.56  E-value=1.1e-07  Score=95.59  Aligned_cols=88  Identities=17%  Similarity=0.325  Sum_probs=63.0

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc-ccHH-HHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-QGME-EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-~~~~-~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      .++|...+.||+|+||.||++... +++.||||.+..... .... .+..+..++..++||||+++++++...+..++|+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            356777789999999999999975 588999999975432 2223 3444555678889999999999999999999999


Q ss_pred             eccCCCCHHHHh
Q 008046          549 EYMPNKSLDFFI  560 (579)
Q Consensus       549 Ey~~~GsL~~~l  560 (579)
                      ||+ ++.+..++
T Consensus       104 e~~-~~~~~~l~  114 (318)
T 2dyl_A          104 ELM-GTCAEKLK  114 (318)
T ss_dssp             CCC-SEEHHHHH
T ss_pred             ecc-CCcHHHHH
Confidence            999 45555544

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.54  E-value=8e-08  Score=95.46  Aligned_cols=89  Identities=21%  Similarity=0.351  Sum_probs=69.9

Q ss_pred             hcccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEE-EECCeEEEEE
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC-IQADESMLIY  548 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~-~~~~~~~lV~  548 (579)
                      ..++|...+.||+|+||.||++.. ..++.||||.+....  ..+.+.+|+.++..++|++++..+..+ ......++|+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            346788889999999999999996 458899999876432  224688999999999988877777665 5677889999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+ +|+|.+++..
T Consensus        85 e~~-~~~L~~~~~~   97 (296)
T 4hgt_A           85 ELL-GPSLEDLFNF   97 (296)
T ss_dssp             ECC-CCBHHHHHHH
T ss_pred             Ecc-CCCHHHHHHH
Confidence            999 9999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.52  E-value=1.2e-07  Score=98.97  Aligned_cols=81  Identities=25%  Similarity=0.482  Sum_probs=64.9

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCe------EEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADE------SML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~------~~l  546 (579)
                      ..|...+.||+|+||.||++....+..+|+|++.....    ...+|+.+++.++|+||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            45777789999999999999987777799998864322    22369999999999999999999865432      789


Q ss_pred             EEeccCCCCHH
Q 008046          547 IYEYMPNKSLD  557 (579)
Q Consensus       547 V~Ey~~~GsL~  557 (579)
                      ||||++++.+.
T Consensus       116 v~e~~~~~l~~  126 (394)
T 4e7w_A          116 VLEYVPETVYR  126 (394)
T ss_dssp             EEECCSEEHHH
T ss_pred             EeeccCccHHH
Confidence            99999865433

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.52  E-value=1.4e-07  Score=91.04  Aligned_cols=87  Identities=23%  Similarity=0.299  Sum_probs=67.0

Q ss_pred             ceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCc
Q 008046           82 GLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMD  160 (579)
Q Consensus        82 ~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~  160 (579)
                      -.|.+..+| |+|.++ +.+||.+|+... ....++|.++|||||+|. .++++|+|+++                    
T Consensus        28 f~l~f~~~gnl~ly~~-~~~vW~an~~~~-~~~~l~l~~dGnLvl~d~-~~~~vW~s~~~--------------------   84 (236)
T 1dlp_A           28 FRFTMQSDCNLVLFDS-DVRVWASNTAGA-TGCRAVLQSDGLLVILTA-QNTIRWSSGTK--------------------   84 (236)
T ss_dssp             EEEEECTTSCEEEEES-SSEEECCCCCSC-SCCBCCBCSSSCBCCBCT-TTCCSCCCCCC--------------------
T ss_pred             EEEEECCCCcEEEEEC-CEEEEECCCCCC-CCeEEEEcCCCcEEEEcC-CCcEEEeCCcc--------------------
Confidence            456677788 888886 689999998643 566889999999999996 56799999875                    


Q ss_pred             eEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCCCC
Q 008046          161 RHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSWNG  206 (579)
Q Consensus       161 ~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~~~  206 (579)
                                 .++|.|.+.|+++|+++++  .  ..+|.+..+..
T Consensus        85 -----------~~~~~~~~~l~d~Gnlvl~--~--~~~W~S~~~p~  115 (236)
T 1dlp_A           85 -----------GSIGNYVLVLQPDRTVTIY--G--PGLWDSGTSNK  115 (236)
T ss_dssp             -----------CCSSCCEEEECSSSCEEEE--C--SEEEECSCCCS
T ss_pred             -----------ccCCcEEEEEeCCCCEEEe--c--CCEEECCCCCC
Confidence                       0235678999999986664  2  27999876653

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.51  E-value=1.1e-07  Score=103.34  Aligned_cols=85  Identities=13%  Similarity=0.139  Sum_probs=63.0

Q ss_pred             ccceecccCceeEEEEEecCCcEEEEEEecCCCc--c------cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          477 SYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG--Q------GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~--~------~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ..+.||+|+||.||++.. .++.+++|+......  .      ..+.|.+|++++.+++||||+++..++...++.+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            346899999999999954 567889998653211  1      1345899999999999999998777777888889999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus       419 E~~~ggsL~~~l~~  432 (540)
T 3en9_A          419 SYINGKLAKDVIED  432 (540)
T ss_dssp             ECCCSEEHHHHSTT
T ss_pred             ECCCCCCHHHHHHH
Confidence            99999999998864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.51  E-value=1.8e-07  Score=96.56  Aligned_cols=89  Identities=15%  Similarity=0.164  Sum_probs=59.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHhcC--CCCceecee-------EEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG---QGMEEFKNEVTLIARL--QHRNLVKLL-------GCCI  539 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l--~H~nlv~l~-------g~~~  539 (579)
                      ..|...+.||+|+||.||++... +++.||||++.....   ...+.+..|+.++..+  +|||+++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            45777789999999999999965 588999999986432   2345677885444444  699977744       4443


Q ss_pred             EC-----------------CeEEEEEeccCCCCHHHHhcC
Q 008046          540 QA-----------------DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       540 ~~-----------------~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      ..                 ...+|||||++ |+|.+++..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  180 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST  180 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH
Confidence            32                 33799999998 999999975

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.50  E-value=1.5e-07  Score=97.57  Aligned_cols=93  Identities=22%  Similarity=0.299  Sum_probs=76.6

Q ss_pred             HhcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CC-----ceeceeEEEEECC
Q 008046          470 KATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HR-----NLVKLLGCCIQAD  542 (579)
Q Consensus       470 ~at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----nlv~l~g~~~~~~  542 (579)
                      ...++|...+.||+|+||.||++... +++.||||+++.. ....+++..|+.++..++ |+     +++++.+++...+
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            34578888899999999999999875 4788999999743 334567888998888874 55     4999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcCCC
Q 008046          543 ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ..+|||||++ |+|.+++....
T Consensus       130 ~~~lv~e~~~-~~L~~~l~~~~  150 (382)
T 2vx3_A          130 HLCLVFEMLS-YNLYDLLRNTN  150 (382)
T ss_dssp             EEEEEEECCC-CBHHHHHHHTT
T ss_pred             ceEEEEecCC-CCHHHHHhhcC
Confidence            9999999996 69999997543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.49  E-value=2.5e-07  Score=99.04  Aligned_cols=88  Identities=22%  Similarity=0.311  Sum_probs=72.6

Q ss_pred             cccccccceecccCceeEEEEEe-cCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCC-CceeceeEEEEECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH-RNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .++|...++||+|+||.||++.. .+++.||||++.....  .+++..|+.++..++| +++..+..++...+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            35688889999999999999996 4588999998874422  2468899999999976 566666777788889999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+ +++|.+++..
T Consensus        84 ~~-g~sL~~ll~~   95 (483)
T 3sv0_A           84 LL-GPSLEDLFNF   95 (483)
T ss_dssp             CC-CCBHHHHHHH
T ss_pred             CC-CCCHHHHHHh
Confidence            99 9999999964

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.47  E-value=9e-08  Score=96.74  Aligned_cols=92  Identities=27%  Similarity=0.403  Sum_probs=76.2

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc------ccHHHHHHHHHHHhcCC--CCceeceeEEEEEC
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQ--HRNLVKLLGCCIQA  541 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~--H~nlv~l~g~~~~~  541 (579)
                      ..++|...+.||+|+||.||++... +++.||||.++....      ...+.+.+|+.++.+++  |+|++++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            3456888889999999999999864 588999999974321      12246778999999996  59999999999999


Q ss_pred             CeEEEEEeccCC-CCHHHHhcC
Q 008046          542 DESMLIYEYMPN-KSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~-GsL~~~l~~  562 (579)
                      +..++|+||+.. ++|.+++..
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~  142 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITE  142 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHH
T ss_pred             CcEEEEEEcCCCCccHHHHHhc
Confidence            999999999976 899999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.47  E-value=1.6e-07  Score=96.81  Aligned_cols=89  Identities=20%  Similarity=0.331  Sum_probs=74.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-----------CCceeceeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-----------HRNLVKLLGCCIQ  540 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~nlv~l~g~~~~  540 (579)
                      ++|...+.||+|+||.||++... +++.||||.+... ....+.+.+|+.++.+++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            46778889999999999999964 5889999999743 334567889999998876           8999999999876


Q ss_pred             CC----eEEEEEeccCCCCHHHHhcCC
Q 008046          541 AD----ESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       541 ~~----~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ..    ..++|+||+ +++|.+++...
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~  123 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKY  123 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHh
Confidence            43    789999999 89999999753

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.42  E-value=2.6e-07  Score=91.64  Aligned_cols=86  Identities=19%  Similarity=0.161  Sum_probs=65.9

Q ss_pred             HHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCc------------------ccHHHHHHHHHHHhcCCCCc
Q 008046          469 AKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG------------------QGMEEFKNEVTLIARLQHRN  530 (579)
Q Consensus       469 ~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~n  530 (579)
                      ......|...+.||+|+||.||++...+|+.||+|.++....                  .....+.+|+.+|.+++  |
T Consensus        86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~  163 (282)
T 1zar_A           86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G  163 (282)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred             HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence            333445656689999999999999996689999999964321                  12457899999999999  4


Q ss_pred             eeceeEEEEECCeEEEEEeccCCCCHHH
Q 008046          531 LVKLLGCCIQADESMLIYEYMPNKSLDF  558 (579)
Q Consensus       531 lv~l~g~~~~~~~~~lV~Ey~~~GsL~~  558 (579)
                       +++.+++.. +..++||||+++|+|.+
T Consensus       164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          164 -LAVPKVYAW-EGNAVLMELIDAKELYR  189 (282)
T ss_dssp             -SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred             -CCcCeEEec-cceEEEEEecCCCcHHH
Confidence             666665433 45699999999999988

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.40  E-value=4.7e-07  Score=92.31  Aligned_cols=89  Identities=19%  Similarity=0.311  Sum_probs=73.4

Q ss_pred             ccccccceecccCceeEEEEEecC-C-cEEEEEEecCCCcccHHHHHHHHHHHhcCCCCc------eeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-G-QEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN------LVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n------lv~l~g~~~~~~~~  544 (579)
                      ++|...+.||+|+||.||++.... + +.||+|.++.. ....+.+.+|+.++.+++|++      ++.+.+++......
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            567888899999999999998643 4 68999999743 344567889999999887665      89999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ++||||+ +++|.+++...
T Consensus        98 ~lv~e~~-~~~l~~~l~~~  115 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKEN  115 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHT
T ss_pred             EEEEecc-CCChHHHHHhc
Confidence            9999999 67777777543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.12  E-value=2.4e-06  Score=93.27  Aligned_cols=84  Identities=14%  Similarity=0.114  Sum_probs=61.1

Q ss_pred             eecccCceeEEEEE-ecCCcEEEEEEecCCC----------cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGS----------GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       480 ~lG~G~fG~V~kg~-~~~g~~vAvK~l~~~~----------~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ..+.|++|.+.+.. +-.|+.+|+|.+....          ....++|.+|+++|+++ .|+||++++++.......|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45666666555443 2247889999996431          12245799999999999 799999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.++|...
T Consensus       321 MEyv~G~~L~d~i~~~  336 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG  336 (569)
T ss_dssp             EECCCSEEHHHHHHTT
T ss_pred             EecCCCCcHHHHHHhC
Confidence            9999999999999753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.75  E-value=3.2e-05  Score=75.36  Aligned_cols=83  Identities=14%  Similarity=0.121  Sum_probs=58.9

Q ss_pred             ccccceecccCceeEEEEEe-cCCcE--EEEEEecCCCcc------------------------cHHHHHHHHHHHhcCC
Q 008046          475 FASYNKLGEGGFGPVYKGTL-VEGQE--IAVKRLSKGSGQ------------------------GMEEFKNEVTLIARLQ  527 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~-~~g~~--vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~l~  527 (579)
                      +...+.||+|+||.||++.. .+|+.  ||||.++.....                        ....+.+|+.++.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            44567899999999999997 67888  999987533111                        0136889999999998


Q ss_pred             CCce--eceeEEEEECCeEEEEEeccCC-C----CHHHHhc
Q 008046          528 HRNL--VKLLGCCIQADESMLIYEYMPN-K----SLDFFIF  561 (579)
Q Consensus       528 H~nl--v~l~g~~~~~~~~~lV~Ey~~~-G----sL~~~l~  561 (579)
                      |+++  ..++..    ...+|||||+.+ |    +|.+++.
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~  165 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR  165 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh
Confidence            8754  333432    346899999942 4    6776654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.56  E-value=8.8e-05  Score=77.54  Aligned_cols=58  Identities=16%  Similarity=0.125  Sum_probs=45.8

Q ss_pred             hcccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCC
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQH  528 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H  528 (579)
                      .+..|...+.||+|+||.||++... +++.||||++....   ....+.|.+|+.++..++|
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            3445777789999999999999954 58999999987332   2335789999999999987

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.40  E-value=4.3e-05  Score=78.56  Aligned_cols=84  Identities=8%  Similarity=0.088  Sum_probs=53.3

Q ss_pred             ccccceecccCceeEEEEEecCCcEEEEEEecCCCc--------------ccHHHH--------HHHHHHHhcCCCCcee
Q 008046          475 FASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG--------------QGMEEF--------KNEVTLIARLQHRNLV  532 (579)
Q Consensus       475 f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~--------------~~~~~f--------~~E~~~l~~l~H~nlv  532 (579)
                      +.....||+|+||.||++...+|+.||||.++....              ......        ..|...|.++++..+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            667789999999999999988899999998753210              011122        2345555555443332


Q ss_pred             ceeEEEEECCeEEEEEeccCCCCHHHHh
Q 008046          533 KLLGCCIQADESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       533 ~l~g~~~~~~~~~lV~Ey~~~GsL~~~l  560 (579)
                      -...+...  ..+|||||++++.|..+.
T Consensus       177 vp~p~~~~--~~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          177 VPEPIAQS--RHTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             CCCEEEEE--TTEEEEECCSCEEGGGCC
T ss_pred             CCeeeecc--CceEEEEecCCccHhhhc
Confidence            21111111  236999999988886654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.80  E-value=0.0028  Score=61.31  Aligned_cols=89  Identities=11%  Similarity=-0.009  Sum_probs=69.1

Q ss_pred             hcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEe
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ...++.....++.|+.+.||+.... ++.+++|............+.+|+.++..+. |..+.+++++....+..++|||
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            3355665567788888999998754 6789999986422122346889999999884 6778899999988889999999


Q ss_pred             ccCCCCHHHHh
Q 008046          550 YMPNKSLDFFI  560 (579)
Q Consensus       550 y~~~GsL~~~l  560 (579)
                      |+++.+|.+.+
T Consensus        91 ~i~G~~l~~~~  101 (263)
T 3tm0_A           91 EADGVLCSEEY  101 (263)
T ss_dssp             CCSSEEHHHHC
T ss_pred             ecCCeehhhcc
Confidence            99999998753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.55  E-value=0.0097  Score=56.96  Aligned_cols=75  Identities=16%  Similarity=0.206  Sum_probs=57.1

Q ss_pred             eec-ccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCc--eeceeEEEEECCeEEEEEeccCCCCH
Q 008046          480 KLG-EGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN--LVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       480 ~lG-~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--lv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      .++ .|..+.||+....+|..+++|.....   ....+..|+.++..+.+.+  +.+++++...++..++||||+++.+|
T Consensus        26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            444 55569999998767788999987643   2246788999988885444  55688887777778999999999887


Q ss_pred             H
Q 008046          557 D  557 (579)
Q Consensus       557 ~  557 (579)
                      .
T Consensus       103 ~  103 (264)
T 1nd4_A          103 L  103 (264)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=91.84  E-value=0.36  Score=46.98  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=57.0

Q ss_pred             cccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCC---CceeceeEEEEECCeEEEEEec
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH---RNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H---~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .+...+.+|.|....||+..+.+|+.+.+|+...........|..|+..|..+..   ..+.++++.  ..  .++|+||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEe
Confidence            3455578999999999999999999999998765443444568899998887742   234455543  22  3688999


Q ss_pred             cCCCCH
Q 008046          551 MPNKSL  556 (579)
Q Consensus       551 ~~~GsL  556 (579)
                      ++.+..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            987653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=90.62  E-value=0.19  Score=50.74  Aligned_cols=80  Identities=16%  Similarity=0.261  Sum_probs=56.0

Q ss_pred             ccceecccCceeEEEEEecCCcEEEEEEec--CCC-cccHHHHHHHHHHHhcCC--CCceeceeEEEEEC---CeEEEEE
Q 008046          477 SYNKLGEGGFGPVYKGTLVEGQEIAVKRLS--KGS-GQGMEEFKNEVTLIARLQ--HRNLVKLLGCCIQA---DESMLIY  548 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~--~~~-~~~~~~f~~E~~~l~~l~--H~nlv~l~g~~~~~---~~~~lV~  548 (579)
                      ..+.|+.|.+..||+....+ ..+++|+..  ... ......+.+|..++..+.  +..+.++++++...   +..++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            34678999999999988654 577888765  321 122357888999999886  45678889888765   3478999


Q ss_pred             eccCCCCHH
Q 008046          549 EYMPNKSLD  557 (579)
Q Consensus       549 Ey~~~GsL~  557 (579)
                      ||+++..+.
T Consensus       121 e~v~G~~l~  129 (359)
T 3dxp_A          121 EFVSGRVLW  129 (359)
T ss_dssp             ECCCCBCCC
T ss_pred             EecCCeecC
Confidence            999987763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=86.98  E-value=2  Score=40.84  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=57.0

Q ss_pred             eecccCce-eEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEEEEeccCCCCH
Q 008046          480 KLGEGGFG-PVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESMLIYEYMPNKSL  556 (579)
Q Consensus       480 ~lG~G~fG-~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~lV~Ey~~~GsL  556 (579)
                      .+..|..| .||+-.... +..+.+|+-..   ....++.+|..+|+.+. +-.+.++++++...+..++|||++++.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            44455555 588876544 56788887653   23457889999988774 44577889999989999999999998887


Q ss_pred             HHHh
Q 008046          557 DFFI  560 (579)
Q Consensus       557 ~~~l  560 (579)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=86.78  E-value=2  Score=42.40  Aligned_cols=76  Identities=21%  Similarity=0.174  Sum_probs=59.4

Q ss_pred             ccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC---CCceeceeEEEEECCeEEEEEeccCC
Q 008046          477 SYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ---HRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ..+.|+.|....+|+... +++.+.+|....   .....|..|...|..+.   ...+.++++++...+..++||||+++
T Consensus        40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND-EVQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEEEECCSSSSEEEEEES-SSCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eeEEeCCccceeeeEEEE-CCCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            445789999999999875 466788887653   23567889998888773   36788888888777889999999998


Q ss_pred             CCH
Q 008046          554 KSL  556 (579)
Q Consensus       554 GsL  556 (579)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=84.49  E-value=1.2  Score=45.33  Aligned_cols=75  Identities=9%  Similarity=0.172  Sum_probs=49.1

Q ss_pred             cceecccCceeEEEEEec-CCcEEEEEEecCCCc-------ccHHHHHHHHHHHhcCCC--C-ceeceeEEEEECCeEEE
Q 008046          478 YNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG-------QGMEEFKNEVTLIARLQH--R-NLVKLLGCCIQADESML  546 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~-nlv~l~g~~~~~~~~~l  546 (579)
                      .+.||.|..+.||+.... .++.++||.......       ...+.+..|.+++..+.+  + .+.+++.+  ..+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            357899999999999764 367899998653211       123456788888877632  3 34455544  3455689


Q ss_pred             EEeccCCC
Q 008046          547 IYEYMPNK  554 (579)
Q Consensus       547 V~Ey~~~G  554 (579)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=84.26  E-value=0.14  Score=53.93  Aligned_cols=59  Identities=10%  Similarity=0.144  Sum_probs=17.5

Q ss_pred             ceecccCceeEEEEEecC-CcEEEE------EEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE
Q 008046          479 NKLGEGGFGPVYKGTLVE-GQEIAV------KRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ  540 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~-g~~vAv------K~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~  540 (579)
                      ++||   ||.||+|.+.. ..+|||      |..+..  ..+....|.+|..++.+.+|+|+++..++...
T Consensus       148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            4666   99999999864 357888      776543  22344579999999999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	579
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-24
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-24
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-24
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-23
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-22
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-21
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	7e-21
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-20
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-19
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-19
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-18
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	4e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-17
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-17
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-17
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-17
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-16
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-16
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-15
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	1e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-14
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	3e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-14
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	6e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-12
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-11
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	1e-10
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-10
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	5e-09

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 2e-24
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 453 HMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQG 512
             +++   WE          +      +LG G FG V+ G      ++AVK L +GS   
Sbjct: 3   WWEDE---WEVPR-------ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MS 51

Query: 513 MEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGL 568
            + F  E  L+ +LQH+ LV+L     Q +   +I EYM N SL  F+       L
Sbjct: 52  PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKL 106

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-24
 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
                  ++G G FG V+ G  +   ++A+K + +G+    E+F  E  ++ +L H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLV 63

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFIFDIDW 565
           +L G C++     L++E+M +  L  ++     
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 96

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 9e-24
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLV 532
            +     +LG G FG V  G      ++A+K + +GS    +EF  E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFFIF 561
           +L G C +     +I EYM N  L  ++ 
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLR 91

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (241), Expect = 4e-23
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           W  +                +G+G FG V  G    G ++AVK +   +    + F  E 
Sbjct: 2   WALNM-------KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEA 51

Query: 521 TLIARLQHRNLVKLLGCCIQADESM-LIYEYMPNKSLDFFIFD 562
           +++ +L+H NLV+LLG  ++    + ++ EYM   SL  ++  
Sbjct: 52  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 94

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 1e-22
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE                 ++G G FG VYKG       + +  ++  + Q ++ FKNEV
Sbjct: 3   WEIPD-------GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 55

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDID 564
            ++ + +H N++  +G      +  ++ ++    SL   +  I+
Sbjct: 56  GVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIE 98

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.9 bits (238), Expect = 1e-22
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNE 519
           WE +         +    +KLG G +G VY+G   +    +AVK L + + + +EEF  E
Sbjct: 12  WEMER-------TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 63

Query: 520 VTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGL 568
             ++  ++H NLV+LLG C +     +I E+M   +L  ++ + +   +
Sbjct: 64  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.1 bits (236), Expect = 5e-22
 Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 2/94 (2%)

Query: 471 ATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGM-EEFKNEVTLIARLQH 528
             D+F   ++LG G  G V+K +    G  +A K +       +  +   E+ ++     
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
             +V   G      E  +  E+M   SLD  +  
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 94.7 bits (235), Expect = 5e-22
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQG---MEEFKNEVTLIARLQ 527
              F+   ++G G FG VY    V   + +A+K++S    Q     ++   EV  + +L+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           H N ++  GC ++   + L+ EY    + D   
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.4 bits (234), Expect = 5e-22
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 14/114 (12%)

Query: 463 FDFASIAKATDNFASY---------NKLGEGGFGPVYKGTLV----EGQEIAVKRLSKG- 508
           F F    +A   FA             +G G FG V  G L         +A+K L  G 
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 509 SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           + +   +F +E +++ +  H N++ L G   ++   M+I E+M N SLD F+  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 120

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (233), Expect = 6e-22
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 471 ATDNFASYN-KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGSGQG-MEEFKNEVTLIAR 525
             DN    + +LG G FG V +G      +  ++A+K L +G+ +   EE   E  ++ +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           L +  +V+L+G C QA+  ML+ E      L  F+  
Sbjct: 66  LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG 101

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 1e-21
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 9/112 (8%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEV 520
           WE          ++     KLG+G FG V+ GT      +A+K L  G+    E F  E 
Sbjct: 12  WEIPR-------ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEA 63

Query: 521 TLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTR 572
            ++ +L+H  LV+L     + +   ++ EYM   SL  F+       L L +
Sbjct: 64  QVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 114

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.1 bits (231), Expect = 1e-21
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 1/92 (1%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRN 530
            D +    +LG+G FG VYK    E     A K +   S + +E++  E+ ++A   H N
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           +VKLL      +   ++ E+    ++D  + +
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 102

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 3e-21
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 16/118 (13%)

Query: 452 SHMKEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRL 505
           + +  D + WEF         +  +    LG G FG V + T            +AVK L
Sbjct: 10  TQLPYDHK-WEFPR-------NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61

Query: 506 SKGSGQG-MEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIF 561
              +     E   +E+ +++ L  H N+V LLG C     +++I EY     L  F+ 
Sbjct: 62  KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 119

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 3e-21
 Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 467 SIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIAR 525
           S+      +  + K+G+G  G VY    V  GQE+A+++++       E   NE+ ++  
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
            ++ N+V  L   +  DE  ++ EY+   SL   + +   +
Sbjct: 74  NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD 114

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 92.1 bits (228), Expect = 7e-21
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
           D++  + +LG G FG V++ T    G   A K +        E  + E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           V L       +E ++IYE+M    L   + D
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 116

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 4e-20
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSK---GSGQGMEEFKNEVTLIAR 525
            +     KLG+G FG V +G       +   +AVK L        + M++F  EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           L HRNL++L G  +      ++ E  P  SL   +  
Sbjct: 68  LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK 103

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 89.7 bits (222), Expect = 4e-20
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
           D +    +LG G FG V++      G+    K ++          KNE++++ +L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           + L        E +LI E++    L   I
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRI 117

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 4e-20
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 479 NKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGSGQG-MEEFKNEVTLIARLQHRNLVK 533
             +G G FG VY GTL++        AVK L++ +  G + +F  E  ++    H N++ 
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92

Query: 534 LLGCCIQADES-MLIYEYMPNKSLDFFIF 561
           LLG C++++ S +++  YM +  L  FI 
Sbjct: 93  LLGICLRSEGSPLVVLPYMKHGDLRNFIR 121

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 4e-20
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 479 NKLGEGGFGPVYKGTLVE---GQEIAVKRLSKGSGQG--MEEFKNEVTLIARLQHRNLVK 533
            +LG G FG V KG        + +AVK L   +      +E   E  ++ +L +  +V+
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72

Query: 534 LLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           ++G C +A+  ML+ E      L+ ++  
Sbjct: 73  MIGIC-EAESWMLVMEMAELGPLNKYLQQ 100

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.8 bits (219), Expect = 5e-20
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 14/122 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKG-SGQGM 513
           WE          +      +LG+G FG VY+G             +A+K +++  S +  
Sbjct: 15  WEVAR-------EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 67

Query: 514 EEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRS 573
            EF NE +++      ++V+LLG   Q   +++I E M    L  ++  +          
Sbjct: 68  IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 127

Query: 574 SK 575
           + 
Sbjct: 128 AP 129

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.4 bits (218), Expect = 6e-20
 Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGSGQGME 514
            E+         +N      +GEG FG V++              +AVK L + +   M+
Sbjct: 8   LEY-------PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 515 -EFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRS 573
            +F+ E  L+A   + N+VKLLG C       L++EYM    L+ F+  +  + +     
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120

Query: 574 SKSH 577
           S   
Sbjct: 121 SDLS 124

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 6e-20
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTL------VEGQEIAVKRLSKGSGQG-M 513
           WEF         +N      LG G FG V   T           ++AVK L + +     
Sbjct: 32  WEFPR-------ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER 84

Query: 514 EEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           E   +E+ ++ +L  H N+V LLG C  +    LI+EY     L  ++  
Sbjct: 85  EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.4 bits (216), Expect = 1e-19
 Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-FKNEVTLIARLQHR 529
            D +   + LG G F  V         + +A+K ++K + +G E   +NE+ ++ +++H 
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           N+V L           LI + +    L   I
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRI 98

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 1e-19
 Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 470 KATDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKG---SGQGMEEFKNEVTLIAR 525
           K  ++F     LGEG F  V     L   +E A+K L K        +     E  +++R
Sbjct: 5   KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           L H   VKL       ++      Y  N  L  +I  
Sbjct: 65  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 101

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 4e-19
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGM-EEFKNEVTLIARLQHRN 530
           +++     LGEG +G V         + +AVK +         E  K E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           +VK  G   + +   L  EY     L   I  
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP 96

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 5e-19
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 480 KLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCI 539
            +G+G FG V++G    G+E+AVK  S    +     + E+     L+H N++  +    
Sbjct: 10  SIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADN 67

Query: 540 QADES----MLIYEYMPNKSLDFFI 560
           + + +     L+ +Y  + SL  ++
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSLFDYL 92

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 5e-19
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 5/111 (4%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHR 529
           +++     +G G +G   K      G+ +  K L  GS      +   +EV L+  L+H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 530 NLVKLLGCCIQADESM--LIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHI 578
           N+V+     I    +   ++ EY     L   I         L       +
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 114

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 6e-19
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEG---QEIAVKRLSK-GSGQGMEEFKNEVTLIARL-Q 527
           ++    + +GEG FG V K  + +     + A+KR+ +  S     +F  E+ ++ +L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           H N++ LLG C       L  EY P+ +L  F+
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 102

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 84.8 bits (209), Expect = 2e-18
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQ- 527
           ++F+ +  +G GGFG VY     + G+  A+K L K      QG     NE  +++ +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 528 --HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSHI 578
                +V +       D+   I + M    L + +           R   + I
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 116

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 3e-18
 Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGM-EEFKNEVTLIARLQHR 529
              + + + +GEG +G V      V    +A+K++S    Q   +    E+ ++ R +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNG 567
           N++ +           +   Y+    +   ++ +    
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ 104

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 3e-18
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGSGQGM-EE 515
           +E          +       +GEG FG V++G  +        +A+K     +   + E+
Sbjct: 2   YEIQR-------ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 54

Query: 516 FKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
           F  E   + +  H ++VKL+G   + +   +I E      L  F+    ++
Sbjct: 55  FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS 104

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 3e-18
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLL 535
            ++G G F  VYKG   E   E+A   L     +    + FK E  ++  LQH N+V+  
Sbjct: 15  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74

Query: 536 GCCIQADES----MLIYEYMPNKSLDFFIFD 562
                  +     +L+ E M + +L  ++  
Sbjct: 75  DSWESTVKGKKCIVLVTELMTSGTLKTYLKR 105

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 78.1 bits (192), Expect = 4e-18
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 27  IRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNV 86
           + +GE L     + ++  +         L ++       T  W +N             +
Sbjct: 4   LTNGEGL-YAGQSLDVEPYHFIMQEDCNLVLYD----HSTSVWASNTGILGKKGCKA-VL 57

Query: 87  TSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDH 140
            S G  V+ D   R  W+S++     N V+ L + GN+V+    Y S +W +  +
Sbjct: 58  QSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI----YGSDIWSTGTY 108

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 80.9 bits (199), Expect = 1e-17
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 8/97 (8%)

Query: 472 TDNFASYNKLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQG---MEEFKNEVTLIARLQ 527
           +D +     LG GG   V+    L   +++AVK L     +       F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 528 HRNLVKLLGCCIQADES----MLIYEYMPNKSLDFFI 560
           H  +V +         +     ++ EY+   +L   +
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 1e-17
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH 528
           ++F     LG+G FG VY     +    +A+K L K          + + EV + + L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
            N+++L G    A    LI EY P  ++   +  
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 99

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 5e-17
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 461 WEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE--------GQEIAVKRLSKG-SGQ 511
           WE          D       LGEG FG V     +           ++AVK L    + +
Sbjct: 8   WELPR-------DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 60

Query: 512 GMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLML 570
            + +  +E+ ++  + +H+N++ LLG C Q     +I EY    +L  ++      GL  
Sbjct: 61  DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 120

Query: 571 TRSSKS 576
           + +   
Sbjct: 121 SYNPSH 126

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 5e-17
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
           + +     LG G FG V++       +    K +    G      K E++++   +HRN+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNI 63

Query: 532 VKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           + L       +E ++I+E++    +   I
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERI 92

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.8 bits (196), Expect = 5e-17
 Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH 528
            +F     LG G FG V+       G+  A+K L K      + +E   +E  +++ + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTR 572
             ++++ G    A +  +I +Y+    L   +         + +
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK 107

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 7e-17
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 468 IAKATDNFASYNKLGEGGFGPVYKGTLVEGQE-----IAVKRLSKG-SGQGMEEFKNEVT 521
           I K T+ F     LG G FG VYKG  +   E     +A+K L +  S +  +E  +E  
Sbjct: 5   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63

Query: 522 LIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           ++A + + ++ +LLG C+      LI + MP   L  ++ +
Sbjct: 64  VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVRE 103

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 78.8 bits (193), Expect = 9e-17
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVK--RLSKGSGQGMEEFKNEVTLIARLQHRN 530
           + +    K+GEG +G VYK     G+  A+K  RL K           E++++  L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFIF 561
           +VKL          +L++E++          
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV 92

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 1e-16
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVEGQE-----IAVKRLSKGSGQGM-EEFKNEVTLIARL 526
                   +G G FG VYKG L          +A+K L  G  +    +F  E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 527 QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
            H N+++L G   +    M+I EYM N +LD F+ + D  
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE 106

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 2e-16
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 479 NKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE-----FKNEVTLIARLQHRNLV 532
           + LGEG F  VYK       Q +A+K++  G     ++        E+ L+  L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 533 KLLGCCIQADESMLIYEYMPNKSLDFF 559
            LL          L++++M        
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII 90

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 3e-16
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGS------GQGMEEFKNEVTLIAR 525
           D + +  +LG G F  V K      G + A K + K        G   E+ + EV+++  
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 526 LQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           +QH N++ L        + +LI E +    L  F+ +
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE 106

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 6e-16
 Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 11/104 (10%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNL 531
            ++     +G G FG VY+  L + G+ +A+K++ +           E+ ++ +L H N+
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNI 75

Query: 532 VKLLGCCIQADESM------LIYEYMPNKSLDFFIFDIDWNGLM 569
           V+L      + E        L+ +Y+P                +
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 7e-16
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHR 529
           +NF    K+GEG +G VYK      G+ +A+K++     +         E++L+  L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFF 559
           N+VKLL      ++  L++E++      F 
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 3e-15
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 5/95 (5%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG---QGMEEFKNEVTLIAR-LQ 527
           ++F  +  LG+G FG V+     +  Q  A+K L K        +E    E  +++   +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 528 HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           H  L  +       +    + EY+    L + I  
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS 96

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 68.1 bits (166), Expect = 1e-14
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 16/123 (13%)

Query: 18  NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPL 77
           ++ +   +++  GE L    G+F              L ++          W  N     
Sbjct: 1   DNILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYD----VDKPIWATNTGGLS 49

Query: 78  TDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS 137
                L   T   +V+ +  ++  W+SNT     N V  L    N+V+    Y +  W +
Sbjct: 50  RS-CFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVI----YGTDRWAT 104

Query: 138 FDH 140
             H
Sbjct: 105 GTH 107

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-14
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 16/115 (13%)

Query: 457 DMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGT------LVEGQEIAVKRLSKGSG 510
           D   WEF         D       LG G FG V +            + +AVK L +G+ 
Sbjct: 4   DASKWEFPR-------DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 56

Query: 511 QG-MEEFKNEVTLIAR-LQHRNLVKLLGCCIQADES-MLIYEYMPNKSLDFFIFD 562
                   +E+ ++     H N+V LLG C +     M+I E+    +L  ++  
Sbjct: 57  HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 111

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 67.3 bits (164), Expect = 3e-14
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 3/92 (3%)

Query: 57  IWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQ 116
           I Y            +    L      L++ +   ++L  RD   WS+NT+         
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRAV 71

Query: 117 LMDSGNLVLTDGNYNSLLWQSFD--HPCDTLL 146
           L  +G + +     N  +W S +       + 
Sbjct: 72  LQPNGRMDVLTNQ-NIAVWTSGNSRSAGRYVF 102

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 70.9 bits (173), Expect = 4e-14
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGM---------EEFKNEVTL 522
           +N+     LG G    V +       +E AVK +    G            E    EV +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 523 IARLQ-HRNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           + ++  H N+++L           L+++ M    L  ++
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 101

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 66.0 bits (160), Expect = 6e-14
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 14/125 (11%)

Query: 19  DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLT 78
           D +     +  G +L    G +     +          + Y         W +      +
Sbjct: 2   DRLNSGHQLDTGGSLA--EGGYLFIIQNDCNL------VLY---DNNRAVWASGTNGKAS 50

Query: 79  DQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSF 138
                L + + G +++    R  W+SNT+    N  + L    N+V+ D + N+ +W + 
Sbjct: 51  GCV--LKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNS-NNAIWATH 107

Query: 139 DHPCD 143
            +  +
Sbjct: 108 TNVGN 112

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 7e-14
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEE------FKNEVTLIARLQ--HRN 530
            LG GGFG VY G  V     +A+K + K       E         EV L+ ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 531 LVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
           +++LL    + D  +LI E        F  
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDF 100

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.1 bits (168), Expect = 2e-13
 Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 453 HMKEDMELWEFDFASIA-KATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSG 510
           +     E W+++   +     D++    KLG G +  V++   +   +++ VK L     
Sbjct: 14  NTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK- 72

Query: 511 QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESM--LIYEYMPNKSLDFFI 560
              ++ K E+ ++  L+   N++ L             L++E++ N       
Sbjct: 73  --KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 123

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.3 bits (166), Expect = 3e-13
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 480 KLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           K+G G FG +Y GT +  G+E+A+K     +     +   E  +   +Q    +  +  C
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 539 IQADESMLIYEYMPNKSLDFF 559
               +  ++   +   SL+  
Sbjct: 72  GAEGDYNVMVMELLGPSLEDL 92

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 3e-13
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLG 536
            +G G +G V        G ++A+K+L +   S    +    E+ L+  ++H N++ LL 
Sbjct: 25  PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84

Query: 537 CCIQAD------ESMLIYEYMPNKSLDF 558
                +      +  L+  +M       
Sbjct: 85  VFTPDETLDDFTDFYLVMPFMGTDLGKL 112

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 6e-13
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 4/92 (4%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQH 528
           ++F     LG+G FG V        G+  A+K L K    +   +     E  ++   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFI 560
             L  L       D    + EY     L F +
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 7e-13
 Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 11/104 (10%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQG--MEEFKNEVTLIARLQHR 529
             +    K+G+G FG V+K    + GQ++A+K++   + +         E+ ++  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 530 NLVKLLGCCIQADESM--------LIYEYMPNKSLDFFIFDIDW 565
           N+V L+  C               L++++  +         +  
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 113

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 8e-13
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQH 528
            + + + + +G G +G V      + G  +AVK+LS+   S    +    E+ L+  ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 529 RNLVKLLGCCIQADESMLIYEYM 551
            N++ LL     A       +  
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVY 99

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 2e-12
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 3/97 (3%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHR 529
             +    K+GEG +G V+K    E  + +A+KR+               E+ L+  L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 530 NLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
           N+V+L        +  L++E+       +F       
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL 98

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 2e-12
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 481 LGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCC 538
           LG G  G V +       ++ A+K L         + + EV L  R  Q  ++V+++   
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVY 74

Query: 539 IQADES----MLIYEYMPNKSLDFFIFD 562
                     +++ E +    L   I D
Sbjct: 75  ENLYAGRKCLLIVMECLDGGELFSRIQD 102

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 2e-12
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 9/96 (9%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLG 536
            +G G  G V      V  + +A+K+LS+   +    +    E+ L+  + H+N++ LL 
Sbjct: 24  PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83

Query: 537 CCI------QADESMLIYEYMPNKSLDFFIFDIDWN 566
                    +  +  L+ E M          ++D  
Sbjct: 84  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 119

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 3e-12
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 473 DNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGS----GQGMEEFKNEVTLIA 524
           +NF     LG G +G V+    +     G+  A+K L K +     +  E  + E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 525 RLQHR-NLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
            ++    LV L        +  LI +Y+    L   +  
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ 122

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 64.1 bits (155), Expect = 8e-12
 Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           ++GEG FG +++GT L+  Q++A+K   + S     + ++E      L     +  +   
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 539 IQADESMLIYEYMPNKSLDFFI 560
            Q     ++   +   SL+  +
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLL 91

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.1 bits (155), Expect = 1e-11
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 455 KEDMELWEFDFASIAKATDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SG 510
           ++ ++ WE    + A+  D F     LG G FG V      E G   A+K L K      
Sbjct: 24  EDFLKKWETPSQNTAQ-LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82

Query: 511 QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFD 562
           + +E   NE  ++  +    LVKL           ++ EY+    +   +  
Sbjct: 83  KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 1e-11
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 470 KATDNFASYNKLGEGGFGPVYKGTLVE--GQEIAVKRLSKGSGQGM--EEFKNEVTLIAR 525
           +A   +    ++GEG +G V+K   ++  G+ +A+KR+   +G+         EV ++  
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63

Query: 526 L---QHRNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWN 566
           L   +H N+V+L   C  +         +  + +D  +      
Sbjct: 64  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 107

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 57.3 bits (138), Expect = 1e-10
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 20/130 (15%)

Query: 11  ILGASAANDNITPSQSIRDGETL--VSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVA 68
           I+ +   +DN    Q +   E+L  +     +     +        L ++          
Sbjct: 3   IIFSKQPDDN--HPQILHATESLEILFGTHVYRFIMQTDCN-----LVLY----DNNNPI 51

Query: 69  WVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTD 127
           W  N             +   G +V++   +   W S  +    + V+ L    N+V+  
Sbjct: 52  WATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVI-- 107

Query: 128 GNYNSLLWQS 137
             Y   LW +
Sbjct: 108 --YGDALWAT 115

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 14/90 (15%)

Query: 479 NKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS----------GQGMEEFKNEVTLIARLQH 528
             +GEG    V+     +  E  VK    G             G   F       AR + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 529 RNLVKLLGCCIQ----ADESMLIYEYMPNK 554
           R L KL G  +      + + ++ E +  K
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAK 95

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.3 bits (142), Expect = 4e-10
 Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 480 KLGEGGFGPVYKGT-LVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCC 538
           KLG G F  V+    +V    +A+K +        E  ++E+ L+ R+   +  K     
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 539 IQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSH 577
                 +L +      +    +   +  G  L    K +
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY 117

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 52.3 bits (125), Expect = 5e-09
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 2/84 (2%)

Query: 57  IWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKGIVLLDGRDRIFWSSNTSITMKNPVVQ 116
           I +      +     +    L   S    + S   ++L   D   W+SNT+         
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRVWASNTAGA-TGCRAV 61

Query: 117 LMDSGNLVLTDGNYNSLLWQSFDH 140
           L   G LV+     N++ W S   
Sbjct: 62  LQSDGLLVILTAQ-NTIRWSSGTK 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	579
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.83
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.81
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.8
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.7
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.58
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.56
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.54
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.53
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.51
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.51
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.49
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.48
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.46
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.45
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.45
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.44
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.44
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.43
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.43
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.42
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.41
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.4
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.4
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.39
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.39
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.38
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.38
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.38
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.36
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.36
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.36
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.34
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.33
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.32
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.31
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.31
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.31
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.31
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.29
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.28
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.27
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.27
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.26
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.24
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.24
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.23
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.22
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.2
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.19
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.16
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.14
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.14
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.12
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.04
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.02
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.02
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.01
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.99
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.99
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.99
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.98
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.95
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	98.93
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	98.92
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	98.89
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.85
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.85
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.76
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.63
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.1
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.06
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.05
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	89.81
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	88.88
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	88.29
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	86.05
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	83.27
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	82.87
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	82.51
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	81.97
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	81.17

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.83  E-value=1.9e-20  Score=157.58  Aligned_cols=111  Identities=20%  Similarity=0.417  Sum_probs=93.4

Q ss_pred             ccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcC
Q 008046           18 NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDG   96 (579)
Q Consensus        18 ~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~   96 (579)
                      +|+|.|||.|..|++|+|  |.|+|.|...++     |.++.    ..++||.||++.|..  .+.+.++.+| |+|.|+
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~~--~~~l~l~~dGnLvl~~~   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYD----NNRAVWASGTNGKAS--GCVLKMQNDGNLVIYSG   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSCS--SEEEEECTTSCEEEEET
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEc----CCcEEEEccCccCCC--CcEEEEeccccEEEEec
Confidence            589999999999999975  999999998775     55554    468999999998854  3679999999 999997


Q ss_pred             CCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCC
Q 008046           97 RDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCD  143 (579)
Q Consensus        97 ~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTD  143 (579)
                       +..+|++++........|+|+|+|||||++. .+.++|||+.+|++
T Consensus        68 -~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~-~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 -SRAIWASNTNRQNGNYYLILQRDRNVVIYDN-SNNAIWATHTNVGN  112 (112)
T ss_dssp             -TEEEEECCCCCSCCCCEEEECTTSCEEEECT-TSCEEEECCCCCCC
T ss_pred             -CCeEEEEeeccCCCceEEEEcCCCCEEEECC-CCcEEecCCCccCC
Confidence             5677877765545667899999999999996 56789999999985

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.81  E-value=1.8e-19  Score=150.20  Aligned_cols=106  Identities=20%  Similarity=0.314  Sum_probs=90.1

Q ss_pred             cccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCC
Q 008046           19 DNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGR   97 (579)
Q Consensus        19 ~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~   97 (579)
                      |+|.+|+.|.+|+.|.  +|.|.|+|...++     |.++.    ..++||+||++.|... .+.|.++.+| |+|.|++
T Consensus         2 ~~L~~g~~L~~g~~l~--~g~~~l~~q~dgn-----Lvl~~----~~~~vW~ant~~~~~~-~~~l~l~~dGnLvl~~~~   69 (109)
T d1kj1a_           2 NLLTNGEGLYAGQSLD--VEPYHFIMQEDCN-----LVLYD----HSTSVWASNTGILGKK-GCKAVLQSDGNFVVYDAE   69 (109)
T ss_dssp             CEEETTCEEETTCEEE--ETTEEEEECTTSC-----EEEEE----TTEEEEECCCCCTTCC-CCEEEECTTSCEEEECSS
T ss_pred             CCccCCCEEeCCCEEE--eCCEEEEecCCCe-----EEEEe----CCEEEEEeCCCCCCce-eEEEEEcCCceEEEEeCC
Confidence            6899999999999996  4889999987765     44443    4588999999999864 4679999999 9999999


Q ss_pred             CcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccC
Q 008046           98 DRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDH  140 (579)
Q Consensus        98 ~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~  140 (579)
                      |.++|++++..+.....|.|+|+|||||++.    .+|||+.|
T Consensus        70 g~~vW~s~t~~~~~~~~l~L~ddGNlvly~~----~~W~S~t~  108 (109)
T d1kj1a_          70 GRSLWASHSVRGNGNYVLVLQEDGNVVIYGS----DIWSTGTY  108 (109)
T ss_dssp             SCEEEECCCCCCSSCCEEEECTTSCEEEECC----EEEECCCC
T ss_pred             CcEEEEEeeECCCCCEEEEEeCCCcEEEECC----CEecCCCc
Confidence            9999999986555667899999999999963    59999876

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.80  E-value=1.6e-19  Score=150.48  Aligned_cols=106  Identities=22%  Similarity=0.338  Sum_probs=90.1

Q ss_pred             ccccCCCCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcC
Q 008046           18 NDNITPSQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDG   96 (579)
Q Consensus        18 ~~~i~~g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~   96 (579)
                      .|+|.+|+.|..|++|.  +|.|+|.|+..++     |.|+.    ..++||.||++.|..  .+.+.++.+| |+|.|+
T Consensus         1 ~~~L~~g~~L~~G~~l~--ng~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~~--~~~l~l~~~Gnlvl~~~   67 (108)
T d1jpca_           1 DNILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYD----VDKPIWATNTGGLSR--SCFLSMQTDGNLVVYNP   67 (108)
T ss_dssp             CCEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSCS--SCEEEECTTSCEEEECT
T ss_pred             CCCccCCCEecCCCEEE--cCCEEEEECCCCe-----EEEEe----CCceeeEeCCCCCCC--ccEEEEeccceEEEECC
Confidence            47899999999999995  6999999998886     56665    357899999998843  4679999999 999999


Q ss_pred             CCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccC
Q 008046           97 RDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDH  140 (579)
Q Consensus        97 ~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~  140 (579)
                      +|.++|++++........|+|+|+|||||++.    .+||||+|
T Consensus        68 ~g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~----~~W~S~t~  107 (108)
T d1jpca_          68 SNKPIWASNTGGQNGNYVCILQKDRNVVIYGT----DRWATGTH  107 (108)
T ss_dssp             TCCEEEECCCCCSCSCEEEEECTTSCEEEEEC----CCCCCCCC
T ss_pred             CccceEEccccCCCCcEEEEEcCCCCEEEeCC----CcccCCCC
Confidence            99999999986544556789999999999973    49999988

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.70  E-value=1.4e-17  Score=140.93  Aligned_cols=102  Identities=18%  Similarity=0.234  Sum_probs=85.8

Q ss_pred             EEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCcee
Q 008046           56 GIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLL  134 (579)
Q Consensus        56 giw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~l  134 (579)
                      -|||.++++++.+|++|++.|+....-+|.++.|| |+|.+. +.++|++++.+......|.|+|+|||||++. .++++
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~-~~~~l   88 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTN-QNIAV   88 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEET-TTEEE
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcC-CCCEE
Confidence            38999999999999999999998777789999999 999986 6789999987545567899999999999997 57899


Q ss_pred             eeeccCCCCccCCCCeecccccCCCceEEEeccCCCCCCCcceEEeecCCCCcEEE
Q 008046          135 WQSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLV  190 (579)
Q Consensus       135 WQSFd~PTDTlLpgq~l~~~~~tg~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~  190 (579)
                      |||+.                               +.++|.|.|.||+||++.+|
T Consensus        89 W~S~t-------------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          89 WTSGN-------------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             EECCC-------------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             EEeCC-------------------------------CCCCCcEEEEECCCCcEEEe
Confidence            99973                               23567899999999987664

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.58  E-value=7.6e-16  Score=128.68  Aligned_cols=109  Identities=20%  Similarity=0.246  Sum_probs=90.3

Q ss_pred             EEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceee
Q 008046           57 IWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLW  135 (579)
Q Consensus        57 iw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lW  135 (579)
                      |||.-.++.+..|+.+++.++....-+|.++.|| |||.++ +.++|++++.+ ..+..+.|+|+|||||++. .++++|
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~-~~~~~l~l~~dGNLvl~d~-~~~~vW   79 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAG-ATGCRAVLQSDGLLVILTA-QNTIRW   79 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCS-CSCCBCCBCSSSCBCCBCT-TTCCSC
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCC-CCceEEEEeccCCEEEEcc-CCCEEE
Confidence            6776566777789999999998877889999999 999885 67899999864 5678899999999999996 567999


Q ss_pred             eeccCCCCccCCCCeecccccCCCceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          136 QSFDHPCDTLLPGMKLGRNFKTGMDRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       136 QSFd~PTDTlLpgq~l~~~~~tg~~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                      ||+.                               +.+.|.|.|.|++||+..+|    ..++|.+|+
T Consensus        80 sS~t-------------------------------~~~~g~y~l~Lq~DGNlvlY----~~~~Wssgt  112 (115)
T d1dlpa1          80 SSGT-------------------------------KGSIGNYVLVLQPDRTVTIY----GPGLWDSGT  112 (115)
T ss_dssp             CCCC-------------------------------CCCSSCCEEEECSSSCEEEE----CSEEEECSC
T ss_pred             EcCC-------------------------------CCCCCCEEEEECCCCcEEEe----CCCeecCCC
Confidence            9863                               34678999999999986554    347898875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.9e-15  Score=146.92  Aligned_cols=100  Identities=23%  Similarity=0.484  Sum_probs=85.3

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...++||+|+||.||+|.+.+++.||||+++.. ....++|.+|+.++++++|||||+++|+|...++.++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            356677899999999999999988889999999754 3456789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCcccCccccc
Q 008046          553 NKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       553 ~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                      +|+|.+++.....   .++|..+.
T Consensus        84 ~g~L~~~l~~~~~---~~~~~~~~  104 (263)
T d1sm2a_          84 HGCLSDYLRTQRG---LFAAETLL  104 (263)
T ss_dssp             TCBHHHHHHTTTT---CCCHHHHH
T ss_pred             CCcHHHHhhcccc---CCCHHHHH
Confidence            9999999875432   35555443

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.6e-15  Score=144.47  Aligned_cols=91  Identities=29%  Similarity=0.534  Sum_probs=81.6

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...++||+|+||.||+|++++++.||||+++.. ....++|++|+.++.+++|||||+++|+|...++.++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            467777899999999999999988889999999864 3456789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC
Q 008046          553 NKSLDFFIFDID  564 (579)
Q Consensus       553 ~GsL~~~l~~~~  564 (579)
                      +|+|.+++....
T Consensus        83 ~g~l~~~~~~~~   94 (258)
T d1k2pa_          83 NGCLLNYLREMR   94 (258)
T ss_dssp             TEEHHHHHHSGG
T ss_pred             CCcHHHhhhccc
Confidence            999999986543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=2.6e-15  Score=148.84  Aligned_cols=112  Identities=29%  Similarity=0.448  Sum_probs=86.8

Q ss_pred             cCHHHHHHhccc---------ccccceecccCceeEEEEEecC-C---cEEEEEEecCC-CcccHHHHHHHHHHHhcCCC
Q 008046          463 FDFASIAKATDN---------FASYNKLGEGGFGPVYKGTLVE-G---QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQH  528 (579)
Q Consensus       463 ~~~~~l~~at~~---------f~~~~~lG~G~fG~V~kg~~~~-g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H  528 (579)
                      ++|+++..++.+         |...++||+|+||.||+|.+.. +   ..||||.+... .....++|.+|+.+|++++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            445555555544         4445789999999999999753 2   35899998754 33445789999999999999


Q ss_pred             CceeceeEEEEECCeEEEEEeccCCCCHHHHhcCCCCCCcccCcccccc
Q 008046          529 RNLVKLLGCCIQADESMLIYEYMPNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       529 ~nlv~l~g~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      ||||+++|+|...+..++||||+++|+|.+++.....   .++|..+..
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~---~l~~~~~~~  132 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG---QFTVIQLVG  132 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTT---CSCHHHHHH
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccC---CCCHHHHHH
Confidence            9999999999999999999999999999999875332   255555443

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=3.2e-15  Score=147.22  Aligned_cols=91  Identities=31%  Similarity=0.544  Sum_probs=80.8

Q ss_pred             cccccccceecccCceeEEEEEecC-CcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      .++|...++||+|+||.||+|.+.. ++.||||+++.. ....++|.+|+.+|++++|||||+++|++...+..+|||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            3567777899999999999999764 889999999754 34567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      +++|+|.++|...
T Consensus        95 ~~~g~l~~~l~~~  107 (287)
T d1opja_          95 MTYGNLLDYLREC  107 (287)
T ss_dssp             CTTCBHHHHHHHS
T ss_pred             ccCcchHHHhhhc
Confidence            9999999999753

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.51  E-value=9.3e-14  Score=116.62  Aligned_cols=100  Identities=17%  Similarity=0.273  Sum_probs=79.7

Q ss_pred             CccCCCCEE--EecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEE
Q 008046           25 QSIRDGETL--VSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIF  101 (579)
Q Consensus        25 ~~l~~~~~l--~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~  101 (579)
                      +.|.++|.|  .+..|.|.|.|...|+     |.+ |.   ..++||.||+..|..  ...|.+..+| |+|.|++|.++
T Consensus        15 ~~l~~~q~l~~~~~~~~y~l~mQ~DGN-----LVL-y~---~~~~vWssnt~~~~~--~~~l~l~~dGnLvL~d~~g~~v   83 (119)
T d1b2pa_          15 QILHATESLEILFGTHVYRFIMQTDCN-----LVL-YD---NNNPIWATNTGGLGN--GCRAVLQPDGVLVVITNENVTV   83 (119)
T ss_dssp             CEEETTCEEEEEETTEEEEEEECTTSC-----EEE-EE---TTEEEEECCCTTSCS--SCEEEECTTSCEEEECTTCCEE
T ss_pred             CEEeCCCeEEEecCCceEEEEECCCCc-----EEE-EE---CCeEEEEecCCCCCc--ceEEEEEeCCCEEEECCCCcEE
Confidence            455555544  6779999999998886     433 43   467899999987753  3689999999 99999999999


Q ss_pred             EeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeecc
Q 008046          102 WSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFD  139 (579)
Q Consensus       102 Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd  139 (579)
                      |++++.+......++|+|+|||||++    ..+|||-.
T Consensus        84 WsS~t~~~~~~~~l~Lq~DGNlvlYg----~~~W~S~T  117 (119)
T d1b2pa_          84 WQSPVAGKAGHYVLVLQPDRNVVIYG----DALWATQT  117 (119)
T ss_dssp             EECSCCCCSSCEEEEECTTSCEEEEE----SEEEECCC
T ss_pred             EECCCcCCCCceEEEEcCCCCEEEEC----CCEeccCC
Confidence            99998654555678999999999996    36999965

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1e-14  Score=142.37  Aligned_cols=101  Identities=31%  Similarity=0.449  Sum_probs=82.2

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...++||+|+||.||+|.+++++.||||+++.. ....++|.+|+.+|.+++|||||+++|++. .++.+|||||++
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~   90 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME   90 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCC
Confidence            467777899999999999999988889999999754 345678999999999999999999999875 456789999999


Q ss_pred             CCCHHHHhcCCCCCCcccCcccccc
Q 008046          553 NKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       553 ~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      +|+|.+++.....  .-++|..+++
T Consensus        91 ~g~L~~~~~~~~~--~~l~~~~~~~  113 (272)
T d1qpca_          91 NGSLVDFLKTPSG--IKLTINKLLD  113 (272)
T ss_dssp             TCBHHHHTTSHHH--HTCCHHHHHH
T ss_pred             CCcHHHHHhhcCC--CCCCHHHHHH
Confidence            9999998864322  2245554443

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3e-14  Score=139.94  Aligned_cols=90  Identities=30%  Similarity=0.537  Sum_probs=74.1

Q ss_pred             ccccccc-eecccCceeEEEEEec---CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYN-KLGEGGFGPVYKGTLV---EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~-~lG~G~fG~V~kg~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +++...+ +||+|+||.||+|.+.   ++..||||+++... ....++|.+|+.+|.+++|||||+++|+|. .+..+||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeEEEE
Confidence            3454445 5999999999999864   25579999997543 344678999999999999999999999985 4568999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.+++...
T Consensus        87 mE~~~~g~L~~~l~~~  102 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGK  102 (285)
T ss_dssp             EECCTTEEHHHHHTTC
T ss_pred             EEeCCCCcHHHHhhcc
Confidence            9999999999998654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.9e-14  Score=141.28  Aligned_cols=102  Identities=27%  Similarity=0.405  Sum_probs=84.9

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMP  552 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~  552 (579)
                      ++|...+.||+|+||.||+|...+++.||||+++.. ....+.|.+|+.+|.+++|+|||+++|+|. .++.++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence            467778899999999999999988888999999754 345678999999999999999999999985 456889999999


Q ss_pred             CCCHHHHhcCCCCCCcccCccccccc
Q 008046          553 NKSLDFFIFDIDWNGLMLTRSSKSHI  578 (579)
Q Consensus       553 ~GsL~~~l~~~~~~~~~l~~~~r~~i  578 (579)
                      +|+|..++......  .++|..+.+|
T Consensus        95 ~g~l~~~~~~~~~~--~l~~~~~~~i  118 (285)
T d1fmka3          95 KGSLLDFLKGETGK--YLRLPQLVDM  118 (285)
T ss_dssp             TCBHHHHHSHHHHT--TCCHHHHHHH
T ss_pred             CCchhhhhhhcccc--cchHHHHHHH
Confidence            99999998753322  4667666543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=5.9e-14  Score=137.98  Aligned_cols=90  Identities=26%  Similarity=0.462  Sum_probs=81.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...++||+|+||.||++... +++.||||+++.......+.|.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            45677789999999999999975 48899999998666666788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++.+
T Consensus        92 ~~g~L~~~~~~  102 (288)
T d2jfla1          92 AGGAVDAVMLE  102 (288)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHHh
Confidence            99999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.2e-14  Score=139.70  Aligned_cols=90  Identities=23%  Similarity=0.386  Sum_probs=76.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEE--CCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ--ADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~--~~~~~lV  547 (579)
                      ++|...+.||+|+||.||++... +|+.||||.++...  ....+.|.+|+.+|.+++|||||++++++..  ....+||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            56788889999999999999875 48899999997542  3345679999999999999999999999864  4568999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++|+|.+++..
T Consensus        84 mEy~~~g~L~~~i~~   98 (269)
T d2java1          84 MEYCEGGDLASVITK   98 (269)
T ss_dssp             EECCTTEEHHHHHHH
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999999864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.4e-13  Score=135.60  Aligned_cols=90  Identities=26%  Similarity=0.477  Sum_probs=80.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...++||+|+||.||++... +|+.||||+++.......+.+.+|+.++++++|||||++++++...+..+|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            46888889999999999999964 48999999997554455678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++.+
T Consensus       100 ~gg~L~~~~~~  110 (293)
T d1yhwa1         100 AGGSLTDVVTE  110 (293)
T ss_dssp             TTCBHHHHHHH
T ss_pred             CCCcHHHHhhc
Confidence            99999998864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.1e-14  Score=137.72  Aligned_cols=84  Identities=27%  Similarity=0.439  Sum_probs=69.8

Q ss_pred             ceecccCceeEEEEEecC---CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEeccCC
Q 008046          479 NKLGEGGFGPVYKGTLVE---GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYMPN  553 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~---g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~~~  553 (579)
                      ++||+|+||.||+|.+..   ++.||||+++..  .....++|.+|+.+|.+++|||||+++|+|. .+..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            479999999999998753   467999999743  2233568999999999999999999999985 4567899999999


Q ss_pred             CCHHHHhcCC
Q 008046          554 KSLDFFIFDI  563 (579)
Q Consensus       554 GsL~~~l~~~  563 (579)
                      |+|.+++...
T Consensus        92 g~L~~~l~~~  101 (277)
T d1xbba_          92 GPLNKYLQQN  101 (277)
T ss_dssp             EEHHHHHHHC
T ss_pred             CcHHHHHhhc
Confidence            9999999753

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=7.2e-14  Score=136.05  Aligned_cols=90  Identities=26%  Similarity=0.315  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||++... +++.||||+++... .+..+.|.+|+.+|++++|||||++++++...+..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            46778889999999999999975 48999999997542 23346799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.++|..
T Consensus        85 ~~gg~L~~~l~~   96 (271)
T d1nvra_          85 CSGGELFDRIEP   96 (271)
T ss_dssp             CTTEEGGGGSBT
T ss_pred             cCCCcHHHHHhc
Confidence            999999999964

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.43  E-value=1.6e-13  Score=138.63  Aligned_cols=91  Identities=27%  Similarity=0.392  Sum_probs=81.8

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||++... +|+.||||++........+.+.+|+.+|.+++|||||++++++...+..+|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            46888889999999999999975 58999999998665555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC
Q 008046          552 PNKSLDFFIFDI  563 (579)
Q Consensus       552 ~~GsL~~~l~~~  563 (579)
                      ++|+|.++|.+.
T Consensus       106 ~gg~L~~~l~~~  117 (350)
T d1koaa2         106 SGGELFEKVADE  117 (350)
T ss_dssp             CSCBHHHHHTCT
T ss_pred             CCCCHHHHHHhh
Confidence            999999999653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.8e-13  Score=134.99  Aligned_cols=90  Identities=27%  Similarity=0.400  Sum_probs=79.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC------cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS------GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      +.|...++||+|+||.||++... +|+.||||+++...      ....+.|.+|+.+|.+++|||||++++++...+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            46778889999999999999974 58999999986431      123578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      |||||+++|+|.++|..
T Consensus        90 iv~E~~~gg~L~~~i~~  106 (293)
T d1jksa_          90 LILELVAGGELFDFLAE  106 (293)
T ss_dssp             EEEECCCSCBHHHHHHH
T ss_pred             EEEEcCCCccccchhcc
Confidence            99999999999999964

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.1e-13  Score=137.62  Aligned_cols=91  Identities=30%  Similarity=0.554  Sum_probs=75.8

Q ss_pred             ccccccceecccCceeEEEEEecC-Cc--EEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQ--EIAVKRLSKG-SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...++||+|+||.||+|.+.+ +.  .||||+++.. ..+..++|.+|+.+|.++ +|||||+++|+|...+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            456667899999999999999754 43  5889988644 334456899999999998 799999999999999999999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+++|+|.++|+..
T Consensus        90 ~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             ECCCTTCBHHHHHHTT
T ss_pred             EEecCCCcHHHHHhhc
Confidence            9999999999999754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.3e-14  Score=140.76  Aligned_cols=91  Identities=22%  Similarity=0.263  Sum_probs=80.9

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      .++|...++||+|+||.||++... +|+.||+|+++... ....+.+.+|+.+|++++|||||++++++...++.+||||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            467888899999999999999975 58899999997542 3345689999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+++|+|.++|..
T Consensus        85 y~~gg~L~~~l~~   97 (322)
T d1s9ja_          85 HMDGGSLDQVLKK   97 (322)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             cCCCCcHHHHHhh
Confidence            9999999999964

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=8.4e-14  Score=136.06  Aligned_cols=98  Identities=24%  Similarity=0.418  Sum_probs=79.2

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||+|++.  ..||||+++..  ..+..+.|.+|+.+|.+++|||||+++|++.. +..+|||||
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey   84 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQW   84 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEec
Confidence            45777789999999999999864  46999999744  34456789999999999999999999999854 567899999


Q ss_pred             cCCCCHHHHhcCCCCCCcccCccccc
Q 008046          551 MPNKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       551 ~~~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                      +++|+|.++|...+.   .+++..+.
T Consensus        85 ~~~g~L~~~l~~~~~---~~~~~~~~  107 (276)
T d1uwha_          85 CEGSSLYHHLHIIET---KFEMIKLI  107 (276)
T ss_dssp             CCEEEHHHHHHTSCC---CCCHHHHH
T ss_pred             CCCCCHHHHHhhccC---CCCHHHHH
Confidence            999999999975432   24454443

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.7e-14  Score=138.47  Aligned_cols=99  Identities=26%  Similarity=0.455  Sum_probs=78.5

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-CeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-DESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-~~~~lV~Ey~  551 (579)
                      ++|...+.||+|+||.||+|.+ .|..||||+++..  ...++|.+|+.++++++|||||+++|+|.+. +..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            3456668999999999999998 5789999999753  3457899999999999999999999999754 5679999999


Q ss_pred             CCCCHHHHhcCCCCCCcccCccccc
Q 008046          552 PNKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       552 ~~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                      ++|+|.++|+...  ...++|..+.
T Consensus        84 ~~g~L~~~l~~~~--~~~l~~~~~~  106 (262)
T d1byga_          84 AKGSLVDYLRSRG--RSVLGGDCLL  106 (262)
T ss_dssp             TTEEHHHHHHHHH--HHHCCHHHHH
T ss_pred             CCCCHHHHHHhcC--CCCCCHHHHH
Confidence            9999999997422  1234555443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.3e-13  Score=131.84  Aligned_cols=90  Identities=28%  Similarity=0.394  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++.+++|||||++++++...+..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            46777889999999999999975 4889999998632   2234568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.++|..
T Consensus        86 Ey~~~g~L~~~l~~   99 (263)
T d2j4za1          86 EYAPLGTVYRELQK   99 (263)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             eecCCCcHHHHHhh
Confidence            99999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=1.2e-13  Score=136.84  Aligned_cols=98  Identities=30%  Similarity=0.521  Sum_probs=84.1

Q ss_pred             HHHHHhcccccccceecccCceeEEEEEec------CCcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          466 ASIAKATDNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       466 ~~l~~at~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      .+++...++|...++||+|+||.||+|+..      +++.||||+++.... +..++|.+|+.++++++|||+++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            344556778999999999999999999864      356899999975433 3456899999999999999999999999


Q ss_pred             EECCeEEEEEeccCCCCHHHHhcCC
Q 008046          539 IQADESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       539 ~~~~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ...+..++|+||+++|+|.++|...
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~  110 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSM  110 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhc
Confidence            9999999999999999999999743

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.39  E-value=4e-13  Score=135.77  Aligned_cols=90  Identities=24%  Similarity=0.334  Sum_probs=80.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      +.|...++||+|+||.||++... +|+.||||+++.......+.+.+|+.+|.+++|||||++++++...+..+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            46888889999999999999964 58999999998655555668899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.+++..
T Consensus       109 ~gg~L~~~~~~  119 (352)
T d1koba_         109 SGGELFDRIAA  119 (352)
T ss_dssp             CCCBHHHHTTC
T ss_pred             CCChHHHHHHh
Confidence            99999988764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.39  E-value=2.5e-13  Score=134.74  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=74.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      +.|...+.||+|+||.||++... +++.||||.+.... ....+.+.+|+.+|.+++|||||++++++...+..+|||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            45777789999999999999975 48899999997542 23345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      +++|+|.++|..
T Consensus        89 ~~gg~L~~~l~~  100 (307)
T d1a06a_          89 VSGGELFDRIVE  100 (307)
T ss_dssp             CCSCBHHHHHHT
T ss_pred             cCCCcHHHhhhc
Confidence            999999999964

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.8e-13  Score=134.26  Aligned_cols=101  Identities=29%  Similarity=0.474  Sum_probs=81.6

Q ss_pred             ccccccceecccCceeEEEEEecCC-----cEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEG-----QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~l  546 (579)
                      +.|...+.||+|+||.||+|.+...     ..||||+++.. ......+|.+|+.++.+++|||||+++|++...+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            3566778999999999999997542     36999999754 33345689999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCCCCcccCccccc
Q 008046          547 IYEYMPNKSLDFFIFDIDWNGLMLTRSSKS  576 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~  576 (579)
                      |+||+.+|+|.+++.....   .++|..+.
T Consensus        87 v~e~~~~~~l~~~~~~~~~---~~~~~~~~  113 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDG---EFSVLQLV  113 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTT---CSCHHHHH
T ss_pred             EEEecccCcchhhhhcccc---cccHHHHH
Confidence            9999999999998865432   24454443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=6.1e-13  Score=132.76  Aligned_cols=89  Identities=19%  Similarity=0.294  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      ++|...++||+|+||.||++... +++.||||.++... .....+.+|+.+|.+++|||||++++++...+..+|||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            46777889999999999999975 48899999997543 33457889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC
Q 008046          552 PNKSLDFFIFD  562 (579)
Q Consensus       552 ~~GsL~~~l~~  562 (579)
                      ++|+|.++|..
T Consensus        84 ~gg~L~~~i~~   94 (321)
T d1tkia_          84 SGLDIFERINT   94 (321)
T ss_dssp             CCCBHHHHHTS
T ss_pred             CCCcHHHHHHh
Confidence            99999999965

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.4e-13  Score=133.19  Aligned_cols=86  Identities=30%  Similarity=0.560  Sum_probs=73.1

Q ss_pred             ceecccCceeEEEEEecCC----cEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC-CeEEEEEeccC
Q 008046          479 NKLGEGGFGPVYKGTLVEG----QEIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-DESMLIYEYMP  552 (579)
Q Consensus       479 ~~lG~G~fG~V~kg~~~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-~~~~lV~Ey~~  552 (579)
                      ++||+|+||+||+|.+.+.    ..||||+++.. .....++|.+|+++|++++|||||+++|+|... ...++||||++
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~  112 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  112 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence            5899999999999997542    35899999754 344567899999999999999999999999875 57899999999


Q ss_pred             CCCHHHHhcCCC
Q 008046          553 NKSLDFFIFDID  564 (579)
Q Consensus       553 ~GsL~~~l~~~~  564 (579)
                      +|+|.+++....
T Consensus       113 ~g~l~~~~~~~~  124 (311)
T d1r0pa_         113 HGDLRNFIRNET  124 (311)
T ss_dssp             TCBHHHHHHCTT
T ss_pred             cCchhhhhcccc
Confidence            999999987543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=7.4e-13  Score=128.73  Aligned_cols=87  Identities=26%  Similarity=0.384  Sum_probs=73.1

Q ss_pred             cccceecccCceeEEEEEecC-CcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE----CCeEEEEE
Q 008046          476 ASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ----ADESMLIY  548 (579)
Q Consensus       476 ~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~----~~~~~lV~  548 (579)
                      ...++||+|+||.||++.... +..||+|.+...  .....+.|.+|+++|++++|||||++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            344589999999999999754 789999998743  23345689999999999999999999999865    34579999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.++|..
T Consensus        92 E~~~~g~L~~~l~~  105 (270)
T d1t4ha_          92 ELMTSGTLKTYLKR  105 (270)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             eCCCCCcHHHHHhc
Confidence            99999999999964

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4e-13  Score=131.88  Aligned_cols=90  Identities=26%  Similarity=0.305  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||||+++..   .....+.+.+|+.+|++++|||||++++++...+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            46778889999999999999975 5889999998642   2234578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        88 Ey~~gg~L~~~~~~  101 (288)
T d1uu3a_          88 SYAKNGELLKYIRK  101 (288)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             EccCCCCHHHhhhc
Confidence            99999999998864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=4e-13  Score=133.31  Aligned_cols=90  Identities=24%  Similarity=0.522  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG---QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      +.|...++||+|+||.||++... +++.||||+++....   ...+.|.+|+.+|.+++|||||++++++...+..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            34788889999999999999864 588999999975432   23457999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|..++..
T Consensus        95 E~~~~g~l~~~~~~  108 (309)
T d1u5ra_          95 EYCLGSASDLLEVH  108 (309)
T ss_dssp             ECCSEEHHHHHHHH
T ss_pred             EecCCCchHHHHHh
Confidence            99999999877643

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.2e-13  Score=133.19  Aligned_cols=90  Identities=26%  Similarity=0.492  Sum_probs=77.9

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...++||+|+||.||+|.+.      .+..||||+++... .+....|.+|+.++.+++|||||+++|+|...++.+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            56777789999999999999863      25789999997543 334457999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +||||+++|+|.+++..
T Consensus       100 lv~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRS  116 (308)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEeecCCCCHHHHHHh
Confidence            99999999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.33  E-value=1.4e-12  Score=127.17  Aligned_cols=90  Identities=21%  Similarity=0.286  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc---------ccHHHHHHHHHHHhcCC-CCceeceeEEEEEC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG---------QGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQA  541 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~  541 (579)
                      ++|...+.||+|+||+||+++.. +++.+|||+++....         ...+.+.+|+.+|.+++ |||||++++++..+
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            46777889999999999999974 588999999975421         11246889999999997 99999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHhcC
Q 008046          542 DESMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~  562 (579)
                      +..+|||||+++|+|.++|..
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~  103 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTE  103 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH
T ss_pred             cceEEEEEcCCCchHHHHHHh
Confidence            999999999999999999964

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.9e-13  Score=132.96  Aligned_cols=91  Identities=29%  Similarity=0.425  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEec------CCcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEECCeE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV------EGQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~~  544 (579)
                      +++...++||+|+||.||+|++.      .++.||||+++... .....+|.+|+.++.++ +|||||+++|+|...+..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            56677789999999999999852      35689999997543 33456899999999999 799999999999999999


Q ss_pred             EEEEeccCCCCHHHHhcCC
Q 008046          545 MLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~~  563 (579)
                      +|||||+++|+|.++|+..
T Consensus       103 ~lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEcCCCCCHHHHHHhc
Confidence            9999999999999999754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.3e-12  Score=130.71  Aligned_cols=92  Identities=29%  Similarity=0.471  Sum_probs=76.6

Q ss_pred             cccccccceecccCceeEEEEEecC------CcEEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCceeceeEEEEECCe
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKG-SGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQADE  543 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~~  543 (579)
                      .++|...++||+|+||.||+|....      ...||||.+... .......|.+|+.+|.++ +|||||++++++...+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3567788899999999999998643      236999998654 334456899999999998 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcCC
Q 008046          544 SMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      .+|||||+++|+|.++|...
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTT
T ss_pred             EEEEEEcCCCCcHHHHHHhc
Confidence            99999999999999999754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=9.8e-13  Score=130.16  Aligned_cols=96  Identities=22%  Similarity=0.362  Sum_probs=74.3

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHH--HHhcCCCCceeceeEEEEECC----eEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVT--LIARLQHRNLVKLLGCCIQAD----ESML  546 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~--~l~~l~H~nlv~l~g~~~~~~----~~~l  546 (579)
                      +.+...++||+|+||.||+|++ +|+.||||+++..   ..+++..|.+  .+.+++|||||+++|+|...+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3456668999999999999997 6789999999642   2344555544  456789999999999998754    5799


Q ss_pred             EEeccCCCCHHHHhcCCCCCCcccCcccccc
Q 008046          547 IYEYMPNKSLDFFIFDIDWNGLMLTRSSKSH  577 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~~~~~~~~~l~~~~r~~  577 (579)
                      |||||++|+|.++|....     ++|..+.+
T Consensus        79 v~Ey~~~g~L~~~l~~~~-----l~~~~~~~  104 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYT-----VTVEGMIK  104 (303)
T ss_dssp             EEECCTTCBHHHHHHHCC-----BCHHHHHH
T ss_pred             EEecccCCCHHHHHhcCC-----CCHHHHHH
Confidence            999999999999997532     55655544

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=1.4e-12  Score=129.64  Aligned_cols=91  Identities=22%  Similarity=0.340  Sum_probs=79.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||+++.. +|+.||||+++..   .....+.+.+|+.++++++|||||++++++...+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            46778889999999999999975 4899999999643   2234678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCC
Q 008046          549 EYMPNKSLDFFIFDI  563 (579)
Q Consensus       549 Ey~~~GsL~~~l~~~  563 (579)
                      ||+++|+|..++...
T Consensus        84 E~~~gg~l~~~~~~~   98 (316)
T d1fota_          84 DYIEGGELFSLLRKS   98 (316)
T ss_dssp             CCCCSCBHHHHHHHT
T ss_pred             eecCCcccccccccc
Confidence            999999999888643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.9e-12  Score=129.80  Aligned_cols=90  Identities=23%  Similarity=0.280  Sum_probs=79.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...+.||+|+||.||++... +++.||||+++..   .....+.+.+|+.+|++++|||||++++++...+..++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            56888899999999999999974 5899999999743   2334678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+++|+|.+++..
T Consensus        85 ey~~gg~L~~~~~~   98 (337)
T d1o6la_          85 EYANGGELFFHLSR   98 (337)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             eccCCCchhhhhhc
Confidence            99999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.3e-12  Score=127.22  Aligned_cols=90  Identities=23%  Similarity=0.355  Sum_probs=75.5

Q ss_pred             ccccccceecccCceeEEEEEecC----CcEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE----GQEIAVKRLSKGSG-QGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...+.||+|+||.||+|.+..    +..||||.++.... ...+.|.+|+.+|++++|||||+++|++. .+..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence            567777899999999999998743    35699999875433 34568999999999999999999999985 5678999


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      |||+++|+|.+++...
T Consensus        86 ~E~~~~g~l~~~~~~~  101 (273)
T d1mp8a_          86 MELCTLGELRSFLQVR  101 (273)
T ss_dssp             EECCTTEEHHHHHHHT
T ss_pred             EEeccCCcHHhhhhcc
Confidence            9999999999988643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.8e-12  Score=127.70  Aligned_cols=90  Identities=22%  Similarity=0.374  Sum_probs=77.0

Q ss_pred             ccccccceecccCceeEEEEEecC-CcEEEEEEecCC---CcccHHHHHHHHHHHh-cCCCCceeceeEEEEECCeEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE-GQEIAVKRLSKG---SGQGMEEFKNEVTLIA-RLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~~l~-~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      ++|...++||+|+||.||++.... ++.||||+++..   .....+.+..|+.++. .++|||||++++++..++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            467778899999999999999754 889999999643   2234567788888765 68999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC
Q 008046          548 YEYMPNKSLDFFIFD  562 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~  562 (579)
                      |||+++|+|.++|..
T Consensus        82 mEy~~~g~L~~~i~~   96 (320)
T d1xjda_          82 MEYLNGGDLMYHIQS   96 (320)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EeecCCCcHHHHhhc
Confidence            999999999999964

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=9.4e-13  Score=128.25  Aligned_cols=89  Identities=31%  Similarity=0.493  Sum_probs=67.3

Q ss_pred             ccccccceecccCceeEEEEEecC--C--cEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE--G--QEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~--g--~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...+.||+|+||.||+|.+..  +  ..||||+++..   ..+..++|.+|+.+|.+++|||||+++|++.. +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            457777899999999999998643  2  36899998754   23345689999999999999999999999965 4678


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +|+||+++|+|.+++..
T Consensus        87 lv~e~~~~~~l~~~~~~  103 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRK  103 (273)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             eeeeeecCcchhhhhhc
Confidence            99999999999998864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=3.2e-12  Score=127.25  Aligned_cols=89  Identities=30%  Similarity=0.568  Sum_probs=72.7

Q ss_pred             cccccceecccCceeEEEEEecC-Cc----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLVE-GQ----EIAVKRLSKG-SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLI  547 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~~-g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV  547 (579)
                      +|...++||+|+||.||+|.+.. |+    .||+|+++.. ..+..++|.+|+.++++++|||||+++|+|.++ ..+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEE
Confidence            47778899999999999998643 33    5899998754 345577999999999999999999999999764 56788


Q ss_pred             EeccCCCCHHHHhcCC
Q 008046          548 YEYMPNKSLDFFIFDI  563 (579)
Q Consensus       548 ~Ey~~~GsL~~~l~~~  563 (579)
                      +||+.+|+|.+++...
T Consensus        89 ~e~~~~~~l~~~~~~~  104 (317)
T d1xkka_          89 TQLMPFGCLLDYVREH  104 (317)
T ss_dssp             EECCTTCBHHHHHHHT
T ss_pred             EEeccCCccccccccc
Confidence            8999999999988754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.26  E-value=4.2e-12  Score=123.88  Aligned_cols=90  Identities=21%  Similarity=0.246  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCceeceeEEEEECC----eE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS---GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD----ES  544 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~----~~  544 (579)
                      ++|...+.||+|+||.||++... +++.||||.++...   ....+.|.+|+.++.+++|||||++++++...+    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            56778889999999999999964 58999999997542   233457999999999999999999999987643    37


Q ss_pred             EEEEeccCCCCHHHHhcC
Q 008046          545 MLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       545 ~lV~Ey~~~GsL~~~l~~  562 (579)
                      +|||||+++|+|.+++..
T Consensus        87 ~lvmE~~~g~~L~~~~~~  104 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHT  104 (277)
T ss_dssp             EEEEECCCEEEHHHHHHH
T ss_pred             EEEEECCCCCEehhhhcc
Confidence            899999999999998864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=5e-12  Score=124.70  Aligned_cols=88  Identities=30%  Similarity=0.526  Sum_probs=73.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...++||+|+||.||++... +++.||||+++...  ....+.+.+|+.+|++++|||||++++++..+...++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57888899999999999999974 58999999996432  2345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhc
Q 008046          550 YMPNKSLDFFIF  561 (579)
Q Consensus       550 y~~~GsL~~~l~  561 (579)
                      |+.+ ++.+++.
T Consensus        82 ~~~~-~~~~~~~   92 (298)
T d1gz8a_          82 FLHQ-DLKKFMD   92 (298)
T ss_dssp             CCSE-EHHHHHH
T ss_pred             ecCC-chhhhhh
Confidence            9965 4555553

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.5e-12  Score=126.90  Aligned_cols=92  Identities=26%  Similarity=0.487  Sum_probs=73.1

Q ss_pred             ccccccceecccCceeEEEEEecC--------CcEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCceeceeEEEEECC
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVE--------GQEIAVKRLSKGSG-QGMEEFKNEVTLIARL-QHRNLVKLLGCCIQAD  542 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~--------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~~  542 (579)
                      +.|...++||+|+||.||+++...        +..||||+++.... ....++.+|+..+.++ +|||||+++++|.+..
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            466777899999999999998532        24799999976533 4457899999999888 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHhcCCC
Q 008046          543 ESMLIYEYMPNKSLDFFIFDID  564 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~~~~  564 (579)
                      ..++||||+++|+|.++|....
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~  114 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARR  114 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTS
T ss_pred             eEEEEEEccCCCcHHHHHHhhc
Confidence            9999999999999999997543

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.23  E-value=9.9e-12  Score=103.26  Aligned_cols=98  Identities=22%  Similarity=0.354  Sum_probs=76.0

Q ss_pred             CCccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEEE
Q 008046           24 SQSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFW  102 (579)
Q Consensus        24 g~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~W  102 (579)
                      .|.|.+++.|  .+|.|.|.|...|+     |.++.    ..++||.+|...+   ....+.+.++| |||.|.++.++|
T Consensus        14 ~~tl~~~~~l--~~g~~~l~~q~DGN-----LvL~~----~~~~vW~s~t~~~---~~~~l~l~~dGNLvl~d~~~~~vW   79 (115)
T d1dlpa1          14 PQTLHAAQSL--ELSSFRFTMQSDCN-----LVLFD----SDVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRW   79 (115)
T ss_dssp             CSCCCTTCEE--CSTTEEEEECTTSC-----EEEEE----SSSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCSC
T ss_pred             cceecCCCcE--EcCCEEEEECCCCe-----EEEEc----CCeeEEEcccCCC---CceEEEEeccCCEEEEccCCCEEE
Confidence            3555556666  56889999988876     55543    3568999997543   34679999999 999999999999


Q ss_pred             eecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeecc
Q 008046          103 SSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFD  139 (579)
Q Consensus       103 st~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd  139 (579)
                      ++++........++|+++|||||++    ..+|+|-.
T Consensus        80 sS~t~~~~g~y~l~Lq~DGNlvlY~----~~~Wssgt  112 (115)
T d1dlpa1          80 SSGTKGSIGNYVLVLQPDRTVTIYG----PGLWDSGT  112 (115)
T ss_dssp             CCCCCCCSSCCEEEECSSSCEEEEC----SEEEECSC
T ss_pred             EcCCCCCCCCEEEEECCCCcEEEeC----CCeecCCC
Confidence            9998654556679999999999995    36999854

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.22  E-value=7.7e-12  Score=122.54  Aligned_cols=89  Identities=22%  Similarity=0.401  Sum_probs=77.5

Q ss_pred             ccccccceecccCceeEEEEEecCCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||+||++..++++.||||+++...  ....+.|.+|+.+|.+++|||||++++.+...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4677788999999999999999889999999997542  23357899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhc
Q 008046          551 MPNKSLDFFIF  561 (579)
Q Consensus       551 ~~~GsL~~~l~  561 (579)
                      +.++.+..+..
T Consensus        82 ~~~~~~~~~~~   92 (286)
T d1ob3a_          82 LDQDLKKLLDV   92 (286)
T ss_dssp             CSEEHHHHHHT
T ss_pred             ehhhhHHHHHh
Confidence            98776666654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.20  E-value=1.2e-11  Score=125.38  Aligned_cols=90  Identities=26%  Similarity=0.358  Sum_probs=74.3

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHH---HHHHhcCCCCceeceeEEEEECCeEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNE---VTLIARLQHRNLVKLLGCCIQADESM  545 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E---~~~l~~l~H~nlv~l~g~~~~~~~~~  545 (579)
                      ++|...++||+|+||.||++... +|+.||||++...   .......+.+|   +.+++.++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            56888899999999999999975 4899999998632   11223344444   66777888999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      |||||+++|+|.++|..
T Consensus        84 ivmE~~~gg~L~~~l~~  100 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQ  100 (364)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHh
Confidence            99999999999999964

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=1.4e-11  Score=124.06  Aligned_cols=90  Identities=24%  Similarity=0.294  Sum_probs=79.2

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG---SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~  548 (579)
                      ++|...++||+|+||.||++... +|+.||||+++..   .....+.+.+|+.+|..++|||||++++++......++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            46888899999999999999975 5899999998632   2234568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcC
Q 008046          549 EYMPNKSLDFFIFD  562 (579)
Q Consensus       549 Ey~~~GsL~~~l~~  562 (579)
                      ||+.+|+|.+++..
T Consensus       121 e~~~~g~l~~~l~~  134 (350)
T d1rdqe_         121 EYVAGGEMFSHLRR  134 (350)
T ss_dssp             ECCTTCBHHHHHHH
T ss_pred             ccccccchhhhHhh
Confidence            99999999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.7e-11  Score=120.88  Aligned_cols=84  Identities=25%  Similarity=0.368  Sum_probs=68.3

Q ss_pred             cceecccCceeEEEEEec-CCcEEEEEEecCCCcc-----cHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEecc
Q 008046          478 YNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQ-----GMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYEYM  551 (579)
Q Consensus       478 ~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~Ey~  551 (579)
                      .++||+|+||.||++... .|+.||||+++.....     ..+.+.+|+.++.+++|||||++++++...+..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            368999999999999975 4899999999643221     1346899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhc
Q 008046          552 PNKSLDFFIF  561 (579)
Q Consensus       552 ~~GsL~~~l~  561 (579)
                      +++++..++.
T Consensus        83 ~~~~~~~~~~   92 (299)
T d1ua2a_          83 ETDLEVIIKD   92 (299)
T ss_dssp             SEEHHHHHTT
T ss_pred             cchHHhhhhh
Confidence            8877665553

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=3.7e-11  Score=120.26  Aligned_cols=85  Identities=22%  Similarity=0.221  Sum_probs=70.3

Q ss_pred             ccccccc-eecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCceeceeEEEEE----CCeEE
Q 008046          473 DNFASYN-KLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQ----ADESM  545 (579)
Q Consensus       473 ~~f~~~~-~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~----~~~~~  545 (579)
                      ++|.... .||+|+||.||++... +++.||||+++..     +.+.+|+.++.++ +|||||++++++..    ....+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            4666544 5999999999999964 5899999998642     4678899887654 89999999998764    35689


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      ||||||++|+|.++|..
T Consensus        86 ivmEy~~gg~L~~~i~~  102 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQD  102 (335)
T ss_dssp             EEEECCCSEEHHHHHHS
T ss_pred             EEEECCCCCcHHHHHHh
Confidence            99999999999999975

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=4.6e-11  Score=117.04  Aligned_cols=90  Identities=22%  Similarity=0.396  Sum_probs=78.5

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEECCeEEEEEe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQADESMLIYE  549 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~~~~lV~E  549 (579)
                      ++|...++||+|+||.||+++.. +++.||||+++...  ....+.+.+|+.+++.++||||+++++++......++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            46778889999999999999964 58899999996442  2345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcC
Q 008046          550 YMPNKSLDFFIFD  562 (579)
Q Consensus       550 y~~~GsL~~~l~~  562 (579)
                      |+.+++|..++..
T Consensus        82 ~~~~~~l~~~~~~   94 (292)
T d1unla_          82 FCDQDLKKYFDSC   94 (292)
T ss_dssp             CCSEEHHHHHHHT
T ss_pred             ecccccccccccc
Confidence            9999998887754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.8e-11  Score=120.59  Aligned_cols=93  Identities=26%  Similarity=0.461  Sum_probs=73.8

Q ss_pred             hcccccccceecccCceeEEEEEecC------CcEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCceeceeEEEEEC-
Q 008046          471 ATDNFASYNKLGEGGFGPVYKGTLVE------GQEIAVKRLSKGS-GQGMEEFKNEVTLIARL-QHRNLVKLLGCCIQA-  541 (579)
Q Consensus       471 at~~f~~~~~lG~G~fG~V~kg~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nlv~l~g~~~~~-  541 (579)
                      ..++|...++||+|+||.||+|....      ++.||||+++... ....+.+.+|+.++.++ +|+|||++.+++... 
T Consensus        11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            34578888999999999999998532      4689999997543 34456888999888877 789999999998764 


Q ss_pred             CeEEEEEeccCCCCHHHHhcCC
Q 008046          542 DESMLIYEYMPNKSLDFFIFDI  563 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l~~~  563 (579)
                      ...++||||+++|+|.++|...
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHT
T ss_pred             CeEEEEEEecCCCcHHHHHHhc
Confidence            4689999999999999999753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.04  E-value=1.6e-10  Score=115.25  Aligned_cols=85  Identities=20%  Similarity=0.414  Sum_probs=73.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEEC--CeEEEEE
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQA--DESMLIY  548 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~--~~~~lV~  548 (579)
                      ++|...++||+|+||+||+++.. .++.||||+++..   ..+.+.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            57888899999999999999974 5889999999743   3568899999999995 99999999998753  4689999


Q ss_pred             eccCCCCHHHHh
Q 008046          549 EYMPNKSLDFFI  560 (579)
Q Consensus       549 Ey~~~GsL~~~l  560 (579)
                      ||+++|+|..+.
T Consensus       112 e~~~~~~L~~~~  123 (328)
T d3bqca1         112 EHVNNTDFKQLY  123 (328)
T ss_dssp             ECCCSCBGGGTT
T ss_pred             eecCCCcHHHHh
Confidence            999999987764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=7.9e-11  Score=117.16  Aligned_cols=90  Identities=23%  Similarity=0.352  Sum_probs=76.8

Q ss_pred             ccccccceecccCceeEEEEEec----CCcEEEEEEecCCC----cccHHHHHHHHHHHhcCCC-CceeceeEEEEECCe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV----EGQEIAVKRLSKGS----GQGMEEFKNEVTLIARLQH-RNLVKLLGCCIQADE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~----~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H-~nlv~l~g~~~~~~~  543 (579)
                      ++|...++||+|+||.||++...    .|+.||||.++...    ....+.+.+|+.++.+++| |||+++++++.....
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            56888899999999999999852    37899999986431    2234678999999999965 899999999999999


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+.+|+|.+++..
T Consensus       104 ~~~v~e~~~~~~L~~~i~~  122 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQ  122 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHH
T ss_pred             eeeeeecccccHHHHHHHh
Confidence            9999999999999999864

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.02  E-value=8.8e-10  Score=91.88  Aligned_cols=84  Identities=19%  Similarity=0.245  Sum_probs=65.6

Q ss_pred             eEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCce
Q 008046           83 LLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMDR  161 (579)
Q Consensus        83 ~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~~  161 (579)
                      +|.+..|| |||.++ +.++|++++.+......+.|.++|||||++. .+.++|+|..                      
T Consensus        33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~-~g~~vWsS~t----------------------   88 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITN-ENVTVWQSPV----------------------   88 (119)
T ss_dssp             EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-TCCEEEECSC----------------------
T ss_pred             EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECC-CCcEEEECCC----------------------
Confidence            58889999 999876 5689999986544567899999999999996 5678997632                      


Q ss_pred             EEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          162 HLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       162 ~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                               .-+.|.|.|.|++||+..++    ..+.|.+++
T Consensus        89 ---------~~~~~~~~l~Lq~DGNlvlY----g~~~W~S~T  117 (119)
T d1b2pa_          89 ---------AGKAGHYVLVLQPDRNVVIY----GDALWATQT  117 (119)
T ss_dssp             ---------CCCSSCEEEEECTTSCEEEE----ESEEEECCC
T ss_pred             ---------cCCCCceEEEEcCCCCEEEE----CCCEeccCC
Confidence                     12446789999999987665    246888764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.8e-10  Score=116.26  Aligned_cols=88  Identities=22%  Similarity=0.344  Sum_probs=70.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEE------CCe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQ------ADE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~------~~~  543 (579)
                      +.|...++||+|+||+||+|... +|+.||||+++..  .....+.+.+|+.++.+++|||||++++++..      ..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            56888889999999999999975 4899999999754  23345578999999999999999999999864      357


Q ss_pred             EEEEEeccCCCCHHHHhc
Q 008046          544 SMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~  561 (579)
                      .++||||+.++ |.+.+.
T Consensus        97 ~~iv~Ey~~~~-l~~~~~  113 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQ  113 (355)
T ss_dssp             EEEEEECCSEE-HHHHHT
T ss_pred             eEEEEeccchH-HHHhhh
Confidence            89999999655 444443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.7e-10  Score=115.84  Aligned_cols=91  Identities=15%  Similarity=0.265  Sum_probs=70.4

Q ss_pred             cccccccceecccCceeEEEEEe-cCCcEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCceeceeEEEEECC----eEE
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTL-VEGQEIAVKRLSKGS-GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD----ESM  545 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~----~~~  545 (579)
                      +++|...++||+|+||+||++.. .+|+.||||+++... ....+.+++|+.+|.+++|||++++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            34677888999999999999986 458999999997543 334568999999999999999999999986543    234


Q ss_pred             EEEeccCCCCHHHHhcC
Q 008046          546 LIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       546 lV~Ey~~~GsL~~~l~~  562 (579)
                      +++||+.+|+|.+++..
T Consensus        87 ~l~~~~~~g~L~~~l~~  103 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT  103 (345)
T ss_dssp             EEEEECCCEEHHHHHHH
T ss_pred             EEEEeecCCchhhhhhc
Confidence            45566779999999964

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.8e-10  Score=115.85  Aligned_cols=89  Identities=20%  Similarity=0.379  Sum_probs=67.7

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEECC------
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQAD------  542 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~~------  542 (579)
                      .+.|...++||+|+||.||++... +|+.||||+++..  .....+.+.+|+.+|++++|||+|++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            357888889999999999999964 4899999999753  2233568899999999999999999999987654      


Q ss_pred             eEEEEEeccCCCCHHHHhc
Q 008046          543 ESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       543 ~~~lV~Ey~~~GsL~~~l~  561 (579)
                      +.++||||+ +.+|..++.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~  114 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK  114 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH
T ss_pred             eEEEEEecc-cccHHHHHH
Confidence            469999999 567777764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.8e-10  Score=115.83  Aligned_cols=91  Identities=20%  Similarity=0.318  Sum_probs=74.3

Q ss_pred             cccccccceecccCceeEEEEEec-CCcEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCceeceeEEEEEC-----Ce
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGS--GQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA-----DE  543 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~-----~~  543 (579)
                      .++|...++||+|+||+||++... +|+.||||+++...  ....+.+.+|+.+|.+++|+|+|++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            456888889999999999999964 58999999997542  23446789999999999999999999988643     23


Q ss_pred             EEEEEeccCCCCHHHHhcC
Q 008046          544 SMLIYEYMPNKSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~GsL~~~l~~  562 (579)
                      .++|+||+.+|+|.+++..
T Consensus        97 ~~~i~~~~~gg~L~~~~~~  115 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC  115 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT
T ss_pred             eEEEEEeecCCchhhhccc
Confidence            4666778889999999954

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=3.7e-10  Score=111.97  Aligned_cols=88  Identities=22%  Similarity=0.437  Sum_probs=70.7

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCceeceeEEEEEC--------
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKG--SGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA--------  541 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~--------  541 (579)
                      ++|...++||+|+||+||++... +|+.||||++...  .....+.+.+|+.+|.+++|+|++++++.+...        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            67888899999999999999974 5899999998643  233457899999999999999999999988552        


Q ss_pred             CeEEEEEeccCCCCHHHHh
Q 008046          542 DESMLIYEYMPNKSLDFFI  560 (579)
Q Consensus       542 ~~~~lV~Ey~~~GsL~~~l  560 (579)
                      ...++|+||++++.+..+.
T Consensus        90 ~~~~iv~e~~~~~~~~~~~  108 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLS  108 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHT
T ss_pred             ceEEEEEeccCCCccchhh
Confidence            3578999999887766544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.9e-10  Score=115.77  Aligned_cols=81  Identities=23%  Similarity=0.466  Sum_probs=65.0

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceeceeEEEEEC------CeEEE
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLLGCCIQA------DESML  546 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~g~~~~~------~~~~l  546 (579)
                      .|...++||+|+||+||+++.. .++.||||++.....    .+.+|+.+|++++|+|||++++++...      .+.+|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            4666679999999999999975 489999999975432    234799999999999999999998653      24789


Q ss_pred             EEeccCCCCHHH
Q 008046          547 IYEYMPNKSLDF  558 (579)
Q Consensus       547 V~Ey~~~GsL~~  558 (579)
                      ||||++++.+..
T Consensus        97 v~Ey~~~~~~~~  108 (350)
T d1q5ka_          97 VLDYVPETVYRV  108 (350)
T ss_dssp             EEECCSEEHHHH
T ss_pred             EEeccCCccHHH
Confidence            999998664333

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.9e-10  Score=111.64  Aligned_cols=90  Identities=28%  Similarity=0.417  Sum_probs=73.6

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCc------ccHHHHHHHHHHHhcCC--CCceeceeEEEEECCe
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSG------QGMEEFKNEVTLIARLQ--HRNLVKLLGCCIQADE  543 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~--H~nlv~l~g~~~~~~~  543 (579)
                      +.|...++||+|+||.||++... +++.||||+++....      .....+.+|+.++++++  |||||++++++...+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            45777789999999999999964 589999999864311      11234779999999986  8999999999999999


Q ss_pred             EEEEEeccCC-CCHHHHhcC
Q 008046          544 SMLIYEYMPN-KSLDFFIFD  562 (579)
Q Consensus       544 ~~lV~Ey~~~-GsL~~~l~~  562 (579)
                      .++||||+.+ +++.+++..
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~  103 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITE  103 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHH
T ss_pred             EEEEEEeccCcchHHHHHhc
Confidence            9999999975 677777753

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=98.93  E-value=2.6e-09  Score=87.63  Aligned_cols=85  Identities=19%  Similarity=0.324  Sum_probs=64.3

Q ss_pred             ceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCc
Q 008046           82 GLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMD  160 (579)
Q Consensus        82 ~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~  160 (579)
                      -+|.+..|| |||.+. +.+||++++.+......+.|.++|||||++. .+.++|+|                       
T Consensus        21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~-~g~~vWsS-----------------------   75 (108)
T d1jpca_          21 FVFIMQEDCNLVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNP-SNKPIWAS-----------------------   75 (108)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-TCCEEEEC-----------------------
T ss_pred             EEEEECCCCeEEEEeC-CceeeEeCCCCCCCccEEEEeccceEEEECC-CccceEEc-----------------------
Confidence            468899999 999875 5789999986544566899999999999997 56789986                       


Q ss_pred             eEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCC
Q 008046          161 RHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGS  203 (579)
Q Consensus       161 ~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~  203 (579)
                              .+....+.|.+.|+++|++.++  .  .+.|.++.
T Consensus        76 --------~t~~~~~~~~l~L~ddGNlVly--~--~~~W~S~t  106 (108)
T d1jpca_          76 --------NTGGQNGNYVCILQKDRNVVIY--G--TDRWATGT  106 (108)
T ss_dssp             --------CCCCSCSCEEEEECTTSCEEEE--E--CCCCCCCC
T ss_pred             --------cccCCCCcEEEEEcCCCCEEEe--C--CCcccCCC
Confidence                    1122456788999999987665  2  34666653

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.92  E-value=2e-09  Score=89.98  Aligned_cols=96  Identities=19%  Similarity=0.335  Sum_probs=68.3

Q ss_pred             CccCCCCEEEecCCeEEEEeeCCCCCCceEEEEEEccCCCCeEEEEecCCCCCCCCcceEEEecCC-eEEEcCCCcEEEe
Q 008046           25 QSIRDGETLVSVNGTFELGFFSPGTSAKRYLGIWYKRVSPRTVAWVANRETPLTDQSGLLNVTSKG-IVLLDGRDRIFWS  103 (579)
Q Consensus        25 ~~l~~~~~l~S~~g~F~lgF~~~~~~~~~~lgiw~~~~~~~tvVW~Anr~~p~~~~~~~l~~~~~G-L~l~~~~~~~~Ws  103 (579)
                      +.|..++.|  ..|.|.|.|-..++     |.++-    ...+||.++-..  ......+.|.++| |+|+|.++.++|+
T Consensus        24 ~~l~~~q~l--~~g~y~L~~q~DGN-----LvL~~----~~~~vW~s~t~~--~~~~~~~~l~~~GnLvl~d~~~~~lW~   90 (120)
T d1dlpa2          24 QTLHATQSL--QLSPYRLSMETDCN-----LVLFD----RDDRVWSTNTAG--KGTGCRAVLQPNGRMDVLTNQNIAVWT   90 (120)
T ss_dssp             CEECSSCCC--BCSSCEEEEETTTE-----EEEEB----TTBCCSCCCCCS--SCSSCEEEEETTTEEEEEETTTEEEEE
T ss_pred             cEEcCCCee--EcCCEEEEEcCCCc-----EEEec----CCcEEEEEcccc--CCCcEEEEEeCCeeEEEEcCCCCEEEE
Confidence            344444444  34667777766553     44432    346789887433  2334679999999 9999999999999


Q ss_pred             ecCCCCCCCcEEEEecCCCEEEEcCCCCceeeee
Q 008046          104 SNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQS  137 (579)
Q Consensus       104 t~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQS  137 (579)
                      +++........+.|.++|||||++.    .+|.|
T Consensus        91 S~t~~~~~~~~l~Lq~DGnlvlY~~----~~W~t  120 (120)
T d1dlpa2          91 SGNSRSAGRYVFVLQPDRNLAIYGG----ALWTT  120 (120)
T ss_dssp             CCCCCSSSCCEEEECSSSCEEEECC----CCCBC
T ss_pred             eCCCCCCCcEEEEECCCCcEEEeCC----CcccC
Confidence            9986545566789999999999953    58875

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=98.89  E-value=6.4e-09  Score=85.28  Aligned_cols=86  Identities=24%  Similarity=0.371  Sum_probs=64.4

Q ss_pred             ceEEEecCC-eEEEcCCCcEEEeecCCCC-CCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCC
Q 008046           82 GLLNVTSKG-IVLLDGRDRIFWSSNTSIT-MKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGM  159 (579)
Q Consensus        82 ~~l~~~~~G-L~l~~~~~~~~Wst~~~~~-~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~  159 (579)
                      -.|.+..|| |+|.+ .+.+||++++... .....+.|.++|||||++. .++++|+|=                     
T Consensus        21 ~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~-~g~~vW~s~---------------------   77 (109)
T d1kj1a_          21 YHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDA-EGRSLWASH---------------------   77 (109)
T ss_dssp             EEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECS-SSCEEEECC---------------------
T ss_pred             EEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeC-CCcEEEEEe---------------------
Confidence            457888999 99987 4578999998632 3456799999999999997 567899871                     


Q ss_pred             ceEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCC
Q 008046          160 DRHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSW  204 (579)
Q Consensus       160 ~~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~  204 (579)
                                +....|.|.+.|+++|+..++  .  .+.|.++++
T Consensus        78 ----------t~~~~~~~~l~L~ddGNlvly--~--~~~W~S~t~  108 (109)
T d1kj1a_          78 ----------SVRGNGNYVLVLQEDGNVVIY--G--SDIWSTGTY  108 (109)
T ss_dssp             ----------CCCCSSCCEEEECTTSCEEEE--C--CEEEECCCC
T ss_pred             ----------eECCCCCEEEEEeCCCcEEEE--C--CCEecCCCc
Confidence                      112346789999999987654  2  357887653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.85  E-value=1.7e-09  Score=105.92  Aligned_cols=88  Identities=18%  Similarity=0.308  Sum_probs=74.1

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCC-CceeceeEEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQH-RNLVKLLGCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~nlv~l~g~~~~~~~~~lV~Ey  550 (579)
                      ++|...++||+|+||.||+|+.. +++.||||.++...  ....+.+|++.+..++| +|++.+.++...+...++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            46778889999999999999965 48899999986432  23457888899999865 8999999999999999999999


Q ss_pred             cCCCCHHHHhcCC
Q 008046          551 MPNKSLDFFIFDI  563 (579)
Q Consensus       551 ~~~GsL~~~l~~~  563 (579)
                      + +|+|.+++...
T Consensus        83 ~-~~~l~~~~~~~   94 (293)
T d1csna_          83 L-GPSLEDLLDLC   94 (293)
T ss_dssp             C-CCBHHHHHHHT
T ss_pred             c-CCCHHHHHHhh
Confidence            9 68999988653

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1.1e-09  Score=107.74  Aligned_cols=90  Identities=22%  Similarity=0.422  Sum_probs=68.1

Q ss_pred             cccccccceecccCceeEEEEEec-C-CcEEEEEEecCC--CcccHHHHHHHHHHHhcC---CCCceeceeEEEEE----
Q 008046          472 TDNFASYNKLGEGGFGPVYKGTLV-E-GQEIAVKRLSKG--SGQGMEEFKNEVTLIARL---QHRNLVKLLGCCIQ----  540 (579)
Q Consensus       472 t~~f~~~~~lG~G~fG~V~kg~~~-~-g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l---~H~nlv~l~g~~~~----  540 (579)
                      .++|...++||+|+||.||++... . ++.||||+++..  .......+.+|+.+|+.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            467888899999999999999863 3 567999998643  222234567788776655   89999999999864    


Q ss_pred             -CCeEEEEEeccCCCCHHHHhc
Q 008046          541 -ADESMLIYEYMPNKSLDFFIF  561 (579)
Q Consensus       541 -~~~~~lV~Ey~~~GsL~~~l~  561 (579)
                       ....++++||+.++.+.....
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~  107 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK  107 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH
T ss_pred             cCceEEEEEEeccCCchhhhhh
Confidence             236789999998877655443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.76  E-value=6.5e-09  Score=101.83  Aligned_cols=87  Identities=22%  Similarity=0.359  Sum_probs=68.0

Q ss_pred             ccccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCCCCceecee-EEEEECCeEEEEEec
Q 008046          473 DNFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQHRNLVKLL-GCCIQADESMLIYEY  550 (579)
Q Consensus       473 ~~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~nlv~l~-g~~~~~~~~~lV~Ey  550 (579)
                      +.|...++||+|+||.||+|... +++.||||.+....  ..+++..|++++..++|+|++..+ .+....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            45888899999999999999864 48899999987542  234688999999999877665555 445677889999999


Q ss_pred             cCCCCHHHHhcC
Q 008046          551 MPNKSLDFFIFD  562 (579)
Q Consensus       551 ~~~GsL~~~l~~  562 (579)
                      + +|+|.+.+..
T Consensus        85 ~-~~~l~~~~~~   95 (299)
T d1ckia_          85 L-GPSLEDLFNF   95 (299)
T ss_dssp             C-CCBHHHHHHH
T ss_pred             c-CCchhhhhhh
Confidence            9 5677666643

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.63  E-value=1.3e-07  Score=77.89  Aligned_cols=88  Identities=20%  Similarity=0.360  Sum_probs=64.8

Q ss_pred             ceEEEecCC-eEEEcCCCcEEEeecCCCCCCCcEEEEecCCCEEEEcCCCCceeeeeccCCCCccCCCCeecccccCCCc
Q 008046           82 GLLNVTSKG-IVLLDGRDRIFWSSNTSITMKNPVVQLMDSGNLVLTDGNYNSLLWQSFDHPCDTLLPGMKLGRNFKTGMD  160 (579)
Q Consensus        82 ~~l~~~~~G-L~l~~~~~~~~Wst~~~~~~~~~~a~lldsGNlVL~~~~~~~~lWQSFd~PTDTlLpgq~l~~~~~tg~~  160 (579)
                      -.|.+..|| |||.+. +.+||++++......+.++|..+|||||++.  +..+|.|                       
T Consensus        21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~--~~~~w~s-----------------------   74 (112)
T d1xd5a_          21 YLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYSG--SRAIWAS-----------------------   74 (112)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEET--TEEEEEC-----------------------
T ss_pred             EEEEEcCCCCEEEEcC-CcEEEEccCccCCCCcEEEEeccccEEEEec--CCeEEEE-----------------------
Confidence            568899999 999874 5789999976545567899999999999985  4566644                       


Q ss_pred             eEEEeccCCCCCCCcceEEeecCCCCcEEEEEcCCeeeeecCCC
Q 008046          161 RHLSSWKSINDPAPGEFSLWIDTHGFPQLVLRKGSVLQYRAGSW  204 (579)
Q Consensus       161 ~~L~S~~s~~dps~G~~~l~~~~~g~~~~~~~~~~~~y~~~g~~  204 (579)
                              .+....|.|.+.|+++|+..++- ....+.|.+++-
T Consensus        75 --------~t~~~~~~~~l~L~ddGNlvly~-~~~~~~W~S~t~  109 (112)
T d1xd5a_          75 --------NTNRQNGNYYLILQRDRNVVIYD-NSNNAIWATHTN  109 (112)
T ss_dssp             --------CCCCSCCCCEEEECTTSCEEEEC-TTSCEEEECCCC
T ss_pred             --------eeccCCCceEEEEcCCCCEEEEC-CCCcEEecCCCc
Confidence                    12223467899999999765542 224578988753

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.10  E-value=1.9e-06  Score=77.81  Aligned_cols=78  Identities=21%  Similarity=0.182  Sum_probs=58.0

Q ss_pred             ccceecccCceeEEEEEecCCcEEEEEEecCCCc------------------ccHHHHHHHHHHHhcCCCCceeceeEEE
Q 008046          477 SYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSG------------------QGMEEFKNEVTLIARLQHRNLVKLLGCC  538 (579)
Q Consensus       477 ~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~nlv~l~g~~  538 (579)
                      ..++||+|+||.||+|...+|+.||||.++....                  ........|...+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            3579999999999999988899999998753210                  0012345688889999999999887652


Q ss_pred             EECCeEEEEEeccCCCCHHH
Q 008046          539 IQADESMLIYEYMPNKSLDF  558 (579)
Q Consensus       539 ~~~~~~~lV~Ey~~~GsL~~  558 (579)
                        .  .+++|||+++..+.+
T Consensus        84 --~--~~lvme~~~~~~~~~   99 (191)
T d1zara2          84 --G--NAVLMELIDAKELYR   99 (191)
T ss_dssp             --T--TEEEEECCCCEEGGG
T ss_pred             --C--CEEEEEeeccccccc
Confidence              2  368999998766543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.06  E-value=2.7e-06  Score=84.85  Aligned_cols=81  Identities=19%  Similarity=0.283  Sum_probs=62.0

Q ss_pred             cccccceecccCceeEEEEEec-CCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-----------CCceeceeEEEEE-
Q 008046          474 NFASYNKLGEGGFGPVYKGTLV-EGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-----------HRNLVKLLGCCIQ-  540 (579)
Q Consensus       474 ~f~~~~~lG~G~fG~V~kg~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~nlv~l~g~~~~-  540 (579)
                      .|...++||+|+||+||+++.. +|+.||||+++.. ....+.+.+|+.++.+++           |+|+|++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            3777889999999999999974 5899999999754 223467888998888775           5789999988754 


Q ss_pred             -CCeEEEEEeccCCCC
Q 008046          541 -ADESMLIYEYMPNKS  555 (579)
Q Consensus       541 -~~~~~lV~Ey~~~Gs  555 (579)
                       .....++++++..+.
T Consensus        93 ~~~~~~~~~~~~~~~~  108 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGE  108 (362)
T ss_dssp             ETTEEEEEEEECCCCE
T ss_pred             cccceeeeeeeccccc
Confidence             345666776665544

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.05  E-value=0.025  Score=33.84  Aligned_cols=32  Identities=38%  Similarity=0.900  Sum_probs=25.9

Q ss_pred             CCCccccccCCCccccCC-CCCCCCCCCCCccCC
Q 008046          276 DRCDLYSVCGANARCTTN-SSRRCDCLEGFVPKS  308 (579)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~~  308 (579)
                      |.|.+...|| +|-|+.- +.-.|.|-.||+|-.
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence            6799999999 7889743 455799999999854

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.81  E-value=0.034  Score=35.53  Aligned_cols=31  Identities=32%  Similarity=0.883  Sum_probs=24.5

Q ss_pred             CCCcc-ccccCCCccccCC-CCCCCCCCCCCcc
Q 008046          276 DRCDL-YSVCGANARCTTN-SSRRCDCLEGFVP  306 (579)
Q Consensus       276 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~  306 (579)
                      |+|.. ...|..+|.|... +...|.|++||+-
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G   36 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTG   36 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcC
Confidence            56875 5689999999754 5568999999974

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.88  E-value=0.63  Score=41.89  Aligned_cols=93  Identities=13%  Similarity=0.017  Sum_probs=60.1

Q ss_pred             HHHhcccccccceecccCceeEEEEEecCCcEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCceeceeEEEEECCeEEE
Q 008046          468 IAKATDNFASYNKLGEGGFGPVYKGTLVEGQEIAVKRLSKGSGQGMEEFKNEVTLIARLQ-HRNLVKLLGCCIQADESML  546 (579)
Q Consensus       468 l~~at~~f~~~~~lG~G~fG~V~kg~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~nlv~l~g~~~~~~~~~l  546 (579)
                      +...-..+...+..+.++-..||+... +++.+.+|+...........+.+|...+..+. |-.+.+++.+...++..++
T Consensus         9 l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            333334444333323333467898764 45567788776443333445778888877663 4456788888888888999


Q ss_pred             EEeccCCCCHHHHhc
Q 008046          547 IYEYMPNKSLDFFIF  561 (579)
Q Consensus       547 V~Ey~~~GsL~~~l~  561 (579)
                      |||++++..+.+...
T Consensus        88 v~~~l~G~~~~~~~~  102 (263)
T d1j7la_          88 LMSEADGVLCSEEYE  102 (263)
T ss_dssp             EEECCSSEEHHHHTT
T ss_pred             EEEeccccccccccc
Confidence            999999988866543

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.29  E-value=0.085  Score=32.95  Aligned_cols=31  Identities=39%  Similarity=0.940  Sum_probs=23.3

Q ss_pred             CCCccccccCCCccccCC-CCCCCCCCCCCccC
Q 008046          276 DRCDLYSVCGANARCTTN-SSRRCDCLEGFVPK  307 (579)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  307 (579)
                      |.|. +..|...|.|... ....|.|++||.-.
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G~   32 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGK   32 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEETT
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCcC
Confidence            3565 4678899999754 56789999999754

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.05  E-value=0.21  Score=31.81  Aligned_cols=31  Identities=26%  Similarity=0.696  Sum_probs=23.5

Q ss_pred             CCCCccccccCCCccccCC-CCCCCCCCCCCcc
Q 008046          275 LDRCDLYSVCGANARCTTN-SSRRCDCLEGFVP  306 (579)
Q Consensus       275 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~  306 (579)
                      .|+|..+. |+.++.|... +.-.|.|++||+.
T Consensus         5 idEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPD-VCKHGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcC-CCCCCEeECCCCCeEeECCCCccc
Confidence            46797654 5568899754 5678999999975

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.27  E-value=0.13  Score=32.10  Aligned_cols=31  Identities=23%  Similarity=0.654  Sum_probs=23.0

Q ss_pred             CCCccccccCCCccccCC-CCCCCCCCCCCccC
Q 008046          276 DRCDLYSVCGANARCTTN-SSRRCDCLEGFVPK  307 (579)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  307 (579)
                      |.|. +..|...|.|... +...|.|++||...
T Consensus         2 d~C~-~~PC~n~g~C~~~~~~y~C~C~~G~~G~   33 (39)
T d2vj3a2           2 NECV-SNPCQNDATCLDQIGEFQCICMPGYEGV   33 (39)
T ss_dssp             CTTT-TCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred             cCCc-CCCCCCCCEEECCCCCEEEeCCCCCccC
Confidence            4563 4579999999753 56679999999754

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.87  E-value=0.36  Score=30.30  Aligned_cols=30  Identities=30%  Similarity=0.734  Sum_probs=22.4

Q ss_pred             CCCccccccCCCccccCC-CCCCCCCCCCCccC
Q 008046          276 DRCDLYSVCGANARCTTN-SSRRCDCLEGFVPK  307 (579)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  307 (579)
                      |+|..++.|.  .+|... +...|.|++||...
T Consensus         2 dEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           2 DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CTTTTTTSCS--SCEECSSSCCEECCCTTEEEC
T ss_pred             ccCCCCCCCC--CEeECCCCCEEeECCCCCeEC
Confidence            5787777774  578654 56789999999864

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.51  E-value=0.17  Score=32.38  Aligned_cols=32  Identities=28%  Similarity=0.832  Sum_probs=23.2

Q ss_pred             CCCccc-cccCCCccccCC-CCCCCCCCCCCccCC
Q 008046          276 DRCDLY-SVCGANARCTTN-SSRRCDCLEGFVPKS  308 (579)
Q Consensus       276 ~~C~~~-~~CG~~g~C~~~-~~~~C~C~~Gf~~~~  308 (579)
                      |+|... ..|. ++.|... +...|.|++||+...
T Consensus         4 dEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             cccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            678764 4564 7899653 567899999998643

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.97  E-value=0.13  Score=32.89  Aligned_cols=31  Identities=26%  Similarity=0.607  Sum_probs=23.6

Q ss_pred             CCCccccccCCCccccCC-CCCCCCCCCCCccC
Q 008046          276 DRCDLYSVCGANARCTTN-SSRRCDCLEGFVPK  307 (579)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  307 (579)
                      |+|..+..| -.+.|... +...|.|++||+..
T Consensus         4 dEC~~~~~~-c~~~C~Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           4 NECLDPTTC-ISGNCVNTPGSYICDCPPDFELN   35 (43)
T ss_dssp             CGGGSTTSS-BTSEEEEETTEEEEECCTTCEEC
T ss_pred             cccCCCCcC-cCCEeECCCCCEEEecCCCCEEC
Confidence            678877665 47899653 56689999999865

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.17  E-value=0.14  Score=31.85  Aligned_cols=32  Identities=31%  Similarity=0.637  Sum_probs=24.2

Q ss_pred             CCCCccccccCCCccccCC-CCCCCCCCCCCccC
Q 008046          275 LDRCDLYSVCGANARCTTN-SSRRCDCLEGFVPK  307 (579)
Q Consensus       275 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  307 (579)
                      .|+|. +..|-..|.|... ....|.|++||...
T Consensus         3 ~d~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G~   35 (39)
T d1edmb_           3 GDQCE-SNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCTTT-TCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             cccCC-CCCCCCCcEEEcCCCCEEEECCCCCCCC
Confidence            35676 5779999999653 55689999999743