Query 008049
Match_columns 579
No_of_seqs 461 out of 3700
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 18:48:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008049.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008049hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 3.1E-69 6.7E-74 556.3 34.1 393 22-432 4-398 (409)
2 COG0429 Predicted hydrolase of 100.0 4.1E-54 8.9E-59 429.2 28.2 318 92-424 18-342 (345)
3 PLN02511 hydrolase 100.0 5.3E-51 1.2E-55 435.3 37.5 345 68-425 19-368 (388)
4 PRK10985 putative hydrolase; P 100.0 3.9E-45 8.5E-50 381.5 35.6 318 91-424 2-322 (324)
5 PLN02298 hydrolase, alpha/beta 99.9 1.8E-24 3.9E-29 226.2 22.7 281 117-425 29-320 (330)
6 PHA02857 monoglyceride lipase; 99.9 2.4E-23 5.3E-28 211.6 23.1 263 124-422 4-273 (276)
7 PLN02385 hydrolase; alpha/beta 99.9 1.2E-23 2.6E-28 221.9 21.3 252 159-423 85-346 (349)
8 COG2267 PldB Lysophospholipase 99.9 8.5E-22 1.8E-26 202.7 22.8 273 119-423 8-295 (298)
9 PLN02652 hydrolase; alpha/beta 99.9 5.3E-21 1.2E-25 204.2 26.0 271 120-424 110-389 (395)
10 PRK10749 lysophospholipase L2; 99.9 8.6E-22 1.9E-26 206.2 19.4 285 103-421 18-328 (330)
11 PRK00870 haloalkane dehalogena 99.9 9.8E-22 2.1E-26 202.8 19.2 268 115-422 14-301 (302)
12 TIGR02240 PHA_depoly_arom poly 99.9 1.3E-21 2.7E-26 199.3 19.0 245 161-431 25-275 (276)
13 KOG1455 Lysophospholipase [Lip 99.9 1.4E-21 3E-26 193.7 18.3 280 117-421 24-311 (313)
14 PLN02824 hydrolase, alpha/beta 99.9 3.4E-21 7.5E-26 197.8 20.9 242 161-421 29-293 (294)
15 PRK03592 haloalkane dehalogena 99.9 3.2E-21 6.9E-26 198.2 20.2 246 161-423 27-290 (295)
16 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.6E-20 5.5E-25 189.4 21.6 240 161-420 30-281 (282)
17 TIGR02427 protocat_pcaD 3-oxoa 99.9 6.5E-21 1.4E-25 187.3 16.2 237 160-419 12-250 (251)
18 PLN02679 hydrolase, alpha/beta 99.9 6.5E-20 1.4E-24 194.3 23.7 239 160-422 87-357 (360)
19 TIGR01738 bioH putative pimelo 99.9 5.4E-21 1.2E-25 187.5 14.0 232 161-419 4-245 (245)
20 TIGR03611 RutD pyrimidine util 99.9 3.1E-20 6.7E-25 184.2 19.6 240 159-421 11-257 (257)
21 PRK13604 luxD acyl transferase 99.9 4.8E-20 1E-24 187.5 21.3 250 121-425 10-262 (307)
22 TIGR01607 PST-A Plasmodium sub 99.9 1.3E-20 2.7E-25 197.5 17.5 272 125-420 2-331 (332)
23 TIGR03056 bchO_mg_che_rel puta 99.8 7E-20 1.5E-24 184.9 20.9 246 160-420 27-278 (278)
24 TIGR03695 menH_SHCHC 2-succiny 99.8 2E-20 4.3E-25 183.3 14.8 241 162-420 2-251 (251)
25 PRK10349 carboxylesterase BioH 99.8 3.1E-20 6.6E-25 186.7 16.0 233 162-421 14-255 (256)
26 TIGR01250 pro_imino_pep_2 prol 99.8 2.7E-19 5.9E-24 180.0 22.5 248 161-420 25-288 (288)
27 PRK10673 acyl-CoA esterase; Pr 99.8 6E-20 1.3E-24 183.7 17.3 234 159-421 14-254 (255)
28 PLN02965 Probable pheophorbida 99.8 3.8E-20 8.3E-25 186.3 15.8 238 163-422 5-253 (255)
29 COG1647 Esterase/lipase [Gener 99.8 2.6E-20 5.5E-25 176.5 12.8 224 162-420 16-242 (243)
30 PF12697 Abhydrolase_6: Alpha/ 99.8 6.5E-20 1.4E-24 176.9 16.0 215 164-402 1-220 (228)
31 PRK06489 hypothetical protein; 99.8 2E-19 4.2E-24 190.7 21.0 253 161-423 69-358 (360)
32 PLN02872 triacylglycerol lipas 99.8 5E-20 1.1E-24 196.2 16.4 308 101-423 26-390 (395)
33 PRK11126 2-succinyl-6-hydroxy- 99.8 6.8E-20 1.5E-24 182.0 16.2 231 161-421 2-241 (242)
34 PLN02578 hydrolase 99.8 1.2E-19 2.5E-24 191.9 18.7 242 162-420 87-353 (354)
35 PRK03204 haloalkane dehalogena 99.8 4.1E-19 8.9E-24 182.2 21.8 242 161-419 34-285 (286)
36 PLN03087 BODYGUARD 1 domain co 99.8 2.6E-19 5.6E-24 194.3 20.9 251 160-421 200-478 (481)
37 PRK07581 hypothetical protein; 99.8 3.4E-19 7.3E-24 187.1 19.8 255 160-424 40-338 (339)
38 KOG4178 Soluble epoxide hydrol 99.8 4.1E-19 8.8E-24 178.9 16.8 250 159-422 42-320 (322)
39 TIGR01249 pro_imino_pep_1 prol 99.8 1.1E-18 2.3E-23 180.8 20.0 126 121-271 5-130 (306)
40 PRK05077 frsA fermentation/res 99.8 5.4E-18 1.2E-22 182.5 26.1 244 118-422 166-412 (414)
41 PLN02894 hydrolase, alpha/beta 99.8 1.1E-17 2.4E-22 179.7 26.4 260 159-429 103-392 (402)
42 KOG4409 Predicted hydrolase/ac 99.8 1.1E-17 2.4E-22 169.0 22.9 302 93-422 37-364 (365)
43 KOG1454 Predicted hydrolase/ac 99.8 2.2E-18 4.7E-23 179.4 16.1 277 121-422 26-324 (326)
44 PRK08775 homoserine O-acetyltr 99.8 1.9E-18 4.1E-23 181.9 14.9 231 180-424 86-341 (343)
45 TIGR03100 hydr1_PEP hydrolase, 99.8 2.2E-17 4.7E-22 168.5 21.7 237 161-420 26-273 (274)
46 PLN03084 alpha/beta hydrolase 99.8 3.6E-17 7.8E-22 173.9 23.7 239 160-420 126-382 (383)
47 KOG4391 Predicted alpha/beta h 99.8 9.7E-18 2.1E-22 157.7 16.8 230 117-424 51-284 (300)
48 PRK14875 acetoin dehydrogenase 99.8 2.2E-17 4.8E-22 174.8 21.2 239 159-421 129-370 (371)
49 TIGR01392 homoserO_Ac_trn homo 99.8 5.4E-18 1.2E-22 179.0 16.3 111 161-273 31-164 (351)
50 PRK05855 short chain dehydroge 99.8 3.6E-17 7.9E-22 183.3 21.2 270 123-424 5-294 (582)
51 PLN02211 methyl indole-3-aceta 99.7 4E-17 8.7E-22 166.4 18.5 106 159-270 16-121 (273)
52 PRK00175 metX homoserine O-ace 99.7 7.2E-17 1.6E-21 172.2 20.0 107 160-272 47-183 (379)
53 TIGR01836 PHA_synth_III_C poly 99.7 3.3E-17 7.2E-22 173.0 14.9 109 162-275 63-175 (350)
54 PRK10566 esterase; Provisional 99.7 4.1E-16 8.9E-21 156.0 21.0 209 159-422 25-248 (249)
55 KOG1552 Predicted alpha/beta h 99.7 3.1E-16 6.8E-21 153.0 17.4 195 160-425 59-255 (258)
56 PF00561 Abhydrolase_1: alpha/ 99.7 7.9E-17 1.7E-21 157.3 13.2 209 191-403 1-220 (230)
57 PLN02980 2-oxoglutarate decarb 99.7 4.8E-15 1E-19 182.7 26.5 249 159-425 1369-1642(1655)
58 KOG2382 Predicted alpha/beta h 99.7 4.3E-16 9.3E-21 157.2 12.9 244 159-422 50-313 (315)
59 PF12695 Abhydrolase_5: Alpha/ 99.7 1.1E-15 2.5E-20 139.2 14.4 144 163-398 1-145 (145)
60 COG1506 DAP2 Dipeptidyl aminop 99.6 6.1E-15 1.3E-19 166.7 20.8 246 118-424 363-618 (620)
61 KOG2984 Predicted hydrolase [G 99.6 7.8E-16 1.7E-20 143.5 10.0 228 163-421 44-275 (277)
62 TIGR00976 /NonD putative hydro 99.6 1.1E-14 2.5E-19 162.6 19.7 133 125-275 1-136 (550)
63 PRK11071 esterase YqiA; Provis 99.6 7.4E-15 1.6E-19 141.6 15.0 184 162-420 2-189 (190)
64 PF00326 Peptidase_S9: Prolyl 99.6 2.9E-15 6.3E-20 146.7 11.8 196 181-424 5-211 (213)
65 PRK06765 homoserine O-acetyltr 99.6 3.6E-14 7.9E-19 151.3 19.9 113 159-273 54-198 (389)
66 TIGR01838 PHA_synth_I poly(R)- 99.6 3.5E-14 7.6E-19 155.8 18.9 235 160-403 187-460 (532)
67 TIGR03101 hydr2_PEP hydrolase, 99.6 3.2E-14 6.9E-19 143.8 16.7 111 160-273 24-136 (266)
68 PF06500 DUF1100: Alpha/beta h 99.6 1.1E-13 2.3E-18 145.4 17.8 242 118-422 163-409 (411)
69 COG2945 Predicted hydrolase of 99.5 2.8E-13 6.1E-18 126.3 15.0 176 159-420 26-205 (210)
70 PRK07868 acyl-CoA synthetase; 99.5 3.7E-13 7.9E-18 160.3 20.1 255 159-424 65-363 (994)
71 PLN00021 chlorophyllase 99.5 6.1E-13 1.3E-17 137.9 19.2 195 159-425 50-286 (313)
72 PLN02442 S-formylglutathione h 99.5 1.5E-12 3.2E-17 133.6 21.2 207 129-398 28-262 (283)
73 KOG4667 Predicted esterase [Li 99.5 3.1E-13 6.8E-18 127.6 13.9 205 159-400 31-241 (269)
74 PRK10115 protease 2; Provision 99.5 9E-13 1.9E-17 150.3 18.6 223 119-398 415-653 (686)
75 PRK11460 putative hydrolase; P 99.5 1.7E-12 3.6E-17 129.3 18.2 178 159-424 14-210 (232)
76 KOG2564 Predicted acetyltransf 99.5 2E-12 4.3E-17 126.7 16.0 106 159-268 72-179 (343)
77 KOG2624 Triglyceride lipase-ch 99.4 1.5E-12 3.2E-17 137.7 16.0 285 117-423 45-399 (403)
78 TIGR02821 fghA_ester_D S-formy 99.4 8.3E-12 1.8E-16 127.4 20.9 207 129-399 23-257 (275)
79 TIGR01840 esterase_phb esteras 99.4 8.3E-12 1.8E-16 122.4 18.4 110 159-271 11-130 (212)
80 COG4757 Predicted alpha/beta h 99.4 9.5E-13 2.1E-17 125.7 10.7 250 123-403 8-267 (281)
81 COG0596 MhpC Predicted hydrola 99.4 8.3E-12 1.8E-16 121.4 16.6 102 161-272 21-124 (282)
82 PF05448 AXE1: Acetyl xylan es 99.4 4.9E-12 1.1E-16 131.4 15.1 245 116-421 52-319 (320)
83 PF02129 Peptidase_S15: X-Pro 99.4 6.6E-13 1.4E-17 135.3 8.1 130 129-275 1-140 (272)
84 PRK10162 acetyl esterase; Prov 99.4 4.5E-11 9.6E-16 124.7 20.6 246 119-423 56-316 (318)
85 PF01738 DLH: Dienelactone hyd 99.3 5.4E-12 1.2E-16 124.1 11.3 186 159-422 12-217 (218)
86 COG0412 Dienelactone hydrolase 99.2 7.7E-10 1.7E-14 110.3 20.7 207 122-423 4-234 (236)
87 TIGR01839 PHA_synth_II poly(R) 99.2 1.8E-10 3.9E-15 125.7 17.1 108 161-275 215-332 (560)
88 PF02230 Abhydrolase_2: Phosph 99.2 2.3E-10 5E-15 112.5 15.9 182 158-422 11-215 (216)
89 COG3458 Acetyl esterase (deace 99.2 1.3E-10 2.8E-15 113.8 13.4 242 117-422 53-317 (321)
90 PF08538 DUF1749: Protein of u 99.2 1.2E-10 2.6E-15 117.9 12.5 245 160-420 32-303 (303)
91 TIGR03230 lipo_lipase lipoprot 99.2 1.3E-10 2.9E-15 124.4 13.4 111 159-271 39-154 (442)
92 TIGR01849 PHB_depoly_PhaZ poly 99.2 2E-10 4.3E-15 121.9 13.9 249 162-421 103-405 (406)
93 PRK05371 x-prolyl-dipeptidyl a 99.2 2.8E-10 6E-15 131.0 16.1 231 181-424 270-521 (767)
94 cd00707 Pancreat_lipase_like P 99.2 6.6E-11 1.4E-15 120.7 9.8 111 159-271 34-147 (275)
95 COG2021 MET2 Homoserine acetyl 99.2 1.2E-09 2.6E-14 112.3 17.9 114 159-274 49-185 (368)
96 PF02273 Acyl_transf_2: Acyl t 99.1 1.1E-09 2.3E-14 106.0 14.8 250 121-424 3-254 (294)
97 PF06342 DUF1057: Alpha/beta h 99.1 4.7E-09 1E-13 104.4 19.2 126 125-271 11-137 (297)
98 COG2936 Predicted acyl esteras 99.1 1.2E-09 2.5E-14 118.9 15.0 138 119-276 18-164 (563)
99 PF06821 Ser_hydrolase: Serine 99.1 1.5E-09 3.3E-14 102.7 12.2 157 164-405 1-160 (171)
100 COG3571 Predicted hydrolase of 99.0 8E-09 1.7E-13 93.7 14.9 165 162-398 15-181 (213)
101 PF07859 Abhydrolase_3: alpha/ 99.0 7.9E-10 1.7E-14 107.7 9.0 102 164-273 1-112 (211)
102 COG0657 Aes Esterase/lipase [L 99.0 1.2E-08 2.6E-13 106.1 17.3 130 126-275 57-195 (312)
103 PF12740 Chlorophyllase2: Chlo 98.9 2.8E-08 6.2E-13 99.0 16.5 103 159-270 15-130 (259)
104 TIGR03502 lipase_Pla1_cef extr 98.9 8.8E-09 1.9E-13 117.0 12.8 94 160-255 448-576 (792)
105 PF09752 DUF2048: Uncharacteri 98.9 4.2E-08 9.1E-13 101.0 16.6 107 159-269 90-208 (348)
106 PF12146 Hydrolase_4: Putative 98.9 5.3E-09 1.2E-13 85.9 7.6 46 160-207 15-60 (79)
107 KOG1515 Arylacetamide deacetyl 98.9 1.5E-07 3.2E-12 97.9 20.0 253 125-422 66-335 (336)
108 KOG2931 Differentiation-relate 98.9 1.1E-06 2.4E-11 87.5 24.2 271 120-422 22-306 (326)
109 COG4188 Predicted dienelactone 98.8 2E-08 4.3E-13 103.7 11.8 97 159-257 69-182 (365)
110 COG0400 Predicted esterase [Ge 98.8 8.3E-08 1.8E-12 93.3 15.3 175 158-422 15-205 (207)
111 COG3208 GrsT Predicted thioest 98.8 1E-07 2.2E-12 93.2 15.3 209 159-402 5-220 (244)
112 PF00975 Thioesterase: Thioest 98.8 6.9E-08 1.5E-12 95.2 14.5 103 163-272 2-105 (229)
113 KOG2100 Dipeptidyl aminopeptid 98.8 1.9E-07 4.2E-12 107.4 19.2 240 117-425 497-750 (755)
114 PF12715 Abhydrolase_7: Abhydr 98.8 4.4E-09 9.5E-14 109.2 4.9 129 124-270 92-259 (390)
115 COG3243 PhaC Poly(3-hydroxyalk 98.8 2.5E-08 5.5E-13 103.9 10.1 109 161-275 107-221 (445)
116 PF10230 DUF2305: Uncharacteri 98.8 1.8E-07 3.9E-12 95.0 16.0 107 161-271 2-122 (266)
117 KOG2281 Dipeptidyl aminopeptid 98.8 1.4E-07 3E-12 101.8 15.6 238 115-421 605-866 (867)
118 PF07224 Chlorophyllase: Chlor 98.8 1.2E-07 2.7E-12 92.8 13.6 103 159-270 44-156 (307)
119 PF03583 LIP: Secretory lipase 98.8 3.3E-07 7.1E-12 94.3 17.4 234 178-424 14-283 (290)
120 PF05728 UPF0227: Uncharacteri 98.8 3.1E-07 6.7E-12 88.1 15.9 90 164-273 2-93 (187)
121 KOG3043 Predicted hydrolase re 98.7 6.4E-08 1.4E-12 92.8 9.8 159 162-401 40-211 (242)
122 PF06028 DUF915: Alpha/beta hy 98.7 1.3E-07 2.8E-12 95.0 11.0 111 163-275 13-147 (255)
123 PF03096 Ndr: Ndr family; Int 98.6 6.8E-07 1.5E-11 90.0 15.3 249 159-422 21-279 (283)
124 PF07819 PGAP1: PGAP1-like pro 98.6 4.7E-07 1E-11 89.6 14.1 110 161-275 4-127 (225)
125 PF03403 PAF-AH_p_II: Platelet 98.6 7.4E-08 1.6E-12 102.6 8.8 106 159-269 98-260 (379)
126 COG3545 Predicted esterase of 98.6 1.1E-06 2.4E-11 81.6 14.4 176 162-421 3-178 (181)
127 COG4099 Predicted peptidase [G 98.5 3.8E-06 8.2E-11 83.7 16.3 124 128-272 169-305 (387)
128 PF06057 VirJ: Bacterial virul 98.5 6.1E-07 1.3E-11 85.0 9.8 101 163-270 4-106 (192)
129 KOG4627 Kynurenine formamidase 98.5 7.3E-07 1.6E-11 84.3 9.2 187 159-407 65-256 (270)
130 PF10503 Esterase_phd: Esteras 98.5 2.3E-06 5E-11 84.1 12.9 109 159-270 14-131 (220)
131 PLN02733 phosphatidylcholine-s 98.3 1.4E-06 3.1E-11 94.1 8.9 97 176-275 107-205 (440)
132 PF01674 Lipase_2: Lipase (cla 98.3 4.8E-07 1E-11 88.8 4.0 89 164-254 4-95 (219)
133 KOG1553 Predicted alpha/beta h 98.3 8.9E-06 1.9E-10 82.4 12.3 134 118-273 212-347 (517)
134 PF08840 BAAT_C: BAAT / Acyl-C 98.3 7.9E-07 1.7E-11 87.4 4.7 154 218-401 4-165 (213)
135 COG3509 LpqC Poly(3-hydroxybut 98.3 9.3E-06 2E-10 81.4 12.1 125 129-271 43-179 (312)
136 PF05677 DUF818: Chlamydia CHL 98.3 8.6E-06 1.9E-10 83.3 12.0 118 119-256 111-237 (365)
137 PF00151 Lipase: Lipase; Inte 98.2 6.2E-07 1.3E-11 93.7 3.7 108 158-271 68-187 (331)
138 PF05990 DUF900: Alpha/beta hy 98.2 1.2E-05 2.5E-10 80.2 11.5 114 159-273 16-139 (233)
139 KOG3847 Phospholipase A2 (plat 98.2 1.5E-05 3.3E-10 80.0 11.9 106 158-268 115-272 (399)
140 KOG2237 Predicted serine prote 98.2 7.4E-06 1.6E-10 89.2 9.9 141 120-274 441-587 (712)
141 PF03959 FSH1: Serine hydrolas 98.1 7.8E-06 1.7E-10 80.2 8.8 108 160-270 3-144 (212)
142 KOG3253 Predicted alpha/beta h 98.1 1E-05 2.2E-10 87.3 9.3 168 159-402 174-349 (784)
143 PF05705 DUF829: Eukaryotic pr 98.1 9.7E-05 2.1E-09 73.7 15.2 219 164-419 2-240 (240)
144 PF11339 DUF3141: Protein of u 98.1 0.00011 2.3E-09 79.0 15.7 102 159-275 67-179 (581)
145 PRK10252 entF enterobactin syn 98.0 0.00024 5.2E-09 87.8 20.5 98 161-269 1068-1169(1296)
146 COG1770 PtrB Protease II [Amin 98.0 9.2E-05 2E-09 81.4 14.0 241 121-419 420-673 (682)
147 KOG2551 Phospholipase/carboxyh 98.0 0.00022 4.8E-09 68.9 14.7 65 353-425 159-223 (230)
148 PF00756 Esterase: Putative es 97.9 2.5E-05 5.4E-10 78.1 8.1 113 159-273 22-152 (251)
149 COG3319 Thioesterase domains o 97.9 7.5E-05 1.6E-09 75.0 11.0 103 162-272 1-104 (257)
150 COG4814 Uncharacterized protei 97.9 6.1E-05 1.3E-09 73.8 9.5 107 164-272 48-177 (288)
151 cd00312 Esterase_lipase Estera 97.9 4.5E-05 9.8E-10 84.4 9.3 127 130-272 76-214 (493)
152 PRK04940 hypothetical protein; 97.9 0.00063 1.4E-08 64.5 15.4 35 234-273 60-94 (180)
153 KOG4840 Predicted hydrolases o 97.8 0.00032 7E-09 67.4 11.9 107 161-274 36-147 (299)
154 PF05057 DUF676: Putative seri 97.8 6.2E-05 1.4E-09 74.1 7.4 40 234-273 78-127 (217)
155 COG4782 Uncharacterized protei 97.7 0.00022 4.8E-09 73.6 10.1 114 159-273 114-236 (377)
156 PF05577 Peptidase_S28: Serine 97.6 0.00027 5.9E-09 77.0 10.8 111 160-273 28-150 (434)
157 KOG2565 Predicted hydrolases o 97.6 0.00024 5.3E-09 73.1 9.1 95 163-264 154-257 (469)
158 PTZ00472 serine carboxypeptida 97.6 0.0011 2.3E-08 72.8 14.7 112 159-272 75-217 (462)
159 PRK10439 enterobactin/ferric e 97.5 0.00098 2.1E-08 72.0 13.2 106 159-270 207-322 (411)
160 KOG1551 Uncharacterized conser 97.5 0.001 2.3E-08 65.5 11.8 59 360-423 309-367 (371)
161 PF12048 DUF3530: Protein of u 97.5 0.0031 6.7E-08 65.6 15.4 113 159-273 85-231 (310)
162 KOG2112 Lysophospholipase [Lip 97.4 0.001 2.2E-08 63.8 10.3 178 162-421 4-203 (206)
163 COG2272 PnbA Carboxylesterase 97.4 0.00066 1.4E-08 72.9 9.6 113 159-272 92-218 (491)
164 KOG3101 Esterase D [General fu 97.4 0.00062 1.3E-08 65.1 8.1 129 131-273 26-181 (283)
165 KOG3975 Uncharacterized conser 97.4 0.0026 5.6E-08 62.5 12.5 110 159-270 27-146 (301)
166 COG1075 LipA Predicted acetylt 97.3 0.00064 1.4E-08 71.5 8.5 105 163-275 61-168 (336)
167 PLN02606 palmitoyl-protein thi 97.3 0.012 2.5E-07 60.2 17.0 103 164-273 29-134 (306)
168 COG1073 Hydrolases of the alph 97.3 0.00084 1.8E-08 67.7 9.0 73 349-422 223-297 (299)
169 COG1505 Serine proteases of th 97.3 0.00075 1.6E-08 73.6 8.8 160 99-274 372-538 (648)
170 PF00135 COesterase: Carboxyle 97.3 0.00065 1.4E-08 75.6 7.9 127 129-270 105-244 (535)
171 smart00824 PKS_TE Thioesterase 97.1 0.0056 1.2E-07 58.4 11.4 84 180-269 16-100 (212)
172 PLN02633 palmitoyl protein thi 97.1 0.026 5.7E-07 57.8 16.5 105 160-272 25-132 (314)
173 PF02450 LCAT: Lecithin:choles 97.0 0.002 4.4E-08 69.1 8.2 88 178-274 66-163 (389)
174 KOG3967 Uncharacterized conser 97.0 0.007 1.5E-07 58.0 10.6 114 159-272 99-228 (297)
175 KOG3724 Negative regulator of 96.8 0.0038 8.3E-08 69.9 8.0 103 160-272 88-221 (973)
176 PF04301 DUF452: Protein of un 96.6 0.044 9.6E-07 53.5 13.5 76 161-269 11-88 (213)
177 PF10340 DUF2424: Protein of u 96.6 0.015 3.3E-07 61.3 10.7 110 160-274 121-238 (374)
178 PF11144 DUF2920: Protein of u 96.6 0.019 4.1E-07 60.8 11.2 107 159-267 33-215 (403)
179 cd00741 Lipase Lipase. Lipase 96.5 0.0079 1.7E-07 55.5 6.9 54 218-271 12-67 (153)
180 PF04083 Abhydro_lipase: Parti 96.3 0.01 2.2E-07 46.3 5.4 50 117-176 9-58 (63)
181 PF01764 Lipase_3: Lipase (cla 96.1 0.014 3.1E-07 52.6 6.4 38 217-254 47-84 (140)
182 PLN02517 phosphatidylcholine-s 96.0 0.0092 2E-07 65.8 5.5 92 180-273 159-265 (642)
183 KOG2183 Prolylcarboxypeptidase 96.0 0.031 6.7E-07 58.8 9.0 105 161-271 81-202 (492)
184 COG2382 Fes Enterochelin ester 96.0 0.05 1.1E-06 55.4 10.1 107 159-271 96-212 (299)
185 PF08386 Abhydrolase_4: TAP-li 95.9 0.01 2.2E-07 51.3 4.5 60 357-421 34-93 (103)
186 KOG2541 Palmitoyl protein thio 95.8 0.078 1.7E-06 52.9 10.5 103 161-272 24-129 (296)
187 PF10142 PhoPQ_related: PhoPQ- 95.8 0.15 3.3E-06 54.0 13.4 153 232-425 170-323 (367)
188 PF07082 DUF1350: Protein of u 95.7 0.063 1.4E-06 53.3 9.3 96 161-268 17-122 (250)
189 cd00519 Lipase_3 Lipase (class 95.7 0.021 4.5E-07 56.5 6.1 52 218-270 112-166 (229)
190 PF00450 Peptidase_S10: Serine 95.5 0.21 4.5E-06 53.7 13.8 138 121-274 12-184 (415)
191 PF06259 Abhydrolase_8: Alpha/ 95.5 0.22 4.7E-06 47.4 12.0 52 218-271 92-144 (177)
192 COG3150 Predicted esterase [Ge 95.5 0.086 1.9E-06 49.0 8.8 48 218-270 43-90 (191)
193 COG0627 Predicted esterase [Ge 95.5 0.042 9E-07 57.2 7.7 112 159-273 52-189 (316)
194 COG2819 Predicted hydrolase of 95.2 0.7 1.5E-05 46.5 14.9 43 226-270 127-171 (264)
195 KOG2369 Lecithin:cholesterol a 95.2 0.013 2.8E-07 62.8 2.8 91 177-273 124-227 (473)
196 PF01083 Cutinase: Cutinase; 95.1 0.037 7.9E-07 52.8 5.6 56 217-272 64-123 (179)
197 KOG2182 Hydrolytic enzymes of 95.1 0.13 2.8E-06 55.6 10.1 111 159-272 84-208 (514)
198 PF11187 DUF2974: Protein of u 94.8 0.066 1.4E-06 53.0 6.6 53 218-271 69-123 (224)
199 PLN02454 triacylglycerol lipas 94.4 0.089 1.9E-06 56.3 6.6 38 217-254 209-248 (414)
200 PF02089 Palm_thioest: Palmito 94.2 0.091 2E-06 53.3 6.1 107 160-272 5-117 (279)
201 KOG4540 Putative lipase essent 94.1 0.092 2E-06 52.6 5.5 53 217-274 259-311 (425)
202 COG5153 CVT17 Putative lipase 94.1 0.092 2E-06 52.6 5.5 53 217-274 259-311 (425)
203 PLN00413 triacylglycerol lipas 94.0 0.13 2.9E-06 55.6 7.0 52 219-270 269-326 (479)
204 PLN02162 triacylglycerol lipas 93.9 0.13 2.9E-06 55.5 6.9 53 218-270 262-320 (475)
205 PF11288 DUF3089: Protein of u 93.8 0.11 2.5E-06 50.4 5.7 80 191-270 46-135 (207)
206 COG3946 VirJ Type IV secretory 93.5 0.19 4.2E-06 52.9 6.9 84 163-253 262-345 (456)
207 PLN03016 sinapoylglucose-malat 93.4 1 2.2E-05 49.1 12.8 111 159-269 64-208 (433)
208 PLN02934 triacylglycerol lipas 93.1 0.2 4.2E-06 54.8 6.6 53 218-270 305-363 (515)
209 COG4553 DepA Poly-beta-hydroxy 92.9 0.79 1.7E-05 46.4 10.0 255 161-424 103-409 (415)
210 PLN02209 serine carboxypeptida 92.8 1.6 3.4E-05 47.7 13.2 112 159-272 66-213 (437)
211 PF05576 Peptidase_S37: PS-10 92.3 0.23 5E-06 52.7 5.7 108 158-273 60-171 (448)
212 PLN02408 phospholipase A1 92.2 0.26 5.6E-06 52.1 6.0 38 217-254 181-220 (365)
213 KOG4372 Predicted alpha/beta h 91.9 0.28 6.1E-06 51.9 5.8 85 159-249 78-165 (405)
214 KOG1516 Carboxylesterase and r 91.5 0.67 1.5E-05 52.0 8.7 127 130-270 94-231 (545)
215 PLN02571 triacylglycerol lipas 91.3 0.29 6.3E-06 52.4 5.1 37 218-254 208-246 (413)
216 PLN02847 triacylglycerol lipas 91.1 0.44 9.5E-06 53.0 6.4 36 219-254 236-271 (633)
217 KOG2521 Uncharacterized conser 90.8 3.2 7E-05 43.7 12.1 245 159-425 37-293 (350)
218 KOG4569 Predicted lipase [Lipi 90.0 0.44 9.6E-06 50.1 5.1 59 212-270 149-211 (336)
219 PLN02324 triacylglycerol lipas 89.7 0.49 1.1E-05 50.7 5.1 38 217-254 196-235 (415)
220 PLN02719 triacylglycerol lipas 88.4 0.63 1.4E-05 50.9 5.0 38 217-254 276-318 (518)
221 PLN02802 triacylglycerol lipas 88.2 0.68 1.5E-05 50.7 5.1 37 218-254 312-350 (509)
222 PLN02753 triacylglycerol lipas 87.1 0.8 1.7E-05 50.3 4.8 37 217-253 290-331 (531)
223 PLN02310 triacylglycerol lipas 87.1 0.67 1.5E-05 49.6 4.2 37 218-254 189-229 (405)
224 PLN02761 lipase class 3 family 87.1 0.85 1.8E-05 50.1 5.0 37 217-253 271-313 (527)
225 COG2939 Carboxypeptidase C (ca 86.9 3.6 7.7E-05 45.0 9.5 95 159-255 99-219 (498)
226 KOG1282 Serine carboxypeptidas 86.5 7.3 0.00016 42.6 11.8 113 121-253 45-187 (454)
227 PLN03037 lipase class 3 family 85.5 0.86 1.9E-05 50.0 4.0 37 218-254 298-338 (525)
228 PF08237 PE-PPE: PE-PPE domain 83.6 4.5 9.7E-05 40.1 7.9 83 190-272 2-90 (225)
229 PF05277 DUF726: Protein of un 82.5 3.6 7.8E-05 43.3 7.0 43 232-274 218-263 (345)
230 KOG4388 Hormone-sensitive lipa 78.8 6.4 0.00014 43.6 7.4 102 159-271 394-508 (880)
231 COG4947 Uncharacterized protei 77.7 4.9 0.00011 37.8 5.4 50 221-273 88-138 (227)
232 COG3673 Uncharacterized conser 76.7 15 0.00031 38.1 8.8 97 159-255 29-143 (423)
233 PLN02213 sinapoylglucose-malat 75.7 8.8 0.00019 40.0 7.5 62 192-253 3-70 (319)
234 PF09994 DUF2235: Uncharacteri 75.0 18 0.00039 37.0 9.4 41 215-255 72-113 (277)
235 COG0529 CysC Adenylylsulfate k 74.9 18 0.00039 34.5 8.3 40 159-198 20-59 (197)
236 PF06309 Torsin: Torsin; Inte 72.9 5.6 0.00012 35.6 4.4 34 158-191 49-82 (127)
237 TIGR03712 acc_sec_asp2 accesso 72.5 6.6 0.00014 42.8 5.5 103 156-271 284-389 (511)
238 PF07519 Tannase: Tannase and 69.6 35 0.00075 37.8 10.6 88 184-274 53-153 (474)
239 PF06850 PHB_depo_C: PHB de-po 69.0 4.8 0.0001 38.7 3.3 67 354-421 130-201 (202)
240 PF01583 APS_kinase: Adenylyls 60.2 15 0.00032 34.2 4.7 39 161-199 1-39 (156)
241 KOG1202 Animal-type fatty acid 57.9 38 0.00082 41.1 8.2 97 159-270 2121-2218(2376)
242 COG4822 CbiK Cobalamin biosynt 55.7 38 0.00082 33.1 6.6 57 157-230 134-191 (265)
243 PF03205 MobB: Molybdopterin g 50.9 27 0.00059 31.7 4.8 46 164-209 2-47 (140)
244 PF07519 Tannase: Tannase and 50.8 50 0.0011 36.6 7.7 95 357-455 353-458 (474)
245 PF09949 DUF2183: Uncharacteri 49.4 1.3E+02 0.0028 25.7 8.4 81 180-265 14-96 (100)
246 KOG2385 Uncharacterized conser 49.0 32 0.00069 37.9 5.5 44 231-274 444-490 (633)
247 PF13396 PLDc_N: Phospholipase 47.4 8 0.00017 27.8 0.6 26 538-567 21-46 (46)
248 PF06441 EHN: Epoxide hydrolas 44.4 37 0.00079 29.7 4.3 18 159-176 90-107 (112)
249 KOG2029 Uncharacterized conser 42.6 17 0.00038 40.5 2.5 53 221-273 511-574 (697)
250 PRK05282 (alpha)-aspartyl dipe 40.9 1.5E+02 0.0032 29.6 8.6 92 160-252 30-130 (233)
251 COG2240 PdxK Pyridoxal/pyridox 40.4 87 0.0019 32.0 6.9 65 166-242 10-82 (281)
252 KOG1532 GTPase XAB1, interacts 40.1 39 0.00083 34.5 4.2 42 158-199 15-56 (366)
253 TIGR03709 PPK2_rel_1 polyphosp 38.8 33 0.00071 34.8 3.6 39 159-197 53-91 (264)
254 KOG1283 Serine carboxypeptidas 38.6 2.3E+02 0.0049 29.7 9.4 93 159-254 29-142 (414)
255 COG1073 Hydrolases of the alph 38.1 2.2 4.7E-05 42.6 -5.1 95 159-256 47-154 (299)
256 cd03146 GAT1_Peptidase_E Type 37.0 2E+02 0.0042 28.0 8.7 85 160-250 30-129 (212)
257 PRK00889 adenylylsulfate kinas 36.1 69 0.0015 29.7 5.3 37 162-198 4-40 (175)
258 TIGR03707 PPK2_P_aer polyphosp 34.9 41 0.00089 33.4 3.6 75 159-248 28-103 (230)
259 PF01580 FtsK_SpoIIIE: FtsK/Sp 34.8 1.2E+02 0.0027 28.8 6.9 65 165-229 41-113 (205)
260 KOG2170 ATPase of the AAA+ sup 34.4 56 0.0012 33.8 4.4 32 158-190 106-138 (344)
261 PRK10751 molybdopterin-guanine 34.4 76 0.0016 30.0 5.1 43 161-203 5-47 (173)
262 cd05312 NAD_bind_1_malic_enz N 34.0 31 0.00067 35.3 2.6 82 164-252 27-124 (279)
263 COG1087 GalE UDP-glucose 4-epi 33.9 72 0.0016 33.0 5.1 85 180-269 14-118 (329)
264 PRK07933 thymidylate kinase; V 33.3 83 0.0018 30.6 5.4 42 164-205 2-43 (213)
265 TIGR00176 mobB molybdopterin-g 33.1 66 0.0014 29.7 4.5 38 165-202 2-39 (155)
266 PF05577 Peptidase_S28: Serine 32.8 62 0.0013 35.1 4.9 44 358-405 377-420 (434)
267 cd04951 GT1_WbdM_like This fam 32.3 2.3E+02 0.0049 28.8 8.9 38 163-200 2-39 (360)
268 COG1763 MobB Molybdopterin-gua 30.7 82 0.0018 29.5 4.6 40 163-202 3-42 (161)
269 cd01841 NnaC_like NnaC (CMP-Ne 30.7 2.1E+02 0.0045 26.1 7.6 75 162-240 23-97 (174)
270 cd01983 Fer4_NifH The Fer4_Nif 29.9 81 0.0018 25.1 4.2 32 166-197 3-34 (99)
271 TIGR02069 cyanophycinase cyano 29.1 2.2E+02 0.0047 28.6 7.7 91 160-252 27-133 (250)
272 CHL00175 minD septum-site dete 28.3 1.1E+02 0.0024 30.9 5.6 39 161-199 15-53 (281)
273 COG4287 PqaA PhoPQ-activated p 27.3 1.7E+02 0.0036 31.2 6.5 66 353-425 325-390 (507)
274 PF03976 PPK2: Polyphosphate k 26.8 27 0.00058 34.6 0.7 40 160-199 29-68 (228)
275 PF10081 Abhydrolase_9: Alpha/ 26.6 2.5E+02 0.0054 28.8 7.5 86 181-273 52-149 (289)
276 PF12242 Eno-Rase_NADH_b: NAD( 26.6 88 0.0019 25.5 3.4 43 215-257 18-63 (78)
277 PF10605 3HBOH: 3HB-oligomer h 26.6 76 0.0016 35.8 4.1 49 354-402 551-607 (690)
278 PF01656 CbiA: CobQ/CobB/MinD/ 26.5 92 0.002 29.0 4.4 34 166-199 3-36 (195)
279 cd01523 RHOD_Lact_B Member of 25.7 1.1E+02 0.0025 25.2 4.3 34 159-200 60-93 (100)
280 cd04502 SGNH_hydrolase_like_7 25.1 2.1E+02 0.0046 26.1 6.5 75 163-241 23-97 (171)
281 PRK03846 adenylylsulfate kinas 25.1 1.2E+02 0.0027 28.8 5.0 40 159-198 21-60 (198)
282 PF08484 Methyltransf_14: C-me 24.9 1.5E+02 0.0032 27.6 5.3 44 218-265 55-98 (160)
283 PF04084 ORC2: Origin recognit 24.5 3.2E+02 0.0069 28.7 8.2 100 165-269 57-177 (326)
284 TIGR01425 SRP54_euk signal rec 24.2 1.2E+02 0.0026 33.1 5.1 39 160-198 98-136 (429)
285 PF05576 Peptidase_S37: PS-10 24.1 85 0.0018 33.9 3.8 64 353-419 347-411 (448)
286 COG0552 FtsY Signal recognitio 24.0 4.7E+02 0.01 27.6 9.1 93 166-267 198-292 (340)
287 PRK10824 glutaredoxin-4; Provi 23.9 4.3E+02 0.0093 23.2 7.7 83 159-257 13-95 (115)
288 COG4088 Predicted nucleotide k 23.8 82 0.0018 30.9 3.3 35 164-198 3-37 (261)
289 KOG1610 Corticosteroid 11-beta 23.1 2.5E+02 0.0055 29.2 6.9 68 164-235 31-106 (322)
290 PF09419 PGP_phosphatase: Mito 22.4 2.2E+02 0.0047 26.8 5.9 54 185-244 35-88 (168)
291 PF11713 Peptidase_C80: Peptid 22.3 39 0.00084 31.5 0.8 48 198-246 61-116 (157)
292 PLN02213 sinapoylglucose-malat 22.0 1.3E+02 0.0029 31.2 4.9 59 357-420 233-315 (319)
293 TIGR03371 cellulose_yhjQ cellu 21.6 1.5E+02 0.0032 29.0 4.9 40 163-202 3-42 (246)
294 cd02036 MinD Bacterial cell di 21.6 1.5E+02 0.0032 27.2 4.7 35 165-199 3-37 (179)
295 PF01935 DUF87: Domain of unkn 21.6 1.3E+02 0.0027 29.3 4.4 35 166-200 27-62 (229)
296 PF13721 SecD-TM1: SecD export 21.4 69 0.0015 27.4 2.1 25 29-53 3-27 (101)
297 KOG3491 Predicted membrane pro 21.2 85 0.0018 23.9 2.2 22 541-566 39-60 (65)
298 PRK13768 GTPase; Provisional 21.2 1.4E+02 0.003 30.0 4.6 36 163-198 3-38 (253)
299 TIGR00455 apsK adenylylsulfate 21.1 6.7E+02 0.014 23.2 10.0 39 160-198 16-54 (184)
300 PRK13230 nitrogenase reductase 21.0 1.5E+02 0.0032 30.0 4.9 41 163-204 3-43 (279)
301 TIGR03063 srtB_target sortase 20.7 47 0.001 21.7 0.7 11 555-565 17-27 (29)
302 cd03811 GT1_WabH_like This fam 20.6 8E+02 0.017 24.0 10.8 39 163-201 2-40 (353)
303 cd02067 B12-binding B12 bindin 20.4 4E+02 0.0086 22.8 6.9 33 163-197 2-34 (119)
304 PF14606 Lipase_GDSL_3: GDSL-l 20.2 1.9E+02 0.0041 27.6 5.0 27 215-241 75-101 (178)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=3.1e-69 Score=556.28 Aligned_cols=393 Identities=42% Similarity=0.745 Sum_probs=356.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHHhheeeeeeeeccccccccCCCCcEEEeCCCchhhHHHhhccccccCCcccCCCCCc
Q 008049 22 LLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSS 101 (579)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~cp~l~~~y~p~~wl~~ 101 (579)
++++.....++..+.+.+++.+..++|.+.++++. .+++.+++. +++|.++++++||.|+++|.|++|+++
T Consensus 4 l~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~l~~~-~~~f~~~l~~~~~~l~~~y~p~~w~~~ 74 (409)
T KOG1838|consen 4 LLFQSLLGPVLSPVLLGLLIGVAVVLYAFLYLKSP--------PRKPSLFCG-DSGFARFLVPKCPLLEEKYLPTLWLFS 74 (409)
T ss_pred ccccccccccccHHHHHHhhhhheeeeecceeecc--------CCCCeeecC-chHHHHHHHhhccccccccccceeecC
Confidence 45555556667777887777788888999998862 456656655 589999999999999999999999999
Q ss_pred chhHhhhhhhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH
Q 008049 102 PHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH 181 (579)
Q Consensus 102 ghlQT~~~~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~ 181 (579)
||+||++.++++++|.+.|+|++++++|||++++||+.+++.. ....+++.|+||++||++|+|.+.|+++
T Consensus 75 ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~---------~~~~~~~~P~vvilpGltg~S~~~YVr~ 145 (409)
T KOG1838|consen 75 GHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSR---------CRTDDGTDPIVVILPGLTGGSHESYVRH 145 (409)
T ss_pred CeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCcccc---------cCCCCCCCcEEEEecCCCCCChhHHHHH
Confidence 9999999999999999999999999999999999999876532 0012367799999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCc
Q 008049 182 LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPV 261 (579)
Q Consensus 182 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v 261 (579)
++..++++||+|+++|+||||+++.+++++|++++++|+.+++++++++||.+|++++|+||||+++++|+++.++++++
T Consensus 146 lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l 225 (409)
T KOG1838|consen 146 LVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPL 225 (409)
T ss_pred HHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcc-ccccccChhHhhccCCHHHHHhhhhcccCCCCCH
Q 008049 262 AGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV 340 (579)
Q Consensus 262 ~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~ 340 (579)
.+++++|.|||.....+.+.+...+++|++.++.++++++..+++ .+....+++.+.+.++++|||+.++++.+||++.
T Consensus 226 ~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~ 305 (409)
T KOG1838|consen 226 IAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSV 305 (409)
T ss_pred eeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcH
Confidence 999999999999888888888889999999999999999999888 5666788999999999999999999999999999
Q ss_pred HHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcc-cHHHHHHHHH
Q 008049 341 DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGM-WWVRAVNEYL 419 (579)
Q Consensus 341 ~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~-w~~~~v~eFL 419 (579)
++||+++|+.+++++|++|+|+|++.|||++|++.+|...+..||++.++++.+|||+||+||+.|... |+.+.+.||+
T Consensus 306 deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~ 385 (409)
T KOG1838|consen 306 DEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFL 385 (409)
T ss_pred HHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999776554 6666699999
Q ss_pred HhhcCCCcccccc
Q 008049 420 GVLHSSPYMHVRK 432 (579)
Q Consensus 420 ~~~~~~~~~~~~~ 432 (579)
..+.........+
T Consensus 386 ~~~~~~~~~~~~~ 398 (409)
T KOG1838|consen 386 GNAIFQDEVGRHR 398 (409)
T ss_pred HHHHhhhcccccC
Confidence 9987766655443
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=4.1e-54 Score=429.17 Aligned_cols=318 Identities=33% Similarity=0.551 Sum_probs=288.4
Q ss_pred Cccc-CCCCCcchhHhhhh--hhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEEC
Q 008049 92 RYLV-TPWLSSPHIQTAFL--HFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIP 168 (579)
Q Consensus 92 ~y~p-~~wl~~ghlQT~~~--~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllH 168 (579)
+|.| ++|++|||+||++. ..+++.+.+.|+||.+.++||+.+.+||..++. +..+|.||++|
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~---------------~~~~P~vVl~H 82 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR---------------AAKKPLVVLFH 82 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc---------------ccCCceEEEEe
Confidence 4777 78999999999998 567788899999999999999999999998633 25679999999
Q ss_pred CCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHH
Q 008049 169 GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANIL 248 (579)
Q Consensus 169 Gl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ia 248 (579)
|++|++.+.|++.+++.+.++||.+|++|.|||+++..+++++|+.++++|+..++++++++++..|+.+||+|+||+++
T Consensus 83 GL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmL 162 (345)
T COG0429 83 GLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNML 162 (345)
T ss_pred ccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccc--cC-hhHhhccCCHHH
Q 008049 249 VKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRL--AN-WEGIKKSRSIRD 325 (579)
Q Consensus 249 l~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~d-~~~i~~~~sl~e 325 (579)
++|+++.++++++.+++++|.|+|+..+...+...+..++|++.+.+.|++.+..+...+... .+ .+.+++.+++++
T Consensus 163 a~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~e 242 (345)
T COG0429 163 ANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIRE 242 (345)
T ss_pred HHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHh
Confidence 999999999999999999999999998888888776558999999999988887766555221 22 567888999999
Q ss_pred HHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccc
Q 008049 326 FDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLT 405 (579)
Q Consensus 326 fd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~ 405 (579)
||+.+|.+.+||.++++||+++|+...+++|++|+|+||+.|||+++++.+|...+..+|++.+.++++|||+||+.+..
T Consensus 243 FD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~ 322 (345)
T COG0429 243 FDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKL 322 (345)
T ss_pred ccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCcc
Confidence 99999999999999999999999999999999999999999999999999998777799999999999999999999733
Q ss_pred cCc-ccHHHHHHHHHHhhcC
Q 008049 406 AAG-MWWVRAVNEYLGVLHS 424 (579)
Q Consensus 406 ~~~-~w~~~~v~eFL~~~~~ 424 (579)
.++ .|..+++.+||+.+.+
T Consensus 323 ~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 323 LHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ccchhhHHHHHHHHHHHHHh
Confidence 333 3999999999998754
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=5.3e-51 Score=435.26 Aligned_cols=345 Identities=37% Similarity=0.661 Sum_probs=287.7
Q ss_pred cEEEeCCCchhhHHHhhccccccCCcccCCCCCcchhHhhhhhhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCC
Q 008049 68 VRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGD 147 (579)
Q Consensus 68 ~~l~~~~~~~~~~~i~~~cp~l~~~y~p~~wl~~ghlQT~~~~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~ 147 (579)
++.++.+....+++++++||+|.++|.|++|++|||+||++..++++.+.+.|+|+.+.++||+++.+||+.+....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~~--- 95 (388)
T PLN02511 19 EHSSLEVIGGGRDSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDRA--- 95 (388)
T ss_pred CccceeeccchHHHHHHhhhhhcCCccCCccCCCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCccccc---
Confidence 33444444455899999999999999999999999999999999988888999999999999999999998643211
Q ss_pred ccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 008049 148 VFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYL 227 (579)
Q Consensus 148 ~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l 227 (579)
.++++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+.+.++.+..++++|+.++++++
T Consensus 96 ---------~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l 166 (388)
T PLN02511 96 ---------LPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHV 166 (388)
T ss_pred ---------CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHH
Confidence 12567999999999998887788888888889999999999999999988777888889999999999999
Q ss_pred HHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccc
Q 008049 228 HHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR 307 (579)
Q Consensus 228 ~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~ 307 (579)
+.++|..+++++||||||+++++|++++++..+|.+++++++|+++......+... ...+|+..+...+++....+...
T Consensus 167 ~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~~~~l~~~~~~~~~~ 245 (388)
T PLN02511 167 AGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKALAKALRKIFAKHALL 245 (388)
T ss_pred HHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999889999999999999999999999855699999999999875444434333 23566666666666554433222
Q ss_pred cc---cccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcC
Q 008049 308 YS---RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 384 (579)
Q Consensus 308 ~~---~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~ 384 (579)
+. ...+...+.+.+++.+|++.++.+..+|.+.++||+..++...+++|++|+|+|+|+||+++|.+..+......+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~ 325 (388)
T PLN02511 246 FEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN 325 (388)
T ss_pred HhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC
Confidence 21 123455666778999999999999999999999999999999999999999999999999999887765566788
Q ss_pred CCEEEEEeCCCCcccccccccc--CcccHHHHHHHHHHhhcCC
Q 008049 385 KNVVLATTWHGGHLAFFEGLTA--AGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 385 ~~~~l~~~~~GGH~gfleg~~~--~~~w~~~~v~eFL~~~~~~ 425 (579)
++++++++++|||++|+|+... ...|+++.+.+||+.+.+.
T Consensus 326 p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 326 PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999999999999999997421 2359999999999998654
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=3.9e-45 Score=381.52 Aligned_cols=318 Identities=29% Similarity=0.456 Sum_probs=265.6
Q ss_pred CCcccCCCCCcchhHhhhhhhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCC
Q 008049 91 GRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGL 170 (579)
Q Consensus 91 ~~y~p~~wl~~ghlQT~~~~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl 170 (579)
.+|.||+|+.|||+||++..++++.+.++++|+.++++||+.+.++|...+.. ..++|+||++||+
T Consensus 2 ~~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~~--------------~~~~p~vll~HG~ 67 (324)
T PRK10985 2 AEFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPAQ--------------ARHKPRLVLFHGL 67 (324)
T ss_pred CCCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCcc--------------CCCCCEEEEeCCC
Confidence 46999999999999999999998888899999999999999999999754321 2457899999999
Q ss_pred CCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHH
Q 008049 171 TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVK 250 (579)
Q Consensus 171 ~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ 250 (579)
+|++.+.|+..++..|.++||+|+++|+||||+++...++.+..+.++|+.+++++++++++..+++++||||||++++.
T Consensus 68 ~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 68 EGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred CCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHH
Confidence 88877778888999999999999999999999987666667777889999999999999888889999999999999999
Q ss_pred HHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcccccc--ccChhHhhccCCHHHHHh
Q 008049 251 YLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR--LANWEGIKKSRSIRDFDS 328 (579)
Q Consensus 251 ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~d~~~i~~~~sl~efd~ 328 (579)
|+++++++.++.++|++++|+++..+...+...+ ..+|.+.+...+++........+.. ..+.+.+...+++++||+
T Consensus 148 ~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 226 (324)
T PRK10985 148 LLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGF-SRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDD 226 (324)
T ss_pred HHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhh
Confidence 9999877546999999999999876655554432 4466666666555443322222221 235566778899999999
Q ss_pred hhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccc-cC
Q 008049 329 HATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLT-AA 407 (579)
Q Consensus 329 ~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~-~~ 407 (579)
.++.+..||.+..+||...+....+++|++|+|+|+|++|++++.+..+. .....+++.++++++|||++|+||.. ..
T Consensus 227 ~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~g~~~~~ 305 (324)
T PRK10985 227 LITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGFVGGTLLKP 305 (324)
T ss_pred hheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceeeCCCCCCCC
Confidence 99999999999999999999889999999999999999999999876655 34667899999999999999999853 24
Q ss_pred cccHHHHHHHHHHhhcC
Q 008049 408 GMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 408 ~~w~~~~v~eFL~~~~~ 424 (579)
..|+++.+.+|++.+.+
T Consensus 306 ~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 306 QMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CccHHHHHHHHHHHhhc
Confidence 57999999999987653
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=1.8e-24 Score=226.18 Aligned_cols=281 Identities=14% Similarity=0.084 Sum_probs=169.5
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEE
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 196 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 196 (579)
.++++++.++..||..+.+..+.+++. .+.+++||++||++++. .++...++..|+++||+|+++
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~--------------~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS--------------SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFAL 93 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC--------------CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEe
Confidence 367788899999999998865544221 13468899999995443 333467788899999999999
Q ss_pred cCCCCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHH--CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 197 NHRGLGGVSITSDCFY-NAGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 197 D~RG~G~S~~~~~~~~-~~~~~eDl~~~l~~l~~~--~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
|+||||.|+....... .....+|+.+++++++.. ++..+++++||||||++++.++.++|+ +++++|++++....
T Consensus 94 D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~ 171 (330)
T PLN02298 94 DLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKI 171 (330)
T ss_pred cCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccC
Confidence 9999999864322111 123568999999999864 345689999999999999999999887 79999999886543
Q ss_pred hhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCC---C---HHHHHHhC
Q 008049 274 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE---T---VDTYYRNC 347 (579)
Q Consensus 274 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~---s---~~~yy~~~ 347 (579)
..... ....... ....+..+..... .....+. +...................+. . ..+..+..
T Consensus 172 ~~~~~--~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (330)
T PLN02298 172 SDKIR--PPWPIPQ-----ILTFVARFLPTLA--IVPTADL--LEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT 240 (330)
T ss_pred CcccC--CchHHHH-----HHHHHHHHCCCCc--cccCCCc--ccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH
Confidence 22100 0000000 0000111110000 0000000 0000000000000000000111 0 11111111
Q ss_pred C-cccccCCCcccEEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 348 S-SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 348 s-~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
. ....+.+|++|+|+|+|++|+++|++........ ..+++++.+++++||..+++........+.+.+.+||++....
T Consensus 241 ~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 241 DYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 0 1245788999999999999999998865443222 3467899999999999988742111235778899999887543
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=2.4e-23 Score=211.58 Aligned_cols=263 Identities=13% Similarity=0.090 Sum_probs=162.2
Q ss_pred EEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q 008049 124 LFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 203 (579)
Q Consensus 124 ~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 203 (579)
++..+||..+.+.++.|.+ ..+++|+++||++ ++...| ..++..|+++||+|+++|+||||.
T Consensus 4 ~~~~~~g~~l~~~~~~~~~----------------~~~~~v~llHG~~-~~~~~~-~~~~~~l~~~g~~via~D~~G~G~ 65 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT----------------YPKALVFISHGAG-EHSGRY-EELAENISSLGILVFSHDHIGHGR 65 (276)
T ss_pred eeecCCCCEEEEEeccCCC----------------CCCEEEEEeCCCc-cccchH-HHHHHHHHhCCCEEEEccCCCCCC
Confidence 4567899999988776531 3457888889995 444445 789999999999999999999999
Q ss_pred CCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhh
Q 008049 204 VSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGR 282 (579)
Q Consensus 204 S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~ 282 (579)
|+........ ..+.+|+.+.+++++..++..+++++||||||++++.++..+++ .++++|+++++.+....
T Consensus 66 S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~------ 137 (276)
T PHA02857 66 SNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAV------ 137 (276)
T ss_pred CCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccc------
Confidence 8753211111 23457888888887777777899999999999999999999888 79999999986542110
Q ss_pred hHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccC--CCCC---HHHHHHh-CCcccccCCC
Q 008049 283 RLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG--KFET---VDTYYRN-CSSSTYVGNV 356 (579)
Q Consensus 283 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~--g~~s---~~~yy~~-~s~~~~l~~I 356 (579)
.. ...+...+ ...... .... .......+ .+...+.......+.. .... ....... ......+.+|
T Consensus 138 ~~-~~~~~~~~----~~~~~~-~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 208 (276)
T PHA02857 138 PR-LNLLAAKL----MGIFYP-NKIV-GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKI 208 (276)
T ss_pred cH-HHHHHHHH----HHHhCC-CCcc-CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccC
Confidence 00 00000000 000000 0000 00000000 0111111111000000 0000 0111111 1123467889
Q ss_pred cccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 357 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 357 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
++|+|+|+|++|.++|++..........+++++.+++++||..+.|.. +.+..+.+.+.+||+..
T Consensus 209 ~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 209 KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 999999999999999988665544444457899999999999998831 11234667788898764
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=1.2e-23 Score=221.89 Aligned_cols=252 Identities=13% Similarity=0.095 Sum_probs=149.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHH--CCCCc
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~--~p~~~ 235 (579)
+.+|+|||+||+++ +...|+..++..|+++||+|+++|+||||.|+........ ..+.+|+.++++.+... ++..+
T Consensus 85 ~~~~~iv~lHG~~~-~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~ 163 (349)
T PLN02385 85 RPKAAVCFCHGYGD-TCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLP 163 (349)
T ss_pred CCCeEEEEECCCCC-ccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 45689999999954 4344557889999999999999999999999754222111 24567888888887653 34568
Q ss_pred EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChh
Q 008049 236 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 315 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~ 315 (579)
++++||||||++++.++.++|+ .+.++|++++........ ........+.. .+....... ..........
T Consensus 164 ~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~--~~~~~~~~~~~-----~~~~~~p~~-~~~~~~~~~~ 233 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDV--VPPPLVLQILI-----LLANLLPKA-KLVPQKDLAE 233 (349)
T ss_pred EEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccc--cCchHHHHHHH-----HHHHHCCCc-eecCCCcccc
Confidence 9999999999999999999998 899999998765432110 00000011110 011110000 0000000000
Q ss_pred HhhccCCHHHHHhhh---hcccCCCCCHHHHHHhC-CcccccCCCcccEEEEEeCCCCCCCCCCcchHHHh-cCCCEEEE
Q 008049 316 GIKKSRSIRDFDSHA---TCLVGKFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLA 390 (579)
Q Consensus 316 ~i~~~~sl~efd~~~---t~~~~g~~s~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~ 390 (579)
.........+..... ...........+.++.. .....+.+|++|+|+|+|++|.++|++........ .++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~ 313 (349)
T PLN02385 234 LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLK 313 (349)
T ss_pred ccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEE
Confidence 000000000000000 00000111112222221 12345788999999999999999998765443222 24678999
Q ss_pred EeCCCCccccccccccCc--ccHHHHHHHHHHhhc
Q 008049 391 TTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVLH 423 (579)
Q Consensus 391 ~~~~GGH~gfleg~~~~~--~w~~~~v~eFL~~~~ 423 (579)
+++++||..+.|. ++. .-+.+.+.+||++..
T Consensus 314 ~i~~~gH~l~~e~--p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 314 LYEDAYHSILEGE--PDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EeCCCeeecccCC--ChhhHHHHHHHHHHHHHHhc
Confidence 9999999988773 322 126678899998764
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.89 E-value=8.5e-22 Score=202.72 Aligned_cols=273 Identities=18% Similarity=0.159 Sum_probs=175.0
Q ss_pred CceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 119 SYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 119 ~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
...++.+...||..+.+.-+.+.. +.+.+||++||+ +.+...| ..++..|..+||.|+++|+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~----------------~~~g~Vvl~HG~-~Eh~~ry-~~la~~l~~~G~~V~~~D~ 69 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE----------------PPKGVVVLVHGL-GEHSGRY-EELADDLAARGFDVYALDL 69 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC----------------CCCcEEEEecCc-hHHHHHH-HHHHHHHHhCCCEEEEecC
Confidence 345677888999999877654422 223789999999 5566677 7899999999999999999
Q ss_pred CCCCCCC-CCCCCCC-CCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhh
Q 008049 199 RGLGGVS-ITSDCFY-NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 276 (579)
Q Consensus 199 RG~G~S~-~~~~~~~-~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~ 276 (579)
||||.|. ......- ...+.+|+.++++.+...++..|++++||||||.|++.|+.+++. +|+++|+.+|.+.+..
T Consensus 70 RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~- 146 (298)
T COG2267 70 RGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGG- 146 (298)
T ss_pred CCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCCh-
Confidence 9999997 2222111 134568999999999888888999999999999999999999996 8999999988776653
Q ss_pred hHHHhhhHHHHHHHHHHHHhHHHHHhhh--ccccccccChhHhhccCCHHHHHhhhhccc--CCCC---CHHHHHHhCC-
Q 008049 277 DRFIGRRLIQKIYDRALTIGLQDYAQLH--EPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFE---TVDTYYRNCS- 348 (579)
Q Consensus 277 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~--~~~~~~~~d~~~i~~~~sl~efd~~~t~~~--~g~~---s~~~yy~~~s- 348 (579)
.... ..........+.+..... ............ ..+.....+.....+. .+.. .+..+.....
T Consensus 147 --~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~ 218 (298)
T COG2267 147 --AILR----LILARLALKLLGRIRPKLPVDSNLLEGVLTDD--LSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV 218 (298)
T ss_pred --hHHH----HHHHHHhcccccccccccccCcccccCcCcch--hhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc
Confidence 0000 000111111111110000 000000000000 0122222222222221 1211 2233333333
Q ss_pred -cccccCCCcccEEEEEeCCCCCCC-CCCcc-hHHHhcCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHhhc
Q 008049 349 -SSTYVGNVSIPLLCISSLDDPVCT-VEAIP-WDECRANKNVVLATTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVLH 423 (579)
Q Consensus 349 -~~~~l~~I~vPvLiI~g~dDpivp-~~~~~-~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~--~w~~~~v~eFL~~~~ 423 (579)
.......+++|+|+++|++|++++ .+... .......+++++.+++++.|-.+.| ++. .-+.+.+.+|+....
T Consensus 219 ~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E---~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 219 PALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNE---PDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcC---cchHHHHHHHHHHHHHHhhc
Confidence 334567889999999999999999 45433 3355677889999999999999999 333 345667777776543
No 9
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=5.3e-21 Score=204.22 Aligned_cols=271 Identities=17% Similarity=0.159 Sum_probs=165.0
Q ss_pred ceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 120 YRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 120 y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
+....+..+||..+.+..+.|.. .+.+++||++||+++ +...| ..++..|+++||+|+++|+|
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~---------------~~~~~~Vl~lHG~~~-~~~~~-~~~a~~L~~~Gy~V~~~D~r 172 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA---------------GEMRGILIIIHGLNE-HSGRY-LHFAKQLTSCGFGVYAMDWI 172 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC---------------CCCceEEEEECCchH-HHHHH-HHHHHHHHHCCCEEEEeCCC
Confidence 44455667777777666554422 134678999999954 44445 78999999999999999999
Q ss_pred CCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCC-CCCccEEEEEcCCcChhhhh
Q 008049 200 GLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLLIGD 277 (579)
Q Consensus 200 G~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~-~~~v~a~V~is~p~d~~~~~ 277 (579)
|||.|+........ ....+|+.++++++...++..+++++||||||.+++.++. +++ ...+.++|+.++...+....
T Consensus 173 GhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~ 251 (395)
T PLN02652 173 GHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH 251 (395)
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch
Confidence 99999764322222 2346899999999998888779999999999999997764 443 12689999988765443211
Q ss_pred HHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhccc--CCCCCHH---HHHHhCC-ccc
Q 008049 278 RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFETVD---TYYRNCS-SST 351 (579)
Q Consensus 278 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~--~g~~s~~---~yy~~~s-~~~ 351 (579)
. +.. ....+... ..+.. .+.. .+...+............+..+. .+..... +.++... ...
T Consensus 252 ~-~~~-~~~~l~~~--------~~p~~--~~~~-~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~ 318 (395)
T PLN02652 252 P-IVG-AVAPIFSL--------VAPRF--QFKG-ANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTR 318 (395)
T ss_pred H-HHH-HHHHHHHH--------hCCCC--cccC-cccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHh
Confidence 1 000 00111110 00000 0000 00000000011111111111110 1111111 1111111 134
Q ss_pred ccCCCcccEEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 352 YVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 352 ~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
.+.+|++|+|+++|++|.++|++........ .++++++.++++++|..++| +.+..+.+.+.+||+...+
T Consensus 319 ~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 319 NFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred hcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 6788999999999999999998765543333 44567899999999999887 3445688899999987653
No 10
>PRK10749 lysophospholipase L2; Provisional
Probab=99.88 E-value=8.6e-22 Score=206.18 Aligned_cols=285 Identities=15% Similarity=0.126 Sum_probs=164.7
Q ss_pred hhHhhhhhhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH
Q 008049 103 HIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL 182 (579)
Q Consensus 103 hlQT~~~~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l 182 (579)
..|+....++. ..+...+...||..+.+..+.++ +.+++||++||++ ++...| ..+
T Consensus 18 ~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~-----------------~~~~~vll~HG~~-~~~~~y-~~~ 73 (330)
T PRK10749 18 FTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAP-----------------HHDRVVVICPGRI-ESYVKY-AEL 73 (330)
T ss_pred HHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCC-----------------CCCcEEEEECCcc-chHHHH-HHH
Confidence 45666555542 23445667788988876654331 2346899999995 444456 678
Q ss_pred HHHHHhCCCeEEEEcCCCCCCCCCCCCC-----CC-CCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcC
Q 008049 183 VFNTAKRGWNVVVSNHRGLGGVSITSDC-----FY-NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 256 (579)
Q Consensus 183 ~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-----~~-~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~ 256 (579)
+..++++||+|+++|+||||.|+..... .+ ...+.+|+.++++.+...++..+++++||||||.+++.++.+++
T Consensus 74 ~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p 153 (330)
T PRK10749 74 AYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHP 153 (330)
T ss_pred HHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCC
Confidence 8889999999999999999999643221 11 12456788888888776667789999999999999999999998
Q ss_pred CCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhc---cccccc-cChhHhhccCCHH---HHHhh
Q 008049 257 EKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE---PRYSRL-ANWEGIKKSRSIR---DFDSH 329 (579)
Q Consensus 257 ~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~---~~~~~~-~d~~~i~~~~sl~---efd~~ 329 (579)
+ .++++|++++......... ......+... +. .......... ...... ...+.+ ..... ++.+.
T Consensus 154 ~--~v~~lvl~~p~~~~~~~~~---~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~ 224 (330)
T PRK10749 154 G--VFDAIALCAPMFGIVLPLP---SWMARRILNW-AE-GHPRIRDGYAIGTGRWRPLPFAINVL--THSRERYRRNLRF 224 (330)
T ss_pred C--CcceEEEECchhccCCCCC---cHHHHHHHHH-HH-HhcCCCCcCCCCCCCCCCCCcCCCCC--CCCHHHHHHHHHH
Confidence 8 7999999987643211100 0000111110 00 0000000000 000000 000000 00000 11111
Q ss_pred h-hccc--CCCCC---HHHHHHh-CCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHh------cCCCEEEEEeCCCC
Q 008049 330 A-TCLV--GKFET---VDTYYRN-CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR------ANKNVVLATTWHGG 396 (579)
Q Consensus 330 ~-t~~~--~g~~s---~~~yy~~-~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~------~~~~~~l~~~~~GG 396 (579)
+ ..+. .+... ..+.+.. ......+.++++|+|+|+|++|++++++........ ..+++++++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gag 304 (330)
T PRK10749 225 YADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAY 304 (330)
T ss_pred HHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCc
Confidence 1 1110 00011 1111111 112345788999999999999999998754332111 12567899999999
Q ss_pred ccccccccccCcccHHHHHHHHHHh
Q 008049 397 HLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 397 H~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
|..+.|... .+.-+.+.+.+||+.
T Consensus 305 H~~~~E~~~-~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 305 HEILFEKDA-MRSVALNAIVDFFNR 328 (330)
T ss_pred chhhhCCcH-HHHHHHHHHHHHHhh
Confidence 999988311 123456778888865
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=9.8e-22 Score=202.83 Aligned_cols=268 Identities=15% Similarity=0.084 Sum_probs=150.1
Q ss_pred CCCCCceEEEEEcCC--CcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCe
Q 008049 115 PPCFSYRRQLFRLSD--GGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN 192 (579)
Q Consensus 115 ~~~~~y~r~~l~~~D--Gg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~ 192 (579)
.+.+++....+...+ |+.+.+.+... + ++++|+|||+||+++ +...| ..++..|.+.||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~-G---------------~~~~~~lvliHG~~~-~~~~w-~~~~~~L~~~gy~ 75 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDE-G---------------PADGPPVLLLHGEPS-WSYLY-RKMIPILAAAGHR 75 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEec-C---------------CCCCCEEEEECCCCC-chhhH-HHHHHHHHhCCCE
Confidence 445556666666654 56555554432 1 124578999999954 44445 7889999888999
Q ss_pred EEEEcCCCCCCCCCCCC-CCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 193 VVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 193 Vvv~D~RG~G~S~~~~~-~~~~-~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
|+++|+||||.|+.... ..++ ....+|+.++++.+ +..+++++||||||.+++.++.++|+ +|.++|++++.
T Consensus 76 vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 149 (302)
T PRK00870 76 VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTG 149 (302)
T ss_pred EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCC
Confidence 99999999999965322 1122 22334555555443 44589999999999999999999988 89999999864
Q ss_pred cChhhh--hHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhcc----------CCHHHHHhhhhcccCCCC
Q 008049 271 WDLLIG--DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS----------RSIRDFDSHATCLVGKFE 338 (579)
Q Consensus 271 ~d~~~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~----------~sl~efd~~~t~~~~g~~ 338 (579)
...... ..... .+. .+....-...+....... .......+..... .....+.... ..+..
T Consensus 150 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 221 (302)
T PRK00870 150 LPTGDGPMPDAFW-AWR-AFSQYSPVLPVGRLVNGG---TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLV---PTSPD 221 (302)
T ss_pred CCCccccchHHHh-hhh-cccccCchhhHHHHhhcc---ccccCCHHHHHHhhcccCChhhhcchhhhhhcC---CCCCC
Confidence 321110 00000 000 000000000000000000 0000000000000 0000000000 00000
Q ss_pred C-HHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEE---EEEeCCCCccccccccccCcccHHHH
Q 008049 339 T-VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV---LATTWHGGHLAFFEGLTAAGMWWVRA 414 (579)
Q Consensus 339 s-~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~---l~~~~~GGH~gfleg~~~~~~w~~~~ 414 (579)
. ...... .....+.+|++|+|+|+|++|+++|... .......++.. +++++++||+.++|. + ..+.+.
T Consensus 222 ~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~ 293 (302)
T PRK00870 222 DPAVAANR--AAWAVLERWDKPFLTAFSDSDPITGGGD--AILQKRIPGAAGQPHPTIKGAGHFLQEDS--G--EELAEA 293 (302)
T ss_pred CcchHHHH--HHHHhhhcCCCceEEEecCCCCcccCch--HHHHhhcccccccceeeecCCCccchhhC--h--HHHHHH
Confidence 0 000000 0113568899999999999999999765 33555566655 889999999999883 3 358899
Q ss_pred HHHHHHhh
Q 008049 415 VNEYLGVL 422 (579)
Q Consensus 415 v~eFL~~~ 422 (579)
+.+|++..
T Consensus 294 l~~fl~~~ 301 (302)
T PRK00870 294 VLEFIRAT 301 (302)
T ss_pred HHHHHhcC
Confidence 99998653
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.88 E-value=1.3e-21 Score=199.30 Aligned_cols=245 Identities=15% Similarity=0.167 Sum_probs=145.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
.+.|||+||+++++ ..| ..+++.|.+ +|+|+++|+||||.|+..........+.+|+.++++++. ..+++++|
T Consensus 25 ~~plvllHG~~~~~-~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~LvG 97 (276)
T TIGR02240 25 LTPLLIFNGIGANL-ELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAIG 97 (276)
T ss_pred CCcEEEEeCCCcch-HHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEEE
Confidence 35689999995544 444 678888765 799999999999999754222222345567777777663 35799999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhh---HHHhhh-HHHHHHHHHHHHhHHHHHhhhccccccccChhH
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD---RFIGRR-LIQKIYDRALTIGLQDYAQLHEPRYSRLANWEG 316 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~---~~l~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~ 316 (579)
|||||.+++.++.++|+ +|+++|+++++....... ...... .......... ............+. .+.+
T Consensus 98 ~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~- 170 (276)
T TIGR02240 98 VSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSH--GIHIAPDIYGGAFR--RDPE- 170 (276)
T ss_pred ECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCchhhhcccc--ccchhhhhccceee--ccch-
Confidence 99999999999999998 899999999875421100 000000 0000000000 00000000000000 0000
Q ss_pred hhccCCHHHHHhhhhcccCCCCCHHHHHH--hCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008049 317 IKKSRSIRDFDSHATCLVGKFETVDTYYR--NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH 394 (579)
Q Consensus 317 i~~~~sl~efd~~~t~~~~g~~s~~~yy~--~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 394 (579)
....+.... ...........+.. .......+.+|++|+|+|+|++|+++|++.... .....++.+++++++
T Consensus 171 -----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~-l~~~~~~~~~~~i~~ 243 (276)
T TIGR02240 171 -----LAMAHASKV-RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL-LAWRIPNAELHIIDD 243 (276)
T ss_pred -----hhhhhhhhc-ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH-HHHhCCCCEEEEEcC
Confidence 000000000 00000000111111 111234578999999999999999999876544 456678899999975
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhcCCCccccc
Q 008049 395 GGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVR 431 (579)
Q Consensus 395 GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~~~~~~~ 431 (579)
||+.+.|. | ..+.+.+.+|++....-.++|.+
T Consensus 244 -gH~~~~e~--p--~~~~~~i~~fl~~~~~~~~~~~~ 275 (276)
T TIGR02240 244 -GHLFLITR--A--EAVAPIIMKFLAEERQRAVMHPR 275 (276)
T ss_pred -CCchhhcc--H--HHHHHHHHHHHHHhhhhccCCCC
Confidence 99999883 3 35999999999998777666643
No 13
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=1.4e-21 Score=193.74 Aligned_cols=280 Identities=13% Similarity=0.077 Sum_probs=176.6
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEE
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 196 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 196 (579)
.+.+....++.++|..+-..|+.|... ...+..|+++||+++.+...| ..++..|+..||.|+++
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~~--------------~~pr~lv~~~HG~g~~~s~~~-~~~a~~l~~~g~~v~a~ 88 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLSG--------------TEPRGLVFLCHGYGEHSSWRY-QSTAKRLAKSGFAVYAI 88 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCCC--------------CCCceEEEEEcCCcccchhhH-HHHHHHHHhCCCeEEEe
Confidence 456677788999998886555555332 145678999999966554455 88999999999999999
Q ss_pred cCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHH--HCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 197 NHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHH--EYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 197 D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~--~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
|++|||+|++....... ....+|+...++.++. .++..|.+++||||||.+++.++.++|. ..+|+|+++|.+..
T Consensus 89 D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 89 DYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKI 166 (313)
T ss_pred eccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeeccccc
Confidence 99999999876543332 2345888888888654 4677899999999999999999999887 78999999876544
Q ss_pred hhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCC---CCHHHHHHhCC-c
Q 008049 274 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTYYRNCS-S 349 (579)
Q Consensus 274 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~---~s~~~yy~~~s-~ 349 (579)
..... ..+.... +...+..+++.++ ..+.....+.+.+....++....--....|. ++..+..+... .
T Consensus 167 ~~~~k--p~p~v~~-----~l~~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~l 238 (313)
T KOG1455|consen 167 SEDTK--PHPPVIS-----ILTLLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADL 238 (313)
T ss_pred CCccC--CCcHHHH-----HHHHHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHH
Confidence 32110 0011111 1111222222222 1111000000000000011100000011222 23334443332 2
Q ss_pred ccccCCCcccEEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 350 STYVGNVSIPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 350 ~~~l~~I~vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
...++++++|++++||++|.++.++..... +...+.++.+.++|+.-|..+.-...++..-+-..|.+||++
T Consensus 239 e~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 239 EKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 357889999999999999999999866543 455678899999999999877622223333456778888875
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=3.4e-21 Score=197.81 Aligned_cols=242 Identities=15% Similarity=0.132 Sum_probs=139.6
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCC------CCC-CCcHHHHHHHHHHHHHHCCC
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC------FYN-AGWTEDAREVIGYLHHEYPK 233 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~------~~~-~~~~eDl~~~l~~l~~~~p~ 233 (579)
+|+|||+||+++++. .| +.++..|+++ |+|+++|+||||.|+...+. .|+ ..+.+|+.++++.+. .
T Consensus 29 ~~~vlllHG~~~~~~-~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~----~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD-HW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV----G 101 (294)
T ss_pred CCeEEEECCCCCChh-HH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc----C
Confidence 367999999965444 45 7888888875 69999999999999764321 122 234456666665553 4
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhh--hHHHhhhHHHHHHHHHHHHhH-HHHHhhh------
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTIGL-QDYAQLH------ 304 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~--~~~l~~~~~~~~~~~~l~~~l-~~~~~~~------ 304 (579)
.+++++||||||.+++.++.++|+ +|+++|+++++...... .....+.....+......... +.+....
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETV 179 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHH
Confidence 689999999999999999999998 89999999875422100 000001000000000000000 0000000
Q ss_pred cccccc-ccChhHhhccCCHHHHHhhhhcccCCCCCHHH---HHHhC---CcccccCCCcccEEEEEeCCCCCCCCCCcc
Q 008049 305 EPRYSR-LANWEGIKKSRSIRDFDSHATCLVGKFETVDT---YYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIP 377 (579)
Q Consensus 305 ~~~~~~-~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~---yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 377 (579)
...+.. ..+... .. .+....+............ ++... .....+++|++|+|+|+|++|+++|.+...
T Consensus 180 ~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 254 (294)
T PLN02824 180 KNILCQCYHDDSA----VT-DELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR 254 (294)
T ss_pred HHHHHHhccChhh----cc-HHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHH
Confidence 000000 000000 00 0000011000000000111 11000 112457889999999999999999987554
Q ss_pred hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 378 WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 378 ~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
. .....++.++++++++||+.++|. +..+.+.+.+|++.
T Consensus 255 ~-~~~~~~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fl~~ 293 (294)
T PLN02824 255 A-YANFDAVEDFIVLPGVGHCPQDEA----PELVNPLIESFVAR 293 (294)
T ss_pred H-HHhcCCccceEEeCCCCCChhhhC----HHHHHHHHHHHHhc
Confidence 4 555677789999999999999983 33599999999875
No 15
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=3.2e-21 Score=198.17 Aligned_cols=246 Identities=14% Similarity=0.094 Sum_probs=140.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
+|.||++||+.+ +...| +.+++.|++.+ +|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 27 g~~vvllHG~~~-~~~~w-~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~lvG 99 (295)
T PRK03592 27 GDPIVFLHGNPT-SSYLW-RNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG----LDDVVLVG 99 (295)
T ss_pred CCEEEEECCCCC-CHHHH-HHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCeEEEE
Confidence 367999999954 44445 78899998875 9999999999999765432222344566666666653 45899999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhH--------HHHHhhhc-cccccc
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL--------QDYAQLHE-PRYSRL 311 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l--------~~~~~~~~-~~~~~~ 311 (579)
|||||.+++.++..+|+ +|+++|+++++........ ..... ...+.......+ ..+..... ......
T Consensus 100 hS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (295)
T PRK03592 100 HDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMTWDD-FPPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRP 175 (295)
T ss_pred ECHHHHHHHHHHHhChh--heeEEEEECCCCCCcchhh-cchhH-HHHHHHHhCcccccccccchhhHHhhcccCccccc
Confidence 99999999999999998 8999999997432111000 00000 000000000000 00000000 000000
Q ss_pred cChhHh---h----ccCCHHHHHhhhh-cccCCCC-CHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHh
Q 008049 312 ANWEGI---K----KSRSIRDFDSHAT-CLVGKFE-TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR 382 (579)
Q Consensus 312 ~d~~~i---~----~~~sl~efd~~~t-~~~~g~~-s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~ 382 (579)
...+.+ . .......+..... ....++. ....... .....+.+|++|+|+|+|++|+++++.........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 253 (295)
T PRK03592 176 LSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVE--EYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRS 253 (295)
T ss_pred CCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhh--HhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHH
Confidence 000000 0 0000000000000 0000000 0000000 01234678999999999999999965544333445
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008049 383 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 423 (579)
Q Consensus 383 ~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~ 423 (579)
..++.++.+++++||+.++|. | ..+.+.+.+|+++..
T Consensus 254 ~~~~~~~~~i~~~gH~~~~e~--p--~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 254 WPNQLEITVFGAGLHFAQEDS--P--EEIGAAIAAWLRRLR 290 (295)
T ss_pred hhhhcceeeccCcchhhhhcC--H--HHHHHHHHHHHHHhc
Confidence 567899999999999999983 3 359999999998753
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.86 E-value=2.6e-20 Score=189.41 Aligned_cols=240 Identities=11% Similarity=0.053 Sum_probs=136.6
Q ss_pred CcEEEEECCCCCCCccHHH--HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCC-CCCCCcHHHHHHHHHHHHHHCCCCcEE
Q 008049 161 TPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-FYNAGWTEDAREVIGYLHHEYPKAPLF 237 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi--~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-~~~~~~~eDl~~~l~~l~~~~p~~~i~ 237 (579)
.|.||++||++++.. .|- ...+..+.+.||+|+++|+||||.|+..... .......+|+.++++.+ ...+++
T Consensus 30 ~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 367999999954433 231 1334567778999999999999999754221 11122456777766665 345899
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHH---HHHhHHHHHhhhcccccc-ccC
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSR-LAN 313 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~---l~~~l~~~~~~~~~~~~~-~~d 313 (579)
++||||||.+++.++.++|+ +++++|+++++..................+... ....+........ +.. ..+
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 180 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL--FDQSLIT 180 (282)
T ss_pred EEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc--cCcccCc
Confidence 99999999999999999988 899999998753211000000000000000000 0000111110000 000 000
Q ss_pred hhHhh-----ccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008049 314 WEGIK-----KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 388 (579)
Q Consensus 314 ~~~i~-----~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 388 (579)
..... .................. . +........+.+|++|+|+++|++|++++++.... .....++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~-~~~~~~~~~ 253 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKA--P----LSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLK-LLWNMPDAQ 253 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhcccc--c----cccchHHHHHhhCCCCEEEEEccCCCcCCchhHHH-HHHhCCCCE
Confidence 00000 000000000000000000 0 00001124578899999999999999999875544 556778999
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 389 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 389 l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
+++++++||+.+.|. +..+.+.+.+||+
T Consensus 254 ~~~i~~agH~~~~e~----p~~~~~~i~~fl~ 281 (282)
T TIGR03343 254 LHVFSRCGHWAQWEH----ADAFNRLVIDFLR 281 (282)
T ss_pred EEEeCCCCcCCcccC----HHHHHHHHHHHhh
Confidence 999999999999983 3358899999985
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.86 E-value=6.5e-21 Score=187.34 Aligned_cols=237 Identities=13% Similarity=0.163 Sum_probs=137.1
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 239 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lv 239 (579)
.+|+||++||+ |++...| +.+++.+. .||+|+++|+||||.|+..........+.+|+.++++. .+..+++++
T Consensus 12 ~~~~li~~hg~-~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~----~~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSL-GTDLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH----LGIERAVFC 84 (251)
T ss_pred CCCeEEEEcCc-ccchhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCceEEE
Confidence 56899999999 4455555 67777775 58999999999999986442221112233444444443 344589999
Q ss_pred EEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhh-hccccccccChhHhh
Q 008049 240 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQL-HEPRYSRLANWEGIK 318 (579)
Q Consensus 240 G~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~d~~~i~ 318 (579)
||||||.+++.++.++++ .++++|+++++........+... . ..+....+.......... ....+.. ...
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 155 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNAR-I-AAVRAEGLAALADAVLERWFTPGFRE-AHP---- 155 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHH-H-hhhhhccHHHHHHHHHHHHccccccc-CCh----
Confidence 999999999999999887 79999988865432211111100 0 000000000000000000 0000000 000
Q ss_pred ccCCHHHHHhhhhc-ccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008049 319 KSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 397 (579)
Q Consensus 319 ~~~sl~efd~~~t~-~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 397 (579)
.....+...... ...++......+........+.++++|+++++|++|+++|.+.... .....++.++..++++||
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH 232 (251)
T TIGR02427 156 --ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVRE-IADLVPGARFAEIRGAGH 232 (251)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHH-HHHhCCCceEEEECCCCC
Confidence 000011111100 0011111112222233345678899999999999999999875443 455568889999999999
Q ss_pred cccccccccCcccHHHHHHHHH
Q 008049 398 LAFFEGLTAAGMWWVRAVNEYL 419 (579)
Q Consensus 398 ~gfleg~~~~~~w~~~~v~eFL 419 (579)
+.+++. +..+.+.+.+|+
T Consensus 233 ~~~~~~----p~~~~~~i~~fl 250 (251)
T TIGR02427 233 IPCVEQ----PEAFNAALRDFL 250 (251)
T ss_pred cccccC----hHHHHHHHHHHh
Confidence 999883 335778888886
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=6.5e-20 Score=194.30 Aligned_cols=239 Identities=17% Similarity=0.183 Sum_probs=138.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
.+|+|||+||+++ +...| ..++..|.+ +|+|+++|+||||.|+......|. ..+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~-~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGA-SIPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 4578999999965 44445 677888865 899999999999999754322222 23445666666544 3458999
Q ss_pred EEEchhHHHHHHHHhh-cCCCCCccEEEEEcCCcChhhh---hHHHhhhHH--HHHHHHH-----HHHh----------H
Q 008049 239 IGTSIGANILVKYLGE-EGEKTPVAGAAAICSPWDLLIG---DRFIGRRLI--QKIYDRA-----LTIG----------L 297 (579)
Q Consensus 239 vG~SlGG~ial~ya~~-~~~~~~v~a~V~is~p~d~~~~---~~~l~~~~~--~~~~~~~-----l~~~----------l 297 (579)
+||||||.+++.++.. +|+ +|.++|+++++...... ......... ...+... +... +
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 9999999999988875 577 89999999875322110 000000000 0000000 0000 0
Q ss_pred HHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHh------CCcccccCCCcccEEEEEeCCCCCC
Q 008049 298 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVC 371 (579)
Q Consensus 298 ~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpiv 371 (579)
...... .+. +.. ..-.++.+.+............+... ......+.+|++|+|+|+|++|+++
T Consensus 238 ~~~~~~---~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~ 306 (360)
T PLN02679 238 KNILLS---VYG---NKE-----AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFT 306 (360)
T ss_pred HHHHHH---hcc---Ccc-----cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCc
Confidence 000000 000 000 00001111110000000111111111 1112457789999999999999999
Q ss_pred CCCCcc----hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 372 TVEAIP----WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 372 p~~~~~----~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
|.+... .......+++++.+++++||+.++|. | ..+.+.|.+||+.+
T Consensus 307 p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~--P--e~~~~~I~~FL~~~ 357 (360)
T PLN02679 307 PLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR--P--DLVHEKLLPWLAQL 357 (360)
T ss_pred CchhhHHHHHHhhhccCCceEEEEcCCCCCCccccC--H--HHHHHHHHHHHHhc
Confidence 986311 12345578999999999999999883 3 35899999999875
No 19
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.85 E-value=5.4e-21 Score=187.50 Aligned_cols=232 Identities=11% Similarity=0.147 Sum_probs=133.6
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
.|.||++||+++ +...| +.++..|.+ +|+|+++|+||||.|+.... .++.++++.+.... ..+++++|
T Consensus 4 ~~~iv~~HG~~~-~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGWGM-NAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCCCC-chhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 367999999954 55555 778888864 79999999999999864321 12333444444333 35899999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHH---HhhhHHHHHHH---HHHHHhHHHHHhhhccccccccCh
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF---IGRRLIQKIYD---RALTIGLQDYAQLHEPRYSRLANW 314 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~---l~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~~~~d~ 314 (579)
|||||.+++.++.++|+ ++.++|++++.........+ +.......+.. ......+..+.... .+.. ...
T Consensus 72 ~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~ 146 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ--TLGT-PTA 146 (245)
T ss_pred EcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH--HhcC-Ccc
Confidence 99999999999999988 79999998764322110000 00000000000 00000011110000 0000 000
Q ss_pred hHhhccCCHHHHHhhhhcc-cCCCCCHHH---HHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008049 315 EGIKKSRSIRDFDSHATCL-VGKFETVDT---YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 390 (579)
Q Consensus 315 ~~i~~~~sl~efd~~~t~~-~~g~~s~~~---yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 390 (579)
. .....+...+... ......... .+...+....+.+|++|+|+|+|++|+++|.+.... .....+++++.
T Consensus 147 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~ 220 (245)
T TIGR01738 147 R-----QDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY-LDKLAPHSELY 220 (245)
T ss_pred c-----hHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH-HHHhCCCCeEE
Confidence 0 0000111111000 000011111 111222335678999999999999999999875443 45667899999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHH
Q 008049 391 TTWHGGHLAFFEGLTAAGMWWVRAVNEYL 419 (579)
Q Consensus 391 ~~~~GGH~gfleg~~~~~~w~~~~v~eFL 419 (579)
+++++||+.++|. +..+.+.+.+|+
T Consensus 221 ~~~~~gH~~~~e~----p~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLSH----AEAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCccccC----HHHHHHHHHhhC
Confidence 9999999999983 335888888884
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.85 E-value=3.1e-20 Score=184.19 Aligned_cols=240 Identities=17% Similarity=0.172 Sum_probs=137.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 237 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i~ 237 (579)
+++|+||++||+++++ ..| ..++..+. +||+|+++|+||||.|....+..+. ..+.+|+.++++++ ...+++
T Consensus 11 ~~~~~iv~lhG~~~~~-~~~-~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG-SYW-APQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcch-hHH-HHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEE
Confidence 4578999999996544 444 56676665 4799999999999999754332222 22334555555443 345799
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHh
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 317 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i 317 (579)
++||||||.+++.+++.+++ .+.++|++++............... ..+.... ....+... ...+.....+.
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-~~~~~~~~~~~-- 154 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVR-IALLQHA---GPEAYVHA-QALFLYPADWI-- 154 (257)
T ss_pred EEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHH-HHHHhcc---Ccchhhhh-hhhhhccccHh--
Confidence 99999999999999999887 7999999886443321111000000 0000000 00000000 00000000000
Q ss_pred hccCCHHHHHhhhhcccCCCCCHH------HHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008049 318 KKSRSIRDFDSHATCLVGKFETVD------TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 391 (579)
Q Consensus 318 ~~~~sl~efd~~~t~~~~g~~s~~------~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 391 (579)
.... .............+.... ......+....+.++++|+|+++|++|+++|++.... .....+++++..
T Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~ 231 (257)
T TIGR03611 155 SENA--ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLR-LAAALPNAQLKL 231 (257)
T ss_pred hccc--hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHH-HHHhcCCceEEE
Confidence 0000 000000000000111111 1112223345678899999999999999999875443 455678899999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 392 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 392 ~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
++++||..+++. +..+.+.+.+||++
T Consensus 232 ~~~~gH~~~~~~----~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 232 LPYGGHASNVTD----PETFNRALLDFLKT 257 (257)
T ss_pred ECCCCCCccccC----HHHHHHHHHHHhcC
Confidence 999999988873 33588889999853
No 21
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=4.8e-20 Score=187.48 Aligned_cols=250 Identities=13% Similarity=0.067 Sum_probs=159.1
Q ss_pred eEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC
Q 008049 121 RRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 121 ~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 200 (579)
..+.+.+.||.+|...|..|.+.. ....++||++||+++. ...| ..+++.|+++||.|+.+|+||
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~-------------~~~~~~vIi~HGf~~~-~~~~-~~~A~~La~~G~~vLrfD~rg 74 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENS-------------PKKNNTILIASGFARR-MDHF-AGLAEYLSSNGFHVIRYDSLH 74 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccC-------------CCCCCEEEEeCCCCCC-hHHH-HHHHHHHHHCCCEEEEecCCC
Confidence 557889999999998776664321 2556899999999764 3334 899999999999999999999
Q ss_pred C-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHH
Q 008049 201 L-GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF 279 (579)
Q Consensus 201 ~-G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~ 279 (579)
+ |.|++...........+|+.++++|++++. ..+++++||||||.+++..+++ . +++++|+.||..++...
T Consensus 75 ~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~--~--~v~~lI~~sp~~~l~d~--- 146 (307)
T PRK13604 75 HVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINE--I--DLSFLITAVGVVNLRDT--- 146 (307)
T ss_pred CCCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcC--C--CCCEEEEcCCcccHHHH---
Confidence 8 888664332322334789999999998864 4589999999999998655543 2 48899999888775421
Q ss_pred HhhhHHHHHHHHHHHHhHHHHHhh-hccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcc
Q 008049 280 IGRRLIQKIYDRALTIGLQDYAQL-HEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 358 (579)
Q Consensus 280 l~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~v 358 (579)
+.+ .++..... ....+....|..... -....|-.... ..++ +...++.+.+.++++
T Consensus 147 l~~-------------~~~~~~~~~p~~~lp~~~d~~g~~--l~~~~f~~~~~--~~~~------~~~~s~i~~~~~l~~ 203 (307)
T PRK13604 147 LER-------------ALGYDYLSLPIDELPEDLDFEGHN--LGSEVFVTDCF--KHGW------DTLDSTINKMKGLDI 203 (307)
T ss_pred HHH-------------hhhcccccCccccccccccccccc--ccHHHHHHHHH--hcCc------cccccHHHHHhhcCC
Confidence 111 00000000 000000000000000 00011110000 0000 112334466778899
Q ss_pred cEEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 359 PLLCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 359 PvLiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
|+|+|||.+|.+||.+....... ..+.++++..+++++|.- .|+ ...+..|.+++...
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l-~~~--------~~~~~~~~~~~~~~ 262 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL-GEN--------LVVLRNFYQSVTKA 262 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc-Ccc--------hHHHHHHHHHHHHH
Confidence 99999999999999986654333 334689999999999953 342 24577888887653
No 22
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.85 E-value=1.3e-20 Score=197.51 Aligned_cols=272 Identities=17% Similarity=0.151 Sum_probs=156.2
Q ss_pred EEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH------------------------H
Q 008049 125 FRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI------------------------R 180 (579)
Q Consensus 125 l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi------------------------~ 180 (579)
+...||..|.+..+.+. +.+.+|+++||+++.+...|+ .
T Consensus 2 ~~~~~g~~l~~~~~~~~-----------------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~ 64 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----------------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKD 64 (332)
T ss_pred ccCCCCCeEEEeeeecc-----------------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeH
Confidence 45678988866544431 235789999999776654443 3
Q ss_pred HHHHHHHhCCCeEEEEcCCCCCCCCCCCC-CCCC---CCcHHHHHHHHHHHHH-------------------HCC-CCcE
Q 008049 181 HLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN---AGWTEDAREVIGYLHH-------------------EYP-KAPL 236 (579)
Q Consensus 181 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~---~~~~eDl~~~l~~l~~-------------------~~p-~~~i 236 (579)
.+++.|.++||+|+++|+||||.|..... ..+. ....+|+.++++.+++ .+| +.|+
T Consensus 65 ~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 144 (332)
T TIGR01607 65 SWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPM 144 (332)
T ss_pred HHHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCce
Confidence 57899999999999999999999875422 2111 1234788888887765 455 6799
Q ss_pred EEEEEchhHHHHHHHHhhcCCC------CCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008049 237 FAIGTSIGANILVKYLGEEGEK------TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 310 (579)
Q Consensus 237 ~lvG~SlGG~ial~ya~~~~~~------~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 310 (579)
+++||||||++++.++.+.+.. ..++|+|++++++.+.......... ...... .+...+....+.....-..
T Consensus 145 ~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~-~~~~~~-~l~~~~~~~~p~~~~~~~~ 222 (332)
T TIGR01607 145 YIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFK-FKYFYL-PVMNFMSRVFPTFRISKKI 222 (332)
T ss_pred eEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcch-hhhhHH-HHHHHHHHHCCcccccCcc
Confidence 9999999999999998765431 2589999999887542110000000 000000 0111111111111000000
Q ss_pred ccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCC-cccccCCC--cccEEEEEeCCCCCCCCCCcchHHH-hcCCC
Q 008049 311 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS-SSTYVGNV--SIPLLCISSLDDPVCTVEAIPWDEC-RANKN 386 (579)
Q Consensus 311 ~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s-~~~~l~~I--~vPvLiI~g~dDpivp~~~~~~~~~-~~~~~ 386 (579)
...++. ......+.|..............+.+.... ....+.++ ++|+|+|+|++|++++++....... ...++
T Consensus 223 ~~~~~~--~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~ 300 (332)
T TIGR01607 223 RYEKSP--YVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISN 300 (332)
T ss_pred ccccCh--hhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCC
Confidence 000000 000011111111000000111222222111 11244555 7999999999999999875544322 34467
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 387 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 387 ~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
+++.++++++|..+.| +++..+.+.+.+||+
T Consensus 301 ~~l~~~~g~~H~i~~E---~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 301 KELHTLEDMDHVITIE---PGNEEVLKKIIEWIS 331 (332)
T ss_pred cEEEEECCCCCCCccC---CCHHHHHHHHHHHhh
Confidence 8999999999999988 333347778888875
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.85 E-value=7e-20 Score=184.91 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=136.1
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
+.|+||++||+++ +...| +.++..|++ +|+|+++|+||||.|.......++ ..+.+|+.++++. ....++++
T Consensus 27 ~~~~vv~~hG~~~-~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~----~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGA-STHSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA----EGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCC-CHHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH----cCCCCceE
Confidence 4578999999955 44445 677888765 799999999999998754331222 2233455544443 34458999
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH-HHhhhHHHHHHHHHHHHhHHHHHhhhccccccccC-hhH
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN-WEG 316 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~-~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d-~~~ 316 (579)
+||||||.+++.++..+++ ++.++|++++......... ..............+...+................ ...
T Consensus 100 vG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGS 177 (278)
T ss_pred EEECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcccc
Confidence 9999999999999999887 7899999987654221100 00000000000000000000000000000000000 000
Q ss_pred hhccCCHHHHHhhhhcccCCCCCHHHHHHhC---CcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008049 317 IKKSRSIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 393 (579)
Q Consensus 317 i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 393 (579)
.........+....... ..+....++.... .....+++|++|+|+|+|++|.++|.+.... .....++++++.++
T Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~-~~~~~~~~~~~~~~ 255 (278)
T TIGR03056 178 LLDKAGMTYYGRLIRSP-AHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR-AATRVPTATLHVVP 255 (278)
T ss_pred ccccchhhHHHHhhcCc-hhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH-HHHhccCCeEEEEC
Confidence 00000000011000000 0000111111111 1123577899999999999999999875443 55667899999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHH
Q 008049 394 HGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 394 ~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
++||+.+.|. +..+.+.|.+|++
T Consensus 256 ~~gH~~~~e~----p~~~~~~i~~f~~ 278 (278)
T TIGR03056 256 GGGHLVHEEQ----ADGVVGLILQAAE 278 (278)
T ss_pred CCCCcccccC----HHHHHHHHHHHhC
Confidence 9999999883 3358889998874
No 24
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.84 E-value=2e-20 Score=183.33 Aligned_cols=241 Identities=16% Similarity=0.240 Sum_probs=136.8
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
|+||++||+++++. .| +.++..|+ +||+|+++|+||+|.|+.... ....++.+.+.+++..+.+..+..+++++||
T Consensus 2 ~~vv~~hG~~~~~~-~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 77 (251)
T TIGR03695 2 PVLVFLHGFLGSGA-DW-QALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVGY 77 (251)
T ss_pred CEEEEEcCCCCchh-hH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 67999999965444 45 78888888 799999999999999965421 1112222333333666666666779999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHH-HhHHHHHhhhc--cccccccChhHhh
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT-IGLQDYAQLHE--PRYSRLANWEGIK 318 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~-~~l~~~~~~~~--~~~~~~~d~~~i~ 318 (579)
||||.+++.++..+++ .+.+++++++............+......+...+. ..+..+..... ..+.......
T Consensus 78 S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 152 (251)
T TIGR03695 78 SMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLP--- 152 (251)
T ss_pred ccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCC---
Confidence 9999999999999988 79999999875443221111000000000000000 00011110000 0000000000
Q ss_pred ccCCHHHHHhhhhcccCCCCCHHHHHHh------CCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008049 319 KSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 392 (579)
Q Consensus 319 ~~~sl~efd~~~t~~~~g~~s~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 392 (579)
......+..... .........++.. ......+.++++|+|+++|++|+.++ +. ........++++++++
T Consensus 153 -~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~-~~~~~~~~~~~~~~~~ 227 (251)
T TIGR03695 153 -PEQRQALRAKRL--ANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QI-AKEMQKLLPNLTLVII 227 (251)
T ss_pred -hHHhHHHHHhcc--cccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HH-HHHHHhcCCCCcEEEE
Confidence 000000000000 0000111111111 11224567899999999999998764 22 2235566788999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHH
Q 008049 393 WHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 393 ~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
+++||+.++|. ++ .+.+.+.+|++
T Consensus 228 ~~~gH~~~~e~--~~--~~~~~i~~~l~ 251 (251)
T TIGR03695 228 ANAGHNIHLEN--PE--AFAKILLAFLE 251 (251)
T ss_pred cCCCCCcCccC--hH--HHHHHHHHHhC
Confidence 99999999984 33 47888888873
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.84 E-value=3.1e-20 Score=186.68 Aligned_cols=233 Identities=11% Similarity=0.081 Sum_probs=134.7
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
|.|||+||+++ +...| +.++..|.+ .|+|+++|+||||.|+... .+ ..+|+.+ .+.+. ...+++++||
T Consensus 14 ~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~---~~~~~~~---~l~~~-~~~~~~lvGh 81 (256)
T PRK10349 14 VHLVLLHGWGL-NAEVW-RCIDEELSS-HFTLHLVDLPGFGRSRGFG--AL---SLADMAE---AVLQQ-APDKAIWLGW 81 (256)
T ss_pred CeEEEECCCCC-ChhHH-HHHHHHHhc-CCEEEEecCCCCCCCCCCC--CC---CHHHHHH---HHHhc-CCCCeEEEEE
Confidence 46999999954 44445 678888875 5999999999999996432 11 2233333 33322 3458999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH--HHhhhHHHHHHHHH---HHHhHHHHHhhhccccccccChhH
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR--FIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSRLANWEG 316 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~--~l~~~~~~~~~~~~---l~~~l~~~~~~~~~~~~~~~d~~~ 316 (579)
||||.+++.++.++|+ +|.++|+++++........ .........+.... +...+..+..... .........
T Consensus 82 S~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 157 (256)
T PRK10349 82 SLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGTETARQD 157 (256)
T ss_pred CHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccCchHHHH
Confidence 9999999999999888 8999999976432211000 00000111111100 0001111110000 000000000
Q ss_pred hhccCCHHHHHhhhhc-ccCCCCC---HHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008049 317 IKKSRSIRDFDSHATC-LVGKFET---VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 392 (579)
Q Consensus 317 i~~~~sl~efd~~~t~-~~~g~~s---~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 392 (579)
..++...... ....... ..+.+...+....+.+|++|+|+|+|++|+++|.+... ......++.+++++
T Consensus 158 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~i~~~~~~~i 230 (256)
T PRK10349 158 ------ARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP-MLDKLWPHSESYIF 230 (256)
T ss_pred ------HHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH-HHHHhCCCCeEEEe
Confidence 0011111000 0000000 11222333445678899999999999999999876543 35567799999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHHh
Q 008049 393 WHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 393 ~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
+++||+.++|. +..+.+.+.+|-++
T Consensus 231 ~~~gH~~~~e~----p~~f~~~l~~~~~~ 255 (256)
T PRK10349 231 AKAAHAPFISH----PAEFCHLLVALKQR 255 (256)
T ss_pred CCCCCCccccC----HHHHHHHHHHHhcc
Confidence 99999999983 33588888887543
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=2.7e-19 Score=180.00 Aligned_cols=248 Identities=13% Similarity=0.141 Sum_probs=133.6
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
+|+||++||+.|++.. |+..+...+.+.||+|+++|+||||.|....... .....+++.+.+..+.+.....+++++|
T Consensus 25 ~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~liG 102 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSD-ELWTIDYFVDELEEVREKLGLDKFYLLG 102 (288)
T ss_pred CCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccc-ccccHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4679999998776654 4466777777679999999999999987542211 0011234444444444444455799999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhh---cccccccc-Chh-
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLH---EPRYSRLA-NWE- 315 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~-d~~- 315 (579)
|||||.+++.++..+++ ++.++|++++............. .. ..+.......+....... ........ .+.
T Consensus 103 ~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKELNR-LR-KELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYH 178 (288)
T ss_pred eehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHHHH-HH-hhcChhHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence 99999999999999988 79999988764432211111000 00 000000000000000000 00000000 000
Q ss_pred -Hhhcc----CCHHHHHhh----hhcccCCCCC--HHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcC
Q 008049 316 -GIKKS----RSIRDFDSH----ATCLVGKFET--VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 384 (579)
Q Consensus 316 -~i~~~----~sl~efd~~----~t~~~~g~~s--~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~ 384 (579)
..... .....+... ......+... ....+........+.+|++|+|+++|++|++ +++... ......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~-~~~~~~ 256 (288)
T TIGR01250 179 HLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAR-EMQELI 256 (288)
T ss_pred HhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHH-HHHHhc
Confidence 00000 000000000 0000000000 0001111122345678999999999999985 444333 345567
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 385 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 385 ~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
++.++++++++||+.++|. +..+.+.|.+||+
T Consensus 257 ~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 288 (288)
T TIGR01250 257 AGSRLVVFPDGSHMTMIED----PEVYFKLLSDFIR 288 (288)
T ss_pred cCCeEEEeCCCCCCcccCC----HHHHHHHHHHHhC
Confidence 8889999999999999983 3358888888874
No 27
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.84 E-value=6e-20 Score=183.73 Aligned_cols=234 Identities=15% Similarity=0.099 Sum_probs=140.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
.++|+||++||+.++. ..| ..++..|.+ +|+|+++|+||||.|..... .....+.+|+.++++++ ...++++
T Consensus 14 ~~~~~iv~lhG~~~~~-~~~-~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL-DNL-GVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKATF 85 (255)
T ss_pred CCCCCEEEECCCCCch-hHH-HHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceEE
Confidence 4678899999996654 345 677777765 79999999999999875422 22234567777777765 3357999
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcCC-cChhhhhHHHhhhHHHHHHHHHHHHhH---HHHHhhhccccccccCh
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICSP-WDLLIGDRFIGRRLIQKIYDRALTIGL---QDYAQLHEPRYSRLANW 314 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~p-~d~~~~~~~l~~~~~~~~~~~~l~~~l---~~~~~~~~~~~~~~~d~ 314 (579)
+||||||.+++.++..+++ +|+++|+++++ .+... ... ......+ ........ ..........+ .
T Consensus 86 vGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~-~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~- 154 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHV-RRH--DEIFAAI-NAVSEAGATTRQQAAAIMRQHL----N- 154 (255)
T ss_pred EEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccc-hhh--HHHHHHH-HHhhhcccccHHHHHHHHHHhc----C-
Confidence 9999999999999999988 89999998643 22110 000 0000000 00000000 00000000000 0
Q ss_pred hHhhccCCHHHHHh-hhhcccC--CCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008049 315 EGIKKSRSIRDFDS-HATCLVG--KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 391 (579)
Q Consensus 315 ~~i~~~~sl~efd~-~~t~~~~--g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 391 (579)
......+.. .+..... ........+........+.++++|+|+|+|++|++++.+.... .....+++++++
T Consensus 155 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~ 228 (255)
T PRK10673 155 -----EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDD-LLAQFPQARAHV 228 (255)
T ss_pred -----CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHH-HHHhCCCcEEEE
Confidence 000000000 0000000 0001112223333334567889999999999999998765443 566778999999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 392 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 392 ~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
++++||+.++|. +..+.+.+.+||+.
T Consensus 229 ~~~~gH~~~~~~----p~~~~~~l~~fl~~ 254 (255)
T PRK10673 229 IAGAGHWVHAEK----PDAVLRAIRRYLND 254 (255)
T ss_pred eCCCCCeeeccC----HHHHHHHHHHHHhc
Confidence 999999998873 34588999999864
No 28
>PLN02965 Probable pheophorbidase
Probab=99.84 E-value=3.8e-20 Score=186.28 Aligned_cols=238 Identities=11% Similarity=0.067 Sum_probs=137.6
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
.|||+||+.+ +...| ..++..|.+.||+|+++|+||||.|+......+. ....+|+.++++.+. ...+++++||
T Consensus 5 ~vvllHG~~~-~~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASH-GAWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGH 79 (255)
T ss_pred EEEEECCCCC-CcCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEec
Confidence 3899999954 44445 6888999888999999999999999754332222 234456666665542 1248999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh--hhHHHhhhHHHHHHHHHHHHhHHHHH-hhhcc-cccc-ccChhH
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI--GDRFIGRRLIQKIYDRALTIGLQDYA-QLHEP-RYSR-LANWEG 316 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~--~~~~l~~~~~~~~~~~~l~~~l~~~~-~~~~~-~~~~-~~d~~~ 316 (579)
||||.+++.++.++|+ +|.++|++++...... ....... ..... ..+.... ..... .... ......
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSIISPRLKN----VMEGT---EKIWDYTFGEGPDKPPTGIMMKPEF 150 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCCccHHHHh----hhhcc---ccceeeeeccCCCCCcchhhcCHHH
Confidence 9999999999999998 8999999987521110 0000000 00000 0000000 00000 0000 000000
Q ss_pred h----hccCCHHHHHhhhhc-ccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008049 317 I----KKSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 391 (579)
Q Consensus 317 i----~~~~sl~efd~~~t~-~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 391 (579)
. .......+....... ........... ......+..+++|+|+|+|++|+++|++... ......++.++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~-~~~~~~~~a~~~~ 226 (255)
T PLN02965 151 VRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQD-VMVENWPPAQTYV 226 (255)
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCCCCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHH-HHHHhCCcceEEE
Confidence 0 000000000000000 00001111111 0111245679999999999999999986543 3667888999999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 392 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 392 ~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
++++||+.++|. |+ .+.+.+.+|++.+
T Consensus 227 i~~~GH~~~~e~--p~--~v~~~l~~~~~~~ 253 (255)
T PLN02965 227 LEDSDHSAFFSV--PT--TLFQYLLQAVSSL 253 (255)
T ss_pred ecCCCCchhhcC--HH--HHHHHHHHHHHHh
Confidence 999999999994 33 4888999998765
No 29
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.83 E-value=2.6e-20 Score=176.48 Aligned_cols=224 Identities=14% Similarity=0.166 Sum_probs=152.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
-.||++||++|++.+ ++.++++|+++||.|.++++||||..+-.--......|.+|+.+..+++.+. +...|.++|.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 569999999998877 6899999999999999999999998652222223346889999999999844 2346999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccC
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 321 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 321 (579)
||||.++++++..++ ++++|.+|+|.........++. +... .++.+++. .+
T Consensus 93 SmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~-----~l~y--~~~~kk~e------------------~k 143 (243)
T COG1647 93 SMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEG-----LLEY--FRNAKKYE------------------GK 143 (243)
T ss_pred cchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHH-----HHHH--HHHhhhcc------------------CC
Confidence 999999999998874 7799999999876433222111 1010 01111111 01
Q ss_pred CHHHHHhhhhcccC-CCCCHHHHHHhC-CcccccCCCcccEEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCCCcc
Q 008049 322 SIRDFDSHATCLVG-KFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHGGHL 398 (579)
Q Consensus 322 sl~efd~~~t~~~~-g~~s~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~GGH~ 398 (579)
+..++++....-.. -..+..+++... .....+..|..|++++.|.+|+++|.+..... ........++..+++.||+
T Consensus 144 ~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 144 DQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred CHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 11111111110000 011122222211 23467889999999999999999999865542 3455677899999999999
Q ss_pred ccccccccCcccHHHHHHHHHH
Q 008049 399 AFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 399 gfleg~~~~~~w~~~~v~eFL~ 420 (579)
.-.+ -++.-+.+.|.+||+
T Consensus 224 It~D---~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLD---KERDQVEEDVITFLE 242 (243)
T ss_pred eecc---hhHHHHHHHHHHHhh
Confidence 8776 344568899999986
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.83 E-value=6.5e-20 Score=176.94 Aligned_cols=215 Identities=21% Similarity=0.272 Sum_probs=125.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCC---cHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAG---WTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~---~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
|||+||+++++ ..| ..+++.|+ +||+|+++|+||+|.|+.... ..... +.+|+.++++. ....+++++|
T Consensus 1 vv~~hG~~~~~-~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~----~~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDA----LGIKKVILVG 72 (228)
T ss_dssp EEEE-STTTTG-GGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHH----TTTSSEEEEE
T ss_pred eEEECCCCCCH-HHH-HHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcccc----cccccccccc
Confidence 78999996544 445 67888884 799999999999999976542 11122 23344444433 3336899999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhh--HHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhh
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD--RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 318 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~--~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~ 318 (579)
||+||.+++.++.++|+ +|.++|+++++....... ... ..+...+...... .......................
T Consensus 73 ~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSR-SLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp ETHHHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccccccccccccc--ccccceeeccccccccccccccc-chhhhhhhhcccc-ccccccccccccccccccccccc
Confidence 99999999999999998 899999999988654322 111 1111111111000 00000000000000000000000
Q ss_pred ccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008049 319 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 398 (579)
Q Consensus 319 ~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 398 (579)
.. ....+.+.+. ..+........+.++++|+++++|++|++++.+.... .....+++++.+++++||+
T Consensus 149 ~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~ 216 (228)
T PF12697_consen 149 RS-SRRALAEYLR----------SNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEE-LADKLPNAELVVIPGAGHF 216 (228)
T ss_dssp HH-HHHHHHHHHH----------HHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHH-HHHHSTTEEEEEETTSSST
T ss_pred cc-cccccccccc----------cccccccccccccccCCCeEEeecCCCCCCCHHHHHH-HHHHCCCCEEEEECCCCCc
Confidence 00 0000000000 0001112235667889999999999999999554433 4556789999999999999
Q ss_pred cccc
Q 008049 399 AFFE 402 (579)
Q Consensus 399 gfle 402 (579)
.++|
T Consensus 217 ~~~~ 220 (228)
T PF12697_consen 217 LFLE 220 (228)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 9998
No 31
>PRK06489 hypothetical protein; Provisional
Probab=99.83 E-value=2e-19 Score=190.66 Aligned_cols=253 Identities=14% Similarity=0.116 Sum_probs=135.7
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHH-------HhCCCeEEEEcCCCCCCCCCCCCCC---CCCCcHHHHH-HHHHHHHH
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNT-------AKRGWNVVVSNHRGLGGVSITSDCF---YNAGWTEDAR-EVIGYLHH 229 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l-------~~~Gy~Vvv~D~RG~G~S~~~~~~~---~~~~~~eDl~-~~l~~l~~ 229 (579)
+|.|||+||+++++..++...+...+ ..++|+|+++|+||||.|+...... +.....+|+. +++..+.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 57899999997654443212444443 2468999999999999997543211 0011223443 33344444
Q ss_pred HCCCCcEE-EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHH----------HHhHH
Q 008049 230 EYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRAL----------TIGLQ 298 (579)
Q Consensus 230 ~~p~~~i~-lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l----------~~~l~ 298 (579)
..+..++. ++||||||++++.++.++|+ +|.++|++++........................ ...+.
T Consensus 149 ~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T PRK06489 149 GLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLK 226 (360)
T ss_pred hcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence 44545664 89999999999999999999 8999999986431111000000000000000000 00000
Q ss_pred HHHhhhccccccccChhHhhccCC---HH-HHHhhhhcccCCCCCHHHHHH------hCCcccccCCCcccEEEEEeCCC
Q 008049 299 DYAQLHEPRYSRLANWEGIKKSRS---IR-DFDSHATCLVGKFETVDTYYR------NCSSSTYVGNVSIPLLCISSLDD 368 (579)
Q Consensus 299 ~~~~~~~~~~~~~~d~~~i~~~~s---l~-efd~~~t~~~~g~~s~~~yy~------~~s~~~~l~~I~vPvLiI~g~dD 368 (579)
....... .+.............. .. .++...... .. .....+.. ..+....+.+|++|+|+|+|++|
T Consensus 227 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D 303 (360)
T PRK06489 227 RANPMFA-IATSGGTLAYQAQAPTRAAADKLVDERLAAP-VT-ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADD 303 (360)
T ss_pred HHHHHHH-HHHhCCHHHHHHhcCChHHHHHHHHHHHHhh-hh-cCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCC
Confidence 0000000 0000000000000000 00 011110000 00 01122211 11233567899999999999999
Q ss_pred CCCCCCCc-chHHHhcCCCEEEEEeCCC----CccccccccccCcccHHHHHHHHHHhhc
Q 008049 369 PVCTVEAI-PWDECRANKNVVLATTWHG----GHLAFFEGLTAAGMWWVRAVNEYLGVLH 423 (579)
Q Consensus 369 pivp~~~~-~~~~~~~~~~~~l~~~~~G----GH~gfleg~~~~~~w~~~~v~eFL~~~~ 423 (579)
+++|++.. ........|+.++++++++ ||+.+ | .| ..+.+.|.+||+.+.
T Consensus 304 ~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e--~P--~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 304 ERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-G--SA--KFWKAYLAEFLAQVP 358 (360)
T ss_pred cccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-c--CH--HHHHHHHHHHHHhcc
Confidence 99998753 1345677899999999985 99986 6 24 359999999998763
No 32
>PLN02872 triacylglycerol lipase
Probab=99.83 E-value=5e-20 Score=196.18 Aligned_cols=308 Identities=17% Similarity=0.163 Sum_probs=177.2
Q ss_pred cchhHhhhhhhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH--
Q 008049 101 SPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-- 178 (579)
Q Consensus 101 ~ghlQT~~~~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~y-- 178 (579)
..-+||++..++.+. ..+.+++.++++||..|.++|..+.... .....+|+|+++||+.+++..+.
T Consensus 26 ~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~-----------~~~~~~~~Vll~HGl~~ss~~w~~~ 93 (395)
T PLN02872 26 RSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPR-----------LGSQRGPPVLLQHGLFMAGDAWFLN 93 (395)
T ss_pred CCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCC-----------CCCCCCCeEEEeCcccccccceeec
Confidence 446899987777654 5688999999999999999998542210 01234688999999966555422
Q ss_pred --HHHHHHHHHhCCCeEEEEcCCCCCCCCC----C--CCCCCCCCc----HHHHHHHHHHHHHHCCCCcEEEEEEchhHH
Q 008049 179 --IRHLVFNTAKRGWNVVVSNHRGLGGVSI----T--SDCFYNAGW----TEDAREVIGYLHHEYPKAPLFAIGTSIGAN 246 (579)
Q Consensus 179 --i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~----~--~~~~~~~~~----~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ 246 (579)
.+.++..|+++||+|+++|.||++.+.. . ...++...+ ..|+.++++++.+..+ .+++++||||||.
T Consensus 94 ~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~ 172 (395)
T PLN02872 94 SPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTI 172 (395)
T ss_pred CcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHH
Confidence 1456778899999999999999876532 1 112212222 2699999999976543 6899999999999
Q ss_pred HHHHHHhhcCC-CCCccEEEEEcCCcChhhhhHHHhhhH----HHHHHH-----------HHHHHhHHHHHhh---hcc-
Q 008049 247 ILVKYLGEEGE-KTPVAGAAAICSPWDLLIGDRFIGRRL----IQKIYD-----------RALTIGLQDYAQL---HEP- 306 (579)
Q Consensus 247 ial~ya~~~~~-~~~v~a~V~is~p~d~~~~~~~l~~~~----~~~~~~-----------~~l~~~l~~~~~~---~~~- 306 (579)
+++.++ .+|+ +.+|+++++++|...+......+.... ...++. ..+..-+...... ...
T Consensus 173 ~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~ 251 (395)
T PLN02872 173 MSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDL 251 (395)
T ss_pred HHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHH
Confidence 998655 4444 225778888877543321111110000 000000 0000000000000 000
Q ss_pred --ccc---cccChhHh-------hccCCHH---HHHhhhhcc---cCCCC---CHHHHHHhCCcccccCCC--cccEEEE
Q 008049 307 --RYS---RLANWEGI-------KKSRSIR---DFDSHATCL---VGKFE---TVDTYYRNCSSSTYVGNV--SIPLLCI 363 (579)
Q Consensus 307 --~~~---~~~d~~~i-------~~~~sl~---efd~~~t~~---~~g~~---s~~~yy~~~s~~~~l~~I--~vPvLiI 363 (579)
.+. ...+...+ ....+.+ .|.+.+... .+.|. +...|-....+...+.+| ++|++++
T Consensus 252 ~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~ 331 (395)
T PLN02872 252 LTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMG 331 (395)
T ss_pred HHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEE
Confidence 000 00010000 0112222 222222211 11221 222233334455678888 6899999
Q ss_pred EeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008049 364 SSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 423 (579)
Q Consensus 364 ~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~ 423 (579)
+|++|.+++++............+.+..+++.||+.|+-+. ..+..+.+.|.+|+++..
T Consensus 332 ~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~-eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 332 YGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLST-SAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCc-chHHHHHHHHHHHHHHhh
Confidence 99999999987665533333333678889999999776221 123357899999998653
No 33
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.83 E-value=6.8e-20 Score=182.02 Aligned_cols=231 Identities=13% Similarity=0.128 Sum_probs=128.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
+|+||++||+++++ ..| +.++..+ .+|+|+++|+||||.|+..... ......+|+.++++ ..+..+++++|
T Consensus 2 ~p~vvllHG~~~~~-~~w-~~~~~~l--~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~----~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDW-QPVGEAL--PDYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQ----SYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCCCh-HHH-HHHHHHc--CCCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHH----HcCCCCeEEEE
Confidence 47799999996544 455 7788877 3799999999999999754321 11122344444444 33557999999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHH-HhHHHHHhhh--ccccccccChhHh
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT-IGLQDYAQLH--EPRYSRLANWEGI 317 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~-~~l~~~~~~~--~~~~~~~~d~~~i 317 (579)
|||||.+++.++.++++. +|+++++++++...........+......+...+. ..+....... ...+.. ...
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 147 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNA--- 147 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCc---
Confidence 999999999999998651 49999988766533221111100000000000000 0000000000 000000 000
Q ss_pred hccCCHHHHHhhhhcccCCCCCHHHHHHh------CCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008049 318 KKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 391 (579)
Q Consensus 318 ~~~~sl~efd~~~t~~~~g~~s~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 391 (579)
.....+..... ...+ .....++.. ......+.+|++|+++|+|++|+++. . ... ..++++++
T Consensus 148 ---~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~-~~~-~~~~~~~~ 215 (242)
T PRK11126 148 ---EQRQQLVAKRS-NNNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----A-LAQ-QLALPLHV 215 (242)
T ss_pred ---cHHHHHHHhcc-cCCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----H-HHH-HhcCeEEE
Confidence 00000000000 0000 011112211 11224678899999999999998652 1 122 24789999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 392 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 392 ~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
++++||+.++|. +..+.+.|.+|++.
T Consensus 216 i~~~gH~~~~e~----p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHREN----PAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhhC----hHHHHHHHHHHHhh
Confidence 999999999983 34688999999864
No 34
>PLN02578 hydrolase
Probab=99.83 E-value=1.2e-19 Score=191.95 Aligned_cols=242 Identities=19% Similarity=0.192 Sum_probs=136.8
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
|.||++||+++ +...| ..++..|++ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++||
T Consensus 87 ~~vvliHG~~~-~~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG~ 159 (354)
T PLN02578 87 LPIVLIHGFGA-SAFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVGN 159 (354)
T ss_pred CeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEEE
Confidence 56899999955 44444 567777765 799999999999999765322222234456666666554 358999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH-----------HHhhhHHH---HHHHHHHHHhHHHHHhhhccc
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-----------FIGRRLIQ---KIYDRALTIGLQDYAQLHEPR 307 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~-----------~l~~~~~~---~~~~~~l~~~l~~~~~~~~~~ 307 (579)
||||.+++.++.++|+ +++++|+++++........ ........ ..+.+.....+. ........
T Consensus 160 S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (354)
T PLN02578 160 SLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF-WQAKQPSR 236 (354)
T ss_pred CHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH-HHhcCHHH
Confidence 9999999999999998 8999999986532211100 00000000 000000000000 00000000
Q ss_pred cccccChhHhhccCCHHHH-HhhhhcccCCCCCHHHHHHh----------CCcccccCCCcccEEEEEeCCCCCCCCCCc
Q 008049 308 YSRLANWEGIKKSRSIRDF-DSHATCLVGKFETVDTYYRN----------CSSSTYVGNVSIPLLCISSLDDPVCTVEAI 376 (579)
Q Consensus 308 ~~~~~d~~~i~~~~sl~ef-d~~~t~~~~g~~s~~~yy~~----------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~ 376 (579)
...... ..........++ .+.+............+++. ......+.++++|+|+|+|++|+++|.+..
T Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~ 315 (354)
T PLN02578 237 IESVLK-SVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKA 315 (354)
T ss_pred HHHHHH-HhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHH
Confidence 000000 000000000011 11111111111111222211 112245788999999999999999988754
Q ss_pred chHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 377 PWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 377 ~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
.. .....++.+++.+ ++||+.+.|. +..+.+.|.+|++
T Consensus 316 ~~-l~~~~p~a~l~~i-~~GH~~~~e~----p~~~~~~I~~fl~ 353 (354)
T PLN02578 316 EK-IKAFYPDTTLVNL-QAGHCPHDEV----PEQVNKALLEWLS 353 (354)
T ss_pred HH-HHHhCCCCEEEEe-CCCCCccccC----HHHHHHHHHHHHh
Confidence 43 4566788888888 5899999883 3469999999986
No 35
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=4.1e-19 Score=182.21 Aligned_cols=242 Identities=12% Similarity=0.056 Sum_probs=133.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
+|+|||+||+. ++...| +.++..|.+ +|+|+++|+||||.|+......+ ..+|..+.+..+.+..+..+++++|
T Consensus 34 ~~~iv~lHG~~-~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG 107 (286)
T PRK03204 34 GPPILLCHGNP-TWSFLY-RDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY---QIDEHARVIGEFVDHLGLDRYLSMG 107 (286)
T ss_pred CCEEEEECCCC-ccHHHH-HHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46799999995 344344 677777765 69999999999999975432212 2456666666666666667899999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhh--hHHHhhhHHHHHHHHHHH-H-h-HHHHHhhhccccccccChh
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALT-I-G-LQDYAQLHEPRYSRLANWE 315 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~--~~~l~~~~~~~~~~~~l~-~-~-l~~~~~~~~~~~~~~~d~~ 315 (579)
|||||.+++.++..+++ +|+++|+++++.-.... ................+. . . ..++.... .....+..
T Consensus 108 ~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 182 (286)
T PRK03204 108 QDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAG---TEHRPSSA 182 (286)
T ss_pred ECccHHHHHHHHHhChh--heeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhcccc---ccCCCCHH
Confidence 99999999999999998 89999988765311100 000000000000000000 0 0 00000000 00000000
Q ss_pred Hh---hccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCC--CcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008049 316 GI---KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 390 (579)
Q Consensus 316 ~i---~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 390 (579)
.. ...................+.......... ...+.+ +++|+|+|+|++|.++++...........++.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~ 260 (286)
T PRK03204 183 VMAHYRAVQPNAAARRGVAEMPKQILAARPLLARL--AREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLV 260 (286)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHh--hhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEE
Confidence 00 000000000000000000000000000000 011111 38999999999999987654334456788999999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHH
Q 008049 391 TTWHGGHLAFFEGLTAAGMWWVRAVNEYL 419 (579)
Q Consensus 391 ~~~~GGH~gfleg~~~~~~w~~~~v~eFL 419 (579)
+++++||+.++|. |+ .+.+.+.+||
T Consensus 261 ~i~~aGH~~~~e~--Pe--~~~~~i~~~~ 285 (286)
T PRK03204 261 ELPNAKHFIQEDA--PD--RIAAAIIERF 285 (286)
T ss_pred EcCCCcccccccC--HH--HHHHHHHHhc
Confidence 9999999999983 33 4888888887
No 36
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.83 E-value=2.6e-19 Score=194.27 Aligned_cols=251 Identities=14% Similarity=0.182 Sum_probs=134.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHH---hCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHH-HHHHHHCCCCc
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTA---KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVI-GYLHHEYPKAP 235 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~---~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l-~~l~~~~p~~~ 235 (579)
.+|.|||+||++++. ..|-..+...+. +.||+|+++|+||||.|+......|. .++..+.+ ..+.+..+..+
T Consensus 200 ~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt---l~~~a~~l~~~ll~~lg~~k 275 (481)
T PLN03087 200 AKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT---LREHLEMIERSVLERYKVKS 275 (481)
T ss_pred CCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC---HHHHHHHHHHHHHHHcCCCC
Confidence 357899999996544 444223334444 47999999999999999754333232 23333333 23444455678
Q ss_pred EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH----HHhhhHH-HHHHHH-HHHHhHHHHHhhhcccc-
Q 008049 236 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR----FIGRRLI-QKIYDR-ALTIGLQDYAQLHEPRY- 308 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~----~l~~~~~-~~~~~~-~l~~~l~~~~~~~~~~~- 308 (579)
++++||||||.+++.++.++|+ +|+++|+++++........ ...+... ...+.. .+...+...........
T Consensus 276 ~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 353 (481)
T PLN03087 276 FHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTIC 353 (481)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhh
Confidence 9999999999999999999998 8999999998654322110 0000000 000000 00000000000000000
Q ss_pred ---cc-ccChhHh---hccCCHHHH-Hhhhhccc--CCCCCHHHHHHhC------CcccccCCCcccEEEEEeCCCCCCC
Q 008049 309 ---SR-LANWEGI---KKSRSIRDF-DSHATCLV--GKFETVDTYYRNC------SSSTYVGNVSIPLLCISSLDDPVCT 372 (579)
Q Consensus 309 ---~~-~~d~~~i---~~~~sl~ef-d~~~t~~~--~g~~s~~~yy~~~------s~~~~l~~I~vPvLiI~g~dDpivp 372 (579)
.. ...++.+ .....+..+ ...+.... ..+.....+.... .......+|++|+|+|+|++|+++|
T Consensus 354 ~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP 433 (481)
T PLN03087 354 LVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIP 433 (481)
T ss_pred cccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCC
Confidence 00 0000000 000000000 00000000 0000000000000 0011234789999999999999999
Q ss_pred CCCcchHHHhcCCCEEEEEeCCCCccccc-cccccCcccHHHHHHHHHHh
Q 008049 373 VEAIPWDECRANKNVVLATTWHGGHLAFF-EGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~~~GGH~gfl-eg~~~~~~w~~~~v~eFL~~ 421 (579)
++.... .....|++++++++++||+.++ | ++..+.+.+.+|.+.
T Consensus 434 ~~~~~~-la~~iP~a~l~vI~~aGH~~~v~e----~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 434 VECSYA-VKAKVPRARVKVIDDKDHITIVVG----RQKEFARELEEIWRR 478 (481)
T ss_pred HHHHHH-HHHhCCCCEEEEeCCCCCcchhhc----CHHHHHHHHHHHhhc
Confidence 886554 5667899999999999999986 5 234588888888754
No 37
>PRK07581 hypothetical protein; Validated
Probab=99.82 E-value=3.4e-19 Score=187.09 Aligned_cols=255 Identities=17% Similarity=0.124 Sum_probs=140.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHH---HHHHhCCCeEEEEcCCCCCCCCCCCC--CCCCC------CcHHHHHHHHHHHH
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLV---FNTAKRGWNVVVSNHRGLGGVSITSD--CFYNA------GWTEDAREVIGYLH 228 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~---~~l~~~Gy~Vvv~D~RG~G~S~~~~~--~~~~~------~~~eDl~~~l~~l~ 228 (579)
..|+||++||+++++.. + ..++ ..+...+|+|+++|+||||.|+.... ..|+. ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~-~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD-N-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc-c-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 34778888887544433 3 2222 35656789999999999999864422 11221 23577777555565
Q ss_pred HHCCCCc-EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHH--------------HHH
Q 008049 229 HEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD--------------RAL 293 (579)
Q Consensus 229 ~~~p~~~-i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~--------------~~l 293 (579)
+.....+ .++|||||||.+++.++.++|+ +|.++|++++............+.....+.. ..+
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 195 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGL 195 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHH
Confidence 5555668 4799999999999999999999 8999999986543221111100000000000 000
Q ss_pred HHhHHHHHhh-hccccccccChhHhhccCCHHHH-Hhhhhccc--CCCCCHHHH----HH-----h----CCcccccCCC
Q 008049 294 TIGLQDYAQL-HEPRYSRLANWEGIKKSRSIRDF-DSHATCLV--GKFETVDTY----YR-----N----CSSSTYVGNV 356 (579)
Q Consensus 294 ~~~l~~~~~~-~~~~~~~~~d~~~i~~~~sl~ef-d~~~t~~~--~g~~s~~~y----y~-----~----~s~~~~l~~I 356 (579)
.......... ..+.+.....+... ......+. ........ ......... ++ . ......+.+|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 196 RAHARVYAGWGFSQAFYRQELWRAM-GYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHHhHHHHHHhhhcccc-ChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 0000000000 00000000000000 00000000 00000000 000011111 10 0 0123467889
Q ss_pred cccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-CCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 357 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH-GGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 357 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~-GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
++|+|+|+|++|.++|++.... .....++.+++++++ +||+.++|. +..+.+.|.+||++++.
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~-l~~~ip~a~l~~i~~~~GH~~~~~~----~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEA-EAALIPNAELRPIESIWGHLAGFGQ----NPADIAFIDAALKELLA 338 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEeCCCCCccccccC----cHHHHHHHHHHHHHHHh
Confidence 9999999999999999875543 456678899999998 899999983 33588999999998764
No 38
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.81 E-value=4.1e-19 Score=178.90 Aligned_cols=250 Identities=18% Similarity=0.148 Sum_probs=152.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-CCCC-CCcHHHHHHHHHHHHHHCCCCcE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPL 236 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~-~~~~eDl~~~l~~l~~~~p~~~i 236 (579)
...|+|+++||+.- +.-.| +.....|+.+||+|+++|+||+|.|+.+.. ..|+ .....|+..+++++. .+++
T Consensus 42 ~~gP~illlHGfPe-~wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k~ 115 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPE-SWYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKKA 115 (322)
T ss_pred CCCCEEEEEccCCc-cchhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----ccee
Confidence 67799999999954 44344 788899999999999999999999986644 2233 223468888888776 5689
Q ss_pred EEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh---hhhHHHh---h----------hHHHHHHHHHHHHhHHHH
Q 008049 237 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---IGDRFIG---R----------RLIQKIYDRALTIGLQDY 300 (579)
Q Consensus 237 ~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~---~~~~~l~---~----------~~~~~~~~~~l~~~l~~~ 300 (579)
+++||+|||+++..++..+|+ +|++.|+++.++... ....... + ......+.....+.+...
T Consensus 116 ~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~ 193 (322)
T KOG4178|consen 116 FLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKT 193 (322)
T ss_pred EEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHh
Confidence 999999999999999999999 999999999876511 0000000 0 000001111111111111
Q ss_pred HhhhccccccccC----hh-HhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCc-----ccccCCCcccEEEEEeCCCCC
Q 008049 301 AQLHEPRYSRLAN----WE-GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSS-----STYVGNVSIPLLCISSLDDPV 370 (579)
Q Consensus 301 ~~~~~~~~~~~~d----~~-~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~-----~~~l~~I~vPvLiI~g~dDpi 370 (579)
............+ .. .-.....+.-++..+ ...|+.-.-+||+.... ...+.+|++|+++|+|..|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v 271 (322)
T KOG4178|consen 194 FRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPV 271 (322)
T ss_pred hhccccCCccccCCCCCCccchhhHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCccc
Confidence 1000000000000 00 000001111122222 22334444455554322 346788999999999999999
Q ss_pred CCCCCcchHHHhcCCCE-EEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 371 CTVEAIPWDECRANKNV-VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 371 vp~~~~~~~~~~~~~~~-~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
.+.........+..++. +.++++++||+...|. +..+++.+.+|+++.
T Consensus 272 ~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~----p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 272 LPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK----PQEVNQAILGFINSF 320 (322)
T ss_pred ccchhHHHHHHHhhccccceEEecCCcccccccC----HHHHHHHHHHHHHhh
Confidence 98763222233444554 7789999999998883 345999999999875
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.81 E-value=1.1e-18 Score=180.81 Aligned_cols=126 Identities=14% Similarity=0.101 Sum_probs=88.7
Q ss_pred eEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC
Q 008049 121 RRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 121 ~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 200 (579)
....+...||..+.+.-. + +++.+.||++||+.++.... .+...+...+|+|+++|+||
T Consensus 5 ~~~~~~~~~~~~l~y~~~---g---------------~~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G 63 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQS---G---------------NPDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRG 63 (306)
T ss_pred cCCeEEcCCCcEEEEEEC---c---------------CCCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCC
Confidence 456788889888875321 1 12245689999986654432 33344545789999999999
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 201 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 201 ~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
||.|+.... .+ ....+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ ++.++|++++..
T Consensus 64 ~G~S~~~~~-~~-~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 64 CGKSTPHAC-LE-ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCCC-cc-cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 999974422 11 12345555555555555556689999999999999999999988 799999987643
No 40
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=5.4e-18 Score=182.46 Aligned_cols=244 Identities=16% Similarity=0.124 Sum_probs=152.5
Q ss_pred CCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 118 FSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 118 ~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
...++..|.+.||.++...++.|.. +...|+||++||+.+ ..+.++..++..|+++||+|+++|
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~---------------~~~~P~Vli~gG~~~-~~~~~~~~~~~~La~~Gy~vl~~D 229 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG---------------DGPFPTVLVCGGLDS-LQTDYYRLFRDYLAPRGIAMLTID 229 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC---------------CCCccEEEEeCCccc-chhhhHHHHHHHHHhCCCEEEEEC
Confidence 3567788888888788876666532 145788988888843 333333678889999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 198 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 198 ~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
+||+|.|.... ..........++++++.... +..+++++||||||++++.++..+++ +|+++|+++++.+...
T Consensus 230 ~pG~G~s~~~~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~ 304 (414)
T PRK05077 230 MPSVGFSSKWK---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLL 304 (414)
T ss_pred CCCCCCCCCCC---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhh
Confidence 99999985421 11122233457788887652 34689999999999999999998887 7999999998865321
Q ss_pred hhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccc-cC
Q 008049 276 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY-VG 354 (579)
Q Consensus 276 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~-l~ 354 (579)
......... ...+...+... .. .. ..+.+ .+...+ ..+. .. .... ..
T Consensus 305 ~~~~~~~~~-p~~~~~~la~~-------lg--~~-~~~~~---------~l~~~l----~~~s-l~-------~~~~l~~ 352 (414)
T PRK05077 305 TDPKRQQQV-PEMYLDVLASR-------LG--MH-DASDE---------ALRVEL----NRYS-LK-------VQGLLGR 352 (414)
T ss_pred cchhhhhhc-hHHHHHHHHHH-------hC--CC-CCChH---------HHHHHh----hhcc-ch-------hhhhhcc
Confidence 111000000 00010001000 00 00 00111 111110 0010 00 0011 25
Q ss_pred CCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 355 NVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 355 ~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
++++|+|+|+|++|+++|.+.... .....++.++++++++. .+++ ...+.+.+.+||+..
T Consensus 353 ~i~~PvLiI~G~~D~ivP~~~a~~-l~~~~~~~~l~~i~~~~---~~e~----~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 353 RCPTPMLSGYWKNDPFSPEEDSRL-IASSSADGKLLEIPFKP---VYRN----FDKALQEISDWLEDR 412 (414)
T ss_pred CCCCcEEEEecCCCCCCCHHHHHH-HHHhCCCCeEEEccCCC---ccCC----HHHHHHHHHHHHHHH
Confidence 799999999999999999886653 45667889999999863 3342 234788999999765
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=1.1e-17 Score=179.70 Aligned_cols=260 Identities=13% Similarity=0.103 Sum_probs=137.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHH-HHHHHHHHHHHHCCCCcEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTE-DAREVIGYLHHEYPKAPLF 237 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~e-Dl~~~l~~l~~~~p~~~i~ 237 (579)
.++|+||++||+++ +...| ...+..|.+ +|+|+++|+||||.|+............+ ++.+.+..+.+.....+++
T Consensus 103 ~~~p~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~ 179 (402)
T PLN02894 103 EDAPTLVMVHGYGA-SQGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFI 179 (402)
T ss_pred CCCCEEEEECCCCc-chhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 45689999999954 44445 355677765 69999999999999865321111111111 2222222222333455899
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH---HHhh---hHHHHHHHHH---------HHHhHH----
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR---FIGR---RLIQKIYDRA---------LTIGLQ---- 298 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~---~l~~---~~~~~~~~~~---------l~~~l~---- 298 (579)
++||||||.+++.++.++++ ++.++|+++++........ .+.. .+...+.... +...+.
T Consensus 180 lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~ 257 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPE--HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGP 257 (402)
T ss_pred EEEECHHHHHHHHHHHhCch--hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhH
Confidence 99999999999999999988 8999999986432211111 0100 0000000000 000000
Q ss_pred HHHhhhc-cccccccChhHhhccCCHHHHHhhhhcccCCCCCHH---HH------HHhCCcccccCCCcccEEEEEeCCC
Q 008049 299 DYAQLHE-PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD---TY------YRNCSSSTYVGNVSIPLLCISSLDD 368 (579)
Q Consensus 299 ~~~~~~~-~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~---~y------y~~~s~~~~l~~I~vPvLiI~g~dD 368 (579)
....... ..+....+...+ .......+.+.+......-.+.. .+ ....+....+.+|++|+++|+|++|
T Consensus 258 ~l~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D 336 (402)
T PLN02894 258 NLVRRYTTARFGAHSTGDIL-SEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHD 336 (402)
T ss_pred HHHHHHHHHHhhhccccccc-CcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCC
Confidence 0000000 000000000000 00000111111100000000000 00 0111223457889999999999999
Q ss_pred CCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCCCccc
Q 008049 369 PVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMH 429 (579)
Q Consensus 369 pivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~~~~~ 429 (579)
.+.+.. .........+++++++++++||+.+.|. |+ -+.+.|.+|++.++.....+
T Consensus 337 ~i~~~~-~~~~~~~~~~~~~~~~i~~aGH~~~~E~--P~--~f~~~l~~~~~~~~~~~~~~ 392 (402)
T PLN02894 337 WMNYEG-AVEARKRMKVPCEIIRVPQGGHFVFLDN--PS--GFHSAVLYACRKYLSPDREE 392 (402)
T ss_pred CCCcHH-HHHHHHHcCCCCcEEEeCCCCCeeeccC--HH--HHHHHHHHHHHHhccCCchh
Confidence 877633 2222333345688999999999999993 33 49999999999987764443
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=1.1e-17 Score=169.03 Aligned_cols=302 Identities=16% Similarity=0.144 Sum_probs=168.3
Q ss_pred cccCCCCCcch--hHhhhhhhhcCCCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCC
Q 008049 93 YLVTPWLSSPH--IQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGL 170 (579)
Q Consensus 93 y~p~~wl~~gh--lQT~~~~~~~~~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl 170 (579)
+.|+.|+...+ ++++-...+... .++|..+.+..+++..+- ...-... +.+++.+|++||+
T Consensus 37 ~~~~~w~~~~~~~l~~~e~ril~~~-~v~~~~~~v~i~~~~~iw---~~~~~~~-------------~~~~~plVliHGy 99 (365)
T KOG4409|consen 37 WLPTLWCSTSRDQLKEAEKRILSSV-PVPYSKKYVRIPNGIEIW---TITVSNE-------------SANKTPLVLIHGY 99 (365)
T ss_pred cCCcccccchHHHHHHHHHhhhhhc-CCCcceeeeecCCCceeE---EEeeccc-------------ccCCCcEEEEecc
Confidence 44556776544 665544443332 468888888888665552 2211111 2445568899999
Q ss_pred CCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHH
Q 008049 171 TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVK 250 (579)
Q Consensus 171 ~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ 250 (579)
+++.. .|++.+ +.|++ .++|+++|++|+|.|+.+.-..-.......+.+.++..+...+-.+++++|||+||.++..
T Consensus 100 GAg~g-~f~~Nf-~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~ 176 (365)
T KOG4409|consen 100 GAGLG-LFFRNF-DDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAK 176 (365)
T ss_pred chhHH-HHHHhh-hhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHH
Confidence 66555 454544 55555 7999999999999997653322223334567777777777777789999999999999999
Q ss_pred HHhhcCCCCCccEEEEEcCCcChhhh--hHHHhhhHHHHHHHHHHH-----Hh---HHHHHhhhccccccccChhHhhcc
Q 008049 251 YLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALT-----IG---LQDYAQLHEPRYSRLANWEGIKKS 320 (579)
Q Consensus 251 ya~~~~~~~~v~a~V~is~p~d~~~~--~~~l~~~~~~~~~~~~l~-----~~---l~~~~~~~~~~~~~~~d~~~i~~~ 320 (579)
||.++|+ +|..+|+++|-.-.... .....+.. ...+ +.+. .+ +.+.+....+.+......+...+.
T Consensus 177 YAlKyPe--rV~kLiLvsP~Gf~~~~~~~~~~~~~~-~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~ 252 (365)
T KOG4409|consen 177 YALKYPE--RVEKLILVSPWGFPEKPDSEPEFTKPP-PEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKF 252 (365)
T ss_pred HHHhChH--hhceEEEecccccccCCCcchhhcCCC-hHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhc
Confidence 9999999 89999999863211111 00000000 0000 0000 00 000000001111000001111111
Q ss_pred CC--HHHH-HhhhhcccCCCCCHHHHHHh---------CCcccccCCCc--ccEEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008049 321 RS--IRDF-DSHATCLVGKFETVDTYYRN---------CSSSTYVGNVS--IPLLCISSLDDPVCTVEAIPWDECRANKN 386 (579)
Q Consensus 321 ~s--l~ef-d~~~t~~~~g~~s~~~yy~~---------~s~~~~l~~I~--vPvLiI~g~dDpivp~~~~~~~~~~~~~~ 386 (579)
.+ -.++ -+.+......-.+.+..+.. ....+.+..++ +|+++|+|++|-+--..............
T Consensus 253 ~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~ 332 (365)
T KOG4409|consen 253 PSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEY 332 (365)
T ss_pred cccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhccc
Confidence 10 1111 11211111111222222111 11224455555 99999999999765544333222235667
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 387 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 387 ~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
++.++++++||..|+++ |+ -+++.|.++++..
T Consensus 333 ~~~~~v~~aGHhvylDn--p~--~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 333 VEIIIVPGAGHHVYLDN--PE--FFNQIVLEECDKV 364 (365)
T ss_pred ceEEEecCCCceeecCC--HH--HHHHHHHHHHhcc
Confidence 89999999999999984 33 4899999888653
No 43
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.78 E-value=2.2e-18 Score=179.41 Aligned_cols=277 Identities=19% Similarity=0.179 Sum_probs=159.0
Q ss_pred eEEEEEcCCCc-EEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcC
Q 008049 121 RRQLFRLSDGG-MIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNH 198 (579)
Q Consensus 121 ~r~~l~~~DGg-~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~ 198 (579)
+...+..+.|. ++...|+...... ..+++.++|.||++||+.+ +...| +..+..+.+. |++|+++|.
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~---------~~~~~~~~~pvlllHGF~~-~~~~w-~~~~~~L~~~~~~~v~aiDl 94 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKY---------GSPGDKDKPPVLLLHGFGA-SSFSW-RRVVPLLSKAKGLRVLAIDL 94 (326)
T ss_pred cceEEEcccCCceeEEEEeccceec---------cCCCCCCCCcEEEeccccC-CcccH-hhhccccccccceEEEEEec
Confidence 44455666664 7777887653210 0011246778999999965 44445 7778777765 699999999
Q ss_pred CCCC-CCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEE---EEcCCcChh
Q 008049 199 RGLG-GVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA---AICSPWDLL 274 (579)
Q Consensus 199 RG~G-~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V---~is~p~d~~ 274 (579)
.|+| .|+......|. ..+....+..+...+...++.++||||||.+++.+|+.+|+ .|+++| +++++....
T Consensus 95 ~G~g~~s~~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 95 PGHGYSSPLPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYST 169 (326)
T ss_pred CCCCcCCCCCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccC
Confidence 9999 44443333332 35566666666666667789999999999999999999999 899999 677665443
Q ss_pred hhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccc--cccccChhHh-----hccCCHHHHHhhhhccc--CCCC----CHH
Q 008049 275 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR--YSRLANWEGI-----KKSRSIRDFDSHATCLV--GKFE----TVD 341 (579)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~d~~~i-----~~~~sl~efd~~~t~~~--~g~~----s~~ 341 (579)
.............+... ..+........+. +.... ...+ ........+........ ...+ +..
T Consensus 170 ~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSA---LELLIPLSLTEPVRLVSEGL-LRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLF 245 (326)
T ss_pred CcchhHHHHhhhhhccH---hhhcCccccccchhheeHhh-hcceeeeccccccchhhhhhheecccccchhhhheeeEE
Confidence 32211111111100000 0000000000000 00000 0000 00011111111111110 0000 000
Q ss_pred HHHH--hCCcccccCCCc-ccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHH
Q 008049 342 TYYR--NCSSSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEY 418 (579)
Q Consensus 342 ~yy~--~~s~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eF 418 (579)
.+.. .......+.+|. +|+|+++|..|+++|.+... ...+.+||+++++++++||+.+.|. |+ .+.+.+..|
T Consensus 246 ~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~-~~~~~~pn~~~~~I~~~gH~~h~e~--Pe--~~~~~i~~F 320 (326)
T KOG1454|consen 246 LELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAE-ELKKKLPNAELVEIPGAGHLPHLER--PE--EVAALLRSF 320 (326)
T ss_pred EeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHH-HHHhhCCCceEEEeCCCCcccccCC--HH--HHHHHHHHH
Confidence 0000 122234567776 99999999999999998433 3455569999999999999999983 33 488999999
Q ss_pred HHhh
Q 008049 419 LGVL 422 (579)
Q Consensus 419 L~~~ 422 (579)
+...
T Consensus 321 i~~~ 324 (326)
T KOG1454|consen 321 IARL 324 (326)
T ss_pred HHHh
Confidence 8765
No 44
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.78 E-value=1.9e-18 Score=181.86 Aligned_cols=231 Identities=12% Similarity=0.041 Sum_probs=124.0
Q ss_pred HHHHH---HHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc-EEEEEEchhHHHHHHHHhhc
Q 008049 180 RHLVF---NTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEE 255 (579)
Q Consensus 180 ~~l~~---~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~-i~lvG~SlGG~ial~ya~~~ 255 (579)
..++. .|...+|+|+++|+||||.|... + .......+|+.++++.+. ..+ ++++||||||++++.++.++
T Consensus 86 ~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-~-~~~~~~a~dl~~ll~~l~----l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 86 EGLVGSGRALDPARFRLLAFDFIGADGSLDV-P-IDTADQADAIALLLDALG----IARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred hhccCCCCccCccccEEEEEeCCCCCCCCCC-C-CCHHHHHHHHHHHHHHcC----CCcceEEEEECHHHHHHHHHHHHC
Confidence 56665 45445899999999999987432 1 111234566666666553 334 57999999999999999999
Q ss_pred CCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHH----------HH-HHHHh--HHHH--HhhhccccccccChhHhhcc
Q 008049 256 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY----------DR-ALTIG--LQDY--AQLHEPRYSRLANWEGIKKS 320 (579)
Q Consensus 256 ~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~----------~~-~l~~~--l~~~--~~~~~~~~~~~~d~~~i~~~ 320 (579)
|+ +|.++|++++............ ....... .. ..... +..+ .......+........-...
T Consensus 160 P~--~V~~LvLi~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (343)
T PRK08775 160 PA--RVRTLVVVSGAHRAHPYAAAWR-ALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVR 236 (343)
T ss_pred hH--hhheEEEECccccCCHHHHHHH-HHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCcc
Confidence 98 8999999987654321110000 0000000 00 00000 0000 00000000000000000000
Q ss_pred CCHHHHHh----hhhcccCCCCCHHHHHHhCC-cccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-
Q 008049 321 RSIRDFDS----HATCLVGKFETVDTYYRNCS-SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH- 394 (579)
Q Consensus 321 ~sl~efd~----~~t~~~~g~~s~~~yy~~~s-~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~- 394 (579)
.....+-. ..... ..........+... ....+.+|++|+|+|+|++|.++|.+..........++.+++++++
T Consensus 237 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~ 315 (343)
T PRK08775 237 VAAEDYLDAAGAQYVAR-TPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSP 315 (343)
T ss_pred chHHHHHHHHHHHHHHh-cChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCC
Confidence 00010000 00000 00001111111111 1124688999999999999999997754443333447899999985
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 395 GGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 395 GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
+||+.++|. +..+.+.+.+||++..+
T Consensus 316 aGH~~~lE~----Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 316 YGHDAFLKE----TDRIDAILTTALRSTGE 341 (343)
T ss_pred ccHHHHhcC----HHHHHHHHHHHHHhccc
Confidence 999999993 34699999999987654
No 45
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=2.2e-17 Score=168.48 Aligned_cols=237 Identities=16% Similarity=0.102 Sum_probs=136.3
Q ss_pred CcEEEEECCCCCCCc--cHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEE
Q 008049 161 TPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLF 237 (579)
Q Consensus 161 ~PiVlllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p-~~~i~ 237 (579)
++.||++||.++... ......+++.|+++||+|+++|+||||.|+... .....+.+|+.++++++++..+ ..+++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i~ 103 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRRIV 103 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCcEE
Confidence 355777777543221 112357889999999999999999999986432 1223466899999999988764 35799
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHh
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 317 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i 317 (579)
++||||||.+++.++... . +|+++|++++++........ . .....|...+... .+... .+....+...+
T Consensus 104 l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~~~~~~~~~~--~-~~~~~~~~~~~~~--~~~~~---~~~g~~~~~~~ 172 (274)
T TIGR03100 104 AWGLCDAASAALLYAPAD-L--RVAGLVLLNPWVRTEAAQAA--S-RIRHYYLGQLLSA--DFWRK---LLSGEVNLGSS 172 (274)
T ss_pred EEEECHHHHHHHHHhhhC-C--CccEEEEECCccCCcccchH--H-HHHHHHHHHHhCh--HHHHH---hcCCCccHHHH
Confidence 999999999999887643 3 69999999987543221100 0 1111222111111 11110 01111111111
Q ss_pred hccCCHHHHHhhhh-c-ccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCC------cchHHHhcCCCEEE
Q 008049 318 KKSRSIRDFDSHAT-C-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA------IPWDECRANKNVVL 389 (579)
Q Consensus 318 ~~~~sl~efd~~~t-~-~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~------~~~~~~~~~~~~~l 389 (579)
. ..+..... . ........... .......+..+++|+|+++|..|+..+.-. ..+.....++++++
T Consensus 173 ~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~ 245 (274)
T TIGR03100 173 L-----RGLGDALLKARQKGDEVAHGGL--AERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIER 245 (274)
T ss_pred H-----HHHHHHHHhhhhcCCCcccchH--HHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEE
Confidence 1 01111000 0 00000000000 001123566789999999999998864210 11111124589999
Q ss_pred EEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 390 ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 390 ~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
+.++++||+...| ..+..+.+.|.+||+
T Consensus 246 ~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 246 VEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred EecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 9999999976565 334568899999985
No 46
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.77 E-value=3.6e-17 Score=173.93 Aligned_cols=239 Identities=13% Similarity=0.103 Sum_probs=134.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCC---CCC-CCcHHHHHHHHHHHHHHCCCCc
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC---FYN-AGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~---~~~-~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
.+|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+..... .|+ ..+++|+.++++.+. ..+
T Consensus 126 ~~~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPS-QAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDK 198 (383)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCC
Confidence 4578999999954 44455 778888865 899999999999999765331 122 234566666666653 357
Q ss_pred EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhh--hHHHhhhHHHHHHHHHHHH-hHHHHHhhhcccccccc
Q 008049 236 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI-GLQDYAQLHEPRYSRLA 312 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~--~~~l~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~~~~ 312 (579)
++++|||+||.+++.++.++|+ +|.++|+++++...... ...+. .+...+....+.. .+...............
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~~~~~~~p~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLTKEHAKLPSTLS-EFSNFLLGEIFSQDPLRASDKALTSCGPYAM 275 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCccccccchHHHH-HHHHHHhhhhhhcchHHHHhhhhcccCccCC
Confidence 9999999999999999999998 89999999987532110 00000 0000000000000 00000000000000000
Q ss_pred ChhHhhccCCHHHHHhhhhccc-CC---------C-CCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHH
Q 008049 313 NWEGIKKSRSIRDFDSHATCLV-GK---------F-ETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC 381 (579)
Q Consensus 313 d~~~i~~~~sl~efd~~~t~~~-~g---------~-~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~ 381 (579)
..+. ...+...+.... .+ + .....+...........+|++|+|+|+|++|++++.+.... .+
T Consensus 276 ~~e~------~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~-~a 348 (383)
T PLN03084 276 KEDD------AMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED-FC 348 (383)
T ss_pred CHHH------HHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH-HH
Confidence 0000 000000000000 00 0 00000100000000114689999999999999998875443 33
Q ss_pred hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 382 RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 382 ~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
.. .+.++.+++++||+.+.|. | ..+.+.|.+||.
T Consensus 349 ~~-~~a~l~vIp~aGH~~~~E~--P--e~v~~~I~~Fl~ 382 (383)
T PLN03084 349 KS-SQHKLIELPMAGHHVQEDC--G--EELGGIISGILS 382 (383)
T ss_pred Hh-cCCeEEEECCCCCCcchhC--H--HHHHHHHHHHhh
Confidence 33 4789999999999999883 3 358888988875
No 47
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.77 E-value=9.7e-18 Score=157.71 Aligned_cols=230 Identities=17% Similarity=0.246 Sum_probs=157.4
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHH-HHHhCCCeEEE
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVF-NTAKRGWNVVV 195 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~-~l~~~Gy~Vvv 195 (579)
.++|+|..+.++|..++...|... ..++|+++++||..|+..... ..+. .....+.+|+.
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~-----------------E~S~pTlLyfh~NAGNmGhr~--~i~~~fy~~l~mnv~i 111 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS-----------------ESSRPTLLYFHANAGNMGHRL--PIARVFYVNLKMNVLI 111 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc-----------------cCCCceEEEEccCCCcccchh--hHHHHHHHHcCceEEE
Confidence 479999999999999887666642 147899999999988765432 2333 34556899999
Q ss_pred EcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 196 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 196 ~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
+++||+|.|++.+. ..|..-|.+++++|+..+. .+.++++.|.|+||.+++..+++..+ ++.++++-..-...
T Consensus 112 vsYRGYG~S~Gsps---E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 112 VSYRGYGKSEGSPS---EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSI 186 (300)
T ss_pred EEeeccccCCCCcc---ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccc
Confidence 99999999986643 4567789999999998764 46789999999999999999999887 78877755322111
Q ss_pred hhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCccccc
Q 008049 274 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 353 (579)
Q Consensus 274 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l 353 (579)
.... + ....... .++ +..+. +++ ...+...+
T Consensus 187 p~~~--i---------~~v~p~~-~k~----------------------i~~lc---------~kn------~~~S~~ki 217 (300)
T KOG4391|consen 187 PHMA--I---------PLVFPFP-MKY----------------------IPLLC---------YKN------KWLSYRKI 217 (300)
T ss_pred hhhh--h---------heeccch-hhH----------------------HHHHH---------HHh------hhcchhhh
Confidence 0000 0 0000000 000 00000 000 11233456
Q ss_pred CCCcccEEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 354 GNVSIPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 354 ~~I~vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
.+.++|.|+|.|..|.+||+..+... ....+.++++..+|+|.|..-.- .+. +-+++.+||.++..
T Consensus 218 ~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i---~dG--Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 218 GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI---CDG--YFQAIEDFLAEVVK 284 (300)
T ss_pred ccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE---ecc--HHHHHHHHHHHhcc
Confidence 67789999999999999999765432 22345678899999999975332 122 66899999988755
No 48
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.77 E-value=2.2e-17 Score=174.76 Aligned_cols=239 Identities=15% Similarity=0.104 Sum_probs=133.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
.+.|+||++||++++.. .| ..++..|.+ +|+|+++|+||||.|...... ...+|+.+.+..+....+..++++
T Consensus 129 ~~~~~vl~~HG~~~~~~-~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 201 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN-NW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHL 201 (371)
T ss_pred CCCCeEEEECCCCCccc-hH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEE
Confidence 34578999999965444 44 567777765 599999999999998543221 223555555555555666568999
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhh
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 318 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~ 318 (579)
+||||||.+++.++..+++ ++.++|+++++.........+...+........+...+...... ...+.. .......
T Consensus 202 vG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 277 (371)
T PRK14875 202 VGHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFAD-PALVTR-QMVEDLL 277 (371)
T ss_pred EeechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcC-hhhCCH-HHHHHHH
Confidence 9999999999999999887 79999999876432211111000000000000000000000000 000000 0000000
Q ss_pred c---cCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC
Q 008049 319 K---SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 395 (579)
Q Consensus 319 ~---~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G 395 (579)
. ..........+... .+... ....+....+.++++|+|+++|++|+++|.+.. ....+++.+.+++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~----~~l~~~~~~~~~~~~ 348 (371)
T PRK14875 278 KYKRLDGVDDALRALADA--LFAGG---RQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA----QGLPDGVAVHVLPGA 348 (371)
T ss_pred HHhccccHHHHHHHHHHH--hccCc---ccchhHHHHHhcCCCCEEEEEECCCCccCHHHH----hhccCCCeEEEeCCC
Confidence 0 00000000000000 00000 000112235678899999999999999986532 223457899999999
Q ss_pred CccccccccccCcccHHHHHHHHHHh
Q 008049 396 GHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 396 GH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
||+.+++. +.++.+.|.+||+.
T Consensus 349 gH~~~~e~----p~~~~~~i~~fl~~ 370 (371)
T PRK14875 349 GHMPQMEA----AADVNRLLAEFLGK 370 (371)
T ss_pred CCChhhhC----HHHHHHHHHHHhcc
Confidence 99999883 34688888888864
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.77 E-value=5.4e-18 Score=179.01 Aligned_cols=111 Identities=18% Similarity=0.167 Sum_probs=76.2
Q ss_pred CcEEEEECCCCCCCccH---------HHHHHH---HHHHhCCCeEEEEcCCC--CCCCCCCC----CCCCC----CCcHH
Q 008049 161 TPIAIVIPGLTSDSAAS---------YIRHLV---FNTAKRGWNVVVSNHRG--LGGVSITS----DCFYN----AGWTE 218 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~---------yi~~l~---~~l~~~Gy~Vvv~D~RG--~G~S~~~~----~~~~~----~~~~e 218 (579)
.|+||++||+++++... |+..++ ..+..++|+|+++|+|| ||.|...+ ...+. ....+
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999997765431 335554 25656799999999999 45443211 11111 11234
Q ss_pred HHHHHHHHHHHHCCCCc-EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 219 DAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 219 Dl~~~l~~l~~~~p~~~-i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
|+.+.+..+.+.....+ ++++||||||.+++.++.++|+ +|+++|+++++...
T Consensus 111 ~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 111 DDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCcC
Confidence 55544444444555567 9999999999999999999998 89999999986543
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.75 E-value=3.6e-17 Score=183.33 Aligned_cols=270 Identities=17% Similarity=0.175 Sum_probs=144.5
Q ss_pred EEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 008049 123 QLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 202 (579)
Q Consensus 123 ~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 202 (579)
+.+...||..+++.++.+ +++|+|||+||+.++ ...| ..+...| ..||+|+++|+||||
T Consensus 5 ~~~~~~~g~~l~~~~~g~------------------~~~~~ivllHG~~~~-~~~w-~~~~~~L-~~~~~Vi~~D~~G~G 63 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD------------------PDRPTVVLVHGYPDN-HEVW-DGVAPLL-ADRFRVVAYDVRGAG 63 (582)
T ss_pred EEEEeeCCEEEEEEEcCC------------------CCCCeEEEEcCCCch-HHHH-HHHHHHh-hcceEEEEecCCCCC
Confidence 455667898888766532 235789999999544 4344 6788888 568999999999999
Q ss_pred CCCCCCC-CCC-CCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHH
Q 008049 203 GVSITSD-CFY-NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 280 (579)
Q Consensus 203 ~S~~~~~-~~~-~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l 280 (579)
.|+.... ..+ ...+.+|+.++++++. ...+++++||||||.+++.++.+......+..++.++.+.... ...+.
T Consensus 64 ~S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~-~~~~~ 139 (582)
T PRK05855 64 RSSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH-VGFWL 139 (582)
T ss_pred CCCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH-HHHHH
Confidence 9975432 222 2345677777777653 2346999999999999988877632222455555555543111 00000
Q ss_pred hhhH---HHHHHHHHHHHhHHHHHh--hhccccccc-----c--ChhH-hhccC--CHHHHHhhhhcccCCCCCHHHH--
Q 008049 281 GRRL---IQKIYDRALTIGLQDYAQ--LHEPRYSRL-----A--NWEG-IKKSR--SIRDFDSHATCLVGKFETVDTY-- 343 (579)
Q Consensus 281 ~~~~---~~~~~~~~l~~~l~~~~~--~~~~~~~~~-----~--d~~~-i~~~~--sl~efd~~~t~~~~g~~s~~~y-- 343 (579)
.... ........+......... ...+.+... . .+.. ..... ........... .........+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 218 (582)
T PRK05855 140 RSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL-SDGAHGVKLYRA 218 (582)
T ss_pred hhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-ccccchHHHHHh
Confidence 0000 000000000000000000 000000000 0 0000 00000 00000000000 0000111111
Q ss_pred -HHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 344 -YRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 344 -y~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
+........+..+++|+|+|+|++|+++|.+.... .....++..+.+++ +||+.++|. +..+.+.+.+|++..
T Consensus 219 ~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e~----p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 219 NMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDD-LSRWVPRLWRREIK-AGHWLPMSH----PQVLAAAVAEFVDAV 292 (582)
T ss_pred hhhhhhccCccCCccCceEEEEeCCCcccCHHHhcc-ccccCCcceEEEcc-CCCcchhhC----hhHHHHHHHHHHHhc
Confidence 11111122355689999999999999999875543 33445677777775 799999983 345899999999886
Q ss_pred cC
Q 008049 423 HS 424 (579)
Q Consensus 423 ~~ 424 (579)
..
T Consensus 293 ~~ 294 (582)
T PRK05855 293 EG 294 (582)
T ss_pred cC
Confidence 54
No 51
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.75 E-value=4e-17 Score=166.43 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=78.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
..+|.|||+||+.+++ ..| ..++..|.++||+|+++|+||||.|....... .++.++...+.+.+.......++++
T Consensus 16 ~~~p~vvliHG~~~~~-~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSV--TTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCCCc-CcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccC--CCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4568899999996544 445 78888998889999999999999875332221 2233444444455544323468999
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
+||||||.++..++..+++ +|.++|++++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999988887 79999999763
No 52
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.74 E-value=7.2e-17 Score=172.24 Aligned_cols=107 Identities=18% Similarity=0.219 Sum_probs=73.6
Q ss_pred CCcEEEEECCCCCCCccH-----------HHHHHHH---HHHhCCCeEEEEcCCC-CCCCCCCCC------C-------C
Q 008049 160 TTPIAIVIPGLTSDSAAS-----------YIRHLVF---NTAKRGWNVVVSNHRG-LGGVSITSD------C-------F 211 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~-----------yi~~l~~---~l~~~Gy~Vvv~D~RG-~G~S~~~~~------~-------~ 211 (579)
.+|.||++||+++++... |+..++. .+...+|+|+++|++| +|+|...+. . .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 368899999998766531 2355542 4445689999999999 455533211 0 1
Q ss_pred CC-CCcHHHHHHHHHHHHHHCCCCc-EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 212 YN-AGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 212 ~~-~~~~eDl~~~l~~l~~~~p~~~-i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
|+ ..+.+|+.++++.+ +..+ .+++||||||.+++.++.++|+ +|.++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 11 12334555555444 4456 5899999999999999999998 8999999987654
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.73 E-value=3.3e-17 Score=172.96 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=85.3
Q ss_pred cEEEEECCCCCCCccHH---HHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHCCCCcEE
Q 008049 162 PIAIVIPGLTSDSAASY---IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPLF 237 (579)
Q Consensus 162 PiVlllHGl~G~s~~~y---i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-eDl~~~l~~l~~~~p~~~i~ 237 (579)
+.||++||+........ .+.+++.|+++||+|+++|+||+|.+.... ....+. +|+.++++++.+..+..+++
T Consensus 63 ~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~~~~~~v~~l~~~~~~~~i~ 139 (350)
T TIGR01836 63 TPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYINGYIDKCVDYICRTSKLDQIS 139 (350)
T ss_pred CcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 34899999843221100 157899999999999999999998764221 112233 46889999999998888999
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
++||||||.+++.|++.+++ +++++|++++|+++..
T Consensus 140 lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 140 LLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFET 175 (350)
T ss_pred EEEECHHHHHHHHHHHhCch--heeeEEEeccccccCC
Confidence 99999999999999999887 7999999999988643
No 54
>PRK10566 esterase; Provisional
Probab=99.72 E-value=4.1e-16 Score=156.00 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=125.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCC-CCC------CcHHHHHHHHHHHHHHC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF-YNA------GWTEDAREVIGYLHHEY 231 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~-~~~------~~~eDl~~~l~~l~~~~ 231 (579)
...|+||++||++++ ...| ..++..|+++||+|+++|+||||.+....+.. ... ...+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSS-KLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcc-cchH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456899999999654 3444 67899999999999999999999753211111 100 12467888888887653
Q ss_pred --CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccc
Q 008049 232 --PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYS 309 (579)
Q Consensus 232 --p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 309 (579)
...+++++||||||.+++.++..+++ +.+.+.+..+.... .+... + . .....
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~-~-------~---~~~~~ 156 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFT------------SLART-L-------F---PPLIP 156 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHH------------HHHHH-h-------c---ccccc
Confidence 35689999999999999998888765 55555443221110 00000 0 0 00000
Q ss_pred cccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCC-cccEEEEEeCCCCCCCCCCcchHHH--hcC--
Q 008049 310 RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV-SIPLLCISSLDDPVCTVEAIPWDEC--RAN-- 384 (579)
Q Consensus 310 ~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I-~vPvLiI~g~dDpivp~~~~~~~~~--~~~-- 384 (579)
. . ......+.... ......+....+.++ ++|+|+++|++|+++|++....... ...
T Consensus 157 ~-~-------~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 157 E-T-------AAQQAEFNNIV-----------APLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred c-c-------cccHHHHHHHH-----------HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 0 0 00011111110 001111223445666 7999999999999999875433211 111
Q ss_pred -CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 385 -KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 385 -~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
.++++..++++||... + -..+.+.+||+..
T Consensus 218 ~~~~~~~~~~~~~H~~~-----~---~~~~~~~~fl~~~ 248 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT-----P---EALDAGVAFFRQH 248 (249)
T ss_pred CcceEEEecCCCCCccC-----H---HHHHHHHHHHHhh
Confidence 2478888999999632 1 1568899999853
No 55
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.71 E-value=3.1e-16 Score=153.00 Aligned_cols=195 Identities=17% Similarity=0.138 Sum_probs=138.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC-CCCcEE
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLF 237 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~-p~~~i~ 237 (579)
..++++++||...+-.... .+...+.. -+++++.+|++|+|.|+++.... +..+|+.++.+++++++ +.++|+
T Consensus 59 ~~~~lly~hGNa~Dlgq~~--~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~---n~y~Di~avye~Lr~~~g~~~~Ii 133 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMV--ELFKELSIFLNCNVVSYDYSGYGRSSGKPSER---NLYADIKAVYEWLRNRYGSPERII 133 (258)
T ss_pred cceEEEEcCCcccchHHHH--HHHHHHhhcccceEEEEecccccccCCCcccc---cchhhHHHHHHHHHhhcCCCceEE
Confidence 4589999999855544322 33334433 48999999999999998775543 56799999999999999 588999
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHh
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 317 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i 317 (579)
++|+|+|+..++.+|++.+ +.|+|+.+|-.+.... +++ + .
T Consensus 134 l~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv-----------~~~-------------~--~---------- 173 (258)
T KOG1552|consen 134 LYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRV-----------AFP-------------D--T---------- 173 (258)
T ss_pred EEEecCCchhhhhHhhcCC----cceEEEeccchhhhhh-----------hcc-------------C--c----------
Confidence 9999999999999999875 7788988764332100 000 0 0
Q ss_pred hccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008049 318 KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 397 (579)
Q Consensus 318 ~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 397 (579)
.++ .-|| .....+.+..|++|+|++||.||++++..+-........+..+-.+..++||
T Consensus 174 --~~~-~~~d------------------~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH 232 (258)
T KOG1552|consen 174 --KTT-YCFD------------------AFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGH 232 (258)
T ss_pred --ceE-Eeec------------------cccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCC
Confidence 000 0000 1111577889999999999999999999876554333444457788899999
Q ss_pred cccccccccCcccHHHHHHHHHHhhcCC
Q 008049 398 LAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 398 ~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
....-. ..+.+.+.+|+..+...
T Consensus 233 ~~~~~~-----~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 233 NDIELY-----PEYIEHLRRFISSVLPS 255 (258)
T ss_pred cccccC-----HHHHHHHHHHHHHhccc
Confidence 764431 14778899999887654
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.71 E-value=7.9e-17 Score=157.34 Aligned_cols=209 Identities=22% Similarity=0.247 Sum_probs=124.2
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 191 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 191 y~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
|+|+++|+||+|.|+............+|+.+.++.+.+..+..+++++||||||.+++.|++++|+ +|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 6899999999999973101223334468999999999999888889999999999999999999999 99999999886
Q ss_pred c--ChhhhhHHHhh-hHHHHHHHHH---HHHhHHHHHhhhc---ccccc--ccChhHhhccCCHHHHHhhhhcccCCCCC
Q 008049 271 W--DLLIGDRFIGR-RLIQKIYDRA---LTIGLQDYAQLHE---PRYSR--LANWEGIKKSRSIRDFDSHATCLVGKFET 339 (579)
Q Consensus 271 ~--d~~~~~~~l~~-~~~~~~~~~~---l~~~l~~~~~~~~---~~~~~--~~d~~~i~~~~sl~efd~~~t~~~~g~~s 339 (579)
. ........... .......... ............. ..... ..+............+.... .....+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 157 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETD-AFDNMFWN 157 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHH-HHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHH-HHhhhccc
Confidence 2 11111111110 0000000000 0000000000000 00000 00000000000000000000 00000002
Q ss_pred HHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008049 340 VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 403 (579)
Q Consensus 340 ~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg 403 (579)
...++........+.+|++|+|+++|++|+++|++.... .....|+.++++++++||+.++++
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHS
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcC
Confidence 334455555566788899999999999999999886655 677889999999999999999985
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.68 E-value=4.8e-15 Score=182.71 Aligned_cols=249 Identities=15% Similarity=0.149 Sum_probs=135.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCC----CCCCCcHHHHHHHHHHHHHHCCCC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEYPKA 234 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~----~~~~~~~eDl~~~l~~l~~~~p~~ 234 (579)
+.+|+|||+||+++++. .| ..++..|.+ +|+|+++|+||||.|...... .......+++.+.+..+.+.....
T Consensus 1369 ~~~~~vVllHG~~~s~~-~w-~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~ 1445 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGE-DW-IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG 1445 (1655)
T ss_pred CCCCeEEEECCCCCCHH-HH-HHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC
Confidence 34578999999966554 45 678887765 699999999999998653210 000112344444333333333456
Q ss_pred cEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhh-HHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccC
Q 008049 235 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 313 (579)
Q Consensus 235 ~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~-~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d 313 (579)
+++++||||||.+++.++.++|+ +|.++|++++........ ..+................+..+...... . ..
T Consensus 1446 ~v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~-~~ 1519 (1655)
T PLN02980 1446 KVTLVGYSMGARIALYMALRFSD--KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYS---G-EL 1519 (1655)
T ss_pred CEEEEEECHHHHHHHHHHHhChH--hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhcc---H-HH
Confidence 89999999999999999999998 899999998643221110 00000000000000000011111110000 0 00
Q ss_pred hhHhhccCCHHHHHhhhhcccC--CCCCHHHHHH------hCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCC
Q 008049 314 WEGIKKSRSIRDFDSHATCLVG--KFETVDTYYR------NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 385 (579)
Q Consensus 314 ~~~i~~~~sl~efd~~~t~~~~--g~~s~~~yy~------~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 385 (579)
+... .....+...+..... ........+. ..+....+.+|++|+|+|+|++|++++ +.... .....+
T Consensus 1520 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~-~~~~i~ 1594 (1655)
T PLN02980 1520 WKSL---RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQK-MYREIG 1594 (1655)
T ss_pred hhhh---ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHH-HHHHcc
Confidence 0000 000000000000000 0000011111 111224688999999999999999875 22222 232222
Q ss_pred ------------CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 386 ------------NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 386 ------------~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
.+++++++++||+.++|. +..+.+.|.+||+....+
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~----Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLEN----PLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHC----HHHHHHHHHHHHHhcccc
Confidence 268999999999999993 335999999999986543
No 58
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=4.3e-16 Score=157.25 Aligned_cols=244 Identities=17% Similarity=0.184 Sum_probs=149.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 237 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~ 237 (579)
.+.|.++++||+.|+. ..| +.+...|++. |-.++++|.|-||.|+......|. ..++|+..+++..+..+...++.
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCC-CCH-HHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCce
Confidence 5678899999998755 566 8888888765 789999999999999877665544 46789999999887665567899
Q ss_pred EEEEchhH-HHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHH----HhHHHHHhhhcccccccc
Q 008049 238 AIGTSIGA-NILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT----IGLQDYAQLHEPRYSRLA 312 (579)
Q Consensus 238 lvG~SlGG-~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~----~~l~~~~~~~~~~~~~~~ 312 (579)
++|||||| -+++.+....|+ .+..++++..+..............+..+...... .+.+...+....
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~------ 198 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE------ 198 (315)
T ss_pred ecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH------
Confidence 99999999 566666667777 67777777643211110000000000000000000 000111100000
Q ss_pred ChhHhhccCCHHHHHhhhhc--ccCC-------CCCHHHHHH---hCCccccc--CCCcccEEEEEeCCCCCCCCCCcch
Q 008049 313 NWEGIKKSRSIRDFDSHATC--LVGK-------FETVDTYYR---NCSSSTYV--GNVSIPLLCISSLDDPVCTVEAIPW 378 (579)
Q Consensus 313 d~~~i~~~~sl~efd~~~t~--~~~g-------~~s~~~yy~---~~s~~~~l--~~I~vPvLiI~g~dDpivp~~~~~~ 378 (579)
+.....+++|-..-.. +..+ ..++.+.+. ..+....+ ..-..|||++.|.++++++.+..+.
T Consensus 199 ----~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 199 ----VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred ----HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHH
Confidence 0011111111111100 0000 011222222 22222223 5568999999999999999987765
Q ss_pred HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 379 DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 379 ~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
.....|++++..++++||+.++|. |+ .+.+.|.+|++..
T Consensus 275 -~~~~fp~~e~~~ld~aGHwVh~E~--P~--~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 -MEKIFPNVEVHELDEAGHWVHLEK--PE--EFIESISEFLEEP 313 (315)
T ss_pred -HHHhccchheeecccCCceeecCC--HH--HHHHHHHHHhccc
Confidence 566788999999999999999993 43 4889999998764
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.67 E-value=1.1e-15 Score=139.17 Aligned_cols=144 Identities=19% Similarity=0.266 Sum_probs=110.2
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-CCCCcEEEEEE
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGT 241 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~-~p~~~i~lvG~ 241 (579)
+||++||++++ ...| ..+++.++++||.|+++|+||+|.+. ..+++.++++.+... ....+++++||
T Consensus 1 ~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGS-RRDY-QPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTT-THHH-HHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCC-HHHH-HHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 48999999664 4445 79999999999999999999999872 124777788877443 35579999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccC
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 321 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 321 (579)
|+||.+++.++.++ . +++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~-~--~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-P--RVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-T--TESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-c--ceeEEEEecCccc-------------------------------------------------
Confidence 99999999999987 4 6999999976210
Q ss_pred CHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008049 322 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 398 (579)
Q Consensus 322 sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 398 (579)
...+.+.++|+++++|++|++++.+...........+.++..+++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112334459999999999999887665544445578999999999995
No 60
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.65 E-value=6.1e-15 Score=166.75 Aligned_cols=246 Identities=18% Similarity=0.115 Sum_probs=164.4
Q ss_pred CCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 118 FSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 118 ~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
.+.+...+...||.++....+.|.+..| ..+-|+||++||..............+.++.+||.|+.+|
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~------------~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDP------------RKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCC------------CCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeC
Confidence 4557788889999999976666644321 1225999999997533333233677888999999999999
Q ss_pred CCCCCCCCCC----CCCCCCCCcHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 198 HRGLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 198 ~RG~G~S~~~----~~~~~~~~~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
+||.++-... ...-+.....+|+.++++++. ++| ..++.++|+|+||.+++..++..+. ++++++..+.
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~ 506 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALV-KLPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGG 506 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHH-hCCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCc
Confidence 9997663211 112233456799999999664 444 3589999999999999999988774 7788777665
Q ss_pred cChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcc
Q 008049 271 WDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 350 (579)
Q Consensus 271 ~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~ 350 (579)
.+-...... +.. .+ ...++ .. ..+...-.++|...|+.
T Consensus 507 ~~~~~~~~~---------~~~-------~~----------~~~~~------------~~----~~~~~~~~~~~~~~sp~ 544 (620)
T COG1506 507 VDWLLYFGE---------STE-------GL----------RFDPE------------EN----GGGPPEDREKYEDRSPI 544 (620)
T ss_pred chhhhhccc---------cch-------hh----------cCCHH------------Hh----CCCcccChHHHHhcChh
Confidence 432110000 000 00 00000 00 00100035677888999
Q ss_pred cccCCCcccEEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 351 TYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 351 ~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
..+++|++|+|+|||++|..||.+.... .+.....+++++++|+.||-.--. .+..-+.+.+.+|++..+.
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999874332 345578889999999999954331 1223356788888887654
No 61
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.64 E-value=7.8e-16 Score=143.51 Aligned_cols=228 Identities=14% Similarity=0.099 Sum_probs=146.2
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
.|++++|..|++...| ......+.+ .-+.++++|.||+|.|..+...+--.-+.+|...+++-++.. .-.|+.++|+
T Consensus 44 ~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGW 121 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGW 121 (277)
T ss_pred eeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeee
Confidence 4899999989888766 333333333 348999999999999976644433334456777777755433 3458999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccC
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 321 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 321 (579)
|=||..++..|+++++ .|..+|+++...-.........+.+ +-.++... +.+..+......+.+ .+
T Consensus 122 SdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgi--Rdv~kWs~--------r~R~P~e~~Yg~e~f--~~ 187 (277)
T KOG2984|consen 122 SDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGI--RDVNKWSA--------RGRQPYEDHYGPETF--RT 187 (277)
T ss_pred cCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhch--HHHhhhhh--------hhcchHHHhcCHHHH--HH
Confidence 9999999999999998 7999988876543221111111100 00000011 111111111111111 01
Q ss_pred CHHHHHhhhhcccCCCCCHHHHHHhC---CcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008049 322 SIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 398 (579)
Q Consensus 322 sl~efd~~~t~~~~g~~s~~~yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 398 (579)
...+|.+. +.+++..+ -|...+++|+||+|++||+.||+|+..++.+ .....+.+++.+.+.|+|.
T Consensus 188 ~wa~wvD~----------v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~f-i~~~~~~a~~~~~peGkHn 256 (277)
T KOG2984|consen 188 QWAAWVDV----------VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCF-IPVLKSLAKVEIHPEGKHN 256 (277)
T ss_pred HHHHHHHH----------HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccc-hhhhcccceEEEccCCCcc
Confidence 11122221 11222211 2557899999999999999999999998877 4566788999999999999
Q ss_pred ccccccccCcccHHHHHHHHHHh
Q 008049 399 AFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 399 gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
-++.- ..|+++.+.+||++
T Consensus 257 ~hLry----a~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 257 FHLRY----AKEFNKLVLDFLKS 275 (277)
T ss_pred eeeec----hHHHHHHHHHHHhc
Confidence 88872 34899999999975
No 62
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.63 E-value=1.1e-14 Score=162.63 Aligned_cols=133 Identities=16% Similarity=0.183 Sum_probs=104.2
Q ss_pred EEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 008049 125 FRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLG 202 (579)
Q Consensus 125 l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 202 (579)
|++.||..|..+++.|.+ ....|+||++||++.... ..+.......++++||.|+++|+||+|
T Consensus 1 i~~~DG~~L~~~~~~P~~---------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g 65 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG---------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRG 65 (550)
T ss_pred CcCCCCCEEEEEEEecCC---------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccc
Confidence 467899999999987743 145799999999954432 112223556788999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHH-CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 203 GVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 203 ~S~~~~~~~~~~~~~eDl~~~l~~l~~~-~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
.|+....... ....+|+.++++++.++ +.+.+++++|+|+||.+++.++..+++ .++++|..++..++..
T Consensus 66 ~S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 66 ASEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYR 136 (550)
T ss_pred cCCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhH
Confidence 9986533222 45679999999999876 345689999999999999999998877 7999999988877654
No 63
>PRK11071 esterase YqiA; Provisional
Probab=99.62 E-value=7.4e-15 Score=141.64 Aligned_cols=184 Identities=15% Similarity=0.095 Sum_probs=111.6
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhC--CCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 239 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lv 239 (579)
|+||++||++++..++....+...+.+. +|+|+++|+||+| +|+.+.+..+.+.++..+++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 5799999997766654433455666553 7999999999984 2344555555555666789999
Q ss_pred EEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhc
Q 008049 240 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 319 (579)
Q Consensus 240 G~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~ 319 (579)
|+||||.+++.++.+++. .+|+++++.+.... + . .+........ ..+
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~---~---------~--------~~~~~~~~~~----~~~---- 113 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVRPFEL---L---------T--------DYLGENENPY----TGQ---- 113 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHH---H---------H--------HhcCCccccc----CCC----
Confidence 999999999999999874 35888887662110 0 0 0000000000 000
Q ss_pred cCCHHHHHhhhhcccCCCCCHHHHHHhCC--cccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008049 320 SRSIRDFDSHATCLVGKFETVDTYYRNCS--SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 397 (579)
Q Consensus 320 ~~sl~efd~~~t~~~~g~~s~~~yy~~~s--~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 397 (579)
.+.--.+++.... ....+. ..+|+++|+|.+|.++|++....... ++.+.++++|+|
T Consensus 114 ----------------~~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggdH 172 (190)
T PRK11071 114 ----------------QYVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGNH 172 (190)
T ss_pred ----------------cEEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCCc
Confidence 0000011111110 012233 67888999999999999986544222 346668899999
Q ss_pred cccccccccCcccHHHHHHHHHH
Q 008049 398 LAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 398 ~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
.- .+. ..+.+.+.+|++
T Consensus 173 ~f--~~~----~~~~~~i~~fl~ 189 (190)
T PRK11071 173 AF--VGF----ERYFNQIVDFLG 189 (190)
T ss_pred ch--hhH----HHhHHHHHHHhc
Confidence 54 221 235677788764
No 64
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.61 E-value=2.9e-15 Score=146.71 Aligned_cols=196 Identities=21% Similarity=0.214 Sum_probs=129.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCCCCCCCCC----CCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhh
Q 008049 181 HLVFNTAKRGWNVVVSNHRGLGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 181 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~----~~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~ 254 (579)
.....|+++||.|+.+|+||.++..... .........+|+.++++++.+++ ...+|.++|+|+||.+++..+..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4567888999999999999988642110 11111234689999999998875 34689999999999999999998
Q ss_pred cCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhccc
Q 008049 255 EGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV 334 (579)
Q Consensus 255 ~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~ 334 (579)
+++ .++++|+.++..|.......... +... ++...
T Consensus 85 ~~~--~f~a~v~~~g~~d~~~~~~~~~~------~~~~--------------------------------~~~~~----- 119 (213)
T PF00326_consen 85 HPD--RFKAAVAGAGVSDLFSYYGTTDI------YTKA--------------------------------EYLEY----- 119 (213)
T ss_dssp TCC--GSSEEEEESE-SSTTCSBHHTCC------HHHG--------------------------------HHHHH-----
T ss_pred cce--eeeeeeccceecchhcccccccc------cccc--------------------------------ccccc-----
Confidence 888 89999999988876543211000 0000 00000
Q ss_pred CCCCCHHHHHHhCCcccccCC--CcccEEEEEeCCCCCCCCCCcc---hHHHhcCCCEEEEEeCCCCccccccccccCcc
Q 008049 335 GKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVEAIP---WDECRANKNVVLATTWHGGHLAFFEGLTAAGM 409 (579)
Q Consensus 335 ~g~~s~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~~~~---~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~ 409 (579)
.......+.|+..++...+.+ +++|+|++||++|+.||.+... ..+.....++++.+++++|| ++... ....
T Consensus 120 ~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~~--~~~~ 196 (213)
T PF00326_consen 120 GDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGNP--ENRR 196 (213)
T ss_dssp SSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTSH--HHHH
T ss_pred CccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCCc--hhHH
Confidence 000012344445556666666 8999999999999999987433 23456677799999999999 33321 1122
Q ss_pred cHHHHHHHHHHhhcC
Q 008049 410 WWVRAVNEYLGVLHS 424 (579)
Q Consensus 410 w~~~~v~eFL~~~~~ 424 (579)
.+.+.+.+||+..++
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 467889999988654
No 65
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.60 E-value=3.6e-14 Score=151.28 Aligned_cols=113 Identities=13% Similarity=0.035 Sum_probs=77.1
Q ss_pred CCCcEEEEECCCCCCCcc-----------HHHHHHHH---HHHhCCCeEEEEcCCCCCCCC-------C-C-----CCCC
Q 008049 159 DTTPIAIVIPGLTSDSAA-----------SYIRHLVF---NTAKRGWNVVVSNHRGLGGVS-------I-T-----SDCF 211 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~-----------~yi~~l~~---~l~~~Gy~Vvv~D~RG~G~S~-------~-~-----~~~~ 211 (579)
+..++||++|+++|+++. .|+..++- .+-...|-|+++|..|-|.|. . . +.+.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345799999999986532 23344433 233346999999999965421 1 0 0111
Q ss_pred ----CCCCcHHHHHHHHHHHHHHCCCCcEE-EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 212 ----YNAGWTEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 212 ----~~~~~~eDl~~~l~~l~~~~p~~~i~-lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
+.....+|+.+.+..+.+..+..++. ++||||||++++.++.++|+ ++.++|++++....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~~~~ 198 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGNPQN 198 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecCCCC
Confidence 11123466666666666666667775 99999999999999999999 89999999875443
No 66
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.59 E-value=3.5e-14 Score=155.80 Aligned_cols=235 Identities=12% Similarity=0.132 Sum_probs=133.8
Q ss_pred CCcEEEEECCCCCCCccHHH---HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHCCCCc
Q 008049 160 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi---~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-eDl~~~l~~l~~~~p~~~ 235 (579)
.++.||++||+.+...-.-. +.++.+|.++||+|+++|+||+|.+..... .. .+. +++.++++.+.+..+..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~d-dY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT--FD-DYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC--hh-hhHHHHHHHHHHHHHHhcCCCC
Confidence 34668899998532221111 379999999999999999999998743211 11 233 568899999988888889
Q ss_pred EEEEEEchhHHHHH----HHHhhc-CCCCCccEEEEEcCCcChhhhhH---HHhhhHHHHHHHHHHHH-------hHHHH
Q 008049 236 LFAIGTSIGANILV----KYLGEE-GEKTPVAGAAAICSPWDLLIGDR---FIGRRLIQKIYDRALTI-------GLQDY 300 (579)
Q Consensus 236 i~lvG~SlGG~ial----~ya~~~-~~~~~v~a~V~is~p~d~~~~~~---~l~~~~~~~~~~~~l~~-------~l~~~ 300 (579)
++++||||||.++. .+++.. ++ +|+++++++++.|+..... ++....... ....+.. .+...
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~~Df~~~G~l~~f~~~~~~~~-~e~~~~~~G~lpg~~m~~~ 340 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTLLDFSDPGELGVFVDEEIVAG-IERQNGGGGYLDGRQMAVT 340 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecCcCCCCcchhhhhcCchhHHH-HHHHHHhcCCCCHHHHHHH
Confidence 99999999999863 244544 44 7999999999988754311 111110000 0000000 00000
Q ss_pred Hhhhccc---cccccChhHhhccCCHHHHHhhh----hcccCC--CC-CHHHHHHhCC----------cccccCCCcccE
Q 008049 301 AQLHEPR---YSRLANWEGIKKSRSIRDFDSHA----TCLVGK--FE-TVDTYYRNCS----------SSTYVGNVSIPL 360 (579)
Q Consensus 301 ~~~~~~~---~~~~~d~~~i~~~~sl~efd~~~----t~~~~g--~~-s~~~yy~~~s----------~~~~l~~I~vPv 360 (579)
+...++. .... .+.....+....||-.+ ...+.+ +. -+.+.|.... ....+.+|++|+
T Consensus 341 F~~lrp~~l~w~~~--v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPv 418 (532)
T TIGR01838 341 FSLLRENDLIWNYY--VDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPV 418 (532)
T ss_pred HHhcChhhHHHHHH--HHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCE
Confidence 0000000 0000 00000000000111110 000000 00 1122233222 224678899999
Q ss_pred EEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008049 361 LCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 403 (579)
Q Consensus 361 LiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg 403 (579)
|+|.|++|.++|.+.... .....++....+++++||+.+++.
T Consensus 419 LvV~G~~D~IvP~~sa~~-l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 419 YIIATREDHIAPWQSAYR-GAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred EEEeeCCCCcCCHHHHHH-HHHHCCCCEEEEECCCCCchHhhC
Confidence 999999999999875544 344566788889999999999885
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.59 E-value=3.2e-14 Score=143.78 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=87.4
Q ss_pred CCcEEEEECCCCCCCc--cHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEE
Q 008049 160 TTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 237 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~ 237 (579)
.+|+||++||+++... ...+..+++.|+++||+|+++|+||||.|...........+.+|+.++++++++. +..+++
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 3689999999954322 1223667889999999999999999999865432222234679999999999875 456899
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
++||||||.+++.++.++++ .+.++|++++....
T Consensus 103 LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred EEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 99999999999999999887 79999999876543
No 68
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.56 E-value=1.1e-13 Score=145.43 Aligned_cols=242 Identities=17% Similarity=0.170 Sum_probs=135.9
Q ss_pred CCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 118 FSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 118 ~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
.+.++..|+.++ ++|......|.. +...|+||++.|+- +-.+.+.+.+.+++..+|+.++++|
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~---------------~~p~P~VIv~gGlD-s~qeD~~~l~~~~l~~rGiA~LtvD 225 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG---------------EKPYPTVIVCGGLD-SLQEDLYRLFRDYLAPRGIAMLTVD 225 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS---------------SS-EEEEEEE--TT-S-GGGGHHHHHCCCHHCT-EEEEE-
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC---------------CCCCCEEEEeCCcc-hhHHHHHHHHHHHHHhCCCEEEEEc
Confidence 345777788876 778766665542 25679999999994 4444443566677999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 198 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 198 ~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
.||.|.|.... .......-..++++++...- ...+|.++|.|+||+++++.|.-+++ +|+|+|+.+++.+-.-
T Consensus 226 mPG~G~s~~~~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~f 300 (411)
T PF06500_consen 226 MPGQGESPKWP---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFF 300 (411)
T ss_dssp -TTSGGGTTT----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGG
T ss_pred cCCCcccccCC---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhh
Confidence 99999985321 11111233567888887642 24689999999999999999987776 8999999999865443
Q ss_pred hhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCccccc--
Q 008049 276 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV-- 353 (579)
Q Consensus 276 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l-- 353 (579)
......... ...|...++..+... ..+.+.+.. + -..+.-+..| .+
T Consensus 301 t~~~~~~~~-P~my~d~LA~rlG~~----------~~~~~~l~~-----e-l~~~SLk~qG---------------lL~~ 348 (411)
T PF06500_consen 301 TDPEWQQRV-PDMYLDVLASRLGMA----------AVSDESLRG-----E-LNKFSLKTQG---------------LLSG 348 (411)
T ss_dssp H-HHHHTTS--HHHHHHHHHHCT-S----------CE-HHHHHH-----H-GGGGSTTTTT---------------TTTS
T ss_pred ccHHHHhcC-CHHHHHHHHHHhCCc----------cCCHHHHHH-----H-HHhcCcchhc---------------cccC
Confidence 322222221 222222222211000 001110000 0 0111111111 23
Q ss_pred CCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC-ccccccccccCcccHHHHHHHHHHhh
Q 008049 354 GNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGG-HLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 354 ~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG-H~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
.+.++|+|.+++++|+++|.+.... .+..+.+.+...++.+. |.||-. ....+.+||+..
T Consensus 349 rr~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~--------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 349 RRCPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ--------ALDEIYKWLEDK 409 (411)
T ss_dssp S-BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH--------HHHHHHHHHHHH
T ss_pred CCCCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH--------HHHHHHHHHHHh
Confidence 6678999999999999999876544 34455555566666555 888765 456778888764
No 69
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.52 E-value=2.8e-13 Score=126.26 Aligned_cols=176 Identities=20% Similarity=0.259 Sum_probs=132.6
Q ss_pred CCCcEEEEECC---CCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc
Q 008049 159 DTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHG---l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
+.+|+.|+||- ++|+....-+..++..|.+.||.|+.+|+||-|+|.++-+ ...+..+|..++++|++.++|+.+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD--~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD--NGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc--CCcchHHHHHHHHHHHHhhCCCch
Confidence 67899999994 3344455556788899999999999999999999976533 235788999999999999999988
Q ss_pred E-EEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccCh
Q 008049 236 L-FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 314 (579)
Q Consensus 236 i-~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~ 314 (579)
. .+.|+|+||.|++..+.+.++ ....+++.++.+.. +
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~---------------d------------------------ 141 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAY---------------D------------------------ 141 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCch---------------h------------------------
Confidence 7 788999999999999999877 55666666654310 0
Q ss_pred hHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008049 315 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH 394 (579)
Q Consensus 315 ~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 394 (579)
...+.....|.++|+|+.|.+++....-. ........++.+++
T Consensus 142 -----------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~--~~~~~~~~~i~i~~ 184 (210)
T COG2945 142 -----------------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLK--WQESIKITVITIPG 184 (210)
T ss_pred -----------------------------------hhhccCCCCCceeEecChhhhhcHHHHHH--hhcCCCCceEEecC
Confidence 01234556899999999998888764322 22335677888999
Q ss_pred CCccccccccccCcccHHHHHHHHHH
Q 008049 395 GGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 395 GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
+.|+-+-. -..+.+.+.+|+.
T Consensus 185 a~HFF~gK-----l~~l~~~i~~~l~ 205 (210)
T COG2945 185 ADHFFHGK-----LIELRDTIADFLE 205 (210)
T ss_pred CCceeccc-----HHHHHHHHHHHhh
Confidence 99964432 1247788888885
No 70
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.52 E-value=3.7e-13 Score=160.35 Aligned_cols=255 Identities=14% Similarity=0.124 Sum_probs=137.4
Q ss_pred CCCcEEEEECCCCCCCccHHHH-----HHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH---HHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIR-----HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYL---HHE 230 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~-----~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l---~~~ 230 (579)
..+|.||++||+.+ +...| + .++..|.++||+|+++|+ |.++.. ...+..+..+++..+++.+ +..
T Consensus 65 ~~~~plllvhg~~~-~~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~-~~~~~~~l~~~i~~l~~~l~~v~~~ 138 (994)
T PRK07868 65 PVGPPVLMVHPMMM-SADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKV-EGGMERNLADHVVALSEAIDTVKDV 138 (994)
T ss_pred CCCCcEEEECCCCC-Cccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChh-HcCccCCHHHHHHHHHHHHHHHHHh
Confidence 34578999999954 44334 2 247899999999999995 544332 1212234445554444444 333
Q ss_pred CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH-HHhh-------hH-HHHHHH------HHH--
Q 008049 231 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-FIGR-------RL-IQKIYD------RAL-- 293 (579)
Q Consensus 231 ~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~-~l~~-------~~-~~~~~~------~~l-- 293 (579)
. ..++.++||||||.+++.|++.++++ +|.++|++++|.|+..... .+.. .+ ...+.. ...
T Consensus 139 ~-~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 216 (994)
T PRK07868 139 T-GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMART 216 (994)
T ss_pred h-CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHH
Confidence 3 34899999999999999998865431 7999999999977532100 0000 00 000000 000
Q ss_pred ----HHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhc-ccCC--CC-CHHHHHHhCCc----------ccccCC
Q 008049 294 ----TIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATC-LVGK--FE-TVDTYYRNCSS----------STYVGN 355 (579)
Q Consensus 294 ----~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~-~~~g--~~-s~~~yy~~~s~----------~~~l~~ 355 (579)
...+. ........+....+.+.........++...... ...| +. ....++..... ...+.+
T Consensus 217 ~~~~l~p~~-~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~ 295 (994)
T PRK07868 217 GFQMLDPVK-TAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLAD 295 (994)
T ss_pred HHHhcChhH-HHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhh
Confidence 00000 000000000000110100000001111110000 0001 11 12223321111 124789
Q ss_pred CcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEE-EEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 356 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVL-ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 356 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l-~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
|++|+|+|+|++|+++|++.... .....++..+ .+++++||++++-|....+ -+-..+.+||.+.-.
T Consensus 296 i~~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~-~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 296 ITCPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQ-QTWPTVADWVKWLEG 363 (994)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhh-hhChHHHHHHHHhcc
Confidence 99999999999999999886554 3455678877 6789999999998754332 234679999988644
No 71
>PLN00021 chlorophyllase
Probab=99.52 E-value=6.1e-13 Score=137.86 Aligned_cols=195 Identities=17% Similarity=0.140 Sum_probs=126.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC-------
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------- 231 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~------- 231 (579)
...|+||++||+.+ ....| ..++++++++||.|+++|++|++... .....+|..++++++.+..
T Consensus 50 g~~PvVv~lHG~~~-~~~~y-~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~~~~l~~~l~~~l~~~ 120 (313)
T PLN00021 50 GTYPVLLFLHGYLL-YNSFY-SQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAVINWLSSGLAAVLPEG 120 (313)
T ss_pred CCCCEEEEECCCCC-CcccH-HHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHHHHHHHhhhhhhcccc
Confidence 45799999999955 45556 78899999999999999999975421 1123467777778776531
Q ss_pred ---CCCcEEEEEEchhHHHHHHHHhhcCCC---CCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhc
Q 008049 232 ---PKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE 305 (579)
Q Consensus 232 ---p~~~i~lvG~SlGG~ial~ya~~~~~~---~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 305 (579)
...+++++||||||.+++.++..+++. .++.++|++++........
T Consensus 121 ~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~---------------------------- 172 (313)
T PLN00021 121 VRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK---------------------------- 172 (313)
T ss_pred cccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc----------------------------
Confidence 125799999999999999999887642 3578888886543211000
Q ss_pred cccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCC-----CCC----CCCc
Q 008049 306 PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDP-----VCT----VEAI 376 (579)
Q Consensus 306 ~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDp-----ivp----~~~~ 376 (579)
. . ...+ . .| ....-++.+|+|+|.+..|+ ++| ...-
T Consensus 173 ~-----~-------~p~i-----------l-------~~-----~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~ 217 (313)
T PLN00021 173 Q-----T-------PPPV-----------L-------TY-----APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVN 217 (313)
T ss_pred C-----C-------CCcc-----------c-------cc-----CcccccCCCCeEEEecCCCcccccccccccCCCCCC
Confidence 0 0 0000 0 00 01122378999999999763 333 3322
Q ss_pred ch-HHHhcCCCEEEEEeCCCCccccccccccC-------------------cccHHHHHHHHHHhhcCC
Q 008049 377 PW-DECRANKNVVLATTWHGGHLAFFEGLTAA-------------------GMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 377 ~~-~~~~~~~~~~l~~~~~GGH~gfleg~~~~-------------------~~w~~~~v~eFL~~~~~~ 425 (579)
.. ......+++.+.+.+++||+.++++..+. +..+...+..||...+..
T Consensus 218 ~~~f~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 218 HAEFFNECKAPAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred HHHHHHhcCCCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 22 23345568889999999999998864111 113345677888877654
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.51 E-value=1.5e-12 Score=133.55 Aligned_cols=207 Identities=14% Similarity=0.137 Sum_probs=123.9
Q ss_pred CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH--HHHHHHHHhCCCeEEEEcCCCCCCC-C
Q 008049 129 DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGV-S 205 (579)
Q Consensus 129 DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi--~~l~~~l~~~Gy~Vvv~D~RG~G~S-~ 205 (579)
=|..+.+..+.|+... ....|+|+++||+.|+. ..|. ..+...+...|+.|+++|..++|.- .
T Consensus 28 l~~~~~~~vy~P~~~~-------------~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~ 93 (283)
T PLN02442 28 LGCSMTFSVYFPPASD-------------SGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVE 93 (283)
T ss_pred cCCceEEEEEcCCccc-------------CCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCC
Confidence 4667777777775311 24679999999996644 3332 2244566778999999998776611 0
Q ss_pred CCC--------CCCC-------------CCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEE
Q 008049 206 ITS--------DCFY-------------NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 264 (579)
Q Consensus 206 ~~~--------~~~~-------------~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~ 264 (579)
... ...| .....+++...++.........+++++||||||.+++.++.++|+ .+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~ 171 (283)
T PLN02442 94 GEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSV 171 (283)
T ss_pred CCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEE
Confidence 000 0001 011234454444443333345689999999999999999999998 78999
Q ss_pred EEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHH
Q 008049 265 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYY 344 (579)
Q Consensus 265 V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy 344 (579)
+++++..+..... .. ... +..++. .+ ..++.. +
T Consensus 172 ~~~~~~~~~~~~~-~~-----~~~--------~~~~~g---------~~---------~~~~~~---------------~ 204 (283)
T PLN02442 172 SAFAPIANPINCP-WG-----QKA--------FTNYLG---------SD---------KADWEE---------------Y 204 (283)
T ss_pred EEECCccCcccCc-hh-----hHH--------HHHHcC---------CC---------hhhHHH---------------c
Confidence 9998876643111 00 000 000000 00 000000 1
Q ss_pred HhCCcccccCCCcccEEEEEeCCCCCCCCCC----cchHHHhcCCCEEEEEeCCCCcc
Q 008049 345 RNCSSSTYVGNVSIPLLCISSLDDPVCTVEA----IPWDECRANKNVVLATTWHGGHL 398 (579)
Q Consensus 345 ~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~----~~~~~~~~~~~~~l~~~~~GGH~ 398 (579)
...+....+..+++|+++++|++|++++... +...+.....++++.++++++|.
T Consensus 205 d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 205 DATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred ChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 1222334455678999999999999998631 22234455667999999999995
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.50 E-value=3.1e-13 Score=127.58 Aligned_cols=205 Identities=16% Similarity=0.159 Sum_probs=132.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
..+.+||+|||+-.+....++..++..+.+.||.++.+|++|.|.|+..-..-.....++|+..+++++.... ..--++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEEEEE
Confidence 3456899999998777778889999999999999999999999999765321111245699999999997632 112368
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhh
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 318 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~ 318 (579)
+|||-||.+++.|+..+.+ +.-++-++.-+|....- ..++-.....+....++..+-.+.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I---~eRlg~~~l~~ike~Gfid~~~rk-------------- 169 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGI---NERLGEDYLERIKEQGFIDVGPRK-------------- 169 (269)
T ss_pred EeecCccHHHHHHHHhhcC---chheEEcccccchhcch---hhhhcccHHHHHHhCCceecCccc--------------
Confidence 9999999999999999887 66677776666654321 111101111111111110000000
Q ss_pred ccCCHHHHHhhhhcccCCCC----CHHHHHHhCCcccccCCC--cccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008049 319 KSRSIRDFDSHATCLVGKFE----TVDTYYRNCSSSTYVGNV--SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 392 (579)
Q Consensus 319 ~~~sl~efd~~~t~~~~g~~----s~~~yy~~~s~~~~l~~I--~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 392 (579)
. -.+|. +.. +.-...+...-.+| +||+|-+||..|.+||.+.... .++..|+-.+.++
T Consensus 170 -G-------------~y~~rvt~eSlm-drLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake-fAk~i~nH~L~iI 233 (269)
T KOG4667|consen 170 -G-------------KYGYRVTEESLM-DRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE-FAKIIPNHKLEII 233 (269)
T ss_pred -C-------------CcCceecHHHHH-HHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH-HHHhccCCceEEe
Confidence 0 00110 111 11111222222334 8999999999999999987654 5677888999999
Q ss_pred CCCCcccc
Q 008049 393 WHGGHLAF 400 (579)
Q Consensus 393 ~~GGH~gf 400 (579)
+++.|.-.
T Consensus 234 EgADHnyt 241 (269)
T KOG4667|consen 234 EGADHNYT 241 (269)
T ss_pred cCCCcCcc
Confidence 99999643
No 74
>PRK10115 protease 2; Provisional
Probab=99.48 E-value=9e-13 Score=150.33 Aligned_cols=223 Identities=14% Similarity=0.096 Sum_probs=152.3
Q ss_pred CceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 119 SYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 119 ~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
.-++..++..||..|.+.++.+++.. .+...|+||++||..+.+....+......+.++||.|+..|.
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~------------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~ 482 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF------------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHV 482 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC------------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEc
Confidence 44666778899999988666654321 124569999999987766554445666788899999999999
Q ss_pred CCCCCCCCCCC----CCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 199 RGLGGVSITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 199 RG~G~S~~~~~----~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
||-|+-....- ........+|+.++++++.++. ...++.+.|.|.||.++...+.++|+ .++|+|+..+..|
T Consensus 483 RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D 560 (686)
T PRK10115 483 RGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVD 560 (686)
T ss_pred CCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchh
Confidence 99776432110 0111234689999999998764 24689999999999999999999998 8999998888777
Q ss_pred hhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCC---CHHHHHHhCCc
Q 008049 273 LLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE---TVDTYYRNCSS 349 (579)
Q Consensus 273 ~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~---s~~~yy~~~s~ 349 (579)
+..... . +.+. ....++.. .|.. ...+|++..|+
T Consensus 561 ~~~~~~---------------~-----------~~~p-----------~~~~~~~e------~G~p~~~~~~~~l~~~SP 597 (686)
T PRK10115 561 VVTTML---------------D-----------ESIP-----------LTTGEFEE------WGNPQDPQYYEYMKSYSP 597 (686)
T ss_pred Hhhhcc---------------c-----------CCCC-----------CChhHHHH------hCCCCCHHHHHHHHHcCc
Confidence 642100 0 0000 00001111 1211 23467778899
Q ss_pred ccccCCCccc-EEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEe---CCCCcc
Q 008049 350 STYVGNVSIP-LLCISSLDDPVCTVEAIPW---DECRANKNVVLATT---WHGGHL 398 (579)
Q Consensus 350 ~~~l~~I~vP-vLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~---~~GGH~ 398 (579)
.+.+.+++.| +|+++|.+|+-||+..... .+.....+..++++ +++||.
T Consensus 598 ~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 598 YDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred hhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 9999999999 5677999999999874332 23333445566666 899997
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.48 E-value=1.7e-12 Score=129.27 Aligned_cols=178 Identities=13% Similarity=0.076 Sum_probs=114.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-CCC------CCCcH-------HHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFY------NAGWT-------EDAREVI 224 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~------~~~~~-------eDl~~~l 224 (579)
+.+|+||++||++ ++...+ ..+++.+.+.++.+.+++.+|......... ..+ ..... +++.+.+
T Consensus 14 ~~~~~vIlLHG~G-~~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 14 PAQQLLLLFHGVG-DNPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCcEEEEEeCCC-CChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 5568999999995 455444 788999988887778888887643211101 011 01111 2333445
Q ss_pred HHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHh
Q 008049 225 GYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQ 302 (579)
Q Consensus 225 ~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~ 302 (579)
+++..++ +..+++++|||+||.+++.++..+++ .+.+++++++.+..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~----------------------------- 140 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYAS----------------------------- 140 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEecccccc-----------------------------
Confidence 5555554 34589999999999999998888776 55556655431100
Q ss_pred hhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcch---H
Q 008049 303 LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---D 379 (579)
Q Consensus 303 ~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~ 379 (579)
+ . .....++|++++||++|+++|.+.... .
T Consensus 141 -----~---~---------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~ 173 (232)
T PRK11460 141 -----L---P---------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEA 173 (232)
T ss_pred -----c---c---------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHH
Confidence 0 0 001136899999999999999875432 2
Q ss_pred HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 380 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 380 ~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
+.....++++..++++||..--+ ..+.+.+||...+.
T Consensus 174 L~~~g~~~~~~~~~~~gH~i~~~--------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 174 LISLGGDVTLDIVEDLGHAIDPR--------LMQFALDRLRYTVP 210 (232)
T ss_pred HHHCCCCeEEEEECCCCCCCCHH--------HHHHHHHHHHHHcc
Confidence 33345678899999999965322 45667777777654
No 76
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.45 E-value=2e-12 Score=126.67 Aligned_cols=106 Identities=22% Similarity=0.304 Sum_probs=79.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPL 236 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl~~~l~~l~~~~p~~~i 236 (579)
...|+++++||. |.|.-.| ..++..+..+ ..+|+++|+||||.+......... .....|+.++++++-...+ .+|
T Consensus 72 t~gpil~l~HG~-G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQI 148 (343)
T ss_pred CCccEEEEeecC-cccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-Cce
Confidence 457999999998 6666556 6777777654 679999999999999776543332 4566888888887765443 379
Q ss_pred EEEEEchhHHHHHHHHhhcCCCCCccEEEEEc
Q 008049 237 FAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 268 (579)
Q Consensus 237 ~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is 268 (579)
++|||||||.|+...+...--. .+.|++.|.
T Consensus 149 ilVGHSmGGaIav~~a~~k~lp-sl~Gl~viD 179 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLP-SLAGLVVID 179 (343)
T ss_pred EEEeccccchhhhhhhhhhhch-hhhceEEEE
Confidence 9999999999998776654221 388888875
No 77
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.45 E-value=1.5e-12 Score=137.71 Aligned_cols=285 Identities=18% Similarity=0.195 Sum_probs=176.4
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH----HHHHHHHHhCCCe
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWN 192 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi----~~l~~~l~~~Gy~ 192 (579)
..+.|...+++.||..+.+.-..... ..+|+|++.||+.++|..+.. +.++-.|+++||.
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~----------------~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYD 108 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGK----------------KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYD 108 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCC----------------CCCCcEEEeeccccccccceecCccccHHHHHHHcCCc
Confidence 46779999999999988887654321 578999999999887765432 4577789999999
Q ss_pred EEEEcCCCCCCCCCC-------CCCCCCCCcH----HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCC-CCC
Q 008049 193 VVVSNHRGLGGVSIT-------SDCFYNAGWT----EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTP 260 (579)
Q Consensus 193 Vvv~D~RG~G~S~~~-------~~~~~~~~~~----eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~-~~~ 260 (579)
|+.-|.||-.-|... ...++...|- .|+.++|+++.+..+..+++.||||.|+.+....+.+.++ +.+
T Consensus 109 VWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~k 188 (403)
T KOG2624|consen 109 VWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKK 188 (403)
T ss_pred eeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhh
Confidence 999999995544211 1223333333 5999999999999888899999999999999988888865 236
Q ss_pred ccEEEEEcCCcChhhhhHHHhhhH-------------------------HHHHHHHH-----HHHhHHHHHhhhcccccc
Q 008049 261 VAGAAAICSPWDLLIGDRFIGRRL-------------------------IQKIYDRA-----LTIGLQDYAQLHEPRYSR 310 (579)
Q Consensus 261 v~a~V~is~p~d~~~~~~~l~~~~-------------------------~~~~~~~~-----l~~~l~~~~~~~~~~~~~ 310 (579)
|+.+++++|..-.......+.... .+.+.... +...+....-.. +.
T Consensus 189 I~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~---~~- 264 (403)
T KOG2624|consen 189 IKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFL---LV- 264 (403)
T ss_pred hheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHH---Hc-
Confidence 999999988763321111110000 00000000 000111100000 00
Q ss_pred ccChhHh------------hcc---CCHHHHHhhhhc---ccCCCC---CHHHHHHhCCcccccCCCcccEEEEEeCCCC
Q 008049 311 LANWEGI------------KKS---RSIRDFDSHATC---LVGKFE---TVDTYYRNCSSSTYVGNVSIPLLCISSLDDP 369 (579)
Q Consensus 311 ~~d~~~i------------~~~---~sl~efd~~~t~---~~~g~~---s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDp 369 (579)
..+.... ... +.+..|.+.... +.+.|. +...|-....+...+.+|++|+.+.+|.+|-
T Consensus 265 G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~ 344 (403)
T KOG2624|consen 265 GWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDW 344 (403)
T ss_pred CcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcc
Confidence 0000000 011 122223322211 112222 3344444556677899999999999999999
Q ss_pred CCCCCCcchHHHhcCCCEEE---EEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008049 370 VCTVEAIPWDECRANKNVVL---ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 423 (579)
Q Consensus 370 ivp~~~~~~~~~~~~~~~~l---~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~ 423 (579)
++.++.+...... .++... +.+++-.|+.|+=|... +..+.+.|++.++...
T Consensus 345 l~~~~DV~~~~~~-~~~~~~~~~~~~~~ynHlDFi~g~da-~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 345 LADPEDVLILLLV-LPNSVIKYIVPIPEYNHLDFIWGLDA-KEEVYDPVIERLRLFE 399 (403)
T ss_pred cCCHHHHHHHHHh-cccccccccccCCCccceeeeeccCc-HHHHHHHHHHHHHhhh
Confidence 9999877653333 233222 22789999999987543 2357788888887654
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.44 E-value=8.3e-12 Score=127.42 Aligned_cols=207 Identities=14% Similarity=0.127 Sum_probs=117.1
Q ss_pred CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH-HH-HHHHHHhCCCeEEEEcC--CCCCCC
Q 008049 129 DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI-RH-LVFNTAKRGWNVVVSNH--RGLGGV 204 (579)
Q Consensus 129 DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi-~~-l~~~l~~~Gy~Vvv~D~--RG~G~S 204 (579)
.|....+.++.|++.. ....|+|+++||++++. ..|. .. +...+.+.||.|+++|. ||+|.+
T Consensus 23 ~~~~~~~~v~~P~~~~-------------~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~ 88 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAA-------------AGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIA 88 (275)
T ss_pred cCCceEEEEEcCCCcc-------------CCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCC
Confidence 3555666677664321 13469999999995544 4342 22 22344557999999998 666543
Q ss_pred CCCC-------CCCC----------CCCcHHHH-HHHHHHHHHHCC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEE
Q 008049 205 SITS-------DCFY----------NAGWTEDA-REVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 264 (579)
Q Consensus 205 ~~~~-------~~~~----------~~~~~eDl-~~~l~~l~~~~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~ 264 (579)
.... ...| ...+.+.+ .++...+.+.++ ..+++++||||||.+++.++.++|+ .+.++
T Consensus 89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~ 166 (275)
T TIGR02821 89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSV 166 (275)
T ss_pred CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEE
Confidence 2110 0000 01112232 233334444443 4589999999999999999999998 78999
Q ss_pred EEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHH
Q 008049 265 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYY 344 (579)
Q Consensus 265 V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy 344 (579)
+++++..+..... . . .. .+..++.. +. ..... .+...+.
T Consensus 167 ~~~~~~~~~~~~~-~-----~----~~----~~~~~l~~---------~~------~~~~~------------~~~~~~~ 205 (275)
T TIGR02821 167 SAFAPIVAPSRCP-W-----G----QK----AFSAYLGA---------DE------AAWRS------------YDASLLV 205 (275)
T ss_pred EEECCccCcccCc-c-----h----HH----HHHHHhcc---------cc------cchhh------------cchHHHH
Confidence 9988775532110 0 0 00 00111000 00 00000 0000111
Q ss_pred HhCCcccccCCCcccEEEEEeCCCCCCCCC-C---cchHHHhcCCCEEEEEeCCCCccc
Q 008049 345 RNCSSSTYVGNVSIPLLCISSLDDPVCTVE-A---IPWDECRANKNVVLATTWHGGHLA 399 (579)
Q Consensus 345 ~~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~---~~~~~~~~~~~~~l~~~~~GGH~g 399 (579)
.. .+...|+++.+|++|++++.+ . +...+.....++++...++.+|--
T Consensus 206 ------~~-~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f 257 (275)
T TIGR02821 206 ------AD-GGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSY 257 (275)
T ss_pred ------hh-cccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccc
Confidence 01 124679999999999999973 2 333355666778999999999954
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.42 E-value=8.3e-12 Score=122.37 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=81.8
Q ss_pred CCCcEEEEECCCCCCCccHHH--HHHHHHHHhCCCeEEEEcCCCCCCCCCCCC------CCCCCCcHHHHHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGVSITSD------CFYNAGWTEDAREVIGYLHHE 230 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi--~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~------~~~~~~~~eDl~~~l~~l~~~ 230 (579)
...|+||++||.++ +...+. ..+...+.+.||.|+++|+||++.+..... .........|+.++++++.++
T Consensus 11 ~~~P~vv~lHG~~~-~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQ-TASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCC-CHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46799999999854 433442 135566667899999999999886432110 011124568899999999888
Q ss_pred CC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 231 YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 231 ~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
++ ..+++++|||+||.+++.++.++++ .+.+++.++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 74 3589999999999999999999988 788888887653
No 80
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.41 E-value=9.5e-13 Score=125.72 Aligned_cols=250 Identities=18% Similarity=0.175 Sum_probs=138.2
Q ss_pred EEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 008049 123 QLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 202 (579)
Q Consensus 123 ~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 202 (579)
..+..+||..+..+-+...+ +.+--+++.|-+|-....| +.++..+++.||.|+.+|+||.|
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-----------------~~~g~~~va~a~Gv~~~fY-RrfA~~a~~~Gf~Vlt~dyRG~g 69 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-----------------KASGRLVVAGATGVGQYFY-RRFAAAAAKAGFEVLTFDYRGIG 69 (281)
T ss_pred cccccCCCccCccccccCCC-----------------CCCCcEEecccCCcchhHh-HHHHHHhhccCceEEEEeccccc
Confidence 45678899988877664422 1122345555556455445 99999999999999999999999
Q ss_pred CCCCCCCCCCC---CCcH-HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhH
Q 008049 203 GVSITSDCFYN---AGWT-EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 278 (579)
Q Consensus 203 ~S~~~~~~~~~---~~~~-eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~ 278 (579)
+|..+...-.. .+|. .|+.++++++++..|..|.+.||||+||.+.. ++++++ ++.+....+...-......
T Consensus 70 ~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~---k~~a~~vfG~gagwsg~m~ 145 (281)
T COG4757 70 QSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP---KYAAFAVFGSGAGWSGWMG 145 (281)
T ss_pred CCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc---ccceeeEeccccccccchh
Confidence 99776543222 2333 69999999999988999999999999998764 444444 3444444333221111110
Q ss_pred HHhhhHHHHHHHHHHHHhHHHHHhhhc-cccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCc
Q 008049 279 FIGRRLIQKIYDRALTIGLQDYAQLHE-PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVS 357 (579)
Q Consensus 279 ~l~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~ 357 (579)
..++.....+++ +.-.+..+.+... ..+-... .-....-.++|..-...+..-+.+-..- ...+..+.++
T Consensus 146 ~~~~l~~~~l~~--lv~p~lt~w~g~~p~~l~G~G---~d~p~~v~RdW~RwcR~p~y~fddp~~~----~~~q~yaaVr 216 (281)
T COG4757 146 LRERLGAVLLWN--LVGPPLTFWKGYMPKDLLGLG---SDLPGTVMRDWARWCRHPRYYFDDPAMR----NYRQVYAAVR 216 (281)
T ss_pred hhhcccceeecc--ccccchhhccccCcHhhcCCC---ccCcchHHHHHHHHhcCccccccChhHh----HHHHHHHHhc
Confidence 000000000000 0000000100000 0000000 0011233444444333332222221100 0113457789
Q ss_pred ccEEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCC----Cccccccc
Q 008049 358 IPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHG----GHLAFFEG 403 (579)
Q Consensus 358 vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~G----GH~gfleg 403 (579)
+|+.++...||+.+|+.+.... ..-.+..++...++.. ||++++..
T Consensus 217 tPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~ 267 (281)
T COG4757 217 TPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFRE 267 (281)
T ss_pred CceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhcc
Confidence 9999999999999998765432 2234444555555543 99999974
No 81
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.40 E-value=8.3e-12 Score=121.42 Aligned_cols=102 Identities=14% Similarity=0.227 Sum_probs=69.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC--CCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
.|.++++||+.++...+. . ....+... .|+++++|+||||.|. . .........+|+..+++ .....++++
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-P-VFKVLPALAARYRVIAPDLRGHGRSD-P-AGYSLSAYADDLAALLD----ALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCCchhhhH-H-HHHHhhccccceEEEEecccCCCCCC-c-ccccHHHHHHHHHHHHH----HhCCCceEE
Confidence 457999999976555433 2 21222221 1999999999999997 1 10011111345555444 334446999
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
+||||||.+++.++.++++ .+.++|+++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999998 8999999997643
No 82
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.39 E-value=4.9e-12 Score=131.36 Aligned_cols=245 Identities=18% Similarity=0.125 Sum_probs=134.8
Q ss_pred CCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEE
Q 008049 116 PCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVV 195 (579)
Q Consensus 116 ~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv 195 (579)
+.+.+.+..+...+|..|....+.|.+. ..+.|.||.+||.++.+.. + ... ..++.+||.|+.
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~--------------~~~~Pavv~~hGyg~~~~~-~-~~~-~~~a~~G~~vl~ 114 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA--------------KGKLPAVVQFHGYGGRSGD-P-FDL-LPWAAAGYAVLA 114 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S--------------SSSEEEEEEE--TT--GGG-H-HHH-HHHHHTT-EEEE
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC--------------CCCcCEEEEecCCCCCCCC-c-ccc-cccccCCeEEEE
Confidence 3456667778888898888766666422 2567999999999665443 3 222 246788999999
Q ss_pred EcCCCCCCCCCCC--------CCCCC------------CCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHh
Q 008049 196 SNHRGLGGVSITS--------DCFYN------------AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLG 253 (579)
Q Consensus 196 ~D~RG~G~S~~~~--------~~~~~------------~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~ 253 (579)
+|.||+|+..... ..... .....|...+++++...- +..+|.+.|.|.||.+++..++
T Consensus 115 ~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aa 194 (320)
T PF05448_consen 115 MDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAA 194 (320)
T ss_dssp E--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred ecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHH
Confidence 9999999422110 00000 012368899999998653 2468999999999999999988
Q ss_pred hcCCCCCccEEEEEcCCc-ChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhc
Q 008049 254 EEGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATC 332 (579)
Q Consensus 254 ~~~~~~~v~a~V~is~p~-d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~ 332 (579)
-.+ +|++++...|.+ |.......-... . -...+..+++...... ....+.-+
T Consensus 195 Ld~---rv~~~~~~vP~l~d~~~~~~~~~~~---~-----~y~~~~~~~~~~d~~~------------~~~~~v~~---- 247 (320)
T PF05448_consen 195 LDP---RVKAAAADVPFLCDFRRALELRADE---G-----PYPEIRRYFRWRDPHH------------EREPEVFE---- 247 (320)
T ss_dssp HSS---T-SEEEEESESSSSHHHHHHHT--S---T-----TTHHHHHHHHHHSCTH------------CHHHHHHH----
T ss_pred hCc---cccEEEecCCCccchhhhhhcCCcc---c-----cHHHHHHHHhccCCCc------------ccHHHHHH----
Confidence 876 499998887643 332111000000 0 0011122222111000 00000000
Q ss_pred ccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHH
Q 008049 333 LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWV 412 (579)
Q Consensus 333 ~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~ 412 (579)
...| .+..+..+.|++|+++-.|-.|++||+...-.........+++.+++.+||-..-+ +-.
T Consensus 248 -------~L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~-------~~~ 310 (320)
T PF05448_consen 248 -------TLSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE-------FQE 310 (320)
T ss_dssp -------HHHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH-------HHH
T ss_pred -------HHhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh-------HHH
Confidence 0011 12335667899999999999999999985433233344568999999999954332 236
Q ss_pred HHHHHHHHh
Q 008049 413 RAVNEYLGV 421 (579)
Q Consensus 413 ~~v~eFL~~ 421 (579)
+...+||.+
T Consensus 311 ~~~~~~l~~ 319 (320)
T PF05448_consen 311 DKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 778888864
No 83
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.38 E-value=6.6e-13 Score=135.29 Aligned_cols=130 Identities=19% Similarity=0.165 Sum_probs=92.1
Q ss_pred CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HH------HHHHhCCCeEEEEcCCC
Q 008049 129 DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LV------FNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 129 DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~--l~------~~l~~~Gy~Vvv~D~RG 200 (579)
||..|+.|.+.| +.. .+...|+||..|++..+.....-.. .. ..++++||.||+.|.||
T Consensus 1 DGv~L~adv~~P-~~~------------~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG 67 (272)
T PF02129_consen 1 DGVRLAADVYRP-GAD------------GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRG 67 (272)
T ss_dssp TS-EEEEEEEEE---T------------TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TT
T ss_pred CCCEEEEEEEec-CCC------------CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcc
Confidence 899999999988 211 1366799999999954321111011 01 12899999999999999
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 201 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 201 ~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
.|.|++..... .....+|..++|+|+..+ | +.+|.++|.|++|...+..|+..+. .+++++..++..|...
T Consensus 68 ~g~S~G~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 68 TGGSEGEFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp STTS-S-B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred cccCCCccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 99998764332 334668999999999876 5 4589999999999999999887766 7999999988877764
No 84
>PRK10162 acetyl esterase; Provisional
Probab=99.37 E-value=4.5e-11 Score=124.68 Aligned_cols=246 Identities=11% Similarity=0.019 Sum_probs=138.8
Q ss_pred CceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHh-CCCeEEE
Q 008049 119 SYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVV 195 (579)
Q Consensus 119 ~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv 195 (579)
.-+...+...+| .+.+++|.|.. ...|+||++||.+ .++...+ ..++..+++ .|+.|+.
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~----------------~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~ 117 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQP----------------DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIG 117 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCC----------------CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEE
Confidence 334445666665 58889988732 2358999999943 1233334 566777776 5999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---C--CCCcEEEEEEchhHHHHHHHHhhcCC----CCCccEEEE
Q 008049 196 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAA 266 (579)
Q Consensus 196 ~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~---~--p~~~i~lvG~SlGG~ial~ya~~~~~----~~~v~a~V~ 266 (579)
+|||.....+ +. ...+|+.++++|+.+. + ...+++++|+|+||++++.++....+ ...+.++++
T Consensus 118 vdYrlape~~------~p-~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl 190 (318)
T PRK10162 118 IDYTLSPEAR------FP-QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLL 190 (318)
T ss_pred ecCCCCCCCC------CC-CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEE
Confidence 9999765432 11 2468999999998753 3 34589999999999999988764321 136889999
Q ss_pred EcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHh
Q 008049 267 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 346 (579)
Q Consensus 267 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~ 346 (579)
+++..+....... ..+. .... ..... .+..+...+.... ....+.+
T Consensus 191 ~~p~~~~~~~~s~-------~~~~---------------~~~~-~l~~~------~~~~~~~~y~~~~---~~~~~p~-- 236 (318)
T PRK10162 191 WYGLYGLRDSVSR-------RLLG---------------GVWD-GLTQQ------DLQMYEEAYLSND---ADRESPY-- 236 (318)
T ss_pred ECCccCCCCChhH-------HHhC---------------CCcc-ccCHH------HHHHHHHHhCCCc---cccCCcc--
Confidence 9887765321100 0000 0000 00000 0000111110000 0000000
Q ss_pred CCcc-cccCCCcccEEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccc-cccCcccHHHHHHHHHHhhc
Q 008049 347 CSSS-TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEG-LTAAGMWWVRAVNEYLGVLH 423 (579)
Q Consensus 347 ~s~~-~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~gfleg-~~~~~~w~~~~v~eFL~~~~ 423 (579)
.++. ..+..---|+++++|+.|++.+.. .+...+.+..-.+++.+++++.|--+.-. ..+...-..+.+.+||.+.+
T Consensus 237 ~~p~~~~l~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 237 YCLFNNDLTRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred cCcchhhhhcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 0010 112122359999999999998643 23334556667799999999999533221 11111234466777776654
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.34 E-value=5.4e-12 Score=124.08 Aligned_cols=186 Identities=15% Similarity=0.110 Sum_probs=115.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCCCCCC---CC----C---CCcHHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG-VSITSDC---FY----N---AGWTEDAREVIGYL 227 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~-S~~~~~~---~~----~---~~~~eDl~~~l~~l 227 (579)
.+.|.||++|++.|-. .+++.+++.|+++||.|+++|+-+-.. ....... .. . ....+|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3578999999997644 456899999999999999999754333 1111111 01 0 11246888889999
Q ss_pred HHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhc
Q 008049 228 HHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE 305 (579)
Q Consensus 228 ~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 305 (579)
+.+. ...+|.++|+|+||.+++.++.+. . .++++|..-++....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~--~~~a~v~~yg~~~~~------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-P--RVDAAVSFYGGSPPP------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T--TSSEEEEES-SSSGG-------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-c--ccceEEEEcCCCCCC-------------------------------
Confidence 8765 356899999999999999888876 3 588988775511000
Q ss_pred cccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcc---hHHHh
Q 008049 306 PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP---WDECR 382 (579)
Q Consensus 306 ~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~~~ 382 (579)
.......++++|+|+++|++|+.++.+... ..+..
T Consensus 136 ------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 136 ------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 000224567899999999999999987433 22345
Q ss_pred cCCCEEEEEeCCCCcccccccccc-Cc---ccHHHHHHHHHHhh
Q 008049 383 ANKNVVLATTWHGGHLAFFEGLTA-AG---MWWVRAVNEYLGVL 422 (579)
Q Consensus 383 ~~~~~~l~~~~~GGH~gfleg~~~-~~---~w~~~~v~eFL~~~ 422 (579)
.....++.++++++|--......+ ++ .-..+.+.+||++.
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 678899999999999544432211 11 12236677787654
No 86
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=7.7e-10 Score=110.29 Aligned_cols=207 Identities=17% Similarity=0.109 Sum_probs=139.0
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC-
Q 008049 122 RQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG- 200 (579)
Q Consensus 122 r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG- 200 (579)
...+..+| +.+..-+..|... ...|.||++|++.|-.. +++.+++.+++.||.|+++|+-+
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~---------------~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~ 65 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGA---------------GGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGR 65 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcC---------------CCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhcc
Confidence 34566677 6777667766442 22399999999966444 57999999999999999999877
Q ss_pred CCCCCCCC--CC---------CCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEE
Q 008049 201 LGGVSITS--DC---------FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAI 267 (579)
Q Consensus 201 ~G~S~~~~--~~---------~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~i 267 (579)
.|.+.... +. ........|+.++++++..+- ...+|.++|+||||.+++.++...++ ++++|+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~f 142 (236)
T COG0412 66 QGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAF 142 (236)
T ss_pred CCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEe
Confidence 34332211 10 001233479999999998654 24579999999999999999988774 8888866
Q ss_pred cCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhC
Q 008049 268 CSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC 347 (579)
Q Consensus 268 s~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~ 347 (579)
-+..-.
T Consensus 143 yg~~~~-------------------------------------------------------------------------- 148 (236)
T COG0412 143 YGGLIA-------------------------------------------------------------------------- 148 (236)
T ss_pred cCCCCC--------------------------------------------------------------------------
Confidence 322100
Q ss_pred CcccccCCCcccEEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccc----cccCc---ccHHHHHHH
Q 008049 348 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEG----LTAAG---MWWVRAVNE 417 (579)
Q Consensus 348 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~gfleg----~~~~~---~w~~~~v~e 417 (579)
.......++++|+|++.|+.|+.+|...... ........+.+.+++++.|--+-+. ..-++ .-..+.+.+
T Consensus 149 ~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ 228 (236)
T COG0412 149 DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLA 228 (236)
T ss_pred CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHH
Confidence 0001146789999999999999999874432 2223334788999999889554331 11111 123367888
Q ss_pred HHHhhc
Q 008049 418 YLGVLH 423 (579)
Q Consensus 418 FL~~~~ 423 (579)
||++.+
T Consensus 229 ff~~~~ 234 (236)
T COG0412 229 FFKRLL 234 (236)
T ss_pred HHHHhc
Confidence 887764
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.24 E-value=1.8e-10 Score=125.66 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=84.0
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008049 161 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 234 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~ 234 (579)
+..||++|.+- ...|| ++++++|.++||+|+++|+++-+.... ......+.+.+.++++.+++..+..
T Consensus 215 ~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 215 ARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 34588999874 33444 689999999999999999998665421 1111334568899999999988888
Q ss_pred cEEEEEEchhHHHHHH----HHhhcCCCCCccEEEEEcCCcChhh
Q 008049 235 PLFAIGTSIGANILVK----YLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 235 ~i~lvG~SlGG~ial~----ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
++.++|+||||.+++. |++.+++ .+|+.++++.++.|+..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~-~~V~sltllatplDf~~ 332 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQL-RKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCC-CceeeEEeeecccccCC
Confidence 9999999999999886 6777663 27999999999998763
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.23 E-value=2.3e-10 Score=112.53 Aligned_cols=182 Identities=22% Similarity=0.159 Sum_probs=98.1
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHH-HHHhCCCeEEEEcCCC------CCCC--CCCC-CCCCCC--CcHHHH-----
Q 008049 158 DDTTPIAIVIPGLTSDSAASYIRHLVF-NTAKRGWNVVVSNHRG------LGGV--SITS-DCFYNA--GWTEDA----- 220 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi~~l~~-~l~~~Gy~Vvv~D~RG------~G~S--~~~~-~~~~~~--~~~eDl----- 220 (579)
++.+|+||++||+ |++...+ ..+.. .+.....+++.++-+- .|.. ..-. ...... ...+++
T Consensus 11 ~~~~~lvi~LHG~-G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--T-TS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 4678999999999 5555433 33333 1223456777776542 1210 0000 000000 112333
Q ss_pred --HHHHHHHHHH-CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhH
Q 008049 221 --REVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL 297 (579)
Q Consensus 221 --~~~l~~l~~~-~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l 297 (579)
.++++...+. .+..++++.|+|.||++++.++..+++ ++.++|++|+......
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~---------------------- 144 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPES---------------------- 144 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGC----------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeeccccccc----------------------
Confidence 3333333222 255689999999999999999999998 8999999986432100
Q ss_pred HHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcc
Q 008049 298 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 377 (579)
Q Consensus 298 ~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 377 (579)
.+. . ...... ++|++++||.+|+++|.+...
T Consensus 145 ---------------~~~------------~--------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 145 ---------------ELE------------D--------------------RPEALA--KTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp ---------------CCH------------C--------------------CHCCCC--TS-EEEEEETT-SSSTHHHHH
T ss_pred ---------------ccc------------c--------------------cccccC--CCcEEEEecCCCCcccHHHHH
Confidence 000 0 000111 689999999999999976332
Q ss_pred ---hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 378 ---WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 378 ---~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
..+.....++++..++++||-..-+ ..+.+.+||++.
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~~~--------~~~~~~~~l~~~ 215 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEISPE--------ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS--HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCCHH--------HHHHHHHHHhhh
Confidence 2344556689999999999955333 556788888764
No 89
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=1.3e-10 Score=113.79 Aligned_cols=242 Identities=17% Similarity=0.170 Sum_probs=148.7
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEE
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 196 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 196 (579)
.++--+.+++..+|..|..+...| ... ....|.||-.||++|+..++ ..+. .++..||.|+++
T Consensus 53 ~ve~ydvTf~g~~g~rI~gwlvlP-~~~-------------~~~~P~vV~fhGY~g~~g~~--~~~l-~wa~~Gyavf~M 115 (321)
T COG3458 53 RVEVYDVTFTGYGGARIKGWLVLP-RHE-------------KGKLPAVVQFHGYGGRGGEW--HDML-HWAVAGYAVFVM 115 (321)
T ss_pred ceEEEEEEEeccCCceEEEEEEee-ccc-------------CCccceEEEEeeccCCCCCc--cccc-cccccceeEEEE
Confidence 344456677778999998644444 321 26789999999998766542 2333 345579999999
Q ss_pred cCCCCCCCCCCCC---------------------CCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHh
Q 008049 197 NHRGLGGVSITSD---------------------CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLG 253 (579)
Q Consensus 197 D~RG~G~S~~~~~---------------------~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~ 253 (579)
|-||.|.+...+. ..|-.+...|+..+++.+.... ...+|.+.|.|.||.+++..++
T Consensus 116 dvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaa 195 (321)
T COG3458 116 DVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAA 195 (321)
T ss_pred ecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhh
Confidence 9999998733111 0111233468888888887655 3578999999999999998887
Q ss_pred hcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcc
Q 008049 254 EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL 333 (579)
Q Consensus 254 ~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~ 333 (579)
..+ +|++++++-|-..-. .+.++- ....-| ..+..+.+.|.+. +..-.+++.-||
T Consensus 196 l~~---rik~~~~~~Pfl~df--~r~i~~-~~~~~y-----dei~~y~k~h~~~--------e~~v~~TL~yfD------ 250 (321)
T COG3458 196 LDP---RIKAVVADYPFLSDF--PRAIEL-ATEGPY-----DEIQTYFKRHDPK--------EAEVFETLSYFD------ 250 (321)
T ss_pred cCh---hhhcccccccccccc--hhheee-cccCcH-----HHHHHHHHhcCch--------HHHHHHHHhhhh------
Confidence 766 488888775533211 011100 000011 1234455444432 000011222121
Q ss_pred cCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHH
Q 008049 334 VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVR 413 (579)
Q Consensus 334 ~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~ 413 (579)
+.+..+.|++|+|+.-|..|++||+...-.........+.+.+++.-+|.+.-. .-.+
T Consensus 251 ---------------~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p~-------~~~~ 308 (321)
T COG3458 251 ---------------IVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGPG-------FQSR 308 (321)
T ss_pred ---------------hhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCcc-------hhHH
Confidence 335567899999999999999999985433233344456677777777865332 3456
Q ss_pred HHHHHHHhh
Q 008049 414 AVNEYLGVL 422 (579)
Q Consensus 414 ~v~eFL~~~ 422 (579)
.+..|++..
T Consensus 309 ~~~~~l~~l 317 (321)
T COG3458 309 QQVHFLKIL 317 (321)
T ss_pred HHHHHHHhh
Confidence 677787654
No 90
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.20 E-value=1.2e-10 Score=117.93 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=95.5
Q ss_pred CCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCCeEEEEcCC----CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC---
Q 008049 160 TTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--- 231 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--- 231 (579)
...+|||+.|++.+-.. .|+..+++.|.+.||.++-+.++ |+|-+.+. ..++|+.++|+|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~-------~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLD-------RDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HH-------HHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhh-------hHHHHHHHHHHHHHHhhccc
Confidence 34579999999765443 78899999998889999999876 44443322 35789999999999883
Q ss_pred -CCCcEEEEEEchhHHHHHHHHhhcCC---CCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhc--
Q 008049 232 -PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE-- 305 (579)
Q Consensus 232 -p~~~i~lvG~SlGG~ial~ya~~~~~---~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~-- 305 (579)
...+|+++|||-|..-++.|+..... ..+|+|+|+-+|..|-......... +..+.+.+.. .++.+...+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~---~~~~~~~v~~-A~~~i~~g~~~ 180 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE---REAYEELVAL-AKELIAEGKGD 180 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH------HHHHHHH-HHHHHHCT-TT
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc---hHHHHHHHHH-HHHHHHcCCCC
Confidence 46789999999999999999987653 3579999999988776543222211 0111111110 011111110
Q ss_pred cccccccChhHh-hccCCHHHHHhhhhcccCCCCCHHHHHHhC----CcccccCCCcccEEEEEeCCCCCCCCCCc----
Q 008049 306 PRYSRLANWEGI-KKSRSIRDFDSHATCLVGKFETVDTYYRNC----SSSTYVGNVSIPLLCISSLDDPVCTVEAI---- 376 (579)
Q Consensus 306 ~~~~~~~d~~~i-~~~~sl~efd~~~t~~~~g~~s~~~yy~~~----s~~~~l~~I~vPvLiI~g~dDpivp~~~~---- 376 (579)
..++........ ...-+-..|-.. .....-++||... .....+..|++|+|++.++.|..||...-
T Consensus 181 ~~lp~~~~~~~~~~~PiTA~Rf~SL-----~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~L 255 (303)
T PF08538_consen 181 EILPREFTPLVFYDTPITAYRFLSL-----ASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEAL 255 (303)
T ss_dssp -GG----GGTTT-SS---HHHHHT------S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred ceeeccccccccCCCcccHHHHHhc-----cCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccc
Confidence 000000000000 001111122111 1111233444322 11245677889999999999999997521
Q ss_pred -chHHHhcCC---CEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008049 377 -PWDECRANK---NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 420 (579)
Q Consensus 377 -~~~~~~~~~---~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~ 420 (579)
.+.....++ .....+++++.|..--++-.....|+.++|..||+
T Consensus 256 l~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 256 LERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 111111111 12245889999965432211123588999999874
No 91
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.20 E-value=1.3e-10 Score=124.44 Aligned_cols=111 Identities=19% Similarity=0.207 Sum_probs=82.8
Q ss_pred CCCcEEEEECCCCCCC-ccHHHHHHHHHHHh--CCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CC
Q 008049 159 DTTPIAIVIPGLTSDS-AASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PK 233 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s-~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--p~ 233 (579)
..+|++|++||+.++. .+.|+..++..+.. ..|+|+++|++|+|.+.......+.....+++.++++++.... +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 5678999999997543 34565667776653 3699999999999987654322222223467888888886543 45
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
.++++|||||||.++..++...+. +|.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCC
Confidence 789999999999999988887776 799999998753
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.19 E-value=2e-10 Score=121.87 Aligned_cols=249 Identities=14% Similarity=0.181 Sum_probs=137.9
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
|.||++.-+.| ......+.+++.|.+ |+.|++.|+.--+..+.....+....+++-+.++++++ +. ++.++|+
T Consensus 103 ~pvLiV~Pl~g-~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~Gv 175 (406)
T TIGR01849 103 PAVLIVAPMSG-HYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIAV 175 (406)
T ss_pred CcEEEEcCCch-HHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEEE
Confidence 67889998854 444456999999999 99999999987776543333332223333344444333 33 4999999
Q ss_pred chhHHHHHHHHhhcCC---CCCccEEEEEcCCcChhhhhHHHhhh--------HHHH---------------HHHHH-HH
Q 008049 242 SIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRR--------LIQK---------------IYDRA-LT 294 (579)
Q Consensus 242 SlGG~ial~ya~~~~~---~~~v~a~V~is~p~d~~~~~~~l~~~--------~~~~---------------~~~~~-l~ 294 (579)
++||..++.+++...+ ..+++.++++++|.|.......+... +... .|... +.
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 9999998877665422 22699999999999986532111110 0000 01000 00
Q ss_pred HhH-----HHHHhhhcccccccc--ChhHhhccCCHHHHHhhhhcc--cCC--C-CCHHHHHHhCCcc----------cc
Q 008049 295 IGL-----QDYAQLHEPRYSRLA--NWEGIKKSRSIRDFDSHATCL--VGK--F-ETVDTYYRNCSSS----------TY 352 (579)
Q Consensus 295 ~~l-----~~~~~~~~~~~~~~~--d~~~i~~~~sl~efd~~~t~~--~~g--~-~s~~~yy~~~s~~----------~~ 352 (579)
..+ .+....+...+.... +.+. ......|.+.+... +.+ | +.+++.|+..... -.
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~---~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vd 332 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQE---ADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVD 332 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcch---HHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEec
Confidence 000 000000110000000 0000 01111122211110 011 1 2344555544322 25
Q ss_pred cCCCc-ccEEEEEeCCCCCCCCCCcchH--HH--hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 353 VGNVS-IPLLCISSLDDPVCTVEAIPWD--EC--RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 353 l~~I~-vPvLiI~g~dDpivp~~~~~~~--~~--~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
+.+|+ +|+|.|.|++|.|+|++..... ++ .........+.++|||+|.+.|....+ .+.-.|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~-~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFRE-EIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhh-hhchHHHHHHHh
Confidence 67898 9999999999999999855432 22 133456677788999999998744322 244678888864
No 93
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.19 E-value=2.8e-10 Score=131.02 Aligned_cols=231 Identities=12% Similarity=0.045 Sum_probs=131.7
Q ss_pred HHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC----------------CCCcEEEEEEchh
Q 008049 181 HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----------------PKAPLFAIGTSIG 244 (579)
Q Consensus 181 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~----------------p~~~i~lvG~SlG 244 (579)
.+..+++++||.|++.|.||+|+|++... .+.....+|..++|+|+..+. .+.+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 45678999999999999999999987532 233456789999999998531 2569999999999
Q ss_pred HHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHH--HHHHHHHHHhHHHHHhhhccccccccChhHhhccCC
Q 008049 245 ANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ--KIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRS 322 (579)
Q Consensus 245 G~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~s 322 (579)
|.+++..|+..++ .++++|.+++..+....-. ....+. ..+...-...+...................... ..
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr--~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~-~~ 423 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYR--ENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACE-KL 423 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhh--cCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHH-HH
Confidence 9999988888777 6999998877654321100 000000 000000000000000000000000000000000 00
Q ss_pred HHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCc-chH--HHhcCCCEEEEEeCCCCccc
Q 008049 323 IRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAI-PWD--ECRANKNVVLATTWHGGHLA 399 (579)
Q Consensus 323 l~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~-~~~--~~~~~~~~~l~~~~~GGH~g 399 (579)
+.++...... .. ....+||...+....+++|++|+|+|||..|..++++.. ... +.....+.++++. .+||..
T Consensus 424 ~~~~~~~~~~-~~--~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~ 499 (767)
T PRK05371 424 LAELTAAQDR-KT--GDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVY 499 (767)
T ss_pred Hhhhhhhhhh-cC--CCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccC
Confidence 0000000000 01 234578888888888999999999999999999987532 221 2222445667655 568864
Q ss_pred cccccccCcccHHHHHHHHHHhhcC
Q 008049 400 FFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 400 fleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
... ..+.-+.+.+.+||+..+.
T Consensus 500 ~~~---~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 500 PNN---WQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CCc---hhHHHHHHHHHHHHHhccc
Confidence 332 1122356778899988754
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.18 E-value=6.6e-11 Score=120.75 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=81.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHH-hCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCc
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~-~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~--~p~~~ 235 (579)
..+|++|++||+.++....|...+...+. ..+|+|+++|++|++...............+++.++++++.+. .+..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 55789999999987664555566666554 4589999999999843321111000112236888889988776 34568
Q ss_pred EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 236 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
+++|||||||.++..++...++ +|.+++.++|..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCc
Confidence 9999999999999999988887 799999998754
No 95
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=1.2e-09 Score=112.31 Aligned_cols=114 Identities=19% Similarity=0.153 Sum_probs=80.0
Q ss_pred CCCcEEEEECCCCCCCcc-H--------HHHHHHH---HHHhCCCeEEEEcCCCCC-CCCCCCC---C--CC----CCCc
Q 008049 159 DTTPIAIVIPGLTSDSAA-S--------YIRHLVF---NTAKRGWNVVVSNHRGLG-GVSITSD---C--FY----NAGW 216 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~-~--------yi~~l~~---~l~~~Gy~Vvv~D~RG~G-~S~~~~~---~--~~----~~~~ 216 (579)
+...+||+|||++|+++. . |+..++. .+--..|-|++.|..|.+ +|..+.. . .| ..-.
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 344679999999986543 1 3344432 123345999999999943 5543322 1 11 1123
Q ss_pred HHHHHHHHHHHHHHCCCCcEE-EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh
Q 008049 217 TEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~~i~-lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
++|...+-..+.+..+-+++. +||-||||+.++..+..+|+ +|..++.++++....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccCC
Confidence 467777777777888877876 99999999999999999999 899999998866544
No 96
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.13 E-value=1.1e-09 Score=105.95 Aligned_cols=250 Identities=16% Similarity=0.148 Sum_probs=128.2
Q ss_pred eEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC
Q 008049 121 RRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 121 ~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 200 (579)
..+.+...||.+|+++--.|.... ....++||+.+|+ |..-..| ..++.+|+.+||+|+.+|.--
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~~-------------~~~~~tiliA~Gf-~rrmdh~-agLA~YL~~NGFhViRyDsl~ 67 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNNE-------------PKRNNTILIAPGF-ARRMDHF-AGLAEYLSANGFHVIRYDSLN 67 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TTS----------------S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B
T ss_pred ccceeEcCCCCEEEEeccCCCCCC-------------cccCCeEEEecch-hHHHHHH-HHHHHHHhhCCeEEEeccccc
Confidence 356788999999998544443322 2556899999999 4555566 789999999999999999987
Q ss_pred C-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHH
Q 008049 201 L-GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF 279 (579)
Q Consensus 201 ~-G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~ 279 (579)
| |.|++.-.++......+|+..+++|++ +.+..++.++..|+-|-+|.+.+++- . +.-+|..-+..++....
T Consensus 68 HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i-~---lsfLitaVGVVnlr~TL-- 140 (294)
T PF02273_consen 68 HVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI-N---LSFLITAVGVVNLRDTL-- 140 (294)
T ss_dssp -------------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHH--
T ss_pred cccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc-C---cceEEEEeeeeeHHHHH--
Confidence 6 667665443332334589999999999 55666899999999999999999854 2 55555554555542211
Q ss_pred HhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCccc
Q 008049 280 IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIP 359 (579)
Q Consensus 280 l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vP 359 (579)
.+.+.. .++......++...|.+...- .-.-|... +...+|.+... ....++.+.+|
T Consensus 141 ----------e~al~~---Dyl~~~i~~lp~dldfeGh~l--~~~vFv~d--c~e~~w~~l~S------T~~~~k~l~iP 197 (294)
T PF02273_consen 141 ----------EKALGY---DYLQLPIEQLPEDLDFEGHNL--GAEVFVTD--CFEHGWDDLDS------TINDMKRLSIP 197 (294)
T ss_dssp ----------HHHHSS----GGGS-GGG--SEEEETTEEE--EHHHHHHH--HHHTT-SSHHH------HHHHHTT--S-
T ss_pred ----------HHHhcc---chhhcchhhCCCccccccccc--chHHHHHH--HHHcCCccchh------HHHHHhhCCCC
Confidence 111100 122222222222222211000 00011111 11245555432 33678889999
Q ss_pred EEEEEeCCCCCCCCCCcchHH-HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 360 LLCISSLDDPVCTVEAIPWDE-CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 360 vLiI~g~dDpivp~~~~~~~~-~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
++.++|.+|.+|....+.... ....+..++...++.+|-- -| -...+..|.+++.+
T Consensus 198 ~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL-~e--------nl~vlrnfy~svtk 254 (294)
T PF02273_consen 198 FIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL-GE--------NLVVLRNFYQSVTK 254 (294)
T ss_dssp EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T-TS--------SHHHHHHHHHHHHH
T ss_pred EEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh-hh--------ChHHHHHHHHHHHH
Confidence 999999999999876554322 2356778999999999932 11 23556677777644
No 97
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.12 E-value=4.7e-09 Score=104.36 Aligned_cols=126 Identities=16% Similarity=0.229 Sum_probs=90.7
Q ss_pred EEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 008049 125 FRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 204 (579)
Q Consensus 125 l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 204 (579)
+...+|..+.++-..... .+......+||-+||-+|++.. ++.+...|.+.|+|++.+|+||+|.+
T Consensus 11 ~~~~~~~~~~~~a~y~D~------------~~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t 76 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDS------------LPSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFT 76 (297)
T ss_pred cccccCceEEEEEEEEec------------CCCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCC
Confidence 344578888776544321 1223455689999999887665 47888999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 205 SITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 205 ~~~~~~~~~~~~~eDl~~~l~~l~~~~p-~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
+......|+. ++-...++.+.++.. ..+++++|||.|+-.|+.++..++ ..|+++++++.
T Consensus 77 ~~~~~~~~~n---~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 77 PGYPDQQYTN---EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred CCCcccccCh---HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 8765554442 333333444433332 468999999999999999999884 56999998764
No 98
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.10 E-value=1.2e-09 Score=118.85 Aligned_cols=138 Identities=17% Similarity=0.115 Sum_probs=106.9
Q ss_pred CceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEEC--CCC---CCCccHHHHHHHH---HHHhCC
Q 008049 119 SYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIP--GLT---SDSAASYIRHLVF---NTAKRG 190 (579)
Q Consensus 119 ~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllH--Gl~---G~s~~~yi~~l~~---~l~~~G 190 (579)
-++.+.++|.||.+|+.|.|.|.+. ...|+++..+ -+. |.... ...... .++.+|
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~---------------g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~G 80 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGA---------------GPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQG 80 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCC---------------CCCceeEEeeccccccccccCcc--hhhcccccceeecCc
Confidence 4466889999999999999988542 4568888888 110 00111 112333 578899
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcC
Q 008049 191 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 269 (579)
Q Consensus 191 y~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~-~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~ 269 (579)
|.||..|.||.|.|++.....+. ...+|-.++|+||.++ ..+.++..+|.|++|...+..|+..+. .+++++..++
T Consensus 81 YavV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~ 157 (563)
T COG2936 81 YAVVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEG 157 (563)
T ss_pred eEEEEecccccccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeeccccc
Confidence 99999999999999987665555 5778999999999764 357899999999999999999998877 6888888888
Q ss_pred CcChhhh
Q 008049 270 PWDLLIG 276 (579)
Q Consensus 270 p~d~~~~ 276 (579)
.+|....
T Consensus 158 ~~D~y~d 164 (563)
T COG2936 158 LVDRYRD 164 (563)
T ss_pred ccccccc
Confidence 8886543
No 99
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.06 E-value=1.5e-09 Score=102.71 Aligned_cols=157 Identities=17% Similarity=0.203 Sum_probs=95.0
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEE
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGT 241 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~ 241 (579)
|+++||++|+....|...+.+.+... ++|-..|+ ..| |+.+.++.+.+.. .+.+.++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~~P---------~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW--------DNP---------DLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC----------TS-----------HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc--------CCC---------CHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999999888888877788888776 77776665 111 2344444444432 2457999999
Q ss_pred chhHHHHHHHHh-hcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhcc
Q 008049 242 SIGANILVKYLG-EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 320 (579)
Q Consensus 242 SlGG~ial~ya~-~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~ 320 (579)
|+|+..+++|++ .... +|.|+++++++...... ...+.
T Consensus 63 SLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~~--------------------------~~~~~------------- 101 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDPE--------------------------PFPPE------------- 101 (171)
T ss_dssp THHHHHHHHHHHHTCCS--SEEEEEEES--SCGCHH--------------------------CCTCG-------------
T ss_pred CHHHHHHHHHHhhcccc--cccEEEEEcCCCccccc--------------------------chhhh-------------
Confidence 999999999995 3444 89999999876321000 00000
Q ss_pred CCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccc
Q 008049 321 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAF 400 (579)
Q Consensus 321 ~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gf 400 (579)
...|.. .....+.+|.++|.++|||++|.+..... +... +++++.++++||+.-
T Consensus 102 -------------~~~f~~-----------~p~~~l~~~~~viaS~nDp~vp~~~a~~~-A~~l-~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 102 -------------LDGFTP-----------LPRDPLPFPSIVIASDNDPYVPFERAQRL-AQRL-GAELIILGGGGHFNA 155 (171)
T ss_dssp -------------GCCCTT-----------SHCCHHHCCEEEEEETTBSSS-HHHHHHH-HHHH-T-EEEEETS-TTSSG
T ss_pred -------------cccccc-----------CcccccCCCeEEEEcCCCCccCHHHHHHH-HHHc-CCCeEECCCCCCccc
Confidence 001110 01123456779999999999998755432 3332 678999999999987
Q ss_pred ccccc
Q 008049 401 FEGLT 405 (579)
Q Consensus 401 leg~~ 405 (579)
-+|..
T Consensus 156 ~~G~~ 160 (171)
T PF06821_consen 156 ASGFG 160 (171)
T ss_dssp GGTHS
T ss_pred ccCCC
Confidence 77643
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.03 E-value=8e-09 Score=93.67 Aligned_cols=165 Identities=14% Similarity=0.143 Sum_probs=117.8
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCC--CCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 239 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S--~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lv 239 (579)
-+||+-||-+++.++..+...+..++..||.|+.|+++=...- ....+..-..........++..++......|+++-
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 4789999998888888889999999999999999997542211 11111111112223445555667776666799999
Q ss_pred EEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhc
Q 008049 240 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 319 (579)
Q Consensus 240 G~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~ 319 (579)
|+||||-++...+.+-.- +|+++++++-|+....-. +.
T Consensus 95 GkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGKP-------------------------------------e~--- 132 (213)
T COG3571 95 GKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGKP-------------------------------------EQ--- 132 (213)
T ss_pred cccccchHHHHHHHhhcC--CcceEEEecCccCCCCCc-------------------------------------cc---
Confidence 999999999988887665 699999998765432100 00
Q ss_pred cCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008049 320 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 398 (579)
Q Consensus 320 ~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 398 (579)
. ....+..+++|+||.+|+.|++-..+.+. -...++.++++.++++-|-
T Consensus 133 ~----------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~adHD 181 (213)
T COG3571 133 L----------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDADHD 181 (213)
T ss_pred c----------------------------hhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCccc
Confidence 0 01457788999999999999998766442 3456788999999999993
No 101
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.02 E-value=7.9e-10 Score=107.69 Aligned_cols=102 Identities=21% Similarity=0.174 Sum_probs=71.4
Q ss_pred EEEECCCC--CCCccHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-----CCCCc
Q 008049 164 AIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-----YPKAP 235 (579)
Q Consensus 164 VlllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~-----~p~~~ 235 (579)
||++||.+ .++.+.. ..++..+++ .|+.|+++|||=.... ......+|+.++++|+.+. ++..+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~~-------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPEA-------PFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTTS-------STTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccccc-------cccccccccccceeeeccccccccccccc
Confidence 68999842 2223333 456666664 8999999999944322 1234679999999999987 56679
Q ss_pred EEEEEEchhHHHHHHHHhhcCCC--CCccEEEEEcCCcCh
Q 008049 236 LFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDL 273 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~--~~v~a~V~is~p~d~ 273 (579)
|+++|+|.||++++.++....+. ..++++++++|..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999888654432 358999999997766
No 102
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.00 E-value=1.2e-08 Score=106.06 Aligned_cols=130 Identities=16% Similarity=0.075 Sum_probs=90.6
Q ss_pred EcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q 008049 126 RLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 203 (579)
Q Consensus 126 ~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 203 (579)
...++..+.+++|.| ... .....|+||++||.+ .++....-..+...+...|+.|+++|||-...
T Consensus 57 ~~~~~~~~~~~~y~p-~~~------------~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe 123 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRK------------AAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPE 123 (312)
T ss_pred cCCCCCceeEEEECC-CCC------------CCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCC
Confidence 445666678899987 211 125679999999832 22333332345556677899999999995443
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHHHC-----CCCcEEEEEEchhHHHHHHHHhhcCCC--CCccEEEEEcCCcChhh
Q 008049 204 VSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDLLI 275 (579)
Q Consensus 204 S~~~~~~~~~~~~~eDl~~~l~~l~~~~-----p~~~i~lvG~SlGG~ial~ya~~~~~~--~~v~a~V~is~p~d~~~ 275 (579)
- ......+|+.+++.++.++. ...+|+++|+|.||++++.++....+. ....+.+++++..|...
T Consensus 124 ~-------~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 124 H-------PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred C-------CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 2 12246789999999998763 256899999999999999877654431 24778888988777653
No 103
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.94 E-value=2.8e-08 Score=98.99 Aligned_cols=103 Identities=20% Similarity=0.287 Sum_probs=80.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC----C--
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----P-- 232 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~----p-- 232 (579)
..-|+|||+||+. ...++| ..+.++++++||.||.+|+...+... .....+++.++++|+.+.. +
T Consensus 15 g~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~-------~~~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 15 GTYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGGPD-------DTDEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred CCcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCCCC-------cchhHHHHHHHHHHHHhcchhhcccc
Confidence 5679999999995 677777 89999999999999999977644421 1235678889999986632 1
Q ss_pred ----CCcEEEEEEchhHHHHHHHHhhcCC---CCCccEEEEEcCC
Q 008049 233 ----KAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSP 270 (579)
Q Consensus 233 ----~~~i~lvG~SlGG~ial~ya~~~~~---~~~v~a~V~is~p 270 (579)
-.++.+.|||-||-++...+..+.+ ..+++++++++|.
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 2489999999999999988877632 2379999999764
No 104
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.90 E-value=8.8e-09 Score=117.03 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=71.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC---------CCC--CC-C-----------CCc
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT---------SDC--FY-N-----------AGW 216 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~---------~~~--~~-~-----------~~~ 216 (579)
..|+||++||++++. ..| ..++..|.++||+|+++|+||||.+... ... .| + ...
T Consensus 448 g~P~VVllHG~~g~~-~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAK-ENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCH-HHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 357999999996644 445 6889999999999999999999998443 110 01 1 122
Q ss_pred HHHHHHHHHHHH------HH------CCCCcEEEEEEchhHHHHHHHHhhc
Q 008049 217 TEDAREVIGYLH------HE------YPKAPLFAIGTSIGANILVKYLGEE 255 (579)
Q Consensus 217 ~eDl~~~l~~l~------~~------~p~~~i~lvG~SlGG~ial~ya~~~ 255 (579)
+.|+..+...++ .. ++..+++++||||||.++..|+...
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 368888888887 33 5677999999999999999998753
No 105
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.90 E-value=4.2e-08 Score=101.00 Aligned_cols=107 Identities=19% Similarity=0.187 Sum_probs=79.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHH-HHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-----------CCcHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHL-VFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-----------AGWTEDAREVIGY 226 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l-~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-----------~~~~eDl~~~l~~ 226 (579)
+.+|++|.++|- |+...+.-+.+ +..|.++|+..+++..+=||.-......-.. .+...+...++.|
T Consensus 90 ~~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 568999999997 66665554555 7889999999999999999875432111100 1224688889999
Q ss_pred HHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcC
Q 008049 227 LHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 269 (579)
Q Consensus 227 l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~ 269 (579)
+..+ +..++.+.|.||||.+|...++..|. ++..+-++++
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 9888 66799999999999999988888887 6665555543
No 106
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.89 E-value=5.3e-09 Score=85.89 Aligned_cols=46 Identities=24% Similarity=0.501 Sum_probs=40.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT 207 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 207 (579)
.+.+|+++||+ +.....| ..+++.|+++||.|+++|+||||.|+..
T Consensus 15 ~k~~v~i~HG~-~eh~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~ 60 (79)
T PF12146_consen 15 PKAVVVIVHGF-GEHSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGK 60 (79)
T ss_pred CCEEEEEeCCc-HHHHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCc
Confidence 47899999999 4555567 8999999999999999999999999853
No 107
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.88 E-value=1.5e-07 Score=97.92 Aligned_cols=253 Identities=13% Similarity=0.075 Sum_probs=140.5
Q ss_pred EEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHH-HhCCCeEEEEcCCC
Q 008049 125 FRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNT-AKRGWNVVVSNHRG 200 (579)
Q Consensus 125 l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~---G~s~~~yi~~l~~~l-~~~Gy~Vvv~D~RG 200 (579)
++....+.+....|.|....+ ....|+||++||.+ |+........+...+ .+.+..|+.+|||=
T Consensus 66 v~~~~~~~l~vRly~P~~~~~------------~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL 133 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSSS------------ETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL 133 (336)
T ss_pred eEecCCCCeEEEEEcCCCCCc------------ccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc
Confidence 344445556777777654321 15779999999953 221222226666666 45699999999995
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHHHHH------CCCCcEEEEEEchhHHHHHHHHhhcC----CCCCccEEEEEcCC
Q 008049 201 LGGVSITSDCFYNAGWTEDAREVIGYLHHE------YPKAPLFAIGTSIGANILVKYLGEEG----EKTPVAGAAAICSP 270 (579)
Q Consensus 201 ~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~------~p~~~i~lvG~SlGG~ial~ya~~~~----~~~~v~a~V~is~p 270 (579)
--..+. ....+|..+++.|+.+. ...++++++|-|.|||+|..++.+.. ...+++|.|++-|.
T Consensus 134 APEh~~-------Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 134 APEHPF-------PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CCCCCC-------CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 443322 23458888888888764 23457999999999999988776543 23479999999887
Q ss_pred cChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcc
Q 008049 271 WDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 350 (579)
Q Consensus 271 ~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~ 350 (579)
+........-.+.. ..............+.+.. ++... ...+..+..+... +..
T Consensus 207 ~~~~~~~~~e~~~~-~~~~~~~~~~~~~~~w~~~---lP~~~-----------~~~~~p~~np~~~-----------~~~ 260 (336)
T KOG1515|consen 207 FQGTDRTESEKQQN-LNGSPELARPKIDKWWRLL---LPNGK-----------TDLDHPFINPVGN-----------SLA 260 (336)
T ss_pred cCCCCCCCHHHHHh-hcCCcchhHHHHHHHHHHh---CCCCC-----------CCcCCcccccccc-----------ccc
Confidence 65443211100000 0000000000000000000 00000 0001110000000 011
Q ss_pred cccCCCcc-cEEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccc-cCcccHHHHHHHHHHhh
Q 008049 351 TYVGNVSI-PLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLT-AAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 351 ~~l~~I~v-PvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~-~~~~w~~~~v~eFL~~~ 422 (579)
.......+ |+|++.++.|.+.... .+...+....-.+++..+++|+|..++-... +...-+.+.+.+|++..
T Consensus 261 ~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 261 KDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 12223344 5999999999998765 2334456666677788899999998876422 12234667788887653
No 108
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.86 E-value=1.1e-06 Score=87.54 Aligned_cols=271 Identities=13% Similarity=0.144 Sum_probs=158.2
Q ss_pred ceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH-----HHHHHhCCCeEE
Q 008049 120 YRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL-----VFNTAKRGWNVV 194 (579)
Q Consensus 120 y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l-----~~~l~~~Gy~Vv 194 (579)
.+.+.+.+.- |.++.-.+..+ ++.+|++|-.|.++-++.+.+ ..+ +..+.++ |.++
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~----------------~~~kpaiiTyhDlglN~~scF-q~ff~~p~m~ei~~~-fcv~ 82 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDP----------------KGNKPAIITYHDLGLNHKSCF-QGFFNFPDMAEILEH-FCVY 82 (326)
T ss_pred ceeeeecccc-ccEEEEEecCC----------------CCCCceEEEecccccchHhHh-HHhhcCHhHHHHHhh-eEEE
Confidence 4566677766 45555544321 146788999999855555433 332 2344555 9999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh
Q 008049 195 VSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 195 v~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
-+|.+|+-.-...-+..|.+-..+|+.+.+-.+...+.-.-++.+|.-.||+|+.+||..+|+ +|.|+|+|++-....
T Consensus 83 HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~ 160 (326)
T KOG2931|consen 83 HVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAK 160 (326)
T ss_pred ecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCc
Confidence 999999854333333333333456666665555555555679999999999999999999999 999999998766554
Q ss_pred hhhHHHhhhHH-HHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCccccc
Q 008049 275 IGDRFIGRRLI-QKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 353 (579)
Q Consensus 275 ~~~~~l~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l 353 (579)
...++...++. ..++...+...+..++-.|.-.-..... ...-+.+....+... .+-.++..|.........+
T Consensus 161 gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~-----~~diVq~Yr~~l~~~-~N~~Nl~~fl~ayn~R~DL 234 (326)
T KOG2931|consen 161 GWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN-----NSDIVQEYRQHLGER-LNPKNLALFLNAYNGRRDL 234 (326)
T ss_pred hHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc-----cHHHHHHHHHHHHhc-CChhHHHHHHHHhcCCCCc
Confidence 44444333332 2334445566666665443321111110 011112222222111 2223444444444333222
Q ss_pred --------CCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 354 --------GNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 354 --------~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
..++||+|++.|..-|.+.... .-.......++.++.+.++|=+...+ .|.+ +.+.+.=|++-.
T Consensus 235 ~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv-~~n~~Ldp~~ttllk~~d~g~l~~e~--qP~k--l~ea~~~FlqG~ 306 (326)
T KOG2931|consen 235 SIERPKLGTTLKCPVLLVVGDNSPHVSAVV-ECNSKLDPTYTTLLKMADCGGLVQEE--QPGK--LAEAFKYFLQGM 306 (326)
T ss_pred cccCCCcCccccccEEEEecCCCchhhhhh-hhhcccCcccceEEEEcccCCccccc--CchH--HHHHHHHHHccC
Confidence 1457999999999988765421 11111223457788888888776654 2444 778888888764
No 109
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.84 E-value=2e-08 Score=103.66 Aligned_cols=97 Identities=20% Similarity=0.273 Sum_probs=73.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC--CCCCCCCCCCC--CC----CCcHHHHHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITSDCF--YN----AGWTEDAREVIGYLHHE 230 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~~~~--~~----~~~~eDl~~~l~~l~~~ 230 (579)
...|+|++-||. |+....+ ..+++.+++.||.|.++|++| .|+.+...... +. .....|+..+++++.+.
T Consensus 69 ~~~PlvvlshG~-Gs~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 69 YLLPLVVLSHGS-GSYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred CcCCeEEecCCC-CCCccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 467999999999 4555555 789999999999999999999 45554322110 11 13347999999999876
Q ss_pred --CC-------CCcEEEEEEchhHHHHHHHHhhcCC
Q 008049 231 --YP-------KAPLFAIGTSIGANILVKYLGEEGE 257 (579)
Q Consensus 231 --~p-------~~~i~lvG~SlGG~ial~ya~~~~~ 257 (579)
.| ..+|.++|||+||..++..++.+.+
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 12 3579999999999999988887654
No 110
>COG0400 Predicted esterase [General function prediction only]
Probab=98.84 E-value=8.3e-08 Score=93.31 Aligned_cols=175 Identities=21% Similarity=0.166 Sum_probs=106.2
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC-------CCCCCCC----CcHHHHHHHHHH
Q 008049 158 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT-------SDCFYNA----GWTEDAREVIGY 226 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-------~~~~~~~----~~~eDl~~~l~~ 226 (579)
++..|+||++||++| ....++ .+...... .+.+ +..||-=.-... ....+.. ..++.+.+.++.
T Consensus 15 ~p~~~~iilLHG~Gg-de~~~~-~~~~~~~P-~~~~--is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 15 DPAAPLLILLHGLGG-DELDLV-PLPELILP-NATL--VSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCCcEEEEEecCCC-Chhhhh-hhhhhcCC-CCeE--EcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 467789999999954 443342 33333333 2333 334442111000 0111110 112345555555
Q ss_pred HHHHCC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhh
Q 008049 227 LHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLH 304 (579)
Q Consensus 227 l~~~~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~ 304 (579)
+.++++ ..+++++|||-||++++..+..++. .++++++.++.......
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~~---------------------------- 139 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEPE---------------------------- 139 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCCc----------------------------
Confidence 556664 4789999999999999999999988 78888877653211000
Q ss_pred ccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcc---hHHH
Q 008049 305 EPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP---WDEC 381 (579)
Q Consensus 305 ~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~~ 381 (579)
..-..-.+|+++++|..||+||....+ ..+.
T Consensus 140 ----------------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~ 173 (207)
T COG0400 140 ----------------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLT 173 (207)
T ss_pred ----------------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHH
Confidence 000122579999999999999987433 3345
Q ss_pred hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 382 RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 382 ~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
...-++....++ +||-.-.| ..+.+.+|+...
T Consensus 174 ~~g~~v~~~~~~-~GH~i~~e--------~~~~~~~wl~~~ 205 (207)
T COG0400 174 ASGADVEVRWHE-GGHEIPPE--------ELEAARSWLANT 205 (207)
T ss_pred HcCCCEEEEEec-CCCcCCHH--------HHHHHHHHHHhc
Confidence 677788888888 89954333 455677777653
No 111
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.82 E-value=1e-07 Score=93.21 Aligned_cols=209 Identities=13% Similarity=0.082 Sum_probs=112.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH----HCCCC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH----EYPKA 234 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~----~~p~~ 234 (579)
..++.++++|=- |++.+.| +.+...+.. -+.++++.++|.|.--... ...|+..+++.|.. -++++
T Consensus 5 ~~~~~L~cfP~A-GGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~ep-------~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPHA-GGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGEP-------LLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecCC-CCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCCc-------ccccHHHHHHHHHHHhccccCCC
Confidence 455678888855 5566666 778776654 5899999999998642221 23445555554443 34577
Q ss_pred cEEEEEEchhHHHHHHHHhhcCCC-CCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccC
Q 008049 235 PLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 313 (579)
Q Consensus 235 ~i~lvG~SlGG~ial~ya~~~~~~-~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d 313 (579)
|+.++||||||+++...|.+.... ....++.+.+...........+.. .-+..+...++.+-..
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~-----~~D~~~l~~l~~lgG~---------- 139 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHH-----LDDADFLADLVDLGGT---------- 139 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccC-----CCHHHHHHHHHHhCCC----------
Confidence 999999999999999888765331 234455444432211111000100 0011111111111000
Q ss_pred hhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCccc--ccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008049 314 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSST--YVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 391 (579)
Q Consensus 314 ~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~--~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 391 (579)
...+.....++++--. .+..-|+...... .-..+.+|+.++.|++|..++.+.+............+.+
T Consensus 140 p~e~led~El~~l~LP---------ilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~ 210 (244)
T COG3208 140 PPELLEDPELMALFLP---------ILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRV 210 (244)
T ss_pred ChHHhcCHHHHHHHHH---------HHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEE
Confidence 0011111111111100 0111111111111 1256899999999999999998866533445566788888
Q ss_pred eCCCCcccccc
Q 008049 392 TWHGGHLAFFE 402 (579)
Q Consensus 392 ~~~GGH~gfle 402 (579)
++ |||+-..+
T Consensus 211 fd-GgHFfl~~ 220 (244)
T COG3208 211 FD-GGHFFLNQ 220 (244)
T ss_pred ec-Ccceehhh
Confidence 87 69976555
No 112
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.82 E-value=6.9e-08 Score=95.16 Aligned_cols=103 Identities=21% Similarity=0.147 Sum_probs=75.3
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 242 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~S 242 (579)
.|+++||.+| +...| ..+++.+...++.|+.++++|.+..... .....+=+...++.|+...|..|+.++|||
T Consensus 2 ~lf~~p~~gG-~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~~-----~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 2 PLFCFPPAGG-SASSY-RPLARALPDDVIGVYGIEYPGRGDDEPP-----PDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp EEEEESSTTC-SGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSHE-----ESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred eEEEEcCCcc-CHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCCC-----CCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 5889999955 55567 7899888765689999999999832111 112223344567788888888899999999
Q ss_pred hhHHHHHHHHhhcCC-CCCccEEEEEcCCcC
Q 008049 243 IGANILVKYLGEEGE-KTPVAGAAAICSPWD 272 (579)
Q Consensus 243 lGG~ial~ya~~~~~-~~~v~a~V~is~p~d 272 (579)
+||.+|...|.+-.+ ...+..+++++++..
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999988765322 226889999996543
No 113
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=1.9e-07 Score=107.43 Aligned_cols=240 Identities=16% Similarity=0.142 Sum_probs=151.3
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHH-HHHhCCCeE
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVF-NTAKRGWNV 193 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~--~~yi~~l~~-~l~~~Gy~V 193 (579)
...+++..+ ||.+..+-...|++..+ ..+-|+++.+||..++.. ..+.-.+.. .+...|+.|
T Consensus 497 ~~~~~~i~~---~~~~~~~~~~lP~~~~~------------~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v 561 (755)
T KOG2100|consen 497 IVEFGKIEI---DGITANAILILPPNFDP------------SKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAV 561 (755)
T ss_pred cceeEEEEe---ccEEEEEEEecCCCCCC------------CCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEE
Confidence 344444444 88777776666755432 246699999999865211 111122333 356789999
Q ss_pred EEEcCCCCCCCCCCCC----CCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEE
Q 008049 194 VVSNHRGLGGVSITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAI 267 (579)
Q Consensus 194 vv~D~RG~G~S~~~~~----~~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~i 267 (579)
+.+|.||-|+....-. +.......+|...+++++.+.. ...++.++|+|.||.++++.++..+.. -++++|++
T Consensus 562 ~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvav 640 (755)
T KOG2100|consen 562 LQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAV 640 (755)
T ss_pred EEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEe
Confidence 9999999887543311 1112235689999998887764 346899999999999999999998741 45666999
Q ss_pred cCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCH-HHHHHh
Q 008049 268 CSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV-DTYYRN 346 (579)
Q Consensus 268 s~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~-~~yy~~ 346 (579)
+|..|..-... .+.. ...|..+. ..-|..
T Consensus 641 aPVtd~~~yds---------~~te-----------------------------------------rymg~p~~~~~~y~e 670 (755)
T KOG2100|consen 641 APVTDWLYYDS---------TYTE-----------------------------------------RYMGLPSENDKGYEE 670 (755)
T ss_pred cceeeeeeecc---------cccH-----------------------------------------hhcCCCccccchhhh
Confidence 88766531100 0000 00011110 111555
Q ss_pred CCcccccCCCcccE-EEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 347 CSSSTYVGNVSIPL-LCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 347 ~s~~~~l~~I~vPv-LiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
.+....+.+++.|. |+|||+.|.-|+.+.... .+....-...+.++|+-.|--..- ....-+...+..|+...
T Consensus 671 ~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~---~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 671 SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV---EVISHLYEKLDRFLRDC 747 (755)
T ss_pred ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc---cchHHHHHHHHHHHHHH
Confidence 66667778887776 999999999998773322 233444448999999999954432 11134667888888865
Q ss_pred cCC
Q 008049 423 HSS 425 (579)
Q Consensus 423 ~~~ 425 (579)
...
T Consensus 748 ~~~ 750 (755)
T KOG2100|consen 748 FGS 750 (755)
T ss_pred cCc
Confidence 554
No 114
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.79 E-value=4.4e-09 Score=109.19 Aligned_cols=129 Identities=16% Similarity=0.153 Sum_probs=74.7
Q ss_pred EEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-----------------HHHHHHHH
Q 008049 124 LFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----------------IRHLVFNT 186 (579)
Q Consensus 124 ~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~y-----------------i~~l~~~l 186 (579)
.|.+.++..+....+.|.+. +...|.||++||-+++ .+.. -..++.+|
T Consensus 92 ~f~~~p~~~vpaylLvPd~~--------------~~p~PAVL~lHgHg~~-Ke~~~g~~gv~~~~~~~~~~~~~~~g~~L 156 (390)
T PF12715_consen 92 EFNTTPGSRVPAYLLVPDGA--------------KGPFPAVLCLHGHGGG-KEKMAGEDGVSPDLKDDYDDPKQDYGDQL 156 (390)
T ss_dssp EE--STTB-EEEEEEEETT----------------S-EEEEEEE--TT---HHHHCT---SSGCG--STTSTTT-HHHHH
T ss_pred EEEccCCeeEEEEEEecCCC--------------CCCCCEEEEeCCCCCC-cccccCCcccccccchhhccccccHHHHH
Confidence 34455677776666666432 2567899999997443 2211 12467889
Q ss_pred HhCCCeEEEEcCCCCCCCCCCCCCC--CC------------CCc------HHHHHHHHHHHHHHC--CCCcEEEEEEchh
Q 008049 187 AKRGWNVVVSNHRGLGGVSITSDCF--YN------------AGW------TEDAREVIGYLHHEY--PKAPLFAIGTSIG 244 (579)
Q Consensus 187 ~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~------------~~~------~eDl~~~l~~l~~~~--p~~~i~lvG~SlG 244 (579)
+++||.|+++|.+|+|......... .+ .++ +.|...+++|+..+- ...+|.++|+|||
T Consensus 157 Ak~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmG 236 (390)
T PF12715_consen 157 AKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMG 236 (390)
T ss_dssp HTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGG
T ss_pred HhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeeccc
Confidence 9999999999999999754322111 01 111 135556889987652 2468999999999
Q ss_pred HHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 245 ANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 245 G~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
|..++.+++..+ +|+++|+.+-.
T Consensus 237 g~~a~~LaALDd---RIka~v~~~~l 259 (390)
T PF12715_consen 237 GYRAWWLAALDD---RIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHH-T---T--EEEEES-B
T ss_pred HHHHHHHHHcch---hhHhHhhhhhh
Confidence 999988777765 59888877644
No 115
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.78 E-value=2.5e-08 Score=103.86 Aligned_cols=109 Identities=19% Similarity=0.201 Sum_probs=83.8
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008049 161 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 234 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~ 234 (579)
.+.++++|-+.. ..|| +.++..+.+.|..|+++++++=..+.. .+.......+++.++++.+++..+..
T Consensus 107 ~~PlLiVpP~iN---k~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 107 KRPLLIVPPWIN---KFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCceEeeccccC---ceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 345778887643 2233 578999999999999999997554432 11122222378889999999988888
Q ss_pred cEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 235 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 235 ~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
+|.++|++.||+++..+++..+.. +|+.++...+++|+..
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~ 221 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSH 221 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhcc
Confidence 999999999999999999888873 5999999999988765
No 116
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.77 E-value=1.8e-07 Score=95.01 Aligned_cols=107 Identities=20% Similarity=0.324 Sum_probs=80.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC---CCeEEEEcCCCCCCCCCCC-----CCCCCCCcHHHHHHHHHHHHH---
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSITS-----DCFYNAGWTEDAREVIGYLHH--- 229 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~-----~~~~~~~~~eDl~~~l~~l~~--- 229 (579)
++.+++++|..| --+.| ..+...|.++ .|.|+++.+.||-.++... .+.| +..+.+...++.+.+
T Consensus 2 ~~li~~IPGNPG-lv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~--sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPG-LVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLF--SLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCC-hHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCcc--CHHHHHHHHHHHHHHHhh
Confidence 468999999976 55556 7888888755 7999999999998765541 1222 334555555555543
Q ss_pred HC--CCCcEEEEEEchhHHHHHHHHhhcC-CCCCccEEEEEcCCc
Q 008049 230 EY--PKAPLFAIGTSIGANILVKYLGEEG-EKTPVAGAAAICSPW 271 (579)
Q Consensus 230 ~~--p~~~i~lvG~SlGG~ial~ya~~~~-~~~~v~a~V~is~p~ 271 (579)
.+ +..+++++|||+|+.++++.+.+.+ ...+|.+++++.|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 33 5678999999999999999999998 334799999998865
No 117
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=1.4e-07 Score=101.82 Aligned_cols=238 Identities=19% Similarity=0.157 Sum_probs=146.9
Q ss_pred CCCCCceE-EEE--EcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCC-----C--ccHHHHHHHH
Q 008049 115 PPCFSYRR-QLF--RLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSD-----S--AASYIRHLVF 184 (579)
Q Consensus 115 ~~~~~y~r-~~l--~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~-----s--~~~yi~~l~~ 184 (579)
.+.+.|.- ++| ..+.|.++..-.+.|.+..|+ .+-|+|+++-|..+- + .-.|++ ..
T Consensus 605 ~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pg------------kkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~ 670 (867)
T KOG2281|consen 605 PPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPG------------KKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FC 670 (867)
T ss_pred CCCCccCChhheeeecCCCcEEEEEEEccccCCCC------------CCCceEEEEcCCCceEEeeccccceehhh--hh
Confidence 34445543 444 665566666667777665543 457999999996431 1 112322 35
Q ss_pred HHHhCCCeEEEEcCCCCCCCCCCCCCC----CCCCcHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHHHHhhcCC
Q 008049 185 NTAKRGWNVVVSNHRGLGGVSITSDCF----YNAGWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGE 257 (579)
Q Consensus 185 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~~~~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ya~~~~~ 257 (579)
.|+..||.|+++|.||...-...-... ...-..+|-.+.++++.++++ -.++.+-|+|+||.+++..+.++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 678899999999999965433321111 111235899999999999874 4689999999999999999999998
Q ss_pred CCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCC
Q 008049 258 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF 337 (579)
Q Consensus 258 ~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~ 337 (579)
-+..+|+- +|...+ ..|+ ..+|.+..|+
T Consensus 751 --IfrvAIAG-apVT~W------------~~YD-------------------------------------TgYTERYMg~ 778 (867)
T KOG2281|consen 751 --IFRVAIAG-APVTDW------------RLYD-------------------------------------TGYTERYMGY 778 (867)
T ss_pred --eeeEEecc-Ccceee------------eeec-------------------------------------ccchhhhcCC
Confidence 44444433 332111 0111 1111112222
Q ss_pred C-CHHHHHHhCCcccccCCC---cccEEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCccc
Q 008049 338 E-TVDTYYRNCSSSTYVGNV---SIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMW 410 (579)
Q Consensus 338 ~-s~~~yy~~~s~~~~l~~I---~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w 410 (579)
. .-++-|...|....+.+. .-.+|++||.=|.-|...+... .+.++++.-++.++|+-.|..=-- .....
T Consensus 779 P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~---es~~~ 855 (867)
T KOG2281|consen 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNP---ESGIY 855 (867)
T ss_pred CccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCC---ccchh
Confidence 2 112223333333333333 4558999999998887664433 356788889999999999964211 12246
Q ss_pred HHHHHHHHHHh
Q 008049 411 WVRAVNEYLGV 421 (579)
Q Consensus 411 ~~~~v~eFL~~ 421 (579)
++..+..|++.
T Consensus 856 yE~rll~FlQ~ 866 (867)
T KOG2281|consen 856 YEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhh
Confidence 78889999875
No 118
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.76 E-value=1.2e-07 Score=92.83 Aligned_cols=103 Identities=19% Similarity=0.173 Sum_probs=80.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC----C--
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----P-- 232 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~----p-- 232 (579)
..-|+|+|+||+. -..+.| ..+..+++.+||-|+++++-..-. ......+++..++++|+.+.. |
T Consensus 44 G~yPVilF~HG~~-l~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 44 GTYPVILFLHGFN-LYNSFY-SQLLAHIASHGFIVVAPQLYTLFP-------PDGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CCccEEEEeechh-hhhHHH-HHHHHHHhhcCeEEEechhhcccC-------CCchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 5679999999994 456566 889999999999999999864321 112345688999999997653 2
Q ss_pred ----CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 233 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 233 ----~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
-.++.++|||.||-.|..+|..+..+.++.++|.+.|.
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35899999999999999988877655578888888654
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.75 E-value=3.3e-07 Score=94.29 Aligned_cols=234 Identities=18% Similarity=0.117 Sum_probs=118.9
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC------CCCcEEEEEEchhHHHHHHH
Q 008049 178 YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------PKAPLFAIGTSIGANILVKY 251 (579)
Q Consensus 178 yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~------p~~~i~lvG~SlGG~ial~y 251 (579)
+-..++..+.++||.|++.||.|.|. +.... .....++.+.++..++.. .+.+++++|||-||..++..
T Consensus 14 ~e~~~l~~~L~~GyaVv~pDY~Glg~-~y~~~----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 14 YEAPFLAAWLARGYAVVAPDYEGLGT-PYLNG----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred hHHHHHHHHHHCCCEEEecCCCCCCC-cccCc----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 33456777889999999999999987 22111 111123333333333222 24689999999999987654
Q ss_pred Hh---hcCCCCC--ccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChh---Hhhc--cC
Q 008049 252 LG---EEGEKTP--VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE---GIKK--SR 321 (579)
Q Consensus 252 a~---~~~~~~~--v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~---~i~~--~~ 321 (579)
+. .+..+.. +.|+++.++|.|+......+.......+....+ .++....+.....+....... .+.. ..
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l-~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~ 167 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYAL-LGLAAAYPELDELLDSYLTPEGRALLDDARTR 167 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHH-HHHHHhCccHHHHHHHHhhHHHHHHHHHHHhh
Confidence 43 3333345 889999999888765433332221111111111 111111000000000000000 0000 00
Q ss_pred CHHHH-Hhhhhccc-CC----CC---------CHHHHHHhCCc-ccccCCCcccEEEEEeCCCCCCCCCCcc---hHHHh
Q 008049 322 SIRDF-DSHATCLV-GK----FE---------TVDTYYRNCSS-STYVGNVSIPLLCISSLDDPVCTVEAIP---WDECR 382 (579)
Q Consensus 322 sl~ef-d~~~t~~~-~g----~~---------s~~~yy~~~s~-~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~~~ 382 (579)
...+. ........ .+ +. .+...++..+. ...-..-++|+++.+|.+|.++|..... ...|.
T Consensus 168 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~ 247 (290)
T PF03583_consen 168 CLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCA 247 (290)
T ss_pred hHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHH
Confidence 00000 00000000 00 01 12233333222 0011233799999999999999987433 34677
Q ss_pred cC-CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 383 AN-KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 383 ~~-~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
.. .++++..++.++|..-.-. ......+||...++
T Consensus 248 ~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 248 AGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFA 283 (290)
T ss_pred cCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHC
Confidence 77 6899999999999875431 12456677776554
No 120
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.75 E-value=3.1e-07 Score=88.10 Aligned_cols=90 Identities=18% Similarity=0.142 Sum_probs=60.9
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCC--eEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
++++||+.++..+.-.+.+.+++.+.|. .+.++|++- ..++..+.+..+.+......+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7899999776666554667777877664 445444431 12344445555555555556999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
||||..|..++.+++- . +|+++|....
T Consensus 67 SlGG~~A~~La~~~~~----~-avLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYGL----P-AVLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhCC----C-EEEEcCCCCH
Confidence 9999999988887754 3 3889887654
No 121
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.71 E-value=6.4e-08 Score=92.82 Aligned_cols=159 Identities=19% Similarity=0.206 Sum_probs=109.2
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC-CCCCCCCCCCCC--------CCCCCcHHHHHHHHHHHHHHCC
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH-RGLGGVSITSDC--------FYNAGWTEDAREVIGYLHHEYP 232 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~-RG~G~S~~~~~~--------~~~~~~~eDl~~~l~~l~~~~p 232 (579)
.+||++--+.|-+... .+..+..++.+||.|+++|+ ||=..++..... ........|+..++++|+.+++
T Consensus 40 ~~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4566666555655543 48899999999999999997 442222221110 1112234799999999998887
Q ss_pred CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcccccccc
Q 008049 233 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 312 (579)
Q Consensus 233 ~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 312 (579)
..+|.++|+.|||.++..+....++ +.++|+.-+.+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps~----------------------------------------- 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPSF----------------------------------------- 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchh---heeeeEecCCc-----------------------------------------
Confidence 8899999999999999888777764 66666542211
Q ss_pred ChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHH--HhcCCCE--E
Q 008049 313 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE--CRANKNV--V 388 (579)
Q Consensus 313 d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~--~~~~~~~--~ 388 (579)
.+ ...+.++++|+|++.|+.|+++|++.+...+ ...++.+ .
T Consensus 155 -------------------------~d----------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 155 -------------------------VD----------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------CC----------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 00 1335678899999999999999998554322 2333332 4
Q ss_pred EEEeCCCCccccc
Q 008049 389 LATTWHGGHLAFF 401 (579)
Q Consensus 389 l~~~~~GGH~gfl 401 (579)
+.++++-|| ||.
T Consensus 200 v~~f~g~~H-Gf~ 211 (242)
T KOG3043|consen 200 VKTFSGVGH-GFV 211 (242)
T ss_pred EEEcCCccc-hhh
Confidence 889999999 555
No 122
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.67 E-value=1.3e-07 Score=94.96 Aligned_cols=111 Identities=21% Similarity=0.365 Sum_probs=70.7
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHH-hCCC--eE--EEEcCCCC----CCCCC--CCCC---CCC--C-----CcHHHHH
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTA-KRGW--NV--VVSNHRGL----GGVSI--TSDC---FYN--A-----GWTEDAR 221 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~-~~Gy--~V--vv~D~RG~----G~S~~--~~~~---~~~--~-----~~~eDl~ 221 (579)
+.||+||+.|+..+ + ..++..+. +.|. .+ +-++--|. |.-.. ..|- .|. . ..+.-+.
T Consensus 13 PTifihG~~gt~~s-~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 13 PTIFIHGYGGTANS-F-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp EEEEE--TTGGCCC-C-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred cEEEECCCCCChhH-H-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 46699999765544 4 78999997 7664 33 33444442 22111 1110 011 1 1235688
Q ss_pred HHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCC---CccEEEEEcCCcChhh
Q 008049 222 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT---PVAGAAAICSPWDLLI 275 (579)
Q Consensus 222 ~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~---~v~a~V~is~p~d~~~ 275 (579)
.++.+|+++|.-.++.+|||||||..++.|+..++.+. .+..+|+|++|++...
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 89999999999999999999999999999999876533 5899999999998753
No 123
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.64 E-value=6.8e-07 Score=90.00 Aligned_cols=249 Identities=14% Similarity=0.167 Sum_probs=119.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHH----HHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLV----FNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 234 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~----~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~ 234 (579)
.++|++|-.|-++-+..+.+ ..+. .....+.|.++=+|.||+..-...-+..|.+-..+++.+.+..+.+.+.-.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk 99 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK 99 (283)
T ss_dssp TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT--
T ss_pred CCCceEEEeccccccchHHH-HHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc
Confidence 46899999998843333312 2221 122235799999999998764434344444434455555555555554555
Q ss_pred cEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHH-HHHHHHHHHhHHHHHhhhccccccccC
Q 008049 235 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ-KIYDRALTIGLQDYAQLHEPRYSRLAN 313 (579)
Q Consensus 235 ~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~d 313 (579)
.++.+|--.||+|+++||..+|+ +|.|+|+|++........++...++.. .++...+...+..+...|.-.-
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~----- 172 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGK----- 172 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-H-----
T ss_pred EEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhccccc-----
Confidence 79999999999999999999999 999999999876554444333332211 1122222333333332221110
Q ss_pred hhHhhc-cCCHHHHHhhhhcccCCCCCH----HHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008049 314 WEGIKK-SRSIRDFDSHATCLVGKFETV----DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 388 (579)
Q Consensus 314 ~~~i~~-~~sl~efd~~~t~~~~g~~s~----~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 388 (579)
+.... ...+..+...+.... .-.++ +.|.++.+.....+...||+|++.|...|..... ..........+..
T Consensus 173 -~~~~~n~Dlv~~yr~~l~~~~-Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v-v~~ns~Ldp~~tt 249 (283)
T PF03096_consen 173 -EEEENNSDLVQTYRQHLDERI-NPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV-VEMNSKLDPTKTT 249 (283)
T ss_dssp -HHHHCT-HHHHHHHHHHHT-T-THHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH-HHHHHHS-CCCEE
T ss_pred -ccccccHHHHHHHHHHHhcCC-CHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH-HHHHhhcCcccce
Confidence 00000 001112222211111 11122 2333333444455677899999999998766432 1111122345678
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 389 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 389 l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
++.++++|=+...|. |.+ +.+++.=|++-+
T Consensus 250 llkv~dcGglV~eEq--P~k--laea~~lFlQG~ 279 (283)
T PF03096_consen 250 LLKVADCGGLVLEEQ--PGK--LAEAFKLFLQGM 279 (283)
T ss_dssp EEEETT-TT-HHHH---HHH--HHHHHHHHHHHT
T ss_pred EEEecccCCcccccC--cHH--HHHHHHHHHccC
Confidence 888999988777773 444 778888787654
No 124
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.64 E-value=4.7e-07 Score=89.63 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=74.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHh--------CCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC-
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAK--------RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY- 231 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~--------~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~- 231 (579)
+..|||+||..|+.. .+ +.+...+.+ ..++++.+|+...... .. .... ....+-+.+.++++.+.+
T Consensus 4 g~pVlFIhG~~Gs~~-q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~~l-~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYK-QV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GRTL-QRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHh-HH-HHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-cccH-HHHHHHHHHHHHHHHHhhh
Confidence 456999999966544 33 566665532 2588999998764211 11 1111 123456777888887777
Q ss_pred ----CCCcEEEEEEchhHHHHHHHHhhcCC-CCCccEEEEEcCCcChhh
Q 008049 232 ----PKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 232 ----p~~~i~lvG~SlGG~ial~ya~~~~~-~~~v~a~V~is~p~d~~~ 275 (579)
+..++++|||||||.++-.++..... ...|..+|.+++|.....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 67899999999999998877765442 236999999999876543
No 125
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.64 E-value=7.4e-08 Score=102.57 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=63.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCC-CCCC-C-CCC-----C-----C-------CCC----
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL-GGVS-I-TSD-----C-----F-------YNA---- 214 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~-G~S~-~-~~~-----~-----~-------~~~---- 214 (579)
..-|+|||-||++| +...| ..++..|+.+||-|+++|||-. +-.. . ... . . +..
T Consensus 98 ~~~PvvIFSHGlgg-~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGG-SRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT---TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCc-chhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 55799999999955 56667 7899999999999999999953 2110 0 000 0 0 000
Q ss_pred -----------CcHHHHHHHHHHHHHHC----------------------CCCcEEEEEEchhHHHHHHHHhhcCCCCCc
Q 008049 215 -----------GWTEDAREVIGYLHHEY----------------------PKAPLFAIGTSIGANILVKYLGEEGEKTPV 261 (579)
Q Consensus 215 -----------~~~eDl~~~l~~l~~~~----------------------p~~~i~lvG~SlGG~ial~ya~~~~~~~~v 261 (579)
-..+|+..+++.|.+.. .-.++.++|||+||..++..+.... ++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~---r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT---RF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T---T-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc---Cc
Confidence 01257777887775411 0236999999999999998887763 69
Q ss_pred cEEEEEcC
Q 008049 262 AGAAAICS 269 (579)
Q Consensus 262 ~a~V~is~ 269 (579)
+++|++.+
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99998864
No 126
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=1.1e-06 Score=81.63 Aligned_cols=176 Identities=14% Similarity=0.174 Sum_probs=100.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
+.+|++||+.|++...|...+-..+.. +-.++.. ....+ ....|++-+.+.+..+ ..++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w~~P--~~~dWi~~l~~~v~a~-----~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DWEAP--VLDDWIARLEKEVNAA-----EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CCCCC--CHHHHHHHHHHHHhcc-----CCCeEEEEe
Confidence 458999999887776664433333321 2222221 11111 1122333333333322 347999999
Q ss_pred chhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccC
Q 008049 242 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 321 (579)
Q Consensus 242 SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 321 (579)
|+|+.++++|+.+... +|.|+.++++|.--... .. ..
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~-----------~~------------------------------~~ 103 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPE-----------IR------------------------------PK 103 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCCccccc-----------cc------------------------------hh
Confidence 9999999999998877 89999999876311000 00 00
Q ss_pred CHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccc
Q 008049 322 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFF 401 (579)
Q Consensus 322 sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfl 401 (579)
....| +. .......-|.+++.++|||+++++.... .+..- ...++.+.++||+---
T Consensus 104 ~~~tf---------~~-------------~p~~~lpfps~vvaSrnDp~~~~~~a~~-~a~~w-gs~lv~~g~~GHiN~~ 159 (181)
T COG3545 104 HLMTF---------DP-------------IPREPLPFPSVVVASRNDPYVSYEHAED-LANAW-GSALVDVGEGGHINAE 159 (181)
T ss_pred hcccc---------CC-------------CccccCCCceeEEEecCCCCCCHHHHHH-HHHhc-cHhheecccccccchh
Confidence 00000 00 1123445799999999999999885543 23333 3567888899998765
Q ss_pred cccccCcccHHHHHHHHHHh
Q 008049 402 EGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 402 eg~~~~~~w~~~~v~eFL~~ 421 (579)
+|..+-+ .....+.+|+.+
T Consensus 160 sG~g~wp-eg~~~l~~~~s~ 178 (181)
T COG3545 160 SGFGPWP-EGYALLAQLLSR 178 (181)
T ss_pred hcCCCcH-HHHHHHHHHhhh
Confidence 5532211 133455555543
No 127
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.52 E-value=3.8e-06 Score=83.69 Aligned_cols=124 Identities=15% Similarity=0.176 Sum_probs=73.1
Q ss_pred CCCcEEEEEeecCCCCCCCCccccccccCCCCCC-cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCC---
Q 008049 128 SDGGMIALDWLMGSTAGPGDVFHANNFISKDDTT-PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG--- 203 (579)
Q Consensus 128 ~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~-PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~--- 203 (579)
+-|..+-+..|.|.+..| +.+- |.|||+||-+-.+...+ ..+ +. |.-.++.+.+-.+-
T Consensus 169 ~tgneLkYrly~Pkdy~p------------dkky~PLvlfLHgagq~g~dn~-~~l---~s--g~gaiawa~pedqcfVl 230 (387)
T COG4099 169 STGNELKYRLYTPKDYAP------------DKKYYPLVLFLHGAGQGGSDND-KVL---SS--GIGAIAWAGPEDQCFVL 230 (387)
T ss_pred ccCceeeEEEecccccCC------------CCccccEEEEEecCCCCCchhh-hhh---hc--CccceeeecccCceEEE
Confidence 447778888887755443 2334 99999999754444433 222 11 23333333333220
Q ss_pred CCCCCCCCCC------CCcHHHHHHHHH-HHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 204 VSITSDCFYN------AGWTEDAREVIG-YLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 204 S~~~~~~~~~------~~~~eDl~~~l~-~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
++--.+ .+. .........+++ -+..+| ...+|+++|.|+||..++.++.++|+ .++|++.||..+|
T Consensus 231 APQy~~-if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d 305 (387)
T COG4099 231 APQYNP-IFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGD 305 (387)
T ss_pred cccccc-cccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCc
Confidence 110000 010 011122333333 444555 35789999999999999999999999 8999999988765
No 128
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.50 E-value=6.1e-07 Score=85.03 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=78.1
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 242 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~S 242 (579)
.+||+-|=+|-. ..-+.++..|+++|+.|+.+|-+-+=-+..+ | .....|+.+++++..++....+++++|+|
T Consensus 4 ~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-P----~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSERT-P----EQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhhCC-H----HHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 577888864433 2347899999999999999998765444333 2 23468999999999999988999999999
Q ss_pred hhHHHHHHHHhhcCCC--CCccEEEEEcCC
Q 008049 243 IGANILVKYLGEEGEK--TPVAGAAAICSP 270 (579)
Q Consensus 243 lGG~ial~ya~~~~~~--~~v~a~V~is~p 270 (579)
+|+-++-....+-|.. .+|..++++++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9998887777666642 368899988764
No 129
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.46 E-value=7.3e-07 Score=84.32 Aligned_cols=187 Identities=14% Similarity=0.112 Sum_probs=114.3
Q ss_pred CCCcEEEEECCC---CCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc
Q 008049 159 DTTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHGl---~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
...|+.||+||. .|+... .-..+.-+.++||+|+.+++-=+... + .-.....|+..-++++.+.+++.+
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~--clsiv~~a~~~gY~vasvgY~l~~q~-----h-tL~qt~~~~~~gv~filk~~~n~k 136 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKM--CLSIVGPAVRRGYRVASVGYNLCPQV-----H-TLEQTMTQFTHGVNFILKYTENTK 136 (270)
T ss_pred CCccEEEEEecchhhcCchhc--ccchhhhhhhcCeEEEEeccCcCccc-----c-cHHHHHHHHHHHHHHHHHhcccce
Confidence 345899999992 122222 13567788899999999976322221 1 111234788889999999998765
Q ss_pred -EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccCh
Q 008049 236 -LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 314 (579)
Q Consensus 236 -i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~ 314 (579)
+.+-|||.|+.++...+.+..+ .+|.|+++.|..+++..-. .
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~---------------------~--------------- 179 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELS---------------------N--------------- 179 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHh---------------------C---------------
Confidence 5667999999999998887544 3788888777665542100 0
Q ss_pred hHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcc-cccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008049 315 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS-TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 393 (579)
Q Consensus 315 ~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~-~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 393 (579)
..+.. | -|..+ +--+.+||. ..+..+++|+|++.|+.|.---.+. .++.........+.+++
T Consensus 180 -----te~g~--d-------lgLt~--~~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQ-nrdf~~q~~~a~~~~f~ 242 (270)
T KOG4627|consen 180 -----TESGN--D-------LGLTE--RNAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQ-NRDFADQLRKASFTLFK 242 (270)
T ss_pred -----Ccccc--c-------cCccc--chhhhcCccHHHhcCceeeeeEeeecccCcHHHHh-hhhHHHHhhhcceeecC
Confidence 00000 0 00000 000122222 4567899999999999884211111 12233344557889999
Q ss_pred CCCccccccccccC
Q 008049 394 HGGHLAFFEGLTAA 407 (579)
Q Consensus 394 ~GGH~gfleg~~~~ 407 (579)
+.+|.-.+|....+
T Consensus 243 n~~hy~I~~~~~~~ 256 (270)
T KOG4627|consen 243 NYDHYDIIEETAID 256 (270)
T ss_pred CcchhhHHHHhccc
Confidence 99999988864433
No 130
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.45 E-value=2.3e-06 Score=84.09 Aligned_cols=109 Identities=16% Similarity=0.187 Sum_probs=73.0
Q ss_pred CCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCCeEEEEcCCCCCCCCCC-----CCCCCCCCcHHHHHHHHHHHHHHC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSIT-----SDCFYNAGWTEDAREVIGYLHHEY 231 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-----~~~~~~~~~~eDl~~~l~~l~~~~ 231 (579)
...|+||++||.++ +.+.+.. .+.....++||.|+.++...-...... .......+....+.++++++..+|
T Consensus 14 ~~~PLVv~LHG~~~-~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQ-SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCCEEEEeCCCCC-CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 35799999999955 4444422 233344557999998885321111000 001111234567888899999888
Q ss_pred C--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 232 P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 232 p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
+ ..+|++.|+|.||+++..++..+|+ .+.++..++..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 5 5689999999999999999999999 77777666643
No 131
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.33 E-value=1.4e-06 Score=94.11 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=77.6
Q ss_pred cHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhc
Q 008049 176 ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 255 (579)
Q Consensus 176 ~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~ 255 (579)
..|+..+++.|.+.||.+ ..|++|+|.+-..+.. .....+++.+.++.+.+.++..+++++||||||.++..++..+
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 356689999999999866 7899999987443211 1234588999999998888888999999999999999999887
Q ss_pred CCC--CCccEEEEEcCCcChhh
Q 008049 256 GEK--TPVAGAAAICSPWDLLI 275 (579)
Q Consensus 256 ~~~--~~v~a~V~is~p~d~~~ 275 (579)
++. ..|+..|++++|+....
T Consensus 184 p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CHhHHhHhccEEEECCCCCCCc
Confidence 752 24899999999987653
No 132
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.30 E-value=4.8e-07 Score=88.78 Aligned_cols=89 Identities=13% Similarity=0.179 Sum_probs=57.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCe---EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
|||+||..++....| ..+++.|.++||. ++++++-...................+++++|+.+++..+. ++-+||
T Consensus 4 VVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred EEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 889999976566666 7899999999998 79999944433211100000112346888899988877666 999999
Q ss_pred EchhHHHHHHHHhh
Q 008049 241 TSIGANILVKYLGE 254 (579)
Q Consensus 241 ~SlGG~ial~ya~~ 254 (579)
|||||.++-+|+.-
T Consensus 82 HS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 82 HSMGGTIARYYIKG 95 (219)
T ss_dssp ETCHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHH
Confidence 99999999888754
No 133
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.27 E-value=8.9e-06 Score=82.38 Aligned_cols=134 Identities=20% Similarity=0.221 Sum_probs=91.1
Q ss_pred CCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 118 FSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 118 ~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
-..+|-.+...||.+|.--+.... |. ........||++-|..|--+ -..+..=++.||.|+.+|
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r---~n---------~~~ngq~LvIC~EGNAGFYE----vG~m~tP~~lgYsvLGwN 275 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGR---PN---------QSGNGQDLVICFEGNAGFYE----VGVMNTPAQLGYSVLGWN 275 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCC---CC---------CCCCCceEEEEecCCccceE----eeeecChHHhCceeeccC
Confidence 356777888888888753333221 10 01234567888888765222 233444456799999999
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 198 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 198 ~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~--~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
++|+++|.+.+ |......-+.+++++..+. ++...|++.|+|.||.-++..|..+|+ |+++|+-++--|+
T Consensus 276 hPGFagSTG~P---~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 276 HPGFAGSTGLP---YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred CCCccccCCCC---CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 99999997653 2223334566677776655 467789999999999999999999998 9888876554333
No 134
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.27 E-value=7.9e-07 Score=87.36 Aligned_cols=154 Identities=19% Similarity=0.112 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHCC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHH
Q 008049 218 EDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTI 295 (579)
Q Consensus 218 eDl~~~l~~l~~~~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~ 295 (579)
|-+.++++||+++-. ..+|.++|.|.||-+|+.++..++. |.++|+++++.-............
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~~~~~~~~~~~~----------- 69 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVVFQGIGFYRDSS----------- 69 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB--SSEEEETTE------------
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeEecchhcccCCC-----------
Confidence 567899999987622 3589999999999999999999985 999999987643322110000000
Q ss_pred hHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCC
Q 008049 296 GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 375 (579)
Q Consensus 296 ~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 375 (579)
. ..+.+. .+....... ..........+....+- ......-.+.+|++|+|+|+|+||.+.|...
T Consensus 70 ---~----~lp~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~a~IpvE~i~~piLli~g~dD~~WpS~~ 133 (213)
T PF08840_consen 70 ---K----PLPYLP--FDISKFSWN------EPGLLRSRYAFELADDK-AVEEARIPVEKIKGPILLISGEDDQIWPSSE 133 (213)
T ss_dssp --------EE------B-GGG-EE-------TTS-EE-TT-B--TTTG-GGCCCB--GGG--SEEEEEEETT-SSS-HHH
T ss_pred ---c----cCCcCC--cChhhceec------CCcceehhhhhhccccc-ccccccccHHHcCCCEEEEEeCCCCccchHH
Confidence 0 000000 000000000 00000000000000000 0111223477899999999999999998764
Q ss_pred cchH----HHh-cCC-CEEEEEeCCCCccccc
Q 008049 376 IPWD----ECR-ANK-NVVLATTWHGGHLAFF 401 (579)
Q Consensus 376 ~~~~----~~~-~~~-~~~l~~~~~GGH~gfl 401 (579)
.... +.+ ..+ +.+++.++++||+...
T Consensus 134 ~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~ 165 (213)
T PF08840_consen 134 MAEQIEERLKAAGFPHNVEHLSYPGAGHLIEP 165 (213)
T ss_dssp HHHHHHHHHHCTT-----EEEEETTB-S---S
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCCCCceecC
Confidence 3321 222 233 5788999999998643
No 135
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.26 E-value=9.3e-06 Score=81.41 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=88.9
Q ss_pred CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHH--HHH-HhCCCeEEEEc-------C
Q 008049 129 DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV--FNT-AKRGWNVVVSN-------H 198 (579)
Q Consensus 129 DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~--~~l-~~~Gy~Vvv~D-------~ 198 (579)
+|....+..+.|+..+ ...|+||++||-.+ +...+ .+.. ..+ .+.||-|+.+| -
T Consensus 43 ~g~~r~y~l~vP~g~~--------------~~apLvv~LHG~~~-sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 43 NGLKRSYRLYVPPGLP--------------SGAPLVVVLHGSGG-SGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred CCCccceEEEcCCCCC--------------CCCCEEEEEecCCC-ChHHh-hcccchhhhhcccCcEEECcCccccccCC
Confidence 5666777777776542 55699999999854 44444 3333 333 45699999994 2
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCC--CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 199 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 199 RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~--~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
-|++.+....++.-..+.+.++.+++..+..+|.- .++++.|.|-||.++.+++.++++ .+.++..|+...
T Consensus 107 ~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 107 NGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 33444433333333445677899999999999864 489999999999999999999998 777777777654
No 136
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.26 E-value=8.6e-06 Score=83.29 Aligned_cols=118 Identities=20% Similarity=0.233 Sum_probs=79.5
Q ss_pred CceEEEEEcCCCcEEE-EEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH-----HHHHHHHHhCCCe
Q 008049 119 SYRRQLFRLSDGGMIA-LDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI-----RHLVFNTAKRGWN 192 (579)
Q Consensus 119 ~y~r~~l~~~DGg~ia-ldw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi-----~~l~~~l~~~Gy~ 192 (579)
+++|..+.. |+..|. +..-.+ + ......||++-|.++.-+..++ ..+...+...|-+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~-~---------------a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aN 173 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQP-E---------------AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGAN 173 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCC-C---------------CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCc
Confidence 557777777 776652 222111 1 1334578899997543333222 2344445556899
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--C-CCcEEEEEEchhHHHHHHHHhhcC
Q 008049 193 VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--P-KAPLFAIGTSIGANILVKYLGEEG 256 (579)
Q Consensus 193 Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~--p-~~~i~lvG~SlGG~ial~ya~~~~ 256 (579)
|+++||||.|.|.+... ......|..++++|++++. + ...|++.|||+||.++...+..+.
T Consensus 174 vl~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 174 VLVFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred EEEECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 99999999999976542 3567789999999998643 2 357999999999999987666553
No 137
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.25 E-value=6.2e-07 Score=93.70 Aligned_cols=108 Identities=18% Similarity=0.258 Sum_probs=67.4
Q ss_pred CCCCcEEEEECCCCCCC-ccHHHHHHHHHHHhC---CCeEEEEcCCCCCCCCCCCCCCCCC--CcH----HHHHHHHHHH
Q 008049 158 DDTTPIAIVIPGLTSDS-AASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSITSDCFYNA--GWT----EDAREVIGYL 227 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s-~~~yi~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~~~~~~~--~~~----eDl~~~l~~l 227 (579)
+..+|++|++|||.++. ...|+..+...+.++ +++|+++|+...... .|.. ..+ ..+..++..|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFL 141 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHH
Confidence 46789999999998877 567778888876654 799999999643321 1211 111 3556666666
Q ss_pred HHH--CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 228 HHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 228 ~~~--~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
... .+.+++.+|||||||.++-..........+|..+..+.|..
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 633 35678999999999999985554443334788899888754
No 138
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.20 E-value=1.2e-05 Score=80.16 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=76.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCC--eEEEEcCCCCCCCCC-CCCCCCCCCcHHHHHHHHHHHHHHCCCCc
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSI-TSDCFYNAGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~-~~~~~~~~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
+.+.++||+||+. .+-+.-+...++.....|+ .++++.+|+.|.... ..++........++.++++.+....+..+
T Consensus 16 ~~~~vlvfVHGyn-~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYN-NSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCC-CCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 5678999999994 4444334566655555555 799999998876311 11111011123678888888877767789
Q ss_pred EEEEEEchhHHHHHHHHhhcCCC-------CCccEEEEEcCCcCh
Q 008049 236 LFAIGTSIGANILVKYLGEEGEK-------TPVAGAAAICSPWDL 273 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~-------~~v~a~V~is~p~d~ 273 (579)
|.+++||||+.+++..+...... ..+..+++.+|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999998776542211 257788888876655
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.20 E-value=1.5e-05 Score=80.02 Aligned_cols=106 Identities=18% Similarity=0.262 Sum_probs=71.6
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCC------CCC-CC---------CCCCCCc-----
Q 008049 158 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV------SIT-SD---------CFYNAGW----- 216 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S------~~~-~~---------~~~~~~~----- 216 (579)
+++-|+|||-||+ |++...| ..++-.++.+||-|.++.+|-+.-+ +.. .+ +....+.
T Consensus 115 ~~k~PvvvFSHGL-ggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGL-GGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccc-ccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 4677999999999 5677778 8899999999999999999976532 110 00 0000000
Q ss_pred --------HHHHHHHHHHHHHHC-----------------------CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEE
Q 008049 217 --------TEDAREVIGYLHHEY-----------------------PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 265 (579)
Q Consensus 217 --------~eDl~~~l~~l~~~~-----------------------p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V 265 (579)
.++...+++-|.+-. ..+++.++|||+||..++...+.+.+ +.++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeee
Confidence 134444444443311 12468999999999999877777654 88888
Q ss_pred EEc
Q 008049 266 AIC 268 (579)
Q Consensus 266 ~is 268 (579)
+..
T Consensus 270 ~lD 272 (399)
T KOG3847|consen 270 ALD 272 (399)
T ss_pred eee
Confidence 764
No 140
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=7.4e-06 Score=89.20 Aligned_cols=141 Identities=18% Similarity=0.165 Sum_probs=96.9
Q ss_pred ceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 120 YRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 120 y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
-+|..+...||..+-+-.+...+. ..+..+|.+|..+|.-|-+-..+++.--..|.+.|+..+..|.|
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~------------k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDI------------KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred EEEEEEecCCCCccceEEEEechh------------hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 356777788888887776654322 22357899998888666555444343333456789999999999
Q ss_pred CCCCCCCCC---CCCCC-CCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 200 GLGGVSITS---DCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 200 G~G~S~~~~---~~~~~-~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
|=|.-.... .+... ....+|+.+.+++|.+.. ...++.+.|.|.||.++....-.+|+ .+.++|+-.+..|+
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDv 586 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDV 586 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceeh
Confidence 977643221 11111 234589999999998763 24589999999999999988888888 56666655555554
Q ss_pred h
Q 008049 274 L 274 (579)
Q Consensus 274 ~ 274 (579)
.
T Consensus 587 L 587 (712)
T KOG2237|consen 587 L 587 (712)
T ss_pred h
Confidence 3
No 141
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.14 E-value=7.8e-06 Score=80.22 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=48.0
Q ss_pred CCcEEEEECCCCCCCccHHH---HHHHHHHHhCCCeEEEEcCCC-C----CCCCC---------CCC---CCCCCC----
Q 008049 160 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRG-L----GGVSI---------TSD---CFYNAG---- 215 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi---~~l~~~l~~~Gy~Vvv~D~RG-~----G~S~~---------~~~---~~~~~~---- 215 (579)
.++-||++||+ |++.+.+- ..+...|.+.++..+.+|-+= . |-... ... ..+...
T Consensus 3 ~k~riLcLHG~-~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--T-T--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCC-CcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 45779999999 55655431 234444544489999998653 1 11110 000 111111
Q ss_pred cHHHHHHHHH----HHHHHCCCCcEEEEEEchhHHHHHHHHhhcC------CCCCccEEEEEcCC
Q 008049 216 WTEDAREVIG----YLHHEYPKAPLFAIGTSIGANILVKYLGEEG------EKTPVAGAAAICSP 270 (579)
Q Consensus 216 ~~eDl~~~l~----~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~------~~~~v~a~V~is~p 270 (579)
...++.+.++ ++.+..| =..++|||.||.+|..++.... ...+++.+|++|+.
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred cccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 1233444444 4444433 2579999999999988875421 12357888888764
No 142
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.11 E-value=1e-05 Score=87.26 Aligned_cols=168 Identities=18% Similarity=0.251 Sum_probs=108.8
Q ss_pred CCCcEEEEECCCC-CCCccHHHHHHHHHHHhCC--CeEEEEcCCC-CCCCCCCCCCCCCCCcHHHHHHHH----HHHHHH
Q 008049 159 DTTPIAIVIPGLT-SDSAASYIRHLVFNTAKRG--WNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREVI----GYLHHE 230 (579)
Q Consensus 159 ~~~PiVlllHGl~-G~s~~~yi~~l~~~l~~~G--y~Vvv~D~RG-~G~S~~~~~~~~~~~~~eDl~~~l----~~l~~~ 230 (579)
...|++++.||.. -.+.+.++..+-..+...| ..+..+|++- +|+-... ...+-+..+. ..+..+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~-------h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIK-------HAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchH-------HHHHHHHHHhhhhhhhhhcc
Confidence 3468999999975 2233333355666665555 4667778774 5542111 0112222222 334456
Q ss_pred CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008049 231 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 310 (579)
Q Consensus 231 ~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 310 (579)
||..+|+++|.|||+.+++.....+.+. .|+++|+++-|.+.....
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgp--------------------------------- 292 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGP--------------------------------- 292 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCcc---------------------------------
Confidence 8899999999999988888776655542 388888887665432110
Q ss_pred ccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008049 311 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 390 (579)
Q Consensus 311 ~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 390 (579)
.|.+ .+.+-.++.|+|||.|.+|..++++.++....+.-...+++
T Consensus 293 ------------------------rgir-----------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elh 337 (784)
T KOG3253|consen 293 ------------------------RGIR-----------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELH 337 (784)
T ss_pred ------------------------cCCc-----------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEE
Confidence 0111 13455678999999999999999987766555556677899
Q ss_pred EeCCCCcccccc
Q 008049 391 TTWHGGHLAFFE 402 (579)
Q Consensus 391 ~~~~GGH~gfle 402 (579)
++.+++|-.-.-
T Consensus 338 VI~~adhsmaip 349 (784)
T KOG3253|consen 338 VIGGADHSMAIP 349 (784)
T ss_pred EecCCCccccCC
Confidence 999999976553
No 143
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.07 E-value=9.7e-05 Score=73.75 Aligned_cols=219 Identities=16% Similarity=0.144 Sum_probs=119.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCC--CcEEEEEE
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGT 241 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~--~~i~lvG~ 241 (579)
+|++=||.|... ..+...++...+.|++++++-.+-..-.... .....-+..+++.+.+.... .++++-.+
T Consensus 2 lvvl~gW~gA~~-~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKP-KHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCH-HHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 556778876444 4456666667779999999865432111000 12223344455555543322 28999999
Q ss_pred chhHHHHHHHHhh----c---CCCC-CccEEEEEcCCcChhh--hhHHHhhhHHHH----HH-HHHHHHhHHHHHhhhcc
Q 008049 242 SIGANILVKYLGE----E---GEKT-PVAGAAAICSPWDLLI--GDRFIGRRLIQK----IY-DRALTIGLQDYAQLHEP 306 (579)
Q Consensus 242 SlGG~ial~ya~~----~---~~~~-~v~a~V~is~p~d~~~--~~~~l~~~~~~~----~~-~~~l~~~l~~~~~~~~~ 306 (579)
|.||...+..+.+ . +... ++.|.|.-|+|..... ....+....... ++ ...+...+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 148 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRL------ 148 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHH------
Confidence 9988877655441 1 1111 3899999888854322 111111000000 00 00000000000
Q ss_pred ccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchH---HHhc
Q 008049 307 RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRA 383 (579)
Q Consensus 307 ~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~ 383 (579)
.+ ......+......+++...........++|-|+|.++.|++++.+.++.. ..+.
T Consensus 149 ------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~ 207 (240)
T PF05705_consen 149 ------------------SI---ISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRK 207 (240)
T ss_pred ------------------HH---HHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHc
Confidence 00 00011223333444433322233345579999999999999999865532 2344
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008049 384 NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 419 (579)
Q Consensus 384 ~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL 419 (579)
.-.+.....++++|++++. .++..+.+.+.+|+
T Consensus 208 G~~V~~~~f~~S~HV~H~r---~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 208 GWDVRAEKFEDSPHVAHLR---KHPDRYWRAVDEFW 240 (240)
T ss_pred CCeEEEecCCCCchhhhcc---cCHHHHHHHHHhhC
Confidence 5568888999999999997 34445777887773
No 144
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.06 E-value=0.00011 Score=78.97 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=68.0
Q ss_pred CCCcEEEEEC------CCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHH----HHHHHHHH
Q 008049 159 DTTPIAIVIP------GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDA----REVIGYLH 228 (579)
Q Consensus 159 ~~~PiVlllH------Gl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl----~~~l~~l~ 228 (579)
.++|.||+=+ |++|-... +-+-.+.+.|.-|+.+.+.- .+.+ ....+|+ .++++.+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~p-----~P~p----gQTl~DV~~ae~~Fv~~V~ 133 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFFP-----EPEP----GQTLEDVMRAEAAFVEEVA 133 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEecC-----CCCC----CCcHHHHHHHHHHHHHHHH
Confidence 5667777654 55443332 23344455699888886641 1111 1223554 44566677
Q ss_pred HHCCCC-cEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 229 HEYPKA-PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 229 ~~~p~~-~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
...|.. +.+++|-.-||..++.+++..|+ .+.-+|+-++|.+...
T Consensus 134 ~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 134 ERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred HhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCccccc
Confidence 778765 89999999999999999999999 6777777777876654
No 145
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.02 E-value=0.00024 Score=87.75 Aligned_cols=98 Identities=16% Similarity=0.159 Sum_probs=68.0
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHH-HHHHHHHHCCCCcEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE-VIGYLHHEYPKAPLFAI 239 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~-~l~~l~~~~p~~~i~lv 239 (579)
.|.++++||++|+ ...| ..++..+. .+++|+.++.+|+|.... ..+ ..+++.+ +++.+....+..++.++
T Consensus 1068 ~~~l~~lh~~~g~-~~~~-~~l~~~l~-~~~~v~~~~~~g~~~~~~---~~~---~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGF-AWQF-SVLSRYLD-PQWSIYGIQSPRPDGPMQ---TAT---SLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCc-hHHH-HHHHHhcC-CCCcEEEEECCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 4668999999654 4445 67777775 479999999999986521 111 2233332 23334444456689999
Q ss_pred EEchhHHHHHHHHhhc---CCCCCccEEEEEcC
Q 008049 240 GTSIGANILVKYLGEE---GEKTPVAGAAAICS 269 (579)
Q Consensus 240 G~SlGG~ial~ya~~~---~~~~~v~a~V~is~ 269 (579)
||||||.++..++.+. ++ .+..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecC
Confidence 9999999999998753 44 6888888765
No 146
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.99 E-value=9.2e-05 Score=81.44 Aligned_cols=241 Identities=19% Similarity=0.179 Sum_probs=145.5
Q ss_pred eEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC
Q 008049 121 RRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 121 ~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 200 (579)
+|...+..||..|-...+...+. ..+...|++|..-|--|.+....+....-.|.++||.-...--||
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~------------~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRG 487 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDT------------KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRG 487 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEeccc------------CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeec
Confidence 44555668999887777665441 124678999999997777766665666667889999888888898
Q ss_pred CCCCCCC---CCCCCC-CCcHHHHHHHHHHHHHHC-C-CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh
Q 008049 201 LGGVSIT---SDCFYN-AGWTEDAREVIGYLHHEY-P-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 201 ~G~S~~~---~~~~~~-~~~~eDl~~~l~~l~~~~-p-~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
=|.-... ..+..+ ..-.+|+.++.++|.+.. . ...++++|-|.||+++...+.+.|+ .+.++|+-.|-.|..
T Consensus 488 GgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvl 565 (682)
T COG1770 488 GGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVL 565 (682)
T ss_pred ccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchh
Confidence 6653211 111111 122489999999998763 2 3479999999999999999999998 777777766655543
Q ss_pred hhhHHHhhhHHHHHHHHHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccC
Q 008049 275 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 354 (579)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~ 354 (579)
... +. +.+ .-+..|+++.-. +. -+..-+|....|+...+.
T Consensus 566 tTM---------------lD-----------~sl-----------PLT~~E~~EWGN-P~--d~e~y~yikSYSPYdNV~ 605 (682)
T COG1770 566 TTM---------------LD-----------PSL-----------PLTVTEWDEWGN-PL--DPEYYDYIKSYSPYDNVE 605 (682)
T ss_pred hhh---------------cC-----------CCC-----------CCCccchhhhCC-cC--CHHHHHHHhhcCchhccc
Confidence 210 00 000 112222222100 00 112334555566665554
Q ss_pred CC-cccEEEEEeCCCCCCCCCC-cchH--H--HhcCCCEEEEEe-CCCCccccccccccCcccHHHHHHHHH
Q 008049 355 NV-SIPLLCISSLDDPVCTVEA-IPWD--E--CRANKNVVLATT-WHGGHLAFFEGLTAAGMWWVRAVNEYL 419 (579)
Q Consensus 355 ~I-~vPvLiI~g~dDpivp~~~-~~~~--~--~~~~~~~~l~~~-~~GGH~gfleg~~~~~~w~~~~v~eFL 419 (579)
.- --|+|++.|.+|+-|..-. ..+. + .....+..+..+ -.+||-|.-.. ...+.+...||.
T Consensus 606 a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgR----f~~lee~A~eYa 673 (682)
T COG1770 606 AQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGR----FQRLEEIAFEYA 673 (682)
T ss_pred cCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCc----hHHHHHHHHHHH
Confidence 43 3568899999999998642 2221 1 122233344444 57899775431 223555555553
No 147
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.97 E-value=0.00022 Score=68.87 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=49.0
Q ss_pred cCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 353 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 353 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
...|++|.|-|.|+.|.++|...... +....++. .++.-.|||+. |+..-+.+.+.+|+..+...
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~-L~~~~~~a-~vl~HpggH~V------P~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQ-LAESFKDA-TVLEHPGGHIV------PNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHH-HHHhcCCC-eEEecCCCccC------CCchHHHHHHHHHHHHHHHh
Confidence 45789999999999999999886544 55666666 45555689976 44445889999999987654
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.94 E-value=2.5e-05 Score=78.14 Aligned_cols=113 Identities=14% Similarity=0.086 Sum_probs=69.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCC----CeEEEEcCCCCCCC--CCCC-----CCCCCCCcH----HHH-HH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGV--SITS-----DCFYNAGWT----EDA-RE 222 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~G----y~Vvv~D~RG~G~S--~~~~-----~~~~~~~~~----eDl-~~ 222 (579)
..-|+|+++||..+.....-+...+..+.+.| ..+|+++.-+.+.. .... ......+.. +.+ .+
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 56799999999722111111233444444443 45666666554411 1110 011111111 222 36
Q ss_pred HHHHHHHHCCCC--cEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 223 VIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 223 ~l~~l~~~~p~~--~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
++.+|.++|+.. +.+++|+||||..++.++.++|+ .+.+++++|+.++.
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESET
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCccccc
Confidence 778888888622 27999999999999999999999 89999999976554
No 149
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.91 E-value=7.5e-05 Score=75.01 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=76.9
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
|++.++||..| +...| ..++..+... ..|+.++.||.|..... ....-+-+.+.++.|++..|..|+.++|+
T Consensus 1 ~pLF~fhp~~G-~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~-----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAGG-SVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP-----FASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCCC-cHHHH-HHHHHHhccC-ceeeccccCcccccccc-----cCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 45899999854 55555 7788888775 89999999999853211 11223445667888999999999999999
Q ss_pred chhHHHHHHHHhhcCC-CCCccEEEEEcCCcC
Q 008049 242 SIGANILVKYLGEEGE-KTPVAGAAAICSPWD 272 (579)
Q Consensus 242 SlGG~ial~ya~~~~~-~~~v~a~V~is~p~d 272 (579)
|+||++|...|.+-.. ...|.-++++.++..
T Consensus 73 S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999988765321 126888999988766
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.90 E-value=6.1e-05 Score=73.84 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=75.5
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCC-----CeEEEEcCCCCCCCCCC------CC---------CCCCCCcHHHHHHH
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRG-----WNVVVSNHRGLGGVSIT------SD---------CFYNAGWTEDAREV 223 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~G-----y~Vvv~D~RG~G~S~~~------~~---------~~~~~~~~eDl~~~ 223 (579)
.||+||..|+..+ +..++.++...+ -=++.+|--|.=...+. .| +.....+..-+..+
T Consensus 48 TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 48 TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 5699999664443 478888887654 23556666662111110 11 01111234568889
Q ss_pred HHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCC---CCccEEEEEcCCcC
Q 008049 224 IGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWD 272 (579)
Q Consensus 224 l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~---~~v~a~V~is~p~d 272 (579)
+.+|.++|.-.++.+|||||||.-+..|+..++.+ .++...|.++.|++
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999999988999999999999999999988764 26899999999987
No 151
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.87 E-value=4.5e-05 Score=84.37 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=78.9
Q ss_pred CcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHhC--CCeEEEEcCC-C-CC
Q 008049 130 GGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAKR--GWNVVVSNHR-G-LG 202 (579)
Q Consensus 130 Gg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~---G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~R-G-~G 202 (579)
...+.++.+.|.... .....|+||++||.+ |+... + ....++.. |+.|+.+|+| | .|
T Consensus 76 Edcl~l~i~~p~~~~------------~~~~~pv~v~ihGG~~~~g~~~~-~---~~~~~~~~~~~~~vv~~~yRlg~~g 139 (493)
T cd00312 76 EDCLYLNVYTPKNTK------------PGNSLPVMVWIHGGGFMFGSGSL-Y---PGDGLAREGDNVIVVSINYRLGVLG 139 (493)
T ss_pred CcCCeEEEEeCCCCC------------CCCCCCEEEEEcCCccccCCCCC-C---ChHHHHhcCCCEEEEEecccccccc
Confidence 445677777764321 125679999999931 22222 1 12334433 3999999999 5 33
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHH---C--CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 203 GVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 203 ~S~~~~~~~~~~~~~eDl~~~l~~l~~~---~--p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
.-...........-..|...+++|+++. + ...+|.++|+|.||.++..++........+.++|+.|++..
T Consensus 140 ~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 140 FLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred cccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 2211111111112257999999999875 2 24589999999999999877765333235888888886543
No 152
>PRK04940 hypothetical protein; Provisional
Probab=97.86 E-value=0.00063 Score=64.46 Aligned_cols=35 Identities=9% Similarity=-0.118 Sum_probs=29.8
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
.++.+||.||||.-|..++.+++- .+|+|+|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCCh
Confidence 479999999999999999998875 67889887654
No 153
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.77 E-value=0.00032 Score=67.44 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=80.6
Q ss_pred CcEEEEECCCCCCC-ccHHHHHHHHHHHhCCCeEEEEcCC----CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc
Q 008049 161 TPIAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 161 ~PiVlllHGl~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
+-.|||+-|++.+- ...|...++.++-+.+|..+-+-.| |+|.+... ...+|+..+++||...--...
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk-------~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK-------DDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc-------ccHHHHHHHHHHhhccCcccc
Confidence 35688999985432 3468889999999999999998776 45544333 457999999999976544558
Q ss_pred EEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh
Q 008049 236 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
++++|||-|..=.+.|+...-....|.++|+.+|..|..
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999999999995433333588888887776654
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.76 E-value=6.2e-05 Score=74.14 Aligned_cols=40 Identities=23% Similarity=0.168 Sum_probs=26.0
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCC----C------CccEEEEEcCCcCh
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEK----T------PVAGAAAICSPWDL 273 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~----~------~v~a~V~is~p~d~ 273 (579)
.+|.+|||||||.++-.++....+. . .....+.+++|.-.
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G 127 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLG 127 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCC
Confidence 5899999999999986554432211 0 23455667777644
No 155
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.68 E-value=0.00022 Score=73.59 Aligned_cols=114 Identities=12% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCC--eEEEEcCCCCCCCCC-CCCCCCCCCcHHHHHHHHHHHHHHCCCCc
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSI-TSDCFYNAGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~-~~~~~~~~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
..+.+++|+||+. .+-+.-...+++...+.|+ .++++-++.-|..-. ..++..+.....+++.++.+|..+.+..+
T Consensus 114 ~~k~vlvFvHGfN-ntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFN-NTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccC-CchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 5677999999994 4444334577777777774 788899998776321 11222222234789999999999888889
Q ss_pred EEEEEEchhHHHHHHHHhhc---CC---CCCccEEEEEcCCcCh
Q 008049 236 LFAIGTSIGANILVKYLGEE---GE---KTPVAGAAAICSPWDL 273 (579)
Q Consensus 236 i~lvG~SlGG~ial~ya~~~---~~---~~~v~a~V~is~p~d~ 273 (579)
|++++||||..+++..+.+- +. ...|.-+|+-+|-.|.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999998776542 11 1245566666555544
No 156
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.64 E-value=0.00027 Score=76.97 Aligned_cols=111 Identities=23% Similarity=0.271 Sum_probs=71.4
Q ss_pred CCcEEEEECCCCCCCccHHH-HHHHHHHH-hCCCeEEEEcCCCCCCCCCCCCCCCC-------CCcHHHHHHHHHHHHHH
Q 008049 160 TTPIAIVIPGLTSDSAASYI-RHLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYN-------AGWTEDAREVIGYLHHE 230 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi-~~l~~~l~-~~Gy~Vvv~D~RG~G~S~~~~~~~~~-------~~~~eDl~~~l~~l~~~ 230 (579)
..|++|++-|= |.-...++ ..++..++ +.|=.++++.||-+|.|.+....... ....+|+..++++++.+
T Consensus 28 ~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 37888777664 33332232 22334444 45789999999999999754331111 12347999999999977
Q ss_pred C---CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 231 Y---PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 231 ~---p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
+ ++.|++++|-|+||+++..+-.++|+ .+.|+++-|+|...
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeee
Confidence 6 46799999999999999999999999 89999999988744
No 157
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.61 E-value=0.00024 Score=73.09 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=78.0
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhC---C------CeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKR---G------WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK 233 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~---G------y~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~ 233 (579)
.++++|||.|+-.+.| .++..|.+. | |.|+++-++|+|-|+.++..-++. ..++.++..+.-+.+-
T Consensus 154 PlLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~---~a~ArvmrkLMlRLg~ 228 (469)
T KOG2565|consen 154 PLLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNA---AATARVMRKLMLRLGY 228 (469)
T ss_pred ceEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccH---HHHHHHHHHHHHHhCc
Confidence 4789999999878766 677777653 3 899999999999999887765553 4567788888888888
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCCCCccEE
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEKTPVAGA 264 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~ 264 (579)
.+.++-|--+|+.|+..++.-+|+ +|.|.
T Consensus 229 nkffiqGgDwGSiI~snlasLyPe--nV~Gl 257 (469)
T KOG2565|consen 229 NKFFIQGGDWGSIIGSNLASLYPE--NVLGL 257 (469)
T ss_pred ceeEeecCchHHHHHHHHHhhcch--hhhHh
Confidence 899999999999999999999999 56553
No 158
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.60 E-value=0.0011 Score=72.82 Aligned_cols=112 Identities=16% Similarity=0.110 Sum_probs=71.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH-----------HHH------hCCCeEEEEcC-CCCCCCCCCCCCCC--CCCcHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVF-----------NTA------KRGWNVVVSNH-RGLGGVSITSDCFY--NAGWTE 218 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~-----------~l~------~~Gy~Vvv~D~-RG~G~S~~~~~~~~--~~~~~e 218 (579)
.+.|+||+++|..|+|... -.+.+ .+. .+-..++.+|. +|+|.|-....... .....+
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~--G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~ 152 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMF--ALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSE 152 (462)
T ss_pred CCCCEEEEECCCCcHHHHH--hhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHH
Confidence 5679999999998877531 11110 010 01257888896 58888865432211 123457
Q ss_pred HHHHHHHHHHHHCCC---CcEEEEEEchhHHHHHHHHhhcC--------CCCCccEEEEEcCCcC
Q 008049 219 DAREVIGYLHHEYPK---APLFAIGTSIGANILVKYLGEEG--------EKTPVAGAAAICSPWD 272 (579)
Q Consensus 219 Dl~~~l~~l~~~~p~---~~i~lvG~SlGG~ial~ya~~~~--------~~~~v~a~V~is~p~d 272 (579)
|+.++++...+++|. .+++++|+|+||..+..++.+.- ....++|+++..+-.+
T Consensus 153 d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 153 DMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 888888888777764 79999999999998877665421 1124677666554333
No 159
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.54 E-value=0.00098 Score=71.96 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=67.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCC----eEEEEcCCCCCCCCCCCCCCCC-CCcHHHH-HHHHHHHHHHCC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW----NVVVSNHRGLGGVSITSDCFYN-AGWTEDA-REVIGYLHHEYP 232 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy----~Vvv~D~RG~G~S~~~~~~~~~-~~~~eDl-~~~l~~l~~~~p 232 (579)
...|+|+++||-.- .....+...+..+.+.|. .+|.+|..+.. . ......+ ..+.+.+ .+++-+|.++|+
T Consensus 207 ~~~PvlyllDG~~w-~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~-R~~el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 207 EERPLAILLDGQFW-AESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--H-RSQELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCCEEEEEECHHh-hhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--c-ccccCCchHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999521 122123455667777773 35666653211 0 1011111 1122222 456677777765
Q ss_pred ----CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 233 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 233 ----~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
..+.+++|+||||..++..+..+|+ .+.+++++|+.
T Consensus 283 ~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs 322 (411)
T PRK10439 283 FSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGS 322 (411)
T ss_pred CCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccc
Confidence 2468999999999999999999999 89999999865
No 160
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.53 E-value=0.001 Score=65.51 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=46.5
Q ss_pred EEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008049 360 LLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 423 (579)
Q Consensus 360 vLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~ 423 (579)
+.++.|.+|..+|....+. +.+.-|++++...+ |||+.-+- -....+-++|.|-|+++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~-lQ~~WPg~eVr~~e-gGHVsayl---~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS-LQEIWPGCEVRYLE-GGHVSAYL---FKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHH-HHHhCCCCEEEEee-cCceeeee---hhchHHHHHHHHHHHhhh
Confidence 6778999999999976654 67788999999998 89987554 123358899999998764
No 161
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.47 E-value=0.0031 Score=65.56 Aligned_cols=113 Identities=14% Similarity=0.195 Sum_probs=74.5
Q ss_pred CCCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCCeEEEEcCCC--CCCCCCC-----------CCCCCC-----------
Q 008049 159 DTTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHRG--LGGVSIT-----------SDCFYN----------- 213 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~-----------~~~~~~----------- 213 (579)
.....||++||.+.+... ..+..+-..|.++||.++.+..+. ....+.. ......
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 556789999999544332 456777888999999999999887 1111100 000000
Q ss_pred ---------CCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 214 ---------AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 214 ---------~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
.....-+.++++++.+ ++..+++++||+.|+..+++|+.+.+.. .++++|+|++.+..
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYWPQ 231 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCCCc
Confidence 0011234444454443 4555699999999999999999998752 48899999876543
No 162
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.44 E-value=0.001 Score=63.81 Aligned_cols=178 Identities=12% Similarity=0.057 Sum_probs=99.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCC-----CCCCCC----CCCCCCC--cHHHHHHHHHHHHHH
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG-----GVSITS----DCFYNAG--WTEDAREVIGYLHHE 230 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G-----~S~~~~----~~~~~~~--~~eDl~~~l~~l~~~ 230 (579)
-+||++||+ |++...+ ..+++.+.-....-+++.-+-.- +-.... ......+ ..+++..+.+++...
T Consensus 4 atIi~LHgl-GDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGL-GDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecC-CCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 469999999 6777666 45556565556666766443211 111100 0000011 122333333333221
Q ss_pred --------CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHh
Q 008049 231 --------YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQ 302 (579)
Q Consensus 231 --------~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~ 302 (579)
-+..+|++-|+|+||.+++..+-.++. .+.+.+..++-....
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--~l~G~~~~s~~~p~~---------------------------- 131 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK--ALGGIFALSGFLPRA---------------------------- 131 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhcccc--ccceeeccccccccc----------------------------
Confidence 135679999999999999987777654 455555443211000
Q ss_pred hhccccccccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcc---hH
Q 008049 303 LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP---WD 379 (579)
Q Consensus 303 ~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~ 379 (579)
... ..++... . + .+|++.-||++|++||..--. ..
T Consensus 132 --------------------~~~--------~~~~~~~------------~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~ 169 (206)
T KOG2112|consen 132 --------------------SIG--------LPGWLPG------------V-N-YTPILLCHGTADPLVPFRFGEKSAQF 169 (206)
T ss_pred --------------------hhh--------ccCCccc------------c-C-cchhheecccCCceeehHHHHHHHHH
Confidence 000 0010000 0 0 689999999999999987222 12
Q ss_pred HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 380 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 380 ~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
+......+++..+++-+|--.-+ -.+.+..|+++
T Consensus 170 l~~~~~~~~f~~y~g~~h~~~~~--------e~~~~~~~~~~ 203 (206)
T KOG2112|consen 170 LKSLGVRVTFKPYPGLGHSTSPQ--------ELDDLKSWIKT 203 (206)
T ss_pred HHHcCCceeeeecCCccccccHH--------HHHHHHHHHHH
Confidence 33333448899999999965544 23567777766
No 163
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.41 E-value=0.00066 Score=72.91 Aligned_cols=113 Identities=19% Similarity=0.157 Sum_probs=74.5
Q ss_pred CCCcEEEEECCC--CCCCccHHHHHHHHHHHhCC-CeEEEEcCCC--CCCCCC---CCCCCCC-CCcHHHHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGL--TSDSAASYIRHLVFNTAKRG-WNVVVSNHRG--LGGVSI---TSDCFYN-AGWTEDAREVIGYLHH 229 (579)
Q Consensus 159 ~~~PiVlllHGl--~G~s~~~yi~~l~~~l~~~G-y~Vvv~D~RG--~G~S~~---~~~~~~~-~~~~eDl~~~l~~l~~ 229 (579)
+..|++|++||- .+++.+.. ..=...|+++| +-||.+|||= +|--.. ...+.+. .--..|...+++|+++
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 557999999982 22333322 12245677777 9999999993 443222 2111111 1235799999999987
Q ss_pred H---CC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 230 E---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 230 ~---~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
. ++ ..+|.++|+|.||+.++.+++.-.-+..+..+|+.|++..
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 6 32 3579999999999999988776332335777888887764
No 164
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.39 E-value=0.00062 Score=65.06 Aligned_cols=129 Identities=22% Similarity=0.396 Sum_probs=71.8
Q ss_pred cEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH-HH-HHHHHHhCCCeEEEEcC--CCC---CC
Q 008049 131 GMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI-RH-LVFNTAKRGWNVVVSNH--RGL---GG 203 (579)
Q Consensus 131 g~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi-~~-l~~~l~~~Gy~Vvv~D~--RG~---G~ 203 (579)
-..++..|.|++.. .+..-|++.++-|++.. .+.++ +. +.+.+.++|+.||.+|- ||. |.
T Consensus 26 c~Mtf~vylPp~a~------------~~k~~P~lf~LSGLTCT-~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~ 92 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAP------------RGKRCPVLFYLSGLTCT-HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGD 92 (283)
T ss_pred cceEEEEecCCCcc------------cCCcCceEEEecCCccc-chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCC
Confidence 34566677775532 23457999999999754 44444 33 44556778999999984 553 22
Q ss_pred CCCC----CCCCCCC----CcHHHHHHHHHHHHHHCC-----------CCcEEEEEEchhHHHHHHHHhhcCCC-CCccE
Q 008049 204 VSIT----SDCFYNA----GWTEDAREVIGYLHHEYP-----------KAPLFAIGTSIGANILVKYLGEEGEK-TPVAG 263 (579)
Q Consensus 204 S~~~----~~~~~~~----~~~eDl~~~l~~l~~~~p-----------~~~i~lvG~SlGG~ial~ya~~~~~~-~~v~a 263 (579)
.+.- ...+|-. -|.. --.+.+|+.++.| ..++.+.||||||.=|+-.+.+.+.. ..+.+
T Consensus 93 ~eswDFG~GAGFYvnAt~epw~~-~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSA 171 (283)
T KOG3101|consen 93 DESWDFGQGAGFYVNATQEPWAK-HYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSA 171 (283)
T ss_pred cccccccCCceeEEecccchHhh-hhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceec
Confidence 2100 0011110 0111 1122333333221 34689999999998887655555541 13666
Q ss_pred EEEEcCCcCh
Q 008049 264 AAAICSPWDL 273 (579)
Q Consensus 264 ~V~is~p~d~ 273 (579)
.+-||.|.+.
T Consensus 172 FAPI~NP~~c 181 (283)
T KOG3101|consen 172 FAPICNPINC 181 (283)
T ss_pred cccccCcccC
Confidence 6667766543
No 165
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.39 E-value=0.0026 Score=62.47 Aligned_cols=110 Identities=16% Similarity=0.205 Sum_probs=80.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-C--CeEEEEcCCCCCCCCCCCCCCCC------CCcHHHHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-G--WNVVVSNHRGLGGVSITSDCFYN------AGWTEDAREVIGYLHH 229 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-G--y~Vvv~D~RG~G~S~~~~~~~~~------~~~~eDl~~~l~~l~~ 229 (579)
.+++++++++|..|... .| ..++.++..+ + ..++.+-+.||..-+.+.....+ .+..+.+..-++++++
T Consensus 27 ~~~~li~~IpGNPG~~g-FY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCchh-HH-HHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 56799999999987544 45 7888887664 2 56999999998876522111111 1334678888888887
Q ss_pred HCC-CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 230 EYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 230 ~~p-~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
-.| +.+++++|||.|+.+.++.+-......+|..++++-|.
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 766 56899999999999999999866555578888887654
No 166
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.34 E-value=0.00064 Score=71.48 Aligned_cols=105 Identities=21% Similarity=0.211 Sum_probs=74.7
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCe---EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 239 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lv 239 (579)
.++++||+ +.....+ ..+...+...||. +..+++++-... . + .....+.+...++.+....+..++.++
T Consensus 61 pivlVhG~-~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~--~---~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 61 PIVLVHGL-GGGYGNF-LPLDYRLAILGWLTNGVYAFELSGGDGT-Y--S---LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred eEEEEccC-cCCcchh-hhhhhhhcchHHHhcccccccccccCCC-c--c---ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 48899998 4444444 5666677777887 888888765111 1 1 122335566666666666666899999
Q ss_pred EEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChhh
Q 008049 240 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 275 (579)
Q Consensus 240 G~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~~ 275 (579)
||||||.++..|++..+....|+.++.+++|-....
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 999999999988888885558999999998865543
No 167
>PLN02606 palmitoyl-protein thioesterase
Probab=97.33 E-value=0.012 Score=60.23 Aligned_cols=103 Identities=11% Similarity=0.083 Sum_probs=64.5
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCcEEEEE
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPLFAIG 240 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~--~p~~~i~lvG 240 (579)
||+.||++.+....-+..+.+.+.+. |.-+.++- .|-+. ...+.....+.+..+.+.|+.. ..+ -+.++|
T Consensus 29 vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~~-G~naIG 101 (306)
T PLN02606 29 FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELSE-GYNIVA 101 (306)
T ss_pred EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhcC-ceEEEE
Confidence 77999995222222357777777533 65444443 23111 1112223345666666666541 122 499999
Q ss_pred EchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 241 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 241 ~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
+|-||.++-.++.+.+...+|.-.|++++|-..
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 999999999999988764579999999987543
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.32 E-value=0.00084 Score=67.74 Aligned_cols=73 Identities=18% Similarity=0.129 Sum_probs=48.3
Q ss_pred cccccCCCc-ccEEEEEeCCCCCCCCCCcchHHHhcCC-CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008049 349 SSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANK-NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 422 (579)
Q Consensus 349 ~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~-~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~ 422 (579)
....+..+. +|+|+++|.+|.++|............. +.+...+++++|....... +...-..+.+.+|+.+.
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP-PAVEQALDKLAEFLERH 297 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc-HHHHHHHHHHHHHHHHh
Confidence 344555665 8999999999999998755443333333 6778888889998765310 11013557788888764
No 169
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.32 E-value=0.00075 Score=73.62 Aligned_cols=160 Identities=18% Similarity=0.043 Sum_probs=96.9
Q ss_pred CCcchhHhhhhhhhcC-CCCCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccH
Q 008049 99 LSSPHIQTAFLHFFGR-PPCFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAAS 177 (579)
Q Consensus 99 l~~ghlQT~~~~~~~~-~~~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~ 177 (579)
+..+-++++-...... ...+.-+...-+..||..|.+-... .+.. . +..|++|.--|..+-+...
T Consensus 372 ~~~~eLe~ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~------------~-d~~pTll~aYGGF~vsltP 437 (648)
T COG1505 372 LFGGELEVIREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGAK------------K-DENPTLLYAYGGFNISLTP 437 (648)
T ss_pred cCCceehhhhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCCc------------C-CCCceEEEeccccccccCC
Confidence 3444466653322211 1122323344566799999876654 2321 1 3567776666543444433
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCC----CCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEEchhHHHHHHH
Q 008049 178 YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKY 251 (579)
Q Consensus 178 yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~----~~~~~~~eDl~~~l~~l~~~~--p~~~i~lvG~SlGG~ial~y 251 (579)
..........++|..-+.-|.||=|.-....-+ ..-..-.+|+.++.+.+.++. ..+++.+.|-|-||.++...
T Consensus 438 ~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~a 517 (648)
T COG1505 438 RFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAA 517 (648)
T ss_pred ccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEee
Confidence 334444677788999999999997764321100 000122489999999998774 23479999999999999888
Q ss_pred HhhcCCCCCccEEEEEcCCcChh
Q 008049 252 LGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 252 a~~~~~~~~v~a~V~is~p~d~~ 274 (579)
+.+.|+ .+.++|+-.|-.|+.
T Consensus 518 lTQrPe--lfgA~v~evPllDMl 538 (648)
T COG1505 518 LTQRPE--LFGAAVCEVPLLDML 538 (648)
T ss_pred eccChh--hhCceeeccchhhhh
Confidence 889998 555555444444553
No 170
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.26 E-value=0.00065 Score=75.58 Aligned_cols=127 Identities=20% Similarity=0.112 Sum_probs=75.0
Q ss_pred CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCc--cHHHHHHHHHHHhCCCeEEEEcCCC--CC
Q 008049 129 DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSA--ASYIRHLVFNTAKRGWNVVVSNHRG--LG 202 (579)
Q Consensus 129 DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~--G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G 202 (579)
+..-|.|+.+.|.... .....|++|++||.+ .++. ..| .-...+++++.-||.+|||= +|
T Consensus 105 sEDCL~LnI~~P~~~~------------~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~G 170 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNAS------------SNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFG 170 (535)
T ss_dssp ES---EEEEEEETSSS------------STTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHH
T ss_pred CchHHHHhhhhccccc------------cccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEecccccccc
Confidence 3356888888875532 113679999999832 2222 233 33455677899999999993 33
Q ss_pred CCCCCCCCC--CCCCcHHHHHHHHHHHHHHC---C--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 203 GVSITSDCF--YNAGWTEDAREVIGYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 203 ~S~~~~~~~--~~~~~~eDl~~~l~~l~~~~---p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
.-....... .+. -..|...+++|+++.- + ..+|.++|+|.||..+...+.....+..+.++|+.|+.
T Consensus 171 fl~~~~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 171 FLSLGDLDAPSGNY-GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp H-BSSSTTSHBSTH-HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred cccccccccCchhh-hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 221111111 121 2479999999999863 2 35799999999999888766653334479999999873
No 171
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.07 E-value=0.0056 Score=58.35 Aligned_cols=84 Identities=13% Similarity=0.046 Sum_probs=56.6
Q ss_pred HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCC-C
Q 008049 180 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-K 258 (579)
Q Consensus 180 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~-~ 258 (579)
..++..+.. ++.|++++.+|++.+.... ....+.....++.+....+..++.++|||+||.++...+..... .
T Consensus 16 ~~~~~~l~~-~~~v~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 16 ARLAAALRG-RRDVSALPLPGFGPGEPLP-----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHhcCC-CccEEEecCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 667777754 6899999999998654321 11122233345556666667799999999999999877765322 1
Q ss_pred CCccEEEEEcC
Q 008049 259 TPVAGAAAICS 269 (579)
Q Consensus 259 ~~v~a~V~is~ 269 (579)
..+.+++++.+
T Consensus 90 ~~~~~l~~~~~ 100 (212)
T smart00824 90 IPPAAVVLLDT 100 (212)
T ss_pred CCCcEEEEEcc
Confidence 25778877764
No 172
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.07 E-value=0.026 Score=57.80 Aligned_cols=105 Identities=12% Similarity=0.100 Sum_probs=67.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCcE
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPL 236 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~--~p~~~i 236 (579)
..| +|+.||++.+....-+..+.+.+.+. |.-+.++.. |.+ . ...+.....+.+..+.+.++.. ..+ -+
T Consensus 25 ~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~--~-~~s~~~~~~~Qve~vce~l~~~~~l~~-G~ 96 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG--V-GDSWLMPLTQQAEIACEKVKQMKELSQ-GY 96 (314)
T ss_pred CCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC--c-cccceeCHHHHHHHHHHHHhhchhhhC-cE
Confidence 345 77999994333333556777777543 665555533 333 1 1223333445666666666541 222 49
Q ss_pred EEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 237 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 237 ~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
.++|||-||.++-.++.+.++..+|.-.|++++|-.
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999988876457999999998754
No 173
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.99 E-value=0.002 Score=69.14 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=66.4
Q ss_pred HHHHHHHHHHhCCCeE------EEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHH
Q 008049 178 YIRHLVFNTAKRGWNV------VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 251 (579)
Q Consensus 178 yi~~l~~~l~~~Gy~V------vv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~y 251 (579)
|+..+++.|.+.||.. .-+|+|=--. ........+...|+.+.+.. +.|+++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~--------~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA--------ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh--------hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 5689999999988743 2267772211 11234577888888887776 7799999999999999999
Q ss_pred HhhcCCC----CCccEEEEEcCCcChh
Q 008049 252 LGEEGEK----TPVAGAAAICSPWDLL 274 (579)
Q Consensus 252 a~~~~~~----~~v~a~V~is~p~d~~ 274 (579)
+...+.. ..|++.|.+++|+...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9887542 3699999999998653
No 174
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.007 Score=58.02 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=74.5
Q ss_pred CCCcEEEEECCCCCCCccHHHH--------------HHHHHHHhCCCeEEEEcCCCCCC--CCCCCCCCCCCCcHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIR--------------HLVFNTAKRGWNVVVSNHRGLGG--VSITSDCFYNAGWTEDARE 222 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~--------------~l~~~l~~~Gy~Vvv~D~RG~G~--S~~~~~~~~~~~~~eDl~~ 222 (579)
.....+|++||-+--....|.+ .+++++.+.||.|+++|.--+-+ .....+..|...-.+-+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3445899999973222333443 34567788999999998653221 0112233444344455555
Q ss_pred HHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 223 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 223 ~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
+-.++........+++|.||.||...+.++.+.+...+|.++++..+++.
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 54444433334579999999999999999999988778888888777643
No 175
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.76 E-value=0.0038 Score=69.94 Aligned_cols=103 Identities=17% Similarity=0.262 Sum_probs=62.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh----------------CCCeEEEEcCCC-----CCCCCCCCCCCCCCCcHH
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAK----------------RGWNVVVSNHRG-----LGGVSITSDCFYNAGWTE 218 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~----------------~Gy~Vvv~D~RG-----~G~S~~~~~~~~~~~~~e 218 (579)
++-.|+|+||..|+-.. +|.++..+.. ..|+-++.|.-+ ||++- ...++
T Consensus 88 sGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtE 157 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTE 157 (973)
T ss_pred CCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHH
Confidence 34458999999775443 4677665542 125556666543 22210 12346
Q ss_pred HHHHHHHHHHHHCCC---------CcEEEEEEchhHHHHHHHHhhcCC-CCCccEEEEEcCCcC
Q 008049 219 DAREVIGYLHHEYPK---------APLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWD 272 (579)
Q Consensus 219 Dl~~~l~~l~~~~p~---------~~i~lvG~SlGG~ial~ya~~~~~-~~~v~a~V~is~p~d 272 (579)
-+.+++.+|...|.. ..++++||||||.+|...+..... ...|.-++..++|..
T Consensus 158 YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 158 YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 677777777665532 239999999999999766543211 114666677776653
No 176
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.62 E-value=0.044 Score=53.53 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=47.6
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHH-hCCCe-EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTA-KRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~-~~Gy~-Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
.-+||++-|+ |...+. ..+|. ..+|. ++++|||-.-- + .|+ ..| ..|.+
T Consensus 11 ~~LilfF~GW-g~d~~~-----f~hL~~~~~~D~l~~yDYr~l~~-----d--------~~~--------~~y--~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGW-GMDPSP-----FSHLILPENYDVLICYDYRDLDF-----D--------FDL--------SGY--REIYL 61 (213)
T ss_pred CeEEEEEecC-CCChHH-----hhhccCCCCccEEEEecCccccc-----c--------ccc--------ccC--ceEEE
Confidence 4689999999 433332 23332 33554 45678874321 0 011 122 47999
Q ss_pred EEEchhHHHHHHHHhhcCCCCCccEEEEEcC
Q 008049 239 IGTSIGANILVKYLGEEGEKTPVAGAAAICS 269 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~~~~v~a~V~is~ 269 (579)
||+|||=.+|.+++... ++...++|++
T Consensus 62 vAWSmGVw~A~~~l~~~----~~~~aiAING 88 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGI----PFKRAIAING 88 (213)
T ss_pred EEEeHHHHHHHHHhccC----CcceeEEEEC
Confidence 99999999998887653 4677777775
No 177
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.58 E-value=0.015 Score=61.32 Aligned_cols=110 Identities=14% Similarity=0.119 Sum_probs=68.6
Q ss_pred CCcEEEEECCCCCC---Ccc--HHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008049 160 TTPIAIVIPGLTSD---SAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 234 (579)
Q Consensus 160 ~~PiVlllHGl~G~---s~~--~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~ 234 (579)
..|+||++||.+-. ... ..+..+...+ + ...++++||.-...-. ....|. ....++.+..+++.+..+..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~--~~~~yP-tQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDE--HGHKYP-TQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEecccccccc--CCCcCc-hHHHHHHHHHHHHHhccCCC
Confidence 45999999994211 111 1112222223 2 4589999997543100 011122 34578888899998666778
Q ss_pred cEEEEEEchhHHHHHHHHhhcCC---CCCccEEEEEcCCcChh
Q 008049 235 PLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLL 274 (579)
Q Consensus 235 ~i~lvG~SlGG~ial~ya~~~~~---~~~v~a~V~is~p~d~~ 274 (579)
+|+++|-|.||++++.++..-.. ...-+++|+|||-.++.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999877654222 12357899998755554
No 178
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.56 E-value=0.019 Score=60.81 Aligned_cols=107 Identities=19% Similarity=0.205 Sum_probs=71.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCCC-------------------C----C-C
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDC-------------------F----Y-N 213 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~-------------------~----~-~ 213 (579)
+.+.+|++++|++|+....|...+.+.++++ +..|+-+|+=|.|.-+..++. . . +
T Consensus 33 e~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~~~i~~ 112 (403)
T PF11144_consen 33 EIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDSESINT 112 (403)
T ss_pred CceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCcccccccc
Confidence 5667999999998888888877777777764 445555577776633221100 0 0 0
Q ss_pred ---------------------------------------------CCc--HHHHHHHHHHHHHHCC----CCcEEEEEEc
Q 008049 214 ---------------------------------------------AGW--TEDAREVIGYLHHEYP----KAPLFAIGTS 242 (579)
Q Consensus 214 ---------------------------------------------~~~--~eDl~~~l~~l~~~~p----~~~i~lvG~S 242 (579)
.|. +-|...++.++.+.++ .-|++++|+|
T Consensus 113 ~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s 192 (403)
T PF11144_consen 113 YDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSS 192 (403)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecC
Confidence 000 2377777777777764 2489999999
Q ss_pred hhHHHHHHHHhhcCCCCCccEEEEE
Q 008049 243 IGANILVKYLGEEGEKTPVAGAAAI 267 (579)
Q Consensus 243 lGG~ial~ya~~~~~~~~v~a~V~i 267 (579)
.||.++...+.-.|. .+++++=-
T Consensus 193 ~G~yla~l~~k~aP~--~~~~~iDn 215 (403)
T PF11144_consen 193 HGGYLAHLCAKIAPW--LFDGVIDN 215 (403)
T ss_pred cHHHHHHHHHhhCcc--ceeEEEec
Confidence 999999988877776 56665533
No 179
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.45 E-value=0.0079 Score=55.53 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCC--CCccEEEEEcCCc
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPW 271 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~--~~v~a~V~is~p~ 271 (579)
.++...++....++|..+++++||||||.+|..++...... ..+..++..++|-
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45666666666678999999999999999998877666442 2466778887764
No 180
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.26 E-value=0.01 Score=46.33 Aligned_cols=50 Identities=14% Similarity=0.256 Sum_probs=28.7
Q ss_pred CCCceEEEEEcCCCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc
Q 008049 117 CFSYRRQLFRLSDGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA 176 (579)
Q Consensus 117 ~~~y~r~~l~~~DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~ 176 (579)
..+.++..++++||..+.+.-..++... ......+|+|++.||+.++|..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~----------~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNS----------SNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTC----------TTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCC----------cccCCCCCcEEEECCcccChHH
Confidence 4567899999999999999877654311 1234678999999999876664
No 181
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.08 E-value=0.014 Score=52.59 Aligned_cols=38 Identities=16% Similarity=0.318 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhh
Q 008049 217 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~ 254 (579)
.+.+.+.++.+.++++..++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 35666777777788888899999999999998866554
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.00 E-value=0.0092 Score=65.83 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=61.9
Q ss_pred HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCC--CCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcC-
Q 008049 180 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG- 256 (579)
Q Consensus 180 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~--~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~- 256 (579)
..+++.|.+.||. -.|++|...-=..++... ...+...+...|+.+.+...+.|++++||||||.+++.++..-.
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 7899999999986 344444332100111101 12344678888888877776779999999999999998876321
Q ss_pred ---------C---CCCccEEEEEcCCcCh
Q 008049 257 ---------E---KTPVAGAAAICSPWDL 273 (579)
Q Consensus 257 ---------~---~~~v~a~V~is~p~d~ 273 (579)
. +..|++.|.|++|+-.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccCC
Confidence 0 1148899999998754
No 183
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.99 E-value=0.031 Score=58.79 Aligned_cols=105 Identities=21% Similarity=0.243 Sum_probs=73.2
Q ss_pred CcEEEEECCCCCCCcc-----HHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC----------CCcHHHHHHHHH
Q 008049 161 TPIAIVIPGLTSDSAA-----SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----------AGWTEDAREVIG 225 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~-----~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~----------~~~~eDl~~~l~ 225 (579)
+| |++.-|..|+-+. .++..+++ +.+--+|-..||=+|.|-.-..+.+. .....|.++++.
T Consensus 81 gP-IffYtGNEGdie~Fa~ntGFm~D~Ap---~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GP-IFFYTGNEGDIEWFANNTGFMWDLAP---ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred Cc-eEEEeCCcccHHHHHhccchHHhhhH---hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 45 6688887664332 12233333 33567888999999988433222111 122379999999
Q ss_pred HHHHHCC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 226 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 226 ~l~~~~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
++++... ..|++++|-|+||+++..+=.++|. .+.|+.+-+.|.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPv 202 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPV 202 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCce
Confidence 9998753 5689999999999999999889998 677777777664
No 184
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.96 E-value=0.05 Score=55.37 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=62.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCC----CeEEEEcCCCCCCCCCCCCCCCCC-CcHHH-HHHHHHHHHHHCC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGVSITSDCFYNA-GWTED-AREVIGYLHHEYP 232 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~G----y~Vvv~D~RG~G~S~~~~~~~~~~-~~~eD-l~~~l~~l~~~~p 232 (579)
.+.|++++.||-.- -...-+...++.+...| -.++.+|+ .........+++. ...++ ..+++=++.++||
T Consensus 96 ~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~---~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDY---IDVKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCC---CCHHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 67899999999521 11111234566666655 23333333 2221111122221 12222 2355668888887
Q ss_pred CC----cEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 233 KA----PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 233 ~~----~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
.. .=+++|.|+||.+++..+..+|+ .+..+++-|+.+
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~ 212 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSF 212 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCcc
Confidence 32 35799999999999999999998 666666555543
No 185
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.94 E-value=0.01 Score=51.28 Aligned_cols=60 Identities=25% Similarity=0.264 Sum_probs=48.0
Q ss_pred cccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 357 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 357 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
..|+|+|+++.||+.|.+.... ..+..++..++..++.||..+..+ . .-..+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~-~~~~l~~s~lvt~~g~gHg~~~~~---s-~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARA-MAARLPGSRLVTVDGAGHGVYAGG---S-PCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHH-HHHHCCCceEEEEeccCcceecCC---C-hHHHHHHHHHHHc
Confidence 5899999999999999886544 566778899999999999988632 1 2367888899864
No 186
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.82 E-value=0.078 Score=52.92 Aligned_cols=103 Identities=16% Similarity=0.121 Sum_probs=67.4
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCcEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPLF 237 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~--~p~~~i~ 237 (579)
.| +|++||++.+..+.-+.++.+.+.+. |..|.+++. |-| . ...+..-..+.+..+.+.++.. .++ =+.
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-~----~~s~l~pl~~Qv~~~ce~v~~m~~lsq-Gyn 95 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-I----KDSSLMPLWEQVDVACEKVKQMPELSQ-GYN 95 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-c----chhhhccHHHHHHHHHHHHhcchhccC-ceE
Confidence 45 77999995544443457788888775 788888875 333 0 1112222345566666666532 222 489
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
++|+|-||.++-.++..-++ .+|.-.|++++|-.
T Consensus 96 ivg~SQGglv~Raliq~cd~-ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDN-PPVKNFISLGGPHA 129 (296)
T ss_pred EEEEccccHHHHHHHHhCCC-CCcceeEeccCCcC
Confidence 99999999988666655544 68999999998753
No 187
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.80 E-value=0.15 Score=53.99 Aligned_cols=153 Identities=12% Similarity=0.107 Sum_probs=92.8
Q ss_pred CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc-ChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008049 232 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 310 (579)
Q Consensus 232 p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~-d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 310 (579)
.-.+.++.|.|==|..+...++.. + ||.|++-+.-.. ++.. .+... .+.|.......+..|...
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D-~--RV~aivP~Vid~LN~~~---~l~h~--y~~yG~~ws~a~~dY~~~------- 234 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVD-P--RVKAIVPIVIDVLNMKA---NLEHQ--YRSYGGNWSFAFQDYYNE------- 234 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccC-c--ceeEEeeEEEccCCcHH---HHHHH--HHHhCCCCccchhhhhHh-------
Confidence 356899999999999998777743 3 798888775332 2221 11110 000000000001111100
Q ss_pred ccChhHhhccCCHHHHHhhhhcccCCCCCHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008049 311 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 390 (579)
Q Consensus 311 ~~d~~~i~~~~sl~efd~~~t~~~~g~~s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 390 (579)
. ++.. .+-+......+..++..+.+++++|-++|+|..|++..+.............+.+.
T Consensus 235 -----g-------------i~~~-l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 235 -----G-------------ITQQ-LDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred -----C-------------chhh-cCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 0 0000 01112233445556667778889999999999999998887665555666678899
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 391 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 391 ~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
.+|+.+|-+-.. -....+..|+..+...
T Consensus 296 ~vPN~~H~~~~~-------~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 296 YVPNAGHSLIGS-------DVVQSLRAFYNRIQNG 323 (367)
T ss_pred eCCCCCcccchH-------HHHHHHHHHHHHHHcC
Confidence 999999966432 3678899999887554
No 188
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.67 E-value=0.063 Score=53.32 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=58.4
Q ss_pred CcEEEEECCC-CCCCc-cHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcH----HHHHHHHHHHHHHCC--
Q 008049 161 TPIAIVIPGL-TSDSA-ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT----EDAREVIGYLHHEYP-- 232 (579)
Q Consensus 161 ~PiVlllHGl-~G~s~-~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~----eDl~~~l~~l~~~~p-- 232 (579)
+.+|=|+-|. -|..- -.| +.+.+.|+++||.|++.=+.- .+-+.... +.+..+++.+..+..
T Consensus 17 ~gvihFiGGaf~ga~P~itY-r~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITY-RYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CEEEEEcCcceeccCcHHHH-HHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3456566662 23333 345 999999999999999986631 11111111 345555555655432
Q ss_pred --CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEc
Q 008049 233 --KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 268 (579)
Q Consensus 233 --~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is 268 (579)
.-|++-+|||||+-+-+.+...... .-++-++++
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~--~r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDV--ERAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccC--cccceEEEe
Confidence 2489999999999887766555443 235556665
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.66 E-value=0.021 Score=56.48 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCC---CCCccEEEEEcCC
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSP 270 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~---~~~v~a~V~is~p 270 (579)
+++...+..+.+++|+.++++.||||||.+|..++..... ...+. ++..++|
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P 166 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQP 166 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCC
Confidence 4566666667777899999999999999999876665332 11344 5555555
No 190
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.53 E-value=0.21 Score=53.72 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=77.0
Q ss_pred eEEEEEcC--CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHH----HH-------
Q 008049 121 RRQLFRLS--DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN----TA------- 187 (579)
Q Consensus 121 ~r~~l~~~--DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~----l~------- 187 (579)
..-++... .+..+-+ |+...... +.++|+||.+.|..|+|.... .+.+. +.
T Consensus 12 ~sGyl~~~~~~~~~lfy-w~~~s~~~-------------~~~~Pl~~wlnGGPG~SS~~g--~f~e~GP~~~~~~~~~~l 75 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFY-WFFESRND-------------PEDDPLILWLNGGPGCSSMWG--LFGENGPFRINPDGPYTL 75 (415)
T ss_dssp EEEEEEECTTTTEEEEE-EEEE-SSG-------------GCSS-EEEEEE-TTTB-THHH--HHCTTSSEEEETTSTSEE
T ss_pred EEEEEecCCCCCcEEEE-EEEEeCCC-------------CCCccEEEEecCCceeccccc--cccccCceEEeecccccc
Confidence 33456665 5666665 44433322 367899999999988776421 22110 00
Q ss_pred -------hCCCeEEEEcC-CCCCCCCCCCCCCCCCC---cHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHHHHh
Q 008049 188 -------KRGWNVVVSNH-RGLGGVSITSDCFYNAG---WTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG 253 (579)
Q Consensus 188 -------~~Gy~Vvv~D~-RG~G~S~~~~~~~~~~~---~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ya~ 253 (579)
.+-.+++-+|. -|.|-|-...+..+..+ ..+|+.++++..-.++| ..++++.|-|+||.-+-.++.
T Consensus 76 ~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 76 EDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp EE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred cccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 01267889994 48998865544432222 23566666666666666 458999999999986544432
Q ss_pred ----hcCC----CCCccEEEEEcCCcChh
Q 008049 254 ----EEGE----KTPVAGAAAICSPWDLL 274 (579)
Q Consensus 254 ----~~~~----~~~v~a~V~is~p~d~~ 274 (579)
.... ...++|+++.++-.+..
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred hhhhccccccccccccccceecCcccccc
Confidence 2221 24688888776655543
No 191
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.50 E-value=0.22 Score=47.39 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHC-CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 218 EDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 218 eDl~~~l~~l~~~~-p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
.++..+++-|+... |..++.++|||+|+.++-..+...+. .++.+|++++|-
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCC
Confidence 58888888888777 77899999999999999877776444 789999998874
No 192
>COG3150 Predicted esterase [General function prediction only]
Probab=95.49 E-value=0.086 Score=49.04 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
.++.+.++.+..........++|.|+||..+.+++..++- .+|++.|.
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~Gi-----rav~~NPa 90 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCGI-----RAVVFNPA 90 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhCC-----hhhhcCCC
Confidence 4455555555555555568999999999999999888764 44556554
No 193
>COG0627 Predicted esterase [General function prediction only]
Probab=95.48 E-value=0.042 Score=57.16 Aligned_cols=112 Identities=19% Similarity=0.306 Sum_probs=66.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHH-HHHHhCCCeEEEEcC--C------------CCCCCCCCCCCCC-----C-CCcH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLV-FNTAKRGWNVVVSNH--R------------GLGGVSITSDCFY-----N-AGWT 217 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~-~~l~~~Gy~Vvv~D~--R------------G~G~S~~~~~~~~-----~-~~~~ 217 (579)
.+-|++.++||.+++....|.+.=. ....+.|+.++..|- | |-+.+-.. ...+ . ..|-
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~-d~~~~~~~~~~~q~~ 130 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYS-DWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceec-ccccCccccCccchh
Confidence 5679999999998765455544333 345567888888632 2 22222111 0000 0 1111
Q ss_pred HH-HHHHHHHHHHHCC-C---CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 218 ED-AREVIGYLHHEYP-K---APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 218 eD-l~~~l~~l~~~~p-~---~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
.= +.++-..+.+.++ . ..-.++||||||.=|+.+|..+|+ ++..+...++..+.
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~ 189 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSP 189 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--hhceeccccccccc
Confidence 11 1122223334444 1 268999999999999999999987 78888888776554
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.16 E-value=0.7 Score=46.47 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=34.0
Q ss_pred HHHHHCC--CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 226 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 226 ~l~~~~p--~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
+|.++|. .++-.++|||+||.+++..+-.+|+ .+...+++||.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 4444453 4568999999999999999999988 68888877764
No 195
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.16 E-value=0.013 Score=62.78 Aligned_cols=91 Identities=14% Similarity=0.130 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhCCCe------EEEEcCCC-CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHH
Q 008049 177 SYIRHLVFNTAKRGWN------VVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 249 (579)
Q Consensus 177 ~yi~~l~~~l~~~Gy~------Vvv~D~RG-~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial 249 (579)
+|+..+++.+..-||. -+.+|+|= +-.+... ......+...++...+.++..|++++||||||.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~r------d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEER------DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHH------HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 5678899999988886 45567762 1111100 122357888888888888888999999999999999
Q ss_pred HHHhhcCCCC------CccEEEEEcCCcCh
Q 008049 250 KYLGEEGEKT------PVAGAAAICSPWDL 273 (579)
Q Consensus 250 ~ya~~~~~~~------~v~a~V~is~p~d~ 273 (579)
.++...+..+ -|++.+.++.||-.
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 9998877631 36777777776643
No 196
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.15 E-value=0.037 Score=52.83 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCC----CCCccEEEEEcCCcC
Q 008049 217 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICSPWD 272 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~----~~~v~a~V~is~p~d 272 (579)
+.++...++....+.|+.+++++|+|.||.++...+...+- ..+|.++++++.|..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 36777777777788999999999999999999999877111 126899999987753
No 197
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.12 E-value=0.13 Score=55.56 Aligned_cols=111 Identities=20% Similarity=0.191 Sum_probs=81.1
Q ss_pred CCCcEEEEECCCCCCCccHHH----HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC-------CCcHHHHHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-------AGWTEDAREVIGYL 227 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi----~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-------~~~~eDl~~~l~~l 227 (579)
++.|+-|++-|=+..+ ..|+ ..++..+.+.|-.|+.+.||=+|.|....+.... .....|++++|+.+
T Consensus 84 ~~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPES-DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCC-CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 4567777776642222 1121 1455667777999999999999988544332211 23347999999999
Q ss_pred HHHCC---CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 228 HHEYP---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 228 ~~~~p---~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
..+++ +.|.+.+|-|+-|.++..+=..+|+ .+.|+|+-++|..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--l~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--LTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--hheeeccccccee
Confidence 98874 2489999999999999999999999 8899998888863
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.83 E-value=0.066 Score=52.99 Aligned_cols=53 Identities=15% Similarity=0.271 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCC--CCCccEEEEEcCCc
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 271 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~--~~~v~a~V~is~p~ 271 (579)
....+.++.+.+.++. ++.+.|||+||++|...+....+ ..+|..++...+|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3455556666666766 59999999999999877766332 23788888887763
No 199
>PLN02454 triacylglycerol lipase
Probab=94.35 E-value=0.089 Score=56.25 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHCCCCc--EEEEEEchhHHHHHHHHhh
Q 008049 217 TEDAREVIGYLHHEYPKAP--LFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~~--i~lvG~SlGG~ial~ya~~ 254 (579)
.+++...++.+.++|+..+ |++.||||||.+|+..|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 4678888888888998766 9999999999999877644
No 200
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=94.23 E-value=0.091 Score=53.35 Aligned_cols=107 Identities=20% Similarity=0.219 Sum_probs=48.9
Q ss_pred CCcEEEEECCCCCCCc--cHHHHHHHHHHHh--CCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC--C
Q 008049 160 TTPIAIVIPGLTSDSA--ASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--K 233 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~--~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p--~ 233 (579)
.+| ||+.||++ ++. ..-+..+.+.+.+ -|--|..++. |-+.++-. ...+.....+.+..+.+.++. -| .
T Consensus 5 ~~P-vViwHGmG-D~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~-~~s~f~~v~~Qv~~vc~~l~~-~p~L~ 79 (279)
T PF02089_consen 5 PLP-VVIWHGMG-DSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV-ENSFFGNVNDQVEQVCEQLAN-DPELA 79 (279)
T ss_dssp S---EEEE--TT---S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH-HHHHHSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCc-EEEEEcCc-cccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh-hhhHHHHHHHHHHHHHHHHhh-Chhhh
Confidence 344 77999994 432 1112334333333 2655655554 22211000 001111112333444444433 22 1
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcC
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 272 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d 272 (579)
.=+.++|+|-||.++-.++.+.+. .+|.-.|++++|-.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggph~ 117 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGPHM 117 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--TT
T ss_pred cceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCccc
Confidence 249999999999999989988865 37999999998753
No 201
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.06 E-value=0.092 Score=52.65 Aligned_cols=53 Identities=26% Similarity=0.322 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh
Q 008049 217 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
..+..+++..+++.||+++|.+-|||+||.+|..+...++- -+|+..+|.|..
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 35677788888999999999999999999999866666654 356667776553
No 202
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.06 E-value=0.092 Score=52.65 Aligned_cols=53 Identities=26% Similarity=0.322 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcChh
Q 008049 217 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
..+..+++..+++.||+++|.+-|||+||.+|..+...++- -+|+..+|.|..
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 35677788888999999999999999999999866666654 356667776553
No 203
>PLN00413 triacylglycerol lipase
Probab=93.97 E-value=0.13 Score=55.61 Aligned_cols=52 Identities=13% Similarity=0.282 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhh---cCC---CCCccEEEEEcCC
Q 008049 219 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGE---KTPVAGAAAICSP 270 (579)
Q Consensus 219 Dl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~---~~~---~~~v~a~V~is~p 270 (579)
++...++.+.+++|+.++++.|||+||++|...+.. +.+ ..++.++...++|
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 566777777788999999999999999999876642 111 1145567777765
No 204
>PLN02162 triacylglycerol lipase
Probab=93.93 E-value=0.13 Score=55.51 Aligned_cols=53 Identities=15% Similarity=0.234 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHh---hcCCC---CCccEEEEEcCC
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG---EEGEK---TPVAGAAAICSP 270 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~---~~~~~---~~v~a~V~is~p 270 (579)
..+.+.++.+..++|+.++++.|||+||.+|+.++. .+++. .++.+++..++|
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 345566666667788889999999999999987644 22221 135567777766
No 205
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.85 E-value=0.11 Score=50.39 Aligned_cols=80 Identities=24% Similarity=0.217 Sum_probs=50.9
Q ss_pred CeEEEEcCCCCCCCCCC-CC----CCCCCCcHHHHHHHHHHHHHHCC-CCcEEEEEEchhHHHHHHHHhhcCC----CCC
Q 008049 191 WNVVVSNHRGLGGVSIT-SD----CFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGE----KTP 260 (579)
Q Consensus 191 y~Vvv~D~RG~G~S~~~-~~----~~~~~~~~eDl~~~l~~l~~~~p-~~~i~lvG~SlGG~ial~ya~~~~~----~~~ 260 (579)
.+|+++=||=....... .. ......-..|+.++.++-.++++ ..|++++|||-|+.++.+++.++=+ ..+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~r 125 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKR 125 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHhh
Confidence 58888888743211111 00 11111223799999887777664 5699999999999999999987622 124
Q ss_pred ccEEEEEcCC
Q 008049 261 VAGAAAICSP 270 (579)
Q Consensus 261 v~a~V~is~p 270 (579)
+.++-+|+-+
T Consensus 126 LVAAYliG~~ 135 (207)
T PF11288_consen 126 LVAAYLIGYP 135 (207)
T ss_pred hheeeecCcc
Confidence 5566666544
No 206
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=93.48 E-value=0.19 Score=52.94 Aligned_cols=84 Identities=18% Similarity=0.161 Sum_probs=61.4
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 242 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~S 242 (579)
.-||.-|=+| ....=+.+..+|+++|+.|+.+|-.-+=-++.++ ....+|+..++++-..+.+..++.++|+|
T Consensus 262 ~av~~SGDGG--Wr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtP-----e~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGG--WRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTP-----EQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCc--hhhhhHHHHHHHHHCCCceeeeehhhhhhccCCH-----HHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4556666533 2222368889999999999999976544443332 24568999999999999988899999999
Q ss_pred hhHHHHHHHHh
Q 008049 243 IGANILVKYLG 253 (579)
Q Consensus 243 lGG~ial~ya~ 253 (579)
+|+-+.-....
T Consensus 335 fGADvlP~~~n 345 (456)
T COG3946 335 FGADVLPFAYN 345 (456)
T ss_pred ccchhhHHHHH
Confidence 99988754333
No 207
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.37 E-value=1 Score=49.06 Aligned_cols=111 Identities=15% Similarity=0.090 Sum_probs=64.1
Q ss_pred CCCcEEEEECCCCCCCccHH-HHHHHH-------------HHHh------CCCeEEEEc-CCCCCCCCCCCCCCCCC--C
Q 008049 159 DTTPIAIVIPGLTSDSAASY-IRHLVF-------------NTAK------RGWNVVVSN-HRGLGGVSITSDCFYNA--G 215 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~y-i~~l~~-------------~l~~------~Gy~Vvv~D-~RG~G~S~~~~~~~~~~--~ 215 (579)
.+.|+|+.+-|..|+|.... +..... .+.. +-.+++-+| .-|.|-|-...+..+.. .
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~ 143 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDIS 143 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 56799999999988775311 011111 1100 125788889 56888875443322221 1
Q ss_pred cHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHHHHhhcC--------CCCCccEEEEEcC
Q 008049 216 WTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEG--------EKTPVAGAAAICS 269 (579)
Q Consensus 216 ~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ya~~~~--------~~~~v~a~V~is~ 269 (579)
..+|+.+++...-+++| ..++++.|.|+||..+-.++.+-- ..-.++|+++-++
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 12466666655555665 468999999999986655544321 1125667665554
No 208
>PLN02934 triacylglycerol lipase
Probab=93.14 E-value=0.2 Score=54.77 Aligned_cols=53 Identities=19% Similarity=0.282 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhh---cCCC---CCccEEEEEcCC
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGEK---TPVAGAAAICSP 270 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~---~~~~---~~v~a~V~is~p 270 (579)
..+...++.+.+++|+.++++.|||+||.+|...+.. ..+. .++..++..++|
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsP 363 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQP 363 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCC
Confidence 3577777888888999999999999999999876532 1111 123456666655
No 209
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=92.94 E-value=0.79 Score=46.40 Aligned_cols=255 Identities=13% Similarity=0.231 Sum_probs=125.0
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
.|.|+++--+.| ......+..++.|.. --.|++.|+--.--.+.....+.....++-+.++++++ .|+ +.+++
T Consensus 103 dPkvLivapmsG-H~aTLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~--~hv~a 175 (415)
T COG4553 103 DPKVLIVAPMSG-HYATLLRGTVEALLP-YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD--AHVMA 175 (415)
T ss_pred CCeEEEEecccc-cHHHHHHHHHHHhcc-ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC--CcEEE
Confidence 467888888865 455566888888775 34788888876555554433332223333344444443 343 44555
Q ss_pred EchhHH---HHHHHHhhcCCCCCccEEEEEcCCcChhhhhHHHhh----h---HH----------------HHHHH----
Q 008049 241 TSIGAN---ILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGR----R---LI----------------QKIYD---- 290 (579)
Q Consensus 241 ~SlGG~---ial~ya~~~~~~~~v~a~V~is~p~d~~~~~~~l~~----~---~~----------------~~~~~---- 290 (579)
...-+. .+..++.+.++...-..++++++|.|........+. + |+ +++|.
T Consensus 176 VCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQ 255 (415)
T COG4553 176 VCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQ 255 (415)
T ss_pred EecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHHH
Confidence 444332 223334455443356788899999887543222111 0 00 01111
Q ss_pred --HHHHHhHHHHHhhhccccccccChhHhhccCCHHHHHhhhhcccCC-----CCCHHHHHHhCCcc-----c-----cc
Q 008049 291 --RALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK-----FETVDTYYRNCSSS-----T-----YV 353 (579)
Q Consensus 291 --~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~sl~efd~~~t~~~~g-----~~s~~~yy~~~s~~-----~-----~l 353 (579)
..+..++.+.+..|...+..+..-+. .++....+|.+.+...+.- ..++++.+.+.... + ..
T Consensus 256 lagFmsmNldrH~~aH~~~~~~Lv~~D~-~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vdp 334 (415)
T COG4553 256 LAGFMSMNLDRHIDAHKDFFLSLVKNDG-DSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVDP 334 (415)
T ss_pred hhhHhhcChhhhHHHHHHHHHHHHcccc-hhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCCh
Confidence 11222333333333222211111000 0112222333332221110 11222323222110 1 11
Q ss_pred CCC-cccEEEEEeCCCCCCCCCCcc--hHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008049 354 GNV-SIPLLCISSLDDPVCTVEAIP--WDECRANKN--VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 424 (579)
Q Consensus 354 ~~I-~vPvLiI~g~dDpivp~~~~~--~~~~~~~~~--~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~ 424 (579)
..| ++-++-|-|++|.+.-..... ..+|...|. .....-++.||.|-|.|..- +..+.-.+.+|+...-.
T Consensus 335 ~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrf-r~eIvPri~dFI~~~d~ 409 (415)
T COG4553 335 TAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRF-REEIVPRIRDFIRRYDR 409 (415)
T ss_pred hheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchH-HHHHHHHHHHHHHHhCc
Confidence 234 577889999999997765322 234444333 24456688999999997431 23566788999877643
No 210
>PLN02209 serine carboxypeptidase
Probab=92.81 E-value=1.6 Score=47.69 Aligned_cols=112 Identities=14% Similarity=0.113 Sum_probs=65.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH----------------HHHh------CCCeEEEEc-CCCCCCCCCCCCCCCCC-
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVF----------------NTAK------RGWNVVVSN-HRGLGGVSITSDCFYNA- 214 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~----------------~l~~------~Gy~Vvv~D-~RG~G~S~~~~~~~~~~- 214 (579)
++.|+|+.+-|..|+|... -.+.+ .+.. +-.+++-+| ..|.|-|-...+..+..
T Consensus 66 ~~~Pl~lWlnGGPG~SS~~--g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 143 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCLS--GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSD 143 (437)
T ss_pred CCCCEEEEECCCCcHHHhh--hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCC
Confidence 5679999999998877531 11111 0100 124778888 55788874333222211
Q ss_pred -CcHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHHHHhhc---C-----CCCCccEEEEEcCCcC
Q 008049 215 -GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE---G-----EKTPVAGAAAICSPWD 272 (579)
Q Consensus 215 -~~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ya~~~---~-----~~~~v~a~V~is~p~d 272 (579)
...+|+.++++..-+++| ..++++.|.|+||.-+-.++.+- . ..-.++|+++.++-.|
T Consensus 144 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 144 TSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 223556666655555666 46899999999997655544332 1 1125677776655444
No 211
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=92.33 E-value=0.23 Score=52.66 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=82.0
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC----CCcHHHHHHHHHHHHHHCCC
Q 008049 158 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----AGWTEDAREVIGYLHHEYPK 233 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~----~~~~eDl~~~l~~l~~~~p~ 233 (579)
+.++|+|+..-|+.- +....-......+ +-+-+.+.+|=+|.|.... ..+. ....+|.+.+++.++.-|+.
T Consensus 60 ~~drPtV~~T~GY~~-~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p-~DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNV-STSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEP-ADWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred CCCCCeEEEecCccc-ccCccccchhHhh---ccceEEEEEeeccCCCCCC-CCcccccHhHhhHHHHHHHHHHHhhccC
Confidence 467899999999854 3332313333333 2378899999999986543 2222 23358999999999999976
Q ss_pred CcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 234 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 234 ~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
+.+--|.|=||+.++.|=.-+|+ .|++.|....|.+.
T Consensus 135 -kWISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 135 -KWISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred -CceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 79999999999999988888898 79999999888765
No 212
>PLN02408 phospholipase A1
Probab=92.24 E-value=0.26 Score=52.06 Aligned_cols=38 Identities=29% Similarity=0.316 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHCCCC--cEEEEEEchhHHHHHHHHhh
Q 008049 217 TEDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~--~i~lvG~SlGG~ial~ya~~ 254 (579)
.+++.+.++.+.++|++. +|++.||||||.+|+..+..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 356777777788888764 49999999999999876654
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.95 E-value=0.28 Score=51.88 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=46.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCCCCCCCCC--CCcHHHHHHHHHHHHHHCCCCc
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG-VSITSDCFYN--AGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~-S~~~~~~~~~--~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
...-.|++.||+-| ....|++..+....+.--.. ++..||+-+ ...+-..... .+..+++.+.+.... -.+
T Consensus 78 k~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~-~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s----i~k 151 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDK-LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS----IEK 151 (405)
T ss_pred CCceEEEecccccc-ccHHHHHHHHHhhhcCCCcc-eEeeeccccchhhccccceeeecccHHHHhhhhhccc----cce
Confidence 34468999999987 33445566666666542111 444455332 2222222211 222334333332221 358
Q ss_pred EEEEEEchhHHHHH
Q 008049 236 LFAIGTSIGANILV 249 (579)
Q Consensus 236 i~lvG~SlGG~ial 249 (579)
|-.+|||+||.++.
T Consensus 152 ISfvghSLGGLvar 165 (405)
T KOG4372|consen 152 ISFVGHSLGGLVAR 165 (405)
T ss_pred eeeeeeecCCeeee
Confidence 99999999998865
No 214
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=91.48 E-value=0.67 Score=51.98 Aligned_cols=127 Identities=18% Similarity=0.124 Sum_probs=72.0
Q ss_pred CcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCC--CCccHH-HHHHHHHHHhCCCeEEEEcCCC--CCCC
Q 008049 130 GGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTS--DSAASY-IRHLVFNTAKRGWNVVVSNHRG--LGGV 204 (579)
Q Consensus 130 Gg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G--~s~~~y-i~~l~~~l~~~Gy~Vvv~D~RG--~G~S 204 (579)
...+.+.++.|.... ... .|++|++||..- ++...+ .......+..+..-||.+++|= +|.-
T Consensus 94 EDCLylNV~tp~~~~------------~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~ 160 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCS------------ESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFL 160 (545)
T ss_pred CCCceEEEeccCCCc------------cCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceee
Confidence 345677777764421 001 799999998521 121111 1233334455568899999982 3321
Q ss_pred -CCCCCCCCCCCcHHHHHHHHHHHHHHC-----CCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 205 -SITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 205 -~~~~~~~~~~~~~eDl~~~l~~l~~~~-----p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
........+.+ ..|...+++|+++.- ...+|.++|||.||..+..+......+..+..+|..+..
T Consensus 161 st~d~~~~gN~g-l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 161 STGDSAAPGNLG-LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred ecCCCCCCCccc-HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 11111112222 359999999998763 245799999999999886544322111235555655543
No 215
>PLN02571 triacylglycerol lipase
Probab=91.26 E-value=0.29 Score=52.44 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchhHHHHHHHHhh
Q 008049 218 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~--~i~lvG~SlGG~ial~ya~~ 254 (579)
+++.+.++.+.++|++. +|++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 56777777777778754 69999999999999877654
No 216
>PLN02847 triacylglycerol lipase
Probab=91.10 E-value=0.44 Score=52.98 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhh
Q 008049 219 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 219 Dl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~ 254 (579)
++...+..+..++|+-+++++||||||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344445555667898899999999999998765443
No 217
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.76 E-value=3.2 Score=43.67 Aligned_cols=245 Identities=14% Similarity=0.010 Sum_probs=118.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC--CCcE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPL 236 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p--~~~i 236 (579)
..+|+| ++=||+|+-+ .++........+.||.++-+-.+-+-.....+.+. -...+....+..+...+. ..|+
T Consensus 37 s~k~Iv-~~~gWag~~~-r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~---~sl~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIV-VLLGWAGAID-RNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRI---LSLSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccccEE-EEeeeccccc-hhHHHHHHHHhcCCceEEEecCccccccccccccc---chhhHHHHHHHHHhhhccCCcCce
Confidence 334655 5556656444 47777888889999999988776544322111111 112344355555555543 5588
Q ss_pred EEEEEchhHHHHHHHH-h--hc--CCCC-CccEEEEEcCCcChhhhhHHHhhhHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008049 237 FAIGTSIGANILVKYL-G--EE--GEKT-PVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 310 (579)
Q Consensus 237 ~lvG~SlGG~ial~ya-~--~~--~~~~-~v~a~V~is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 310 (579)
+.--+|+||..++... . .. +... ...+.+..+.|.............+.. ........+.+...... .
T Consensus 112 ~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~~~i~-~ 185 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-----PPDDYVARWARLNYHIT-L 185 (350)
T ss_pred EEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-----CchhhHHHHHhcCeEEE-E
Confidence 8889999998766433 1 11 2211 244566666665422111000000000 00000000000000000 0
Q ss_pred ccChhHhhccCCHHHHHhhhhcccCCCC-CHHHHHHhCCcccccCCCcccEEEEEeCCCCCCCCCCcchH---HHhcCCC
Q 008049 311 LANWEGIKKSRSIRDFDSHATCLVGKFE-TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRANKN 386 (579)
Q Consensus 311 ~~d~~~i~~~~sl~efd~~~t~~~~g~~-s~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~~~ 386 (579)
...+-. ......+.........+.. ..-++|. ..-.+...+.+.+.+..|.++|.+.+... .....-+
T Consensus 186 ~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~r~~-----~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~ 257 (350)
T KOG2521|consen 186 LTMAGN---EGGAYLLGPLAEKISMSRKYHFLDRYE-----EQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVN 257 (350)
T ss_pred EEeeec---ccchhhhhhhhhccccccchHHHHHHH-----hhhhcccccceeecCCccccccHHHHHHHHHHHHhcCce
Confidence 000000 0000000000000000100 0111111 11122256778888999999998866543 2345566
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 387 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 387 ~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
+..+-..++-|++++.. .+.-+.+...+|+......
T Consensus 258 v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 258 VKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred EEEeeccCccceeeecc---CcHHHHHHHHHHHHhcccc
Confidence 77777888999998874 3345889999999886543
No 218
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.96 E-value=0.44 Score=50.13 Aligned_cols=59 Identities=19% Similarity=0.341 Sum_probs=43.1
Q ss_pred CCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhh---cCCC-CCccEEEEEcCC
Q 008049 212 YNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGEK-TPVAGAAAICSP 270 (579)
Q Consensus 212 ~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~---~~~~-~~v~a~V~is~p 270 (579)
+...|...+.+.++.+...+|+-.+.+.||||||.+|...+.. .+.. ..-.+++..+.|
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 4445667899999999999999999999999999998865543 3321 123466666665
No 219
>PLN02324 triacylglycerol lipase
Probab=89.69 E-value=0.49 Score=50.70 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHCCCC--cEEEEEEchhHHHHHHHHhh
Q 008049 217 TEDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~~--~i~lvG~SlGG~ial~ya~~ 254 (579)
.+.+.+.|..+.++|++. .|.+.||||||.+|+..|..
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 356777777788888863 69999999999999876643
No 220
>PLN02719 triacylglycerol lipase
Probab=88.43 E-value=0.63 Score=50.95 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHCCC-----CcEEEEEEchhHHHHHHHHhh
Q 008049 217 TEDAREVIGYLHHEYPK-----APLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p~-----~~i~lvG~SlGG~ial~ya~~ 254 (579)
.+++.+.|+.+.++|++ .+|.+.||||||.+|+..|..
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 46777778888888874 379999999999999876643
No 221
>PLN02802 triacylglycerol lipase
Probab=88.19 E-value=0.68 Score=50.67 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchhHHHHHHHHhh
Q 008049 218 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~--~i~lvG~SlGG~ial~ya~~ 254 (579)
+++.+.++.+.++|++. .|++.||||||.+|+..+..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 56666677777778653 69999999999999866554
No 222
>PLN02753 triacylglycerol lipase
Probab=87.13 E-value=0.8 Score=50.33 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHCC-----CCcEEEEEEchhHHHHHHHHh
Q 008049 217 TEDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLG 253 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p-----~~~i~lvG~SlGG~ial~ya~ 253 (579)
.+++.+.|+.+..+|+ ..+|.+.||||||.+|+..|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3567777777777775 358999999999999987654
No 223
>PLN02310 triacylglycerol lipase
Probab=87.13 E-value=0.67 Score=49.59 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHCC----CCcEEEEEEchhHHHHHHHHhh
Q 008049 218 EDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 218 eDl~~~l~~l~~~~p----~~~i~lvG~SlGG~ial~ya~~ 254 (579)
+.+.+.++.+.+.|+ ..+|.+.||||||.+|+..+..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 455666666666553 4579999999999999876643
No 224
>PLN02761 lipase class 3 family protein
Probab=87.10 E-value=0.85 Score=50.09 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHCC------CCcEEEEEEchhHHHHHHHHh
Q 008049 217 TEDAREVIGYLHHEYP------KAPLFAIGTSIGANILVKYLG 253 (579)
Q Consensus 217 ~eDl~~~l~~l~~~~p------~~~i~lvG~SlGG~ial~ya~ 253 (579)
.+++.+.|+.+.+.|+ ..+|.+.||||||.+|+..+.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4677777888887773 347999999999999986654
No 225
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=86.91 E-value=3.6 Score=45.00 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=61.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHH---HHhCC---------------CeEEEEc-CCCCCCCCC--CCCCCCCCCcH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFN---TAKRG---------------WNVVVSN-HRGLGGVSI--TSDCFYNAGWT 217 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~---l~~~G---------------y~Vvv~D-~RG~G~S~~--~~~~~~~~~~~ 217 (579)
.++|+++.+-|..|+|...- .+.+. -...| =.++-+| .-|.|-|-. ........+..
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g--~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTG--LLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCceEEEecCCCChHhhhh--hhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccc
Confidence 57899999999988776422 22110 00001 2577778 567777753 11122223455
Q ss_pred HHHHHHHHHHHHHCC-----CCcEEEEEEchhHHHHHHHHhhc
Q 008049 218 EDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLGEE 255 (579)
Q Consensus 218 eDl~~~l~~l~~~~p-----~~~i~lvG~SlGG~ial~ya~~~ 255 (579)
+|+..+.+.+.+.+| .++.+++|-|+||.-+..+|.+-
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 899999988877665 24899999999998877776553
No 226
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=86.54 E-value=7.3 Score=42.62 Aligned_cols=113 Identities=15% Similarity=0.258 Sum_probs=67.4
Q ss_pred eEEEEEcC--CCcEEEEEeecCCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC--------
Q 008049 121 RRQLFRLS--DGGMIALDWLMGSTAGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG-------- 190 (579)
Q Consensus 121 ~r~~l~~~--DGg~ialdw~~~~~~~p~~~~~~~~~~~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~G-------- 190 (579)
..-+++.. +|..+-+..++. ... +...|+||.+-|..|+|.-. .+ +.+.|
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS-~~~-------------P~~dPlvLWLnGGPGCSSl~---G~---~~E~GPf~v~~~G 104 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFES-ENN-------------PETDPLVLWLNGGPGCSSLG---GL---FEENGPFRVKYNG 104 (454)
T ss_pred ccceEECCCCCCceEEEEEEEc-cCC-------------CCCCCEEEEeCCCCCccchh---hh---hhhcCCeEEcCCC
Confidence 33455555 567777644443 332 25679999999999988642 12 22222
Q ss_pred -------------CeEEEEcCC-CCCCCCCCCCCCCC---CCcHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHH
Q 008049 191 -------------WNVVVSNHR-GLGGVSITSDCFYN---AGWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVK 250 (579)
Q Consensus 191 -------------y~Vvv~D~R-G~G~S~~~~~~~~~---~~~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ 250 (579)
-+++-+|.| |-|-|=..++..+. .+-++|..+++...-+++| ..++++.|-|++|..+-.
T Consensus 105 ~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~ 184 (454)
T KOG1282|consen 105 KTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPA 184 (454)
T ss_pred CcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHH
Confidence 245666665 56665322222222 2233677776665556776 578999999999966555
Q ss_pred HHh
Q 008049 251 YLG 253 (579)
Q Consensus 251 ya~ 253 (579)
+|.
T Consensus 185 La~ 187 (454)
T KOG1282|consen 185 LAQ 187 (454)
T ss_pred HHH
Confidence 544
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=85.50 E-value=0.86 Score=50.03 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHCC----CCcEEEEEEchhHHHHHHHHhh
Q 008049 218 EDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 218 eDl~~~l~~l~~~~p----~~~i~lvG~SlGG~ial~ya~~ 254 (579)
+++.+.|..+.+.|+ ..+|.+.||||||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 445555555655554 3469999999999999876643
No 228
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=83.58 E-value=4.5 Score=40.07 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=46.8
Q ss_pred CCeEEEEcCCC-CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC-CCCcEEEEEEchhHHHHHHHHhhcCC---C-CCccE
Q 008049 190 GWNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGE---K-TPVAG 263 (579)
Q Consensus 190 Gy~Vvv~D~RG-~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~-p~~~i~lvG~SlGG~ial~ya~~~~~---~-~~v~a 263 (579)
|+.+..++++. ++-........+...-.+=+..+.+.|.... +..+++++|+|.||.++...+.+... . ..-..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 67888888887 2221111111222222222333344444322 56789999999999999877665422 1 12346
Q ss_pred EEEEcCCcC
Q 008049 264 AAAICSPWD 272 (579)
Q Consensus 264 ~V~is~p~d 272 (579)
.|+++.|..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 788887743
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=82.51 E-value=3.6 Score=43.33 Aligned_cols=43 Identities=23% Similarity=0.244 Sum_probs=32.9
Q ss_pred CCCcEEEEEEchhHHHHHHHHhhcCC---CCCccEEEEEcCCcChh
Q 008049 232 PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLL 274 (579)
Q Consensus 232 p~~~i~lvG~SlGG~ial~ya~~~~~---~~~v~a~V~is~p~d~~ 274 (579)
+++|+.+||||+|+-+....+.+-.+ ...|+-+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 67799999999999998766654433 22478999999887653
No 230
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=78.78 E-value=6.4 Score=43.65 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=62.6
Q ss_pred CCCcEEEEECCCC-----CCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--
Q 008049 159 DTTPIAIVIPGLT-----SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-- 231 (579)
Q Consensus 159 ~~~PiVlllHGl~-----G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~-- 231 (579)
..+-+|+-|||.+ .-|++.|.+.++..| |.-++.+||-=-...+ .....+++--+..|+....
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP-------FPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP-------FPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC-------CCcHHHHHHHHHHHHhcCHHH
Confidence 4556888899842 234567877666554 8899999995322221 2234577777777775431
Q ss_pred ---CCCcEEEEEEchhHHHHHHHHh---hcCCCCCccEEEEEcCCc
Q 008049 232 ---PKAPLFAIGTSIGANILVKYLG---EEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 232 ---p~~~i~lvG~SlGG~ial~ya~---~~~~~~~v~a~V~is~p~ 271 (579)
..++|+++|-|.||++..-.+. +++- ..-+|+++.-+|.
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gv-RvPDGl~laY~pt 508 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGV-RVPDGLMLAYPPT 508 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCC-CCCCceEEecChh
Confidence 2569999999999998543332 2222 1234666554443
No 231
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.71 E-value=4.9 Score=37.80 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=39.6
Q ss_pred HHHHHHHHHH-CCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCcCh
Q 008049 221 REVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 221 ~~~l~~l~~~-~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~d~ 273 (579)
++.-.|+.++ .|. ..++-|.||||..++++.-++|+ ...++|+.+..+|.
T Consensus 88 ~AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYda 138 (227)
T COG4947 88 RAYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHHhhcCC-CccccccchhhhhhhhhheeChh--HhhhheeecceeeH
Confidence 3344566554 354 46789999999999999999999 78899999888765
No 232
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=76.68 E-value=15 Score=38.10 Aligned_cols=97 Identities=19% Similarity=0.294 Sum_probs=63.5
Q ss_pred CCCcEEEEECCCC---CCCccHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCCCC------------CC-CCCCCcHHHHH
Q 008049 159 DTTPIAIVIPGLT---SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITS------------DC-FYNAGWTEDAR 221 (579)
Q Consensus 159 ~~~PiVlllHGl~---G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~------------~~-~~~~~~~eDl~ 221 (579)
..+.+|+++-|.. |...-.-+-.+...+.. .|-+++++=-.|.|...... .. ++..+....+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 4566787777732 11111122344555555 57899999888987552211 11 22234457788
Q ss_pred HHHHHHHHHC-CCCcEEEEEEchhHHHHHHHHhhc
Q 008049 222 EVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEE 255 (579)
Q Consensus 222 ~~l~~l~~~~-p~~~i~lvG~SlGG~ial~ya~~~ 255 (579)
.+..++...| |...|+++|+|-|+.++--+|+..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHH
Confidence 8888998888 678999999999999987777653
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=75.67 E-value=8.8 Score=40.03 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=42.0
Q ss_pred eEEEEcCC-CCCCCCCCCCCCCCC--CcHHHHHHHHHHHHHHCC---CCcEEEEEEchhHHHHHHHHh
Q 008049 192 NVVVSNHR-GLGGVSITSDCFYNA--GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG 253 (579)
Q Consensus 192 ~Vvv~D~R-G~G~S~~~~~~~~~~--~~~eDl~~~l~~l~~~~p---~~~i~lvG~SlGG~ial~ya~ 253 (579)
+++-+|.| |.|-|-...+..+.. ...+|+..+++..-+++| ..++++.|-|+||.-+-.++.
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHH
Confidence 57889988 788874433322221 223677777776667776 578999999999986655544
No 234
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=75.03 E-value=18 Score=36.95 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=33.4
Q ss_pred CcHHHHHHHHHHHHHHC-CCCcEEEEEEchhHHHHHHHHhhc
Q 008049 215 GWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEE 255 (579)
Q Consensus 215 ~~~eDl~~~l~~l~~~~-p~~~i~lvG~SlGG~ial~ya~~~ 255 (579)
+..+.+..+..++.+.| |..+|+++|+|-||.+|-.++..-
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 44577888888887777 567899999999999998777654
No 235
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=74.91 E-value=18 Score=34.48 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=33.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
..+|.+|++-|+.|+..+.-...+.+.|.++|++++++|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4568899999998877776667777889999999999984
No 236
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=72.88 E-value=5.6 Score=35.59 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=24.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCC
Q 008049 158 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW 191 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy 191 (579)
++.+|.|+-+||++|.....-.+-+++.+-+.|.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 3678999999999887665444556677777663
No 237
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=72.47 E-value=6.6 Score=42.84 Aligned_cols=103 Identities=18% Similarity=0.216 Sum_probs=60.8
Q ss_pred CCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCe-EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CC
Q 008049 156 SKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YP 232 (579)
Q Consensus 156 ~~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~--~p 232 (579)
|++-+.|..|.+-|+-. .+.+ .-...+.+.|.- .+.-|.|=-|++-......| -+-+.++|+.-.+. +.
T Consensus 284 PGD~KPPL~VYFSGyR~--aEGF--Egy~MMk~Lg~PfLL~~DpRleGGaFYlGs~ey----E~~I~~~I~~~L~~LgF~ 355 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP--AEGF--EGYFMMKRLGAPFLLIGDPRLEGGAFYLGSDEY----EQGIINVIQEKLDYLGFD 355 (511)
T ss_pred CcCCCCCeEEeeccCcc--cCcc--hhHHHHHhcCCCeEEeeccccccceeeeCcHHH----HHHHHHHHHHHHHHhCCC
Confidence 66677899999999843 3322 111223334543 44457887776532211111 12333333333222 23
Q ss_pred CCcEEEEEEchhHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008049 233 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 271 (579)
Q Consensus 233 ~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p~ 271 (579)
...+++-|.|||..=|+.|++.... .+|.++-|.
T Consensus 356 ~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 356 HDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred HHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 5579999999999999999988654 567777654
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=69.59 E-value=35 Score=37.77 Aligned_cols=88 Identities=16% Similarity=0.110 Sum_probs=59.3
Q ss_pred HHHHhCCCeEEEEcCCCCCCCCCCCCCC--CC--------CCcHHHHHHHHHHHHHHC---CCCcEEEEEEchhHHHHHH
Q 008049 184 FNTAKRGWNVVVSNHRGLGGVSITSDCF--YN--------AGWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVK 250 (579)
Q Consensus 184 ~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~--------~~~~eDl~~~l~~l~~~~---p~~~i~lvG~SlGG~ial~ 250 (579)
.....+||.++.-|- ||..+....... .+ .....+...+-+.|.+.| +...-+..|.|-||--++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 445567999999886 666554310101 11 111234444445555443 3346899999999999999
Q ss_pred HHhhcCCCCCccEEEEEcCCcChh
Q 008049 251 YLGEEGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 251 ya~~~~~~~~v~a~V~is~p~d~~ 274 (579)
.|.++|+ ..+|+++-+|.++..
T Consensus 132 ~AQryP~--dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 132 AAQRYPE--DFDGILAGAPAINWT 153 (474)
T ss_pred HHHhChh--hcCeEEeCCchHHHH
Confidence 9999999 799999999887654
No 239
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=69.03 E-value=4.8 Score=38.68 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=44.3
Q ss_pred CCC-cccEEEEEeCCCCCCCCCCc--chHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008049 354 GNV-SIPLLCISSLDDPVCTVEAI--PWDECRANKN--VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 421 (579)
Q Consensus 354 ~~I-~vPvLiI~g~dDpivp~~~~--~~~~~~~~~~--~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~ 421 (579)
..| ++++|.|-|+.|.|+..... ...+|...|. ....+.+++||.|.|.|.. -+..+.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~r-wr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSR-WREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchh-hhhhhhHHHHHHHHh
Confidence 445 67889999999999988632 2234544332 4566778999999998721 011244567777754
No 240
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=60.24 E-value=15 Score=34.21 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=31.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
+|.||++-|+.|+..+...+.+.+.|.+.|+.++.+|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 367999999998888777788888999999999999743
No 241
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=57.89 E-value=38 Score=41.07 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=57.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHH-HHHHHHHHCCCCcEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE-VIGYLHHEYPKAPLF 237 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~-~l~~l~~~~p~~~i~ 237 (579)
...|++.|+|-+.|. .... ..++..+ ..+-+|.-- + +.......+++++ .++.+++-.|..|.-
T Consensus 2121 se~~~~Ffv~pIEG~-tt~l-~~la~rl----------e~PaYglQ~-T--~~vP~dSies~A~~yirqirkvQP~GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGF-TTAL-ESLASRL----------EIPAYGLQC-T--EAVPLDSIESLAAYYIRQIRKVQPEGPYR 2185 (2376)
T ss_pred ccCCceEEEeccccc-hHHH-HHHHhhc----------CCcchhhhc-c--ccCCcchHHHHHHHHHHHHHhcCCCCCee
Confidence 455789999998653 2222 3333322 122233110 0 0111233455554 477788878999999
Q ss_pred EEEEchhHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008049 238 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 270 (579)
Q Consensus 238 lvG~SlGG~ial~ya~~~~~~~~v~a~V~is~p 270 (579)
++|+|+|+.++..++....+......++++...
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 999999999999888765543345557776543
No 242
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=55.68 E-value=38 Score=33.10 Aligned_cols=57 Identities=25% Similarity=0.317 Sum_probs=39.5
Q ss_pred CCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCC-eEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008049 157 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW-NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE 230 (579)
Q Consensus 157 ~~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy-~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~ 230 (579)
.+.+.-+|+++||..-.+.+.| ..+-..+.+.|| .|++...-|+.. +..+++++++.
T Consensus 134 l~k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~yP~----------------~d~vi~~l~~~ 191 (265)
T COG4822 134 LNKDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGYPL----------------VDTVIEYLRKN 191 (265)
T ss_pred cCcCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCCCc----------------HHHHHHHHHHc
Confidence 3456678999999866566666 555566778899 777766655432 67778888765
No 243
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=50.95 E-value=27 Score=31.66 Aligned_cols=46 Identities=24% Similarity=0.445 Sum_probs=34.5
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD 209 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~ 209 (579)
+|.+-|..++..+..++.++..|.++||+|.++=+-+||+.....+
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~p 47 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDPP 47 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCCC
Confidence 5677787777778888999999999999999888888887655433
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=50.75 E-value=50 Score=36.55 Aligned_cols=95 Identities=11% Similarity=-0.030 Sum_probs=57.6
Q ss_pred cccEEEEEeCCCCCCCCCCcchH---HHh--------cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 357 SIPLLCISSLDDPVCTVEAIPWD---ECR--------ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 357 ~vPvLiI~g~dDpivp~~~~~~~---~~~--------~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
--.+|+.||..|+++|+...... ... ...-.++.++|+.+||+--.+ +...-...++.+|.+.=...
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g--~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG--PDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC--CCCCCHHHHHHHHHhCCCCC
Confidence 46799999999999998843221 111 234578999999999996544 33334778899998864333
Q ss_pred CcccccccccCCCCCCCCCccccCCCceEe
Q 008049 426 PYMHVRKKVQEPGLHLSTESSIDQGPYLNV 455 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~s~~~~~p~~~~ 455 (579)
.....-+.... ........++..|.+-.
T Consensus 431 ~~l~at~~~~~--~~~~~tRpLC~YP~~a~ 458 (474)
T PF07519_consen 431 ETLVATKFDND--TGVGRTRPLCPYPKVAR 458 (474)
T ss_pred CeeEEEEecCC--cccccccccCCCCCcce
Confidence 22211111111 12445666777775433
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=49.40 E-value=1.3e+02 Score=25.70 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=54.3
Q ss_pred HHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchhHHHH--HHHHhhcCC
Q 008049 180 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANIL--VKYLGEEGE 257 (579)
Q Consensus 180 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ia--l~ya~~~~~ 257 (579)
..+.+.+..+||-.-.+.+|..|.+-. ..+..+..+-=.+.++.+.+.+|+.++++||=|--.=.- ..++.++|+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~---~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLS---GLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccc---ccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 566677777888777788888865421 122222222345677888899999999999999765432 345777888
Q ss_pred CCCccEEE
Q 008049 258 KTPVAGAA 265 (579)
Q Consensus 258 ~~~v~a~V 265 (579)
+|.++.
T Consensus 91 --~i~ai~ 96 (100)
T PF09949_consen 91 --RILAIY 96 (100)
T ss_pred --CEEEEE
Confidence 676654
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.99 E-value=32 Score=37.88 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=32.9
Q ss_pred CCCCcEEEEEEchhHHHHHHHHhh---cCCCCCccEEEEEcCCcChh
Q 008049 231 YPKAPLFAIGTSIGANILVKYLGE---EGEKTPVAGAAAICSPWDLL 274 (579)
Q Consensus 231 ~p~~~i~lvG~SlGG~ial~ya~~---~~~~~~v~a~V~is~p~d~~ 274 (579)
.+.+|+.+||||+|+-+....+.+ ..+-.-|.-+++.+.|....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 467899999999999998866543 22323588899999887553
No 247
>PF13396 PLDc_N: Phospholipase_D-nuclease N-terminal
Probab=47.45 E-value=8 Score=27.78 Aligned_cols=26 Identities=38% Similarity=0.979 Sum_probs=18.7
Q ss_pred ccchhhhHHHHHHhcccchhhhHHHHHhhc
Q 008049 538 KRSMWLLAYVAIITTWPLVGSALRFIFGKK 567 (579)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (579)
.+-.|+++ +.--|.+|.+++++++||
T Consensus 21 ~k~~W~~~----i~~~P~iG~i~Yl~~gr~ 46 (46)
T PF13396_consen 21 SKILWLIV----ILFFPIIGPILYLIFGRK 46 (46)
T ss_pred hhhHHHHH----HHHHHHHHHhheEEEeCC
Confidence 34455543 334699999999999986
No 248
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=44.38 E-value=37 Score=29.73 Aligned_cols=18 Identities=6% Similarity=0.062 Sum_probs=9.4
Q ss_pred CCCcEEEEECCCCCCCcc
Q 008049 159 DTTPIAIVIPGLTSDSAA 176 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~ 176 (579)
.+...+|++||+.|+--+
T Consensus 90 ~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 90 PNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp TT-EEEEEE--SS--GGG
T ss_pred CCCeEEEEECCCCccHHh
Confidence 445568999999886554
No 249
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=42.64 E-value=17 Score=40.53 Aligned_cols=53 Identities=21% Similarity=0.274 Sum_probs=34.3
Q ss_pred HHHHHHHHHHC-C-CCcEEEEEEchhHHHHHHHHhhc-----CC----CCCccEEEEEcCCcCh
Q 008049 221 REVIGYLHHEY-P-KAPLFAIGTSIGANILVKYLGEE-----GE----KTPVAGAAAICSPWDL 273 (579)
Q Consensus 221 ~~~l~~l~~~~-p-~~~i~lvG~SlGG~ial~ya~~~-----~~----~~~v~a~V~is~p~d~ 273 (579)
.++++.+.+.. + +.|++.+||||||.++=+++-.- |+ ...-.|++.++.|...
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 35555555432 3 67999999999998876655432 22 1134688888887543
No 250
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=40.90 E-value=1.5e+02 Score=29.56 Aligned_cols=92 Identities=18% Similarity=0.126 Sum_probs=51.1
Q ss_pred CCcEEEEECCCCC-CCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCC-CCCCCC-CCCcHHHHHHH------HHHHHHH
Q 008049 160 TTPIAIVIPGLTS-DSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI-TSDCFY-NAGWTEDAREV------IGYLHHE 230 (579)
Q Consensus 160 ~~PiVlllHGl~G-~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~-~~~~~~-~~~~~eDl~~~------l~~l~~~ 230 (579)
..|.|+|++--.. .....|+..+...+.+.|+.+..++...--.... ..+..| ..|.+--+.+. .+.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 3567999997532 2345688888888999999988887652100000 011111 22333222211 1223333
Q ss_pred CCCCcEEEEEEchhHHHHHHHH
Q 008049 231 YPKAPLFAIGTSIGANILVKYL 252 (579)
Q Consensus 231 ~p~~~i~lvG~SlGG~ial~ya 252 (579)
+.. -..++|.|.|++++....
T Consensus 110 ~~~-G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 VKN-GTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHC-CCEEEEECHHHHhhhccc
Confidence 222 378999999999876433
No 251
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=40.39 E-value=87 Score=32.02 Aligned_cols=65 Identities=23% Similarity=0.259 Sum_probs=43.6
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCCeEEEE------cCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH--HCCCCcEE
Q 008049 166 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVS------NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH--EYPKAPLF 237 (579)
Q Consensus 166 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~------D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~--~~p~~~i~ 237 (579)
++||..|++.. +..++..|++|+++ |+.|+|...... .-.+++.++++.+.+ ....-..+
T Consensus 10 Vv~G~vGn~AA------~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v------~~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 10 VVYGSVGNSAA------IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV------MPPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred EeecccccHhH------HHHHHHcCCceeeeceEEecCCCCCCCCCCcC------CCHHHHHHHHHHHHhcccccccCEE
Confidence 56787765443 44577789988877 689998753321 234778888888876 33445678
Q ss_pred EEEEc
Q 008049 238 AIGTS 242 (579)
Q Consensus 238 lvG~S 242 (579)
+-|+=
T Consensus 78 ltGYl 82 (281)
T COG2240 78 LTGYL 82 (281)
T ss_pred EEccC
Confidence 88873
No 252
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=40.14 E-value=39 Score=34.50 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=35.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 158 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
...+|++|++-|+.|+....+++.+..++.+.+-..+++|+-
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLD 56 (366)
T KOG1532|consen 15 AIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLD 56 (366)
T ss_pred cccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCC
Confidence 356788999999999988899999999999988878888763
No 253
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=38.83 E-value=33 Score=34.84 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=33.6
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
...|+||++.|+-++....-++.+...+-.+|++|.++.
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~ 91 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFK 91 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCC
Confidence 346999999999877777788999999999999999883
No 254
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=38.56 E-value=2.3e+02 Score=29.73 Aligned_cols=93 Identities=16% Similarity=0.248 Sum_probs=59.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH--------------HHHhCCCeEEEEcCC-CCCCCCCCCCCCCCCCc---HHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVF--------------NTAKRGWNVVVSNHR-GLGGVSITSDCFYNAGW---TEDA 220 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~--------------~l~~~Gy~Vvv~D~R-G~G~S~~~~~~~~~~~~---~eDl 220 (579)
..+|..+.+.|-.|.|...| -.+-+ .+.. -.++.+|.| |.|.|-......|.... ..|+
T Consensus 29 s~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl 105 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDL 105 (414)
T ss_pred cCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHH
Confidence 56789999999888777644 22221 2222 345555554 77776443333444322 2567
Q ss_pred HHHHHHHHHHC---CCCcEEEEEEchhHHHHHHHHhh
Q 008049 221 REVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGE 254 (579)
Q Consensus 221 ~~~l~~l~~~~---p~~~i~lvG~SlGG~ial~ya~~ 254 (579)
.++++.+-... ...|++++--|+||-++.+++.+
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 66666654443 36799999999999998877654
No 255
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=38.06 E-value=2.2 Score=42.65 Aligned_cols=95 Identities=20% Similarity=0.190 Sum_probs=52.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC----------CCCCCCCCCCCCCCCCCcH---HHHHHHHH
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH----------RGLGGVSITSDCFYNAGWT---EDAREVIG 225 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~----------RG~G~S~~~~~~~~~~~~~---eDl~~~l~ 225 (579)
..-|.+++.||++++.... ...+..++..++++...+. +|++.+............. .++...-.
T Consensus 47 ~~~p~v~~~h~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQS--LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY 124 (299)
T ss_pred ccCceEEeccCccccccCc--chHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHH
Confidence 4578899999996655442 2378888888998877764 3333322211111111000 11111111
Q ss_pred HHHHHCCCCcEEEEEEchhHHHHHHHHhhcC
Q 008049 226 YLHHEYPKAPLFAIGTSIGANILVKYLGEEG 256 (579)
Q Consensus 226 ~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~ 256 (579)
...... ..+....|.++|+..+..++...+
T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 125 RLLGAS-LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHhhh-cCcceEEEEEeeccchHHHhhcch
Confidence 111111 247888999999988888877665
No 256
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=36.98 E-value=2e+02 Score=27.95 Aligned_cols=85 Identities=15% Similarity=0.208 Sum_probs=50.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCC-----CCCCCCCCCcHHHHHHHHHHHH-----
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSI-----TSDCFYNAGWTEDAREVIGYLH----- 228 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~-----~~~~~~~~~~~eDl~~~l~~l~----- 228 (579)
..+.|++++--.+ ....|...+...+.+. |+.+..++... .... .....+-.+ .+...+++.++
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G--G~~~~~~~~l~~~~l~ 104 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG--GNTFNLLAQWREHGLD 104 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC--chHHHHHHHHHHcCHH
Confidence 4467899997644 4456778888889999 99999998754 1110 011111111 12222222222
Q ss_pred ----HHCCCCcEEEEEEchhHHHHHH
Q 008049 229 ----HEYPKAPLFAIGTSIGANILVK 250 (579)
Q Consensus 229 ----~~~p~~~i~lvG~SlGG~ial~ 250 (579)
+.+ .....++|.|.|+.++..
T Consensus 105 ~~l~~~~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 105 AILKAAL-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHH-HCCCEEEEECHhHHhhCC
Confidence 222 124789999999999875
No 257
>PRK00889 adenylylsulfate kinase; Provisional
Probab=36.07 E-value=69 Score=29.73 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=30.9
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
+.++++.|+.|+..+...+.++..+...|+.++.+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3488889999988888888888888888988888864
No 258
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=34.93 E-value=41 Score=33.41 Aligned_cols=75 Identities=15% Similarity=0.111 Sum_probs=48.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLF 237 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p-~~~i~ 237 (579)
...|+||++.|+-++....-++.+...+-.+|++|.++..+- ..+.-...+-......| ...|.
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt---------------~eE~~~p~lwRfw~~lP~~G~i~ 92 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS---------------DRERTQWYFQRYVQHLPAAGEIV 92 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC---------------HHHHcChHHHHHHHhCCCCCeEE
Confidence 346999999999877777778899999999999998874431 01112233333334444 45677
Q ss_pred EEEEchhHHHH
Q 008049 238 AIGTSIGANIL 248 (579)
Q Consensus 238 lvG~SlGG~ia 248 (579)
++=-|+=+-+.
T Consensus 93 IF~rSwY~~~l 103 (230)
T TIGR03707 93 LFDRSWYNRAG 103 (230)
T ss_pred EEeCchhhhHH
Confidence 77666655443
No 259
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=34.83 E-value=1.2e+02 Score=28.84 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=39.7
Q ss_pred EEECCCCCCCccHHHHHHHHHHHh----CCCeEEEEcCCCCCCCCCCC-CCCC---CCCcHHHHHHHHHHHHH
Q 008049 165 IVIPGLTSDSAASYIRHLVFNTAK----RGWNVVVSNHRGLGGVSITS-DCFY---NAGWTEDAREVIGYLHH 229 (579)
Q Consensus 165 lllHGl~G~s~~~yi~~l~~~l~~----~Gy~Vvv~D~RG~G~S~~~~-~~~~---~~~~~eDl~~~l~~l~~ 229 (579)
+++-|-+|+..+..++.++..++. ...+++++|..|.+...... +... .....+++.++++++..
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVE 113 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHH
Confidence 366677788888888888888887 68999999999764332211 1111 22345667777666654
No 260
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=34.44 E-value=56 Score=33.80 Aligned_cols=32 Identities=19% Similarity=0.405 Sum_probs=22.1
Q ss_pred CCCCcEEEEECCCCCCCccHHH-HHHHHHHHhCC
Q 008049 158 DDTTPIAIVIPGLTSDSAASYI-RHLVFNTAKRG 190 (579)
Q Consensus 158 ~~~~PiVlllHGl~G~s~~~yi-~~l~~~l~~~G 190 (579)
++.+|.|+=+||++|.... |+ +-+++.+...|
T Consensus 106 ~p~KPLvLSfHG~tGTGKN-~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKN-YVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCeEEEecCCCCCchh-HHHHHHHHHHHhcc
Confidence 4788999999999886554 53 44455555544
No 261
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=34.42 E-value=76 Score=30.04 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=35.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 203 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 203 (579)
.+.|+.+=|..|+..+..++.++..+..+|++|.++-+.|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 4456677798888888888999999998999999998877764
No 262
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=34.04 E-value=31 Score=35.28 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=44.9
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCC-------eEEEEcCCCCCCCCCCC--C-C-CCCC--C--cHHHHHHHHHHHH
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGW-------NVVVSNHRGLGGVSITS--D-C-FYNA--G--WTEDAREVIGYLH 228 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy-------~Vvv~D~RG~G~S~~~~--~-~-~~~~--~--~~eDl~~~l~~l~ 228 (579)
-|++.|- |+....-.+.++..+.+.|. +++.+|..|.=..+... + + .|.. . ...++.++++.++
T Consensus 27 ~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 4466675 44443344556666666787 99999999942221110 0 0 0100 0 1235666665553
Q ss_pred HHCCCCcEEEEEEch-hHHHHHHHH
Q 008049 229 HEYPKAPLFAIGTSI-GANILVKYL 252 (579)
Q Consensus 229 ~~~p~~~i~lvG~Sl-GG~ial~ya 252 (579)
+=+++|.|- ||.+.-.++
T Consensus 106 ------ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 106 ------PTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred ------CCEEEEeCCCCCCCCHHHH
Confidence 458999995 665544443
No 263
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.94 E-value=72 Score=33.02 Aligned_cols=85 Identities=22% Similarity=0.219 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCeEEEEcCCCCCCCCCCCC---CCCCCCcHHHHHHHHHHHHHHCCCC-----cEEEEEEch--------
Q 008049 180 RHLVFNTAKRGWNVVVSNHRGLGGVSITSD---CFYNAGWTEDAREVIGYLHHEYPKA-----PLFAIGTSI-------- 243 (579)
Q Consensus 180 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~---~~~~~~~~eDl~~~l~~l~~~~p~~-----~i~lvG~Sl-------- 243 (579)
.+.+..|.+.||.|+++|..-.|....... .++ .+...|-..+-+.+.+..+.+ -...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~-~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~ 92 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFY-EGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYD 92 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceE-EeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHh
Confidence 467888999999999999988776543322 233 344455443334443333332 234566664
Q ss_pred ----hHHHHHHHHhhcCCCCCccEEEEEcC
Q 008049 244 ----GANILVKYLGEEGEKTPVAGAAAICS 269 (579)
Q Consensus 244 ----GG~ial~ya~~~~~~~~v~a~V~is~ 269 (579)
|...++..+.+++ |..+|.-|+
T Consensus 93 NNv~gTl~Ll~am~~~g----v~~~vFSSt 118 (329)
T COG1087 93 NNVVGTLNLIEAMLQTG----VKKFIFSST 118 (329)
T ss_pred hchHhHHHHHHHHHHhC----CCEEEEecc
Confidence 4444445555443 556665553
No 264
>PRK07933 thymidylate kinase; Validated
Probab=33.30 E-value=83 Score=30.63 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=35.7
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 205 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 205 (579)
+|.+=|+-|+..+.-++.++++|.++|+.|++...+++|+++
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~~ 43 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRSV 43 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 567778888888888899999999999999999999877643
No 265
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=33.15 E-value=66 Score=29.68 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=30.8
Q ss_pred EEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 008049 165 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 202 (579)
Q Consensus 165 lllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 202 (579)
+.+-|..|+.....+..++..+.++|++|.++.+-+|+
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45558877777777788999999999999999987655
No 266
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=32.81 E-value=62 Score=35.13 Aligned_cols=44 Identities=11% Similarity=0.038 Sum_probs=27.9
Q ss_pred ccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccc
Q 008049 358 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLT 405 (579)
Q Consensus 358 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~ 405 (579)
.-+++.+|..||....... ...+..+..+++++|+|+.-+.+..
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~Dl~~~~ 420 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCSDLYPPN 420 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGGS---
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeeccccCCC
Confidence 5799999999999776522 2345677778999999999776533
No 267
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=32.28 E-value=2.3e+02 Score=28.80 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=27.5
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 200 (579)
++++++|+..+..+.+...+++.|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 46667776434445566789999999999998886554
No 268
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=30.71 E-value=82 Score=29.45 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=35.0
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 202 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 202 (579)
.|+=+=|+.++.....+..+++.|.++||+|.++-+-+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 3667778877777778899999999999999999999998
No 269
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=30.67 E-value=2.1e+02 Score=26.11 Aligned_cols=75 Identities=13% Similarity=0.260 Sum_probs=45.1
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008049 162 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 240 (579)
Q Consensus 162 PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG 240 (579)
+.-++-.|..|.....+...+-..+......++++-. |.-.. ... .....+.+.+..+++.+++.+|..++++++
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~-G~ND~--~~~-~~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFL-GTNDI--GKE-VSSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEe-ccccC--CCC-CCHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3456788887777666655554556666666666642 22221 111 111234577888888888877776777665
No 270
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=29.95 E-value=81 Score=25.12 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=25.0
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 166 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 166 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
++=|..|...+.....++..+++.|++|+++|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 34455566666677889999999999999999
No 271
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=29.13 E-value=2.2e+02 Score=28.59 Aligned_cols=91 Identities=14% Similarity=0.194 Sum_probs=48.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCe-EEEEcCCCCCC--CCCC------CCC-CCCCCcHHHHH------HH
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGG--VSIT------SDC-FYNAGWTEDAR------EV 223 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~RG~G~--S~~~------~~~-~~~~~~~eDl~------~~ 223 (579)
..|.|++++--. +....|...+.+.+.+.|+. |-.++.+--.. .+.. ... +...+.+.-+. .+
T Consensus 27 ~~~rI~~iptAS-~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~l 105 (250)
T TIGR02069 27 EDAIIVIITSAS-EEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTPL 105 (250)
T ss_pred CCceEEEEeCCC-CChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCcH
Confidence 346788999653 34446677888888999984 66666642111 1000 001 11223332222 11
Q ss_pred HHHHHHHCCCCcEEEEEEchhHHHHHHHH
Q 008049 224 IGYLHHEYPKAPLFAIGTSIGANILVKYL 252 (579)
Q Consensus 224 l~~l~~~~p~~~i~lvG~SlGG~ial~ya 252 (579)
.+.|++.+.. -..++|.|.|+++.....
T Consensus 106 ~~~l~~~~~~-G~vi~G~SAGA~i~~~~~ 133 (250)
T TIGR02069 106 LDRLRKRVHE-GIILGGTSAGAAVMSDTM 133 (250)
T ss_pred HHHHHHHHHc-CCeEEEccHHHHhcccce
Confidence 2233333322 378999999999875443
No 272
>CHL00175 minD septum-site determining protein; Validated
Probab=28.25 E-value=1.1e+02 Score=30.88 Aligned_cols=39 Identities=15% Similarity=0.275 Sum_probs=29.4
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 161 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 161 ~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
..+|.+.-|=+|...+....+++..|++.|++|+++|.=
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 346666666655555555678899999999999999874
No 273
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=27.31 E-value=1.7e+02 Score=31.25 Aligned_cols=66 Identities=8% Similarity=0.041 Sum_probs=45.2
Q ss_pred cCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008049 353 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 425 (579)
Q Consensus 353 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~~~w~~~~v~eFL~~~~~~ 425 (579)
-..+.+|-.+++|..|.+.++.............+.+..+|+..|..--. ...+.+.-|++.+...
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~-------~i~esl~~flnrfq~~ 390 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ-------FIKESLEPFLNRFQMY 390 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH-------HHHHHHHHHHHHHhcC
Confidence 35678999999999888887775544334445556788899999954322 3455666677776543
No 274
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=26.84 E-value=27 Score=34.64 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=31.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
..|+||++.|+-|+....-++.+...+-.+|++|.++.-+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4579999999987777777788888888999999998654
No 275
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.61 E-value=2.5e+02 Score=28.82 Aligned_cols=86 Identities=17% Similarity=0.119 Sum_probs=47.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCC---CCcHHHHHHHHHHHHH---HCC---CCcEEEEEEchhHHHHHHH
Q 008049 181 HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN---AGWTEDAREVIGYLHH---EYP---KAPLFAIGTSIGANILVKY 251 (579)
Q Consensus 181 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~---~~~~eDl~~~l~~l~~---~~p---~~~i~lvG~SlGG~ial~y 251 (579)
.-.+++..-...++++-| |...+...+- ..-.+--.++++.+.. ..| ..++++.|.|+|+.-+...
T Consensus 52 ~a~E~l~~GD~A~va~QY-----SylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 52 DALEYLYGGDVAIVAMQY-----SYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAA 126 (289)
T ss_pred hHHHHHhCCCeEEEEecc-----ccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhh
Confidence 344556554567777765 3222222111 1112233344444433 233 2369999999999876543
Q ss_pred Hh---hcCCCCCccEEEEEcCCcCh
Q 008049 252 LG---EEGEKTPVAGAAAICSPWDL 273 (579)
Q Consensus 252 a~---~~~~~~~v~a~V~is~p~d~ 273 (579)
.. .... +++|++..++|..-
T Consensus 127 f~~~~~~~~--~vdGalw~GpP~~s 149 (289)
T PF10081_consen 127 FDGLDDLRD--RVDGALWVGPPFFS 149 (289)
T ss_pred hccHHHhhh--hcceEEEeCCCCCC
Confidence 32 2223 69999999988643
No 276
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=26.61 E-value=88 Score=25.46 Aligned_cols=43 Identities=19% Similarity=0.331 Sum_probs=33.4
Q ss_pred CcHHHHHHHHHHHHHHC---CCCcEEEEEEchhHHHHHHHHhhcCC
Q 008049 215 GWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGEEGE 257 (579)
Q Consensus 215 ~~~eDl~~~l~~l~~~~---p~~~i~lvG~SlGG~ial~ya~~~~~ 257 (579)
++...+.+.++|++.+. +..++.++|-|-|=.++.+.++.++.
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 56688999999998743 23579999999999999988887755
No 277
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=26.57 E-value=76 Score=35.85 Aligned_cols=49 Identities=14% Similarity=0.163 Sum_probs=36.2
Q ss_pred CCC-cccEEEEEeCCCCCCCCCCcchHH-------HhcCCCEEEEEeCCCCcccccc
Q 008049 354 GNV-SIPLLCISSLDDPVCTVEAIPWDE-------CRANKNVVLATTWHGGHLAFFE 402 (579)
Q Consensus 354 ~~I-~vPvLiI~g~dDpivp~~~~~~~~-------~~~~~~~~l~~~~~GGH~gfle 402 (579)
.++ ..|++++||..|-++|.....+.. ........++.+.+|-|+.-|-
T Consensus 551 g~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~ 607 (690)
T PF10605_consen 551 GNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFL 607 (690)
T ss_pred CCcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhc
Confidence 356 789999999999999987443211 1223568899999999998653
No 278
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=26.48 E-value=92 Score=29.01 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=23.4
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 166 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 166 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
+..+=+|...+.....++..++++|++|+++|.=
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 3444434445555567899999999999999983
No 279
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=25.69 E-value=1.1e+02 Score=25.23 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=22.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 200 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 200 (579)
.++|+|++|++ |... ...+..|.+.||. +.++.|
T Consensus 60 ~~~~ivv~C~~--G~rs----~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAK--EGSS----QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCC--CCcH----HHHHHHHHHcCce--eEEeCC
Confidence 45688888875 2222 3456778889998 455554
No 280
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=25.10 E-value=2.1e+02 Score=26.08 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=42.8
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
.-++-.|+.|.........+...+......++++-. |.... ... .......+.+.++++.+++.+|+.++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~-G~ND~--~~~-~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYA-GDNDL--ASG-RTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEEE-ecCcc--cCC-CCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 346888998776554444444444444555555522 22111 100 1122345778888888888888777877764
No 281
>PRK03846 adenylylsulfate kinase; Provisional
Probab=25.10 E-value=1.2e+02 Score=28.83 Aligned_cols=40 Identities=10% Similarity=0.117 Sum_probs=31.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
..+|.++.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 4567899999998877777767777778778888888863
No 282
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=24.86 E-value=1.5e+02 Score=27.64 Aligned_cols=44 Identities=20% Similarity=0.359 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchhHHHHHHHHhhcCCCCCccEEE
Q 008049 218 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 265 (579)
Q Consensus 218 eDl~~~l~~l~~~~p~~~i~lvG~SlGG~ial~ya~~~~~~~~v~a~V 265 (579)
+++.+.++.++.+ ..+|+++|-|..|.+.+.+++..++ .|..++
T Consensus 55 ~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~--~I~~vv 98 (160)
T PF08484_consen 55 AELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDND--LIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TT--TS--EE
T ss_pred HHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcc--eeEEEE
Confidence 4555555555554 4579999999999999999988666 455554
No 283
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=24.53 E-value=3.2e+02 Score=28.66 Aligned_cols=100 Identities=18% Similarity=0.155 Sum_probs=54.7
Q ss_pred EEECCCCCCCccHHHHHHHHHHHhCC--CeEEEEc--CCCCCCCC--------CCCC-CCCCCCcHHHHHHHHHHHHHHC
Q 008049 165 IVIPGLTSDSAASYIRHLVFNTAKRG--WNVVVSN--HRGLGGVS--------ITSD-CFYNAGWTEDAREVIGYLHHEY 231 (579)
Q Consensus 165 lllHGl~G~s~~~yi~~l~~~l~~~G--y~Vvv~D--~RG~G~S~--------~~~~-~~~~~~~~eDl~~~l~~l~~~~ 231 (579)
|+++|+ | |....+..+++.+.... +.|+++| .++..--. .... ........+-+..+++++....
T Consensus 57 lL~YG~-G-SKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGY-G-SKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEec-C-hHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 588888 4 55556678888777653 5677776 23322100 0000 1111122344455566665554
Q ss_pred CCCcEEEEEEchhHHH--------HHHHHhhcCCCCCccEEEEEcC
Q 008049 232 PKAPLFAIGTSIGANI--------LVKYLGEEGEKTPVAGAAAICS 269 (579)
Q Consensus 232 p~~~i~lvG~SlGG~i--------al~ya~~~~~~~~v~a~V~is~ 269 (579)
+..+++++=|++=|-. ++..++..|. |.-++.+..
T Consensus 135 ~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~---I~lIASiDh 177 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPN---IHLIASIDH 177 (326)
T ss_pred CCCceEEEEECCCChhhcChHHHHHHHHHHcCCC---eEEEEeccC
Confidence 3668999999987755 3344444443 666665553
No 284
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=24.24 E-value=1.2e+02 Score=33.10 Aligned_cols=39 Identities=13% Similarity=0.262 Sum_probs=32.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
.+|.+|++-|..|...+.....++.++.++|++|++++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 357899999999888877778888899999999998853
No 285
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=24.06 E-value=85 Score=33.91 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=41.7
Q ss_pred cCCCcccEEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccC-cccHHHHHHHHH
Q 008049 353 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAA-GMWWVRAVNEYL 419 (579)
Q Consensus 353 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~gfleg~~~~-~~w~~~~v~eFL 419 (579)
+.+-.--+|+|+|++||..... ........+..+.+.|+|+|.+-+.++.+. +......|.+|.
T Consensus 347 vr~~~~rmlFVYG~nDPW~A~~---f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 347 VRNNGPRMLFVYGENDPWSAEP---FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HHhCCCeEEEEeCCCCCcccCc---cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3344567999999999987543 112234567788889999999888775432 223444555554
No 286
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.96 E-value=4.7e+02 Score=27.57 Aligned_cols=93 Identities=13% Similarity=0.162 Sum_probs=64.3
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc--EEEEEEch
Q 008049 166 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP--LFAIGTSI 243 (579)
Q Consensus 166 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~--i~lvG~Sl 243 (579)
+-|..+++.. .-+..-+++...+||.++.+|=-|-=... ....+.+..+.+-+....+.+| ++++.-+.
T Consensus 198 I~~~~G~DpA-aVafDAi~~Akar~~DvvliDTAGRLhnk--------~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 198 ISGKEGADPA-AVAFDAIQAAKARGIDVVLIDTAGRLHNK--------KNLMDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred EccCCCCCcH-HHHHHHHHHHHHcCCCEEEEeCcccccCc--------hhHHHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 4444323333 33457778888899999999987643321 2356778877777776655433 77777888
Q ss_pred hHHHHHHHHhhcCCCCCccEEEEE
Q 008049 244 GANILVKYLGEEGEKTPVAGAAAI 267 (579)
Q Consensus 244 GG~ial~ya~~~~~~~~v~a~V~i 267 (579)
-|.-++.=+..+.+...+.|+|+-
T Consensus 269 tGqnal~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 269 TGQNALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred cChhHHHHHHHHHHhcCCceEEEE
Confidence 888888888888776678888865
No 287
>PRK10824 glutaredoxin-4; Provisional
Probab=23.90 E-value=4.3e+02 Score=23.17 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=49.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008049 159 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 238 (579)
Q Consensus 159 ~~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~l 238 (579)
...|+|||..|........|.+.....|.+.|...-.+|.-. ..++...+..+.....-..|++
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~----------------d~~~~~~l~~~sg~~TVPQIFI 76 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ----------------NPDIRAELPKYANWPTFPQLWV 76 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC----------------CHHHHHHHHHHhCCCCCCeEEE
Confidence 356899999985444455565666677777774443444310 0234444444432211235888
Q ss_pred EEEchhHHHHHHHHhhcCC
Q 008049 239 IGTSIGANILVKYLGEEGE 257 (579)
Q Consensus 239 vG~SlGG~ial~ya~~~~~ 257 (579)
=|...||.--+.-+.+.++
T Consensus 77 ~G~~IGG~ddl~~l~~~G~ 95 (115)
T PRK10824 77 DGELVGGCDIVIEMYQRGE 95 (115)
T ss_pred CCEEEcChHHHHHHHHCCC
Confidence 8999999977766665554
No 288
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=23.80 E-value=82 Score=30.94 Aligned_cols=35 Identities=14% Similarity=0.396 Sum_probs=31.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
+|++-|+.|+....+.+++++.|.+++++|+...-
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 67899999988888889999999999999988754
No 289
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=23.13 E-value=2.5e+02 Score=29.23 Aligned_cols=68 Identities=21% Similarity=0.270 Sum_probs=42.5
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCC----CCCCCCCCC----CCcHHHHHHHHHHHHHHCCCCc
Q 008049 164 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV----SITSDCFYN----AGWTEDAREVIGYLHHEYPKAP 235 (579)
Q Consensus 164 VlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S----~~~~~~~~~----~~~~eDl~~~l~~l~~~~p~~~ 235 (579)
.|++-|- +|. +-+.++.++.++||+|++-=.-.-|.- ...+++..+ -...+.+.++.+++++..++..
T Consensus 31 ~VlITGC--DSG--fG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 31 AVLITGC--DSG--FGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred EEEEecC--CcH--HHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 6677773 344 346899999999999998643332210 011233322 2344789999999998766543
No 290
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.38 E-value=2.2e+02 Score=26.84 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=40.9
Q ss_pred HHHhCCCeEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEEchh
Q 008049 185 NTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIG 244 (579)
Q Consensus 185 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~eDl~~~l~~l~~~~p~~~i~lvG~SlG 244 (579)
.|.+.|++.+++|.=.+=-. + +......++.+.++.+++.++..++.++--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~----~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTP----P--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCC----C--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 37889999999998654211 1 222344789999999999988778999999986
No 291
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=22.32 E-value=39 Score=31.46 Aligned_cols=48 Identities=15% Similarity=0.195 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHH----HHHHHHCC----CCcEEEEEEchhHH
Q 008049 198 HRGLGGVSITSDCFYNAGWTEDAREVI----GYLHHEYP----KAPLFAIGTSIGAN 246 (579)
Q Consensus 198 ~RG~G~S~~~~~~~~~~~~~eDl~~~l----~~l~~~~p----~~~i~lvG~SlGG~ 246 (579)
.-|||..... ...+.....+.+...+ +.++++++ ..+|.++|.||+..
T Consensus 61 lVGHG~~~~~-~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFN-NQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTS-SSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCC-CceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3477765222 2222333457788888 77776652 24799999999887
No 292
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=22.02 E-value=1.3e+02 Score=31.19 Aligned_cols=59 Identities=22% Similarity=0.102 Sum_probs=36.8
Q ss_pred cccEEEEEeCCCCCCCCCCcchHHH-----------------------hcCCC-EEEEEeCCCCccccccccccCcccHH
Q 008049 357 SIPLLCISSLDDPVCTVEAIPWDEC-----------------------RANKN-VVLATTWHGGHLAFFEGLTAAGMWWV 412 (579)
Q Consensus 357 ~vPvLiI~g~dDpivp~~~~~~~~~-----------------------~~~~~-~~l~~~~~GGH~gfleg~~~~~~w~~ 412 (579)
.+++|+.+|..|-+|+.-....... +...+ ..++.+.++||+... .|. ...
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~---qP~--~al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY---RPN--ETF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCc---CHH--HHH
Confidence 4799999999998888632111000 11133 788888899999842 232 355
Q ss_pred HHHHHHHH
Q 008049 413 RAVNEYLG 420 (579)
Q Consensus 413 ~~v~eFL~ 420 (579)
+.+..|+.
T Consensus 308 ~m~~~fi~ 315 (319)
T PLN02213 308 IMFQRWIS 315 (319)
T ss_pred HHHHHHHc
Confidence 56666654
No 293
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=21.63 E-value=1.5e+02 Score=29.03 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=29.2
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 202 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 202 (579)
+|.+..+=+|...+....+++..++++|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4555555545555555678899999999999999986554
No 294
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=21.61 E-value=1.5e+02 Score=27.21 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=24.8
Q ss_pred EEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCC
Q 008049 165 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 199 (579)
Q Consensus 165 lllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 199 (579)
.+..+=+|...+....+++..++++|++|+++|.=
T Consensus 3 ~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 3 VVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444434445555678899999999999999764
No 295
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=21.60 E-value=1.3e+02 Score=29.34 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=30.1
Q ss_pred EECCCCCCCccHHHHHHHHHHH-hCCCeEEEEcCCC
Q 008049 166 VIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNHRG 200 (579)
Q Consensus 166 llHGl~G~s~~~yi~~l~~~l~-~~Gy~Vvv~D~RG 200 (579)
.+=|.+|+..+..++.+++.+. +.|+.++++|.=|
T Consensus 27 ~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 27 AIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4558888888888899999999 8899999999944
No 296
>PF13721 SecD-TM1: SecD export protein N-terminal TM region
Probab=21.37 E-value=69 Score=27.44 Aligned_cols=25 Identities=24% Similarity=0.516 Sum_probs=18.7
Q ss_pred ccchHHHHHHHHHHHHHhheeeeee
Q 008049 29 LIPISHYVLALSLLFVIVIYNFLEF 53 (579)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~y~~l~~ 53 (579)
.-|.|+|++.++++++.++|-.=++
T Consensus 3 ~yp~WKyllil~vl~~~~lyALPnl 27 (101)
T PF13721_consen 3 RYPLWKYLLILVVLLLGALYALPNL 27 (101)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhc
Confidence 3488999997777777777766553
No 297
>KOG3491 consensus Predicted membrane protein [Function unknown]
Probab=21.21 E-value=85 Score=23.93 Aligned_cols=22 Identities=36% Similarity=0.578 Sum_probs=17.9
Q ss_pred hhhhHHHHHHhcccchhhhHHHHHhh
Q 008049 541 MWLLAYVAIITTWPLVGSALRFIFGK 566 (579)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (579)
-|||++.-+|. .||++|=++|-
T Consensus 39 PwLlglFvFVV----cGSa~FqIIr~ 60 (65)
T KOG3491|consen 39 PWLLGLFVFVV----CGSALFQIIRT 60 (65)
T ss_pred hHHHHHHHHHh----hcHHHHHHHHH
Confidence 49999988875 69999988763
No 298
>PRK13768 GTPase; Provisional
Probab=21.20 E-value=1.4e+02 Score=29.99 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=29.8
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
-++++-|.+|...+.+...++..+...|.+|+++|.
T Consensus 3 ~~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 3 YIVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 366777887777778888999999999999999885
No 299
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=21.11 E-value=6.7e+02 Score=23.22 Aligned_cols=39 Identities=18% Similarity=0.305 Sum_probs=31.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcC
Q 008049 160 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 198 (579)
Q Consensus 160 ~~PiVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 198 (579)
..+.++++.|..|+..+...+.+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 457799999998888877778888888788888887764
No 300
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.05 E-value=1.5e+02 Score=29.96 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=30.0
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 204 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 204 (579)
++.++ |=+|...+....+++..|+++|++|+++|.=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 35556 744444555567889999999999999998766543
No 301
>TIGR03063 srtB_target sortase B cell surface sorting signal. Two different classes of sorting signal, both analogous to the sortase A signal LPXTG, may be recognized by the sortase SrtB. These are given as NXZTN and NPKXZ. Proteins sorted by this class of sortase are less common than the sortase A and LPXTG system. This model describes a number of cell surface protein C-terminal regions from Gram-positive bacteria that appear to be sortase B (SrtB) sorting signals.
Probab=20.66 E-value=47 Score=21.71 Aligned_cols=11 Identities=36% Similarity=0.473 Sum_probs=7.5
Q ss_pred chhhhHHHHHh
Q 008049 555 LVGSALRFIFG 565 (579)
Q Consensus 555 ~~~~~~~~~~~ 565 (579)
++||++|++.|
T Consensus 17 ~~~s~~~Li~k 27 (29)
T TIGR03063 17 FLGSGLFLIRK 27 (29)
T ss_pred HHHHHHHHhhc
Confidence 47888877743
No 302
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=20.63 E-value=8e+02 Score=23.97 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=28.3
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEcCCCC
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 201 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 201 (579)
++++.+++.++....++..++..|.+.|+.|.++-....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~ 40 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDE 40 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCC
Confidence 466777764444455668899999999999998866543
No 303
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.42 E-value=4e+02 Score=22.84 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=21.3
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCCeEEEEc
Q 008049 163 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 197 (579)
Q Consensus 163 iVlllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 197 (579)
+|+.+.+ |+.+..-..-+...|...||+|+.+.
T Consensus 2 vl~~~~~--~e~H~lG~~~~~~~l~~~G~~V~~lg 34 (119)
T cd02067 2 VVIATVG--GDGHDIGKNIVARALRDAGFEVIDLG 34 (119)
T ss_pred EEEEeeC--CchhhHHHHHHHHHHHHCCCEEEECC
Confidence 3455555 34555455667778888999996553
No 304
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=20.21 E-value=1.9e+02 Score=27.58 Aligned_cols=27 Identities=11% Similarity=0.358 Sum_probs=19.7
Q ss_pred CcHHHHHHHHHHHHHHCCCCcEEEEEE
Q 008049 215 GWTEDAREVIGYLHHEYPKAPLFAIGT 241 (579)
Q Consensus 215 ~~~eDl~~~l~~l~~~~p~~~i~lvG~ 241 (579)
...+-+..+++.|++..|..||+++-+
T Consensus 75 ~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 75 EFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp THHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 445778889999999999999988853
Done!