Your job contains 1 sequence.
>008050
MAAEEENPVSTSLPVSSAAVPDSQALISTIEATPSQPVQPIIPPVIPPMVSAVVPPIAPI
STIPPPQVPAPLAPLPVRPPVFKPPVPAQNGEVRTSDSESDRDEPGPTRASAVEYEISEE
SRQVRERQEKAKQDLLMKRRAAVLAVPTNDMAVRARLRRLGEPITFFGEREMERRDRLRM
LMAKLDSEGQLDRLMKALEEEEAAATATGADVEEEMLQYPFYTEGSKALLDARIDIAKYS
IAKAAKRLQQAQRRRDNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNL
LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS
LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH
PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW
DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAK
VTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008050
(579 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 1517 1.3e-155 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 860 1.6e-92 2
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 858 2.7e-92 2
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 858 2.7e-92 2
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 858 2.7e-92 2
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 858 2.7e-92 2
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 857 3.4e-92 2
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 845 2.4e-91 2
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 822 1.7e-88 2
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 799 1.5e-85 2
ASPGD|ASPL0000042645 - symbol:AN1468 species:162425 "Emer... 538 4.3e-76 3
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 697 2.0e-75 2
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 667 1.5e-65 1
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 474 3.8e-55 3
UNIPROTKB|G4MXN3 - symbol:MGG_01259 "Pre-mRNA splicing fa... 485 4.2e-55 2
SGD|S000006382 - symbol:PRP4 "Splicing factor" species:49... 546 1.0e-52 1
TAIR|locus:2063349 - symbol:AT2G05720 "AT2G05720" species... 493 4.2e-47 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 483 1.0e-44 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 430 2.0e-40 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 404 4.6e-40 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 404 4.6e-40 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 421 1.8e-39 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 421 1.8e-39 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 421 1.8e-39 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 421 1.8e-39 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 421 1.8e-39 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 421 1.8e-39 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 420 2.3e-39 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 427 1.6e-38 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 419 3.3e-38 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 409 3.4e-38 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 408 4.3e-38 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 405 8.9e-38 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 403 1.5e-37 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 399 3.9e-37 1
CGD|CAL0004633 - symbol:orf19.7343 species:5476 "Candida ... 353 8.2e-37 2
UNIPROTKB|Q5A3W6 - symbol:PRP4 "Potential spliceosomal U4... 353 8.2e-37 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 385 3.0e-36 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 389 4.4e-36 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 389 4.4e-36 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 385 1.2e-35 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 380 4.0e-35 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 382 2.1e-34 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 376 2.1e-34 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 375 3.2e-34 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 375 3.2e-34 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 277 1.8e-33 2
TAIR|locus:2051094 - symbol:MAC3B "MOS4-associated compl... 364 2.0e-33 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 369 2.5e-33 1
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 363 2.5e-33 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 363 2.5e-33 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 360 5.2e-33 1
UNIPROTKB|Q9AV81 - symbol:PUB72 "U-box domain-containing ... 359 8.0e-33 1
RGD|1359321 - symbol:Gnb4 "guanine nucleotide binding pro... 358 8.5e-33 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 358 8.5e-33 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 358 8.5e-33 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 338 1.1e-32 2
MGI|MGI:104581 - symbol:Gnb4 "guanine nucleotide binding ... 356 1.4e-32 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 359 1.8e-32 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 361 3.3e-32 1
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 351 4.7e-32 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 350 6.0e-32 1
UNIPROTKB|Q9HAV0 - symbol:GNB4 "Guanine nucleotide-bindin... 350 6.0e-32 1
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 350 6.0e-32 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 350 6.0e-32 1
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 350 6.9e-32 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 287 7.2e-32 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 351 9.3e-32 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 348 9.8e-32 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 348 9.8e-32 1
MGI|MGI:106247 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA proce... 348 9.8e-32 1
RGD|708496 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA processin... 348 9.8e-32 1
UNIPROTKB|Q9JMJ4 - symbol:Prpf19 "Pre-mRNA-processing fac... 348 9.8e-32 1
WB|WBGene00020423 - symbol:prp-19 species:6239 "Caenorhab... 347 1.3e-31 1
FB|FBgn0261119 - symbol:Prp19 "Prp19" species:7227 "Droso... 346 1.7e-31 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 345 2.0e-31 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 344 3.0e-31 1
ZFIN|ZDB-GENE-030131-823 - symbol:gnb1a "guanine nucleoti... 343 3.3e-31 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 352 3.3e-31 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 352 3.5e-31 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 352 3.6e-31 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 352 3.6e-31 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 352 3.6e-31 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 286 3.6e-31 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 340 6.9e-31 1
UNIPROTKB|P62871 - symbol:GNB1 "Guanine nucleotide-bindin... 340 6.9e-31 1
UNIPROTKB|P62872 - symbol:GNB1 "Guanine nucleotide-bindin... 340 6.9e-31 1
UNIPROTKB|P62873 - symbol:GNB1 "Guanine nucleotide-bindin... 340 6.9e-31 1
MGI|MGI:95781 - symbol:Gnb1 "guanine nucleotide binding p... 340 6.9e-31 1
RGD|2718 - symbol:Gnb1 "guanine nucleotide binding protei... 340 6.9e-31 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 349 7.5e-31 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 287 1.1e-30 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 287 1.1e-30 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 287 1.1e-30 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 287 1.1e-30 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 287 1.1e-30 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 287 1.1e-30 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 287 1.1e-30 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 287 1.1e-30 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 287 1.1e-30 2
WARNING: Descriptions of 1745 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 1517 (539.1 bits), Expect = 1.3e-155, P = 1.3e-155
Identities = 297/497 (59%), Positives = 355/497 (71%)
Query: 88 AQNGEVRTSDSESDRDEPGPTRASAVEYXXXXXXXXXXXXXXKAKQDLLMKRRAAVLAVP 147
+QNG V+TSDS+S+ D+ +E KA QDLL+KRRAA +AVP
Sbjct: 69 SQNGGVKTSDSDSESDD------EHIEISEESKQVRERQE--KALQDLLVKRRAAAMAVP 120
Query: 148 TNDMAVRARLRRLGEPITFFGXXXXXXXXXXXXXXAKLDSEGQLDRLMKXXXXXXXXXXX 207
TND AVR RLRRLGEPIT FG + D GQLD+L+K
Sbjct: 121 TNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPKEE 180
Query: 208 XXXXXXXXMLQYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEID 267
+L+YPF+TEG K L +ARI+IAK+S+ D+PDE +D E
Sbjct: 181 VDDE----VLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETK 236
Query: 268 YALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK-FSALKG 326
+ALK + + LDC+ GDDRPL+GCS+S DG +LAT SLSGV K+W MP++ + LK
Sbjct: 237 WALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKD 296
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGT 386
H ERATDV FSPV + +AT+SADRTA+LW TDG+LL TF+GHLDRLAR+AFHPSGKYLGT
Sbjct: 297 HKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGT 356
Query: 387 TSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI 446
TS+DKTWRLWD++TG ELLLQEGHSRSVYGIAF DG+LAASCGLD+LARVWDLRTGRSI
Sbjct: 357 TSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI 416
Query: 447 LALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQ 506
L +GH+KPV ++FSPNGYHLA+GGEDN CRIWDLR RKSLY+IPAH+NL+SQVK+EPQ
Sbjct: 417 LVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQ 476
Query: 507 EGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
EGYFL T SYDM V +WSGRDF LVKSL+GHE+KV SLDI D IATVSHDR IKLW+
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536
Query: 567 TRNKGDE----HAMDVD 579
+ DE MD+D
Sbjct: 537 SSGNDDEDEEKETMDID 553
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 860 (307.8 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 166/357 (46%), Positives = 229/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ IA YS+ + P+ + ++ K + SL
Sbjct: 162 QQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLN 221
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + +LAT+ SG+ K+WS+P L+GH + F
Sbjct: 222 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFH 281
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P S ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D++WRLWD++ E+L QEGHS VY IAFH DGSLA + GLDA RVWDLRTGR I+
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 401
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + GISFSPNGYH+ATG DNTC++WDLR+R+ +Y IPAH NL++ VKFEP G
Sbjct: 402 LEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 461
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR KLW
Sbjct: 462 DFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 254 (94.5 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 68/242 (28%), Positives = 107/242 (44%)
Query: 342 HVATSSADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLW 396
H RT+++ SL LN F + DR ++ F P+ K L T + +LW
Sbjct: 198 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 257
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILA 448
V L GH+ +V I FHP +++ ASC D ++W L + +
Sbjct: 258 SVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 317
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+EGH V + + P+G L T D + R+WDL ++ + HS + + F Q+G
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH-QDG 376
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG D +VW R + + L GH ++ + P+ IAT S D K+W R
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLR 436
Query: 569 NK 570
+
Sbjct: 437 QR 438
Score = 81 (33.6 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 92 RKRARQINVSTDDSEVKACLRALGEPITLFG 122
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 858 (307.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 165/357 (46%), Positives = 229/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ IA YS+ + P+ + ++ K + SL
Sbjct: 162 QQTWYHEGPHSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLN 221
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + +LAT+ SG+ K+WS+P L+GH + F
Sbjct: 222 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 281
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P S ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTC 341
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D++WRLWD++ E+L QEGHS VY IAFH DGSLA + GLDA RVWDLRTGR I+
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 401
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + GI+FSPNGYH+ATG DNTC++WDLR+R+ +Y IPAH NL++ VKFEP G
Sbjct: 402 LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 461
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR KLW
Sbjct: 462 NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 256 (95.2 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 68/242 (28%), Positives = 109/242 (45%)
Query: 342 HVATSSADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLW 396
H RT+++ SL LN F + DR ++ F P+ K L T + +LW
Sbjct: 198 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 257
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILA 448
V L GH+ +V I FHP +++ ASC D ++W L + +
Sbjct: 258 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 317
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+EGH V +++ P+G L T D + R+WDL ++ + HS + + F Q+G
Sbjct: 318 IEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH-QDG 376
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG D +VW R + + L GH ++ ++ P+ IAT S D K+W R
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 569 NK 570
+
Sbjct: 437 QR 438
Score = 81 (33.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 92 RKRARQINVSTDDSEVKACLRALGEPITLFG 122
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 858 (307.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 165/357 (46%), Positives = 229/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ IA YS+ + P+ + ++ K + SL
Sbjct: 178 QQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLN 237
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + +LAT+ SG+ K+WS+P L+GH + F
Sbjct: 238 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 297
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P S ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 298 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 357
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D++WRLWD++ E+L QEGHS VY IAFH DGSLA + GLDA RVWDLRTGR I+
Sbjct: 358 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 417
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + GI+FSPNGYH+ATG DNTC++WDLR+R+ +Y IPAH NL++ VKFEP G
Sbjct: 418 LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 477
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR KLW
Sbjct: 478 NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 254 (94.5 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 342 HVATSSADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLW 396
H RT+++ SL LN F + DR ++ F P+ K L T + +LW
Sbjct: 214 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 273
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILA 448
V L GH+ +V I FHP +++ ASC D ++W L + +
Sbjct: 274 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 333
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+EGH V + + P+G L T D + R+WDL ++ + HS + + F Q+G
Sbjct: 334 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH-QDG 392
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG D +VW R + + L GH ++ ++ P+ IAT S D K+W R
Sbjct: 393 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 452
Query: 569 NK 570
+
Sbjct: 453 QR 454
Score = 81 (33.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 108 RKRARQINVSTDDSEVKACLRALGEPITLFG 138
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 858 (307.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 165/357 (46%), Positives = 229/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ IA YS+ + P+ + ++ K + SL
Sbjct: 163 QQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLN 222
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + +LAT+ SG+ K+WS+P L+GH + F
Sbjct: 223 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 282
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P S ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 283 PKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 342
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D++WRLWD++ E+L QEGHS VY IAFH DGSLA + GLDA RVWDLRTGR I+
Sbjct: 343 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 402
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + GI+FSPNGYH+ATG DNTC++WDLR+R+ +Y IPAH NL++ VKFEP G
Sbjct: 403 LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 462
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR KLW
Sbjct: 463 NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 254 (94.5 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 342 HVATSSADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLW 396
H RT+++ SL LN F + DR ++ F P+ K L T + +LW
Sbjct: 199 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 258
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILA 448
V L GH+ +V I FHP +++ ASC D ++W L + +
Sbjct: 259 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD 318
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+EGH V + + P+G L T D + R+WDL ++ + HS + + F Q+G
Sbjct: 319 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH-QDG 377
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG D +VW R + + L GH ++ ++ P+ IAT S D K+W R
Sbjct: 378 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 437
Query: 569 NK 570
+
Sbjct: 438 QR 439
Score = 81 (33.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 93 RKRARQINVSTDDSEVKACLRALGEPITLFG 123
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 858 (307.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 165/357 (46%), Positives = 229/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ IA YS+ + P+ + ++ K + SL
Sbjct: 180 QQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLN 239
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + +LAT+ SG+ K+WS+P L+GH + F
Sbjct: 240 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 299
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P S ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 300 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 359
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D++WRLWD++ E+L QEGHS VY IAFH DGSLA + GLDA RVWDLRTGR I+
Sbjct: 360 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 419
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + GI+FSPNGYH+ATG DNTC++WDLR+R+ +Y IPAH NL++ VKFEP G
Sbjct: 420 LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 479
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR KLW
Sbjct: 480 NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 254 (94.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 342 HVATSSADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLW 396
H RT+++ SL LN F + DR ++ F P+ K L T + +LW
Sbjct: 216 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 275
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILA 448
V L GH+ +V I FHP +++ ASC D ++W L + +
Sbjct: 276 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 335
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+EGH V + + P+G L T D + R+WDL ++ + HS + + F Q+G
Sbjct: 336 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH-QDG 394
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG D +VW R + + L GH ++ ++ P+ IAT S D K+W R
Sbjct: 395 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 454
Query: 569 NK 570
+
Sbjct: 455 QR 456
Score = 81 (33.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 110 RKRARQINVSTDDSEVKACLRALGEPITLFG 140
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 857 (306.7 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 165/357 (46%), Positives = 229/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ IA YS+ + P+ + ++ K + SL
Sbjct: 162 QQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLN 221
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + +LAT+ SG+ K+WS+P L+GH + F
Sbjct: 222 NFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFH 281
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P S ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D++WRLWD++ E+L QEGHS VY IAFH DGSLA + GLDA RVWDLRTGR I+
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 401
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + GI+FSPNGYH+ATG DNTC++WDLR+R+ +Y IPAH NL++ VKFEP G
Sbjct: 402 LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 461
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR KLW
Sbjct: 462 DFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 255 (94.8 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 342 HVATSSADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLW 396
H RT+++ SL LN F + DR ++ F P+ K L T + +LW
Sbjct: 198 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 257
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILA 448
V L GH+ +V I FHP +++ ASC D ++W L + +
Sbjct: 258 SVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 317
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+EGH V + + P+G L T D + R+WDL ++ + HS + + F Q+G
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH-QDG 376
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG D +VW R + + L GH ++ ++ P+ IAT S D K+W R
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 569 NK 570
+
Sbjct: 437 QR 438
Score = 81 (33.6 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 92 RKRARQINVSTDDSEVKACLRALGEPITLFG 122
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 845 (302.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 154/357 (43%), Positives = 232/357 (64%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L +AR+ +AKYS+ + P+ + + K + ++
Sbjct: 148 QQTWYHEGPTSLKEARLWLAKYSLPRAVKRLDAARAQKEIPESTRTIKQQELHKNLRNVN 207
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GDDRP+S C +S + LL T+S SG+ K+W +P L+GH ++F
Sbjct: 208 NFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFH 267
Query: 338 PVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTS 388
P + ++A+ +AD + +LW+ D + +GH R+AR+ +HPSG++LGTT
Sbjct: 268 PQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTC 327
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
+D +WRLWD++ E+L QEGHS+ V+ + FHPDGSLA + GLD+ ARVWDLRTGR ++
Sbjct: 328 YDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMF 387
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
LEGH+K + I+FSPNG+H+ATG DN C++WDLR+R+ +Y IPAH NL+S VKF+P +G
Sbjct: 388 LEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDG 447
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
++L+TG+YD T K+W+ + +K+L+GHE KV +D+ PD Q IAT S+DR KLW
Sbjct: 448 HYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 261 (96.9 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 362 LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
+N F + DR ++ F P+ K L T S+ +LW V + GH+ +V I+
Sbjct: 206 VNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAIS 265
Query: 419 FHPDGSLA--------ASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
FHP +L ASC D ++W L + I +EGH V +++ P+G L T
Sbjct: 266 FHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGT 325
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
D++ R+WDL ++ + HS + + F P +G TG D +VW R +
Sbjct: 326 TCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHP-DGSLAGTGGLDSFARVWDLRTGRC 384
Query: 531 VKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
V L GH ++ S++ P+ +AT S D K+W R +
Sbjct: 385 VMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQR 424
Score = 109 (43.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG+ L T + KIW+ P L GH + V SP +AT S DRT +LW
Sbjct: 445 NDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Query: 356 NTD 358
++
Sbjct: 505 MSE 507
Score = 85 (35.0 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D+ V+A LR LGEPIT FG
Sbjct: 78 RKRARQITVSTDDVEVKACLRALGEPITLFG 108
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 822 (294.4 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 153/305 (50%), Positives = 210/305 (68%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER 330
K + SL C++ GDDRPLS C +S + LLAT+ SG+ K+WS+P L+GH+
Sbjct: 215 KSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTN 274
Query: 331 ATDVTFSPVSN--------HVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSG 381
+ F P + ++A+ +AD + +LW+ + + +GH R+AR+ +HPSG
Sbjct: 275 VGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSG 334
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
++LGTT +D +WRLWD++ E+L QEGHS+ VY IAFH DGSLA + GLDA RVWDLR
Sbjct: 335 RFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLR 394
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
TGR I+ LEGH+K + G++FSPNGYH+ATG DNTC++WDLR+RK +Y IPAH NL++ V
Sbjct: 395 TGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGV 454
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
KFEP G FL+TG+YD T K+W+ + +K+L+GHE KV LDI D Q IAT S+DR
Sbjct: 455 KFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRT 514
Query: 562 IKLWS 566
KLW+
Sbjct: 515 FKLWT 519
Score = 255 (94.8 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 70/237 (29%), Positives = 110/237 (46%)
Query: 348 ADRTARLWNTDGSL--LNTFQGHL--DR-LARMAFHPSGKYLGTTSFDKTWRLWDV-DTG 401
A RT++ SL LN F + DR L+ F P+ K L T + +LW V D
Sbjct: 204 ATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCN 263
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLA--------ASCGLDALARVWDLRTGRSILALEGHV 453
+ L+ GHS +V I FHP +++ ASC D ++W L + + +EGH
Sbjct: 264 LVHTLR-GHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHS 322
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVT 513
V + + P+G L T D++ R+WDL ++ + HS + + F +G T
Sbjct: 323 MRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHT-DGSLAGT 381
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
G D +VW R + + L GH ++ L+ P+ +AT S D K+W R +
Sbjct: 382 GGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQR 438
Score = 151 (58.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV-SNH 342
G + + G ++S +G +AT S K+W + + + + H T V F P N
Sbjct: 404 GHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNF 463
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ T + D TA++W G S L T GH ++ + G+ + T S+D+T++LW +
Sbjct: 464 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 81 (33.6 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
++RA + V T+D V+A LR LGEPIT FG
Sbjct: 92 RKRARQINVSTDDSEVKACLRALGEPITLFG 122
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 799 (286.3 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 159/359 (44%), Positives = 228/359 (63%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q +Y EG +L AR+ +A YS+ + P + + KK++SL
Sbjct: 193 QATWYHEGPDSLRIARLWLADYSLPRAKDRLVRAREALEVPSAARAGRMVEMQKKLQSLA 252
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
C++ GD RP+S ++S D +LL TSS SG+ K+WS+P + L+GH V
Sbjct: 253 PLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALR 312
Query: 338 P-----VSNHVATSSA--DRTARLW--NTDGSLLNTFQGHLD-RLARMAFHPSGKYLGTT 387
P N VA +S D +LW N + S+ + GH+ R++++AFHPSG++L T
Sbjct: 313 PGVKADEENVVAMASGGHDGAVKLWGFNNEESIAD-ITGHMPHRVSKVAFHPSGRFLATA 371
Query: 388 SFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSIL 447
+D +WRLWD++ E+L QEGH++ V+ +++H DGS+ + GLDA RVWDLRTGR I+
Sbjct: 372 CYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIM 431
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
LEGH+ V G+ FSPNG+H+ATG +DNTC+IWDLR+R+ +Y IPAH+NLIS VK++ +
Sbjct: 432 FLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQEC 491
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
G FLVT SYD T K+WS + ++ +K+L GH+ KV S+DI P+ Q IAT S DR KLWS
Sbjct: 492 GSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Score = 297 (109.6 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 76/253 (30%), Positives = 116/253 (45%)
Query: 326 GHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKY- 383
G T + FS S+ + TSS +LW+ D L T +GH + +A P K
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 384 ------LGTTSFDKTWRLWDVDTGVELLLQEGHS-RSVYGIAFHPDGSLAASCGLDALAR 436
+ + D +LW + + GH V +AFHP G A+ D+ R
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 437 VWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
+WDL +L EGH KPV +S+ +G L TGG D R+WDLR + + + H
Sbjct: 379 LWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLG 438
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQS-IAT 555
+ V F P G+ + TGS D T K+W R + V ++ H ++ + + S + T
Sbjct: 439 AVFGVDFSPN-GFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVT 497
Query: 556 VSHDRWIKLWSTR 568
S+D K+WS +
Sbjct: 498 CSYDSTTKIWSNK 510
Score = 226 (84.6 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 62/204 (30%), Positives = 97/204 (47%)
Query: 376 AFHPSGKYLGTTSFDKTWRLWDV-DTGVELLLQEGHSRSVYGIAFHP------DGSLA-A 427
AF L T+S+ +LW V D ++ L+ GH+ V G+A P + +A A
Sbjct: 268 AFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLR-GHASYVGGVALRPGVKADEENVVAMA 326
Query: 428 SCGLDALARVWDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRK 486
S G D ++W SI + GH+ V ++F P+G LAT D++ R+WDL ++
Sbjct: 327 SGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKT 386
Query: 487 SLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ H+ + + + +G LVTG D +VW R + + L GH V +D
Sbjct: 387 EVLHQEGHAKPVHCLSYH-SDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDF 445
Query: 547 HPDEQSIATVSHDRWIKLWSTRNK 570
P+ IAT S D K+W R +
Sbjct: 446 SPNGFHIATGSQDNTCKIWDLRRR 469
Score = 179 (68.1 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSP-VSNHVATSSAD 349
G +S +G +AT S KIW + R Q + HT +DV + + + T S D
Sbjct: 442 GVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYD 501
Query: 350 RTARLW-NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T ++W N L T QGH +++ + P+ +Y+ TTSFD+T++LW D+
Sbjct: 502 STTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWSPDS 553
Score = 129 (50.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 289 LSGCSYSHD-GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
+S Y + G+ L T S KIWS Q L+GH + V +P S ++AT+S
Sbjct: 482 ISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTS 541
Query: 348 ADRTARLWNTD 358
DRT +LW+ D
Sbjct: 542 FDRTFKLWSPD 552
Score = 76 (31.8 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
K+RA + V T+D +++ LR+L EPI +FG
Sbjct: 122 KKRARQINVSTDDTEIKSNLRQLNEPICYFG 152
Score = 39 (18.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 9 VSTSLPVSSAAVPDSQALIST 29
V + PVSSAA + +L+ T
Sbjct: 258 VGDTRPVSSAAFSEDSSLLLT 278
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 538 (194.4 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 113/298 (37%), Positives = 176/298 (59%)
Query: 218 QYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLY 277
Q FYTEGS LL AR IA++S+ P + +K+ +
Sbjct: 129 QEEFYTEGSDELLKARKAIARFSLPRAKARVARQREESTIPLRTHIKHRKAIKEKLHNFD 188
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L ++ DRP+S C ++ DG +AT + G +++ +P L++ ++KGHT+R +++
Sbjct: 189 LYGSQIAGDRPVSICRFAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWF 248
Query: 338 PVS----NHVATSSADRTAR-------LWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLG 385
P + ++V+ S+ + + LW+ D L T +GH R+ R FHPSGKY+
Sbjct: 249 PGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIA 308
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
+ S+D TWRLWDV+T EL LQEGHSR VY +AF+ DGSL AS GLD++ RVWDLRTGR+
Sbjct: 309 SASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRT 368
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF 503
++ LEGH++ + G+ + +GY + +G D + WDLR+ K+ I AH +++S V++
Sbjct: 369 VMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRW 426
Score = 232 (86.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 66/231 (28%), Positives = 108/231 (46%)
Query: 336 FSPVSNHVATSSADRTARLW---NTDGSLLNTFQGHLDRLARMAFHP------SGKYLGT 386
F+P +AT + RL N + L + +GH DR+ +++ P S
Sbjct: 205 FAPDGQTIATGNWGGGIRLLGVPNLEEKL--SVKGHTDRVGGLSWFPGATLPESNVSESA 262
Query: 387 TSF-----DKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+F + LW +D L EGHS V FHP G AS D R+WD+
Sbjct: 263 VNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVE 322
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T + EGH + V ++F+ +G LA+GG D+ R+WDLR +++ ++ H I +
Sbjct: 323 TTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGL 382
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQS 552
+ +GY +++GS D VK W R K + H++ V+ + + +S
Sbjct: 383 DWGV-DGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWYKGSES 432
Score = 215 (80.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 70/256 (27%), Positives = 108/256 (42%)
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMA-FHPSGKY 383
K R + + P+ H+ A + +L N D L Q DR + F P G+
Sbjct: 156 KARVARQREESTIPLRTHIKHRKAIKE-KLHNFD---LYGSQIAGDRPVSICRFAPDGQT 211
Query: 384 LGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLA-----------ASCGLD 432
+ T ++ RL V E L +GH+ V G+++ P +L S G +
Sbjct: 212 IATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGGGE 271
Query: 433 ALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIP 492
+W L + + LEGH V F P+G ++A+ D T R+WD+ L +
Sbjct: 272 GNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQE 331
Query: 493 AHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQS 552
HS + V F +G L +G D +VW R + V L GH ++ LD D
Sbjct: 332 GHSREVYTVAFN-NDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDGYR 390
Query: 553 IATVSHDRWIKLWSTR 568
+ + S D W+K W R
Sbjct: 391 VLSGSGDGWVKCWDLR 406
Score = 140 (54.3 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 504 EPQE-GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWI 562
+P++ G F V+ +D V ++S D+ L+K+LSGH V S DI + Q IA+ HDR +
Sbjct: 456 QPRKSGTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTV 515
Query: 563 KLW 565
KLW
Sbjct: 516 KLW 518
Score = 122 (48.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 47/206 (22%), Positives = 84/206 (40%)
Query: 282 ESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSN 341
+ G R + ++++DG+LLA+ L + ++W + + L+GH + +
Sbjct: 330 QEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDGY 389
Query: 342 HVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAFHP---SGKYLGTTSFDKTWRLW 396
V + S D + W+ + NT H ++ + ++ S +L TT + R+
Sbjct: 390 RVLSGSGDGWVKCWDLR-QVKNTGGIGAHKSVVSDVRWYKGSESASFLPTTE-GQPGRM- 446
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
DVD G +Q S G+ S G D ++ I L GH V
Sbjct: 447 DVD-GATAPVQPRKS-----------GTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGNV 494
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDL 482
L S N +A+ G D T ++W +
Sbjct: 495 LSADISNNAQWIASCGHDRTVKLWGI 520
Score = 120 (47.3 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 24/31 (77%), Positives = 26/31 (83%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
KRRAA +AVPT+D VRARLR LGEPIT FG
Sbjct: 55 KRRAAAMAVPTDDTRVRARLRELGEPITLFG 85
Score = 100 (40.3 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP-------- 505
+PV F+P+G +ATG R+ + + + H++ + + + P
Sbjct: 198 RPVSICRFAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESN 257
Query: 506 --QEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWI 562
+ V+G + V +WS +D L +L GH +V + HP + IA+ S+D
Sbjct: 258 VSESAVNFVSGGGEGNVCLWSLDKDQPLA-TLEGHSGRVCRTEFHPSGKYIASASYDTTW 316
Query: 563 KLWSTRNKGD 572
+LW +
Sbjct: 317 RLWDVETTAE 326
Score = 66 (28.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 345 TSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+S D+ +++ D SL+ T GH + + +++ + D+T +LW ++
Sbjct: 466 SSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLWGIE 521
Score = 63 (27.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G +S V I+S L GH+ S + +A+ DRT +LW
Sbjct: 461 GTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLWGI 520
Query: 358 D 358
+
Sbjct: 521 E 521
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 697 (250.4 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 145/355 (40%), Positives = 211/355 (59%)
Query: 222 YTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLYLDCT 281
Y +GS LL AR IA YS+ + P I +++ ++ L +
Sbjct: 108 YVQGSHELLVARKKIALYSLEKAKLRLKKEREISEIPVPEIVLSGKSSIEHLQKAELMGS 167
Query: 282 ESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSN 341
+ G +RP++ +S++GN A+ S G VK+W+ L + +GHT+R + + + P+
Sbjct: 168 QIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQ 227
Query: 342 H---------VATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
+AT +AD T LW S L +GHL R+ R+AFHPSG YL + SFD
Sbjct: 228 AWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 392 TWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEG 451
TWRLWDV TGVELL+QEGHS ++ IA PDGSL +S G DA+ R+WDLR+G+SI+ L+
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE 347
Query: 452 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF-EPQEGYF 510
H++ ++ +++SPNGY LAT D+T +IWDLRK + IPAHS+L+S V++ E F
Sbjct: 348 HIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRF 407
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ T YD VK+W+ + L+KS+ GHE KV S+D + D + +DR IKLW
Sbjct: 408 IATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDR--FISSGYDRTIKLW 460
Score = 361 (132.1 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 91/276 (32%), Positives = 133/276 (48%)
Query: 306 LSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNT 364
LSG I + + + + G V FS NH A+ S ++WN+D S +
Sbjct: 150 LSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQL 209
Query: 365 FQGHLDRLARMAFHP--------SGKY-LGTTSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
F+GH DR++ + ++P S + L T + D T LW LL EGH V
Sbjct: 210 FRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVG 269
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
+AFHP G S D R+WD+ TG +L EGH + + I+ P+G +++GG D
Sbjct: 270 RVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDA 329
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
RIWDLR KS+ V+ H I + + P GY L T S D TVK+W R L ++
Sbjct: 330 IGRIWDLRSGKSIMVLDEHIRQIVAMAWSPN-GYQLATSSADDTVKIWDLRKVSLAHTIP 388
Query: 536 GHEAKVTSLDIHPD--EQSIATVSHDRWIKLWSTRN 569
H + V+ + + IAT +D +KLW+ N
Sbjct: 389 AHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLN 424
Score = 208 (78.3 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 55/214 (25%), Positives = 98/214 (45%)
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHP-------DGS 424
+A + F +G + + S+ ++W+ D E+ L GH+ V G+ ++P D
Sbjct: 175 IAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSE 234
Query: 425 -LAASCGL-DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
L + G D +W +L LEGH+ V ++F P+G +L + D T R+WD+
Sbjct: 235 QLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVT 542
L + HS I + +P +G + +G D ++W R K + L H ++
Sbjct: 295 HTGVELLMQEGHSEGIFSIACQP-DGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIV 353
Query: 543 SLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
++ P+ +AT S D +K+W R H +
Sbjct: 354 AMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTI 387
Score = 82 (33.9 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
K R L +P D VR LRR GEPIT+FG
Sbjct: 38 KDRIKALKIPYEDSKVREYLRRYGEPITYFG 68
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 143/438 (32%), Positives = 231/438 (52%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFGXXXXXXXXXXXXXXAKLDSEGQLDRLMKX 197
+RRA L +PT+D+ V+ +LR L +PI FG + + SE ++ ++
Sbjct: 66 RRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRERLRALLSTM-SEDEIAAVLHT 124
Query: 198 XXXXXXXXXXXXXXXXXXMLQYPFYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDN 257
+Y G L AR+ IA +S+
Sbjct: 125 DEVNADKADEETVT---------WYHRGPIELRMARVSIADFSLRKAKLRLDKAREEAAR 175
Query: 258 PDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR 317
P A K V+ + L ++ D RP++ C +S D + T+ SG V +W +
Sbjct: 176 PAHEKALARQEAHKWVQQINLHASQVADTRPVAFCEFSADSEHIVTAGWSGSVAVWKREQ 235
Query: 318 LQKFSALKGHTERATDVTFSP---VSN-----HVATSSADRTARLWN-TDGSLLNTFQGH 368
+ GH+ +A F P N +V + S D T LW+ + S + + H
Sbjct: 236 CAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQH 295
Query: 369 LDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAAS 428
R++++AFHP+G +L T FD TWR++D+ T ELL QEGHS+SV +AFHPDGS+A +
Sbjct: 296 PQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALT 355
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
G D RVWD+RTGR I+ L+GH K + + + PNGY + TG DN+ ++WDLR R++
Sbjct: 356 GGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNT 415
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHP 548
Y +PAH++++++V+ + G +LV+ S+D T+K+WS ++ ++ L GH+ ++ +DI P
Sbjct: 416 YTMPAHTSVVTRVRADAA-GQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISP 474
Query: 549 DEQSIATVSHDRWIKLWS 566
D Q + + + DR KLW+
Sbjct: 475 DGQWMCSSAFDRTFKLWA 492
Score = 299 (110.3 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 75/242 (30%), Positives = 119/242 (49%)
Query: 336 FSPVSNHVATSSADRTARLWNTDGSLLNT-FQGHLDRLARMAFHP--------SGKYLGT 386
FS S H+ T+ + +W + F GH + FHP S + +
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVS 271
Query: 387 TSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLRTGRS 445
S+D T LW + + E H + V +AFHP+G LA +C D+ R++DL T +
Sbjct: 272 CSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATAC-FDSTWRMYDLTTKKE 330
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP 505
+L EGH K V ++F P+G TGG D R+WD+R + + + H+ I V++ P
Sbjct: 331 LLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMP 390
Query: 506 QEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
GY ++TGS D ++KVW R + ++ H + VT + Q + + S D +K+W
Sbjct: 391 N-GYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Query: 566 ST 567
ST
Sbjct: 450 ST 451
Score = 291 (107.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 64/230 (27%), Positives = 113/230 (49%)
Query: 301 LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TD 358
+ + S G V +WS+ + L+ H +R + V F P +H+AT+ D T R+++ T
Sbjct: 269 VVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTK 328
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
LL +GH +A +AFHP G T D R+WD+ TG ++ +GH++ ++ +
Sbjct: 329 KELLYQ-EGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVE 387
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
+ P+G + D +VWDLR R+ + H V + G +L + D T +
Sbjct: 388 WMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLK 447
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+W + L + H I V P +G ++ + ++D T K+W+ D+
Sbjct: 448 MWSTTGWQPLRQLQGHDTRILCVDISP-DGQWMCSSAFDRTFKLWAQSDY 496
Score = 240 (89.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 60/208 (28%), Positives = 97/208 (46%)
Query: 377 FHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG-------SL-AAS 428
F +++ T + + +W + + + GHS FHP SL S
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVS 271
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
C D +W L I LE H + V ++F PNG+HLAT D+T R++DL +K L
Sbjct: 272 CSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKEL 331
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHP 548
HS ++ V F P +G +TG +D +VW R + + L GH ++ S++ P
Sbjct: 332 LYQEGHSKSVADVAFHP-DGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMP 390
Query: 549 DEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+ + T S D +K+W R + + + M
Sbjct: 391 NGYEMITGSSDNSMKVWDLRMRRNTYTM 418
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 474 (171.9 bits), Expect = 3.8e-55, Sum P(3) = 3.8e-55
Identities = 113/299 (37%), Positives = 164/299 (54%)
Query: 288 PLSGCSYSHDGNL--LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVAT 345
PLSG +H NL +AT+S K+W P L + + D + ++ AT
Sbjct: 320 PLSGIDGNHTKNLVNIATTSADSTCKLW--PLLNNDN--NNNNNNNND---NEEEDNDAT 372
Query: 346 SSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S + L + +GH D + R +FHP G+Y+ T+S DK+WRLWD+++G + L
Sbjct: 373 VSIETQPIL---------SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCL 423
Query: 406 L-QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
L QEGHS V GI+ DGSL A+ D L R+WDLR+GR IL +GH K V+ + +SPN
Sbjct: 424 LDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPN 483
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY--------------F 510
GY LA+ EDNT IWD+RK++ I AH++++S VKF+ Q +
Sbjct: 484 GYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNY 543
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
L T S+D +K WS + + + GH +KVTS+D+ I + S D+ K+WS N
Sbjct: 544 LATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDL--TNSKILSTSFDKTWKIWSNDN 600
Score = 344 (126.2 bits), Expect = 8.3e-40, Sum P(3) = 8.3e-40
Identities = 100/304 (32%), Positives = 150/304 (49%)
Query: 263 DDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFS 322
+ +++Y +K++++ Y ++ GDDRPLS +S DG +A S SGV K+WS+ QK
Sbjct: 246 EKDMEYTVKELKNYYSSVSQIGDDRPLSMGVFSPDGKNVAIGSWSGVSKVWSVSG-QKKQ 304
Query: 323 ALKGHTERATDVTFSPVS----NH------VATSSADRTARLWNTDGSLLNTFQGHLDRL 372
L GH++R + + + P+S NH +AT+SAD T +LW LLN + +
Sbjct: 305 ILAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKLW----PLLNNDNNNNNN- 359
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
+ D T ++T L L EGHS V +FHP G + D
Sbjct: 360 -------NNNDNEEEDNDATV---SIETQPILSL-EGHSDVVNRCSFHPCGRYITTSSND 408
Query: 433 ALARVWDLRTG-RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
R+WDL +G + +L EGH V+GIS +G LATG +D RIWDLR + +
Sbjct: 409 KSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYF 468
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
HS + V + P GY L + S D TV +W R + + H + V+ + +Q
Sbjct: 469 QGHSKQVISVDWSPN-GYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQ--KQ 525
Query: 552 SIAT 555
S T
Sbjct: 526 STQT 529
Score = 185 (70.2 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR-KSLYVIPAHSNLISQVKFE 504
IL+LEGH V SF P G ++ T D + R+WDL K L HS+ + + +
Sbjct: 380 ILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQ 439
Query: 505 PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKL 564
+G L TGS D V++W R + + GH +V S+D P+ +A+ S D + +
Sbjct: 440 -SDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVI 498
Query: 565 WSTRNK 570
W R K
Sbjct: 499 WDIRKK 504
Score = 145 (56.1 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 49/173 (28%), Positives = 74/173 (42%)
Query: 282 ESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSN 341
+ G + G S DG+LLAT S G+V+IW + + +GH+++ V +SP
Sbjct: 426 QEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGY 485
Query: 342 HVATSSADRTARLWN-----------TDGSLLNT--FQGHLDRLARMAFHPS-G--KYLG 385
+A+SS D T +W+ S+++ FQ + + S G YL
Sbjct: 486 QLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLA 545
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
T SFD + W +T L EGHS V I S S D ++W
Sbjct: 546 TCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDL--TNSKILSTSFDKTWKIW 596
Score = 80 (33.2 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 39/166 (23%), Positives = 65/166 (39%)
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP-NG 465
Q G R + F PDG A +++VW + +G+ L GH + V I++ P +G
Sbjct: 265 QIGDDRPLSMGVFSPDGKNVAIGSWSGVSKVWSV-SGQKKQILAGHSQRVSCIAYHPLSG 323
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+ N I + + P +N + + D TV +
Sbjct: 324 --IDGNHTKNLVNIATTSADSTCKLWPLLNNDNNNNNNNNNDNE---EEDNDATVSI--- 375
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
+ + + SL GH V HP + I T S+D+ +LW + G
Sbjct: 376 -ETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGG 420
Score = 72 (30.4 bits), Expect = 3.8e-55, Sum P(3) = 3.8e-55
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
K+RA + VPT D V+ +LR L EPI FG
Sbjct: 64 KKRAKQVIVPTIDNLVKLKLRELLEPIILFG 94
Score = 52 (23.4 bits), Expect = 3.8e-55, Sum P(3) = 3.8e-55
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 221 FYTEGSKALLDARIDIAKYSI 241
F TEG++ L ARI+I+ YS+
Sbjct: 141 FLTEGTEELKTARINISIYSL 161
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 485 (175.8 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 114/346 (32%), Positives = 185/346 (53%)
Query: 221 FYTEGSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLYLDC 280
FY+ G LL+AR++IAKYS+ P + ++++ L
Sbjct: 141 FYSRGGPDLLNARVEIAKYSLPRAKQRVAFQKTEAKIPQRTHMRARKQVKERLQGFELQG 200
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSP-- 338
+++ R +S S +G +AT + G VK++S+P L + L+GHT + + + + P
Sbjct: 201 SQTAGQRHISITRISPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGA 260
Query: 339 ---VSN------HVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTS 388
SN ++AT A+ LW+ + + L T GH R+ R+ FHPSG++L + S
Sbjct: 261 TLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASAS 320
Query: 389 FDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA 448
D +WRLWDV+ ELLLQEGHSR V+ ++F+ DGSL AS G D++ R+WDLRTGR+I+
Sbjct: 321 EDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMI 380
Query: 449 LEGH----VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVK-F 503
L+GH +KP+ + + +G+ + + D + WD+RK + + AH++ +S ++ F
Sbjct: 381 LDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVSDMRWF 440
Query: 504 E----PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ P +G L + SG F LV S H+ + S D
Sbjct: 441 KGLDGPLDGVPLGVDEKGQAMPKKSGT-F-LVSSGFDHKVNIYSAD 484
Score = 264 (98.0 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 81/279 (29%), Positives = 128/279 (45%)
Query: 301 LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS 360
LAT G V +WS+ + + L GHT+R V F P +A++S D + RLW+ +
Sbjct: 274 LATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKR 333
Query: 361 L-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
L +GH + ++F+ G L + D R+WD+ TG +++ +GH
Sbjct: 334 TELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHM-------- 385
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPNGYHLATGGEDNTC 477
DG + LD W G +L+ +G +K + G +T
Sbjct: 386 --DGHIKPIYALD-----WG-SDGHRVLSASADGWIK-----CWDVRKVQRTGGVGAHTS 432
Query: 478 RIWDLRKRKSLYV----IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
+ D+R K L +P + Q + G FLV+ +D V ++S D+ LV+S
Sbjct: 433 AVSDMRWFKGLDGPLDGVPLGVDEKGQA-MPKKSGTFLVSSGFDHKVNIYSADDWALVQS 491
Query: 534 LSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
LSGH V S+D+ D + I + HDR +KLW RN G+
Sbjct: 492 LSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWG-RNDGE 529
Score = 114 (45.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP----QEGYF------L 511
SPNG +ATG +++ + + H+N +S + + P QE L
Sbjct: 215 SPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNL 274
Query: 512 VTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
TG + V +WS +D L +LSGH +V +D HP + +A+ S D +LW +
Sbjct: 275 ATGGAEGQVNLWSLSQDTPLA-TLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKR 333
Score = 101 (40.6 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 138 KRRAAVLAVPTNDMAVRARLRRLGEPITFFG 168
K+ A + VPTND+ VRARLR +GEPIT FG
Sbjct: 59 KKIADAIPVPTNDVRVRARLRDMGEPITLFG 89
Score = 72 (30.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN- 356
G L +S V I+S +L GHT V S + + DRT +LW
Sbjct: 466 GTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWGR 525
Query: 357 TDG 359
DG
Sbjct: 526 NDG 528
Score = 67 (28.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG +L ++ FD ++ D + GH+ V + DG S G D ++W
Sbjct: 465 SGTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWG 524
Query: 440 LRTGRSI 446
G +
Sbjct: 525 RNDGEGV 531
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 115/307 (37%), Positives = 182/307 (59%)
Query: 270 LKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSA-LKGHT 328
L+++ +L L ++ +P+S S S D ++AT S +G +++ + LQ + L H
Sbjct: 159 LQRMANLELAGSQLVSTKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHV 218
Query: 329 ERATDVTFSPVSNHVATSSAD----RTARLWNTDGSL--LNTFQGHLDRLARMAFHPSGK 382
+ + + P SN+ S A+ + + N +G L L GH R++ + +HPSGK
Sbjct: 219 GKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGK 278
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT 442
++G+ S D TWRLWD T ELLLQEGH + V+ ++F DGSL S G+D+L+ +WD+R+
Sbjct: 279 FIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRS 338
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS--LYVIPAHSNLISQ 500
G ++ L GH KP+ +++SPNGY +ATGG D +WD+RKR L I AH N+++Q
Sbjct: 339 GSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQ 398
Query: 501 VKFEPQEG-YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V+F ++G LV+ YD + V+S + + SL+GH K+ SLDI + + + D
Sbjct: 399 VRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWD 458
Query: 560 RWIKLWS 566
R IKLW+
Sbjct: 459 RSIKLWN 465
Score = 163 (62.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 408 EGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLRT---GRSILA-LEGHVKPVLGISFS 462
+ H + I +HPD + SC D L + + G +L L GH + + + +
Sbjct: 215 DSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYH 274
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
P+G + + D T R+WD + L + H + + F+ +G + +G D +
Sbjct: 275 PSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQC-DGSLVCSGGMDSLSML 333
Query: 523 WSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
W R V +L+GH + ++ P+ +AT D I +W R K DE
Sbjct: 334 WDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIR-KRDE 383
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 93/135 (68%), Positives = 106/135 (78%)
Query: 422 DGSLA----ASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
DG+L AS G D+LARVWDLRT R+IL +GH+K VL + FSPNGYHLA+GGEDN C
Sbjct: 137 DGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQC 196
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
RIWDLR RK LY+IPAH NL+SQVK+EPQE YFL T S+DM V +WSGRDF LVKSL GH
Sbjct: 197 RIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGH 256
Query: 538 EAKVTSLDIHPDEQS 552
E+KV SLDI D S
Sbjct: 257 ESKVASLDIAVDSSS 271
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 101/280 (36%), Positives = 143/280 (51%)
Query: 225 GSKALLDARIDIAKYSIXXXXXXXXXXXXXXDNPDESIDDEIDYALKKVESLYLDCTESG 284
G L +ARI+I K I ++PDE + E ALK + + L ++ G
Sbjct: 2 GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61
Query: 285 DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL-QKFSALKGHTERATDVTFSPVSNH- 342
DDRPL+GCS S DG +L T SLSGV K+W +P++ K LKGH E TDV FS V +
Sbjct: 62 DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121
Query: 343 VATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
+AT+S DRT ++W TDG+LL TF+ SG FD R+WD+ T
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFKAS-----------SG-------FDSLARVWDLRTAR 163
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
+L+ +GH + V + F P+G AS G D R+WDLR + + + HV V + +
Sbjct: 164 NILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYE 223
Query: 463 PNG-YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
P Y LAT D IW R + + H + ++ +
Sbjct: 224 PQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
Score = 161 (61.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
A+ G D+ R+WDLR +++ + H + V F P GY L +G D ++W R
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPN-GYHLASGGEDNQCRIWDLRMR 204
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQS-IATVSHDRWIKLWSTRN 569
KL+ + H V+ + P E+ +AT SHD + +WS R+
Sbjct: 205 KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRD 246
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 483 (175.1 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 101/274 (36%), Positives = 154/274 (56%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S DG LA+ S VK+W+ + L+GH++ V FSP +A+SS+D T
Sbjct: 925 AFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTI 984
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+LWN T G L TF+GH + +AF P GK+L + S D T +LWD+ T E HS
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
RSV+ +AF PD AS LD+ ++WD TG LEGH + V ++FSP+G LA+
Sbjct: 1045 RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
D T ++W+ + + S+ + V F P +G L +G YD T+K+W +L+
Sbjct: 1105 SYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLWDSATGELL 1163
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
++L GH ++ S+ PD + +A+ S+D+ KLW
Sbjct: 1164 QTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW 1197
Score = 464 (168.4 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 99/279 (35%), Positives = 148/279 (53%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ +S DG L + S VKIW + L GH+ + FSP +A+ S
Sbjct: 752 PVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGS 811
Query: 348 ADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW++ G LL TF+GH + +AF P GK L + S D T ++WD+ TG
Sbjct: 812 YDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT 871
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ HS+SV +AF PDG L AS LD+ +VW+ TG +LEG V ++FSP+G
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK 931
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
LA+G E NT ++W+ + L + HS + V F P +G L + S D T+K+W+
Sbjct: 932 KLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP-DGKQLASSSSDTTIKLWNST 990
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+L ++ GH+ + ++ PD + + + S D IKLW
Sbjct: 991 TGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Score = 452 (164.2 bits), Expect = 2.1e-41, P = 2.1e-41
Identities = 97/287 (33%), Positives = 149/287 (51%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + +++ DG LA++S +KIW + + L H++ V FSP
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Query: 341 NHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+A+SS D T ++WN G L + +G + +AF P GK L + S T +LW+
Sbjct: 889 KLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPA 948
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
TG L EGHS+SV +AF PDG AS D ++W+ TG +GH + +
Sbjct: 949 TGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAV 1008
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
+FSP+G HL +G +DNT ++WDL + + HS + V F P + L + S D T
Sbjct: 1009 AFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDST 1067
Query: 520 VKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+K+W +L ++L GH V S+ PD + +A+ S+D IKLW+
Sbjct: 1068 IKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN 1114
Score = 434 (157.8 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 96/291 (32%), Positives = 150/291 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T + + ++S DG LLA+SSL +K+W+ + +L+G + V FS
Sbjct: 868 LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFS 927
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P +A+ S T +LWN G LL T +GH + +AF P GK L ++S D T +LW
Sbjct: 928 PDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
+ TG +GH + +AF PDG S D ++WDL T +LE H + V
Sbjct: 988 NSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSV 1047
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
++FSP+ LA+ D+T ++WD + + HS + V F P +G L + SY
Sbjct: 1048 HAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSY 1106
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
D T+K+W+ +L ++L+G V S+ PD + +A+ +D IKLW +
Sbjct: 1107 DGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDS 1157
Score = 430 (156.4 bits), Expect = 4.7e-39, P = 4.7e-39
Identities = 106/319 (33%), Positives = 162/319 (50%)
Query: 263 DDEIDYALKKVESLYLDCTESGDDRPL----SGCSYSHDGNL---LATSSLSGVVKIWS- 314
D E+ L L+ + PL SG +S +G++ + +LSG WS
Sbjct: 676 DSELSKFLYDARRFVLNNRHLAETAPLQLYSSGLMFSPEGSITRRIFNYNLSG----WSQ 731
Query: 315 MPRL-QKFSA----LKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGH 368
+P++ Q +SA L+ H V FSP + + S D T ++W+ G LL T GH
Sbjct: 732 LPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGH 791
Query: 369 LDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAAS 428
+ +AF P GK L + S+D T LWD TG L EGH S++ +AF PDG AS
Sbjct: 792 SGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELAS 851
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D+ ++WDL TG L+ H + V ++FSP+G LA+ D+T ++W+ +
Sbjct: 852 ASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQ 911
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHP 548
+ S + V F P +G L +GS TVK+W+ +L+++L GH V S+ P
Sbjct: 912 QSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 549 DEQSIATVSHDRWIKLWST 567
D + +A+ S D IKLW++
Sbjct: 971 DGKQLASSSSDTTIKLWNS 989
Score = 420 (152.9 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 92/288 (31%), Positives = 141/288 (48%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++S DG LLA+ S + +W + +GH V F+P
Sbjct: 787 TLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDG 846
Query: 341 NHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+A++S D T ++W+ G L T H + +AF P GK L ++S D T ++W+
Sbjct: 847 KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
TG EG S V +AF PDG AS ++W+ TG + LEGH + V +
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSV 966
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
+FSP+G LA+ D T ++W+ + H I V F P +G LV+GS D T
Sbjct: 967 AFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP-DGKHLVSGSDDNT 1025
Query: 520 VKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+K+W +L +SL H V ++ PD++ +A+ S D IKLW +
Sbjct: 1026 IKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDS 1073
Score = 413 (150.4 bits), Expect = 3.1e-37, P = 3.1e-37
Identities = 94/290 (32%), Positives = 145/290 (50%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T G D + ++S DG L + S +K+W + + +L+ H+ V FS
Sbjct: 994 LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFS 1053
Query: 338 PVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P +A+SS D T +LW++ G L T +GH + + F P GK L + S+D T +LW
Sbjct: 1054 PDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW 1113
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
+ TG G S V +AF PDG AS D+ ++WD TG + LEGH +
Sbjct: 1114 NPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRI 1173
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
+ FSP+G LA+G D T ++WD + L + HS + V F P +G L + SY
Sbjct: 1174 QSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP-DGKLLASSSY 1232
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS-HDRWIKLW 565
T+K+W +L+++L+ + S+ PD +A+V D K+W
Sbjct: 1233 GETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT--KIW 1280
Score = 382 (139.5 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 88/258 (34%), Positives = 126/258 (48%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
R + ++S D LA+SSL +K+W + L+GH++ VTFSP +A++
Sbjct: 1045 RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 347 SADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T +LWN G L T G D + +AF P GK L + +D T +LWD TG L
Sbjct: 1105 SYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQ 1164
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
EGHS + + F PDG L AS D A++WD TG + EGH K V ++FSP+G
Sbjct: 1165 TLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDG 1224
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
LA+ T ++WD + L + V F P +D K+W
Sbjct: 1225 KLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD--TKIWDP 1282
Query: 526 RDFKLVKSLSGHEAKVTS 543
+L+++L GH V S
Sbjct: 1283 ATGELLQALKGHSKWVWS 1300
Score = 277 (102.6 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/178 (34%), Positives = 93/178 (52%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + ++S DG LA+ +K+W + L+GH++R V FS
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P +A+ S D+TA+LW+ G LL F+GH + +AF P GK L ++S+ +T +LW
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK 454
D TG L S +AF PDG+ AS + ++WD TG + AL+GH K
Sbjct: 1240 DPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD-TKIWDPATGELLQALKGHSK 1296
Score = 172 (65.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 44/139 (31%), Positives = 64/139 (46%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L E DR + +S DG LLA+ S K+W + +GH++ V FS
Sbjct: 1163 LQTLEGHSDR-IQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFS 1221
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P +A+SS T +LW+ G LL T + +AF P G L + T ++W
Sbjct: 1222 PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIW 1280
Query: 397 DVDTGVELLLQEGHSRSVY 415
D TG L +GHS+ V+
Sbjct: 1281 DPATGELLQALKGHSKWVW 1299
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 99/300 (33%), Positives = 154/300 (51%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-----PRLQKFSALKGHTERATDVT 335
T + +R +S +S DG LLA++S ++ +++ P + GH +DV
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 336 FSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWR 394
FS + + ++S D+T +LW+ + GSL+ T GH + + F+P + + SFD+T R
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 395 LWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHV 453
+WDV TG L + HS V + F+ DGSL S D L R+WD TG + L +
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL---ISQVKFEPQEGYF 510
PV + FSPNG + G DNT R+W++ K L H N IS F G
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA-FSVTNGKR 257
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
+V+GS D V +W KL++ L GH V ++ HP E IA+ S D+ +++W+ + +
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 219 (82.2 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 60/229 (26%), Positives = 105/229 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S D+ L VE+ L T G +++ N++ + S V+IW + +
Sbjct: 88 SASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC 147
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTF-QGHLDRLARMAFH 378
L H++ T V F+ + + +SS D R+W++ G + T ++ + F
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFS 207
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI--AFH-PDGSLAASCGLDALA 435
P+GK++ + D T RLW++ + L GH + Y I AF +G S D
Sbjct: 208 PNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 436 RVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+W+L + + + LEGH + V+ ++ P +A+G D T RIW +K
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 404 (147.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 94/294 (31%), Positives = 149/294 (50%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L CT G + +S +S G L TSS VKIW+M + L GH D+ +S
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 338 PVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V ++S D+T +++ S + T +GH + + F+P + + SFD++ R+W
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG+ + HS V ++F+ DGSL AS D L R+WD G+ I L + P
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV--KFEPQEGYFLVT 513
V + FSPNG ++ D+T ++WD K K+L H N + F G ++++
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT--VSHDRWIKLW 565
GS D + +W+ + ++V+ L GH V + D HP + IA+ + D I +W
Sbjct: 319 GSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 295 (108.9 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 66/212 (31%), Positives = 110/212 (51%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
L+ T +GH ++ F P GKYLGT+S DKT ++W++D + GH V IA+
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D S D +++++ T R L+GH V +F+P + +G D + RIW
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE-A 539
D++ + +PAHS+ +S V F ++G + +GSYD V++W + + +K+L E
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
V + P+ + I + D +KLW +KG
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDF-SKG 288
Score = 235 (87.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 58/259 (22%), Positives = 122/259 (47%)
Query: 273 VESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERAT 332
++ + + T +G ++ ++S D + ++S +KI+ + + LKGH
Sbjct: 116 MDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVF 175
Query: 333 DVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
F+P S+ V + S D + R+W+ G + T H D ++ ++F+ G + + S+D
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 392 TWRLWDVDTG--VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
R+WD G ++ L+ + + + + F P+G + LD+ ++WD G+++
Sbjct: 236 LVRIWDTANGQCIKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY 294
Query: 450 EGHV--KPVLGISFS-PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQ 506
GH K + +FS G + +G ED IW+L+ R+ + + H+ + P
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPV 354
Query: 507 EGYFLVTGSY--DMTVKVW 523
+ + +G+ D + +W
Sbjct: 355 QN-IIASGALEPDNKIHIW 372
Score = 225 (84.3 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 60/227 (26%), Positives = 103/227 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S D+ + ++ + + T G + + C+++ +L+ + S V+IW +
Sbjct: 146 SASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC 205
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTF-QGHLDRLARMAFH 378
L H++ + V+F+ + +A+ S D R+W+T +G + T +A + F
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH---PDGSLAASCGLDALA 435
P+GKY+ ++ D T +LWD G L GH S Y I + G S D
Sbjct: 266 PNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKI 325
Query: 436 RVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGG--EDNTCRIW 480
+W+L+T + LEGH +PVL P +A+G DN IW
Sbjct: 326 YIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 39 (18.8 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 7 NPVSTSLPVSSAAVPDSQA 25
NP T P +SA P+ A
Sbjct: 48 NPTGTPAPGASAQTPNPNA 66
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 404 (147.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 94/294 (31%), Positives = 149/294 (50%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L CT G + +S +S G L TSS VKIW+M + L GH D+ +S
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 338 PVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V ++S D+T +++ S + T +GH + + F+P + + SFD++ R+W
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG+ + HS V ++F+ DGSL AS D L R+WD G+ I L + P
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV--KFEPQEGYFLVT 513
V + FSPNG ++ D+T ++WD K K+L H N + F G ++++
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT--VSHDRWIKLW 565
GS D + +W+ + ++V+ L GH V + D HP + IA+ + D I +W
Sbjct: 319 GSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 295 (108.9 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 66/212 (31%), Positives = 110/212 (51%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
L+ T +GH ++ F P GKYLGT+S DKT ++W++D + GH V IA+
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D S D +++++ T R L+GH V +F+P + +G D + RIW
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE-A 539
D++ + +PAHS+ +S V F ++G + +GSYD V++W + + +K+L E
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
V + P+ + I + D +KLW +KG
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDF-SKG 288
Score = 235 (87.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 58/259 (22%), Positives = 122/259 (47%)
Query: 273 VESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERAT 332
++ + + T +G ++ ++S D + ++S +KI+ + + LKGH
Sbjct: 116 MDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVF 175
Query: 333 DVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
F+P S+ V + S D + R+W+ G + T H D ++ ++F+ G + + S+D
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 392 TWRLWDVDTG--VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
R+WD G ++ L+ + + + + F P+G + LD+ ++WD G+++
Sbjct: 236 LVRIWDTANGQCIKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY 294
Query: 450 EGHV--KPVLGISFS-PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQ 506
GH K + +FS G + +G ED IW+L+ R+ + + H+ + P
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPV 354
Query: 507 EGYFLVTGSY--DMTVKVW 523
+ + +G+ D + +W
Sbjct: 355 QN-IIASGALEPDNKIHIW 372
Score = 225 (84.3 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 60/227 (26%), Positives = 103/227 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S D+ + ++ + + T G + + C+++ +L+ + S V+IW +
Sbjct: 146 SASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC 205
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTF-QGHLDRLARMAFH 378
L H++ + V+F+ + +A+ S D R+W+T +G + T +A + F
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH---PDGSLAASCGLDALA 435
P+GKY+ ++ D T +LWD G L GH S Y I + G S D
Sbjct: 266 PNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKI 325
Query: 436 RVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGG--EDNTCRIW 480
+W+L+T + LEGH +PVL P +A+G DN IW
Sbjct: 326 YIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 39 (18.8 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 7 NPVSTSLPVSSAAVPDSQA 25
NP T P +SA P+ A
Sbjct: 48 NPTGTPAPGASAQTPNPNA 66
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 131 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 251 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 306
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 12 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 131 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 191 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 249
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 250 SGSEDNLVYIWNLQTK 265
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 38 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 217 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 276 SGSEDNLVYIWNLQTK 291
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 38 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 217 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 276 SGSEDNLVYIWNLQTK 291
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 38 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 217 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 276 SGSEDNLVYIWNLQTK 291
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 38 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 217 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 276 SGSEDNLVYIWNLQTK 291
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/256 (30%), Positives = 131/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 38 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 217 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 276 SGSEDNLVYIWNLQTK 291
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 98/296 (33%), Positives = 153/296 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
SN + ++S D+T ++W+ + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V S HP E IA+ + +D+ IKLW +
Sbjct: 277 GSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 78/256 (30%), Positives = 130/256 (50%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 38 KFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT ++WDV +G L +GHS V+ F+P +L S D R+W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D++TG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ + H+ + + + + I
Sbjct: 217 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIV 275
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ + K
Sbjct: 276 SGSEDNLVYIWNLQTK 291
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 427 (155.4 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/304 (32%), Positives = 147/304 (48%)
Query: 277 YLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR--LQKFSALKGHTERATDV 334
+L T G + + +SHD LLA++S G VKIW LQ+ LKGH + V
Sbjct: 296 FLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRM--LKGHNDSVRSV 353
Query: 335 TFSPVSNHVATSSADRTARLWNTDGSLL-NTFQGHLDRLARMAFHPSGKYLGTTSFDKTW 393
FS S +A+ S DRT R+W T LL +TF+ H D + ++F + L + S
Sbjct: 354 VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNV 413
Query: 394 RLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHV 453
++WD TG + EGH V ++F PD L AS D ++W TG LEGH
Sbjct: 414 KIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN 473
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVT 513
V + FS + +A+ +D T +IWD + +H N + V F + L +
Sbjct: 474 DWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFS-HDSRLLAS 532
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
S DMTVK+W L +L GH+ +V S+ PD + +A+ S D +K+W +
Sbjct: 533 ASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQ 592
Query: 574 HAMD 577
H D
Sbjct: 593 HTFD 596
Score = 415 (151.1 bits), Expect = 3.1e-37, P = 3.1e-37
Identities = 94/295 (31%), Positives = 145/295 (49%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G DR + S+SHD LLA++S G VKIW + L+GH E V FS S +
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 344 ATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
A++S D T ++W+T G+L +GH D + + F + + + S D+T R+W+ TG+
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
E H SV ++F D AS ++WD RTG LEGH V +SFS
Sbjct: 381 LRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFS 440
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
P+ LA+ +D T +IW + H++ + V F + + + S DMTVK+
Sbjct: 441 PDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS-HDSRLIASASDDMTVKI 499
Query: 523 WSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMD 577
W L +L H+ V S+ D + +A+ S D +K+W T E+ ++
Sbjct: 500 WDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE 554
Score = 364 (133.2 bits), Expect = 8.2e-32, P = 8.2e-32
Identities = 84/276 (30%), Positives = 135/276 (48%)
Query: 297 DGNLLATSSLSGV----VKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
D A ++SG+ +++++ L + KGH V+FS S +A++S D T
Sbjct: 228 DSYRFALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTV 287
Query: 353 RLWNTDGSLL-NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
++W+T S L NT +GH + + + F + L + S D T ++WD TG + +GH+
Sbjct: 288 KIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHN 347
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
SV + F D L AS D R+W+ TG E H V+ +SF+ + LA+
Sbjct: 348 DSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASA 407
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
+ +IWD R V+ H + ++ V F P + L + S D TVK+W L
Sbjct: 408 SDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQ 466
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
++L GH V S+ D + IA+ S D +K+W T
Sbjct: 467 RTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT 502
Score = 325 (119.5 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 80/287 (27%), Positives = 126/287 (43%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+SHD L+A+ S V+IW + H + V+F+ S +A++S +
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 354 LWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSR 412
+W+T GSL N +GH D + ++F P + L + S D+T ++W TG EGH+
Sbjct: 415 IWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHND 474
Query: 413 SVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGG 472
V + F D L AS D ++WD T LE H V + FS + LA+
Sbjct: 475 WVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASAS 534
Query: 473 EDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
+D T +IWD + H + ++ V F P + L + S D TVK+W +
Sbjct: 535 DDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYAATGTVQH 593
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD 579
+ G SL +A+ D +K+W H D+D
Sbjct: 594 TFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLD 640
Score = 165 (63.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 42/141 (29%), Positives = 71/141 (50%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S D++ + ++ L D + +SHD LLA++S VKIW
Sbjct: 490 SASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSL 549
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLA-RMAFH 378
+ L+GH +R V+FSP S +A++S D T ++W G++ +TF G R+A +AF
Sbjct: 550 ENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGS-GRVAISLAFS 608
Query: 379 PSGKYLGTTSFDKTWRLWDVD 399
+ L + D T ++WD++
Sbjct: 609 HTSNLLASAMDDGTVKIWDME 629
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 419 (152.6 bits), Expect = 3.3e-38, P = 3.3e-38
Identities = 87/217 (40%), Positives = 122/217 (56%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G P+ GCS+S D L + S ++WSM + KGH DV+FSP +
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 344 ATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
AT+S DRTARLW T+ S L F GHL + FHP+ YL T S DK+ RLW++ TG
Sbjct: 737 ATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK 796
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
+ + GH +Y +AF PDG L A+ G D +WDL TG+ + ++GH K V + FS
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS 856
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
+G LA+G D T R+WD++K + + S+LI+
Sbjct: 857 CDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLIN 893
Score = 330 (121.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 74/226 (32%), Positives = 118/226 (52%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N L + S S K+ + +F GH+ +FSP S ++ + S D TARLW+ +
Sbjct: 650 NNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSME 709
Query: 359 G-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
S L ++GH + ++F P G Y T S D+T RLW + L + GH +
Sbjct: 710 TMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTV 769
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
FHP+ + A+ D AR+W+++TG+ + GH P+ ++FSP+G LAT GED +
Sbjct: 770 RFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSV 829
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+WDL K + + H+ + + F +G L +GS D TV++W
Sbjct: 830 ILWDLSTGKKVKKMDGHTKCVYSLDFSC-DGSILASGSSDCTVRLW 874
Score = 298 (110.0 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 73/248 (29%), Positives = 117/248 (47%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPS 380
SA+ G + + +N++ + S+ + +L S TF GH + +F P
Sbjct: 631 SAMNGSGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPD 690
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
+YL + S D T RLW ++T L+ +GH+ V+ ++F P G A+ D AR+W
Sbjct: 691 SQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTT 750
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ 500
+ GH+ + F PN +LATG D + R+W+++ K + + H I
Sbjct: 751 NHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYT 810
Query: 501 VKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
V F P +G L T D +V +W K VK + GH V SLD D +A+ S D
Sbjct: 811 VAFSP-DGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDC 869
Query: 561 WIKLWSTR 568
++LW +
Sbjct: 870 TVRLWDVK 877
Score = 287 (106.1 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 77/284 (27%), Positives = 126/284 (44%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ S D L+A VKIW++ +++ L+ ++ SN
Sbjct: 561 LNTTDISKDAQLVAGGFSDSSVKIWNLKEMKE-QRLQQQQQQQQQQQQQQNSNQNGYFEN 619
Query: 349 DRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
A ++ S +N G+ + + + G++S + ++ + L
Sbjct: 620 GNFASSASSASSAMNG-SGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFL-- 676
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GHS VYG +F PD SC D AR+W + T +++ +GH PV +SFSP G++
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
AT D T R+W L + H + + V+F P Y L TGS D + ++W +
Sbjct: 737 ATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINY-LATGSNDKSARLWEIQTG 795
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW--STRNK 570
K V+ GH A + ++ PD + +AT D + LW ST K
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKK 839
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 95/305 (31%), Positives = 161/305 (52%)
Query: 269 ALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFS-ALKGH 327
++ + + L T G + +S +S DG LA++S +KIW KF L+GH
Sbjct: 29 SIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD-GKFERTLEGH 87
Query: 328 TERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGT 386
E +D+ +S S + ++S D+T ++W+ + G ++ T +GH + + ++F+P + +
Sbjct: 88 KEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVS 147
Query: 387 TSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI 446
SFD+ R+WDV+TG + HS V G+ F+ DG+L S D R+WD TG+ +
Sbjct: 148 GSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Query: 447 LALEGHV-KPVLGISFSPNGYHLATGGEDNTCRIWDLRK-RKSLYVIPAHSNLISQV--K 502
+ K V + FSPNG + G DNT R+W +K L H N +
Sbjct: 208 NTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFST 267
Query: 503 FEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT--VSHDR 560
F G ++VTGS D + +++ + ++V++L+GHE V ++ HP E IA+ + DR
Sbjct: 268 FSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDR 327
Query: 561 WIKLW 565
+K+W
Sbjct: 328 SVKIW 332
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 69/222 (31%), Positives = 119/222 (53%)
Query: 350 RTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+T + T +L T +GHL ++ + F P GK+L + S DKT ++W G E
Sbjct: 26 QTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE 85
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH + IA+ D L S D ++WD+ +G+ + L+GH + V G+SF+P +
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+G D RIWD+ + +I AHS+ ++ V F ++G +V+GSYD TV++W
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDTTTG 204
Query: 529 KLVKSLSGHEAK-VTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+L+ ++S + K V+ + P+ + + + D ++LWS N
Sbjct: 205 QLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNN 246
Score = 203 (76.5 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 62/228 (27%), Positives = 103/228 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S D+ + VES + T G + G S++ NL+ + S V+IW + +
Sbjct: 105 SASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGEC 164
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDR-LARMAFH 378
+ H++ T V F+ V + S D T R+W+T G LLNT + ++ + F
Sbjct: 165 TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFS 224
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGI--AFHPD-GSLAASCGLDAL 434
P+GK++ + D T RLW + + L GH Y I F G + D L
Sbjct: 225 PNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNL 284
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGG--EDNTCRIW 480
+++L+T + L GH VL ++ P +A+G +D + +IW
Sbjct: 285 IYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 93/291 (31%), Positives = 146/291 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + +S +S G L TSS VKIW+M L L GH D +S S
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ T+S D+T +++ + T +GH + + F+P + + SFD++ R+WDV
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKPVLG 458
TG+ + HS V ++F+ DGSL S D L R+WD G+ + L + PV
Sbjct: 194 TGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAF 253
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVTGSY 516
+ FSPNG ++ + DNT ++WD K K+L H N F G ++++GS
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSE 313
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT--VSHDRWIKLW 565
D + VW+ + ++V+SL GH V + D HP + IA+ + D I++W
Sbjct: 314 DCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 73/219 (33%), Positives = 114/219 (52%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPS 380
S ++GHT+ + V FSP + TSSAD+T ++WN +D S T GH + A+
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
K + T S DKT ++++V T +GH+ V+ F+P SL S D R+WD+
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDV 192
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL-IS 499
RTG + L H PV +SF+ +G + +G D RIWD + + + N ++
Sbjct: 193 RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVA 252
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE 538
VKF P G ++++ + D T+K+W K +K GHE
Sbjct: 253 FVKFSPN-GKYILSSNLDNTLKLWDFGKGKTLKQYQGHE 290
Score = 292 (107.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 69/234 (29%), Positives = 121/234 (51%)
Query: 337 SPVSNHVATSSADRTARLWNTDGS---LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTW 393
+P V ++A T++ G+ L++T +GH ++ + F P GK+LGT+S DKT
Sbjct: 44 NPPITAVPEATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTV 103
Query: 394 RLWDV-DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGH 452
++W++ D E L GH V A+ D + D +++++ T + L+GH
Sbjct: 104 KIWNMSDLSCERTLT-GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGH 162
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
V +F+P + +G D + RIWD+R + +PAHS+ +S V F ++G +
Sbjct: 163 TNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFN-RDGSLIT 221
Query: 513 TGSYDMTVKVWSGRDFKLVKSLSGHE-AKVTSLDIHPDEQSIATVSHDRWIKLW 565
+GSYD V++W + + VK+L E V + P+ + I + + D +KLW
Sbjct: 222 SGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Score = 264 (98.0 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 64/256 (25%), Positives = 125/256 (48%)
Query: 278 LDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVT 335
L C T +G ++ ++S D + T+S +KI+ +P ++ LKGHT
Sbjct: 111 LSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCN 170
Query: 336 FSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWR 394
F+P S+ V + S D + R+W+ G + T H D ++ ++F+ G + + S+D R
Sbjct: 171 FNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVR 230
Query: 395 LWDVDTG--VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGH 452
+WD G V+ L+ + + + + F P+G S LD ++WD G+++ +GH
Sbjct: 231 IWDTANGQCVKTLVDDENPPVAF-VKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGH 289
Query: 453 V--KPVLGISFS-PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
K + +FS G + +G ED +W+L+ ++ + + H+ + P +
Sbjct: 290 ENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQN- 348
Query: 510 FLVTGSY--DMTVKVW 523
+ +G+ D T+++W
Sbjct: 349 MIASGALEPDNTIRIW 364
Score = 223 (83.6 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 61/223 (27%), Positives = 105/223 (47%)
Query: 267 DYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D LK +V ++ + T G + C+++ +L+ + S V+IW + L
Sbjct: 142 DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTL 201
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTF-QGHLDRLARMAFHPSGK 382
H++ + V+F+ + + + S D R+W+T +G + T +A + F P+GK
Sbjct: 202 PAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK 261
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH---PDGSLAASCGLDALARVWD 439
Y+ +++ D T +LWD G L +GH + Y I + G S D VW+
Sbjct: 262 YILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGG--EDNTCRIW 480
L+T + +LEGH + V+ P +A+G DNT RIW
Sbjct: 322 LQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 216 (81.1 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
EGH++S+ + F P G + D ++W++ L GH V ++S +
Sbjct: 76 EGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS 135
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ T +D T +I+++ K + H+N + F PQ +V+GS+D +V++W R
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS-LVVSGSFDESVRIWDVRT 194
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
VK+L H V+++ + D I + S+D +++W T N
Sbjct: 195 GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTAN 236
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 96/296 (32%), Positives = 149/296 (50%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + +S +S +G LA+SS ++KIW + + GH +DV +S
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S + + S D+T ++W + G L T +GH + + F+P + + SFD++ R+W
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKP 455
DV TG L HS V + F+ DGSL S D L R+WD +G+ + L + P
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVT 513
V + FSPNG ++ DNT ++WD K K L H N F G ++V+
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 514 GSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
GS D V +W+ + ++V+ L GH V HP E IA+ + +D+ IKLW +
Sbjct: 304 GSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 79/256 (30%), Positives = 133/256 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH 378
KF+ L GHT+ + V FSP +A+SSAD+ ++W DG T GH ++ +A+
Sbjct: 65 KFT-LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
+ L + S DKT ++W++ TG L +GHS V+ F+P +L S D R+W
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
D+RTG+ + L H PV + F+ +G + + D CRIWD + L + N
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH---PDEQSIA 554
+S VKF P G +++ + D T+K+W K +K+ +GH+ + + + + I
Sbjct: 244 VSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 302
Query: 555 TVSHDRWIKLWSTRNK 570
+ S D + +W+ ++K
Sbjct: 303 SGSEDNMVYIWNLQSK 318
Score = 291 (107.5 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 66/228 (28%), Positives = 119/228 (52%)
Query: 345 TSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
+S++++++ + +L T GH ++ + F P+G++L ++S DK ++W G
Sbjct: 48 SSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE 107
Query: 405 LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
GH + +A+ D L S D +VW+L TG+S+ L+GH V +F+P
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
+ +G D + RIWD+R K L +PAHS+ +S V F ++G +V+ SYD ++W
Sbjct: 168 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWD 226
Query: 525 GRDFKLVKSLSGHE-AKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
+ +K+L + V+ + P+ + I + D +KLW +KG
Sbjct: 227 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKG 273
Score = 124 (48.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 285 DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDV--TFSPVSNH 342
D+ P+S +S +G + ++L +K+W + + GH + FS
Sbjct: 240 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 299
Query: 343 -VATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSF--DKTWRLWDV 398
+ + S D +WN ++ QGH D + A HP+ + + + DKT +LW
Sbjct: 300 WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
Query: 399 DT 400
DT
Sbjct: 360 DT 361
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 99/285 (34%), Positives = 139/285 (48%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S DG LLA+ S +K+W L+GH+ V FSP +A+ S+D T
Sbjct: 48 TFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTI 107
Query: 353 RLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+LWN+ SL +T +GH DR+ +AF P+G+ LW+ G EGHS
Sbjct: 108 KLWNSASDSLKHTMEGHSDRVESVAFSPNGQ------------LWNPAIGSLKHTIEGHS 155
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PDG L AS + ++WD T L GH VL + FSP+G LA+G
Sbjct: 156 DWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASG 215
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
D T ++WD + + HSN I + F P G L +GS D T+K+W
Sbjct: 216 SNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPN-GQLLASGSSDATIKLWDTATGSFR 274
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+L GH V S+ PD Q + + S D IKLW +H+M
Sbjct: 275 HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSM 319
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 91/265 (34%), Positives = 132/265 (49%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P LQ L+GH++ VTFSP +A+ S D T +LW+ G L T +GH
Sbjct: 30 WG-PELQ---TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSS 85
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ +AF P+G+ L + S D T +LW+ + EGHS V +AF P+G L
Sbjct: 86 VQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL------ 139
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
W+ G +EGH VL ++FSP+G LA+G + T ++WD + +
Sbjct: 140 ------WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
HSN + + F P +G L +GS D T+K+W L +L GH K+ SL P+ Q
Sbjct: 194 GGHSNWVLPLVFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ 252
Query: 552 SIATVSHDRWIKLWSTRNKGDEHAM 576
+A+ S D IKLW T H +
Sbjct: 253 LLASGSSDATIKLWDTATGSFRHTL 277
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 96/303 (31%), Positives = 150/303 (49%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++S +G LLA+ S +K+W+ ++GH++R V FSP
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP-- 135
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+LWN GSL +T +GH D + +AF P G+ L + S +KT +LWD
Sbjct: 136 ----------NGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSA 185
Query: 400 T-GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
T G++ L GHS V + F PDG L AS DA ++WD +G LEGH +
Sbjct: 186 TCGLKHTLG-GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIES 244
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDM 518
++FSPNG LA+G D T ++WD + + HS+++ V F P + L +GS D
Sbjct: 245 LAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDN 303
Query: 519 TVKVWSGRDFKLVKSLS--GHEAKVT-SLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
T+K+W L S+ G + S+++ ++ T S W + +R+ G + A
Sbjct: 304 TIKLWDPATGILKHSMRTPGIVRSIEFSIELPQLITNLGTFSIQAWHTGYPSRSSGKKTA 363
Query: 576 MDV 578
+ V
Sbjct: 364 VSV 366
Score = 293 (108.2 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 71/219 (32%), Positives = 107/219 (48%)
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
G L T +GH D + + F P G+ L + S D T +LWD +G EGHS SV +A
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
F P+G L AS D ++W+ + +EGH V ++FSPNG +
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------Q 138
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE 538
+W+ + I HS+ + V F P +G L +GS + T+K+W L +L GH
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 539 AKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMD 577
V L PD + +A+ S+D IKLW + +H ++
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE 236
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 79/283 (27%), Positives = 137/283 (48%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS-PVSNHVATS 346
PL+ + + G+ T S K+W ++ + L+GH + F+ P + +AT
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 347 SADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D+T +LW+ + G +TF+GH + ++F+P + T S D T +LWD+ G E+
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVY 213
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
GHS + ++F+ G + D VWD TGR + L GH + SF+ +
Sbjct: 214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC 273
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+ TG D TC++WD K + + H + I F+ G + T S D T +++S
Sbjct: 274 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFD-YTGKLIATASADGTARIFSA 332
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
K + L GHE +++ + +P + T S D+ ++W +
Sbjct: 333 ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 85/269 (31%), Positives = 138/269 (51%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G+ +AT S K+WS+ + + +GHT ++F+P S VAT S D TA+LW+
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 358 -DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+G + T +GH + ++F+ SG + T SFD T +WD DTG ++ + GH +
Sbjct: 207 QNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISS 266
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+F+ D SL + +D ++WD G+ + L GH +L F G +AT D T
Sbjct: 267 ASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
RI+ RK + + H IS++ F PQ G L+TGS D T ++W + + ++ L G
Sbjct: 327 ARIFSAATRKCIAKLEGHEGEISKISFNPQ-GNHLLTGSSDKTARIWDAQTGQCLQVLEG 385
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ S + + T S D ++W
Sbjct: 386 HTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 80/252 (31%), Positives = 133/252 (52%)
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH- 378
F LK H T+V + + T S DRT +LW+T G LNT +GH + + +AF+
Sbjct: 85 FKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNN 144
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P G + T SFDKT +LW V+TG GH+ + ++F+P +L A+ +D A++W
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D++ G + L GH ++ +SF+ +G + TG D+T +WD + + ++ H I
Sbjct: 205 DIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEI 264
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S F + ++TGS D T K+W + K V +L+GH+ ++ + IAT S
Sbjct: 265 SSASFN-WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 559 DRWIKLWSTRNK 570
D +++S +
Sbjct: 324 DGTARIFSAATR 335
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 73/232 (31%), Positives = 115/232 (49%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
S++ L+AT S+ K+W + ++ L+GH+ ++F+ + + T S D T
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Query: 353 RLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+W+ D G +N GH ++ +F+ + T S DKT +LWD G + GH
Sbjct: 244 VVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD 303
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
+ F G L A+ D AR++ T + I LEGH + ISF+P G HL TG
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTG 363
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
D T RIWD + + L V+ H++ I F +G ++TGS D T ++W
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNTCRIW 414
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 72/210 (34%), Positives = 108/210 (51%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
L + H+ L +A + SG T S+D+T +LWD +G EL EGH VY IAF+
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 421 -PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
P G A+ D ++W + TG+ GH ++ +SF+P +ATG D T ++
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD++ + +Y + HS I + F G ++TGS+D TV VW + V L GH A
Sbjct: 204 WDIQNGEEVYTLRGHSAEIISLSFNTS-GDRIITGSFDHTVVVWDADTGRKVNILIGHCA 262
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+++S + D I T S D+ KLW N
Sbjct: 263 EISSASFNWDCSLILTGSMDKTCKLWDATN 292
Score = 299 (110.3 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 63/201 (31%), Positives = 101/201 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + S++ G+ + T S V +W +K + L GH + +F+
Sbjct: 214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC 273
Query: 341 NHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ + T S D+T +LW+ T+G + T GH D + F +GK + T S D T R++
Sbjct: 274 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
T + EGH + I+F+P G+ + D AR+WD +TG+ + LEGH +
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSC 393
Query: 460 SFSPNGYHLATGGEDNTCRIW 480
+F+ G + TG +DNTCRIW
Sbjct: 394 AFNYKGNIVITGSKDNTCRIW 414
Score = 234 (87.4 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 52/169 (30%), Positives = 87/169 (51%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER 330
+KV L C E +S S++ D +L+ T S+ K+W + + L GH +
Sbjct: 252 RKVNILIGHCAE------ISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE 305
Query: 331 ATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSF 389
D F +AT+SAD TAR+++ + +GH +++++F+P G +L T S
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSS 365
Query: 390 DKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
DKT R+WD TG L + EGH+ ++ AF+ G++ + D R+W
Sbjct: 366 DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 353 (129.3 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 101/315 (32%), Positives = 157/315 (49%)
Query: 281 TESG-DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV 339
T SG + +SG S++++ N L + G + IW++ E + +
Sbjct: 149 TPSGFHNEKISGLSWNNNDNQLVSGGNEGTINIWNV------------NENNNN---NNN 193
Query: 340 SNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+N+ + D+ L ++ +++ Q H DR+ + FHP + +TSFD+TW+LWD++
Sbjct: 194 NNNNNNNEKDQNGLLLSSP--IVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLN 251
Query: 400 --TGVE-----LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGH 452
+G L+ QEGHS+ ++ HPDG L S GLD + +WDLR+GRSI+ L+ H
Sbjct: 252 KLSGQRDDLQCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKH 311
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS------LYVIPAHSNLISQVKFEPQ 506
+ V + +SPNGY TG D + +IWDLRK ++ LY IPAH+ LI+ VKF Q
Sbjct: 312 MAGVYCLDWSPNGYQFVTGSGDCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKFYHQ 371
Query: 507 EGYFLVTGSYDMTVKVWSGRDFKLVKS-LSGHEAKVTSLDIHPDEQSIATV-SHDRWIKL 564
S D+ K +D + + L G E + + S D WIK+
Sbjct: 372 --------SRDIMQKQQQQQDQQQDQDHLLGSEFNDGKFLVSCSYDGDVNIWSSDNWIKI 423
Query: 565 WSTRNKGDEHAMDVD 579
S R D+ M D
Sbjct: 424 KSLRGHTDK-VMSCD 437
Score = 225 (84.3 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNT--------DGSLLNTFQGHLDRLA 373
S + H +R T F P++N + ++S D+T +LW+ D L +GH +
Sbjct: 215 SIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIF 274
Query: 374 RMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDA 433
HP G + D +WD+ +G ++ + H VY + + P+G + D
Sbjct: 275 TGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDC 334
Query: 434 LARVWDLR------TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS 487
++WDLR + + ++ H K + + F YH + + D ++ +
Sbjct: 335 SLKIWDLRKLENNNSNNELYSIPAHTKLITDVKF----YHQSRDIMQKQQQQQDQQQDQD 390
Query: 488 LYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH 547
+L+ E +G FLV+ SYD V +WS ++ +KSL GH KV S DI+
Sbjct: 391 --------HLLGS---EFNDGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDKVMSCDIN 439
Query: 548 PDEQSIATVSHDRWIKLW 565
+ I + DR IKLW
Sbjct: 440 STGKWIVSSGWDRSIKLW 457
Score = 105 (42.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 285 DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
D L G ++ DG L + S G V IWS K +L+GHT++ + +
Sbjct: 388 DQDHLLGSEFN-DGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDKVMSCDINSTGKWIV 446
Query: 345 TSSADRTARLW 355
+S DR+ +LW
Sbjct: 447 SSGWDRSIKLW 457
Score = 59 (25.8 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 221 FYTEGSKALLDARIDIAKYSI 241
FYT G K L D R+++ YS+
Sbjct: 27 FYTPGPKELYDVRLEVLNYSL 47
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 353 (129.3 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 101/315 (32%), Positives = 157/315 (49%)
Query: 281 TESG-DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV 339
T SG + +SG S++++ N L + G + IW++ E + +
Sbjct: 149 TPSGFHNEKISGLSWNNNDNQLVSGGNEGTINIWNV------------NENNNN---NNN 193
Query: 340 SNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+N+ + D+ L ++ +++ Q H DR+ + FHP + +TSFD+TW+LWD++
Sbjct: 194 NNNNNNNEKDQNGLLLSSP--IVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLN 251
Query: 400 --TGVE-----LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGH 452
+G L+ QEGHS+ ++ HPDG L S GLD + +WDLR+GRSI+ L+ H
Sbjct: 252 KLSGQRDDLQCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKH 311
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS------LYVIPAHSNLISQVKFEPQ 506
+ V + +SPNGY TG D + +IWDLRK ++ LY IPAH+ LI+ VKF Q
Sbjct: 312 MAGVYCLDWSPNGYQFVTGSGDCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKFYHQ 371
Query: 507 EGYFLVTGSYDMTVKVWSGRDFKLVKS-LSGHEAKVTSLDIHPDEQSIATV-SHDRWIKL 564
S D+ K +D + + L G E + + S D WIK+
Sbjct: 372 --------SRDIMQKQQQQQDQQQDQDHLLGSEFNDGKFLVSCSYDGDVNIWSSDNWIKI 423
Query: 565 WSTRNKGDEHAMDVD 579
S R D+ M D
Sbjct: 424 KSLRGHTDK-VMSCD 437
Score = 225 (84.3 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 68/258 (26%), Positives = 115/258 (44%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNT--------DGSLLNTFQGHLDRLA 373
S + H +R T F P++N + ++S D+T +LW+ D L +GH +
Sbjct: 215 SIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIF 274
Query: 374 RMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDA 433
HP G + D +WD+ +G ++ + H VY + + P+G + D
Sbjct: 275 TGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDC 334
Query: 434 LARVWDLR------TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS 487
++WDLR + + ++ H K + + F YH + + D ++ +
Sbjct: 335 SLKIWDLRKLENNNSNNELYSIPAHTKLITDVKF----YHQSRDIMQKQQQQQDQQQDQD 390
Query: 488 LYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH 547
+L+ E +G FLV+ SYD V +WS ++ +KSL GH KV S DI+
Sbjct: 391 --------HLLGS---EFNDGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDKVMSCDIN 439
Query: 548 PDEQSIATVSHDRWIKLW 565
+ I + DR IKLW
Sbjct: 440 STGKWIVSSGWDRSIKLW 457
Score = 105 (42.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 285 DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
D L G ++ DG L + S G V IWS K +L+GHT++ + +
Sbjct: 388 DQDHLLGSEFN-DGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDKVMSCDINSTGKWIV 446
Query: 345 TSSADRTARLW 355
+S DR+ +LW
Sbjct: 447 SSGWDRSIKLW 457
Score = 59 (25.8 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 221 FYTEGSKALLDARIDIAKYSI 241
FYT G K L D R+++ YS+
Sbjct: 27 FYTPGPKELYDVRLEVLNYSL 47
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 385 (140.6 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 80/203 (39%), Positives = 119/203 (58%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G P+ G S+S D L + S V++WS+ + KGHT+ DV FSP+ ++
Sbjct: 515 GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYF 574
Query: 344 ATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
T+S D+TARLW TD L F GH++ + + FHP+ Y+ T S DKT R+WDV TG
Sbjct: 575 VTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGN 634
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL-GISF 461
+ + GH+ SV +A PDG AS G D + VWD+ +GR + ++ GH + L ++F
Sbjct: 635 CVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAF 694
Query: 462 SPNGYHLATGGEDNTCRIWDLRK 484
S +G L +G DN+ R+WD++K
Sbjct: 695 SRDGTVLVSGCADNSVRVWDVKK 717
Score = 312 (114.9 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 80/273 (29%), Positives = 133/273 (48%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALK--------------GHTERATDVTFSPV 339
++ D L+A +K+WS+ S LK GH+ V+FSP
Sbjct: 469 FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPD 528
Query: 340 SNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
+ ++ + S D+T RLW+ D + L +++GH + + F P G Y T S D+T RLW
Sbjct: 529 NKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWAT 588
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
D L + GH V + FHP+ + + D R+WD+ TG + GH V
Sbjct: 589 DHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNC 648
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYD 517
++ SP+G LA+GGED +WD+ + L + H+ + + F ++G LV+G D
Sbjct: 649 LAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFS-RDGTVLVSGCAD 707
Query: 518 MTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+V+VW D K + +G E + + +++ +E
Sbjct: 708 NSVRVW---DVKKNTNDAGPEPEAFNNNVNGNE 737
Score = 290 (107.1 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 77/258 (29%), Positives = 122/258 (47%)
Query: 332 TDVTFSPVSNHVATSSADRTARLWNTDG----SLL---------NTFQ--GHLDRLARMA 376
T + F+ S VA D +LW+ DG S+L NT + GH + ++
Sbjct: 465 TCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVS 524
Query: 377 FHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALAR 436
F P KYL + S DKT RLW +DT L+ +GH++ V+ + F P G + D AR
Sbjct: 525 FSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTAR 584
Query: 437 VWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
+W + GH+ V + F PN ++ TG D TCR+WD+ + V H+N
Sbjct: 585 LWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTN 644
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH-EAKVTSLDIHPDEQSIAT 555
++ + P +G +L +G D + VW + +KS+ GH A + SL D + +
Sbjct: 645 SVNCLAVSP-DGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVS 703
Query: 556 VSHDRWIKLWSTR-NKGD 572
D +++W + N D
Sbjct: 704 GCADNSVRVWDVKKNTND 721
Score = 39 (18.8 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 4 EEENPVSTSLPVSSAAVPDSQALISTIE 31
++++PV SLP+ D + +I +E
Sbjct: 407 DQDSPVRESLPLPLKDANDIKKMIIQVE 434
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 77/283 (27%), Positives = 137/283 (48%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS-PVSNHVATS 346
PL+ + + G+ T S K+W ++ L+GH + F+ P + +AT
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 347 SADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D+T +LW+ + G +TF+GH + ++F+P + T S D T +LWD+ +G E+
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVF 213
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
GHS + ++F+ G+ + D VW+ TGR + L GH + F+ +
Sbjct: 214 TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC 273
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+ TG D TC++WD K + + H + I F+ G + T S D T +++S
Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFD-YTGKLIATASADGTARIFSA 332
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ V L GHE +++ + +P + T S D+ ++W +
Sbjct: 333 ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 84/269 (31%), Positives = 134/269 (49%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G+ +AT S K+WS+ + + +GHT ++F+P S VAT S D TA+LW+
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
G + T GH + ++F+ SG + T SFD T +W+ DTG ++ GH +
Sbjct: 207 QSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISS 266
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
F+ D SL + +D ++WD G+ + L GH +L F G +AT D T
Sbjct: 267 AVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
RI+ R+ + + H IS++ F PQ G L+TGS D T ++W + + ++ L G
Sbjct: 327 ARIFSAATRECVTKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARIWDAQTGQCLQVLEG 385
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ S + I T S D ++W
Sbjct: 386 HTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 86/285 (30%), Positives = 144/285 (50%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
PL S S LL L + S + F L+ H T+V + + T S
Sbjct: 53 PLITASRSDQVKLLI-QRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGS 111
Query: 348 ADRTARLWNT-DGSLLNTFQGHLDRLARMAFH-PSGKYLGTTSFDKTWRLWDVDTGVELL 405
DRT +LW+T G L+T +GH + + +AF+ P G + T SFDKT +LW V+TG
Sbjct: 112 YDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH 171
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
GH+ + ++F+P +L A+ +D A++WD+++G + L GH ++ +SF+ +G
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 231
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+ TG D+T +W+ + +Y + H IS F + ++TGS D T K+W
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDA 290
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
+ K V +L+GH+ ++ + IAT S D +++S +
Sbjct: 291 VNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Score = 299 (110.3 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 63/201 (31%), Positives = 99/201 (49%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T +G + S++ GN + T S V +W +K L GH + F+
Sbjct: 214 TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC 273
Query: 341 NHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ + T S D+T +LW+ +G + T GH D + F +GK + T S D T R++
Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
T + EGH + I+F+P G+ + D AR+WD +TG+ + LEGH +
Sbjct: 334 TRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSC 393
Query: 460 SFSPNGYHLATGGEDNTCRIW 480
+F+ G + TG +DNTCRIW
Sbjct: 394 AFNYKGDIIITGSKDNTCRIW 414
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 93/297 (31%), Positives = 154/297 (51%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G +S +S +G LA+S+ ++ IW L GH+ +DV +S
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90
Query: 338 PVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S+ + ++S D+T ++W+ G L T +GH D + F+P + + SFD++ ++W
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVK 454
+V TG L HS + + F+ +GSL S D L R+WD +G+ + LA EG+
Sbjct: 151 EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGN-P 209
Query: 455 PVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLV 512
PV + FSPNG ++ T DNT ++WD + + L H N F ++V
Sbjct: 210 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVV 269
Query: 513 TGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS--HDRWIKLWST 567
+GS D V +W+ + ++V+ L GH V S HP + IA+ + +D+ IK+WS+
Sbjct: 270 SGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSS 326
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 73/253 (28%), Positives = 129/253 (50%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L GH+ + V FSP +A+S+AD +W DG+ T GH ++ +A+
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT 442
L + S DKT ++WD+ +G L +GHS V+ F+P +L S D ++W+++T
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL-ISQV 501
G+ + L H P+ ++F+ NG + +G D CRIWD + L + N +S V
Sbjct: 155 GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFV 214
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAK----VTSLDIHPDEQSIATVS 557
KF P G +++T + D T+K+W + +K+ +GH+ + S + + + + S
Sbjct: 215 KFSPN-GKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSV-TGRKWVVSGS 272
Query: 558 HDRWIKLWSTRNK 570
D + +W+ + K
Sbjct: 273 EDNMVYIWNLQTK 285
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 78/283 (27%), Positives = 134/283 (47%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS-PVSNHVATS 346
PL+ + + G+ T S K+W ++ L+GH + F+ P + +AT
Sbjct: 94 PLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 347 SADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D+T +LW+ + G +TF+GH + ++F+P + T S D T +LWD+ +G E++
Sbjct: 154 SFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVV 213
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
GH + ++F G + D VWD TGR + L GH + FS +
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC 273
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+ TG D TC +WD K + + H + I F+ G + T S D T +V++
Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD-YTGKLIATASADGTARVYNA 332
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
K + L GHE +++ + +P + T S D+ ++W +
Sbjct: 333 TTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQ 375
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 84/269 (31%), Positives = 132/269 (49%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G+ +AT S K+WS + + +GHT ++F+P S VAT S D TA+LW+
Sbjct: 147 GDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI 206
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
G + T GHL + ++F SG + T SFD T +WD TG ++ GH +
Sbjct: 207 QSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISS 266
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
F D SL + +D +WD +G+ + L GH +L F G +AT D T
Sbjct: 267 ALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+++ RK + + H IS++ F PQ G L+TGS D T ++W + + ++ L G
Sbjct: 327 ARVYNATTRKCITKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARIWDVQTGQCLQVLEG 385
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ S + + T S D ++W
Sbjct: 386 HTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 73/252 (28%), Positives = 132/252 (52%)
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH- 378
F L+ H T+V + + T S DRT ++W+T G L+T +GH + + +AF+
Sbjct: 85 FKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P G + T SFDKT +LW +TG GH+ + ++F+P ++ A+ +D A++W
Sbjct: 145 PYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLW 204
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+++G ++ L GH+ ++ +SF +G + TG D+T +WD + ++ + H I
Sbjct: 205 DIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEI 264
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S F + ++TGS D T +W K V +L+GH+ ++ + IAT S
Sbjct: 265 SSALFS-WDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 559 DRWIKLWSTRNK 570
D ++++ +
Sbjct: 324 DGTARVYNATTR 335
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 70/232 (30%), Positives = 111/232 (47%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
S++ ++AT S+ K+W + ++ L GH ++F + + T S D T
Sbjct: 184 SFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTV 243
Query: 353 RLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+W+ G ++T GH ++ F + T S DKT LWD +G + GH
Sbjct: 244 VVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHD 303
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
+ F G L A+ D ARV++ T + I LEGH + ISF+P G L TG
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTG 363
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
D T RIWD++ + L V+ H++ I F +G ++TGS D + ++W
Sbjct: 364 SSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIW 414
Score = 302 (111.4 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 68/212 (32%), Positives = 107/212 (50%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
L + H+ L +A + +G T S+D+T ++WD +G EL EGH VY IAF+
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 421 -PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
P G A+ D ++W TG+ GH ++ +SF+P +ATG D T ++
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD++ + + + H I + F+ G ++TGS+D TV VW + V +L GH A
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTS-GDRIITGSFDHTVVVWDASTGRKVHTLIGHCA 262
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLW-STRNK 570
+++S D I T S D+ LW +T K
Sbjct: 263 EISSALFSWDCSLILTGSMDKTCMLWDATSGK 294
Score = 293 (108.2 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 63/201 (31%), Positives = 99/201 (49%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T +G + S+ G+ + T S V +W +K L GH + FS
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC 273
Query: 341 NHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ + T S D+T LW+ T G + T GH D + F +GK + T S D T R+++
Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNAT 333
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
T + EGH + I+F+P G+ + D AR+WD++TG+ + LEGH +
Sbjct: 334 TRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSC 393
Query: 460 SFSPNGYHLATGGEDNTCRIW 480
+F+ G + TG +DN+CRIW
Sbjct: 394 AFNYKGNIVITGSKDNSCRIW 414
Score = 220 (82.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 51/168 (30%), Positives = 77/168 (45%)
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS-PNGYHL 468
H + +A + GS + D +VWD +G + LEGH V I+F+ P G +
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
ATG D TC++W K + H+ I + F PQ + TGS D T K+W +
Sbjct: 151 ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTV-VATGSMDTTAKLWDIQSG 209
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+ V +L+GH A++ SL I T S D + +W H +
Sbjct: 210 EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL 257
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 88/269 (32%), Positives = 136/269 (50%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G+ +AT S K+WS + F +GHT + F+P S VAT S D TA+LW+
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDV 206
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + + F+ +G L T SFD T LWDV +G ++ + GH +
Sbjct: 207 ESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISC 266
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F+ D SL A+ LD +VWD G+ + L GH VL + F+ G +AT D T
Sbjct: 267 VQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGT 326
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R++ + L + H IS+V F Q G ++T S D T +VW + ++ L G
Sbjct: 327 SRVFSTDTFQCLCQLEGHKGEISKVCFNAQ-GSRVLTASVDKTSRVWCVKTGACLQVLEG 385
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ S + + +I T S D ++W
Sbjct: 386 HSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 81/249 (32%), Positives = 133/249 (53%)
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFH- 378
F AL+ H T+V F+ + T S DRT ++W+T G L+T +GH + + +AF+
Sbjct: 85 FRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P G + T SFDKT +LW +TG GH+ + +AF+P +L A+ +D A++W
Sbjct: 145 PYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ +G + L GH ++ + F+ G L TG D+T +WD+ + ++V+ H I
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S V+F + + T S D + KVW + + +L GH +V + + Q IAT S
Sbjct: 265 SCVQFN-WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASA 323
Query: 559 DRWIKLWST 567
D +++ST
Sbjct: 324 DGTSRVFST 332
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 78/283 (27%), Positives = 139/283 (49%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS-PVSNHVATS 346
PL+ +++ G+ T S KIW ++ L+GH + F+ P + VAT
Sbjct: 94 PLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATG 153
Query: 347 SADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D+T +LW+ + G TF+GH + +AF+P + T S D T +LWDV++G E+
Sbjct: 154 SFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVS 213
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
GH + + F+ G + D A +WD+ +GR + L GH + + F+ +
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDC 273
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+AT D +C++WD + L + H++ + V F G + T S D T +V+S
Sbjct: 274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFN-YTGQLIATASADGTSRVFST 332
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
F+ + L GH+ +++ + + + T S D+ ++W +
Sbjct: 333 DTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVK 375
Score = 314 (115.6 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
L Q H+ L +AF+ SG T S+D+T ++WD +G EL EGH VY IAF+
Sbjct: 84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 421 -PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
P G A+ D ++W TG+ GH ++ ++F+P +ATG D T ++
Sbjct: 144 NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKL 203
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + + + H I + F G LVTGS+D T +W + V LSGH
Sbjct: 204 WDVESGEEVSTLAGHFAEIISLCFNTT-GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRG 262
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLW 565
+++ + + D IAT S D+ K+W
Sbjct: 263 EISCVQFNWDCSLIATASLDKSCKVW 288
Score = 306 (112.8 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 66/232 (28%), Positives = 112/232 (48%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
+++ L+AT S+ K+W + ++ S L GH + F+ + + T S D TA
Sbjct: 184 AFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTA 243
Query: 353 RLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
LW+ G ++ GH ++ + F+ + T S DK+ ++WD + G L GH+
Sbjct: 244 ILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHN 303
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V + F+ G L A+ D +RV+ T + + LEGH + + F+ G + T
Sbjct: 304 DEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTA 363
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
D T R+W ++ L V+ HS+ I F EG ++TGS D T ++W
Sbjct: 364 SVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN-YEGDTIITGSKDNTCRIW 414
Score = 295 (108.9 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/193 (32%), Positives = 102/193 (52%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
+S C ++ G+ L T S +W +P +K L GH + V F+ + +AT+S
Sbjct: 223 ISLC-FNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASL 281
Query: 349 DRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D++ ++W+ +G L T GH D + + F+ +G+ + T S D T R++ DT L
Sbjct: 282 DKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQL 341
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
EGH + + F+ GS + +D +RVW ++TG + LEGH + +F+ G
Sbjct: 342 EGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDT 401
Query: 468 LATGGEDNTCRIW 480
+ TG +DNTCRIW
Sbjct: 402 IITGSKDNTCRIW 414
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 53/157 (33%), Positives = 84/157 (53%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG +S ++ D +L+AT+SL K+W Q + L GH + DV F+
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQL 317
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+AT+SAD T+R+++TD L +GH ++++ F+ G + T S DKT R+W V TG
Sbjct: 318 IATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG 377
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
L + EGHS ++ AF+ +G + D R+W
Sbjct: 378 ACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS-PNGY 466
+ H + +AF+ GS + D ++WD +G + LEGH V I+F+ P G
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ATG D TC++W K Y H+ I + F PQ + TGS D T K+W
Sbjct: 149 KVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDVE 207
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+ V +L+GH A++ SL + + T S D LW + H +
Sbjct: 208 SGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Score = 221 (82.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 42/126 (33%), Positives = 66/126 (52%)
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
AL+ H+ P+ ++F+ +G TG D TC+IWD + L+ + H N++ + F
Sbjct: 87 ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
G + TGS+D T K+WS K + GH A++ L +P +AT S D KLW
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDV 206
Query: 568 RNKGDE 573
+ G+E
Sbjct: 207 ES-GEE 211
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 382 (139.5 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 79/194 (40%), Positives = 114/194 (58%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
S+S D L + S V++WSM + KGH DV+FSP+ ++ AT+S D+TA
Sbjct: 532 SFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTA 591
Query: 353 RLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
RLW+ D L F GHL+ + ++FHP+G Y+ T S DKT R+WDV TG + L GH+
Sbjct: 592 RLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHT 651
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK-PVLGISFSPNGYHLAT 470
V IA PDG ++ D + VWD+ TG+ + + GH K + +S+S G L +
Sbjct: 652 APVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLIS 711
Query: 471 GGEDNTCRIWDLRK 484
GG D+T R+WDL+K
Sbjct: 712 GGADHTVRVWDLKK 725
Score = 337 (123.7 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 71/202 (35%), Positives = 108/202 (53%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGK 382
L GH+ +FSP + ++ + S D+T RLW+ D + L +++GH + ++F P G
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT 442
Y T S D+T RLW D L + GH V ++FHP+G + D R+WD+ T
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHS-NLISQV 501
G S+ GH PV+ I+ P+G L+TG ED +WD+ K L + H N I +
Sbjct: 641 GDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSL 700
Query: 502 KFEPQEGYFLVTGSYDMTVKVW 523
+ +EG L++G D TV+VW
Sbjct: 701 SYS-KEGNVLISGGADHTVRVW 721
Score = 291 (107.5 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 66/217 (30%), Positives = 106/217 (48%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T GH + +F P KYL + S DKT RLW +DT L+ +GH+ V+ ++F P G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 424 SLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
A+ D AR+W + GH+ V +SF PNG ++ TG D TCR+WD+
Sbjct: 580 HYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 484 KRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH-EAKVT 542
S+ + H+ + + P +G +L TGS D + VW K +K + GH + +
Sbjct: 640 TGDSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY 698
Query: 543 SLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD 579
SL + + + D +++W + E + + D
Sbjct: 699 SLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPD 735
Score = 241 (89.9 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 53/177 (29%), Positives = 88/177 (49%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G + P+ S+S G+ AT+S ++WS + GH V+F P +V
Sbjct: 565 GHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYV 624
Query: 344 ATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
T S+D+T R+W+ G + F GH + +A P G++L T S D +WD+ TG
Sbjct: 625 FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGK 684
Query: 403 ELLLQEGHSRS-VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
L GH ++ +Y +++ +G++ S G D RVWDL+ + + E +P +G
Sbjct: 685 RLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPD-EPFIG 740
Score = 49 (22.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 19/84 (22%), Positives = 33/84 (39%)
Query: 264 DEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP--RLQKF 321
D + AL V +Y T ++ +S +S D + A +KIWS+ L
Sbjct: 448 DNLQLALPSV-CMY---TFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNP 503
Query: 322 SALKGHTERATDVTFSPVSNHVAT 345
+ + ++ D T + H T
Sbjct: 504 NIALNNNDKDEDPTCKTLVGHSGT 527
Score = 44 (20.5 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 336 FSPVSNHVATSSADRTARLWNTDGSLLN 363
FS A D ++W+ DGS LN
Sbjct: 474 FSDDCRIAAAGFQDSYIKIWSLDGSSLN 501
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 376 (137.4 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 87/272 (31%), Positives = 137/272 (50%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
V WS P LQ AL+GH V++S S +A++S DRT ++W+T+ GSL +T +G
Sbjct: 281 VANHWS-PCLQ---ALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H D + + F + L + S D T ++WD TG EGH V + F D L A
Sbjct: 337 HSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 395
Query: 428 SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS 487
S D+ ++WD TG LEGH V + FS + LA+ +D+T +IWD
Sbjct: 396 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 488 LYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH 547
+ + H + + V F + L + S D TV++W +L GH + VTS+
Sbjct: 456 QHTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFS 514
Query: 548 PDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD 579
D + +A+ S+D+ +++W + +H D+D
Sbjct: 515 HDSRLLASASNDQTVRIWDIEARSLQHTFDLD 546
Score = 366 (133.9 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 84/241 (34%), Positives = 122/241 (50%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G + + SYSHD LLA++S VKIW L+GH++ V FS S +
Sbjct: 294 GHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLL 353
Query: 344 ATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
A++S D T ++W+T GSL +T +GH D + + F + L + S D T ++WD TG
Sbjct: 354 ASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 412
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
EGH V + F D L AS D+ ++WD TG LEGH V + FS
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 472
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
+ LA+ +D T RIWD K + + HS+L++ V F + L + S D TV++
Sbjct: 473 HDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFS-HDSRLLASASNDQTVRI 531
Query: 523 W 523
W
Sbjct: 532 W 532
Score = 308 (113.5 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 80/245 (32%), Positives = 114/245 (46%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S D+ + E+ L T G + +SHD LLA++S S VKIW
Sbjct: 313 SASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDS-TVKIWDTGTGSL 371
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
L+GH + V FS S +A++S D T ++W+T GSL +T +GH D + + F
Sbjct: 372 QHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH 431
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
+ L + S D T ++WD TG EGH V + F D L AS D R+WD
Sbjct: 432 DSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWD 491
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
G LEGH V +SFS + LA+ D T RIWD+ R + + I
Sbjct: 492 TEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDAT-IE 550
Query: 500 QVKFE 504
++F+
Sbjct: 551 AMRFD 555
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 375 (137.1 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 91/278 (32%), Positives = 139/278 (50%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
C HD ++L T S +K+W + + + L GHT S ++ + S DRT
Sbjct: 261 CMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRT 319
Query: 352 ARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
++W+T DGSLL+T QGH + MA +G L T S D T R+WDV++G L GH
Sbjct: 320 VKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGH 377
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+V + F DG+ S G D ++W+ TGR I L GH V + F + +
Sbjct: 378 HAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCS 435
Query: 471 GGEDNTCRIWDLRK---RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
G D + R+WD + ++ + ++ H++L S ++ G LV+ + D V+VW +
Sbjct: 436 GSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR---GNILVSCNADSHVRVWDIHE 492
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V LSGH + +TSL +AT S D +KLW
Sbjct: 493 GTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 240 (89.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 66/244 (27%), Positives = 113/244 (46%)
Query: 295 SHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARL 354
S G + + S VK+WS L+GHT +T + + + T S D T R+
Sbjct: 305 SQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT--STVRCMAMAGSILVTGSRDTTLRV 362
Query: 355 WNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRS 413
W+ + G L T GH + + F G + + +D T ++W+ TG + GH+
Sbjct: 363 WDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR 420
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRT--GRSILAL-EGHVKPVLGISFSPNGYHLAT 470
VY + F + S+ S LD RVWD G+ +AL +GH G+ G L +
Sbjct: 421 VYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVS 478
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
D+ R+WD+ + ++++ H + I+ +++ + + T S D TVK+W L
Sbjct: 479 CNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIERGAL 536
Query: 531 VKSL 534
++ L
Sbjct: 537 IRDL 540
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 65/264 (24%), Positives = 107/264 (40%)
Query: 306 LSGVVKIWSMPRLQKFSALKGHTERATDV-TFSPVSNHVATSSADRTARLWNTDGSL-LN 363
+S + KIW +++F T+R T + ++ V + L N L L
Sbjct: 157 ISEIDKIWKSLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQPCDL-NVHRFLKLQ 215
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG-IAFHPD 422
F +R A +YL +K W + G +L GH V + H D
Sbjct: 216 KFGDIFERAA-----DKSRYLRADKIEKNWNANPI-MGSAVL--RGHEDHVITCMQIHDD 267
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
+ S D +VW + G + L GH V S G ++ +G D T ++W
Sbjct: 268 VLVTGSD--DNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST 325
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVT 542
L+ + H+ S V+ G LVTGS D T++VW + + +L GH A V
Sbjct: 326 VDGSLLHTLQGHT---STVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR 382
Query: 543 SLDIHPDEQSIATVSHDRWIKLWS 566
+ D ++ + +D +K+W+
Sbjct: 383 CVQF--DGTTVVSGGYDFTVKIWN 404
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 375 (137.1 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 91/278 (32%), Positives = 139/278 (50%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
C HD ++L T S +K+W + + + L GHT S ++ + S DRT
Sbjct: 261 CMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRT 319
Query: 352 ARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
++W+T DGSLL+T QGH + MA +G L T S D T R+WDV++G L GH
Sbjct: 320 VKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGH 377
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+V + F DG+ S G D ++W+ TGR I L GH V + F + +
Sbjct: 378 HAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCS 435
Query: 471 GGEDNTCRIWDLRK---RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
G D + R+WD + ++ + ++ H++L S ++ G LV+ + D V+VW +
Sbjct: 436 GSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR---GNILVSCNADSHVRVWDIHE 492
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V LSGH + +TSL +AT S D +KLW
Sbjct: 493 GTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 240 (89.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 66/244 (27%), Positives = 113/244 (46%)
Query: 295 SHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARL 354
S G + + S VK+WS L+GHT +T + + + T S D T R+
Sbjct: 305 SQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT--STVRCMAMAGSILVTGSRDTTLRV 362
Query: 355 WNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRS 413
W+ + G L T GH + + F G + + +D T ++W+ TG + GH+
Sbjct: 363 WDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR 420
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRT--GRSILAL-EGHVKPVLGISFSPNGYHLAT 470
VY + F + S+ S LD RVWD G+ +AL +GH G+ G L +
Sbjct: 421 VYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVS 478
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
D+ R+WD+ + ++++ H + I+ +++ + + T S D TVK+W L
Sbjct: 479 CNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIERGAL 536
Query: 531 VKSL 534
++ L
Sbjct: 537 IRDL 540
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 65/264 (24%), Positives = 107/264 (40%)
Query: 306 LSGVVKIWSMPRLQKFSALKGHTERATDV-TFSPVSNHVATSSADRTARLWNTDGSL-LN 363
+S + KIW +++F T+R T + ++ V + L N L L
Sbjct: 157 ISEIDKIWKSLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQPCDL-NVHRFLKLQ 215
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG-IAFHPD 422
F +R A +YL +K W + G +L GH V + H D
Sbjct: 216 KFGDIFERAA-----DKSRYLRADKIEKNWNANPI-MGSAVL--RGHEDHVITCMQIHDD 267
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
+ S D +VW + G + L GH V S G ++ +G D T ++W
Sbjct: 268 VLVTGSD--DNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST 325
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVT 542
L+ + H+ S V+ G LVTGS D T++VW + + +L GH A V
Sbjct: 326 VDGSLLHTLQGHT---STVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR 382
Query: 543 SLDIHPDEQSIATVSHDRWIKLWS 566
+ D ++ + +D +K+W+
Sbjct: 383 CVQF--DGTTVVSGGYDFTVKIWN 404
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 277 (102.6 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 70/256 (27%), Positives = 122/256 (47%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F +GK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDQTGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W++ TG + GH + V + + +G LA+ D T R+W + ++
Sbjct: 210 ASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ + ++ + K SG+ + LSG K + DI
Sbjct: 270 AELREHEHVVECISWAPESAHPTISEATGSENKK-SGKPGPFL--LSGSRDKTIKMWDIS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 250 (93.1 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 61/197 (30%), Positives = 96/197 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +L+ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGED 474
+P H ATG E+
Sbjct: 285 APESAHPTISEATGSEN 301
Score = 219 (82.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 51/162 (31%), Positives = 78/162 (48%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH V + FHP SL S DA +VWD G L+GH V ISF G L
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
A+ D T ++WD + + + + H + +S V P G +V+ S D T+K+W
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTMKMWEVATG 224
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
VK+ +GH V + + D +A+ S+D+ +++W K
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATK 266
Score = 192 (72.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WD+ TG+ L+ GH V G+ FHP G SC D R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 190 (71.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
AL GH PV + F P + + ED T ++WD + H++ + + F+ Q
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD-QT 161
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
G L + S DMT+K+W + F+ ++++ GH+ V+S+ I P+ I + S D+ +K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMW 219
Score = 187 (70.9 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F P G + + +D T RIWD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPY-VVTGSVDQTVKVWECR 410
Score = 176 (67.0 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F P G F+V+ + D T+++W
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPG-GRFVVSCADDKTLRIWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+LS HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ G LLA+ S +K+W + + GH +
Sbjct: 138 EAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G L + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGS 424
R+W V T + L+E H V I++ P+ +
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESA 289
Score = 133 (51.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 345 TSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
+ S D+T ++W+ + G L T GH + + + FHP G+++ + + DKT R+WD
Sbjct: 313 SGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRC 372
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ H V + FH + +D +VW+ R
Sbjct: 373 MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 32/126 (25%), Positives = 54/126 (42%)
Query: 274 ESLYLDCTES-GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERAT 332
ES + +E+ G + SG G L + S +K+W + L GH
Sbjct: 287 ESAHPTISEATGSENKKSG----KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVR 342
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
V F P V + + D+T R+W+ + T H + + FH + Y+ T S D+
Sbjct: 343 GVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQ 402
Query: 392 TWRLWD 397
T ++W+
Sbjct: 403 TVKVWE 408
Score = 107 (42.7 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + HP + + + +
Sbjct: 299 SENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRIWDYKNK 370
Score = 70 (29.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 97/301 (32%), Positives = 153/301 (50%)
Query: 292 CSYS--HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSAD 349
CS H +++AT + ++ P Q S L GH+++ T V F S+ V T+SAD
Sbjct: 226 CSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASAD 285
Query: 350 RTARLWNT--DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
+T R+W DG+ T H + + HP+ KY + S D TW +D+ +G L
Sbjct: 286 KTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLA 345
Query: 406 LQEGHSRSV-Y-GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
S++V Y AFHPDG + + ++ ++WD+++ ++ +GH V ISFS
Sbjct: 346 QVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLY-VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
NGY LAT ED R+WDLRK ++ + A +N V+F+P Y + S +
Sbjct: 406 NGYFLATAAEDGV-RLWDLRKLRNFKSFLSADAN---SVEFDPSGSYLGIAASDIKVYQT 461
Query: 523 WSGR-DFKLVKSL---SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDV 578
S + ++ L+K+L SG K T + D Q +A S DR ++++ GDE A +V
Sbjct: 462 ASVKAEWNLIKTLPDLSG-TGKATCVKFGSDAQYVAVGSMDRNLRIFGL--PGDEKA-NV 517
Query: 579 D 579
D
Sbjct: 518 D 518
Score = 190 (71.9 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 64/256 (25%), Positives = 113/256 (44%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSA---LKGHTERATDVTFS 337
T +G + ++ + D +L+ T+S V+IW P ++ L H+ VT
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTFQG---HLDRLARMAFHPSGKYLGTTSFDKTW 393
P + + ++S D T ++ + GS L ++D A AFHP G LGT +
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAA-AFHPDGLILGTGTSQSVV 377
Query: 394 RLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHV 453
++WDV + + +GH+ V I+F +G A+ D + R+WDLR R+ +
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWDLRKLRNFKSFLS-- 434
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS----LYVIPAHSNL--ISQVKFEPQE 507
+ F P+G +L D +++ K+ + +P S + VKF
Sbjct: 435 ADANSVEFDPSGSYLGIAASD--IKVYQTASVKAEWNLIKTLPDLSGTGKATCVKFGSDA 492
Query: 508 GYFLVTGSYDMTVKVW 523
Y V GS D ++++
Sbjct: 493 QYVAV-GSMDRNLRIF 507
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 290 SGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSAD 349
+ ++ DG +L T + VVKIW + + GHT T ++FS +AT++ D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 350 RTARLWNTDGSLLNTFQGHLDRLAR-MAFHPSGKYLGTTSFD-KTWRLWDVDTGVELL-- 405
RLW D L F+ L A + F PSG YLG + D K ++ V L+
Sbjct: 417 GV-RLW--DLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKT 473
Query: 406 LQE--GHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
L + G ++ + F D A +D R++ L
Sbjct: 474 LPDLSGTGKATC-VKFGSDAQYVAVGSMDRNLRIFGL 509
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 369 (135.0 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 81/215 (37%), Positives = 112/215 (52%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ G ++S D L + S ++WS+ A KGHT DV F P ++ AT+S
Sbjct: 381 PVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATAS 440
Query: 348 ADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+TA+LW+ D L F GHL + + FHP+ Y+ T S DKT RLWDV G + +
Sbjct: 441 HDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRV 500
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH++ V +A PDG AS + L +WD+ TGR I + GH + +SFS
Sbjct: 501 FNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSREST 560
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
L +GG D T R WD+ K Y P S+L V
Sbjct: 561 VLVSGGSDCTVRAWDVFKTN--YNNPVSSSLTGSV 593
Score = 306 (112.8 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 68/249 (27%), Positives = 116/249 (46%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLAT--SSLSGVVKIWSMPRLQKFSALKGHTERATDVT 335
++C E D + C + L + + + K S+ L H+ T
Sbjct: 327 MNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTT 386
Query: 336 FSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWR 394
FSP + ++ + S D +ARLW+ D + L ++GH + +AF P G Y T S D+T +
Sbjct: 387 FSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQ 446
Query: 395 LWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK 454
LW D L + GH V + FHP+ + + D R+WD+ G S+ GH +
Sbjct: 447 LWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQ 506
Query: 455 PVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTG 514
PV ++ +P+G+ +A+ + +WD+ + + + H I + F +E LV+G
Sbjct: 507 PVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFS-RESTVLVSG 565
Query: 515 SYDMTVKVW 523
D TV+ W
Sbjct: 566 GSDCTVRAW 574
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 58/219 (26%), Positives = 105/219 (47%)
Query: 347 SADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
S ++ + ++DGS+ H + F P KYL + S D + RLW VDT L+
Sbjct: 359 SLPKSTSVEDSDGSV--RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVA 416
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+GH+ V+ +AF P G A+ D A++W + GH+ V ++F PN
Sbjct: 417 YKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSA 476
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
++ TG D TCR+WD+ + S+ V H+ ++ V P +G+ + + + + +W
Sbjct: 477 YVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAP-DGHTMASADSEGLIHLWDIG 535
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ +K++ GH + SL + + + D ++ W
Sbjct: 536 TGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Score = 224 (83.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G P+ ++ G+ AT+S ++WS + GH VTF P S +V
Sbjct: 419 GHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYV 478
Query: 344 ATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
T S+D+T RLW+ G + F GH + +A P G + + + LWD+ TG
Sbjct: 479 LTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGR 538
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
+ GH ++Y ++F + ++ S G D R WD+
Sbjct: 539 RIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 83/274 (30%), Positives = 142/274 (51%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ + V + P V ++S+D T R+W+
Sbjct: 234 DTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWS 293
Query: 357 -TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
T G+ + + H + ++ H +G YL ++S D+ W D+ TG L + E +
Sbjct: 294 VTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCA 353
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + D+ ++WDL+ ++ GH PV I+FS NGY+LATG +
Sbjct: 354 LTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQ 413
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ I +N + + F+ Q G +L G D ++V+ + + V
Sbjct: 414 DSSLKLWDLRKLKNFKTITLDNNYEVKSLVFD-QSGTYLAVGGSD--IRVYICKQWSEVL 470
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ S H VT + Q +A+ DR +K +S
Sbjct: 471 NFSDHSGLVTGVAFGEHAQFLASTGMDRSLKFYS 504
Score = 193 (73.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 58/249 (23%), Positives = 110/249 (44%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + +S Y ++ ++S +++WS+ ++ H T ++
Sbjct: 260 TLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATG 319
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMA--FHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L A FHP G GT + D ++WD
Sbjct: 320 DYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWD 379
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS V IAF +G A+ D+ ++WDLR ++ + L+ + +
Sbjct: 380 LKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYE- 438
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D R++ ++ + HS L++ V F + FL +
Sbjct: 439 VKSLVFDQSGTYLAVGGSD--IRVYICKQWSEVLNFSDHSGLVTGVAFG-EHAQFLASTG 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 MDRSLKFYS 504
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 41/163 (25%), Positives = 76/163 (46%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH++ V + +HP ++ S D+ RVW + G + + H V G+S G +
Sbjct: 262 KGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDY 321
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
L + ED D++ + L + + ++ +F P +G TG+ D +K+W
Sbjct: 322 LLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHP-DGLIFGTGTGDSQIKIWDL 380
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ V + GH VT++ + +AT + D +KLW R
Sbjct: 381 KERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLR 423
Score = 135 (52.6 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 43/154 (27%), Positives = 66/154 (42%)
Query: 292 CSYSH-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C+ H DG + T + +KIW + + GH+ T + FS ++AT + D
Sbjct: 356 CAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDS 415
Query: 351 TARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
+ +LW D L F+ LD + + F SG YL D R++ E+L
Sbjct: 416 SLKLW--DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDI--RVYICKQWSEVLN 471
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
HS V G+AF AS G+D + + L
Sbjct: 472 FSDHSGLVTGVAFGEHAQFLASTGMDRSLKFYSL 505
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/170 (24%), Positives = 76/170 (44%)
Query: 410 HSRSVYGIA---FHP-DGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
HS SV GI P D + + G D V+D R + + L+GH K V + + P
Sbjct: 218 HSASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQ 277
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+ + D+T R+W + + V+ AH + ++ + G +L++ S D + W+
Sbjct: 278 AVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHAT-GDYLLSSSED---QYWAF 333
Query: 526 RDF---KLVKSLSGHEA--KVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
D +++ ++ A +T HPD T + D IK+W + +
Sbjct: 334 SDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKER 383
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 83/292 (28%), Positives = 148/292 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G +S +S+DGNLLA++S+ + +WS +GH+ +D+ +S S
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 341 NHVATSSADRTARLWNTDG--SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++ ++S D T R+W+ L +GH + + + F+P + + SFD+T R+W+V
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
TG + + + HS + + F+ DGSL S D ++WD + G + L P +
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS 217
Query: 459 IS-FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVK--FEPQEGYFLVTGS 515
+ FSPNG + D+T ++ + K L V H+N + + F G ++V+GS
Sbjct: 218 FAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGS 277
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATV-SH-DRWIKLW 565
D V +W + +++ L GH V S+ HP + I++ +H D+ I++W
Sbjct: 278 EDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 82/275 (29%), Positives = 142/275 (51%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
+ N + SG V I+ R K L+GHT + V FS N +A++S D+T LW+
Sbjct: 14 NANSTGNAGTSGNVPIYKPYRHLK--TLEGHTAAISCVKFSNDGNLLASASVDKTMILWS 71
Query: 357 -TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSV 414
T+ SL++ ++GH ++ +A+ Y + S D T R+WD + E L + GH+ V
Sbjct: 72 ATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFV 131
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
+ + F+P +L S D R+W+++TG+ + ++ H P+ + F+ +G + + D
Sbjct: 132 FCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHD 191
Query: 475 NTCRIWDLRKRKSLY-VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
+C+IWD ++ L +I S +S KF P G F++ + D T+K+ + K +K
Sbjct: 192 GSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPN-GKFILVATLDSTLKLSNYATGKFLKV 250
Query: 534 LSGHEAKV---TSLDIHPDEQSIATVSHDRWIKLW 565
+GH KV TS + + I + S D + LW
Sbjct: 251 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 238 (88.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 47/162 (29%), Positives = 83/162 (51%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
EGH+ ++ + F DG+L AS +D +W I EGH + +++S + ++
Sbjct: 40 EGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHY 99
Query: 468 LATGGEDNTCRIWDLRKR-KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ +D T RIWD R + L V+ H+N + V F P +V+GS+D T+++W +
Sbjct: 100 TCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN-LIVSGSFDETIRIWEVK 158
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
K V+ + H ++S+ + D I + SHD K+W +
Sbjct: 159 TGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 86/286 (30%), Positives = 141/286 (49%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNH 342
G ++ +S +G LAT S + +WS+ P+ + F + GH + T V FSP+ N
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV-GHKDVITSVQFSPLGNL 74
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A++S DRT RLW D + F+ H + + F G++L + S DK+ ++W++
Sbjct: 75 LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQ 134
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L H+ V F PDG L SC D ++WD + + V ++F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAF 194
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
+PNG +A+ G D+T +IWD+R K L HS ++ V F P G +L+T S D T+K
Sbjct: 195 NPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS-GNYLITASSDGTLK 253
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ + +L+ +L GH V ++ + + D + LW T
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRT 299
Score = 286 (105.7 bits), Expect = 7.5e-23, P = 7.5e-23
Identities = 74/250 (29%), Positives = 111/250 (44%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLAR 374
P L+++ KGH T V FSP +AT S D LW+ + + GH D +
Sbjct: 8 PVLERY--FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F P G L + S D+T RLW D + + H+ V + F DG AS D
Sbjct: 66 VQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW++ R + +L H V FSP+G + + ED T +IWD ++ +
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDF 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V F P G + + D TVK+W R KL++ H V + HP +
Sbjct: 186 VGFANFVAFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLI 244
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 245 TASSDGTLKI 254
Score = 284 (105.0 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 66/220 (30%), Positives = 108/220 (49%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L F+GH + + F P+GK L T S+D LW + GH + +
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSV 66
Query: 418 AFHPDGSLAASCGLDALARVW--DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
F P G+L AS D R+W D R G+S + H PV + FS +G LA+ ED
Sbjct: 67 QFSPLGNLLASASRDRTIRLWIPDKR-GKSS-EFKAHTAPVRSVDFSADGQFLASASEDK 124
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
+ ++W++ +++ LY + H++ + KF P +G +V+ S D T+K+W + + V + S
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
+ +P+ IA+ D +K+W R NK +H
Sbjct: 184 DFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 359 (131.4 bits), Expect = 8.0e-33, P = 8.0e-33
Identities = 92/292 (31%), Positives = 153/292 (52%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW--N 356
+++AT + ++ P Q L GH+++ T + F P T SAD+T ++W +
Sbjct: 234 DIIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGS 293
Query: 357 TDGSL--LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
+G+ ++T + H + + H + KY T S D TW +D+ +G L Q G S
Sbjct: 294 EEGNYNCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSG-SCLTQVGESSGQ 352
Query: 415 YGI---AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
G +FHPDG + + +A+ ++WD++T ++ EGHV PV +SFS NGY LAT
Sbjct: 353 EGYTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATA 412
Query: 472 GEDNTCRIWDLRKRKSLYVI-PAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGR-DF 528
D ++WDLRK ++ I P S+ + V+F+ Y V GS +V + + ++
Sbjct: 413 ALDGV-KLWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEW 471
Query: 529 KLVKSL---SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMD 577
LVK+L SG KVT++ D + IA S DR ++++ + G++ MD
Sbjct: 472 NLVKTLPDLSG-TGKVTNVKFGTDAKYIAVGSMDRNLRIFG--HPGEDDQMD 520
Score = 218 (81.8 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 69/262 (26%), Positives = 113/262 (43%)
Query: 280 CTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSA---LKGHTERATDVTF 336
CT +G + ++ + L T S VKIW ++ LK HT VT
Sbjct: 257 CTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTV 316
Query: 337 SPVSNHVATSSADRTARLWNT-DGSLLNTF--QGHLDRLARMAFHPSGKYLGTTSFDKTW 393
+ T+S D T ++ GS L + +FHP G LGT + +
Sbjct: 317 HATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSASFHPDGLILGTGTTEAVV 376
Query: 394 RLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHV 453
++WDV T + EGH V ++F +G A+ LD + ++WDLR R+ + +
Sbjct: 377 KIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDGV-KLWDLRKLRNFRTISPYD 435
Query: 454 K--PVLGISFSPNGYHLATGGEDNTC-RIWDLRKRKSLY-VIPAHSNL--ISQVKFEPQE 507
P + F +G +LA GG D ++ +++ +L +P S ++ VKF
Sbjct: 436 SDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVKTLPDLSGTGKVTNVKFGTDA 495
Query: 508 GYFLVTGSYDMTVKVWS--GRD 527
Y V GS D ++++ G D
Sbjct: 496 KYIAV-GSMDRNLRIFGHPGED 516
Score = 173 (66.0 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 51/199 (25%), Positives = 80/199 (40%)
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
M HPS + T D L+D +G L GHS+ + + F P L + D
Sbjct: 227 MDIHPSKDIIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKT 286
Query: 435 ARVWD-LRTGR--SILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
++W G I L+ H V ++ + T +DNT +D+ L +
Sbjct: 287 VKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQV 346
Query: 492 PAHSNL--ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
S + F P +G L TG+ + VK+W + V GH VT++ +
Sbjct: 347 GESSGQEGYTSASFHP-DGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSEN 405
Query: 550 EQSIATVSHDRWIKLWSTR 568
+AT + D +KLW R
Sbjct: 406 GYFLATAALDG-VKLWDLR 423
Score = 163 (62.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 44/173 (25%), Positives = 76/173 (43%)
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
L + + + + HP + A+ G+D A ++D +G+ + L GH K + + F P
Sbjct: 216 LHKTNKPGILSMDIHPSKDIIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRD 275
Query: 466 YHLATGGEDNTCRIWDLRKRKS---LYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT--- 519
TG D T +IW + + ++ + H+ + V + YF VT S D T
Sbjct: 276 ELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHATQKYF-VTASKDNTWCF 334
Query: 520 VKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
+ SG V SG E TS HPD + T + + +K+W + + +
Sbjct: 335 YDIPSGSCLTQVGESSGQEG-YTSASFHPDGLILGTGTTEAVVKIWDVKTQSN 386
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 83/281 (29%), Positives = 139/281 (49%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+ +D LL ++S G + IW K A+ + ++P N+VA D
Sbjct: 63 WGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ GH L+ F G+ + T+S D T LWD++TG +
Sbjct: 123 IYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQII-TSSGDTTCALWDIETGQQTTTFT 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GHS V ++ PD S DA +++WD+R G + GH+ + +SF P+GY
Sbjct: 182 GHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAF 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
ATG +D TCR++DLR + L ++ +H N+I + V F + G L+ G D VW
Sbjct: 242 ATGSDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCSVWDA 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++++W+
Sbjct: 300 LKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 69/241 (28%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD-DGQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P K + + D + +LWD+ G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQS 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + ++F P G A+ DA R++DLR + +L L H + GI+ FS
Sbjct: 222 FTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +++W
Sbjct: 281 SGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLRIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 227 (85.0 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 63/198 (31%), Positives = 97/198 (48%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + DG ++ TSS +W + Q+ + GH+ ++ SP + +
Sbjct: 146 LSCCRFLDDGQII-TSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +++LW+ DG +F GH+ + ++F PSG T S D T RL+D+ ELLL
Sbjct: 205 DASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI AF G L + D VWD L+ GR+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ RIW+
Sbjct: 323 DGMAVATGSWDSFLRIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 60/228 (26%), Positives = 100/228 (43%)
Query: 345 TSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
TS+ D R+ T +GHL ++ M + + L + S D +WD T ++
Sbjct: 34 TSNMDSVGRI---QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKM 90
Query: 405 LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGIS 460
S V A+ P G+ A GLD + +++L+T G R L GH +
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
F +G + + G D TC +WD+ + HS + + P F V+G+ D +
Sbjct: 151 FLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTF-VSGACDASS 208
Query: 521 KVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
K+W RD +S +GH + + ++ P + AT S D +L+ R
Sbjct: 209 KLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLR 256
Score = 186 (70.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G ++
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I++L+ R+ ++ V +P H+ +S +F +G ++T S D T +W
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFL-DDGQ-IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + +GH V SL + PD ++ + + D KLW R+
Sbjct: 171 IETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRD 215
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 42/174 (24%), Positives = 66/174 (37%)
Query: 269 ALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHT 328
AL +E+ T +G + S S D + + K+W + + GH
Sbjct: 167 ALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHI 226
Query: 329 ERATDVTFSPVSNHVATSSADRTARLWNTDGS---LLNTFQGHLDRLARMAFHPSGKYLG 385
V+F P AT S D T RL++ LL + + + +AF SG+ L
Sbjct: 227 SDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLL 286
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
D +WD G + GH V + DG A+ D+ R+W+
Sbjct: 287 AGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 86/281 (30%), Positives = 141/281 (50%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
+S ++ + LAT S + IW++ P+ + F + GHT+ T V F+P + VA+SS
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTDVITGVNFAPSGSLVASSS 79
Query: 348 ADRTARLWNTDGSLLNT-FQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+T RLW +T F+ H + + F G+ L T S DK+ ++W V+ L
Sbjct: 80 RDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS 139
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
H+ V F PDG L ASCG D R+WD + + I + + F+ +G
Sbjct: 140 LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGT 199
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+A+ G DNT +IWD+R K + H+ ++ F P G +L++GS D T+K+
Sbjct: 200 CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS-GNYLISGSSDSTIKILDLL 258
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ +L+ +L GH+ V ++ D A+ D + +W T
Sbjct: 259 EGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKT 299
Score = 300 (110.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 76/276 (27%), Positives = 132/276 (47%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSS 347
++G +++ G+L+A+SS V++W+ P ++ S + K HT V FS + T+S
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWT-PSIKGESTVFKAHTASVRSVHFSRDGQRLVTAS 121
Query: 348 ADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D++ ++W + L + H + + F P G+ + + D+T RLWD + + +
Sbjct: 122 DDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINI 181
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ S + F+ G+ AS G D ++WD+RT + I + H V SF P+G
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGN 241
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+L +G D+T +I DL + + +Y + H + V F ++G +G D V +W
Sbjct: 242 YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFS-RDGDLFASGGADSQVLMWKTN 300
Query: 527 --DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ LS H +VT D P I SH R
Sbjct: 301 FDSLNYRELLSKHSKRVTP-DPPPHLMDIYPRSHHR 335
Score = 298 (110.0 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 70/250 (28%), Positives = 116/250 (46%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLAR 374
P L++ KGH + + F+P + +AT S D++ +WN + F GH D +
Sbjct: 8 PTLERH--FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITG 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG + ++S D+T RLW E + + H+ SV + F DG + D
Sbjct: 66 VNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + + + +L H V FSP+G +A+ G+D T R+WD + + + +
Sbjct: 126 VKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V F G + + D T+K+W R KL++ H A V HP +
Sbjct: 186 GGSATFVDFN-SSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLI 244
Query: 555 TVSHDRWIKL 564
+ S D IK+
Sbjct: 245 SGSSDSTIKI 254
Score = 284 (105.0 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 61/218 (27%), Positives = 103/218 (47%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D +L F+GH D ++ F+P+ K L T S DK+ +W++ GH+ + G+
Sbjct: 7 DPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGV 66
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P GSL AS D R+W + H V + FS +G L T +D +
Sbjct: 67 NFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSV 126
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W + ++K LY + H+N + +F P +G + + D TV++W + + + +
Sbjct: 127 KVWGVERKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
T +D + IA+ D IK+W R NK +H
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQH 223
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 85/286 (29%), Positives = 140/286 (48%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNH 342
G ++ +S G LAT+S + +W+ P+ + F + GH + T V FSP+ N
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGNL 74
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A++S DRT RLW D + F+ H + + F G++L T S DK+ ++W++
Sbjct: 75 LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQ 134
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L H+ V F PDG L SC D ++WD + + V + F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDF 194
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
+PNG +A+ G D+T +IWD+R K L HS ++ V F P G +++T S D T+K
Sbjct: 195 NPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS-GNYIITASSDGTLK 253
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ + +L+ +L GH V ++ + ++ D + LW T
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRT 299
Score = 303 (111.7 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 70/220 (31%), Positives = 109/220 (49%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L F+GH + + F PSGK L T S+D LW+ GH V +
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSV 66
Query: 418 AFHPDGSLAASCGLDALARVW--DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
F P G+L AS D R+W D R G+S + H PV + FS +G LAT ED
Sbjct: 67 QFSPLGNLLASASRDRTVRLWIPDKR-GKSS-EFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
+ ++W++ +++ LY + H++ + KF P +G +V+ S D T+K+W + + V + S
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
+D +P+ IA+ D +K+W R NK +H
Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223
Score = 291 (107.5 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 75/250 (30%), Positives = 111/250 (44%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLAR 374
P L+++ KGH T V FSP +AT+S D LWN + GH D +
Sbjct: 8 PVLERY--FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTS 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F P G L + S D+T RLW D + + H+ V + F DG A+ D
Sbjct: 66 VQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW++ R + +L H V FSP+G + + ED T +IWD ++ +
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V F P G + + D TVK+W R KL++ H V + HP I
Sbjct: 186 VGFANFVDFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYII 244
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 245 TASSDGTLKI 254
Score = 284 (105.0 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 76/266 (28%), Positives = 125/266 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
++ +S GNLLA++S V++W + K S K HT V FS +AT+S
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 349 DRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D++ ++WN L + H + F P G+ + + S DKT ++WD T + +
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQCV-- 179
Query: 408 EGHSRSVYGIA----FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
S SV G A F+P+G+ AS G D ++WD+R + + + H V +SF P
Sbjct: 180 NNFSDSV-GFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G ++ T D T +I DL + + +Y + H+ + V F + G +G D V +W
Sbjct: 239 SGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS-KGGELFSSGGADTQVLLW 297
Query: 524 -SGRDFKLVKSLSGHEAKVTSLDIHP 548
+ D+ K + K D P
Sbjct: 298 RTNFDYLNCKDMIKRNLKRLHFDSSP 323
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 338 (124.0 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 76/238 (31%), Positives = 125/238 (52%)
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAF 377
+ ++ L GH+ TFSP + V +SSAD T RLW+T + L ++GH + F
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
P G Y + S D+T R+W +D L + GH V + +HP+ + A+ D R+
Sbjct: 469 SPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD++TG + GH VL ++ SP+G ++A+G ED T +WDL + + + H++
Sbjct: 529 WDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC 588
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKS--LSGHEAKVTSLDIHPDEQS 552
+ + + EG L +GS D TVK+W KL K+ +G+ ++ SL P + +
Sbjct: 589 VWSLSYSG-EGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKST 645
Score = 334 (122.6 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 74/206 (35%), Positives = 103/206 (50%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G P+ ++S G+ + +SS +++WS KGH D FSP ++
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 344 ATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
A+ S DRTAR+W+ D L GHL + + +HP+ Y+ T S DKT RLWDV TG
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGE 535
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
+ + GH V +A PDG AS D +WDL T R I L GH V +S+S
Sbjct: 536 CVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS 595
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSL 488
G LA+G D T ++WD+ L
Sbjct: 596 GEGSLLASGSADCTVKLWDVTSSTKL 621
Score = 280 (103.6 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 57/199 (28%), Positives = 99/199 (49%)
Query: 367 GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLA 426
GH + F P G ++ ++S D T RLW L+ +GH+ V+ F P G
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 427 ASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRK 486
ASC D AR+W + + + + GH+ V + + PN ++ATG D T R+WD++ +
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGE 535
Query: 487 SLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ + H +++ + P +G ++ +G D T+ +W + + L GH + V SL
Sbjct: 536 CVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 594
Query: 547 HPDEQSIATVSHDRWIKLW 565
+ +A+ S D +KLW
Sbjct: 595 SGEGSLLASGSADCTVKLW 613
Score = 248 (92.4 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 53/162 (32%), Positives = 83/162 (51%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
LLL GHS VY F P G S D R+W + +++ +GH PV FSP
Sbjct: 413 LLL--GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSP 470
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
G++ A+ D T RIW + + + L ++ H + + V++ P Y + TGS D TV++W
Sbjct: 471 FGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNY-IATGSSDKTVRLW 529
Query: 524 SGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ + V+ GH + V SL + PD + +A+ D I +W
Sbjct: 530 DVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 571
Score = 178 (67.7 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 37/125 (29%), Positives = 64/125 (51%)
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF 503
RS L GH PV +FSP G + + D T R+W + +L H+ + +F
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P G++ + S+D T ++WS + ++ ++GH + V + HP+ IAT S D+ ++
Sbjct: 469 SPF-GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVR 527
Query: 564 LWSTR 568
LW +
Sbjct: 528 LWDVQ 532
Score = 63 (27.2 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRL-QKFS-ALKGHTERATDVTFSP 338
L+ S SHDG+L+A +K+W M ++ Q S AL+ + ++D + P
Sbjct: 355 LNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAEND-SSDQSIGP 405
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 83/281 (29%), Positives = 139/281 (49%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+ +D LL ++S G + IW K A+ + ++P N+VA D
Sbjct: 63 WGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ GH L+ F G+ + T+S D T LWD++TG +
Sbjct: 123 IYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQII-TSSGDTTCALWDIETGQQTTTFT 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GHS V ++ PD S DA +++WD+R G + GH+ + +SF P+GY
Sbjct: 182 GHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAF 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
ATG +D TCR++DLR + L ++ +H N+I + V F + G L+ G D VW
Sbjct: 242 ATGSDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCSVWDA 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++++W+
Sbjct: 300 LKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 262 (97.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 69/241 (28%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD-DGQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P K + + D + +LWD+ G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQS 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + ++F P G A+ DA R++DLR + +L L H + GI+ FS
Sbjct: 222 FTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +++W
Sbjct: 281 SGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLRIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 230 (86.0 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 64/198 (32%), Positives = 97/198 (48%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + DG ++ TSS +W + Q+ + GH+ ++ SP + +
Sbjct: 146 LSCCRFLDDGQII-TSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +++LW+ DG +F GH+ + ++F PSG T S D T RL+D+ ELLL
Sbjct: 205 DASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI AF G L + D VWD L+ GRS + L GH V + +
Sbjct: 265 S-HDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ RIW+
Sbjct: 323 DGMAVATGSWDSFLRIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 60/228 (26%), Positives = 100/228 (43%)
Query: 345 TSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
TS+ D R+ T +GHL ++ M + + L + S D +WD T ++
Sbjct: 34 TSNMDSVGRI---QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKM 90
Query: 405 LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGIS 460
S V A+ P G+ A GLD + +++L+T G R L GH +
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
F +G + + G D TC +WD+ + HS + + P F V+G+ D +
Sbjct: 151 FLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTF-VSGACDASS 208
Query: 521 KVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
K+W RD +S +GH + + ++ P + AT S D +L+ R
Sbjct: 209 KLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLR 256
Score = 186 (70.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G ++
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I++L+ R+ ++ V +P H+ +S +F +G ++T S D T +W
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFL-DDGQ-IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + +GH V SL + PD ++ + + D KLW R+
Sbjct: 171 IETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRD 215
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 42/174 (24%), Positives = 66/174 (37%)
Query: 269 ALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHT 328
AL +E+ T +G + S S D + + K+W + + GH
Sbjct: 167 ALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHI 226
Query: 329 ERATDVTFSPVSNHVATSSADRTARLWNTDGS---LLNTFQGHLDRLARMAFHPSGKYLG 385
V+F P AT S D T RL++ LL + + + +AF SG+ L
Sbjct: 227 SDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLL 286
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
D +WD G + GH V + DG A+ D+ R+W+
Sbjct: 287 AGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 359 (131.4 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 93/291 (31%), Positives = 152/291 (52%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD-----VTFSPVSNHVATSS 347
++S+DG LAT + +I+ + +K A +E+ D V FSP N++AT +
Sbjct: 288 NFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGA 346
Query: 348 ADRTARLWNTDGSLL-NTFQGH-LDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG---V 402
D+T ++W+ + +TF GH LD + + + G+++ + S DK ++WD++ G
Sbjct: 347 EDKTVKVWDIHTKKIQHTFYGHELD-IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAF 405
Query: 403 ELLLQE-GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L +E G V +A PDG L A+ LD + R+WD +TG + EGH+ V ++F
Sbjct: 406 TLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAF 465
Query: 462 SPNGYHLATGGEDNTCRIWDL---RKR-KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYD 517
SP+G LA+G D + ++WDL R R + H + + V F P +G +L++GS D
Sbjct: 466 SPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP-DGSWLISGSKD 524
Query: 518 MTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQS---IATVSHDRWIKLW 565
+V+ W R+ L GH+ V S+ + P S AT S D +LW
Sbjct: 525 RSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 333 (122.3 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 84/265 (31%), Positives = 126/265 (47%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER 330
KKV + ++D +E D + +S DGN LAT + VK+W + + GH
Sbjct: 313 KKVHA-FVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELD 371
Query: 331 ATDVTFSPVSNHVATSSADRTARLWNTD-G----SLLNTFQGHLDRLARMAFHPSGKYLG 385
+ +S + + S D+ A++W+ + G +L N G + + +A P G+ +
Sbjct: 372 IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVA 431
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
S D RLWD TG L EGH SVY +AF PDG AS LD ++WDL RS
Sbjct: 432 AGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRS 491
Query: 446 I----LALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
GH VL ++FSP+G L +G +D + + WD R + ++ H N + V
Sbjct: 492 RSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISV 551
Query: 502 KFEPQE---GYFLVTGSYDMTVKVW 523
P+ G F TGS D ++W
Sbjct: 552 ALSPKNNSHGVF-ATGSGDFRSRLW 575
Score = 285 (105.4 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 78/264 (29%), Positives = 125/264 (47%)
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDR-----LARMAFHPS 380
H V FS ++AT +R+A++++ D G ++ F ++ + + F P
Sbjct: 280 HNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G YL T + DKT ++WD+ T GH +Y + + DG S D A++WD+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 441 RTGRSILALEGH-VKP---VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
G+ L V P V ++ SP+G +A G DN R+WD + L H +
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLD 458
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVW--SG-RDFKLVKS-LSGHEAKVTSLDIHPDEQS 552
+ V F P +G L +GS D ++K+W SG R ++ +GH+ V S+ PD
Sbjct: 459 SVYSVAFSP-DGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSW 517
Query: 553 IATVSHDRWIKLWSTRNKGDEHAM 576
+ + S DR ++ W RN G H M
Sbjct: 518 LISGSKDRSVQFWDPRN-GTTHMM 540
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 361 (132.1 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 81/228 (35%), Positives = 115/228 (50%)
Query: 262 IDDEIDYALKKVESLYLDCTES----GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR 317
ID E D L+++ +ES G P+ G S+S D N L +SS G +++WS+
Sbjct: 472 IDKESDDVLERIMDEKTS-SESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQT 530
Query: 318 LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMA 376
KGH D FSP + + DR ARLW TD L F GHL +
Sbjct: 531 FTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTR 590
Query: 377 FHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALAR 436
FHP+ Y+ T S D+T RLWDV G + + GH ++ +AF P+G AS D
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Query: 437 VWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+WD+ G I L+GH + + FS +G +A+G DNT R+WD+ +
Sbjct: 651 LWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMR 698
Score = 298 (110.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 70/228 (30%), Positives = 109/228 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D NL+ S + +I + L GH+ V+FSP N++ +SS D T RLW+
Sbjct: 468 DLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWS 527
Query: 357 TDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
+ L ++GH + F P G Y + D+ RLW D L + GH V
Sbjct: 528 LQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVT 587
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
FHP+ + A+ D R+WD+ G + GH P+ ++FSPNG LA+G D
Sbjct: 588 CTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG 647
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+WD+ + + H+ I +KF ++G + +GS D TV++W
Sbjct: 648 RVLLWDIGHGLMIAELKGHTGTIYALKFS-RDGEIIASGSIDNTVRLW 694
Score = 291 (107.5 bits), Expect = 8.0e-23, P = 8.0e-23
Identities = 72/252 (28%), Positives = 117/252 (46%)
Query: 314 SMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLA 373
++P + ++ L + + T V F+ S+ +A AD T R+W+ L + D
Sbjct: 413 TLPSICFYTFLNAY-QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADL-- 469
Query: 374 RMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDA 433
+ S D R+ D T E + GHS VYG++F PD + S D
Sbjct: 470 --------NLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDG 521
Query: 434 LARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPA 493
R+W L+T ++ +GH PV FSP GY+ +GG D R+W + L +
Sbjct: 522 TIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAG 581
Query: 494 HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSI 553
H ++ +F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +
Sbjct: 582 HLADVTCTRFHPNSNY-VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFL 640
Query: 554 ATVSHDRWIKLW 565
A+ S D + LW
Sbjct: 641 ASGSTDGRVLLW 652
Score = 244 (91.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 65/210 (30%), Positives = 98/210 (46%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
+ LN +QG L + F + D T R+W V T +L R V A
Sbjct: 421 TFLNAYQG----LTAVDFTDDSSLIAGGFADSTVRVWSV-TPKKL-------RKVKSAA- 467
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
D +L D L R+ D +T L GH PV G+SFSP+ +L + ED T R+
Sbjct: 468 --DLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRL 525
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
W L+ L H+ + +F P GY+ V+G +D ++W+ ++ ++ +GH A
Sbjct: 526 WSLQTFTCLVGYKGHNYPVWDTQFSPF-GYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 584
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
VT HP+ +AT S DR ++LW N
Sbjct: 585 DVTCTRFHPNSNYVATGSSDRTVRLWDVLN 614
Score = 133 (51.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 292 CSYSH-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C+ H + N +AT S V++W + GH + FSP +A+ S D
Sbjct: 588 CTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG 647
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
LW+ G ++ +GH + + F G+ + + S D T RLWDV ++
Sbjct: 648 RVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAID 701
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 399 DTGVELLLQEGHSRSVYGIAFH 420
D ELLL HS+S I H
Sbjct: 719 DNSQELLLGTYHSKSTAVIHLH 740
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 79/274 (28%), Positives = 139/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P + V ++S D T R+W+
Sbjct: 233 DTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWS 292
Query: 357 T-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
+ S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 352
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 413 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 469
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 503
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/196 (23%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D + L +GH++ V + FHP L S DA R+W +
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 298
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 359 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 418 LWDLRKLKNFKTLQLD 433
Score = 201 (75.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 59/249 (23%), Positives = 110/249 (44%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + +L+ ++S ++IWS+P ++ H T ++
Sbjct: 259 TLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 318
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 437
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 438 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 -DRSLKFYS 503
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 349 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 408
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 409 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 464
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 465 WTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 37 (18.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 84/234 (35%), Positives = 117/234 (50%)
Query: 336 FSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWR 394
FSP + T+S D +W T G LL GH + F P G+ + ++S D + R
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIR 93
Query: 395 LWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK 454
LWDV L + +GH RSV ++F PD AS G D A VW++++GR + L GH
Sbjct: 94 LWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCD 153
Query: 455 PVLGISFSPNGYHLATGGEDNTCRIWDLRKRK---SLYVIPAHSNLISQVKFEPQEGYFL 511
+ FSP LATG D+T IWDLR S + + H+ IS + + G L
Sbjct: 154 SIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSAS-G-LL 211
Query: 512 VTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+GS+D T+ VW L L GH V SL PDE +A+ + R +K+W
Sbjct: 212 ASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
Score = 300 (110.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 75/250 (30%), Positives = 117/250 (46%)
Query: 292 CS-YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
CS +S DG L T+S G V +W + L GH FSP +A+SS+D
Sbjct: 31 CSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDH 90
Query: 351 TARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ RLW+ S L+ +GH + ++F P K L + +DK +W+V +G + L G
Sbjct: 91 SIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVG 150
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA---LEGHVKPVLGISFSPNGY 466
H S+ F P A+ D+ +WDLR +++ LEGH + + +S +G
Sbjct: 151 HCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL 210
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
LA+G D T +W + H+ ++ + F P E L + Y TVKVW
Sbjct: 211 -LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDE-LKLASAGYSRTVKVWDCL 268
Query: 527 DFKLVKSLSG 536
K +++L G
Sbjct: 269 TGKCLETLKG 278
Score = 294 (108.6 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 71/237 (29%), Positives = 113/237 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ C +S DG L+A+SS +++W + R + LKGH V+FSP S
Sbjct: 65 AGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ 124
Query: 343 VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ D+ A +W G ++ GH D + F P+ L T S+D T +WD+
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAS 184
Query: 402 VELLLQ---EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
++ EGH+ ++ + + G L AS D VW T L L+GH V
Sbjct: 185 TPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNS 243
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
++FSP+ LA+ G T ++WD K L + ++ F P +G LV+G+
Sbjct: 244 LAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTP-DGKLLVSGA 299
Score = 257 (95.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/210 (32%), Positives = 100/210 (47%)
Query: 365 FQG-HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
F G H + AF P G+ L T S D +W +G L GH V F PDG
Sbjct: 21 FYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDG 80
Query: 424 SLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
L AS D R+WD+ + + L+GH + V +SFSP+ LA+GG D +W+++
Sbjct: 81 RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Query: 484 KRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS---LSGHEAK 540
+ ++++ H + I F P L TGS+D TV +W R V S L GH
Sbjct: 141 SGRRVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199
Query: 541 VTSLDIHPDEQSIATVSHDRWIKLWS-TRN 569
++ L + +A+ S D+ I +W T N
Sbjct: 200 ISCL-CYSASGLLASGSWDKTICVWKPTTN 228
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/117 (23%), Positives = 55/117 (47%)
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
+FSP+G L T +D +W + + L+ + H + F P +G + + S D +
Sbjct: 33 AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP-DGRLIASSSSDHS 91
Query: 520 VKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+++W K + L GH+ V ++ PD + +A+ D+ +W ++ H +
Sbjct: 92 IRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLL 148
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 83/281 (29%), Positives = 137/281 (48%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+ +D LL ++S G + IW K A+ + ++P N+VA D
Sbjct: 63 WGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ GH L+ F + + T+S D T LWD++T +
Sbjct: 123 IYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIV-TSSGDTTCALWDIETAQQTTTFT 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GHS V ++ PD S DA +++WD+R G + GHV + +SF PNGY
Sbjct: 182 GHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAF 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
ATG +D TCR++DLR + L ++ +H N+I + V F + G L+ G D VW
Sbjct: 242 ATGSDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDT 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++++W+
Sbjct: 300 LKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 260 (96.6 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 68/241 (28%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F S + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQ-IVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + TF GH + ++ P + + + D + +LWD+ G+
Sbjct: 162 GDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQS 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + ++F P+G A+ DA R++DLR + +L L H + GI+ FS
Sbjct: 222 FTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +++W
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLRIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 220 (82.5 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D ++ TSS +W + Q+ + GH+ ++ SP + +
Sbjct: 146 LSCCRFLDDSQIV-TSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +++LW+ DG +F GH+ + ++F P+G T S D T RL+D+ ELLL
Sbjct: 205 DASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
H + GI AF G L + D VWD G L GH V + + +
Sbjct: 265 S-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDD 323
Query: 465 GYHLATGGEDNTCRIWD 481
G +ATG D+ RIW+
Sbjct: 324 GMAVATGSWDSFLRIWN 340
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 59/228 (25%), Positives = 99/228 (43%)
Query: 345 TSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
TS+ D R+ T +GHL ++ M + + L + S D +WD T ++
Sbjct: 34 TSNMDSVGRI---QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKM 90
Query: 405 LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGIS 460
S V A+ P G+ A GLD + +++L+T G R L GH +
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
F + + T D TC +WD+ + HS + + P F V+G+ D +
Sbjct: 151 FLDDS-QIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTF-VSGACDASS 208
Query: 521 KVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
K+W RD +S +GH + + ++ P+ + AT S D +L+ R
Sbjct: 209 KLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLR 256
Score = 186 (70.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 46/165 (27%), Positives = 80/165 (48%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G ++
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I++L+ R+ ++ V +P H+ +S +F +VT S D T +W
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQ--IVTSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + +GH V SL + PD ++ + + D KLW R+
Sbjct: 171 IETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRD 215
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 42/174 (24%), Positives = 66/174 (37%)
Query: 269 ALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHT 328
AL +E+ T +G + S S D + + K+W + + GH
Sbjct: 167 ALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHV 226
Query: 329 ERATDVTFSPVSNHVATSSADRTARLWNTDGS---LLNTFQGHLDRLARMAFHPSGKYLG 385
V+F P AT S D T RL++ LL + + + +AF SG+ L
Sbjct: 227 SDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLL 286
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
D +WD G + GH V + DG A+ D+ R+W+
Sbjct: 287 AGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 79/274 (28%), Positives = 138/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P V ++S D T R+W+
Sbjct: 233 DTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292
Query: 357 T-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
+ S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 352
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 413 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 469
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 503
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/196 (23%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D + L +GH++ V + FHP L S DA R+W +
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC 298
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 359 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 418 LWDLRKLKNFKTLQLD 433
Score = 200 (75.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + L+ ++S ++IWS+P ++ H T ++
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 318
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 437
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 438 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 -DRSLKFYS 503
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 349 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 408
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 409 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 464
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 465 WTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 37 (18.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 79/274 (28%), Positives = 138/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P V ++S D T R+W+
Sbjct: 233 DTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292
Query: 357 T-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
+ S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 352
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 413 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 469
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 470 HFTEHSGVTTGVAFGHHAKFIASTGMDRSLKFYS 503
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/196 (23%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D + L +GH++ V + FHP L S DA R+W +
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC 298
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 359 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 418 LWDLRKLKNFKTLQLD 433
Score = 197 (74.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 58/249 (23%), Positives = 109/249 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + L+ ++S ++IWS+P ++ H T ++
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 318
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 437
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS + + V F + TG
Sbjct: 438 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGVTTGVAFGHHAKFIASTGM 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 -DRSLKFYS 503
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 349 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 408
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 409 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 464
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 465 WTEILHFTEHSGVTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 37 (18.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 350 (128.3 bits), Expect = 6.9e-32, P = 6.9e-32
Identities = 79/274 (28%), Positives = 138/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P V ++S D T R+W+
Sbjct: 242 DTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 301
Query: 357 T-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
+ S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 302 VPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 361
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 362 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 421
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 422 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 478
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 479 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 512
Score = 202 (76.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 47/196 (23%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D + L +GH++ V + FHP L S DA R+W +
Sbjct: 248 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC 307
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 308 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 367
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 368 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 426
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 427 LWDLRKLKNFKTLQLD 442
Score = 200 (75.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + L+ ++S ++IWS+P ++ H T ++
Sbjct: 268 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 327
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 328 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 387
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 388 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 446
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 447 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 504
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 505 -DRSLKFYS 512
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 358 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 417
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 418 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 473
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 474 WTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 513
Score = 37 (18.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 27 SPVSNHV 33
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 287 (106.1 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 27 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 85
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 86 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 144
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 145 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 204
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 205 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 261
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 262 TGMCLMTLVGHDNWVR 277
Score = 238 (88.8 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 40 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 99
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 100 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 159
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 160 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 219
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 220 APESSYSSISEATGSE 235
Score = 231 (86.4 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 16 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 71
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 72 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 131
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 132 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 190
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 191 QTVRVWVVATK 201
Score = 187 (70.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 175 (66.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 345
Score = 175 (66.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 73 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 132
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 133 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 192
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 193 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 227
Score = 164 (62.8 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 301
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 302 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 213 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 271
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 272 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 331
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 332 TGSVDQTVKVWECR 345
Score = 102 (41.0 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 234 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 293
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 294 DKTLRVWDYKNK 305
Score = 74 (31.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 106 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 165
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 166 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 351 (128.6 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 79/227 (34%), Positives = 112/227 (49%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L +SS G V++WS+
Sbjct: 277 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 335
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + F
Sbjct: 336 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 395
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ + F P+G A+ D +
Sbjct: 396 HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL 455
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
WD+ G + L+GH V + FS +G LA+G DNT R+WD K
Sbjct: 456 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
Score = 297 (109.6 bits), Expect = 6.3e-24, P = 6.3e-24
Identities = 69/238 (28%), Positives = 112/238 (47%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
+ L + D +L+ S + +I + L GH+ +FSP N++ +S
Sbjct: 262 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 321
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T RLW+ + L ++GH + F P G Y + D+ RLW D L
Sbjct: 322 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 381
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ GH V FHP+ + A+ D R+WD+ G + GH P+ ++FSPNG
Sbjct: 382 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 441
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
LATG D +WD+ + + H++ + ++F ++G L +GS D TV++W
Sbjct: 442 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 498
Score = 295 (108.9 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 72/251 (28%), Positives = 116/251 (46%)
Query: 315 MPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLAR 374
+P + ++ L + + T V + S+ +A AD T R+W+ L + + D
Sbjct: 217 LPSICFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADL--- 273
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ S D R+ D T EL + GHS VYG +F PD + S D
Sbjct: 274 -------SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 326
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
R+W L+T ++ +GH PV FSP GY+ +GG D R+W + L + H
Sbjct: 327 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 386
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ +F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +A
Sbjct: 387 LADVNCTRFHPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 445
Query: 555 TVSHDRWIKLW 565
T + D + LW
Sbjct: 446 TGATDGRVLLW 456
Score = 288 (106.4 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 81/278 (29%), Positives = 126/278 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +L+A V++WS+ +K ++K +A D++ + S
Sbjct: 233 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVK----QAADLSL------IDKESD 281
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL ++S D T RLW + T L+
Sbjct: 282 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 341
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V F PN +
Sbjct: 342 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 401
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 402 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGH 460
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH V SL D + +A+ S D ++LW
Sbjct: 461 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Score = 235 (87.8 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 60/180 (33%), Positives = 88/180 (48%)
Query: 390 DKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
D T R+W V T +L RSV A D SL D L R+ D +T + L
Sbjct: 251 DSTVRVWSV-TPKKL-------RSVKQAA---DLSLIDKESDDVLERIMDEKTASELKIL 299
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
GH PV G SFSP+ +L + ED T R+W L+ L H+ + +F P GY
Sbjct: 300 YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY-GY 358
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ V+G +D ++W+ ++ ++ +GH A V HP+ +AT S DR ++LW N
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 418
Score = 147 (56.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 36/127 (28%), Positives = 55/127 (43%)
Query: 292 CSYSH-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C+ H + N +AT S V++W + GH +TFSP +AT + D
Sbjct: 392 CTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG 451
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
LW+ G ++ +GH D + + F G+ L + S D T RLWD E L +
Sbjct: 452 RVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDN 511
Query: 410 HSRSVYG 416
+ G
Sbjct: 512 SQELLLG 518
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 78/258 (30%), Positives = 131/258 (50%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLD 370
KI +Q +KG E A + ++ V + A++ W+ +L+ GHL
Sbjct: 105 KIAGQVSMQSLEKIKGVPEAAHRIAGESQASLVKRTLAEQIRPEWHAPWTLMRVISGHLG 164
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + P ++ T + D+T ++WD+ +GV L GH +V G+A P SCG
Sbjct: 165 WVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCG 224
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
D + + WDL T + I GH+ V + P L T G D R+WD+R R++++V
Sbjct: 225 EDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHV 284
Query: 491 IPAHSNLISQV---KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIH 547
+ H + ++ + +F+PQ +VTGS D T+++W K + +L+ H+ V +L +H
Sbjct: 285 LSGHKSTVASLAVQEFDPQ----VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLH 340
Query: 548 PDEQSIATVSHDRWIKLW 565
PDE + A+ S D IK W
Sbjct: 341 PDEFTFASGSSDN-IKHW 357
Score = 311 (114.5 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 71/238 (29%), Positives = 112/238 (47%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W++ R+ + GH V P + T + DRT ++W+ G L T GH+
Sbjct: 153 WTLMRV-----ISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIAT 207
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ +A P YL + DK + WD++T + GH VY + HP + + G
Sbjct: 208 VRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGR 267
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
DA+ARVWD+RT +++ L GH V ++ + TG D+T R+WDL K+L +
Sbjct: 268 DAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTL 327
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
H + + P E F +GS D +K W + + + GH A V +L I+ D
Sbjct: 328 THHKKTVRALSLHPDEFTF-ASGSSD-NIKHWKFPEGAFMGNFEGHNAIVNTLSINSD 383
Score = 207 (77.9 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 54/246 (21%), Positives = 102/246 (41%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T + +KIW + L GH + SP ++ + D+
Sbjct: 168 CVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDK 227
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T D R+WD+ T + + G
Sbjct: 228 MVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSG 287
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H +V +A + +D+ R+WDL G+++ L H K V +S P+ + A
Sbjct: 288 HKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFA 347
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW-SGRDF 528
+G DN + W + + H+ +++ + F + M W SG +
Sbjct: 348 SGSSDNI-KHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHKY 406
Query: 529 KLVKSL 534
+ ++S+
Sbjct: 407 QELQSV 412
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 61/259 (23%), Positives = 105/259 (40%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + G + S L + +VK W + + GH +
Sbjct: 197 LKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLH 256
Query: 338 PVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P + + T+ D AR+W+ ++ GH +A +A + T S D T RLW
Sbjct: 257 PTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLW 316
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D+ G L H ++V ++ HPD AS D + W G + EGH V
Sbjct: 317 DLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKH-WKFPEGAFMGNFEGHNAIV 375
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLR---KRKSLYVIPAHSNLISQV-----KFEPQEG 508
+S + + + +G ++ + WD + K + L + +L S+ F+ + G
Sbjct: 376 NTLSINSDNV-MFSGADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFD-KTG 433
Query: 509 YFLVTGSYDMTVKVWSGRD 527
L+T D +VK++ D
Sbjct: 434 LRLITCEADKSVKIYKQVD 452
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 32/128 (25%), Positives = 52/128 (40%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V + P TG D T +IWDL + H + + P+
Sbjct: 159 ISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHP 218
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V +L +HP + T D ++W R
Sbjct: 219 YLFSCGE-DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMR 277
Query: 569 NKGDEHAM 576
+ + H +
Sbjct: 278 TRQNVHVL 285
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 84/286 (29%), Positives = 136/286 (47%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNH 342
G ++ S +G LAT+S + +W+ P + + + GH + T V FSP N
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGNL 74
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A++S DRT RLW D + F+ H + + F G++L T S DK+ ++W +
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 134
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L H+ V F PDG L SC D ++WD + + V + F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDF 194
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
+P+G +A+ G D T ++WD+R K L HS ++ + F P + Y LVT S D T+K
Sbjct: 195 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY-LVTASSDGTLK 253
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ + +L+ +L GH V ++ + A+ D + LW T
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 292 (107.8 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 67/220 (30%), Positives = 106/220 (48%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L F+GH + + P+GK L T S+D LW+ GH V +
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Query: 418 AFHPDGSLAASCGLDALARVW--DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
F P G+L AS D R+W D R G+ + H PV + FS +G LAT ED
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKR-GK-FSEFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
+ ++W + +++ LY + H++ + KF P +G +V+ S D T+K+W + + V + S
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
+D +P IA+ D+ +K+W R NK +H
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 223
Score = 292 (107.8 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 73/250 (29%), Positives = 111/250 (44%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLAR 374
P L+++ KGH T + SP +AT+S D LWN + + GH D +
Sbjct: 8 PVLERY--FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F P G L + S D+T RLW D + + H+ V + F DG A+ D
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + R + +L H V FSP+G + + ED T +IWD ++ +
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V F P G + + D TVKVW R KL++ H V + HP + +
Sbjct: 186 VGFANFVDFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLV 244
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 245 TASSDGTLKI 254
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/274 (28%), Positives = 137/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P V ++S D T R+W+
Sbjct: 233 DTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292
Query: 357 TDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 352
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 413 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 469
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 503
Score = 204 (76.9 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 48/196 (24%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D T L +GH++ V + FHP L S DA R+W +
Sbjct: 239 TGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSC 298
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 359 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 418 LWDLRKLKNFKTLQLD 433
Score = 200 (75.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + L+ ++S ++IWS+P ++ H T ++
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATG 318
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 437
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 438 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 -DRSLKFYS 503
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 349 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 408
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 409 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 464
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 465 WTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 37 (18.1 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/274 (28%), Positives = 137/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P V ++S D T R+W+
Sbjct: 233 DTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292
Query: 357 TDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 352
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 413 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 469
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 503
Score = 204 (76.9 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 48/196 (24%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D T L +GH++ V + FHP L S DA R+W +
Sbjct: 239 TGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSC 298
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 359 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 418 LWDLRKLKNFKTLQLD 433
Score = 200 (75.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + L+ ++S ++IWS+P ++ H T ++
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATG 318
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 437
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 438 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 -DRSLKFYS 503
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 349 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 408
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 409 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 464
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 465 WTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 37 (18.1 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/274 (28%), Positives = 137/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGHT++ T V F P V ++S D T R+W+
Sbjct: 233 DTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292
Query: 357 TDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
S + + H + ++ H +G YL ++S D+ W D+ TG L + E S
Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCS 352
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 353 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 413 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 469
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 470 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 503
Score = 204 (76.9 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 48/196 (24%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D T L +GH++ V + FHP L S DA R+W +
Sbjct: 239 TGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSC 298
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + ++ ++ +F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 359 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 418 LWDLRKLKNFKTLQLD 433
Score = 200 (75.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + L+ ++S ++IWS+P ++ H T ++
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATG 318
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLD--RLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L L FHP G GT + D ++WD
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 437
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 438 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 495
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 496 -DRSLKFYS 503
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 290 SGCSYS----H-DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
SGCS + H DG + T ++ +KIW + + GH+ T + FS ++A
Sbjct: 349 SGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLA 408
Query: 345 TSSADRTARLWNTDGSLLNTFQG-HLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
T++ D + +LW D L F+ LD + + F SG YL D +++
Sbjct: 409 TAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQ 464
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
E+L HS G+AF AS G+D + + L
Sbjct: 465 WTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 37 (18.1 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 85/274 (31%), Positives = 134/274 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN- 356
GNL T + V ++ + Q KGH ++ V P + ++SAD R+W+
Sbjct: 221 GNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSA 280
Query: 357 TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL---LQEGHSRS 413
TD S H + ++ + SG Y+ + S D W D+ +G L ++ G +
Sbjct: 281 TDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIA 340
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
V+ I FHPDG + + DA+ ++WDL+ A GH V I+FS NGY+LATG E
Sbjct: 341 VHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSE 400
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D ++WDLRK K+L I+ + F+ G FL G V+V + + V
Sbjct: 401 DGEVKLWDLRKLKNLKTFANEEKQPINSLSFD-MTGTFLGIGG--QKVQVLHVKSWSEVV 457
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
SLS H VT + + +S+ T S D+ ++++S
Sbjct: 458 SLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
Score = 227 (85.0 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 53/186 (28%), Positives = 87/186 (46%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DKT L+D + + +GH++ + + HPD A S D+ RVW S
Sbjct: 226 TGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSS 285
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI---PAHSNLISQVK 502
++ H PV IS + +G ++ + +D+ D+R KSL + P + ++
Sbjct: 286 KAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIE 345
Query: 503 FEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWI 562
F P +G TG+ D VK+W ++ + + GH A V S+ + +AT S D +
Sbjct: 346 FHP-DGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEV 404
Query: 563 KLWSTR 568
KLW R
Sbjct: 405 KLWDLR 410
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 56/235 (23%), Positives = 104/235 (44%)
Query: 296 HDGNLLATS-SLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARL 354
H N+ A S S +++WS + + H TD++ + +++ ++S D
Sbjct: 260 HPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAF 319
Query: 355 WNT-DGSLL---NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
+ G L + G + + FHP G GT + D ++WD+ GH
Sbjct: 320 SDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGH 379
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK-PVLGISFSPNGYHLA 469
+ +V IAF +G A+ D ++WDLR +++ K P+ +SF G L
Sbjct: 380 TAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLG 439
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
GG+ ++ ++ + + HS ++ V+F + LVT S D +++V+S
Sbjct: 440 IGGQK--VQVLHVKSWSEVVSLSDHSGPVTGVRFG-ENARSLVTCSLDKSLRVFS 491
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 44/171 (25%), Positives = 73/171 (42%)
Query: 270 LKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTE 329
++ +SL E G + + DG + T + VVKIW + +A GHT
Sbjct: 322 IRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTA 381
Query: 330 RATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDR-LARMAFHPSGKYLGTT 387
+ FS ++AT S D +LW+ L TF + + ++F +G +LG
Sbjct: 382 AVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGIG 441
Query: 388 SFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
K ++ V + E++ HS V G+ F + +C LD RV+
Sbjct: 442 G-QKV-QVLHVKSWSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVF 490
Score = 145 (56.1 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 38/164 (23%), Positives = 67/164 (40%)
Query: 410 HSRSVYGI-AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
HS GI A G+L+ + G+D ++D + + +GH K + + P+
Sbjct: 207 HSTGTPGITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITA 266
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTG--SYDMTVKVWSGR 526
+ D+ R+W S +I H ++ + Y L SY + SG+
Sbjct: 267 ISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGK 326
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
V G + V S++ HPD T + D +K+W +N+
Sbjct: 327 SLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQ 370
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 346 (126.9 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 84/277 (30%), Positives = 138/277 (49%)
Query: 295 SHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARL 354
S D + + T +++ Q + LKGHT++ T V + P + V T S D R+
Sbjct: 232 SADHSKILTGGNDKNATVFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDMNIRI 291
Query: 355 WNTDGSLLNTF-QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRS 413
W+ S + H + ++ HP+G YL +TS DK W D+ TG LL + +
Sbjct: 292 WHVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTG-RLLTKVIDTAE 350
Query: 414 VYGIA---FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
V G+ FHPDG + + +D+ ++WDL+ ++ GH P+ ISFS NGY+LAT
Sbjct: 351 V-GLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLAT 409
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
+D ++WDLRK K+ I + + F+ Y + GS V+V+ + ++
Sbjct: 410 AADDACVKLWDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGS---DVRVYLCKQWQ 466
Query: 530 LVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+K + H A T + Q +A+ S DR +KL++
Sbjct: 467 ELKVFNDHTALATGVRFGKHAQYLASTSMDRTLKLYA 503
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 48/191 (25%), Positives = 90/191 (47%)
Query: 390 DKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
DK +++ DT + + +GH++ + + +HP+ + D R+W + T ++ L L
Sbjct: 244 DKNATVFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLL 303
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY-VIPAHSNLISQVKFEPQEG 508
H PV G+S P G +L + D D+R + L VI ++ +F P +G
Sbjct: 304 RCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHP-DG 362
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
TG+ D VK+W ++ V + GH ++++ + +AT + D +KLW R
Sbjct: 363 LIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDLR 422
Query: 569 NKGDEHAMDVD 579
+ + +D
Sbjct: 423 KLKNFKTIQLD 433
Score = 200 (75.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 59/244 (24%), Positives = 112/244 (45%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G + ++ Y + + + T S ++IW +P Q L+ H T ++ P +++
Sbjct: 263 GHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGDYL 322
Query: 344 ATSSADRTARLWNT-DGSLLNTFQGHLD-RLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
++S+D+ + G LL + L FHP G GT + D ++WD+
Sbjct: 323 LSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQ 382
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE-GHVKPVLGIS 460
+ GH+ + I+F +G A+ DA ++WDLR ++ ++ V +
Sbjct: 383 SNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFKTIQLDDGYEVKDLC 442
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
F +G +LA G D R++ ++ + L V H+ L + V+F Y L + S D T+
Sbjct: 443 FDQSGTYLAIAGSD--VRVYLCKQWQELKVFNDHTALATGVRFGKHAQY-LASTSMDRTL 499
Query: 521 KVWS 524
K+++
Sbjct: 500 KLYA 503
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 41/165 (24%), Positives = 69/165 (41%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
+D E G L+ + DG + T ++ VKIW + + GHT + ++FS
Sbjct: 346 IDTAEVG----LTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFS 401
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQG-HLD---RLARMAFHPSGKYLGTTSFDKTW 393
++AT++ D +LW D L F+ LD + + F SG YL D
Sbjct: 402 ENGYYLATAADDACVKLW--DLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGSDV-- 457
Query: 394 RLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
R++ EL + H+ G+ F AS +D +++
Sbjct: 458 RVYLCKQWQELKVFNDHTALATGVRFGKHAQYLASTSMDRTLKLY 502
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK-GHTERATDVTFSPVSNH 342
G P+S S+S +G LAT++ VK+W + +L+ F ++ D+ F +
Sbjct: 390 GHTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFKTIQLDDGYEVKDLCFDQSGTY 449
Query: 343 VATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+A + +D L L F H + F +YL +TS D+T +L+ ++
Sbjct: 450 LAIAGSDVRVYLCK-QWQELKVFNDHTALATGVRFGKHAQYLASTSMDRTLKLYAIE 505
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 83/286 (29%), Positives = 136/286 (47%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNH 342
G ++ S +G LAT+S + +W+ P + + + GH + T V FSP N
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGNL 74
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A++S DRT RLW D + F+ H + + F G++L T S DK+ ++W +
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 134
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L H+ V F PDG L SC D ++WD + + V + F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDF 194
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
+P+G +A+ G D T ++WD+R K L HS ++ + F P G +L+T S D T+K
Sbjct: 195 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS-GNYLITASSDGTLK 253
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ + +L+ +L GH V ++ + A+ D + LW T
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 292 (107.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 67/220 (30%), Positives = 106/220 (48%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L F+GH + + P+GK L T S+D LW+ GH V +
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Query: 418 AFHPDGSLAASCGLDALARVW--DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
F P G+L AS D R+W D R G+ + H PV + FS +G LAT ED
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKR-GK-FSEFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
+ ++W + +++ LY + H++ + KF P +G +V+ S D T+K+W + + V + S
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
+D +P IA+ D+ +K+W R NK +H
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 223
Score = 287 (106.1 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 73/250 (29%), Positives = 110/250 (44%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLAR 374
P L+++ KGH T + SP +AT+S D LWN + + GH D +
Sbjct: 8 PVLERY--FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F P G L + S D+T RLW D + + H+ V + F DG A+ D
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + R + +L H V FSP+G + + ED T +IWD ++ +
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V F P G + + D TVKVW R KL++ H V + HP +
Sbjct: 186 VGFANFVDFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLI 244
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 245 TASSDGTLKI 254
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 344 (126.2 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 77/274 (28%), Positives = 139/274 (50%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D N + T V ++ Q + LKGH+++ T V F P + V ++S D T R+W+
Sbjct: 234 DTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWS 293
Query: 357 T-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL--LLQEGHSRS 413
+ S + + H + ++ H +G YL ++S D+ W D+ TG L + E +
Sbjct: 294 VPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCA 353
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ FHPDG + + +D+ ++WDL+ ++ GH P+ I+FS NGY+LAT +
Sbjct: 354 LTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAAD 413
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNL-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVK 532
D++ ++WDLRK K+ + +N + + F+ Q G +L G D V+++ + + +
Sbjct: 414 DSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFD-QSGTYLALGGTD--VQIYICKQWTEIL 470
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ H T + + IA+ DR +K +S
Sbjct: 471 HFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYS 504
Score = 207 (77.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
T DK ++D + L +GHS+ V + FHP L S DA R+W +
Sbjct: 240 TGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 299
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN--LISQVKF 503
+ + H V G+S G +L + +D D++ + L + S+ ++ +F
Sbjct: 300 VQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQF 359
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
P +G TG+ D +K+W ++ V + GH +TS+ + +AT + D +K
Sbjct: 360 HP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 418
Query: 564 LWSTRNKGDEHAMDVD 579
LW R + + +D
Sbjct: 419 LWDLRKLKNFKTLQLD 434
Score = 201 (75.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 60/249 (24%), Positives = 112/249 (44%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G + ++ + +L+ ++S ++IWS+P ++ H T ++
Sbjct: 260 TLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATG 319
Query: 341 NHVATSSADRTARLWNTD-GSLLN--TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
+++ +SS D+ + G +L T + L FHP G GT + D ++WD
Sbjct: 320 DYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWD 379
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI--LALEGHVKP 455
+ + GHS + IAF +G A+ D+ ++WDLR ++ L L+ + +
Sbjct: 380 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFE- 438
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + F +G +LA GG D +I+ ++ + HS L + V F + TG
Sbjct: 439 VKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGM 496
Query: 516 YDMTVKVWS 524
D ++K +S
Sbjct: 497 -DRSLKFYS 504
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 45/186 (24%), Positives = 79/186 (42%)
Query: 261 SIDDEIDYALKKVES--LYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
S DD+ +A +++ + T+ L+ + DG + T ++ +KIW +
Sbjct: 325 SSDDQY-WAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKER 383
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQG-HLDR---LAR 374
+ GH+ T + FS ++AT++ D + +LW D L F+ LD +
Sbjct: 384 TNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW--DLRKLKNFKTLQLDNNFEVKS 441
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F SG YL D +++ E+L HS G+AF AS G+D
Sbjct: 442 LIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRS 499
Query: 435 ARVWDL 440
+ + L
Sbjct: 500 LKFYSL 505
Score = 37 (18.1 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 337 SPVSNHV 343
SPVSNHV
Sbjct: 18 SPVSNHV 24
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFAGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L V +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMVY-SHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDALKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 279 (103.3 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 70/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI+ FS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 211 (79.3 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 59/198 (29%), Positives = 94/198 (47%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL++
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI AF G L + D VWD L+ R+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ +IW+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + +++L+T G R L GH + F + + T D TC +
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + H+ + + P F V+G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+ ++ P+ + AT S D +L+ R D+ M
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLR--ADQELM 262
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 42/187 (22%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLL-NTFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
+AF SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 352 (129.0 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 84/262 (32%), Positives = 123/262 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L + S G V++WS+
Sbjct: 497 DKESDDVLERIMDEKTASELKILY-GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTF 555
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + F
Sbjct: 556 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRF 615
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ +AF P+G A+ D +
Sbjct: 616 HPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLL 675
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+ G + L+GH + + FS +G LA+G DNT R+WD K +
Sbjct: 676 WDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTA 735
Query: 498 ISQVKFEPQEGYFLVTGSYDMT 519
+ P+ L+ G+Y MT
Sbjct: 736 TGHINL-PENSQDLLLGTY-MT 755
Score = 298 (110.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 74/244 (30%), Positives = 114/244 (46%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSG 381
+A +G T A D+T S+ + AD T R+W+ L + + D
Sbjct: 448 NAYQGLT--AVDITDD--SSMIVGGFADSTVRVWSVTPKKLRSVKAAADL---------- 493
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ S D R+ D T EL + GHS VYG +F PD + SC D R+W L+
Sbjct: 494 SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQ 553
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T ++ +GH PV FSP GY+ +GG D R+W + L + H ++
Sbjct: 554 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 613
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
+F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +AT + D
Sbjct: 614 RFHPNSNY-IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGR 672
Query: 562 IKLW 565
+ LW
Sbjct: 673 VLLW 676
Score = 277 (102.6 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 77/278 (27%), Positives = 123/278 (44%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +++ V++WS+ +K ++K A D++ + S
Sbjct: 453 LTAVDITDDSSMIVGGFADSTVRVWSVTP-KKLRSVKA----AADLSL------IDKESD 501
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL + S D T RLW + T L+
Sbjct: 502 DVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGY 561
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V F PN +
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 621
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 622 IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN-GRFLATGATDGRVLLWDIGH 680
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH + +L D + +A+ S D ++LW
Sbjct: 681 GLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLW 718
Score = 240 (89.5 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 62/180 (34%), Positives = 89/180 (49%)
Query: 390 DKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
D T R+W V T +L RSV A D SL D L R+ D +T + L
Sbjct: 471 DSTVRVWSV-TPKKL-------RSVKAAA---DLSLIDKESDDVLERIMDEKTASELKIL 519
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
GH PV G SFSP+ +L + ED T R+W L+ L H+ + +F P GY
Sbjct: 520 YGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY-GY 578
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ V+G +D ++W+ ++ ++ +GH A VT HP+ IAT S DR ++LW N
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLN 638
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 352 (129.0 bits), Expect = 3.5e-31, P = 3.5e-31
Identities = 85/262 (32%), Positives = 123/262 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L +SS G V++WS+
Sbjct: 515 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 573
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + F
Sbjct: 574 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 633
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ + F P+G A+ D +
Sbjct: 634 HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL 693
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+ G + L+GH V + FS +G LA+G DNT R+WD K +
Sbjct: 694 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTA 753
Query: 498 ISQVKFEPQEGYFLVTGSYDMT 519
+ P+ L+ G+Y MT
Sbjct: 754 TGHINL-PENSQELLLGTY-MT 773
Score = 298 (110.0 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 69/238 (28%), Positives = 112/238 (47%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
+ L + D +L+ S + +I + L GH+ +FSP N++ +S
Sbjct: 500 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 559
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T RLW+ + L ++GH + F P G Y + D+ RLW D L
Sbjct: 560 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 619
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ GH V FHP+ + A+ D R+WD+ G + GH P+ ++FSPNG
Sbjct: 620 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 679
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
LATG D +WD+ + + H++ + ++F ++G L +GS D TV++W
Sbjct: 680 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 736
Score = 290 (107.1 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 77/244 (31%), Positives = 115/244 (47%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSG 381
+A +G T A DVT S+ +A AD T R+W+ L R + A S
Sbjct: 466 NAYQGLT--AVDVTDD--SSLIAGGFADSTVRVWSVTPKKL--------RSVKQASDLS- 512
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ S D R+ D T EL + GHS VYG +F PD + S D R+W L+
Sbjct: 513 -LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 571
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T ++ +GH PV FSP GY+ +GG D R+W + L + H ++
Sbjct: 572 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 631
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
+F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +AT + D
Sbjct: 632 RFHPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 690
Query: 562 IKLW 565
+ LW
Sbjct: 691 VLLW 694
Score = 289 (106.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 81/278 (29%), Positives = 127/278 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +L+A V++WS+ +K ++K +A+D++ + S
Sbjct: 471 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVK----QASDLSL------IDKESD 519
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL ++S D T RLW + T L+
Sbjct: 520 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 579
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V F PN +
Sbjct: 580 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 639
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 640 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGH 698
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH V SL D + +A+ S D ++LW
Sbjct: 699 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 736
Score = 233 (87.1 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
+ LN +QG L + + D T R+W V T +L RSV +
Sbjct: 463 TFLNAYQG----LTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKL-------RSVKQAS- 509
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
D SL D L R+ D +T + L GH PV G SFSP+ +L + ED T R+
Sbjct: 510 --DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 567
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
W L+ L H+ + +F P GY+ V+G +D ++W+ ++ ++ +GH A
Sbjct: 568 WSLQTFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 626
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
V HP+ +AT S DR ++LW N
Sbjct: 627 DVNCTRFHPNSNYVATGSADRTVRLWDVLN 656
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 352 (129.0 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 85/262 (32%), Positives = 123/262 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L +SS G V++WS+
Sbjct: 517 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + F
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 635
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ + F P+G A+ D +
Sbjct: 636 HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL 695
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+ G + L+GH V + FS +G LA+G DNT R+WD K +
Sbjct: 696 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTA 755
Query: 498 ISQVKFEPQEGYFLVTGSYDMT 519
+ P+ L+ G+Y MT
Sbjct: 756 TGHINL-PENSQELLLGTY-MT 775
Score = 297 (109.6 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 69/238 (28%), Positives = 112/238 (47%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
+ L + D +L+ S + +I + L GH+ +FSP N++ +S
Sbjct: 502 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T RLW+ + L ++GH + F P G Y + D+ RLW D L
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ GH V FHP+ + A+ D R+WD+ G + GH P+ ++FSPNG
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
LATG D +WD+ + + H++ + ++F ++G L +GS D TV++W
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 738
Score = 290 (107.1 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 75/244 (30%), Positives = 114/244 (46%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSG 381
+A +G T A DVT S+ +A AD T R+W+ L + + D
Sbjct: 468 NAYQGLT--AVDVTDD--SSLIAGGFADSTVRVWSVTPKKLRSVKQAADL---------- 513
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ S D R+ D T EL + GHS VYG +F PD + S D R+W L+
Sbjct: 514 SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T ++ +GH PV FSP GY+ +GG D R+W + L + H ++
Sbjct: 574 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
+F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +AT + D
Sbjct: 634 RFHPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 562 IKLW 565
+ LW
Sbjct: 693 VLLW 696
Score = 288 (106.4 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 81/278 (29%), Positives = 126/278 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +L+A V++WS+ +K ++K +A D++ + S
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVK----QAADLSL------IDKESD 521
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL ++S D T RLW + T L+
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V F PN +
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGH 700
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH V SL D + +A+ S D ++LW
Sbjct: 701 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 236 (88.1 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 65/210 (30%), Positives = 97/210 (46%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
+ LN +QG L + + D T R+W V T +L RSV A
Sbjct: 465 TFLNAYQG----LTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKL-------RSVKQAA- 511
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
D SL D L R+ D +T + L GH PV G SFSP+ +L + ED T R+
Sbjct: 512 --DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
W L+ L H+ + +F P GY+ V+G +D ++W+ ++ ++ +GH A
Sbjct: 570 WSLQTFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 628
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
V HP+ +AT S DR ++LW N
Sbjct: 629 DVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Score = 39 (18.8 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLS 307
S D P+SG S S + LAT S++
Sbjct: 159 SAPDPPVSGASGSAAVSGLATGSVA 183
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 352 (129.0 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 85/262 (32%), Positives = 123/262 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L +SS G V++WS+
Sbjct: 517 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + F
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 635
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ + F P+G A+ D +
Sbjct: 636 HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL 695
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+ G + L+GH V + FS +G LA+G DNT R+WD K +
Sbjct: 696 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTA 755
Query: 498 ISQVKFEPQEGYFLVTGSYDMT 519
+ P+ L+ G+Y MT
Sbjct: 756 TGHINL-PENSQELLLGTY-MT 775
Score = 298 (110.0 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 69/238 (28%), Positives = 112/238 (47%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
+ L + D +L+ S + +I + L GH+ +FSP N++ +S
Sbjct: 502 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T RLW+ + L ++GH + F P G Y + D+ RLW D L
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ GH V FHP+ + A+ D R+WD+ G + GH P+ ++FSPNG
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
LATG D +WD+ + + H++ + ++F ++G L +GS D TV++W
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 738
Score = 290 (107.1 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 77/244 (31%), Positives = 115/244 (47%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSG 381
+A +G T A DVT S+ +A AD T R+W+ L R + A S
Sbjct: 468 NAYQGLT--AVDVTDD--SSLIAGGFADSTVRVWSVTPKKL--------RSVKQASDLS- 514
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ S D R+ D T EL + GHS VYG +F PD + S D R+W L+
Sbjct: 515 -LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T ++ +GH PV FSP GY+ +GG D R+W + L + H ++
Sbjct: 574 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
+F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +AT + D
Sbjct: 634 RFHPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 562 IKLW 565
+ LW
Sbjct: 693 VLLW 696
Score = 289 (106.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 81/278 (29%), Positives = 127/278 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +L+A V++WS+ +K ++K +A+D++ + S
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVK----QASDLSL------IDKESD 521
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL ++S D T RLW + T L+
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V F PN +
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGH 700
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH V SL D + +A+ S D ++LW
Sbjct: 701 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 233 (87.1 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
+ LN +QG L + + D T R+W V T +L RSV +
Sbjct: 465 TFLNAYQG----LTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKL-------RSVKQAS- 511
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
D SL D L R+ D +T + L GH PV G SFSP+ +L + ED T R+
Sbjct: 512 --DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
W L+ L H+ + +F P GY+ V+G +D ++W+ ++ ++ +GH A
Sbjct: 570 WSLQTFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 628
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
V HP+ +AT S DR ++LW N
Sbjct: 629 DVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 352 (129.0 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 85/262 (32%), Positives = 123/262 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L +SS G V++WS+
Sbjct: 518 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 576
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + F
Sbjct: 577 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 636
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ + F P+G A+ D +
Sbjct: 637 HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL 696
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+ G + L+GH V + FS +G LA+G DNT R+WD K +
Sbjct: 697 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTA 756
Query: 498 ISQVKFEPQEGYFLVTGSYDMT 519
+ P+ L+ G+Y MT
Sbjct: 757 TGHINL-PENSQELLLGTY-MT 776
Score = 297 (109.6 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 69/238 (28%), Positives = 112/238 (47%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
+ L + D +L+ S + +I + L GH+ +FSP N++ +S
Sbjct: 503 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T RLW+ + L ++GH + F P G Y + D+ RLW D L
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ GH V FHP+ + A+ D R+WD+ G + GH P+ ++FSPNG
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
LATG D +WD+ + + H++ + ++F ++G L +GS D TV++W
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 739
Score = 290 (107.1 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 75/244 (30%), Positives = 114/244 (46%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSG 381
+A +G T A DVT S+ +A AD T R+W+ L + + D
Sbjct: 469 NAYQGLT--AVDVTDD--SSLIAGGFADSTVRVWSVTPKKLRSVKQAADL---------- 514
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ S D R+ D T EL + GHS VYG +F PD + S D R+W L+
Sbjct: 515 SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T ++ +GH PV FSP GY+ +GG D R+W + L + H ++
Sbjct: 575 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 634
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
+F P Y + TGS D TV++W + V+ +GH+ + SL P+ + +AT + D
Sbjct: 635 RFHPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 693
Query: 562 IKLW 565
+ LW
Sbjct: 694 VLLW 697
Score = 288 (106.4 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 81/278 (29%), Positives = 126/278 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +L+A V++WS+ +K ++K +A D++ + S
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVK----QAADLSL------IDKESD 522
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL ++S D T RLW + T L+
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 582
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V F PN +
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 642
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGH 701
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH V SL D + +A+ S D ++LW
Sbjct: 702 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 236 (88.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 65/210 (30%), Positives = 97/210 (46%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
+ LN +QG L + + D T R+W V T +L RSV A
Sbjct: 466 TFLNAYQG----LTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKL-------RSVKQAA- 512
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
D SL D L R+ D +T + L GH PV G SFSP+ +L + ED T R+
Sbjct: 513 --DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 570
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
W L+ L H+ + +F P GY+ V+G +D ++W+ ++ ++ +GH A
Sbjct: 571 WSLQTFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 629
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
V HP+ +AT S DR ++LW N
Sbjct: 630 DVNCTRFHPNSNYVATGSADRTVRLWDVLN 659
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 286 (105.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F +GK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHTGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + DI
Sbjct: 270 AELREHEHVVECISWAPESSYSTISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDIS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 241 (89.9 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 60/196 (30%), Positives = 96/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SP-NGYHL---ATGGE 473
+P + Y ATG E
Sbjct: 285 APESSYSTISEATGSE 300
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 59/191 (30%), Positives = 88/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 36/103 (34%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WD+ TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 177 (67.4 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 173 (66.0 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 44/153 (28%), Positives = 74/153 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGS 424
R+W V T + L+E H V I++ P+ S
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESS 289
Score = 165 (63.1 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQG 367
VV+ S +S + T T + P + + S D+T ++W+ + G L T G
Sbjct: 278 VVECISWAPESSYSTISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 101 (40.6 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDFKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 78/250 (31%), Positives = 118/250 (47%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L++ KGH + T V FS + H+A+ S D T +W+ S F GH D +
Sbjct: 9 PSLERH--FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG L + S DKT R+W + E + H+ +V + F DG L + D
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW R + +L H+ V FSP+G + + +D T ++WD R+ ++ H
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ V F P G + D TVKVW R +LV+ H A V +L HP +
Sbjct: 187 GGFVTYVDFHPS-GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 246 TASSDSTLKI 255
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 76/269 (28%), Positives = 123/269 (45%)
Query: 301 LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW--NTD 358
LA+ S+ + IW M + GH + T V FSP + +A+ S D+T R+W N
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
G F+ H + + F G+ L T S DKT ++W L H V
Sbjct: 94 GES-TVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAK 152
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
F PDG L S D ++WD + + + H V + F P+G +A G DNT +
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVK 212
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE 538
+WD R + + HS ++ + F P G +L+T S D T+K+ + +L+ +L GH+
Sbjct: 213 VWDTRTHRLVQHYQLHSAAVNALSFHPS-GNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Query: 539 AKVTSLDIHPDEQSIATVSHDRWIKLWST 567
T++ + A+ D + +W +
Sbjct: 272 GPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 304 (112.1 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 74/234 (31%), Positives = 118/234 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F + T+S D+T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE-G 409
++W+T L + H++ + F P G+ + + S DKT +LWD T E +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCE 185
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H V + FHP G+ A+ G+D +VWD RT R + + H V +SF P+G +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
T D+T +I DL + + LY + H + V F + G + +G D V VW
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVW 298
Score = 285 (105.4 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/211 (30%), Positives = 94/211 (44%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D SL F+GH D + + F + K+L + S D T +W + GH +V +
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P G L AS D R+W H V + F +G L T +D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W +++ L+ + H N + KF P +G +V+ S D TVK+W + V S H
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
VT +D HP IA D +K+W TR
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDTR 217
Score = 218 (81.8 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH +V + F + AS +D+ +W ++ GH V ++FSP+G+
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+G D T RIW + V AH+ + V F +G LVT S D TVKVWS
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF-CSDGQLLVTASDDKTVKVWSTHR 134
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
+ + SL+ H V PD + I + S D+ +KLW ++ H+
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/278 (30%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI---SFSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI SFS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 58/198 (29%), Positives = 93/198 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL+
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI +F G L + D VWD L+ R+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ +IW+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/248 (24%), Positives = 108/248 (43%)
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
D T S ++N++ D R+ T +GHL ++ M + + L + S D
Sbjct: 27 DATLSQITNNI-----DPVGRI---QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK 78
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILA 448
+WD T ++ S V A+ P G+ A GLD + +++L+T G R
Sbjct: 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L GH + F + + T D TC +WD+ + H+ + + P
Sbjct: 139 LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
F V+G+ D + K+W R+ ++ +GHE+ + ++ P+ + AT S D +L+ R
Sbjct: 198 LF-VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 569 NKGDEHAM 576
D+ M
Sbjct: 257 --ADQELM 262
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 41/187 (21%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLLN-TFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
++F SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/278 (30%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI---SFSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI SFS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 58/198 (29%), Positives = 93/198 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL+
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI +F G L + D VWD L+ R+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ +IW+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/248 (24%), Positives = 108/248 (43%)
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
D T S ++N++ D R+ T +GHL ++ M + + L + S D
Sbjct: 27 DATLSQITNNI-----DPVGRI---QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK 78
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILA 448
+WD T ++ S V A+ P G+ A GLD + +++L+T G R
Sbjct: 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L GH + F + + T D TC +WD+ + H+ + + P
Sbjct: 139 LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
F V+G+ D + K+W R+ ++ +GHE+ + ++ P+ + AT S D +L+ R
Sbjct: 198 LF-VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 569 NKGDEHAM 576
D+ M
Sbjct: 257 --ADQELM 262
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 41/187 (21%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLLN-TFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
++F SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/278 (30%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI---SFSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI SFS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 58/198 (29%), Positives = 93/198 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL+
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI +F G L + D VWD L+ R+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ +IW+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/248 (24%), Positives = 108/248 (43%)
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
D T S ++N++ D R+ T +GHL ++ M + + L + S D
Sbjct: 27 DATLSQITNNI-----DPVGRI---QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK 78
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILA 448
+WD T ++ S V A+ P G+ A GLD + +++L+T G R
Sbjct: 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L GH + F + + T D TC +WD+ + H+ + + P
Sbjct: 139 LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
F V+G+ D + K+W R+ ++ +GHE+ + ++ P+ + AT S D +L+ R
Sbjct: 198 LF-VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 569 NKGDEHAM 576
D+ M
Sbjct: 257 --ADQELM 262
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 41/187 (21%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLLN-TFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
++F SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/278 (30%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI---SFSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI SFS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 58/198 (29%), Positives = 93/198 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL+
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI +F G L + D VWD L+ R+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ +IW+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/248 (24%), Positives = 108/248 (43%)
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
D T S ++N++ D R+ T +GHL ++ M + + L + S D
Sbjct: 27 DATLSQITNNI-----DPVGRI---QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK 78
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILA 448
+WD T ++ S V A+ P G+ A GLD + +++L+T G R
Sbjct: 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L GH + F + + T D TC +WD+ + H+ + + P
Sbjct: 139 LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
F V+G+ D + K+W R+ ++ +GHE+ + ++ P+ + AT S D +L+ R
Sbjct: 198 LF-VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 569 NKGDEHAM 576
D+ M
Sbjct: 257 --ADQELM 262
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 41/187 (21%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLLN-TFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
++F SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/278 (30%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI---SFSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI SFS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 58/198 (29%), Positives = 93/198 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL+
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI +F G L + D VWD L+ R+ + L GH V + +
Sbjct: 265 S-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTD 322
Query: 464 NGYHLATGGEDNTCRIWD 481
+G +ATG D+ +IW+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 61/248 (24%), Positives = 108/248 (43%)
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
D T S ++N++ D R+ T +GHL ++ M + + L + S D
Sbjct: 27 DATLSQITNNI-----DPVGRI---QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK 78
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT--G--RSILA 448
+WD T ++ S V A+ P G+ A GLD + +++L+T G R
Sbjct: 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L GH + F + + T D TC +WD+ + H+ + + P
Sbjct: 139 LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
F V+G+ D + K+W R+ ++ +GHE+ + ++ P+ + AT S D +L+ R
Sbjct: 198 LF-VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 569 NKGDEHAM 576
D+ M
Sbjct: 257 --ADQELM 262
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 41/187 (21%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLLN-TFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
++F SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 349 (127.9 bits), Expect = 7.5e-31, P = 7.5e-31
Identities = 84/262 (32%), Positives = 123/262 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
D+ DD ++ + + + L G P+ G S+S D N L +SS G V++WS+
Sbjct: 518 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 576
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
KGH D FSP + + DR ARLW TD L F GHL + +
Sbjct: 577 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRY 636
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWDV G + + GH ++ + F P+G A+ D +
Sbjct: 637 HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL 696
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+ G + L+GH V + FS +G LA+G DNT R+WD K +
Sbjct: 697 WDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTA 756
Query: 498 ISQVKFEPQEGYFLVTGSYDMT 519
+ P+ L+ G+Y MT
Sbjct: 757 TGHINL-PENSQELLLGTY-MT 776
Score = 295 (108.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 68/238 (28%), Positives = 112/238 (47%)
Query: 287 RPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS 346
+ L + D +L+ S + +I + L GH+ +FSP N++ +S
Sbjct: 503 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D T RLW+ + L ++GH + F P G Y + D+ RLW D L
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ GH V +HP+ + A+ D R+WD+ G + GH P+ ++FSPNG
Sbjct: 623 IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
LATG D +WD+ + + H++ + ++F ++G L +GS D TV++W
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 739
Score = 287 (106.1 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 76/244 (31%), Positives = 115/244 (47%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSG 381
+A +G T A DVT S+ +A AD T R+W+ L R + A S
Sbjct: 469 NAYQGLT--AVDVTDD--SSLIAGGFADSTVRVWSVTPKKL--------RSVKQASDLS- 515
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ S D R+ D T EL + GHS VYG +F PD + S D R+W L+
Sbjct: 516 -LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
T ++ +GH PV FSP GY+ +GG D R+W + L + H ++
Sbjct: 575 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 634
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
++ P Y + TGS D TV++W + V+ +GH+ + SL P+ + +AT + D
Sbjct: 635 RYHPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 693
Query: 562 IKLW 565
+ LW
Sbjct: 694 VLLW 697
Score = 286 (105.7 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 80/278 (28%), Positives = 127/278 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ + D +L+A V++WS+ +K ++K +A+D++ + S
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVK----QASDLSL------IDKESD 522
Query: 349 DRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D R+ + S L GH + +F P YL ++S D T RLW + T L+
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 582
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH+ V+ F P G S G D +AR+W + + GH+ V + PN +
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNY 642
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ATG D T R+WD+ + + H I + F P G FL TG+ D V +W
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGH 701
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+V L GH V SL D + +A+ S D ++LW
Sbjct: 702 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 232 (86.7 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
+ LN +QG L + + D T R+W V T +L RSV +
Sbjct: 466 TFLNAYQG----LTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKL-------RSVKQAS- 512
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
D SL D L R+ D +T + L GH PV G SFSP+ +L + ED T R+
Sbjct: 513 --DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 570
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
W L+ L H+ + +F P GY+ V+G +D ++W+ ++ ++ +GH A
Sbjct: 571 WSLQTFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 629
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
V HP+ +AT S DR ++LW N
Sbjct: 630 DVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVEDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 238 (88.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ S D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 74 (31.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 345 (126.5 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 80/262 (30%), Positives = 127/262 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V IW++ + +L GHT + F+ V S + RLW+
Sbjct: 33 GRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH ++ + FHP G+YL + S D +LWDV + +GH+++V
Sbjct: 93 EAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+AF PDG AS D+ ++WDL G+ I H V + F PN Y LA+G D T
Sbjct: 153 LAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
++WDL K + + ++ V F P +G L +GS + T++V+ + +
Sbjct: 213 VKLWDLEKFNMIGSSEGETGVVRSVLFNP-DGSCLYSGS-ENTLRVYGWEPDRCFDVVHV 270
Query: 537 HEAKVTSLDIHPDEQSIATVSH 558
KV+ L I ++ + SH
Sbjct: 271 GWGKVSDLAISNNQMIAVSYSH 292
Score = 258 (95.9 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 54/186 (29%), Positives = 93/186 (50%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D +W V ++ GH+ +V I F+ + L R+WD
Sbjct: 32 SGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +LA+G D+ ++WD+R++ ++ H+ +
Sbjct: 92 LEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
+ F P +G +L + S D TVK+W K++ + H + V + HP+E +A+ S D
Sbjct: 152 CLAFSP-DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSAD 210
Query: 560 RWIKLW 565
R +KLW
Sbjct: 211 RTVKLW 216
Score = 201 (75.8 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 77/289 (26%), Positives = 125/289 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G +S + G LA+ S+ +K+W + R KGHT+ + FSP
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 341 NHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+A++S D T +LW+ G ++ F H + + FHP+ L + S D+T +LWD++
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLE 219
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ EG + V + F+PDGS S G + RV+ R + V +
Sbjct: 220 KFNMIGSSEGETGVVRSVLFNPDGSCLYS-GSENTLRVYGWEPDRCFDVVHVGWGKVSDL 278
Query: 460 SFSPNGYHLATGGEDNTC-RIWDL-RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTG--- 514
+ S N + N + DL R +KS VI LI Q K P L T
Sbjct: 279 AISNNQMIAVSYSHTNVSWYVVDLNRVKKSGSVI---QGLI-QDKPIPAPSSALGTTLRR 334
Query: 515 SYDMTVKVWSGRDFKLV-----KSLSGHEAKVTSLDIHPDEQSIATVSH 558
+Y+ +G++ K +S G +S D D++S A +++
Sbjct: 335 NYERPTTSCTGQEMKQSSEADRRSPEGERRSPSSEDEKEDKESSAEITN 383
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 47/135 (34%), Positives = 74/135 (54%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG S +G LATGGED IW + K + + H++
Sbjct: 11 WKLQ---EIVAHSSNVSSLVLGKS---SGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTS 64
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATV 556
+ ++F E +V GS ++++W K++++L GH+A ++SLD HP + +A+
Sbjct: 65 AVGCIQFNSSEER-VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASG 123
Query: 557 SHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 124 SVDSNIKLWDVRRKG 138
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 82/281 (29%), Positives = 134/281 (47%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+S D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIV-TSSGDTTCALWDIETGQQKTVFL 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
TG +D TCR++DLR + L ++ +H ++I + V F + G L+ G D +W
Sbjct: 242 CTGSDDATCRLFDLRADQEL-IVYSHESIICGITSVAFS-RSGRLLLAGYDDFNCNIWDS 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 300 LKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 273 (101.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 69/240 (28%), Positives = 111/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + K S L HT + F N + TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLD-DNSIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P K + + D T +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + ++ E + + ++FS +
Sbjct: 222 FSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C IWD K + + ++ H N +S + +G + TGS+D +K+W+
Sbjct: 282 GRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTA-DGMAVATGSWDSFLKIWN 340
Score = 213 (80.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 58/197 (29%), Positives = 91/197 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT + SP + +
Sbjct: 146 LSCCRFLDD-NSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D TA+LW+ +G+ TF GH + + F P+G+ + T S D T RL+D+ EL++
Sbjct: 205 DATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
H + GI AF G L + D +WD + L GH V + + +
Sbjct: 265 S-HESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTAD 323
Query: 465 GYHLATGGEDNTCRIWD 481
G +ATG D+ +IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--GRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + +++L+T G ++ L H + F + + T D TC +
Sbjct: 110 NFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDN-SIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D T K+W R+ ++ SGHE+
Sbjct: 169 WDIETGQQKTVFLGHTGDCMSLAVSPDFKLF-ISGACDATAKLWDVREGTCRQTFSGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDATCRLFDLR 256
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 56/245 (22%), Positives = 112/245 (45%)
Query: 306 LSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNT 364
+SGV + + +++ L+GH + + +S S + ++S D +W+T + ++
Sbjct: 34 VSGVEVVGRI-QMRTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHA 92
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFH 420
+ A+ PSG ++ D ++++ T G + +E H+ + F
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFL 152
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D S+ S G D +WD+ TG+ GH + ++ SP+ +G D T ++W
Sbjct: 153 DDNSIVTSSG-DTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLW 211
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR-DFKLVKSLSGHEA 539
D+R+ H + I+ + F P G + TGS D T +++ R D +L+ + HE+
Sbjct: 212 DVREGTCRQTFSGHESDINAICFFPN-GEAICTGSDDATCRLFDLRADQELI--VYSHES 268
Query: 540 KVTSL 544
+ +
Sbjct: 269 IICGI 273
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 33/140 (23%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
G++ + R+ +RT R+ L GH+ + + +S + L + +D +WD ++
Sbjct: 36 GVEVVGRI-QMRTRRT---LRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D +++ + + K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ SI T S D LW
Sbjct: 151 FL-DDNSIVTSSGDTTCALW 169
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 84/278 (30%), Positives = 132/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYS 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFAGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD L S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L V +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMVY-SHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDTLKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 281 (104.0 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 70/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWD+ G+
Sbjct: 162 GDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI+ FS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 213 (80.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 65/220 (29%), Positives = 102/220 (46%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E +G LS C + D N + TSS +W + Q+ + G
Sbjct: 124 YSLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFAG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT ++ +P + + + D +A+LW+ +G TF GH + + F P+G
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LR 441
T S D T RL+D+ EL++ H + GI AF G L + D VWD L+
Sbjct: 243 TGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLK 301
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
R+ + L GH V + + +G +ATG D+ +IW+
Sbjct: 302 ADRAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 190 (71.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + T D TC +
Sbjct: 110 NYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + H+ + + P F V+G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDIREGMCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+ ++ P+ + AT S D +L+ R D+ M
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLR--ADQELM 262
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 42/187 (22%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDI 213
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLL-NTFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGI 273
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
+AF SG+ L D +WD + GH V + DG A+ D
Sbjct: 274 TSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 81/276 (29%), Positives = 142/276 (51%)
Query: 295 SHDGN-LLATSSLSGVVKIW--SMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
S+DG+ L+ + SL +VK+W S RL+ S L+GH V SP N +A+SS D
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAH 87
Query: 352 ARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
RLW+ + G + G +D + +AF P ++L T S ++ V+TG + +
Sbjct: 88 IRLWDLESGKQIRAIDAGPVDAWS-VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT 146
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
+ + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+ L
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T +D +I++++ + H + + V F P + +F V+ S D +VKVW
Sbjct: 207 TASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHF-VSSSSDKSVKVWDVSART 265
Query: 530 LVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V + H+ +V + + + I +V+ D+ I ++
Sbjct: 266 CVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 280 (103.6 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 67/264 (25%), Positives = 122/264 (46%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + E L L T G + S GN++A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
A+ A V FSP S H+AT S ++ + G + + +A+ P
Sbjct: 99 IRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D ++++
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYE 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++FSP+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ + G +V+ + D + V+
Sbjct: 279 GVKYN-KNGSKIVSVADDQEIHVY 301
Score = 256 (95.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 56/180 (31%), Positives = 90/180 (50%)
Query: 391 KTWRLWDVDTGVELLLQ-EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
K W+ W D +EL EGH V + P G++ AS LDA R+WDL +G+ I A+
Sbjct: 45 KVWK-WS-DERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAI 102
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
+ ++FSP+ HLATG I+ + K Y + I + + P +G
Sbjct: 103 DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP-DGK 161
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+L +G+ D + ++ KL+ +L GH + SL PD Q + T S D +IK++ ++
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQH 221
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 47/190 (24%), Positives = 85/190 (44%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT S G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D ++++V GH
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHG 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ + H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
+D ++D
Sbjct: 293 ADDQEIHVYD 302
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 31/118 (26%), Positives = 62/118 (52%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + + L GH +V FSP
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/256 (27%), Positives = 123/256 (48%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F SGK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W+++TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 AARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ Y ++ + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 TGMCLMTLVGHDNWVR 342
Score = 235 (87.8 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 58/196 (29%), Positives = 95/196 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + + DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L ASC D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P + ATG E
Sbjct: 285 APESSYSSISEATGSE 300
Score = 228 (85.3 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 58/191 (30%), Positives = 89/191 (46%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG LG K W + E GH V + FHP S+ S DA +VWD
Sbjct: 81 SGGPLGQKRDPKEW----IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
TG L+GH V ISF +G LA+ D T ++WD + + + + H + +S
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
V P G +V+ + D T+K+W + VK+ +GH V + + D IA+ S+D
Sbjct: 197 SVAIMPN-GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 560 RWIKLWSTRNK 570
+ +++W K
Sbjct: 256 QTVRVWVVATK 266
Score = 187 (70.9 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV TG+ L+ GH V G+ FH G SC D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R + L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 175 (66.7 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ TG ++ L GH V G+ F G + + +D T R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 172 (65.6 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
Identities = 43/156 (27%), Positives = 76/156 (48%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ +++ D+T ++W G + TF GH + + + + G + + S D+T
Sbjct: 198 VAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA 427
R+W V T + L+E H V I++ P+ S ++
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESSYSS 292
Score = 164 (62.8 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V F G F+++ + D T++VW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + +K+L+ HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 309 VVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG 367
VV+ S +S++ T T + P + + S D+T ++W+ G L T G
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336
Query: 368 HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAA 427
H + + + FH GK++ + + DKT R+WD + H V + FH
Sbjct: 337 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396
Query: 428 SCGLDALARVWDLR 441
+ +D +VW+ R
Sbjct: 397 TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 8.0e-24, Sum P(2) = 8.0e-24
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + H + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRVWDYKNK 370
Score = 71 (30.1 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + +++ +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+ S D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L++ KGH + T V FS + H+A+ S D T +W+ S F GH D +
Sbjct: 9 PSLERH--FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG L + S DKT R+W + E + H+ +V + F DG + D
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW R + +L H+ V FSP+G + + +D T ++WD R+ ++ H
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEH 186
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ V F P G + D TVKVW R +L++ H A V +L HP +
Sbjct: 187 GGFVTYVDFHPS-GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 246 TASSDSTLKI 255
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 78/269 (28%), Positives = 123/269 (45%)
Query: 301 LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW--NTD 358
LA+ S+ + IW M + GH + T V FSP + +A+ S D+T R+W N
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
G F+ H + + F G+ L T S DKT ++W L H V
Sbjct: 94 GES-TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAK 152
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
F PDG L S D ++WD + I + H V + F P+G +A G DNT +
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVK 212
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE 538
+WD R + L HS ++ + F P G +L+T S D T+K+ + +L+ +L GH+
Sbjct: 213 VWDARTHRLLQHYQLHSAAVNALSFHPS-GNYLITASSDSTLKILDLMEGRLLYTLHGHQ 271
Query: 539 AKVTSLDIHPDEQSIATVSHDRWIKLWST 567
T++ + A+ D + +W +
Sbjct: 272 GPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 309 (113.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 76/242 (31%), Positives = 122/242 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F + T+S D+T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE-G 409
++W+T L + H++ + F P G+ + + S DKT +LWD T E +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECIHSYCE 185
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H V + FHP G+ A+ G+D +VWD RT R + + H V +SF P+G +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T D+T +I DL + + LY + H + V F + G + +G D V VW +F
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWKS-NFD 303
Query: 530 LV 531
+V
Sbjct: 304 IV 305
Score = 281 (104.0 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 62/211 (29%), Positives = 93/211 (44%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D SL F+GH D + + F + K+L + S D T +W + GH +V +
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P G L AS D R+W H V + F +G L T +D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W +++ L+ + H N + KF P +G +V+ S D TVK+W + + S H
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECIHSYCEH 186
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
VT +D HP IA D +K+W R
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDAR 217
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH +V + F + AS +D+ +W ++ GH V ++FSP+G+
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+G D T RIW + V AH+ + V F +G LVT S D TVKVWS
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF-CSDGQSLVTASDDKTVKVWSTHR 134
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
+ + SL+ H V PD + I + S D+ +KLW ++ H+
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS 182
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 242 (90.2 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 51/163 (31%), Positives = 86/163 (52%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH S+ + FHP +L S DA R+WD TG +L+GH V ++F G L
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 469 ATGGEDNTCRIWDLRKR-KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
A+ D + ++WD ++ + + + H + +S V F P G ++++ S D T+K+W
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPA-GDYVLSASRDRTIKMWEVAT 224
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
VK+ +GH V + +H + AT S+D+ I++W T +K
Sbjct: 225 GYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSK 267
Score = 237 (88.5 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 57/197 (28%), Positives = 91/197 (46%)
Query: 313 WSMPRL-QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLD 370
W +PR +KFS L GH T V F P+ + ++S D T R+W+ + G + +GH D
Sbjct: 94 W-IPRPPEKFS-LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTD 151
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAASC 429
+ +AF GK L + S D + +LWD E + GH +V +AF P G S
Sbjct: 152 SVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSA 211
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
D ++W++ TG + GH + V + G AT D T R+W +
Sbjct: 212 SRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKV 271
Query: 490 VIPAHSNLISQVKFEPQ 506
+ H + + + + P+
Sbjct: 272 ELRDHEHTVECIAWAPE 288
Score = 233 (87.1 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 56/191 (29%), Positives = 89/191 (46%)
Query: 367 GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLA 426
GH + R+ FHP + + S D T R+WD +TG +GH+ SV +AF G L
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 427 ASCGLDALARVWDLRTG-RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
ASC D ++WD + I + GH V ++F P G ++ + D T ++W++
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW--SGRDFKLVKSLSGHEAKVTS 543
+ H + V+ EG T S D T++VW + +D K+ L HE V
Sbjct: 226 YCVKTYTGHREWVRMVRVHI-EGSIFATCSNDQTIRVWLTNSKDCKV--ELRDHEHTVEC 282
Query: 544 LDIHPDEQSIA 554
+ P+ + A
Sbjct: 283 IAWAPEAAASA 293
Score = 226 (84.6 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 55/181 (30%), Positives = 89/181 (49%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG 359
L+ ++S ++IW + +LKGHT+ DV F +A+ SAD + +LW+
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 360 SL--LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
S + T GH ++ +AF P+G Y+ + S D+T ++W+V TG + GH V +
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA---TGGED 474
H +GS+ A+C D RVW + + L H V I+++P A G D
Sbjct: 242 RVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGAD 301
Query: 475 N 475
N
Sbjct: 302 N 302
Score = 209 (78.6 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 39/107 (36%), Positives = 58/107 (54%)
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
H G AS D R+WD+ G +L L GH V G++F P G +L + +D T R+
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
WDLR ++ + + AH + + + F Y +++GS D TVKVW R
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPY-VISGSVDQTVKVWECR 411
Score = 196 (74.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 41/106 (38%), Positives = 53/106 (50%)
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
H G +L + S DKT R+WDV G+ LL GH V G+AFHP G S D RV
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
WDLR R + L H I F ++ +G D T ++W+ R
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 173 (66.0 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G LA+G D T RIWD+ L + H N + + F P G +LV+ S D T++VW
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPG-GKYLVSASDDKTIRVWD 367
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
R+ + +K+L H+ TS+D H + + S D+ +K+W R
Sbjct: 368 LRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 165 (63.1 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQK-FSALKGHTERATDVTFSPVSNHVATSSADRT 351
++ G LLA+ S +K+W + + + GH + V F P ++V ++S DRT
Sbjct: 157 AFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRT 216
Query: 352 ARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW---DVDTGVELLLQ 407
++W G + T+ GH + + + H G T S D+T R+W D VEL
Sbjct: 217 IKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL--- 273
Query: 408 EGHSRSVYGIAFHPDGSLAA 427
H +V IA+ P+ + +A
Sbjct: 274 RDHEHTVECIAWAPEAAASA 293
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
+L GH + + F P + + ED T RIWD + + H++ + V F+ Q
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQ- 161
Query: 508 GYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
G L + S D+++K+W + ++ +K++ GH+ V+S+ P + + S DR IK+W
Sbjct: 162 GKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 343 VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ S D+T R+W+ G L T GH + + +AFHP GKYL + S DKT R+WD+
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
+ H I FH S +D +VW+ R
Sbjct: 372 RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 120 (47.3 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 507 EGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+G FL +GS D T+++W + +LSGH+ V L HP + + + S D+ I++W
Sbjct: 308 QGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
Query: 567 TRNK 570
RNK
Sbjct: 368 LRNK 371
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 26/103 (25%), Positives = 47/103 (45%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
H G LA+ S ++IW + L GH + F P ++ ++S D+T R+W
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 356 NTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
+ + T H + FH + Y+ + S D+T ++W+
Sbjct: 367 DLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 74 (31.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G D +S ++ G+ + ++S +K+W + GH E V
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEG 247
Query: 341 NHVATSSADRTARLWNTD 358
+ AT S D+T R+W T+
Sbjct: 248 SIFATCSNDQTIRVWLTN 265
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 81/276 (29%), Positives = 141/276 (51%)
Query: 295 SHDGN-LLATSSLSGVVKIW--SMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
S+DG+ L+ + SL +VK+W S RL+ AL+GH V SP N +A+SS D
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAH 87
Query: 352 ARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
RLW+ + G + + G +D + +AF P ++L T S ++ V+TG + +
Sbjct: 88 IRLWDLESGKQIRSIDAGPVDAWS-VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT 146
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
+ + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FS + L
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLV 206
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T +D +I+D++ + H + + V F P + +F V+ S D +VKVW
Sbjct: 207 TASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHF-VSSSSDKSVKVWDVSART 265
Query: 530 LVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V + H+ +V + + + I +V D+ I ++
Sbjct: 266 CVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 264 (98.0 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 64/264 (24%), Positives = 119/264 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + E L + G + S GN++A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A V FSP S H+AT S ++ + G + + +A+ P
Sbjct: 99 IRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F D L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++FSP+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ + G +V+ D + V+
Sbjct: 279 GVKYN-RNGSKIVSVGDDQEIHVY 301
Score = 243 (90.6 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 53/180 (29%), Positives = 89/180 (49%)
Query: 391 KTWRLWDVDTGVELLLQ-EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
K W+ W D +E+ EGH V + P G++ AS LDA R+WDL +G+ I ++
Sbjct: 45 KVWK-WS-DERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSI 102
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
+ ++FSP+ HLATG I+ + K Y + I + + P +G
Sbjct: 103 DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP-DGK 161
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+L +G+ D + ++ KL+ +L GH + SL D Q + T S D +IK++ ++
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQH 221
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/190 (25%), Positives = 85/190 (44%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT S G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F + L T S D +++DV GH
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHG 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ + H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
G+D ++D
Sbjct: 293 GDDQEIHVYD 302
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/118 (26%), Positives = 61/118 (51%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + + L GH +V FSP
Sbjct: 185 TLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + D+ ++D
Sbjct: 245 AHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 277 (102.6 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 68/256 (26%), Positives = 121/256 (47%)
Query: 311 KIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHL 369
K W +PR + AL GH T V F PV + + ++S D T ++W+ + G T +GH
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHT 150
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAAS 428
D + ++F +GK L + S D T +LWD G E + GH +V +A P+G S
Sbjct: 151 DSVQDISFDHTGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
D ++W++ TG + GH + V + + +G +A+ D T R+W + ++
Sbjct: 210 ASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECK 269
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL-DIH 547
+ H +++ + + P+ + + + K SG+ + LSG K + D+
Sbjct: 270 AELREHEHVVECISWAPESAHPTILEATGSETKK-SGKPGPFL--LSGSRDKTIKMWDVS 326
Query: 548 PDEQSIATVSHDRWIK 563
+ V HD W++
Sbjct: 327 IGMCLMTLVGHDNWVR 342
Score = 232 (86.7 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 59/196 (30%), Positives = 94/196 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG P++ + +++ ++S +K+W LKGHT+ D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKL 164
Query: 343 VATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ SAD T +LW+ G + T GH ++ +A P+G ++ + S DKT ++W+V TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATG 224
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ GH V + + DG+L AS D RVW + T L H V IS+
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 462 SPNGYHL----ATGGE 473
+P H ATG E
Sbjct: 285 APESAHPTILEATGSE 300
Score = 221 (82.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 52/162 (32%), Positives = 79/162 (48%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH V + FHP S+ S DA +VWD TG L+GH V ISF G L
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
A+ D T ++WD + + + + H + +S V P G +V+ S D T+K+W
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVATG 224
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
VK+ +GH V + + D IA+ S+D+ +++W K
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATK 266
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 36/118 (30%), Positives = 63/118 (53%)
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
AL GH PV + F P + + ED T ++WD + H++ + + F+
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD-HT 161
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
G L + S DMT+K+W + F+ ++++ GH+ V+S+ I P+ I + S D+ IK+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 179 (68.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 35/103 (33%), Positives = 50/103 (48%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G +L + S DKT ++WDV G+ L+ GH V G+ HP G SC D R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
+ R L H V + F ++ TG D T ++W+ R
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 173 (66.0 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
G S D ++WD+ G ++ L GH V G+ P G ++ + +D T RIWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++ + AH + ++ + F Y +VTGS D TVKVW R
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 171 (65.3 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 282 ESGD-DRPLSG-------CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
E+GD +R L G S+ H G LLA+ S +K+W + + GH +
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 334 VTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V P +H+ ++S D+T ++W G + TF GH + + + + G + ++S D+T
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQT 257
Query: 393 WRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGS 424
R+W V T + L+E H V I++ P+ +
Sbjct: 258 VRVWVVATKECKAELRE-HEHVVECISWAPESA 289
Score = 163 (62.4 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L +G D T ++WD+ L + H N + V P G ++V+ + D T+++W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPG-GKYIVSCADDKTLRIWD 366
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ + K+LS HE VTSLD H + T S D+ +K+W R
Sbjct: 367 YKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 345 TSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
+ S D+T ++W+ G L T GH + + + HP GKY+ + + DKT R+WD
Sbjct: 313 SGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRC 372
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
H V + FH + +D +VW+ R
Sbjct: 373 TKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 113 (44.8 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
S+ K + G FL++GS D T+K+W + +L GH+ V + +HP + I + +
Sbjct: 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCAD 358
Query: 559 DRWIKLWSTRNK 570
D+ +++W +NK
Sbjct: 359 DKTLRIWDYKNK 370
Score = 79 (32.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 267 DYALKKVESLYLDC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + +C T G D +S + +G+ + ++S +K+W +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTF 230
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLW 355
GH E V + +A+SS D+T R+W
Sbjct: 231 TGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/278 (28%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N VA D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + + GHS
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PDG S DA ++WD+R GH + ++F PNGY TG
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L + +H N+I + V F + G L+ G D +W
Sbjct: 245 SDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMKG 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 162 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 222 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ G
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLG 385
H+ ++ +P + + D + +LW+ S+ TF GH + +AF P+G
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D T RL+D+ ELL+ H + GI AF G L + D +WD
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
G L GH V + + +G +ATG D+ +IW+
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + + G D TC +
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + HS + + P +G V+G+ D ++K+W RD ++ GHE+
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ + T S D +L+ R
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLR 256
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S D T +W
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ +GH V SL + PD ++ + + D IKLW R+
Sbjct: 171 IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 422 DGSLAA-SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D +L + GLD + R+ +RT R+ L GH+ + + + + L + +D IW
Sbjct: 27 DSTLTQITAGLDPVGRI-QMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW 82
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSG 536
D ++ IP S+ + + P G F+ G D ++S + + ++ + L G
Sbjct: 83 DSYTTNKVHAIPLRSSWVMTCAYAPS-GNFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ D Q I T S D LW
Sbjct: 142 HTGYLSCCRFLDDNQ-IITSSGDTTCALW 169
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/278 (28%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N VA D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + + GHS
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PDG S DA ++WD+R GH + ++F PNGY TG
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L + +H N+I + V F + G L+ G D +W
Sbjct: 245 SDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMKG 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 162 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 222 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ G
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLG 385
H+ ++ +P + + D + +LW+ S+ TF GH + +AF P+G
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D T RL+D+ ELL+ H + GI AF G L + D +WD
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
G L GH V + + +G +ATG D+ +IW+
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + + G D TC +
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + HS + + P +G V+G+ D ++K+W RD ++ GHE+
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ + T S D +L+ R
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLR 256
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S D T +W
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ +GH V SL + PD ++ + + D IKLW R+
Sbjct: 171 IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 422 DGSLAA-SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D +L + GLD + R+ +RT R+ L GH+ + + + + L + +D IW
Sbjct: 27 DSTLTQITAGLDPVGRI-QMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW 82
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSG 536
D ++ IP S+ + + P G F+ G D ++S + + ++ + L G
Sbjct: 83 DSYTTNKVHAIPLRSSWVMTCAYAPS-GNFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ D Q I T S D LW
Sbjct: 142 HTGYLSCCRFLDDNQ-IITSSGDTTCALW 169
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/278 (28%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N VA D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + + GHS
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PDG S DA ++WD+R GH + ++F PNGY TG
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L + +H N+I + V F + G L+ G D +W
Sbjct: 245 SDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMKG 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 162 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 222 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ G
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLG 385
H+ ++ +P + + D + +LW+ S+ TF GH + +AF P+G
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D T RL+D+ ELL+ H + GI AF G L + D +WD
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
G L GH V + + +G +ATG D+ +IW+
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + + G D TC +
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + HS + + P +G V+G+ D ++K+W RD ++ GHE+
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ + T S D +L+ R
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLR 256
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S D T +W
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ +GH V SL + PD ++ + + D IKLW R+
Sbjct: 171 IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 422 DGSLAA-SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D +L + GLD + R+ +RT R+ L GH+ + + + + L + +D IW
Sbjct: 27 DSTLTQITAGLDPVGRI-QMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW 82
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSG 536
D ++ IP S+ + + P G F+ G D ++S + + ++ + L G
Sbjct: 83 DSYTTNKVHAIPLRSSWVMTCAYAPS-GNFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ D Q I T S D LW
Sbjct: 142 HTGYLSCCRFLDDNQ-IITSSGDTTCALW 169
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/278 (28%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N VA D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + + GHS
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PDG S DA ++WD+R GH + ++F PNGY TG
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L + +H N+I + V F + G L+ G D +W
Sbjct: 245 SDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMKG 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 162 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 222 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ G
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLG 385
H+ ++ +P + + D + +LW+ S+ TF GH + +AF P+G
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D T RL+D+ ELL+ H + GI AF G L + D +WD
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
G L GH V + + +G +ATG D+ +IW+
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + + G D TC +
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + HS + + P +G V+G+ D ++K+W RD ++ GHE+
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ + T S D +L+ R
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLR 256
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S D T +W
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ +GH V SL + PD ++ + + D IKLW R+
Sbjct: 171 IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 422 DGSLAA-SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D +L + GLD + R+ +RT R+ L GH+ + + + + L + +D IW
Sbjct: 27 DSTLTQITAGLDPVGRI-QMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW 82
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSG 536
D ++ IP S+ + + P G F+ G D ++S + + ++ + L G
Sbjct: 83 DSYTTNKVHAIPLRSSWVMTCAYAPS-GNFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ D Q I T S D LW
Sbjct: 142 HTGYLSCCRFLDDNQ-IITSSGDTTCALW 169
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/278 (28%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N VA D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + + GHS
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHS 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PDG S DA ++WD+R GH + ++F PNGY TG
Sbjct: 185 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L + +H N+I + V F + G L+ G D +W
Sbjct: 245 SDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMKG 302
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 162 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 222 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ G
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQQTVGFAG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLG 385
H+ ++ +P + + D + +LW+ S+ TF GH + +AF P+G
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D T RL+D+ ELL+ H + GI AF G L + D +WD
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
G L GH V + + +G +ATG D+ +IW+
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 194 (73.4 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + + G D TC +
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + HS + + P +G V+G+ D ++K+W RD ++ GHE+
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ + T S D +L+ R
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLR 256
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S D T +W
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSGDTTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ +GH V SL + PD ++ + + D IKLW R+
Sbjct: 171 IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 215
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 422 DGSLAA-SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D +L + GLD + R+ +RT R+ L GH+ + + + + L + +D IW
Sbjct: 27 DSTLTQITAGLDPVGRI-QMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW 82
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSG 536
D ++ IP S+ + + P G F+ G D ++S + + ++ + L G
Sbjct: 83 DSYTTNKVHAIPLRSSWVMTCAYAPS-GNFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ D Q I T S D LW
Sbjct: 142 HTGYLSCCRFLDDNQ-IITSSGDTTCALW 169
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/278 (28%), Positives = 131/278 (47%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N VA D +++
Sbjct: 22 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 81
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + + GHS
Sbjct: 82 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHS 140
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PDG S DA ++WD+R GH + ++F PNGY TG
Sbjct: 141 GDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTG 200
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L + +H N+I + V F + G L+ G D +W
Sbjct: 201 SDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMKG 258
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 259 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 59 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 117
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 118 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 177
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 178 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 236
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 237 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 295
Query: 524 S 524
+
Sbjct: 296 N 296
Score = 201 (75.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ G
Sbjct: 80 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIITSSGDTTCALWDIETGQQTVGFAG 138
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLG 385
H+ ++ +P + + D + +LW+ S+ TF GH + +AF P+G
Sbjct: 139 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 198
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D T RL+D+ ELL+ H + GI AF G L + D +WD
Sbjct: 199 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 257
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
G L GH V + + +G +ATG D+ +IW+
Sbjct: 258 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 194 (73.4 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 6 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 65
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L+T G R L GH + F + + + G D TC +
Sbjct: 66 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 124
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + HS + + P +G V+G+ D ++K+W RD ++ GHE+
Sbjct: 125 WDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 183
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ + T S D +L+ R
Sbjct: 184 DINAVAFFPNGYAFTTGSDDATCRLFDLR 212
Score = 188 (71.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D L S D +WD T + A+ V+ +++P+G +
Sbjct: 9 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 68
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S D T +W
Sbjct: 69 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSSGDTTCALWD 126
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ +GH V SL + PD ++ + + D IKLW R+
Sbjct: 127 IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 171
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 337 (123.7 bits), Expect = 8.7e-30, P = 8.7e-30
Identities = 69/205 (33%), Positives = 106/205 (51%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ QGHL + +AF PS ++ T S D+T ++WDV TGV L GH V
Sbjct: 162 WHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQV 221
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+A + S G D + WDL + I + GH+ V ++ P L TGG D
Sbjct: 222 RGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRD 281
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+ CR+WD+R + ++ + H N + V P + +VTGS+D T+K W R K + +L
Sbjct: 282 SVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQ-VVTGSHDTTIKFWDLRYGKTMSTL 340
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHD 559
+ H+ V ++ +HP E + A+ S D
Sbjct: 341 THHKKSVRAMTLHPKENAFASASAD 365
Score = 300 (110.7 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 67/232 (28%), Positives = 106/232 (45%)
Query: 295 SHDGNLLATSSLSGVVKIWSMPRL----QKFSALKGHTERATDVTFSPVSNHVATSSADR 350
S+ NL + + + W P + + ++GH V F P + T SADR
Sbjct: 139 SYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADR 198
Query: 351 TARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
T ++W+ G L T GH++++ +A Y+ + DK + WD++ + G
Sbjct: 199 TIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHG 258
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H VY +A HP + + G D++ RVWD+RT I AL GH V + P +
Sbjct: 259 HLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVV 318
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
TG D T + WDLR K++ + H + + P+E F + S D T K
Sbjct: 319 TGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAF-ASASADNTKK 369
Score = 226 (84.6 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 67/282 (23%), Positives = 123/282 (43%)
Query: 303 TSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSL 361
T S +KIW + L GH E+ + S ++ ++ D+ + W+ + +
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 252
Query: 362 LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHP 421
+ ++ GHL + +A HP+ L T D R+WD+ T +++ GH +V + P
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 422 DGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ D + WDLR G+++ L H K V ++ P A+ DNT + +
Sbjct: 313 TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK-FS 371
Query: 482 LRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGRDFKLVKSL--SG 536
L K + + + + I ++G +VTG + ++ W SG F+ +++ G
Sbjct: 372 LPKGEFCHNMLSQQKTIINAMAVNEDGV-MVTGGDNGSIWFWDWKSGHSFQQSETIVQPG 430
Query: 537 H---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
EA + + + T D+ IK+W K DE+A
Sbjct: 431 SLESEAGIYAACYDNTGSRLVTCEADKTIKMW----KEDENA 468
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/255 (21%), Positives = 101/255 (39%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + G + S+ + ++ VK W + + + + GH +
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269
Query: 338 PVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P + + T D R+W+ + + GH + + + P+ + T S D T + W
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D+ G + H +SV + HP + AS D + + L G + K +
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTI 388
Query: 457 LG-ISFSPNGYHLATGGEDNTCRIWDLRKRKSLY---VIPAHSNLISQVKFEP----QEG 508
+ ++ + +G + TGG++ + WD + S I +L S+ G
Sbjct: 389 INAMAVNEDGV-MVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTG 447
Query: 509 YFLVTGSYDMTVKVW 523
LVT D T+K+W
Sbjct: 448 SRLVTCEADKTIKMW 462
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 335 (123.0 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 83/286 (29%), Positives = 138/286 (48%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNH 342
G ++ +S + +AT+S + +WS+ P + + + GH + T + FSP N
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGNL 74
Query: 343 VATSSADRTARLWNTDGSLLNT-FQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A++S D+T RLW D ++ F+ H + + F G++L T S DK+ ++W +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQ 134
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L H+ V F PDG L SC D ++WD + + + V + F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDF 194
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
SPNG +A+ G D+ RIWD+R + L HS ++ + F P G LVT S D TVK
Sbjct: 195 SPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPS-GNSLVTASSDGTVK 253
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ + +L+ +L GH V ++ D + + D + +W T
Sbjct: 254 ILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT 299
Score = 285 (105.4 bits), Expect = 9.7e-23, P = 9.7e-23
Identities = 71/250 (28%), Positives = 110/250 (44%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L+++ KGH T FSP +AT+S D LW+ + + GH D +
Sbjct: 8 PILERY--FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F P G L + S DKT RLW +D + + H+ V + F DG + D
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + R + +L H V FSP+G + + ED T +IWD ++ +
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDS 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V F P G + + D V++W R +L++ H V L HP S+
Sbjct: 186 VGFANFVDFSPN-GTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLV 244
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 245 TASSDGTVKI 254
Score = 282 (104.3 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 64/219 (29%), Positives = 103/219 (47%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L F+GH + F P+ K + T S+D LW + GH V +
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Query: 418 AFHPDGSLAASCGLDALARVWDL-RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
F P G+L AS D R+W L R G+S + H PV + FS +G L T ED +
Sbjct: 67 QFSPQGNLLASASRDKTVRLWVLDRKGKSS-EFKAHTAPVRSVDFSADGQFLVTASEDKS 125
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
++W + +++ LY + H++ + KF P +G +V+ S D T+K+W + V + S
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTSKQCVNNFSD 184
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
+D P+ IA+ D +++W R N+ +H
Sbjct: 185 SVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQH 223
Score = 275 (101.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/211 (29%), Positives = 98/211 (46%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ +S DG L T+S +K+WSM R + +L HT FSP + + S
Sbjct: 104 PVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 348 ADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+T ++W+T +N F + + F P+G + + D R+WD+ L
Sbjct: 164 EDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQH 223
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ HS V ++FHP G+ + D ++ DL GR I L+GH PV +SFS +G
Sbjct: 224 YQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGE 283
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
+GG D +W + Y P+ NL
Sbjct: 284 LFTSGGADAQVLVWRTSFNQVHYRDPSKRNL 314
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 82/282 (29%), Positives = 132/282 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
++ +S + LA+ S+ +KIWSM P+++ + L GH + V FSP + VA+ S
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAY-CLVGHKDAVMCVQFSPSGHLVASGS 81
Query: 348 ADRTARLW--NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
D+T LW + G F+ H + + F G+ L T S DKT ++W V L
Sbjct: 82 RDKTVCLWVPSVKGES-TVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLF 140
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
H V F PDG L AS D ++WD + I + H + F P+G
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
+A G D T ++WD+R + L H+ ++ + F P G +L+T S D T+K+
Sbjct: 201 TCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPS-GNYLITASNDSTLKILDL 259
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ +L+ +L GH+ T + A+ D + +W T
Sbjct: 260 LEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT 301
Score = 306 (112.8 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 71/250 (28%), Positives = 116/250 (46%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLAR 374
P L++ +GH + T V FS +A+ S D ++W+ + GH D +
Sbjct: 10 PSLERH--FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC 67
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG + + S DKT LW E + + H+ +V + F DG + D
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + + + +L H+ V FSP+G +A+ +D T ++WD R+ ++ H
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEH 187
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ V+F P G + D TVKVW R +L++ H A V SL HP +
Sbjct: 188 GGFANHVEFHPS-GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLI 246
Query: 555 TVSHDRWIKL 564
T S+D +K+
Sbjct: 247 TASNDSTLKI 256
Score = 270 (100.1 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 59/218 (27%), Positives = 97/218 (44%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D SL F+GH D + + F + K L + S D ++W + + GH +V +
Sbjct: 9 DPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV 68
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P G L AS D +W + H V + FS +G L T +D T
Sbjct: 69 QFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTI 128
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W + ++K L+ + H N + +F P +G + + S D TVK+W + + S H
Sbjct: 129 KVWTVHRQKFLFSLSQHINWVRCARFSP-DGRLIASASDDKTVKLWDKTSRECIHSFCEH 187
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
++ HP IA D+ +K+W R N+ +H
Sbjct: 188 GGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQH 225
Score = 221 (82.9 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH ++ + F + AS +D+ ++W ++ L GH V+ + FSP+G+ +
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
A+G D T +W + V AH+ + V F +G LVT S D T+KVW+
Sbjct: 78 ASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFS-SDGQSLVTASDDKTIKVWTVHRQ 136
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
K + SLS H V PD + IA+ S D+ +KLW ++ H+
Sbjct: 137 KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHS 183
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 78/274 (28%), Positives = 134/274 (48%)
Query: 297 DGN-LLATSSLSGVVKIW--SMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
DG+ + T SL +VK+W S +L+ L+GH V S A+SS D R
Sbjct: 30 DGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIR 89
Query: 354 LWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
LW+ + G + + G +D +AF P KY+ T S ++ V++G + +
Sbjct: 90 LWDLETGKQIKSMDAGPVDAWT-VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRG 148
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
+ + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+ L T
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
+D +I+D++ + H + + V F P + +F V+ S D ++KVW V
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHF-VSSSSDKSIKVWDTSSRSCV 267
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ H+ +V S+ +P I + DR I ++
Sbjct: 268 NTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 273 (101.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 64/234 (27%), Positives = 114/234 (48%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S + T S D ++W L T +GH + + +G ++S D RLW
Sbjct: 32 SETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++TG ++ + + +AF PD A+ ++ + +G+ +L+ K +
Sbjct: 92 DLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
D +K++ + L +LSGH + V S+ PD+ + S D+ IK+W T ++
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSR 264
Score = 273 (101.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 65/264 (24%), Positives = 120/264 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + E L L T G + + S +G + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A V FSP S ++AT S ++ + G ++ + +A+ P
Sbjct: 99 IKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++FSP+ H + D + ++WD R + H + +
Sbjct: 219 VQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ P G +V+ D + ++
Sbjct: 279 SVKYNPT-GSKIVSAGDDRAIHIY 301
Score = 196 (74.1 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 48/190 (25%), Positives = 85/190 (44%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D +AT S G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHG 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD + + H V + ++P G + +
Sbjct: 233 SWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSA 292
Query: 472 GEDNTCRIWD 481
G+D I+D
Sbjct: 293 GDDRAIHIYD 302
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH V FSP
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+T S +NTF H D++ + ++P+G + + D+ ++D
Sbjct: 245 THFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 332 (121.9 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 85/297 (28%), Positives = 142/297 (47%)
Query: 273 VESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERA 331
+E L+ + G ++ +S + +AT+S + +WS+ P + + + GH +
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVV 63
Query: 332 TDVTFSPVSNHVATSSADRTARLWNTDGSLLNT-FQGHLDRLARMAFHPSGKYLGTTSFD 390
T + FSP N +A++S DRT RLW D ++ F+ H + + F G+ L T S D
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASED 123
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE 450
K+ ++W + L H+ V F PDG L SC D ++WD + +
Sbjct: 124 KSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 451 GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYF 510
V + F+PNG +A+ G D+ +IWD+R K L HS ++ + F P G
Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPL-GNS 242
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
LVT S D TVK+ + +L+ +L GH V ++ D + + + D + +W T
Sbjct: 243 LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRT 299
Score = 291 (107.5 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 66/219 (30%), Positives = 106/219 (48%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L +F+GH + F P+ K + T S+D LW + GH V +
Sbjct: 7 DPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Query: 418 AFHPDGSLAASCGLDALARVWDL-RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
F P G+L AS D R+W L R G+S + H PV + FS +G L T ED +
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSS-EFKAHTAPVRSVDFSADGQLLVTASEDKS 125
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
++W + +++ LY + H++ + KF P +G +V+ S D T+K+W + + V + S
Sbjct: 126 IKVWSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKGDEH 574
+D +P+ IA+ D +K+W R NK +H
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQH 223
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 76/258 (29%), Positives = 124/258 (48%)
Query: 312 IWSM-PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHL 369
+W+ P + + + GH + T V FSP N +A++S DRT RLW D + F+ H
Sbjct: 2 LWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASC 429
+ + F G++L T S DK+ ++W + L H+ V F PDG L SC
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 120
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
D ++WD + + V + F+P+G +A+ G D T ++WD+R K L
Sbjct: 121 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 180
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
HS ++ + F P G +L+T S D T+K+ + +L+ +L GH V ++
Sbjct: 181 HYQVHSGGVNCISFHPS-GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKG 239
Query: 550 EQSIATVSHDRWIKLWST 567
+ A+ D + LW T
Sbjct: 240 GELFASGGADTQVLLWRT 257
Score = 293 (108.2 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 80/266 (30%), Positives = 125/266 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
++ +S GNLLA++S V++W + KFS K HT V FS +AT+S
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 349 DRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D++ ++W+ L + H + F P G+ + + S DKT ++WD T + +
Sbjct: 81 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQCV-- 137
Query: 408 EGHSRSVYGIA----FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
S SV G A F+P G+ AS G D +VWD+R + + + H V ISF P
Sbjct: 138 NNFSDSV-GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP 196
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G +L T D T +I DL + + +Y + H+ + V F + G +G D V +W
Sbjct: 197 SGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS-KGGELFASGGADTQVLLW 255
Query: 524 SGRDFKL-VKSLSGHEAKVTSLDIHP 548
+L K L+ K D P
Sbjct: 256 RTNFDELHCKGLTKRNLKRLHFDSPP 281
Score = 291 (107.5 bits), Expect = 9.1e-24, P = 9.1e-24
Identities = 64/194 (32%), Positives = 96/194 (49%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ +S DG LAT+S +K+WSM R + +L HT FSP + + S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 348 ADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+T ++W+T +N F + + F+PSG + + D+T ++WDV L
Sbjct: 122 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 181
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ HS V I+FHP G+ + D ++ DL GR I L+GH PV +SFS G
Sbjct: 182 YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE 241
Query: 467 HLATGGEDNTCRIW 480
A+GG D +W
Sbjct: 242 LFASGGADTQVLLW 255
Score = 243 (90.6 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 395 LWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW--DLRTGRSILALEGH 452
LW+ GH V + F P G+L AS D R+W D R G+ + H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR-GK-FSEFKAH 59
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
PV + FS +G LAT ED + ++W + +++ LY + H++ + KF P +G +V
Sbjct: 60 TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIV 118
Query: 513 TGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NKG 571
+ S D T+K+W + + V + S +D +P IA+ D+ +K+W R NK
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 572 DEH 574
+H
Sbjct: 179 LQH 181
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 81/281 (28%), Positives = 131/281 (46%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD +L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
TG +D +CR++DLR + L +H ++I + V F G L G D VW
Sbjct: 242 CTGSDDASCRLFDLRADQELICF-SHESIICGITSVAFS-LSGRLLFAGYDDFNCNVWDS 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 300 MKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 66/240 (27%), Positives = 111/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + ++ E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C +WD K + + ++ H N +S + +G + TGS+D +K+W+
Sbjct: 282 GRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTA-DGMAVATGSWDSFLKIWN 340
Score = 209 (78.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 58/197 (29%), Positives = 92/197 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N++ TSS +W + Q+ + GHT + SP N + +
Sbjct: 146 LSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G+ TF GH + + F P+G+ + T S D + RL+D+ EL+
Sbjct: 205 DASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICF 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
H + GI AF G L + D VWD + L GH V + + +
Sbjct: 265 S-HESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTAD 323
Query: 465 GYHLATGGEDNTCRIWD 481
G +ATG D+ +IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 183 (69.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + +++L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFNLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D +++ R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 337 (123.7 bits), Expect = 7.4e-29, P = 7.4e-29
Identities = 83/255 (32%), Positives = 125/255 (49%)
Query: 262 IDDE-IDYALKKVESLYLDCTES--GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
+D E D ++ ++ + T S G P+ C+++ + NLL + S +++WS+
Sbjct: 423 LDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTW 482
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAF 377
+GH DV F+P + + S D+TARLW TD + L F GHL + + F
Sbjct: 483 SCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQF 542
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S D+T RLWD TG + L GH SV +AF G AS +D +
Sbjct: 543 HPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIII 602
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WDL G + L H V I+FS +G LA G DN +WD K Y+ ++
Sbjct: 603 WDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYI--SNHIT 660
Query: 498 ISQVKFEPQEGYFLV 512
+S + E E +L+
Sbjct: 661 VSHHQDENDEDVYLM 675
Score = 294 (108.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 73/231 (31%), Positives = 115/231 (49%)
Query: 323 ALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSG 381
+L GHT F+P N + + S D T RLW+ S + T++GH+ + + F P G
Sbjct: 445 SLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHG 504
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
Y + S+DKT RLW D+ L + GH V + FHP+ + A+ D R+WD
Sbjct: 505 YYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
TG+S+ + GH V ++FS G +LA+G D+ IWDL + + H++ ++ +
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTI 624
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS--LSGHEAKVTSLDIHPDE 550
F ++G L D + +W DF V +S H +T + H DE
Sbjct: 625 TFS-RDGTVLAAAGLDNNLTLW---DFHKVTEDYISNH---IT-VSHHQDE 667
Score = 288 (106.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/272 (28%), Positives = 121/272 (44%)
Query: 295 SHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARL 354
S D +LA V+IWS+ K LK A + + SAD R+
Sbjct: 386 SDDSTMLACGFGDSSVRIWSLTPA-KLRTLKD----ADSL------RELDKESADINVRM 434
Query: 355 WNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRS 413
+ G + + GH + R AF P L + S D T RLW + T ++ GH
Sbjct: 435 LDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYP 494
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
V+ + F P G SC D AR+W + +++ GH+ V + F PN ++ATG
Sbjct: 495 VWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSS 554
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
D T R+WD +S+ ++ H +S + F G +L +GS D + +W + LV +
Sbjct: 555 DRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSAC-GRYLASGSVDHNIIIWDLSNGSLVTT 613
Query: 534 LSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
L H + VT++ D +A D + LW
Sbjct: 614 LLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 282 (104.3 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 74/255 (29%), Positives = 118/255 (46%)
Query: 315 MPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLAR 374
+P ++ L H + T S S +A D + R+W+ + L T + D L
Sbjct: 365 LPSAVFYTVLNSH-QGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKD-ADSL-- 420
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ L S D R+ D +G GH+ VY AF P+ +L SC D+
Sbjct: 421 -------RELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDST 473
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
R+W L T ++ GHV PV + F+P+GY+ + D T R+W ++L V H
Sbjct: 474 IRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGH 533
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+ + V+F P Y + TGS D TV++W + V+ ++GH+ V+SL + +A
Sbjct: 534 LSDVDCVQFHPNSNY-VATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLA 592
Query: 555 TVSHDRWIKLWSTRN 569
+ S D I +W N
Sbjct: 593 SGSVDHNIIIWDLSN 607
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 78/283 (27%), Positives = 130/283 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
++ +S G +A+ S+ V +W+M + GH + T V FSP ++ +A+SS
Sbjct: 21 ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSR 80
Query: 349 DRTARLW--NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+T RLW + G + F+ H + + F G+ L T S D++ +LW V +
Sbjct: 81 DKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICT 139
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
H+ V F PDG L S D ++WD + + I G + F P+
Sbjct: 140 LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY--VDFHPS 197
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
+AT DNT R+WD+R L HS ++ + F P G L+T S D T+K+
Sbjct: 198 STCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPS-GNHLLTASSDSTLKILD 256
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ +L+ +L GH+ + + A+ D+ + +W T
Sbjct: 257 LLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRT 299
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 76/250 (30%), Positives = 113/250 (45%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L++ KGH + T + FSP +A+ S D + +WN S F GH D +
Sbjct: 8 PTLER--NFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTC 65
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PS L ++S DKT RLW E +L H+ SV + F DG + D
Sbjct: 66 VQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQS 125
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
++W + + I L H V FSP+G + + +D T ++WD R+ ++
Sbjct: 126 IKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEP 185
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
S V F P + T S D TV+VW R L++ H A V +L HP +
Sbjct: 186 GGYSSYVDFHPSSTC-IATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLL 244
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 245 TASSDSTLKI 254
Score = 283 (104.7 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 61/212 (28%), Positives = 101/212 (47%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D +L F+GH D + + F PSGK + + S D + +W++ GH +V +
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCV 66
Query: 418 AFHPDGSLAASCGLDALARVWDLRT-GRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
F P L AS D R+W G S+L H V + FS +G L T +D +
Sbjct: 67 QFSPSAHLLASSSRDKTVRLWVPSVKGESVL-FRAHTGSVRSVCFSADGQSLLTASDDQS 125
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
++W + ++K + + H+N + +F P +G +V+ S D TVK+W +L+ +
Sbjct: 126 IKLWSVHRQKIICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLWDASSRQLIHTFCE 184
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ +D HP IAT S D +++W R
Sbjct: 185 PGGYSSYVDFHPSSTCIATASSDNTVRVWDIR 216
Score = 223 (83.6 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH ++ + F P G AS +DA VW+++ GH V + FSP+ +
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHL 74
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+ D T R+W + + AH+ + V F +G L+T S D ++K+WS
Sbjct: 75 LASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSA-DGQSLLTASDDQSIKLWSVHR 133
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
K++ +L H V PD Q + +VS DR +KLW ++
Sbjct: 134 QKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR 176
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 53/176 (30%), Positives = 79/176 (44%)
Query: 264 DEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSA 323
D+ L V + CT + + +S DG L+ + S VK+W Q
Sbjct: 122 DDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHT 181
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
++ V F P S +AT+S+D T R+W+ +LL +Q H + ++FHPSG
Sbjct: 182 FCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGN 241
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
+L T S D T ++ D+ G L GH S ++F G AS G D VW
Sbjct: 242 HLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/281 (27%), Positives = 128/281 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
++ +S + LA+ S+ + +W M + GH + T V FSP + +A+ S
Sbjct: 22 VTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSR 81
Query: 349 DRTARLW--NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+T R+W N G F+ H + + F G+ T S DKT ++W L
Sbjct: 82 DKTVRIWVPNVKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFS 140
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
H V F PDG L S D ++WD + + + H V + F P+G
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+A G DNT ++WD+R + L HS ++ + F P G +LVT S D T+K+
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GNYLVTASSDSTLKILDLM 259
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ +L+ +L GH+ T++ + A+ D + +W +
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 313 (115.2 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 72/250 (28%), Positives = 114/250 (45%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLAR 374
P L++ KGH + T V FS + +A+ S D +W+ F GH D +
Sbjct: 9 PSLERH--FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG L + S DKT R+W + E + H+ +V + F DG + D
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + + +L H+ V FSP+G + + +D T ++WD R+ ++ H
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ V F P G + D TVKVW R +L++ H A V +L HP +
Sbjct: 187 GGFVTYVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 246 TASSDSTLKI 255
Score = 310 (114.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/242 (31%), Positives = 122/242 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F T+S D+T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE-G 409
++W+T L + H++ + F P G+ + + S DKT +LWD T E +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCE 185
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H V + FHP G+ A+ G+D +VWD+RT R + + H V +SF P+G +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T D+T +I DL + + LY + H + V F + G + +G D V VW +F
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWKS-NFD 303
Query: 530 LV 531
+V
Sbjct: 304 IV 305
Score = 275 (101.9 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 62/211 (29%), Positives = 90/211 (42%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D SL F+GH D + + F + K L + S D +W + GH +V +
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCV 67
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P G L AS D R+W H V + F +G T +D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W ++K L+ + H N + KF P +G +V+ S D TVK+W + V S H
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
VT +D HP IA D +K+W R
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Score = 223 (83.6 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 55/168 (32%), Positives = 80/168 (47%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH +V + F + AS +D+ VW ++ GH V ++FSP+G+
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+G D T RIW + V AH+ + V F +G VT S D TVKVWS
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF-CSDGQSFVTASDDKTVKVWSTHR 134
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
K + SLS H V PD + I + S D+ +KLW ++ H+
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 81/280 (28%), Positives = 128/280 (45%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNL--ISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
TG +D +CR++DLR + L S + I+ V F G L G D VW
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSQESIICGITSVAFS-LSGRLLFAGYDDFNCNVWDSL 300
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 301 KCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 265 (98.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 68/240 (28%), Positives = 112/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P K + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + + A E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C +WD K + + ++ H N +S + +G + TGS+D +K+W+
Sbjct: 282 GRLLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSCLGVTA-DGMAVATGSWDSFLKIWN 340
Score = 200 (75.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 56/196 (28%), Positives = 90/196 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N++ TSS +W + Q+ + GHT + SP + +
Sbjct: 146 LSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL- 406
D +A+LW+ +G+ TF GH + + F P+G+ + T S D + RL+D+ EL
Sbjct: 205 DASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAY 264
Query: 407 -QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
QE + +AF G L + D VWD + L GH V + + +G
Sbjct: 265 SQESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSCLGVTADG 324
Query: 466 YHLATGGEDNTCRIWD 481
+ATG D+ +IW+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + +++L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDYKLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 44/208 (21%), Positives = 93/208 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S + ++S D +W+T + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++++ + G + +E H+ + F D ++ S G D +W
Sbjct: 111 FVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ GH + ++ SP+ +G D + ++WD+R+ H + I
Sbjct: 170 DIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ + F P G + TGS D + +++ R
Sbjct: 230 NAICFFPN-GEAICTGSDDASCRLFDLR 256
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D +++ R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 74/250 (29%), Positives = 116/250 (46%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L++ KGH + T V FS + +A+ S D +W+ S F GH D +
Sbjct: 9 PSLERH--FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTC 66
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG L + S DKT R+W + E + H+ +V + F DG + D
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + + +L H+ V FSP+G + + +D T ++WD R+ ++ H
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ V F P G + S D TVKVW R +L++ H A V +L HP +
Sbjct: 187 GGFVTYVDFHPS-GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 246 TASSDSTLKI 255
Score = 316 (116.3 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 76/281 (27%), Positives = 128/281 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
++ +S + LA+ S+ + +W M + GH + T V FSP + +A+ S
Sbjct: 22 ITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSR 81
Query: 349 DRTARLW--NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+T R+W N G F+ H + + F G+ L T S DKT ++W L
Sbjct: 82 DKTVRIWIPNVKGES-TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFS 140
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
H V F PDG L S D ++WD + + + H V + F P+G
Sbjct: 141 LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+A DNT ++WD+R + L HS ++ + F P G +L+T S D T+K+
Sbjct: 201 CIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GNYLLTASSDSTLKILDLM 259
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ +L+ +L GH+ T++ + A+ D + +W +
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 304 (112.1 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 75/242 (30%), Positives = 122/242 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F + T+S D+T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE-G 409
++W+T L + H++ + F P G+ + + S DKT +LWD T E +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCE 185
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H V + FHP G+ A+ +D +VWD+RT R + + H V +SF P+G +L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T D+T +I DL + + LY + H + V F + G + +G D V VW +F
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWKS-NFD 303
Query: 530 LV 531
+V
Sbjct: 304 VV 305
Score = 279 (103.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 63/211 (29%), Positives = 92/211 (43%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D SL F+GH D + + F + K L + S D +W + GH +V +
Sbjct: 8 DPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCV 67
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P G L AS D R+W H V + F +G L T +D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W ++K L+ + H N + +F P +G +V+ S D TVK+W + V S H
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCARFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
VT +D HP IA S D +K+W R
Sbjct: 187 GGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Score = 225 (84.3 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 55/168 (32%), Positives = 81/168 (48%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH ++ + F + AS +D+ VW ++ GH V ++FSP+G+
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+G D T RIW + V AH+ + V F +G LVT S D TVKVWS
Sbjct: 76 LASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHF-CSDGQSLVTASDDKTVKVWSTHR 134
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
K + SLS H V PD + I + S D+ +KLW ++ H+
Sbjct: 135 QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 77/276 (27%), Positives = 126/276 (45%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+S + LA+ S+ + +W M + GH + T V FSP + +A+ S D+T R
Sbjct: 58 FSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 117
Query: 354 LW--NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+W N G F+ H + + F G+ T S DKT ++W L H
Sbjct: 118 IWVPNIKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHI 176
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V F PDG L S D ++WD + + + H V + F P+G +A
Sbjct: 177 NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAA 236
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
G DNT ++WD+R + L HS ++ + F P G +LVT S D T+K+ + +L+
Sbjct: 237 GMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GNYLVTASSDSTLKILDLMEGRLL 295
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+L GH+ T++ + A+ D + +W +
Sbjct: 296 YTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 331
Score = 309 (113.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 75/242 (30%), Positives = 122/242 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F T+S D+T
Sbjct: 99 NFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE-G 409
++W+T L + H++ + F P G+ + + S DKT +LWD T E +
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCE 216
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H V + FHP G+ A+ G+D +VWD+RT R + + H V +SF P+G +L
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T D+T +I DL + + LY + H + V F + G + +G D V VW +F
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWKS-NFD 334
Query: 530 LV 531
++
Sbjct: 335 VI 336
Score = 307 (113.1 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 73/250 (29%), Positives = 114/250 (45%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L++ KGH + T V FS +A+ S D +W+ S F GH D +
Sbjct: 40 PSLERH--FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 97
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG L + S DKT R+W + E + H+ +V + F DG + D
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + + +L H+ V FSP+G + + +D T ++WD R+ ++ H
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 217
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ V F P G + D TVKVW R +L++ H A V +L HP +
Sbjct: 218 GGFVTYVDFHPS-GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 277 TASSDSTLKI 286
Score = 269 (99.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 63/218 (28%), Positives = 92/218 (42%)
Query: 351 TARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
T L D SL F+GH D + + F + K L + S D +W + GH
Sbjct: 32 TMALPQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGH 91
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+V + F P G L AS D R+W H V + F +G T
Sbjct: 92 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVT 151
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
+D T ++W ++K L+ + H N + KF P +G +V+ S D TVK+W +
Sbjct: 152 ASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSREC 210
Query: 531 VKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
V S H VT +D HP +A D +K+W R
Sbjct: 211 VHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 248
Score = 216 (81.1 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 54/168 (32%), Positives = 80/168 (47%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH +V + F + AS +D+ VW ++ GH V ++FSP+G+
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 106
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+G D T RIW + V AH+ + V F +G VT S D T+KVWS
Sbjct: 107 LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHF-CSDGQSFVTASDDKTIKVWSTHR 165
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
K + SLS H V PD + I + S D+ +KLW ++ H+
Sbjct: 166 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 213
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 80/281 (28%), Positives = 131/281 (46%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+++ +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
TG +D +CR++DLR + L +H ++I + V F G L G D VW
Sbjct: 242 CTGSDDASCRLFDLRADQELTTY-SHESIICGITSVAFS-LSGRLLFAGYDDFNCNVWDS 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V +LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 300 MKCERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 262 (97.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 68/240 (28%), Positives = 110/240 (45%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P K + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + + E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C +WD K + + + H N +S + +G + TGS+D +K+W+
Sbjct: 282 GRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCLGVTA-DGMAVATGSWDSFLKIWN 340
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/219 (28%), Positives = 97/219 (44%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E S LS C + D N++ TSS +W + Q+ + G
Sbjct: 124 YSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT + SP + + D +A+LW+ +G+ TF GH + + F P+G+ +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAIC 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D + RL+D+ EL H + GI AF G L + D VWD
Sbjct: 243 TGSDDASCRLFDLRADQELTTYS-HESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ L GH V + + +G +ATG D+ +IW+
Sbjct: 302 CERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/209 (24%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/226 (20%), Positives = 101/226 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S + ++S D +W+T + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++ + + G + +E H+ + F D ++ S G D +W
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ GH + ++ SP+ +G D + ++WD+R+ H + I
Sbjct: 170 DIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ + F P G + TGS D + +++ R + + + S HE+ + +
Sbjct: 230 NAICFFPN-GEAICTGSDDASCRLFDLRADQELTTYS-HESIICGI 273
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D ++S R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 81/281 (28%), Positives = 130/281 (46%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+++ +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
TG +D +CR++DLR + L AH ++I + V F G L G D VW
Sbjct: 242 CTGSDDASCRLFDLRADQELTTY-AHESIICGITSVAFS-LSGRLLFAGYDDFNCNVWDS 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 300 MKCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 264 (98.0 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 68/240 (28%), Positives = 112/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P + + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSIL--ALEGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + + A E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C +WD K + + ++ H N +S + +G + TGS+D +K+W+
Sbjct: 282 GRLLFAGYDDFNCNVWDSMKCERVGILSGHDNRVSCLGVTA-DGMAVATGSWDSFLKIWN 340
Score = 200 (75.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 63/219 (28%), Positives = 97/219 (44%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E S LS C + D N++ TSS +W + Q+ + G
Sbjct: 124 YSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT + SP + + D +A+LW+ +G+ TF GH + + F P+G+ +
Sbjct: 183 HTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAIC 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D + RL+D+ EL H + GI AF G L + D VWD
Sbjct: 243 TGSDDASCRLFDLRADQELTTY-AHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ L GH V + + +G +ATG D+ +IW+
Sbjct: 302 CERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/209 (24%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFRLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/227 (21%), Positives = 101/227 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S + ++S D +W+T + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++ + + G + +E H+ + F D ++ S G D +W
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ GH + ++ SP+ +G D + ++WD+R+ H + I
Sbjct: 170 DIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGR-DFKLVKSLSGHEAKVTSL 544
+ + F P G + TGS D + +++ R D +L + HE+ + +
Sbjct: 230 NAICFFPN-GEAICTGSDDASCRLFDLRADQEL--TTYAHESIICGI 273
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D ++S R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 315 (115.9 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 76/276 (27%), Positives = 126/276 (45%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+S + LA+ S+ + +W M + GH + T V FSP + +A+ S D+T R
Sbjct: 27 FSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 354 LW--NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+W N G F+ H + + F G+ T S DKT ++W L H
Sbjct: 87 IWVPNVKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHI 145
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V F PDG L S D ++WD + + + H V + F P+G +A
Sbjct: 146 NWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAA 205
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
G DNT ++WD+R + L HS ++ + F P G +L+T S D T+K+ + +L+
Sbjct: 206 GMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPS-GNYLITASSDSTLKILDLMEGRLL 264
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+L GH+ T++ + A+ D + +W +
Sbjct: 265 YTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 311 (114.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 75/241 (31%), Positives = 121/241 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F T+S D+T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
++W T L + H++ + F P G+ + + S DKT +LWD + + H
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
V + FHP G+ A+ G+D +VWD+RT R + + H V G+SF P+G +L T
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
D+T +I DL + + LY + H + V F + G + +G D V VW +F +
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWKS-NFDI 304
Query: 531 V 531
V
Sbjct: 305 V 305
Score = 309 (113.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 73/250 (29%), Positives = 114/250 (45%)
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLAR 374
P L++ KGH + T V FS + +A+ S D +W+ S F GH D +
Sbjct: 9 PSLERH--FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ F PSG L + S DKT R+W + E + H+ +V + F DG + D
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+VW + + +L H+ V FSP+G + + +D T ++WD R+ ++ H
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
++ V F P G + D TVKVW R +L++ H A V L HP +
Sbjct: 187 GGFVTYVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 245
Query: 555 TVSHDRWIKL 564
T S D +K+
Sbjct: 246 TASSDSTLKI 255
Score = 269 (99.8 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 62/211 (29%), Positives = 90/211 (42%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D SL F+GH D + + F + K L + S D +W + GH +V +
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 67
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F P G L AS D R+W H V + F +G T +D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++W ++K L+ + H N + KF P +G +V+ S D TVK+W + V S H
Sbjct: 128 KVWATHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
VT +D HP IA D +K+W R
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Score = 217 (81.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 54/168 (32%), Positives = 80/168 (47%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH +V + F + AS +D+ VW ++ GH V ++FSP+G+
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA+G D T RIW + V AH+ + V F +G VT S D TVKVW+
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF-CSDGQSFVTASDDKTVKVWATHR 134
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
K + SLS H V PD + I + S D+ +KLW ++ H+
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS 182
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 314 (115.6 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 80/281 (28%), Positives = 130/281 (46%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+++ +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
TG +D +CR++DLR + L +H ++I + V F G L G D VW
Sbjct: 242 CTGSDDASCRLFDLRADQELTAY-SHESIICGITSVAFS-LSGRLLFAGYDDFNCNVWDS 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 300 LKCERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 70/240 (29%), Positives = 112/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P K + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + + A E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C +WD K + + V+ H N +S + +G + TGS+D +K+W+
Sbjct: 282 GRLLFAGYDDFNCNVWDSLKCERVGVLSGHDNRVSCLGVTA-DGMAVATGSWDSFLKIWN 340
Score = 200 (75.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 63/219 (28%), Positives = 97/219 (44%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E S LS C + D N++ TSS +W + Q+ + G
Sbjct: 124 YSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT + SP + + D +A+LW+ +G+ TF GH + + F P+G+ +
Sbjct: 183 HTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAIC 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWDLRT 442
T S D + RL+D+ EL H + GI AF G L + D VWD
Sbjct: 243 TGSDDASCRLFDLRADQELTAYS-HESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLK 301
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ L GH V + + +G +ATG D+ +IW+
Sbjct: 302 CERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 183 (69.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/209 (24%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDYKLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/226 (20%), Positives = 101/226 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S + ++S D +W+T + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++ + + G + +E H+ + F D ++ S G D +W
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ GH + ++ SP+ +G D + ++WD+R+ H + I
Sbjct: 170 DIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ + F P G + TGS D + +++ R + + + S HE+ + +
Sbjct: 230 NAICFFPN-GEAICTGSDDASCRLFDLRADQELTAYS-HESIICGI 273
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D ++S R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 314 (115.6 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 81/239 (33%), Positives = 121/239 (50%)
Query: 345 TSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
T S D T +LW D L+ T GH +A +A HPSG ++S D R++DVDT
Sbjct: 35 TGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNAT 94
Query: 404 LLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLRTGRSILALE----GHVKP--- 455
+ + E V+G+ F P G+ LA + G A ++WD + R I L KP
Sbjct: 95 IAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDK 154
Query: 456 ------VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
VL +++SPNG LA G D T ++D+ + K L+ + H+ + + F P +
Sbjct: 155 TSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPR 214
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
L +GS D V + L+ S+SGH + V S+D PD +IAT S DR ++LW +
Sbjct: 215 VLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Score = 211 (79.3 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 70/266 (26%), Positives = 125/266 (46%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+D+ + L + + L L T +G ++ + G + A+SS+ V+++ +
Sbjct: 37 SLDETVK--LWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNAT 94
Query: 321 FSALKGHTERATDVTFSPVSNHVATSS-ADRTARLWNTDG-SLLNTFQ-------GHLDR 371
+ L+ + F P +A + + + +LW+T L++T D+
Sbjct: 95 IAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDK 154
Query: 372 LAR------MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ-EGHSRSVYGIAFHP-DG 423
+ +A+ P+GK L S D T ++DVD +LL Q EGH+ V + F P D
Sbjct: 155 TSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRS-KLLHQLEGHNMPVRSLVFSPVDP 213
Query: 424 SLAASCGLDALARVWDLRTGRSIL-ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
+ S D + D G+++L ++ GH VL + SP+G +ATG D T R+WDL
Sbjct: 214 RVLFSGSDDGHVNMHDAE-GKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEG 508
+ R ++ + H++ + V F P G
Sbjct: 273 KMRAAIQTMSNHNDQVWSVAFRPPGG 298
Score = 202 (76.2 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 73/289 (25%), Positives = 127/289 (43%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD- 358
LL T SL VK+W L GH+ + P A+SS D R+++ D
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT 91
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYL----GTTSFDKTWRL--WDVDTGVELLLQEGHSR 412
+ + + + M F P G L G+++ K W W + + + + +
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKP 151
Query: 413 S--------VYGIAFHPDGSLAASCG-LDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
S V +A+ P+G A CG +D V+D+ + + LEGH PV + FSP
Sbjct: 152 SDKTSSKKFVLSVAWSPNGKRLA-CGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSP 210
Query: 464 -NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
+ L +G +D + D + L + H++ + V P +G + TGS D TV++
Sbjct: 211 VDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRTVRL 269
Query: 523 WSGRDFKLVKSLSGHEAKVTSLDIHPDEQS------IATVSHDRWIKLW 565
W + ++++S H +V S+ P + +A+VS D+ + L+
Sbjct: 270 WDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLY 318
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 44/149 (29%), Positives = 69/149 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATS-SADRT 351
++S +G LA S+ G + ++ + R + L+GH + FSPV V S S D
Sbjct: 165 AWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGH 224
Query: 352 ARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
+ + +G +LL + GH + + P G + T S D+T RLWD+ + H
Sbjct: 225 VNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWD 439
+ V+ +AF P G G LA V D
Sbjct: 285 NDQVWSVAFRPPGGTGVRAG--RLASVSD 311
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 313 (115.2 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 78/281 (27%), Positives = 129/281 (45%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D L ++S G + +W K A+ + +SP +N VA D
Sbjct: 70 WAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANFVACGGLDNICS 129
Query: 354 LWNTDGS-----LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N + H L+ F + + + T+S D T LWDV+ G ++
Sbjct: 130 IYNLRSREQPIRVCRELNSHTGYLSCCRFL-NDRQIVTSSGDMTCILWDVENGTKITEFS 188
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
H+ V ++ PD + S DA A++WDLR+G+ + GH + + + PNG
Sbjct: 189 DHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSF 248
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNL---ISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
TG +D +CR++D+R + L H N+ I+ V F G FL G D T VW
Sbjct: 249 GTGSDDASCRLFDIRADRELMQY-THDNILCGITSVGFS-FSGRFLFAGYDDFTCNVWDT 306
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V SL+GH +V+ L + D ++ T S D +K+W+
Sbjct: 307 LKGERVLSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIWA 347
Score = 258 (95.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 67/241 (27%), Positives = 113/241 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSA---LKGHTERATDVTFSPVSNHVATSS 347
C+YS N +A L + I+++ R Q L HT + F + TSS
Sbjct: 110 CAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLN-DRQIVTSS 168
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G+ + F H + ++ P Y + + D T +LWD+ +G +
Sbjct: 169 GDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQT 228
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + + + P+G + DA R++D+R R ++ H + GI+ FS
Sbjct: 229 FTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYT-HDNILCGITSVGFSF 287
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D TC +WD K + + + H N +S + P +G L TGS+D +K+W
Sbjct: 288 SGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLGV-PTDGMALCTGSWDSLLKIW 346
Query: 524 S 524
+
Sbjct: 347 A 347
Score = 215 (80.7 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 63/218 (28%), Positives = 94/218 (43%)
Query: 268 YALKKVESLYLDCTESGDDRP-LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y L+ E C E LS C + +D ++ TSS +W + K +
Sbjct: 131 YNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIV-TSSGDMTCILWDVENGTKITEFSD 189
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
H V+ SP N+ + + D TA+LW+ G + TF GH + + + P+G G
Sbjct: 190 HNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFG 249
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA---FHPDGSLAASCGLDALARVWDLRT 442
T S D + RL+D+ EL+ Q H + GI F G + D VWD
Sbjct: 250 TGSDDASCRLFDIRADRELM-QYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLK 308
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
G +L+L GH V + +G L TG D+ +IW
Sbjct: 309 GERVLSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 196 (74.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 55/207 (26%), Positives = 92/207 (44%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GHL ++ M + +L + S D +WD T ++ S V A+ P +
Sbjct: 59 KGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANF 118
Query: 426 AASCGLDALARVWDLRTG----RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
A GLD + +++LR+ R L H + F N + T D TC +WD
Sbjct: 119 VACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFL-NDRQIVTSSGDMTCILWD 177
Query: 482 LRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKV 541
+ + H+ + V P + YF ++G+ D T K+W R K V++ +GHEA +
Sbjct: 178 VENGTKITEFSDHNGDVMSVSVSPDKNYF-ISGACDATAKLWDLRSGKCVQTFTGHEADI 236
Query: 542 TSLDIHPDEQSIATVSHDRWIKLWSTR 568
++ P+ S T S D +L+ R
Sbjct: 237 NAVQYFPNGLSFGTGSDDASCRLFDIR 263
Score = 171 (65.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 46/166 (27%), Positives = 75/166 (45%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH +Y + + D S D VWD T + A+ V+ ++SP
Sbjct: 59 KGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANF 118
Query: 468 LATGGEDNTCRIWDLRKRKS-LYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+A GG DN C I++LR R+ + V + +H+ +S +F +VT S DMT +W
Sbjct: 119 VACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQ--IVTSSGDMTCILW 176
Query: 524 SGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + S H V S+ + PD+ + + D KLW R+
Sbjct: 177 DVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRS 222
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/238 (23%), Positives = 107/238 (44%)
Query: 303 TSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLL 362
T L G+ K+ ++++ LKGH + + ++ + H+ ++S D +W DG
Sbjct: 39 TRDLPGLPKMEGKIKVRR--NLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVW--DGLTT 94
Query: 363 NTFQGHLDR---LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL--LQEGHSRSVY-- 415
N R + A+ P+ ++ D ++++ + + + +E +S + Y
Sbjct: 95 NKVHAIPLRSSWVMTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLS 154
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
F D + S G D +WD+ G I H V+ +S SP+ + +G D
Sbjct: 155 CCRFLNDRQIVTSSG-DMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDA 213
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR-DFKLVK 532
T ++WDLR K + H I+ V++ P G TGS D + +++ R D +L++
Sbjct: 214 TAKLWDLRSGKCVQTFTGHEADINAVQYFPN-GLSFGTGSDDASCRLFDIRADRELMQ 270
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 312 (114.9 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 75/239 (31%), Positives = 117/239 (48%)
Query: 336 FSPVSNHVATSSADRTARLWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFD 390
++P N+VA D ++N +G++ GH L+ F + + T+S D
Sbjct: 5 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGD 63
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE 450
T LWD++TG + GH+ V ++ PD L S DA A++WD+R G
Sbjct: 64 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 123
Query: 451 GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQE 507
GH + I F PNG ATG +D TCR++DLR + L +H N+I + V F +
Sbjct: 124 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KS 181
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
G L+ G D VW L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 182 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 3 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 61
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 62 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 121
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI---SFSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI SFS
Sbjct: 122 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSK 180
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 181 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 239
Query: 524 S 524
+
Sbjct: 240 N 240
Score = 162 (62.1 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 418 AFHPDGSLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGE 473
A+ P G+ A GLD + +++L+T G R L GH + F + + T
Sbjct: 4 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSG 62
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
D TC +WD+ + H+ + + P F V+G+ D + K+W R+ ++
Sbjct: 63 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDVREGMCRQT 121
Query: 534 LSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+GHE+ + ++ P+ + AT S D +L+ R D+ M
Sbjct: 122 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLR--ADQELM 162
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 41/187 (21%), Positives = 70/187 (37%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
DN + + AL +E+ T +G + S + D L + + K+W +
Sbjct: 54 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 113
Query: 316 PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN--TDGSLLN-TFQGHLDRL 372
GH + F P N AT S D T RL++ D L+ + + +
Sbjct: 114 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 173
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
++F SG+ L D +WD + GH V + DG A+ D
Sbjct: 174 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 233
Query: 433 ALARVWD 439
+ ++W+
Sbjct: 234 SFLKIWN 240
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 329 (120.9 bits), Expect = 8.5e-28, P = 8.5e-28
Identities = 76/226 (33%), Positives = 113/226 (50%)
Query: 259 DESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRL 318
+E DDE D + ++++L G P+ ++ D + L + S V+ W +
Sbjct: 334 EEEADDE-DASGSEIKTL------RGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSF 386
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAF 377
+GH DV SP S + +T+S DRTARLW+ + L + GHL + + F
Sbjct: 387 TNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKF 446
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
HP+ Y+ T S DKT RLW G + L GH V +AF P+G AS G D ++
Sbjct: 447 HPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKL 506
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
WDL +G L GH + +SFS + +A+ DNT R+WD+R
Sbjct: 507 WDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIR 552
Score = 311 (114.5 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 81/281 (28%), Positives = 126/281 (44%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ S D LLA + VK+WS+ R +K LK +A DV+ ++ V A
Sbjct: 283 LNTAEVSADSRLLAAGFDNSAVKLWSL-RARK---LKAGPHKA-DVSKIRLACDVLEEEA 337
Query: 349 DRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
D + GS + T +GH + R AF L + S D T R WD+ + +L
Sbjct: 338 DDE----DASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYR 393
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ V+ + P ++ D AR+W + GH+ V + F PN ++
Sbjct: 394 GHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYI 453
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
ATG D T R+W R+ S+ + H + + F P G +L + D +K+W
Sbjct: 454 ATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPN-GKYLASAGEDQRLKLWDLASG 512
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
L K L GH ++SL D +A+ S D +++W RN
Sbjct: 513 GLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 275 (101.9 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 59/176 (33%), Positives = 87/176 (49%)
Query: 397 DVD-TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKP 455
D D +G E+ GHS VY AF D S SC D+ R WDL++ + + GH P
Sbjct: 339 DEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYP 398
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + SP + +T D T R+W + L + H + + VKF P Y + TGS
Sbjct: 399 VWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNY-IATGS 457
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
D TV++WS R V+ +GH V +L P+ + +A+ D+ +KLW + G
Sbjct: 458 TDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGG 513
Score = 263 (97.6 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 53/158 (33%), Positives = 81/158 (51%)
Query: 302 ATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGS 360
+T+S ++WS R GH V F P SN++AT S D+T RLW+T G+
Sbjct: 412 STASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGA 471
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
+ F GH + +AF P+GKYL + D+ +LWD+ +G GH+ ++ ++F
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFS 531
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
D SL AS +D RVWD+R +G ++G
Sbjct: 532 QDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIG 569
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 311 (114.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 79/280 (28%), Positives = 128/280 (45%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+++ +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNL--ISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
TG +D +CR++DLR + L S + I+ V F G L G D +W
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFS-LSGRLLFAGYDDFNCNIWDSM 300
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 301 KGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 272 (100.8 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 71/240 (29%), Positives = 112/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P K + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + + A E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C IWD K + + ++ H N +S + +G + TGS+D +KVW+
Sbjct: 282 GRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTA-DGMAVATGSWDSFLKVWN 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 60/218 (27%), Positives = 97/218 (44%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E S LS C + D N++ TSS +W + Q+ + G
Sbjct: 124 YSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT + SP + + D +A+LW+ +G+ TF GH + + F P+G+ +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAIC 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSR--SVYGIAFHPDGSLAASCGLDALARVWDLRTG 443
T S D + RL+D+ EL S + +AF G L + D +WD G
Sbjct: 243 TGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKG 302
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ L GH V + + +G +ATG D+ ++W+
Sbjct: 303 ERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/209 (24%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 44/208 (21%), Positives = 92/208 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S + ++S D +W+T + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++ + + G + +E H+ + F D ++ S G D +W
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ GH + ++ SP+ +G D + ++WD+R+ H + I
Sbjct: 170 DIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ + F P G + TGS D + +++ R
Sbjct: 230 NAICFFPN-GEAICTGSDDASCRLFDLR 256
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D ++S R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 311 (114.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 79/280 (28%), Positives = 128/280 (45%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D LL ++S G + +W K A+ + ++P N VA D
Sbjct: 63 WATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+++ +G++ H L+ F + T+S D T LWD++TG + +
Sbjct: 123 IYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFV 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ +A PD L S DA A++WD+R G GH + I F PNG +
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAI 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNL--ISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
TG +D +CR++DLR + L S + I+ V F G L G D +W
Sbjct: 242 CTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFS-LSGRLLFAGYDDFNCNIWDSM 300
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ V LSGH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 301 KGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 272 (100.8 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 71/240 (29%), Positives = 112/240 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + K S L HT + F N++ TSS
Sbjct: 103 CAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD-DNNIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH +A P K + + D + +LWDV G
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPN 464
GH + I F P+G + DA R++DLR + + A E + + ++FS +
Sbjct: 222 FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLS 281
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
G L G +D C IWD K + + ++ H N +S + +G + TGS+D +KVW+
Sbjct: 282 GRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTA-DGMAVATGSWDSFLKVWN 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 60/218 (27%), Positives = 97/218 (44%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E S LS C + D N++ TSS +W + Q+ + G
Sbjct: 124 YSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTVFVG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT + SP + + D +A+LW+ +G+ TF GH + + F P+G+ +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAIC 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSR--SVYGIAFHPDGSLAASCGLDALARVWDLRTG 443
T S D + RL+D+ EL S + +AF G L + D +WD G
Sbjct: 243 TGSDDASCRLFDLRADQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKG 302
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ L GH V + + +G +ATG D+ ++W+
Sbjct: 303 ERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/209 (24%), Positives = 94/209 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + K L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDL--RTGRSILA--LEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + ++ L R G ++ L H + F + ++ T D TC +
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN-NIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + V H+ + P F ++G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLF-ISGACDASAKLWDVREGTCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ ++I T S D +L+ R
Sbjct: 228 DINAICFFPNGEAICTGSDDASCRLFDLR 256
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 44/208 (21%), Positives = 92/208 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S + ++S D +W+T + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++ + + G + +E H+ + F D ++ S G D +W
Sbjct: 111 FVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ GH + ++ SP+ +G D + ++WD+R+ H + I
Sbjct: 170 DIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ + F P G + TGS D + +++ R
Sbjct: 230 NAICFFPN-GEAICTGSDDASCRLFDLR 256
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 430 GLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY 489
GL+ + RV +RT R+ L GH+ + + ++ + L + +D +WD ++
Sbjct: 36 GLEVVGRV-QMRTRRT---LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVH 91
Query: 490 VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRD--FKLVKSLSGHEAKVTSLD 545
IP S+ + + P G F+ G D ++S R+ K+ + LS H ++
Sbjct: 92 AIPLRSSWVMTCAYAPS-GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR 150
Query: 546 IHPDEQSIATVSHDRWIKLW 565
D+ +I T S D LW
Sbjct: 151 FL-DDNNIVTSSGDTTCALW 169
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 311 (114.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 75/241 (31%), Positives = 121/241 (50%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL-KGHTERATDVTFSPVSNHVATSSADRT 351
++S G+LLA+ S V+IW +P ++ S + + HT V F T+S D+T
Sbjct: 30 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 88
Query: 352 ARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
++W T L + H++ + F P G+ + + S DKT +LWD + + H
Sbjct: 89 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 148
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
V + FHP G+ A+ G+D +VWD+RT R + + H V G+SF P+G +L T
Sbjct: 149 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 208
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
D+T +I DL + + LY + H + V F + G + +G D V VW +F +
Sbjct: 209 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWKS-NFDI 266
Query: 531 V 531
V
Sbjct: 267 V 267
Score = 301 (111.0 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 72/264 (27%), Positives = 119/264 (45%)
Query: 306 LSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW--NTDGSLLN 363
+ + +W M + GH + T V FSP + +A+ S D+T R+W N G
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES-T 59
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
F+ H + + F G+ T S DKT ++W L H V F PDG
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 424 SLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
L S D ++WD + + + H V + F P+G +A G DNT ++WD+R
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 484 KRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTS 543
+ L HS ++ + F P G +L+T S D T+K+ + +L+ +L GH+ T+
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPS-GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 238
Query: 544 LDIHPDEQSIATVSHDRWIKLWST 567
+ + A+ D + +W +
Sbjct: 239 VAFSRTGEYFASGGSDEQVMVWKS 262
Score = 229 (85.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/160 (30%), Positives = 70/160 (43%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +V + F P G L AS D R+W H V + F +G
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
T +D T ++W ++K L+ + H N + KF P +G +V+ S D TVK+W
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSR 139
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ V S H VT +D HP IA D +K+W R
Sbjct: 140 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Score = 201 (75.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/145 (33%), Positives = 70/145 (48%)
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
+D+ VW ++ GH V ++FSP+G+ LA+G D T RIW + V
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 60
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
AH+ + V F +G VT S D TVKVW+ K + SLS H V PD
Sbjct: 61 FRAHTATVRSVHF-CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 551 QSIATVSHDRWIKLWSTRNKGDEHA 575
+ I + S D+ +KLW ++ H+
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHS 144
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 311 (114.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 78/303 (25%), Positives = 139/303 (45%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P++ + ++A+ S +K+W Q LKGHT+ D+
Sbjct: 103 TGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQ 162
Query: 343 VATSSADRTARLWNTDGSL--LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
+ + S+D + +LW+ + L + +GH ++ + F P+G ++ + S D T + WD+ T
Sbjct: 163 LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIST 222
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GH+ V I DG+L AS LD VW T + L L H V +
Sbjct: 223 GYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVE 282
Query: 461 FSP--------------NGYH-LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP 505
++P N H L +G D + + W++ L+ + AH N + + F P
Sbjct: 283 WAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHP 342
Query: 506 QEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ G +L++ + D T++VW + +K++ HE V+++ H + T S D K+W
Sbjct: 343 K-GKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
Query: 566 STR 568
R
Sbjct: 402 ECR 404
Score = 291 (107.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 75/269 (27%), Positives = 122/269 (45%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDR 371
W +PR + L GH T V F P+ +A+ S D T ++W+ + G L T +GH D
Sbjct: 92 W-IPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDA 150
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ-EGHSRSVYGIAFHPDGSLAASCG 430
+ +A +GK L + S D + +LWD + L +GH +V + F P G S
Sbjct: 151 VNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSAS 210
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
D + WD+ TG + GH V I S +G A+ D T +W + + V
Sbjct: 211 RDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV 270
Query: 491 IPAHSNLISQVKFEPQEGYFLVTG--------------SYDMTVKVWSGRDFKLVKSLSG 536
+ H + + V++ P Y VTG S D ++K W+ ++ +L
Sbjct: 271 LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLA 330
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
HE V L HP + + +V+ D+ +++W
Sbjct: 331 HENWVRGLAFHPKGKYLISVADDKTLRVW 359
Score = 244 (91.0 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 73/251 (29%), Positives = 112/251 (44%)
Query: 341 NHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
NH A + R A W GH + R+ FHP + + S D T ++WD +T
Sbjct: 78 NHGAPTRDKRQAADWIPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYET 137
Query: 401 G-VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL-RTGRSILALEGHVKPVLG 458
G +E L+ GH+ +V IA G SC D ++WD +T + +L+GH V
Sbjct: 138 GQLERTLK-GHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSS 196
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDM 518
++F P G + + D+T + WD+ +Y H++ + ++ +G + S D
Sbjct: 197 VTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS-NDGTLFASASLDQ 255
Query: 519 TVKVWS--GRDFKLVKSLSGHEAKVTSLDIHPD--------EQSIATVSH-------DRW 561
TV VWS + KLV L HE V ++ PD +Q +H DR
Sbjct: 256 TVTVWSFATKSAKLV--LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRS 313
Query: 562 IKLWSTRNKGD 572
IK W+ N GD
Sbjct: 314 IKAWNI-NTGD 323
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 325 (119.5 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 90/298 (30%), Positives = 138/298 (46%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G R +S +S D +++A+ G VK+W+ + +GH + +++SP +
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 344 ATSSADRTARLWNT-DGSLLNT-FQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
A+ S D+T RLWN G T F GH + + +AF P G L + S+D+ LWDV +
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSA 293
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKP-VLGIS 460
+ HS V GI DG+L ASC D L R+WD TG+ + L P V +
Sbjct: 294 RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVK 353
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN----LISQVKFEPQE------GY- 509
FSPNG ++ D+ R+WD + + L HSN L Q GY
Sbjct: 354 FSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYA 413
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH--DRWIKLW 565
F V+GS D + W K+++ + H+ V +D + VS D +++W
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVW 471
Score = 324 (119.1 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 78/229 (34%), Positives = 119/229 (51%)
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAF 377
QKF L+GH + V FSP ++ +A+ AD ++W G L+ TF+GHL ++ +++
Sbjct: 168 QKF-LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALAR 436
P G + + S DKT RLW+V TG GH VY IAF P G++ S D
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 437 VWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
+WD+R+ R + +L H PV GI +G +A+ D RIWD + L + N
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 497 L-ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+S VKF P G +++ + D V++W + + +K+ GH K SL
Sbjct: 347 PPVSSVKFSPN-GKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSL 394
Score = 288 (106.4 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 60/164 (36%), Positives = 92/164 (56%)
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
L GH R V + F PD S+ AS G D +VW TG+ I EGH+ + IS+SP+G
Sbjct: 171 LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDG 230
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIP--AHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+A+G +D T R+W++ K+ + P H N + + F P+ G LV+GSYD V +W
Sbjct: 231 ATIASGSDDKTIRLWNVLTGKA-HPTPFIGHHNYVYAIAFSPK-GNMLVSGSYDEAVFLW 288
Query: 524 SGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
R +++KSL H V+ +D+ D IA+ + D +++W T
Sbjct: 289 DVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDT 332
Score = 184 (69.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 55/206 (26%), Positives = 91/206 (44%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S GN+L + S V +W + + +L H++ + + +A+ + D
Sbjct: 268 AFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLV 327
Query: 353 RLWNTD-GSLLNTFQGHLDR--LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
R+W+T G L T H D ++ + F P+GKY+ + D RLWD G L +G
Sbjct: 328 RIWDTSTGQCLRTLV-HEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQG 386
Query: 410 HSRSVYGI--AFH----------PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL 457
HS Y + AF P + A S D WD+ T + + +E H VL
Sbjct: 387 HSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVL 446
Query: 458 GISF--SPNGYHLATGGEDNTCRIWD 481
G+ + G + + G D T R+W+
Sbjct: 447 GVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 163 (62.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 53/168 (31%), Positives = 73/168 (43%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER-ATDVTFSPVSNHVATS 346
P+SG DG L+A+ + G+V+IW Q L + V FSP +V
Sbjct: 305 PVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAW 364
Query: 347 SADRTARLWN-TDGSLLNTFQGHLDRLARM--AFHPSGKYL-GTT---------SFDKTW 393
+ D RLW+ +G L T+QGH ++ + AF G+ + G T S D
Sbjct: 365 TLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAI 424
Query: 394 RLWDVDTGVELLLQEGHSRSVYGI--AFHPDGSLAASCGLDALARVWD 439
WDV T L E H V G+ +G SCGLD RVW+
Sbjct: 425 LCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF 503
R L GH++ V + FSP+ +A+GG D ++W K +Y H IS + +
Sbjct: 167 RQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 504 EPQEGYFLVTGSYDMTVKVWSGRDFKLVKS-LSGHEAKVTSLDIHPDEQSIATVSHDRWI 562
P +G + +GS D T+++W+ K + GH V ++ P + + S+D +
Sbjct: 227 SP-DGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAV 285
Query: 563 KLWSTRN 569
LW R+
Sbjct: 286 FLWDVRS 292
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 327 (120.2 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 78/225 (34%), Positives = 112/225 (49%)
Query: 260 ESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQ 319
E DDE D A +++ L C R L+ S G L + +S ++ W +
Sbjct: 340 EEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSS----GLLSCSEDMS--IRYWDLGSFT 393
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFH 378
+GH D+ SP S + A+ S DRTARLW+ D + L + GHL + + FH
Sbjct: 394 NTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 453
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P+ YL T S DKT RLW G + L GH V +AF P+G AS G D ++W
Sbjct: 454 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 513
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
DL +G L GH + ++FSP+ +A+ DN+ R+WD+R
Sbjct: 514 DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 558
Score = 299 (110.3 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 66/206 (32%), Positives = 101/206 (49%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAFHPSG 381
L+GH F S+ + + S D + R W+ GS NT +QGH + + P
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDLDISPYS 414
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
Y + S D+T RLW D L + GH V + FHP+ + A+ D R+W +
Sbjct: 415 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
G S+ GH PVL ++FSPNG +LA+ GED ++WDL + H++ I+ +
Sbjct: 475 QGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL 534
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRD 527
F P + + S D +V+VW R+
Sbjct: 535 TFSPDSS-LIASASMDNSVRVWDIRN 559
Score = 273 (101.2 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 57/169 (33%), Positives = 82/169 (48%)
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D + G E+ + GH VY F D S SC D R WDL + + + +GH PV
Sbjct: 346 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 405
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
+ SP + A+G D T R+W + L + H + VKF P Y L TGS
Sbjct: 406 WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGST 464
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
D TV++WS + V+ +GH V SL P+ + +A+ D+ +KLW
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 513
Score = 258 (95.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 53/159 (33%), Positives = 80/159 (50%)
Query: 302 ATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GS 360
A+ S ++WS R GH V F P SN++AT S D+T RLW+ G+
Sbjct: 418 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
+ F GH + +AF P+GKYL + D+ +LWD+ +G GH+ ++ + F
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
PD SL AS +D RVWD+R +G ++G+
Sbjct: 538 PDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D G + L GH PV F + L + ED + R WDL + + H+ +
Sbjct: 346 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 405
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
+ P YF +GS+D T ++WS R + L + +GH A V + HP+ +AT S
Sbjct: 406 WDLDISPYSLYF-ASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNSNYLATGS 463
Query: 558 HDRWIKLWSTR 568
D+ ++LWS +
Sbjct: 464 TDKTVRLWSAQ 474
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ ++S +G LA++ +K+W + + L+GHT+ T +TFSP S+
Sbjct: 483 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL 542
Query: 343 VATSSADRTARLWNTDGSLLNT 364
+A++S D + R+W+ + +T
Sbjct: 543 IASASMDNSVRVWDIRNTYCST 564
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 309 (113.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 84/285 (29%), Positives = 135/285 (47%)
Query: 292 CS-YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C+ +S D + +SS G + IW K A+ T ++P N VA D
Sbjct: 75 CTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDN 134
Query: 351 TARLW--NTDGSLL---NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
++ +D + T H ++ + S + + T S D T LWDV++G L
Sbjct: 135 KVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQ 194
Query: 406 LQEGHSRSVYGIAFHPD--GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
GHS V I P+ G+ S D +A +WD+R+G + + EGH V + F P
Sbjct: 195 SFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHP 254
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL--ISQVKFEPQEGYFLVTGSYDMTVK 521
G +ATG +D++CR++D+R + + V S + ++ V F G L G D TV
Sbjct: 255 CGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVS-GRLLFAGYNDYTVN 313
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+W + V L GHE KV+ + + PD +++T S D I++W+
Sbjct: 314 LWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVWA 358
Score = 292 (107.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/245 (30%), Positives = 123/245 (50%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK---G-HTERATDVTFSPVSNHVA 344
+ C+Y+ GN +A L V ++ + ++ +A K G HT + + +
Sbjct: 115 IMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQIL 174
Query: 345 TSSADRTARLWNTD-GSLLNTFQGHL-DRLA-RMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
T S D T LW+ + G LL +F GH D +A +A + +G + S D+ +WD+ +G
Sbjct: 175 TGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSG 234
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGR--SILALEGHVKPVLGI 459
+ EGH V + FHP G A+ D+ R++D+R R ++ A E + V +
Sbjct: 235 HVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSV 294
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
FS +G L G D T +WD K + + ++ H N +S V+ P +G L TGS+D T
Sbjct: 295 DFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSP-DGTALSTGSWDYT 353
Query: 520 VKVWS 524
++VW+
Sbjct: 354 IRVWA 358
Score = 199 (75.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 59/234 (25%), Positives = 102/234 (43%)
Query: 341 NHVATSS-ADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
N V S+ A+R ++ + +GH ++ + P +++ ++S D +WD
Sbjct: 41 NDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAF 100
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE---GHVKPV 456
T + + + A+ P G+ A GLD V+ + + + A + G
Sbjct: 101 TTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSY 160
Query: 457 LGISFSPNG-YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTG 514
+ PN + TG D+TC +WD+ + L HS + + P E G V+G
Sbjct: 161 MSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSG 220
Query: 515 SYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
S D +W R +V+S GH++ V S+ HP +IAT S D +L+ R
Sbjct: 221 SCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMR 274
Score = 188 (71.2 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 58/254 (22%), Positives = 106/254 (41%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
LKGH + +SP H+ +SS D +W+ + + + A+ PSG
Sbjct: 66 LKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGN 125
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQE---GHSRSVYGIAFHP--DGSLAASCGLDALARV 437
++ D ++ + + E+ ++ G S +P D + G D+ +
Sbjct: 126 FVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSG-DSTCAL 184
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPN--GYHLATGGEDNTCRIWDLRKRKSLYVIPAHS 495
WD+ +G+ + + GH V+ I +PN G +G D IWD+R + H
Sbjct: 185 WDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQ 244
Query: 496 NLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA--KVTSLDIHPDEQSI 553
+ ++ VKF P G + TGS D + +++ R + V + V S+D + +
Sbjct: 245 SDVNSVKFHPC-GDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLL 303
Query: 554 ATVSHDRWIKLWST 567
+D + LW T
Sbjct: 304 FAGYNDYTVNLWDT 317
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 326 (119.8 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 78/225 (34%), Positives = 112/225 (49%)
Query: 260 ESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQ 319
E DDE D A +++ L C R L+ S G L + +S ++ W +
Sbjct: 322 EEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSS----GLLSCSEDMS--IRYWDLGSFT 375
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFH 378
+GH D+ SP S + A+ S DRTARLW+ D + L + GHL + + FH
Sbjct: 376 NTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 435
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P+ YL T S DKT RLW G + L GH V +AF P+G AS G D ++W
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
DL +G L GH + ++FSP+ +A+ DN+ R+WD+R
Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR 540
Score = 305 (112.4 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 67/206 (32%), Positives = 102/206 (49%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAFHPSG 381
L+GH F S+ + + S D + R W+ GS NT +QGH + + P
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDLDISPYS 396
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
Y + S D+T RLW D L + GH V + FHP+ + A+ D R+W +
Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
G S+ GH PVL ++FSPNG +LA+ GED ++WDL + H++ I+ +
Sbjct: 457 QGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL 516
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRD 527
F P G + + S D +V+VW R+
Sbjct: 517 TFSPDSG-LIASASMDNSVRVWDIRN 541
Score = 273 (101.2 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 57/169 (33%), Positives = 82/169 (48%)
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D + G E+ + GH VY F D S SC D R WDL + + + +GH PV
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 387
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
+ SP + A+G D T R+W + L + H + VKF P Y L TGS
Sbjct: 388 WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGST 446
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
D TV++WS + V+ +GH V SL P+ + +A+ D+ +KLW
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 256 (95.2 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 52/159 (32%), Positives = 79/159 (49%)
Query: 302 ATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GS 360
A+ S ++WS R GH V F P SN++AT S D+T RLW+ G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
+ F GH + +AF P+GKYL + D+ +LWD+ +G GH+ ++ + F
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
PD L AS +D RVWD+R +G ++G+
Sbjct: 520 PDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGV 558
Score = 168 (64.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D G + L GH PV F + L + ED + R WDL + + H+ +
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 387
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
+ P YF +GS+D T ++WS R + L + +GH A V + HP+ +AT S
Sbjct: 388 WDLDISPYSLYF-ASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNSNYLATGS 445
Query: 558 HDRWIKLWSTR 568
D+ ++LWS +
Sbjct: 446 TDKTVRLWSAQ 456
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ ++S +G LA++ +K+W + + L+GHT+ T +TFSP S
Sbjct: 465 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGL 524
Query: 343 VATSSADRTARLW---NT------DGS---LLNTFQGHLDRLARMAF 377
+A++S D + R+W NT DGS L+ + G + + + F
Sbjct: 525 IASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQF 571
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 326 (119.8 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 78/225 (34%), Positives = 111/225 (49%)
Query: 260 ESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQ 319
E DDE D +++ L C R L+ S G L + +S ++ W +
Sbjct: 322 EEEDDEDDDVGTEMKVLRGHCGPVYSTRFLADSS----GLLSCSEDMS--IRYWDLGSFT 375
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFH 378
+GH DV SP S + A+ S DRTARLW+ D + L + GHL + + FH
Sbjct: 376 NTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 435
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P+ YL T S DKT RLW G + L GH V +AF P+G AS G D ++W
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
DL +G L GH + ++FSP+ +A+ DN+ R+WD+R
Sbjct: 496 DLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 300 (110.7 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 66/210 (31%), Positives = 102/210 (48%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAF 377
+ L+GH F S+ + + S D + R W+ GS NT +QGH + +
Sbjct: 334 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDVDI 392
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
P Y + S D+T RLW D L + GH V + FHP+ + A+ D R+
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
W + G S+ GH PVL ++FSPNG +LA+ GED ++WDL + H++
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDN 512
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
I+ + F P + + S D +V+VW R+
Sbjct: 513 ITSLTFSPDSS-LIASASMDNSVRVWDIRN 541
Score = 278 (102.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 58/169 (34%), Positives = 82/169 (48%)
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D D G E+ + GH VY F D S SC D R WDL + + + +GH PV
Sbjct: 328 DDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 387
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
+ SP + A+G D T R+W + L + H + VKF P Y L TGS
Sbjct: 388 WDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGST 446
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
D TV++WS + V+ +GH V SL P+ + +A+ D+ +KLW
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 263 (97.6 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 53/159 (33%), Positives = 80/159 (50%)
Query: 302 ATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GS 360
A+ S ++WS R GH V F P SN++AT S D+T RLW+ G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
+ F GH + +AF P+GKYL + D+ +LWD+ +G GH+ ++ + F
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFS 519
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
PD SL AS +D RVWD+R +G ++G+
Sbjct: 520 PDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGV 558
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVK 502
G + L GH PV F + L + ED + R WDL + + H+ + V
Sbjct: 332 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 503 FEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
P YF +GS+D T ++WS R + L + +GH A V + HP+ +AT S D+
Sbjct: 392 ISPYSLYF-ASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 562 IKLWSTR 568
++LWS +
Sbjct: 450 VRLWSAQ 456
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 321 (118.1 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 72/218 (33%), Positives = 114/218 (52%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ QGHL + +AF PS ++ T S D+T ++WDV TGV L GH V
Sbjct: 156 WHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQV 215
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+A + S G D + WDL + I + GH+ V ++ P + TGG D
Sbjct: 216 RGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRD 275
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+ CR+WD+R + ++V+P S++ S V P + ++TGS+D T+K W R K + ++
Sbjct: 276 SVCRVWDIRTKMQIFVLPHDSDVFS-VLARPTDPQ-VITGSHDSTIKFWDLRYGKSMATI 333
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
+ H+ V ++ +HP E + S D IK +S KG+
Sbjct: 334 TNHKKTVRAMALHPKENDFVSASADN-IKKFSLP-KGE 369
Score = 285 (105.4 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 72/242 (29%), Positives = 111/242 (45%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRL----QKFSALKGHTERATDVTFSPVSNHV 343
P G S+S + NL + + + W P + + L+GH V F P +
Sbjct: 128 PAPG-SFS-ERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWF 185
Query: 344 ATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
T SADRT ++W+ G L T GH+ ++ +A Y+ + DK + WD++
Sbjct: 186 CTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 245
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
+ GH VY +A HP + + G D++ RVWD+RT I L H V +
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLAR 304
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
P + TG D+T + WDLR KS+ I H + + P+E F V+ S D +K
Sbjct: 305 PTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDF-VSASAD-NIKK 362
Query: 523 WS 524
+S
Sbjct: 363 FS 364
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 55/256 (21%), Positives = 101/256 (39%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + G + S+ + ++ VK W + + + + GH +
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
P + V T D R+W+ + H + + P+ + T S D T + WD
Sbjct: 264 PTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGR---SILALEGHVK 454
+ G + H ++V +A HP + S D + + + L G ++L+L+ +
Sbjct: 324 LRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK-FSLPKGEFCHNMLSLQRDI- 381
Query: 455 PVLGISFSPNGYHLATGGEDNTCRIWDLR-----KRKSLYVIPA--HSNLISQVKFEPQE 507
+ ++ + +G + TGG+ WD + +R V P S Q
Sbjct: 382 -INAVAVNEDGV-MVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQT 439
Query: 508 GYFLVTGSYDMTVKVW 523
G LVT D T+K+W
Sbjct: 440 GSRLVTCEGDKTIKMW 455
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 306 (112.8 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 76/279 (27%), Positives = 134/279 (48%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
G + + + T SL +VK+W RL +L+GH V S A+SS
Sbjct: 25 GTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 84
Query: 349 DRTARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D RLW+ D G + + G +D +AF P +YL T + ++ V++G +
Sbjct: 85 DAHIRLWDLDNGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ + + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
L T +D +I+D++ + H++ + V F P + +F V+ S D +VKVW
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVG 262
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V + H+ +V + + + I +V D+ I ++
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 242 (90.2 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V T S D ++W L+ + +GH + + + ++S D RLW
Sbjct: 32 SETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D+D G ++ + + +AF PD A+ ++ + +G+ +L+ K +
Sbjct: 92 DLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
D +K++ + L +LSGH + V ++ PD+ + S D+ +K+W + H
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 268
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 61/264 (23%), Positives = 117/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + E L L + G + SH + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S ++AT + ++ + G + + +A+ P
Sbjct: 99 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + V+
Sbjct: 279 GVKYNGN-GSKIVSVGDDQEIHVY 301
Score = 197 (74.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 49/190 (25%), Positives = 88/190 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT + G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH+
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ T + H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
G+D ++D
Sbjct: 293 GDDQEIHVYD 302
Score = 142 (55.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 317 (116.6 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 65/211 (30%), Positives = 109/211 (51%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ L+ GHL + +A P+ ++ + + D+T ++W++ TG L GH +V
Sbjct: 129 WHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTV 188
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+A P SCG D + + WDL T + I GH+ V ++ P L TGG D
Sbjct: 189 RGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRD 248
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
R+WD+R R +++V+ H+ ++ V+ + + ++TGS D TV++W K + L
Sbjct: 249 GVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQ-VITGSLDATVRLWDLAAGKTMGVL 307
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ H+ + SL HP E + A+ S IK W
Sbjct: 308 THHKKGIRSLATHPREFTFASASTGS-IKQW 337
Score = 305 (112.4 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 70/239 (29%), Positives = 112/239 (46%)
Query: 313 WSMP-RLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLD 370
W P +L + + GH + P + A+ + DRT ++WN G+L T GH+
Sbjct: 129 WHAPWKLMR--VISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHIS 186
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ +A P YL + DK + WD++T + GH VY +A HP L + G
Sbjct: 187 TVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGG 246
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
D +ARVWD+RT +I L GH V + + TG D T R+WDL K++ V
Sbjct: 247 RDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGV 306
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
+ H I + P+E F + ++K W + +++ GH A + +L ++ D
Sbjct: 307 LTHHKKGIRSLATHPRE--FTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLSVNED 363
Score = 180 (68.4 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 55/265 (20%), Positives = 111/265 (41%)
Query: 310 VKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGH 368
+KIW++ L GH + SP ++ + D+ + W+ + ++ + GH
Sbjct: 167 IKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGH 226
Query: 369 LDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAAS 428
L + +A HP L T D R+WD+ T + + GH+ +V + +
Sbjct: 227 LSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVIT 286
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
LDA R+WDL G+++ L H K + ++ P + A+ + + W + +
Sbjct: 287 GSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASAST-GSIKQWKCPGGEFM 345
Query: 489 YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGRDFKLVKSLS--GH---EAK 540
H+ +I+ + E L +G + ++ W +G ++ + + + G EA
Sbjct: 346 QNFEGHNAIINTLSVN--EDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAG 403
Query: 541 VTSLDIHPDEQSIATVSHDRWIKLW 565
+ + + T D+ IK+W
Sbjct: 404 IMTSTFDRTGLRLITGEADKTIKVW 428
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 51/191 (26%), Positives = 80/191 (41%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-T 357
+LL T GV ++W M L GHT DV V T S D T RLW+
Sbjct: 240 DLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLA 299
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G + H + +A HP ++ ++ + + W G + EGH+ + +
Sbjct: 300 AGKTMGVLTHHKKGIRSLATHPR-EFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTL 358
Query: 418 AFHPDGSLAASCGLDALARVWDLRTG---RSI--LALEGHVKPVLGI---SFSPNGYHLA 469
+ + D L + G + WD +TG ++I A G ++ GI +F G L
Sbjct: 359 SVNEDNVLFSG-GDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLI 417
Query: 470 TGGEDNTCRIW 480
TG D T ++W
Sbjct: 418 TGEADKTIKVW 428
Score = 148 (57.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V ++ PN A+G D T +IW+L + H + + + P+
Sbjct: 139 ISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHP 198
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V +L +HP + T D ++W R
Sbjct: 199 YLFSCGE-DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMR 257
Query: 569 NKGDEHAM 576
+ + H +
Sbjct: 258 TRSNIHVL 265
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 326 (119.8 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 80/275 (29%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 444 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 501
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 502 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 559
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 560 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 615
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 616 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 672
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW R
Sbjct: 673 PHKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLR 705
Score = 270 (100.1 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 475
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 476 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 531
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 532 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 589
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 590 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 644
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 645 NILVSGNADSTVKIWDIK 662
Score = 263 (97.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 66/240 (27%), Positives = 115/240 (47%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 485 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 542
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 543 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 601 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 656
Query: 478 RIWDLRKRKSLYVIPA---HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + H + ++ ++F F++T S D TVK+W R + +++L
Sbjct: 657 KIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLRTGEFIRNL 713
Score = 197 (74.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 430 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 488
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 489 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 544
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 545 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 601
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 602 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 630
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 562 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 619
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 620 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQ 677
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDLRTG R+++ LE
Sbjct: 678 SAVTCLQFNKNFVITSSD--DGTVKLWDLRTGEFIRNLVTLE 717
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 323 (118.8 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 79/275 (28%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 271 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 328
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 329 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 386
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 387 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 442
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 443 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 499
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW +
Sbjct: 500 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 532
Score = 272 (100.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 303 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 358
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 359 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 416
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 417 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 471
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 472 NILVSGNADSTVKIWDIK 489
Score = 260 (96.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 65/240 (27%), Positives = 115/240 (47%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 312 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 369
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 370 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 428 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 483
Query: 478 RIWDLRKRKSLYVIPA---HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + H + ++ ++F F++T S D TVK+W + + +++L
Sbjct: 484 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLKTGEFIRNL 540
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 257 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 315
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 316 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 371
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 372 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 428
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 429 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 457
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 389 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 446
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 447 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 504
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDL+TG R+++ LE
Sbjct: 505 SAVTCLQFNKNFVITSSD--DGTVKLWDLKTGEFIRNLVTLE 544
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 323 (118.8 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 79/275 (28%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 370
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 371 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 428
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 429 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 484
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 485 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 541
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW +
Sbjct: 542 PSKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 574
Score = 272 (100.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 345 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 400
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 401 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 458
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 459 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 513
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 514 NILVSGNADSTVKIWDIK 531
Score = 262 (97.3 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 411
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 412 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 470 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 525
Query: 478 RIWDLRKRKSLYVI--PA-HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + P+ H + ++ ++F F++T S D TVK+W + + +++L
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 299 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 357
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 358 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 413
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 414 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 471 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 431 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 488
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 489 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDL+TG R+++ LE
Sbjct: 547 SAVTCLQFNKNFVITSSD--DGTVKLWDLKTGEFIRNLVTLE 586
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 324 (119.1 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 75/250 (30%), Positives = 117/250 (46%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT V + + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G+++ + S D +LWD+ + GHS++V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F PN Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R WDL K + + I + + F P +G L +G D +++V+ + +
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSILFNP-DGCCLYSGCQD-SLRVYGWEPERCFDVVLV 270
Query: 537 HEAKVTSLDI 546
H KV L I
Sbjct: 271 HWGKVADLAI 280
Score = 290 (107.1 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 62/232 (26%), Positives = 108/232 (46%)
Query: 320 KFSALKGHTERATDVTFSPVSNHV-ATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
K + H + + S + AT D LW+ + + + + GH + +
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
+ + + S + R+WD++ L GH ++ + FHP G AS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+R + GH + V + FSP+G LA+ +D+T ++WDL K + P H+
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
++ V+F P E Y L +GS D T++ W F++V + G V S+ +PD
Sbjct: 192 VNVVEFHPNE-YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPD 242
Score = 261 (96.9 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 60/214 (28%), Positives = 99/214 (46%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ + L+ S SG +++W + + L GH + F P
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++GH + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GH+ V + FHP+ L AS D R WDL + + +EG PV I
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSIL 238
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
F+P+G L +G +D+ R++ + V+ H
Sbjct: 239 FNPDGCCLYSGCQDSL-RVYGWEPERCFDVVLVH 271
Score = 258 (95.9 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D LW ++ ++ GH+ V + + L + RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +A+G +D ++WD+R++ ++ HS +
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G +L + + D TVK+W K++ GH V ++ HP+E +A+ S D
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 560 RWIKLW 565
R I+ W
Sbjct: 211 RTIRFW 216
Score = 192 (72.6 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 46/136 (33%), Positives = 73/136 (53%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG +G LATGG+D +W + K + + H++
Sbjct: 11 WKLQ---EIVAHASNVSSLVLG---KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 497 LISQVKFE-PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT 555
+ V+ P+E +V GS +++VW K++++L GH+A + SLD HP + +A+
Sbjct: 65 PVESVRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 556 VSHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 123 GSQDTNIKLWDIRRKG 138
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 323 (118.8 bits), Expect = 6.4e-27, P = 6.4e-27
Identities = 79/275 (28%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 368
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 369 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 426
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 427 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 482
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 483 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 539
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW +
Sbjct: 540 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 572
Score = 272 (100.8 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 343 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 398
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 399 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 456
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 457 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 511
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 512 NILVSGNADSTVKIWDIK 529
Score = 260 (96.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 65/240 (27%), Positives = 115/240 (47%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 352 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 409
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 410 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 468 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 523
Query: 478 RIWDLRKRKSLYVIPA---HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + H + ++ ++F F++T S D TVK+W + + +++L
Sbjct: 524 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLKTGEFIRNL 580
Score = 197 (74.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 297 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 355
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 356 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 411
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 412 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 469 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 497
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 429 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 486
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 487 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 544
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDL+TG R+++ LE
Sbjct: 545 SAVTCLQFNKNFVITSSD--DGTVKLWDLKTGEFIRNLVTLE 584
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 323 (118.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 79/275 (28%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 370
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 371 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 428
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 429 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 484
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 485 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 541
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW +
Sbjct: 542 PSKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 574
Score = 272 (100.8 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 345 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 400
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 401 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 458
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 459 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 513
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 514 NILVSGNADSTVKIWDIK 531
Score = 262 (97.3 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 411
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 412 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 470 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 525
Query: 478 RIWDLRKRKSLYVI--PA-HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + P+ H + ++ ++F F++T S D TVK+W + + +++L
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 197 (74.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 299 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 357
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 358 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 413
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 414 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 471 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 431 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 488
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 489 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDL+TG R+++ LE
Sbjct: 547 SAVTCLQFNKNFVITSSD--DGTVKLWDLKTGEFIRNLVTLE 586
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 322 (118.4 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 68/197 (34%), Positives = 100/197 (50%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ + D + L + S ++ W + +GH DV SP S + A+ S
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGS 403
Query: 348 ADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
DRTARLW+ D + L + GHL + + FHP+ YL T S DKT RLW G + L
Sbjct: 404 HDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 463
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH V ++F P+G AS G D ++WDL +G L GH + ++FSP+
Sbjct: 464 FTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSG 523
Query: 467 HLATGGEDNTCRIWDLR 483
+A+ DN+ R+WD+R
Sbjct: 524 LIASASMDNSVRVWDIR 540
Score = 308 (113.5 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 68/205 (33%), Positives = 101/205 (49%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAFHPSG 381
L+GH F S+ + + S D + R W+ GS NT +QGH + + P
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDVDISPFS 396
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
Y + S D+T RLW D L + GH V + FHP+ + A+ D R+W +
Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
G S+ GH PVL +SFSPNG +LA+ GED ++WDL + H++ I+ +
Sbjct: 457 QGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSL 516
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGR 526
F P G + + S D +V+VW R
Sbjct: 517 AFSPDSG-LIASASMDNSVRVWDIR 540
Score = 277 (102.6 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 57/167 (34%), Positives = 82/167 (49%)
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
+TG E+ + GH VY F D S SC D R WDL + + + +GH PV
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDM 518
+ SP + A+G D T R+W + L + H + VKF P Y L TGS D
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGSTDK 448
Query: 519 TVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
TV++WS + V+ +GH V SL P+ + +A+ D+ +KLW
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 258 (95.9 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 53/159 (33%), Positives = 81/159 (50%)
Query: 302 ATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GS 360
A+ S ++WS R GH V F P SN++AT S D+T RLW+ G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
+ F GH + ++F P+GKYL + D+ +LWD+ +G GH+ S+ +AF
Sbjct: 460 SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFS 519
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
PD L AS +D RVWD+R+ +G ++G+
Sbjct: 520 PDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 558
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
TG + L GH PV F + L + ED + R WDL + + H+ + V
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 502 KFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
P YF +GS+D T ++WS R + L + +GH A V + HP+ +AT S D+
Sbjct: 391 DISPFSLYF-ASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 561 WIKLWSTR 568
++LWS +
Sbjct: 449 TVRLWSAQ 456
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ S+S +G LA++ +K+W + F L+GHT+ T + FSP S
Sbjct: 465 TGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGL 524
Query: 343 VATSSADRTARLWNTDGSLLNT 364
+A++S D + R+W+ + NT
Sbjct: 525 IASASMDNSVRVWDIRSTCCNT 546
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 304 (112.1 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 75/281 (26%), Positives = 131/281 (46%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
++ D L ++S G + +W K A+ + ++P + VA D
Sbjct: 63 WASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
+++ +G++ GH L+ F + + T+S D T LWD++TG +
Sbjct: 123 IYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIV-TSSGDMTCALWDIETGQQCTAFT 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ V ++ PD S DA A++WD+R G GH + ++F P+G
Sbjct: 182 GHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAF 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
ATG +D TCR++D+R + L + +H N+I + V F + G L G D VW
Sbjct: 242 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFS-KSGRLLFAGYDDFNCNVWDS 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ L+GH+ +V+ L + D ++ T S D ++K+W+
Sbjct: 300 MRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 276 (102.2 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 68/241 (28%), Positives = 118/241 (48%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ G+ +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P + + + D + +LWD+ G+
Sbjct: 162 GDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P G+ A+ DA R++D+R + LA+ H + GI+ FS
Sbjct: 222 FPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQE-LAMYSHDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD +++ V+ H N +S + ++G + TGS+D +K+W
Sbjct: 281 SGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVT-EDGMAVCTGSWDSFLKIW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 219 (82.2 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 69/220 (31%), Positives = 100/220 (45%)
Query: 268 YALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
Y+LK E E G LS C + D N + TSS +W + Q+ +A G
Sbjct: 124 YSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTSSGDMTCALWDIETGQQCTAFTG 182
Query: 327 HTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT ++ SP + + D +A+LW+ DG TF GH + +AF PSG
Sbjct: 183 HTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFA 242
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LR 441
T S D T RL+D+ EL + H + GI AF G L + D VWD +R
Sbjct: 243 TGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMR 301
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
R+ + L GH V + + +G + TG D+ +IW+
Sbjct: 302 QERAGV-LAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 54/209 (25%), Positives = 91/209 (43%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
S A GLD + ++ L+T G R L GH + F + + T D TC +
Sbjct: 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + H+ + + P F ++G+ D + K+W RD ++ GHE+
Sbjct: 169 WDIETGQQCTAFTGHTGDVMSLSLSPDFRTF-ISGACDASAKLWDIRDGMCKQTFPGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P + AT S D +L+ R
Sbjct: 228 DINAVAFFPSGNAFATGSDDATCRLFDIR 256
Score = 183 (69.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + + ++ S ++ ++S D +W++ + ++ + A+ PSG
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGS 110
Query: 383 YLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVW 438
++ D ++ + T G + +E GH+ + F D + S G D +W
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-DMTCALW 169
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+ TG+ A GH V+ +S SP+ +G D + ++WD+R P H + I
Sbjct: 170 DIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDI 229
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ V F P F TGS D T +++ R
Sbjct: 230 NAVAFFPSGNAF-ATGSDDATCRLFDIR 256
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 47/165 (28%), Positives = 78/165 (47%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +Y + + D S D VWD T + A+ V+ +++P+G +
Sbjct: 53 GHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV 112
Query: 469 ATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
A GG DN C I+ L+ R+ ++ V +P H+ +S +F +VT S DMT +W
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IVTSSGDMTCALWD 170
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + +GH V SL + PD ++ + + D KLW R+
Sbjct: 171 IETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRD 215
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 35/149 (23%), Positives = 67/149 (44%)
Query: 422 DGSLAA-SCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
D +LA + L+ + R+ +RT R+ L GH+ + + ++ + +L + +D +W
Sbjct: 27 DTTLATVASNLEPIGRI-QMRTRRT---LRGHLAKIYAMHWASDSRNLVSASQDGKLIVW 82
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR----DFKLVKSLSG 536
D ++ IP S+ + + P G F+ G D ++S + + ++ + L G
Sbjct: 83 DSYTTNKVHAIPLRSSWVMTCAYAPS-GSFVACGGLDNICSIYSLKTREGNVRVSRELPG 141
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H ++ D Q I T S D LW
Sbjct: 142 HTGYLSCCRFLDDNQ-IVTSSGDMTCALW 169
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 321 (118.1 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 68/197 (34%), Positives = 101/197 (51%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ + D + L + S ++ W + +GH D+ SP S + A++S
Sbjct: 344 PVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASAS 403
Query: 348 ADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
DRTARLW+ D + L + GHL + + FHP+ YL T S DKT RLW G + L
Sbjct: 404 HDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRL 463
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH V +AF P+G AS G D ++WDL +G L GH + ++FSP+
Sbjct: 464 FTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSS 523
Query: 467 HLATGGEDNTCRIWDLR 483
+A+ DN+ R+WD+R
Sbjct: 524 LIASASMDNSVRVWDIR 540
Score = 293 (108.2 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 65/206 (31%), Positives = 100/206 (48%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAFHPSG 381
L+GH F S+ + + S D + R W+ S NT +QGH + + P
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLR-SFTNTVLYQGHAYPVWDLDISPCS 396
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
Y + S D+T RLW D L + GH V + FHP+ + A+ D R+W +
Sbjct: 397 LYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ 456
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
G S+ GH PVL ++FSPNG +LA+ GED ++WDL + H++ I+ +
Sbjct: 457 QGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL 516
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRD 527
F P + + S D +V+VW R+
Sbjct: 517 TFSPDSS-LIASASMDNSVRVWDIRN 541
Score = 270 (100.1 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 327 HTERATDVT-FSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLG 385
+TE+ + SP S +A + +LW+ L + + HL ++R+ L
Sbjct: 266 NTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSKKLKS-EPHLVDVSRIR-------LA 317
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
D+ D G E+ + GH VY F D S SC D R WDLR+ +
Sbjct: 318 CDILDEEEEE-DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTN 376
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP 505
+ +GH PV + SP + A+ D T R+W + L + H + VKF P
Sbjct: 377 TVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHP 436
Query: 506 QEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
Y L TGS D TV++WS + V+ +GH V +L P+ + +A+ D+ +KLW
Sbjct: 437 NSNY-LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLW 495
Score = 264 (98.0 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 58/175 (33%), Positives = 87/175 (49%)
Query: 286 DRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVAT 345
D +S CS A++S ++WS R GH V F P SN++AT
Sbjct: 389 DLDISPCSL-----YFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLAT 443
Query: 346 SSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
S D+T RLW+T G+ + F GH + +AF P+GKYL + D+ +LWD+ +G
Sbjct: 444 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 405 LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
GH+ ++ + F PD SL AS +D RVWD+R +G ++G+
Sbjct: 504 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGV 558
Score = 166 (63.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D G + L GH PV F + L + ED + R WDLR + + H+ +
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV 387
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
+ P YF + S+D T ++WS R + L + +GH V + HP+ +AT S
Sbjct: 388 WDLDISPCSLYF-ASASHDRTARLWSFDRTYPL-RIYAGHLLDVDCVKFHPNSNYLATGS 445
Query: 558 HDRWIKLWSTR 568
D+ ++LWST+
Sbjct: 446 TDKTVRLWSTQ 456
Score = 127 (49.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ ++S +G LA++ +K+W + + L+GHT+ T +TFSP S+
Sbjct: 465 TGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL 524
Query: 343 VATSSADRTARLWNTDGSLLN 363
+A++S D + R+W+ + N
Sbjct: 525 IASASMDNSVRVWDIRNTYCN 545
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 303 (111.7 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 75/274 (27%), Positives = 133/274 (48%)
Query: 297 DGN-LLATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
DG+ + + SL +VK+W +L L+GH V S + A+SS D R
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIR 89
Query: 354 LWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
LW+ + G + + G +D + +AF P ++L T S ++ V+TG + +
Sbjct: 90 LWDLETGKQIKSIDAGPVDAWS-LAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRG 148
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
+ + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+ L T
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
+D +I+D++ + H + + V F P + +F V+ S D +VKVW V
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHF-VSSSSDKSVKVWDAGTRTCV 267
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ H+ +V + + I +V D+ I ++
Sbjct: 268 HTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 265 (98.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 63/238 (26%), Positives = 115/238 (48%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V + S D ++W + L+ T +GH + + +G ++S D RLW
Sbjct: 32 SETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++TG ++ + + +AF PD A+ ++ + TG+ +L+ K +
Sbjct: 92 DLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
D +K++ + L +LSGH + V ++ PD+ + S D+ +K+W + H
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVH 268
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 63/264 (23%), Positives = 117/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + E L L T G + SH G++ A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S +AT S ++ + G + + +A+ P
Sbjct: 99 IKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD R ++ H + +
Sbjct: 219 VQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + ++
Sbjct: 279 GVKYNGS-GSKIVSVGDDQEIHIY 301
Score = 246 (91.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 64/218 (29%), Positives = 102/218 (46%)
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTT----SFD---KTWRLWDVDTGVELLLQEGHS 411
G L Q H D + +A+ + K T S D K W+ D ++ L EGH
Sbjct: 6 GILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTL-EGHQ 64
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V + GS+AAS LDA R+WDL TG+ I +++ ++FSP+ LATG
Sbjct: 65 LGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATG 124
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
I+ + K Y + I + + P +G +L +G+ D + ++ KL+
Sbjct: 125 SHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLL 183
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+L GH + SL PD Q + T S D +IK++ ++
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Score = 195 (73.7 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 282 ESGDDRPLSGCS--YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV 339
+S D P+ S +S D LAT S G V I+ + +K +L + + +SP
Sbjct: 100 KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPD 159
Query: 340 SNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++A+ + D +++ G LL+T +GH + + F P + L T S D +++DV
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
GH V +AF PD + S D +VWD T + H V G
Sbjct: 220 QHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWG 279
Query: 459 ISFSPNGYHLATGGEDNTCRIWD 481
+ ++ +G + + G+D I+D
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHIYD 302
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ SG + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 303 (111.7 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 75/279 (26%), Positives = 134/279 (48%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
G + + + T SL +VK+W RL +L+GH V S A+SS
Sbjct: 25 GTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 84
Query: 349 DRTARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D RLW+ + G + + G +D +AF P +YL T + ++ V++G +
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ + + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
L T +D +I+D++ + H++ + V F P + +F V+ S D +VKVW
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVG 262
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V + H+ +V + + + I +V D+ I ++
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 243 (90.6 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 60/264 (22%), Positives = 118/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + + E L L + G + SH + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S ++AT + ++ + G + + +A+ P
Sbjct: 99 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + ++
Sbjct: 279 GVKYNGN-GSKIVSVGDDQEIHIY 301
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 60/238 (25%), Positives = 112/238 (47%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V T S D ++W L+ + +GH + + + ++S D RLW
Sbjct: 32 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++ G ++ + + +AF PD A+ ++ + +G+ +L+ K +
Sbjct: 92 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
D +K++ + L +LSGH + V ++ PD+ + S D+ +K+W + H
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 268
Score = 229 (85.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 62/221 (28%), Positives = 101/221 (45%)
Query: 356 NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTT----SFD---KTWRLWDVDTGVELLLQE 408
N G L Q H D + +A+ + K T S D K W+ D ++ L E
Sbjct: 3 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL-E 61
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH V + +AAS LDA R+WDL G+ I +++ ++FSP+ +L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
ATG I+ + K Y + I + + P +G +L +G+ D + ++
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATG 180
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
KL+ +L GH + SL PD Q + T S D +IK++ ++
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Score = 198 (74.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/190 (26%), Positives = 88/190 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT + G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH+
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ T + H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
G+D I+D
Sbjct: 293 GDDQEIHIYD 302
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 323 (118.8 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 79/275 (28%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 391 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 448
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 449 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 506
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 507 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 562
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 563 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 619
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW +
Sbjct: 620 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 652
Score = 272 (100.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 423 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 478
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 479 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 536
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 537 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 591
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 592 NILVSGNADSTVKIWDIK 609
Score = 260 (96.6 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 65/240 (27%), Positives = 115/240 (47%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 432 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 489
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 490 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 548 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 603
Query: 478 RIWDLRKRKSLYVIPA---HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + H + ++ ++F F++T S D TVK+W + + +++L
Sbjct: 604 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLKTGEFIRNL 660
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 377 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 435
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 436 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 491
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 492 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 548
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 549 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 577
Score = 169 (64.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 509 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 566
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 567 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 624
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDL+TG R+++ LE
Sbjct: 625 SAVTCLQFNKNFVITSSD--DGTVKLWDLKTGEFIRNLVTLE 664
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 323 (118.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 79/275 (28%), Positives = 134/275 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN + + S +K+WS + L GHT N + + S DRT ++WN
Sbjct: 396 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 453
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ G ++T GH + M H K + + S D T R+WD++TG L + GH +V
Sbjct: 454 ETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 511
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ + DG S D + +VWD T + L+GH V + F +G H+ +G D +
Sbjct: 512 VQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 567
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD+ ++ + H +L S ++ + LV+G+ D TVK+W + + +++L G
Sbjct: 568 IRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQG 624
Query: 537 ---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ VT L + + + T S D +KLW +
Sbjct: 625 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 657
Score = 272 (100.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 313 WSMPRLQKFSALKGHTERA-TDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
W L+ LKGH + T + F N + + S D T ++W+ G L T GH
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + G+T D+T ++W+ +TG + GH+ +V + H ++ S
Sbjct: 428 GVWSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-- 483
Query: 431 LDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV 490
DA RVWD+ TG+ + L GHV V + + +G + +G D ++WD L+
Sbjct: 484 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 541
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H+N + ++F+ G +V+GS D +++VW + +L+GH++ + +++ +
Sbjct: 542 LQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 596
Query: 551 QSIATVSHDRWIKLWSTR 568
+ + + D +K+W +
Sbjct: 597 NILVSGNADSTVKIWDIK 614
Score = 260 (96.6 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 65/240 (27%), Positives = 115/240 (47%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
N++ + S +K+W+ + L GHT + V + S D T R+W+ +
Sbjct: 437 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 494
Query: 359 -GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L+ GH+ + + + G+ + + ++D ++WD +T L +GH+ VY +
Sbjct: 495 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
F DG S LD RVWD+ TG I L GH G+ N L +G D+T
Sbjct: 553 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTV 608
Query: 478 RIWDLRKRKSLYVIPA---HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+IWD++ + L + H + ++ ++F F++T S D TVK+W + + +++L
Sbjct: 609 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDDGTVKLWDLKTGEFIRNL 665
Score = 197 (74.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + G + + S D T ++W TG L GH+ V+ + +
Sbjct: 382 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 440
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
+ S D +VW+ TG I L GH V + + +G D T R+WD+
Sbjct: 441 SGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 496
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
+ L+V+ H ++ V+ +G +V+G+YD VKVW + +L GH +V SL
Sbjct: 497 QCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 553
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W H +
Sbjct: 554 F--DGIHVVSGSLDTSIRVWDVETGNCIHTL 582
Score = 169 (64.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG + + + +VK+W L+GHT R + F + HV + S D + R+W
Sbjct: 514 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVW 571
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ ++T GH + M + L + + D T ++WD+ TG L +G H
Sbjct: 572 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 629
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + + +S D ++WDL+TG R+++ LE
Sbjct: 630 SAVTCLQFNKNFVITSSD--DGTVKLWDLKTGEFIRNLVTLE 669
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 302 (111.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 74/281 (26%), Positives = 135/281 (48%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+ +D L ++S G + +W K A+ + ++P ++VA D
Sbjct: 63 WGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCS 122
Query: 354 LWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++N +G++ GH L+ F + + T+S D + LWD++TG+++
Sbjct: 123 IYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIV-TSSGDMSCGLWDIETGLQVTSFL 181
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ V ++ P S DA A++WD+R G GH + ++F PNG
Sbjct: 182 GHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAF 241
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSG 525
ATG +D TCR++D+R + L + +H N+I + V F + G L+ G D VW
Sbjct: 242 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDT 299
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ L+GH+ +V+ L + + ++AT S D ++++W+
Sbjct: 300 MKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340
Score = 258 (95.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 66/241 (27%), Positives = 116/241 (48%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ G+ +A L + I+++ + + S L GH + F N + TSS
Sbjct: 103 CAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D + LW+ + L + +F GH + ++ P K + + D + +LWD+ GV
Sbjct: 162 GDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + + F P+G A+ DA R++D+R + LA+ H + GI+ FS
Sbjct: 222 FPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE-LAMYSHDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C +WD K + ++ H N +S + + G + TGS+D ++VW
Sbjct: 281 SGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVT-ENGMAVATGSWDSFLRVW 339
Query: 524 S 524
+
Sbjct: 340 N 340
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 59/198 (29%), Positives = 93/198 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + + ++ GHT ++ +P + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G+ T S D T RL+D+ EL +
Sbjct: 205 DASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSP 463
H + GI AF G L + D VWD ++ RS + L GH V + +
Sbjct: 265 S-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGI-LAGHDNRVSCLGVTE 322
Query: 464 NGYHLATGGEDNTCRIWD 481
NG +ATG D+ R+W+
Sbjct: 323 NGMAVATGSWDSFLRVWN 340
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 55/231 (23%), Positives = 102/231 (44%)
Query: 303 TSSLSGVVKIWSMPRLQKFS--ALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS 360
TS L + + R+Q + L+GH + + + S ++ ++S D +W++ +
Sbjct: 28 TSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTT 87
Query: 361 -LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT--GVELLLQE--GHSRSVY 415
++ + A+ PSG Y+ D ++++ T G + +E GH +
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLS 147
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
F D + S G D +WD+ TG + + GH V+ +S +P +G D
Sbjct: 148 CCRFLDDNQIVTSSG-DMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDA 206
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ ++WD+R+ P H + I+ V F P G TGS D T +++ R
Sbjct: 207 SAKLWDIREGVCKQTFPGHESDINAVTFFPN-GQAFATGSDDATCRLFDIR 256
Score = 181 (68.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 55/209 (26%), Positives = 95/209 (45%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
S A GLD + +++L+T G R L GH + F + + T D +C +
Sbjct: 110 SYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDN-QIVTSSGDMSCGL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + H+ + + PQ F V+G+ D + K+W R+ ++ GHE+
Sbjct: 169 WDIETGLQVTSFLGHTGDVMALSLAPQCKTF-VSGACDASAKLWDIREGVCKQTFPGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ P+ Q+ AT S D +L+ R
Sbjct: 228 DINAVTFFPNGQAFATGSDDATCRLFDIR 256
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 302 (111.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 71/239 (29%), Positives = 117/239 (48%)
Query: 336 FSPVSNHVATSSADRTARLWNT---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFD 390
++P N VA D +++ +G++ GH L+ F + + T+S D
Sbjct: 5 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGD 63
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE 450
T LWD++TG + + GHS V ++ PDG S DA ++WD+R
Sbjct: 64 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 123
Query: 451 GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQE 507
GH + ++F PNGY TG +D TCR++DLR + L + +H N+I + V F +
Sbjct: 124 GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SHDNIICGITSVAFS-RS 181
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
G L+ G D +W L+GH+ +V+ L + D ++AT S D ++K+W+
Sbjct: 182 GRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 71/241 (29%), Positives = 114/241 (47%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+S+ + + S L GHT + F N + TSS
Sbjct: 3 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSS 61
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G F GH + ++ P G+ + + D + +LWDV +
Sbjct: 62 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 121
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + +AF P+G + DA R++DLR + +L + H + GI+ FS
Sbjct: 122 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDNIICGITSVAFSR 180
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G L G +D C IWD K V+ H N +S + +G + TGS+D +K+W
Sbjct: 181 SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT-DDGMAVATGSWDSFLKIW 239
Query: 524 S 524
+
Sbjct: 240 N 240
Score = 164 (62.8 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 418 AFHPDGSLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGE 473
A+ P G+ A GLD + ++ L+T G R L GH + F + + + G
Sbjct: 4 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG- 62
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
D TC +WD+ + HS + + P +G V+G+ D ++K+W RD ++
Sbjct: 63 DTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQT 121
Query: 534 LSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
GHE+ + ++ P+ + T S D +L+ R
Sbjct: 122 FIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLR 156
Score = 143 (55.4 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRK-SLYV---IPAHSNLISQVKFEPQEGYFLVTGS 515
+++P+G +A GG DN C I+ L+ R+ ++ V +P H+ +S +F ++T S
Sbjct: 4 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ--IITSS 61
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
D T +W + +GH V SL + PD ++ + + D IKLW R+
Sbjct: 62 GDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 115
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 40/160 (25%), Positives = 61/160 (38%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SGD LS + DG + + +K+W + GH V F P
Sbjct: 84 SGDVMSLS---LAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 140
Query: 343 VATSSADRTARLWN--TDGSLLN-TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
T S D T RL++ D LL + + + +AF SG+ L D +WD
Sbjct: 141 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 200
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
G + GH V + DG A+ D+ ++W+
Sbjct: 201 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 77/225 (34%), Positives = 112/225 (49%)
Query: 260 ESIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQ 319
E DDE D +++ L C R L+ S G L + +S ++ W +
Sbjct: 318 EEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSS----GLLSCSEDMS--IRYWDLGSFT 371
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFH 378
+GH D+ SP S + A++S DRTARLW+ D + L + GHL + + FH
Sbjct: 372 NTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 431
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P+ YL T S DKT RLW G + L GH V +AF P+G AS G D ++W
Sbjct: 432 PNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 491
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
DL +G L GH + ++FSP+ +A+ DN+ R+WD+R
Sbjct: 492 DLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
Score = 301 (111.0 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 66/209 (31%), Positives = 101/209 (48%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT--FQGHLDRLARMAF 377
+ L+GH F S+ + + S D + R W+ GS NT +QGH + +
Sbjct: 330 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDLDI 388
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
P Y + S D+T RLW D L + GH V + FHP+ + A+ D R+
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
W + G S+ GH PVL ++FSPNG +LA+ GED ++WDL + H++
Sbjct: 449 WSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 508
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
I+ + F P + + S D +V+VW R
Sbjct: 509 ITSLTFSPDSS-LVASASMDNSVRVWDIR 536
Score = 272 (100.8 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 54/159 (33%), Positives = 83/159 (52%)
Query: 302 ATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GS 360
A++S ++WS R GH V F P SN++AT S D+T RLW+T G+
Sbjct: 396 ASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
+ F GH + +AF P+GKYL + D+ +LWD+ +G GH+ ++ + F
Sbjct: 456 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 515
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
PD SL AS +D RVWD+R+ +G ++G+
Sbjct: 516 PDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGV 554
Score = 268 (99.4 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 70/240 (29%), Positives = 111/240 (46%)
Query: 327 HTERATDVT-FSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLG 385
+TE+ + SP S +A + +LW+ L + +D ++R+ H + +L
Sbjct: 262 NTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVD-VSRI--HLACDFLE 318
Query: 386 TTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRS 445
D+ D + G E+ + GH VY F D S SC D R WDL + +
Sbjct: 319 EED-DE-----DDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTN 372
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP 505
+ +GH PV + SP+ + A+ D T R+W + L + H + VKF P
Sbjct: 373 TVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHP 432
Query: 506 QEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
Y L TGS D TV++WS + V+ +GH V SL P+ + +A+ D+ +KLW
Sbjct: 433 NSNY-LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 491
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D G + L GH PV F + L + ED + R WDL + + H+ +
Sbjct: 324 DDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 383
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
+ P YF + S+D T ++WS R + L + +GH A V + HP+ +AT S
Sbjct: 384 WDLDISPHSLYF-ASASHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHPNSNYLATGS 441
Query: 558 HDRWIKLWSTR 568
D+ ++LWST+
Sbjct: 442 TDKTVRLWSTQ 452
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ ++S +G LA++ +K+W + + L+GHT+ T +TFSP S+
Sbjct: 461 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL 520
Query: 343 VATSSADRTARLWNTDGSLLNT 364
VA++S D + R+W+ S +T
Sbjct: 521 VASASMDNSVRVWDIRSSHCST 542
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 321 (118.1 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 80/256 (31%), Positives = 119/256 (46%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT V + + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G+++ + S D +LWD+ + GHS++V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F PN Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYD-MTVKVWSG-RDFKLVKSL 534
R WDL K + + I + V F P +G L +G D + V W R F +V
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DGCCLYSGCQDSLRVYGWEPERCFDVVLVS 271
Query: 535 SGHEAKVTSLDIHPDE 550
G KV L + D+
Sbjct: 272 WG---KVADLAVCNDQ 284
Score = 258 (95.9 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D LW ++ ++ GH+ V + + L + RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +A+G +D ++WD+R++ ++ HS +
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G +L + + D TVK+W K++ GH V ++ HP+E +A+ S D
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 560 RWIKLW 565
R I+ W
Sbjct: 211 RTIRFW 216
Score = 255 (94.8 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 58/211 (27%), Positives = 98/211 (46%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ + L+ S SG +++W + + L GH + F P
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++GH + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GH+ V + FHP+ L AS D R WDL + + +EG PV +
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
F+P+G L +G +D+ R++ + V+
Sbjct: 239 FNPDGCCLYSGCQDSL-RVYGWEPERCFDVV 268
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 46/136 (33%), Positives = 73/136 (53%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG +G LATGG+D +W + K + + H++
Sbjct: 11 WKLQ---EIVAHASNVSSLVLG---KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 497 LISQVKFE-PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT 555
+ V+ P+E +V GS +++VW K++++L GH+A + SLD HP + +A+
Sbjct: 65 PVESVRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 556 VSHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 123 GSQDTNIKLWDIRRKG 138
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 321 (118.1 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 76/254 (29%), Positives = 119/254 (46%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT V + + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G+++ + S D +LWD+ + GHS++V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F PN Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R WDL K + + I + V F P +G L +G D +++V+ + +
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DGCCLYSGCQD-SLRVYGWEPERCFDVVLV 270
Query: 537 HEAKVTSLDIHPDE 550
+ KV L I D+
Sbjct: 271 NWGKVADLAICNDQ 284
Score = 258 (95.9 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D LW ++ ++ GH+ V + + L + RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +A+G +D ++WD+R++ ++ HS +
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G +L + + D TVK+W K++ GH V ++ HP+E +A+ S D
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 560 RWIKLW 565
R I+ W
Sbjct: 211 RTIRFW 216
Score = 255 (94.8 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 58/211 (27%), Positives = 98/211 (46%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ + L+ S SG +++W + + L GH + F P
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++GH + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GH+ V + FHP+ L AS D R WDL + + +EG PV +
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
F+P+G L +G +D+ R++ + V+
Sbjct: 239 FNPDGCCLYSGCQDSL-RVYGWEPERCFDVV 268
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 46/136 (33%), Positives = 73/136 (53%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG +G LATGG+D +W + K + + H++
Sbjct: 11 WKLQ---EIVAHASNVSSLVLG---KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 497 LISQVKFE-PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT 555
+ V+ P+E +V GS +++VW K++++L GH+A + SLD HP + +A+
Sbjct: 65 PVESVRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 556 VSHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 123 GSQDTNIKLWDIRRKG 138
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 321 (118.1 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 76/254 (29%), Positives = 119/254 (46%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT V + + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G+++ + S D +LWD+ + GHS++V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F PN Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R WDL K + + I + V F P +G L +G D +++V+ + +
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DGCCLYSGCQD-SLRVYGWEPERCFDVVLV 270
Query: 537 HEAKVTSLDIHPDE 550
+ KV L I D+
Sbjct: 271 NWGKVADLAICNDQ 284
Score = 258 (95.9 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D LW ++ ++ GH+ V + + L + RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +A+G +D ++WD+R++ ++ HS +
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G +L + + D TVK+W K++ GH V ++ HP+E +A+ S D
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 560 RWIKLW 565
R I+ W
Sbjct: 211 RTIRFW 216
Score = 255 (94.8 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 58/211 (27%), Positives = 98/211 (46%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ + L+ S SG +++W + + L GH + F P
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++GH + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GH+ V + FHP+ L AS D R WDL + + +EG PV +
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
F+P+G L +G +D+ R++ + V+
Sbjct: 239 FNPDGCCLYSGCQDSL-RVYGWEPERCFDVV 268
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 46/136 (33%), Positives = 73/136 (53%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG +G LATGG+D +W + K + + H++
Sbjct: 11 WKLQ---EIVAHASNVSSLVLG---KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 497 LISQVKFE-PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT 555
+ V+ P+E +V GS +++VW K++++L GH+A + SLD HP + +A+
Sbjct: 65 PVESVRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 556 VSHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 123 GSQDTNIKLWDIRRKG 138
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 321 (118.1 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 76/254 (29%), Positives = 119/254 (46%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT V + + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G+++ + S D +LWD+ + GHS++V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F PN Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R WDL K + + I + V F P +G L +G D +++V+ + +
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DGCCLYSGCQD-SLRVYGWEPERCFDVVLV 270
Query: 537 HEAKVTSLDIHPDE 550
+ KV L I D+
Sbjct: 271 NWGKVADLAICNDQ 284
Score = 258 (95.9 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D LW ++ ++ GH+ V + + L + RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +A+G +D ++WD+R++ ++ HS +
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G +L + + D TVK+W K++ GH V ++ HP+E +A+ S D
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 560 RWIKLW 565
R I+ W
Sbjct: 211 RTIRFW 216
Score = 255 (94.8 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 58/211 (27%), Positives = 98/211 (46%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ + L+ S SG +++W + + L GH + F P
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++GH + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GH+ V + FHP+ L AS D R WDL + + +EG PV +
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
F+P+G L +G +D+ R++ + V+
Sbjct: 239 FNPDGCCLYSGCQDSL-RVYGWEPERCFDVV 268
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 46/136 (33%), Positives = 73/136 (53%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG +G LATGG+D +W + K + + H++
Sbjct: 11 WKLQ---EIVAHASNVSSLVLG---KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 497 LISQVKFE-PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT 555
+ V+ P+E +V GS +++VW K++++L GH+A + SLD HP + +A+
Sbjct: 65 PVESVRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 556 VSHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 123 GSQDTNIKLWDIRRKG 138
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 301 (111.0 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 74/279 (26%), Positives = 133/279 (47%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
G + + + + SL +VK+W +L L+GH V S + A+SS
Sbjct: 25 GKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSL 84
Query: 349 DRTARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D RLW+ + G + + G +D + +AF P ++L T S ++ V+TG +
Sbjct: 85 DAHIRLWDLETGKQIKSIDAGPVDAWS-LAFSPDSQFLATGSHVGKVNIFGVETGKKEYS 143
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ + + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
L T +D +I+D++ + H + + V F P + +F V+ S D +VKVW
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHF-VSSSSDKSVKVWDAG 262
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V + H+ +V + + I +V D+ I ++
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 265 (98.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 63/238 (26%), Positives = 115/238 (48%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V + S D ++W + L+ T +GH + + +G ++S D RLW
Sbjct: 32 SETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++TG ++ + + +AF PD A+ ++ + TG+ +L+ K +
Sbjct: 92 DLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
D +K++ + L +LSGH + V ++ PD+ + S D+ +K+W + H
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVH 268
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 63/264 (23%), Positives = 117/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + E L L T G + SH G++ A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S +AT S ++ + G + + +A+ P
Sbjct: 99 IKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD R ++ H + +
Sbjct: 219 VQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + ++
Sbjct: 279 GVKYNGS-GSKIVSVGDDQEIHIY 301
Score = 247 (92.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 64/218 (29%), Positives = 102/218 (46%)
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTT----SFD---KTWRLWDVDTGVELLLQEGHS 411
G L Q H D + +A+ + K T S D K W+ D ++ L EGH
Sbjct: 6 GILFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTL-EGHQ 64
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V + GS+AAS LDA R+WDL TG+ I +++ ++FSP+ LATG
Sbjct: 65 LGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATG 124
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
I+ + K Y + I + + P +G +L +G+ D + ++ KL+
Sbjct: 125 SHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLL 183
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+L GH + SL PD Q + T S D +IK++ ++
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Score = 195 (73.7 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 282 ESGDDRPLSGCS--YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV 339
+S D P+ S +S D LAT S G V I+ + +K +L + + +SP
Sbjct: 100 KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPD 159
Query: 340 SNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++A+ + D +++ G LL+T +GH + + F P + L T S D +++DV
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
GH V +AF PD + S D +VWD T + H V G
Sbjct: 220 QHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWG 279
Query: 459 ISFSPNGYHLATGGEDNTCRIWD 481
+ ++ +G + + G+D I+D
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHIYD 302
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ SG + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 301 (111.0 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 78/261 (29%), Positives = 119/261 (45%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D LL ++S G + IW K A+ + ++P N+VA D ++N
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 357 T---DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+G++ GH L+ F + + T+S D T LWD++TG + GH+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V ++ PD S DA A++WD+R G GH + I F PNG ATG
Sbjct: 185 GDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG 244
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLI---SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
+D TCR++DLR + L V +H N+I + V F + G L+ G D VW
Sbjct: 245 SDDATCRLFDLRADQELMVY-SHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDTLKA 302
Query: 529 KLVKSLSGHEAKVTSLDIHPD 549
L+GH+ +V+ L + D
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDD 323
Score = 248 (92.4 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 63/216 (29%), Positives = 101/216 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQ---KFSA-LKGHTERATDVTFSPVSNHVATSS 347
C+Y+ GN +A L + I+++ + + S L GHT + F N + TSS
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSS 161
Query: 348 ADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D T LW+ + G TF GH + ++ P + + + D + +LWDV G+
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQT 221
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS---FSP 463
GH + I F P+G+ A+ DA R++DLR + ++ H + GI+ FS
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSK 280
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
+G L G +D C +WD K V+ H N +S
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVS 316
Score = 191 (72.3 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GHL ++ M + + L + S D +WD T ++ S V A+ P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 424 SLAASCGLDALARVWDLRT--G--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+ A GLD + +++L+T G R L GH + F + + T D TC +
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCAL 168
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
WD+ + H+ + + P F V+G+ D + K+W R+ ++ +GHE+
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDARCF-VSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+ ++ P+ + AT S D +L+ R D+ M
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLR--ADQELM 262
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/179 (30%), Positives = 84/179 (46%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + D N + TSS +W + Q+ + GHT ++ +P + + +
Sbjct: 146 LSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGAC 204
Query: 349 DRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D +A+LW+ +G TF GH + + F P+G T S D T RL+D+ EL++
Sbjct: 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVY 264
Query: 408 EGHSRSVYGI---AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPV--LGIS 460
H + GI AF G L + D VWD L+ R+ + L GH V LG++
Sbjct: 265 S-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGV-LAGHDNRVSCLGVT 321
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 301 (111.0 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 76/274 (27%), Positives = 130/274 (47%)
Query: 299 NLLATSSLSGVVKIWSMPR---LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+ L T L +VK+W + L+ LKGH V S +A+SS D T LW
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 356 NT---DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHS 411
+ D L +F G +D L + F P KY+ + D ++ V+TG E L +
Sbjct: 113 DARSGDKKHLLSF-GPVD-LWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNG 170
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
+ IA+ PDG AS +D + ++D+ G+ + LEGH PV + FSPN L T
Sbjct: 171 KYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTA 230
Query: 472 GEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
+D +++D+ + + H++ + V F ++G + S D +VK+W + K +
Sbjct: 231 SDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFS-EDGKHFASSSSDNSVKIWDTSERKCL 289
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ + H +V + P +A+ S D+ + ++
Sbjct: 290 HTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 248 (92.4 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 67/266 (25%), Positives = 124/266 (46%)
Query: 262 IDDEID-YALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
+DD + + L++ +L L G + + S DG +A+SSL + +W K
Sbjct: 60 LDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDK 119
Query: 321 FSALK-GHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLA-RMAF 377
L G + T V FSP + +V + D +++ + G T + +A+
Sbjct: 120 KHLLSFGPVDLWT-VQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAY 178
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
P GKY+ + + D ++DV G + EGH+ V + F P+ L + D ++
Sbjct: 179 SPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKL 238
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
+D+ + L GH VL ++FS +G H A+ DN+ +IWD +RK L+ H++
Sbjct: 239 YDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQ 298
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVW 523
+ V++ P + + S D ++ ++
Sbjct: 299 VWGVRYSPGNDK-VASASEDKSLNIY 323
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 59/234 (25%), Positives = 110/234 (47%)
Query: 343 VATSSADRTARLWNT--DGSLL--NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
+ T D ++W+ D +L + +GH + +A G+ + ++S D T LWD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL-DALARVWDLRTGRSILALEG-HVKPV 456
+G + L ++ + F P S GL D ++ + TG++ L+ + K
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQFSPCNKYVIS-GLNDGKISMYSVETGKAEQTLDAQNGKYT 173
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G ++A+G D I+D+ K + + H+ + + F P L+T S
Sbjct: 174 LSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNS-QLLLTASD 232
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
D +K++ +V +LSGH + V + D + A+ S D +K+W T +
Sbjct: 233 DGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSER 286
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 317 (116.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 71/257 (27%), Positives = 116/257 (45%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 189 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 247
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ + YL + DK + WD++ + GH +VYG+ HP + +C
Sbjct: 248 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 307
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
D+ AR+WD+RT S+ L GH V + + TG D T R+WDL K+ +
Sbjct: 308 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 367
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H + V P+ Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 368 TNHKKSVRAVVLHPRH-YTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV 425
Query: 552 SIATVSHDRWIKLWSTR 568
++ + + LW R
Sbjct: 426 LVSGADNGT-MHLWDWR 441
Score = 231 (86.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 71/297 (23%), Positives = 125/297 (42%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T S +KIW + + +L GH V S S ++ + D+
Sbjct: 208 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDK 267
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T S D T R+WDV T + G
Sbjct: 268 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSG 327
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D R+WDL G++ + L H K V + P Y A
Sbjct: 328 HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFA 387
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+G DN + W + + H+ +I+ + +G LV+G+ + T+ +W +G
Sbjct: 388 SGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVN-SDGV-LVSGADNGTMHLWDWRTGY 444
Query: 527 DFKLVKSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDV 578
+F+ V + G E+ + + E + T D+ IK++ + E V
Sbjct: 445 NFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYKEDDTATEETHPV 501
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 259 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 317
Query: 569 NKGDEHAM 576
K H +
Sbjct: 318 TKASVHTL 325
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 317 (116.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 71/257 (27%), Positives = 116/257 (45%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 190 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 248
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ + YL + DK + WD++ + GH +VYG+ HP + +C
Sbjct: 249 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 308
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
D+ AR+WD+RT S+ L GH V + + TG D T R+WDL K+ +
Sbjct: 309 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 368
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H + V P+ Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 369 TNHKKSVRAVVLHPRH-YTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV 426
Query: 552 SIATVSHDRWIKLWSTR 568
++ + + LW R
Sbjct: 427 LVSGADNGT-MHLWDWR 442
Score = 230 (86.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 71/297 (23%), Positives = 125/297 (42%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T S +KIW + + +L GH V S S ++ + D+
Sbjct: 209 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDK 268
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T S D T R+WDV T + G
Sbjct: 269 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSG 328
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D R+WDL G++ + L H K V + P Y A
Sbjct: 329 HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFA 388
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+G DN + W + + H+ +I+ + +G LV+G+ + T+ +W +G
Sbjct: 389 SGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVN-SDGV-LVSGADNGTMHLWDWRTGY 445
Query: 527 DFKLVKSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDV 578
+F+ V + G E+ + + E + T D+ IK++ + E V
Sbjct: 446 NFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYREDDTATEETHPV 502
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 260 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 569 NKGDEHAM 576
K H +
Sbjct: 319 TKASVHTL 326
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 317 (116.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 71/257 (27%), Positives = 116/257 (45%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 191 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 249
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ + YL + DK + WD++ + GH +VYG+ HP + +C
Sbjct: 250 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 309
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
D+ AR+WD+RT S+ L GH V + + TG D T R+WDL K+ +
Sbjct: 310 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 369
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H + V P+ Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 370 TNHKKSVRAVVLHPRH-YTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV 427
Query: 552 SIATVSHDRWIKLWSTR 568
++ + + LW R
Sbjct: 428 LVSGADNGT-MHLWDWR 443
Score = 231 (86.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 71/297 (23%), Positives = 125/297 (42%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T S +KIW + + +L GH V S S ++ + D+
Sbjct: 210 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDK 269
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T S D T R+WDV T + G
Sbjct: 270 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSG 329
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D R+WDL G++ + L H K V + P Y A
Sbjct: 330 HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFA 389
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+G DN + W + + H+ +I+ + +G LV+G+ + T+ +W +G
Sbjct: 390 SGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVN-SDGV-LVSGADNGTMHLWDWRTGY 446
Query: 527 DFKLVKSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDV 578
+F+ V + G E+ + + E + T D+ IK++ + E V
Sbjct: 447 NFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYKEDDTATEETHPV 503
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 261 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 319
Query: 569 NKGDEHAM 576
K H +
Sbjct: 320 TKASVHTL 327
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 317 (116.6 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 71/257 (27%), Positives = 116/257 (45%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 192 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 250
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ + YL + DK + WD++ + GH +VYG+ HP + +C
Sbjct: 251 VRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 310
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
D+ AR+WD+RT S+ L GH V + + TG D T R+WDL K+ +
Sbjct: 311 DSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTL 370
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H + V P+ Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 371 TNHKKSVRAVILHPRH-YTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLTVNSDGV 428
Query: 552 SIATVSHDRWIKLWSTR 568
++ + + LW R
Sbjct: 429 LVSGADNGT-MHLWDWR 444
Score = 231 (86.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 70/292 (23%), Positives = 124/292 (42%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T S +KIW + + +L GH V S S ++ + D+
Sbjct: 211 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDK 270
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T S D T R+WDV T + G
Sbjct: 271 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSG 330
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D R+WDL G++ + L H K V + P Y A
Sbjct: 331 HTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFA 390
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+G DN + W + + H+ +I+ + +G LV+G+ + T+ +W +G
Sbjct: 391 SGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLTVN-SDGV-LVSGADNGTMHLWDWRTGY 447
Query: 527 DFKLVKSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
+F+ V + G E+ + + E + T D+ IK++ + E
Sbjct: 448 NFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTIKVYKEDDTATE 499
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 262 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 320
Query: 569 NKGDEHAM 576
K H +
Sbjct: 321 TKASVHTL 328
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 300 (110.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 61/219 (27%), Positives = 118/219 (53%)
Query: 280 CTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV 339
CT G ++ ++ S S + +ATSS G +KIWS + L GH + V ++
Sbjct: 48 CTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATG 107
Query: 340 SNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
S ++A++S D+T R+W+ + + +GH + ++ + F+P G L + S+D+T R+W++
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK-PVL 457
G L + HS + ++ DG+L A+ D +AR+WD+ +G+ + L + P+
Sbjct: 168 QDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLS 227
Query: 458 GISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
+ F+ N +L ++ R+WD R+ + + + +H N
Sbjct: 228 NLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVN 266
Score = 296 (109.3 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 66/220 (30%), Positives = 113/220 (51%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFH 378
++ L GH + T V+ SP +ATSS+D T ++W+ L T GH ++++ +
Sbjct: 46 EYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWA 105
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
KYL + S DKT R+WD + + +GH+ V I F+P G+L S D R+W
Sbjct: 106 TGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL- 497
+L+ G + L H +P++ +S S +G AT D RIWD+ + L + N+
Sbjct: 166 NLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVP 225
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
+S ++F Y LV+ + + +++W R ++V+ H
Sbjct: 226 LSNLQFTENRKYLLVS-NLNSQIRLWDYRRNRVVRIFDSH 264
Score = 247 (92.0 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH +SV ++ P+ A+ D ++W T R L GH + + + ++ +L
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
A+ +D T RIWD KR S+ + H+N +S + F P G LV+GS+D TV++W+ +D
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL-GTLLVSGSWDETVRIWNLQDG 170
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
++ L H + S+ I D AT S+D ++W
Sbjct: 171 TCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Score = 209 (78.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L+CT G R +S ++ LA++S ++IW + LKGHT + + F+
Sbjct: 88 LECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFN 147
Query: 338 PVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P+ + + S D T R+WN DG+ L H + + ++ G T S+D R+W
Sbjct: 148 PLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Query: 397 DVDTGVEL-LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKP 455
DV +G L L E + + + F + L++ R+WD R R + + HV
Sbjct: 208 DVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNT 267
Query: 456 VLGISF 461
+S+
Sbjct: 268 RYSMSW 273
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 436 RVWDLRTGRS-ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
R ++ +G S L GH K V +S SPN +AT D T +IW + + H
Sbjct: 36 RNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGH 95
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
ISQVK+ Y L + S D T+++W V+ L GH V+S+D +P +
Sbjct: 96 YRGISQVKWATGSKY-LASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLV 154
Query: 555 TVSHDRWIKLWSTRN 569
+ S D +++W+ ++
Sbjct: 155 SGSWDETVRIWNLQD 169
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 57/244 (23%), Positives = 94/244 (38%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G +S ++ G LL + S V+IW++ L H+E V+ S
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLC 195
Query: 344 ATSSADRTARLWNT-DGSLLNTFQGHLD-RLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
AT+S D AR+W+ G L T ++ L+ + F + KYL ++ + RLWD
Sbjct: 196 ATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRN 255
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
+ + + H + Y +++ S +AL P SF
Sbjct: 256 RVVRIFDSHVNTRYSMSWDCYSSKNIPKNTEALPN-------------NDSSYPDDAESF 302
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTGSYDMTV 520
+ Y L ED T +I D + + HS+ G F++T D V
Sbjct: 303 MHDAY-LLIPSEDGTIQITDPSTKIIIDDSIRHSDDPETSLLNVTSLGPFIITSGTDPYV 361
Query: 521 KVWS 524
+VW+
Sbjct: 362 RVWA 365
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 300 (110.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 75/280 (26%), Positives = 135/280 (48%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSMPRLQKFS---ALKGHTERATDVTFSPVSNHVATSS 347
G + + + T SL +VK+W R +K +L+GH V S A+SS
Sbjct: 25 GSNKKENSETVVTGSLDDLVKVWKW-RDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSS 83
Query: 348 ADRTARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
D RLW+ + G + + G +D +AF P +YL T + ++ V++G +
Sbjct: 84 LDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEY 142
Query: 406 LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
+ + + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 466 YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
L T +D +I+D++ + H++ + V F P + +F V+ S D +VKVW
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDV 261
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V + H+ +V + + + I +V D+ I ++
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 244 (91.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 60/264 (22%), Positives = 118/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + + E L L + G + SH + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S ++AT + ++ + G + + +A+ P
Sbjct: 99 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + ++
Sbjct: 279 GVKYNGN-GSKIVSVGDDQEIHIY 301
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 60/238 (25%), Positives = 112/238 (47%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V T S D ++W L+ + +GH + + + ++S D RLW
Sbjct: 32 SETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++ G ++ + + +AF PD A+ ++ + +G+ +L+ K +
Sbjct: 92 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
D +K++ + L +LSGH + V ++ PD+ + S D+ +K+W + H
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 268
Score = 198 (74.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/190 (26%), Positives = 88/190 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT + G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH+
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ T + H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
G+D I+D
Sbjct: 293 GDDQEIHIYD 302
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 300 (110.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 75/270 (27%), Positives = 133/270 (49%)
Query: 301 LATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
+ T SL +VK+W RL+ +L+GH V S A+SS D RLW+ +
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 359 -GSLLNTFQ-GHLDRLARMAFHPSGKYLGT-TSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
G + + G +D +AF P +YL T T K ++ V++G + + + +
Sbjct: 95 NGKQMKSIDAGPVDAWT-LAFSPDSQYLATGTHMGKV-NIFGVESGKKEYSLDTRGKFIL 152
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+ L T +D
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 212
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
+I+D++ + H++ + V F P + +F V+ S D +VKVW + +
Sbjct: 213 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTCIHTFF 271
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H+ +V + + + I +V D+ I ++
Sbjct: 272 DHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 246 (91.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 61/264 (23%), Positives = 118/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + + E L L + G + SH + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S ++AT + ++ + G + + +A+ P
Sbjct: 99 MKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + V+
Sbjct: 279 GVKYNGN-GSKIVSVGDDQEIHVY 301
Score = 224 (83.9 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 58/210 (27%), Positives = 99/210 (47%)
Query: 366 QGHLDRLARMAFHPSGKY----LGTTSFDKTWRLWDV-DTGVELLLQ-EGHSRSVYGIAF 419
Q H D + +A+ + K + T S D ++W D +EL EGH V +
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDI 72
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+AAS LDA R+WDL G+ + +++ ++FSP+ +LATG I
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNI 132
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
+ + K Y + I + + P +G +L +G+ D + ++ KL+ +L GH
Sbjct: 133 FGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ SL PD Q + T S D +IK++ ++
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/190 (26%), Positives = 88/190 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT + G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH+
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ T I H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
G+D ++D
Sbjct: 293 GDDQEIHVYD 302
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 318 (117.0 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 81/270 (30%), Positives = 128/270 (47%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER 330
+KV L D ++ D + +S DG LAT + +++W + GH +
Sbjct: 331 EKVCVLQDDNADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQD 390
Query: 331 ATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSF 389
+ F+ +A+ S DRT RLW+ + G+ L F D + +A P KY+ S
Sbjct: 391 IYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSL 449
Query: 390 DKTWRLWDVDTG--VELLL-QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT---- 442
DK+ R+WD+ G VE L +GH SVY +AF P+G + LD ++W+L T
Sbjct: 450 DKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGN 509
Query: 443 --------GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
GR + EGH VL ++ +P+ + +G +D + WD R + ++ H
Sbjct: 510 MQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGH 569
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
N + V P G+F TGS DM ++WS
Sbjct: 570 KNSVISVAPSPTGGFF-ATGSGDMRARIWS 598
Score = 282 (104.3 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 77/252 (30%), Positives = 117/252 (46%)
Query: 334 VTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V FSP ++AT + D+ R+W+ T ++ F GH + + F G+ + + S D+T
Sbjct: 352 VCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRT 411
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEG- 451
RLWD++ G L + V +A PD A+ LD RVWDL G + LEG
Sbjct: 412 VRLWDIENGTALTVFTIED-GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGP 470
Query: 452 --HVKPVLGISFSPNGYHLATGGEDNTCRIWDL------------RKRKSLYVIPAHSNL 497
H V ++FSPNG L TG D T ++W+L + + + H +
Sbjct: 471 DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDF 530
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
+ V P + ++++GS D V+ W R L GH+ V S+ P AT S
Sbjct: 531 VLSVALTP-DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGS 589
Query: 558 HDRWIKLWS-TR 568
D ++WS TR
Sbjct: 590 GDMRARIWSYTR 601
Score = 186 (70.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG--- 458
V+L+ H V + F DG A+ G + A+++D+ TG + L+ G
Sbjct: 290 VDLVHTLQHESVVCCVRFSADGKYVAT-GCNRSAQIFDVNTGEKVCVLQDDNADTTGDLY 348
Query: 459 ---ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
+ FSP+G +LATG ED R+WD+ R H I + F ++G + +GS
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFA-RDGRTIASGS 407
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
D TV++W + + + + VT++ I PD + +A S D+ +++W
Sbjct: 408 GDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVW 456
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 452 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHS-----NL-ISQVKFEP 505
H V + FS +G ++ATG + + +I+D+ + + V+ + +L I V F P
Sbjct: 298 HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 506 QEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+G +L TG+ D ++VW + +GHE + SLD D ++IA+ S DR ++LW
Sbjct: 357 -DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLW 415
Query: 566 STRN 569
N
Sbjct: 416 DIEN 419
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 326 (119.8 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 86/292 (29%), Positives = 139/292 (47%)
Query: 285 DDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVA 344
DD ++ +S GN + + S +K+WS + L GHT S N +
Sbjct: 994 DDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--GNIII 1049
Query: 345 TSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
+ S DRT ++W+ D G+ ++T QGH + M H S G S D T R+WD++ G
Sbjct: 1050 SGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSG--SRDATLRVWDIEQGSC 1107
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
L + GH +V + + DG L S D + ++W + L+GH V + F
Sbjct: 1108 LHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF-- 1163
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+G H+ +G D + R+WD+ + + H +L S ++ LV+G+ D TVKVW
Sbjct: 1164 DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVW 1220
Query: 524 SGRDFKLVKSLSG---HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
+ +++LSG H + VT L + + + T S D +KLW + GD
Sbjct: 1221 DITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKT-GD 1269
Score = 289 (106.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 77/294 (26%), Positives = 144/294 (48%)
Query: 282 ESGDDRPLSGCSYSHDGNLLATSS-------LSGVVKI-WSMPRLQKFSALKGHTERA-T 332
E DRP G DGN+ +S ++++ W ++K LKGH + T
Sbjct: 944 EPRSDRPKRG----RDGNMPPIASPWKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDHVIT 999
Query: 333 DVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
+ FS N + + S D T ++W+ +G L T GH + + SG + + S D+
Sbjct: 1000 CLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV--WSSQMSGNIIISGSTDR 1055
Query: 392 TWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEG 451
T ++WD+D+G + +GH+ +V + H GS S DA RVWD+ G + L G
Sbjct: 1056 TLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLVG 1113
Query: 452 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFL 511
H+ V + + +G + +G D +IW +++ L+ + H+N + ++F+ G +
Sbjct: 1114 HLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD---GLHV 1168
Query: 512 VTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
V+GS D +++VW +L GH++ + +++ + + + + D +K+W
Sbjct: 1169 VSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR--QNILVSGNADSTVKVW 1220
Score = 254 (94.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 67/241 (27%), Positives = 114/241 (47%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
GN++ + S +K+W M L+GHT + + V + S D T R+W+
Sbjct: 1045 GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDI 1102
Query: 358 D-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ GS L+ GHL + + + GK + + ++D ++W + L +GH+ VY
Sbjct: 1103 EQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYS 1160
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F DG S LD RVWD+ TG L GH G+ N L +G D+T
Sbjct: 1161 LQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADST 1216
Query: 477 CRIWDLRKRKSLYVIPA---HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
++WD+ + L + H + ++ ++F + F+VT S D TVK+W + +++
Sbjct: 1217 VKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR---FVVTSSDDGTVKLWDVKTGDFIRN 1273
Query: 534 L 534
L
Sbjct: 1274 L 1274
Score = 221 (82.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 56/211 (26%), Positives = 98/211 (46%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH D + SG + + S D T ++W G L GH+ V+ G++
Sbjct: 991 KGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM--SGNI 1047
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
S D +VWD+ +G + L+GH V + +G + +G D T R+WD+ +
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIEQG 1105
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
L+V+ H + V+++ G +V+G+YD VK+W + + +L GH +V SL
Sbjct: 1106 SCLHVLVGHLAAVRCVQYD---GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQ 1162
Query: 546 IHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
D + + S D I++W +H +
Sbjct: 1163 F--DGLHVVSGSLDTSIRVWDVETGNCKHTL 1191
Score = 172 (65.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 46/162 (28%), Positives = 82/162 (50%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
+DG L+ + + +VKIW R + L+GHT R + F + HV + S D + R+W
Sbjct: 1123 YDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGL--HVVSGSLDTSIRVW 1180
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG---HS 411
+ + G+ +T GH + M + L + + D T ++WD+ TG L G H
Sbjct: 1181 DVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHH 1238
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILALE 450
+V + F+ + +S D ++WD++TG R+++AL+
Sbjct: 1239 SAVTCLQFNSRFVVTSSD--DGTVKLWDVKTGDFIRNLVALD 1278
Score = 38 (18.4 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 139 RRAAVLAVPTNDMAVRAR 156
R+A +LA P +D R R
Sbjct: 937 RKAQILAEPRSDRPKRGR 954
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 297 (109.6 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 80/289 (27%), Positives = 150/289 (51%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSA-LKGHTERATDVTFSPVSNHVATS 346
P++G ++S GNL+A++ VKIW P+L+ S H++ V F + + T+
Sbjct: 62 PVNGVAWSPKGNLVASAGHDRTVKIWE-PKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTA 120
Query: 347 SADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
S D++A++W +++F + + F P+GK + T S DK+ R++DVD+G E +
Sbjct: 121 SDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSG-ECV 179
Query: 406 LQEGHSRSV-YGIAFHPDGS-LAASCGLDALARVWDLRTGRSILALEG-HVKPVLGISFS 462
R+ +A+HP G+ LA + G + + +++D+ +G +L L H PV ++F
Sbjct: 180 RTFTEERAAPRQLAWHPWGNMLAVALGCNRI-KIFDV-SGSQLLQLYVVHSAPVNDVAFH 237
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
P+G+ L +G +D T RI DL + + +Y + H++ ++ V F ++G TG D + V
Sbjct: 238 PSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFS-RDGDKFATGGSDRQLLV 296
Query: 523 WSGR-------DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKL 564
W F+ +L+ + + + E S + S+D I++
Sbjct: 297 WQSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRI 345
Score = 267 (99.0 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 72/287 (25%), Positives = 131/287 (45%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G ++ + DG +ATSS V +W++ + + H+ V +SP N
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 343 VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
VA++ DRT ++W + F H + + F +G + T S DK+ ++W V
Sbjct: 75 VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-EGHVKPVLGIS 460
+ + V F P+G L A+ D R++D+ +G + E P ++
Sbjct: 135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAP-RQLA 193
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
+ P G LA N +I+D+ + L + HS ++ V F P G+FL++GS D T+
Sbjct: 194 WHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPS-GHFLLSGSDDRTI 252
Query: 521 KVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
++ + + + +L+GH V ++ D AT DR + +W +
Sbjct: 253 RILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQS 299
Score = 236 (88.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 55/209 (26%), Positives = 97/209 (46%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D +L F GH + ++ F P G + T+S D T LW+++ + HS V G+
Sbjct: 7 DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGV 66
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFSPNGYHLATGGEDNT 476
A+ P G+L AS G D ++W+ + R + H K V + F G+ + T +D +
Sbjct: 67 AWSPKGNLVASAGHDRTVKIWEPKL-RGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKS 125
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
+IW + +R+ + +N + KF P G + T S D +V+++ + V++ +
Sbjct: 126 AKIWRVARRQFVSSFAQQNNWVRSAKFSPN-GKLVATASDDKSVRIYDVDSGECVRTFTE 184
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
A L HP +A IK++
Sbjct: 185 ERAAPRQLAWHPWGNMLAVALGCNRIKIF 213
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 316 (116.3 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 80/253 (31%), Positives = 123/253 (48%)
Query: 278 LDCTESGDDRPLS--GCSYSHDGNL-LATSSLSG---VVKIWSMPRLQKFSALKGHTERA 331
++C DD + GC+ D ++ L +S+ +G +V + P LQK S+L GHT
Sbjct: 352 VNCAAFSDDASMFALGCA---DSSIHLYSSTNNGPQPLVGSQNEP-LQK-SSLIGHTRPV 406
Query: 332 TDVTFSPVSNHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
V+ SP + + S D RLW+ D S + + GH + + F P G Y T S D
Sbjct: 407 FGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHD 466
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE 450
+T RLWDV+ L + GH V ++FHP+ + A+ D R+WD+RTG ++
Sbjct: 467 QTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFN 526
Query: 451 GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYF 510
H PV + S +G LA+ E ++WDLR HS+++ + F +
Sbjct: 527 AHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFS-YDNKI 585
Query: 511 LVTGSYDMTVKVW 523
LV+G D V W
Sbjct: 586 LVSGGADTDVNFW 598
Score = 312 (114.9 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 70/206 (33%), Positives = 99/206 (48%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G RP+ G S S + + S G ++WS GH DV FSP +
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYF 460
Query: 344 ATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
AT+S D+TARLW+ + + L F GH + + ++FHP+ YL T S D T R+WDV TG
Sbjct: 461 ATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGG 520
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
+ + H V + DG AS + +VWDLR+ ++ H V +SFS
Sbjct: 521 TVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFS 580
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSL 488
+ L +GG D WDL R +L
Sbjct: 581 YDNKILVSGGADTDVNFWDLTYRNNL 606
Score = 280 (103.6 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 56/166 (33%), Positives = 83/166 (50%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+R V+G++ P SC D R+W T +I+ GH P+ + FSP GY+
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYF 460
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
AT D T R+WD+ L V H N + V F P Y L TGS D T ++W R
Sbjct: 461 ATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAY-LATGSSDHTTRMWDVRTG 519
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
V+ + H + V++L + D S+A+ IK+W R+ ++H
Sbjct: 520 GTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSS-NQH 564
Score = 236 (88.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 56/199 (28%), Positives = 91/199 (45%)
Query: 367 GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLA 426
GH + ++ P +++ + S D RLW DT ++ GH+ ++ + F P G
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYF 460
Query: 427 ASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRK 486
A+ D AR+WD+ + GH V +SF PN +LATG D+T R+WD+R
Sbjct: 461 ATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGG 520
Query: 487 SLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
++ V AH + +S + +G L + +KVW R S H + V SL
Sbjct: 521 TVRVFNAHHSPVSALCMSA-DGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSF 579
Query: 547 HPDEQSIATVSHDRWIKLW 565
D + + + D + W
Sbjct: 580 SYDNKILVSGGADTDVNFW 598
Score = 186 (70.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
+L GH +PV G+S SP + + ED R+W + ++ H+ I V+F P
Sbjct: 398 SLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPF- 456
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
GY+ T S+D T ++W ++ GH+ V + HP+ +AT S D ++W
Sbjct: 457 GYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDV 516
Query: 568 RNKG 571
R G
Sbjct: 517 RTGG 520
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 295 (108.9 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 74/270 (27%), Positives = 133/270 (49%)
Query: 301 LATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
+ T SL +VK+W RL+ +L+GH V S A+SS D RLW+ +
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 359 -GSLLNTFQ-GHLDRLARMAFHPSGKYLGT-TSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
G + + G +D +AF P ++L T T K ++ V++G + + + +
Sbjct: 95 NGKQMKSIDAGPVDAWT-LAFSPDSQHLATGTHMGKV-NIFGVESGKKEYSLDTRGKFIL 152
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+ L T +D
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 212
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLS 535
+I+D++ + H++ + V F P + +F V+ S D +VKVW + +
Sbjct: 213 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTCIHTFF 271
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
H+ +V + + + I +V D+ I ++
Sbjct: 272 DHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 252 (93.8 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 62/264 (23%), Positives = 118/264 (44%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + + E L L + G + SH + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S H+AT + ++ + G + + +A+ P
Sbjct: 99 MKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVW 523
VK+ G +V+ D + V+
Sbjct: 279 GVKYNGN-GSKIVSVGDDQEIHVY 301
Score = 230 (86.0 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 366 QGHLDRLARMAFHPSGKY----LGTTSFDKTWRLWDV-DTGVELLLQ-EGHSRSVYGIAF 419
Q H D + +A+ + K + T S D ++W D +EL EGH V +
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDI 72
Query: 420 HPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI 479
+AAS LDA R+WDL G+ + +++ ++FSP+ HLATG I
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNI 132
Query: 480 WDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
+ + K Y + I + + P +G +L +G+ D + ++ KL+ +L GH
Sbjct: 133 FGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
+ SL PD Q + T S D +IK++ ++
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Score = 197 (74.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 50/190 (26%), Positives = 88/190 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT + G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH+
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ T I H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV 292
Query: 472 GEDNTCRIWD 481
G+D ++D
Sbjct: 293 GDDQEIHVYD 302
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
H +SS+D++ ++W+ + ++TF H D++ + ++ +G + + D+ ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>TAIR|locus:2018319 [details] [associations]
symbol:MAC3A "AT1G04510" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0005730
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0042742 eggNOG:COG2319 GO:GO:0006397 GO:GO:0045087
GO:GO:0005681 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 EMBL:AY039940 EMBL:AY142564 EMBL:AK221436
IPI:IPI00529251 PIR:E86177 RefSeq:NP_563708.1 UniGene:At.21449
HSSP:P32523 ProteinModelPortal:Q94BR4 SMR:Q94BR4 IntAct:Q94BR4
STRING:Q94BR4 PaxDb:Q94BR4 PRIDE:Q94BR4 DNASU:839503
EnsemblPlants:AT1G04510.1 GeneID:839503 KEGG:ath:AT1G04510
GeneFarm:3007 TAIR:At1g04510 HOGENOM:HOG000177308 InParanoid:Q94BR4
OMA:FPDANSV PhylomeDB:Q94BR4 ProtClustDB:CLSN2687671
Genevestigator:Q94BR4 Uniprot:Q94BR4
Length = 523
Score = 312 (114.9 bits), Expect = 7.9e-26, P = 7.9e-26
Identities = 83/284 (29%), Positives = 141/284 (49%)
Query: 296 HDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
H +++AT + ++ P Q S L GH+++ T + F ++ V T+S+D+T R+W
Sbjct: 232 HSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
Query: 356 --NTDGSLLN--TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGH 410
+ DG+ + T + H + + H + KY + S D TW +D+ +G+ L + +
Sbjct: 292 GCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDAS 351
Query: 411 SRSV-Y-GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
V Y AFHPDG + + ++ ++WD+++ ++ GH + ISFS NGY L
Sbjct: 352 ENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFL 411
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDM------TVKV 522
AT D R+WDLRK K+ + V+F+ Y + S D+ +VK
Sbjct: 412 ATAALDGV-RLWDLRKLKNFRTFDFPD--ANSVEFDHSGSYLGIAAS-DIRVFQAASVKA 467
Query: 523 -WSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
W+ K + LSG K TS+ D + IA S DR ++++
Sbjct: 468 EWN--PIKTLPDLSG-TGKATSVKFGLDSKYIAVGSMDRNLRIF 508
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/256 (23%), Positives = 107/256 (41%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSA---LKGHTERATDVTFS 337
T +G + ++ + D +L+ T+S V+IW +++ LK H+ VT
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVH 318
Query: 338 PVSNHVATSSADRTARLWNTDGSLLN---TFQGHLD-RLARMAFHPSGKYLGTTSFDKTW 393
+ + ++S D T ++ L T D AFHP G LGT +
Sbjct: 319 ATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIV 378
Query: 394 RLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHV 453
++WDV + + GH+ + I+F +G A+ LD + R+WDLR ++ +
Sbjct: 379 KIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV-RLWDLRKLKNFRTFD--F 435
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS----LYVIPAHSNL--ISQVKFEPQE 507
+ F +G +L D R++ K+ + +P S + VKF
Sbjct: 436 PDANSVEFDHSGSYLGIAASD--IRVFQAASVKAEWNPIKTLPDLSGTGKATSVKFGLDS 493
Query: 508 GYFLVTGSYDMTVKVW 523
Y V GS D ++++
Sbjct: 494 KYIAV-GSMDRNLRIF 508
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 40/152 (26%), Positives = 66/152 (43%)
Query: 427 ASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR- 485
A+ G+D A ++D +G+ + L GH K V I F + + T D T RIW +
Sbjct: 238 ATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDG 297
Query: 486 --KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT---VKVWSGRDFKLVKSLSGHEAK 540
S + + HS + V YF V+ S D T + SG V S ++
Sbjct: 298 NYTSRHTLKDHSAEVRAVTVHATNKYF-VSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 541 VTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
T+ HPD + T + +K+W +++ +
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKSQAN 388
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 313 (115.2 bits), Expect = 8.7e-26, P = 8.7e-26
Identities = 79/257 (30%), Positives = 122/257 (47%)
Query: 282 ESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSN 341
+SGD S C +S DG LAT + +++W + GH + + F+
Sbjct: 313 KSGDLYIRSVC-FSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGR 371
Query: 342 HVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
++A+ S D+T RLW+ +G L+ T D + +A P G Y+ S DKT R+WD T
Sbjct: 372 YIASGSGDKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTT 430
Query: 401 G--VELLLQ-EGHSRSVYGIAFHPDGSLAASCGLDALARVWDL-----------RTGRSI 446
G VE L +GH SVY +AF P+G S LD ++W+L + G+
Sbjct: 431 GYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCH 490
Query: 447 LALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQ 506
EGH VL + +P+G+ + +G +D + WD + ++ H N + V P
Sbjct: 491 RTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPT 550
Query: 507 EGYFLVTGSYDMTVKVW 523
G TGS DM ++W
Sbjct: 551 -GNLFATGSGDMRARIW 566
Score = 298 (110.0 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 75/247 (30%), Positives = 117/247 (47%)
Query: 334 VTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V FSP ++AT + D+ R+W+ ++ + F GH + + F +G+Y+ + S DKT
Sbjct: 322 VCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKT 381
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE-- 450
RLWD+ G +L+ V +A PDG A+ LD RVWD TG + LE
Sbjct: 382 VRLWDIAEG-KLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENP 440
Query: 451 -GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY-----------VIPAHSNLI 498
GH V ++F+PNG L +G D T ++W+L + Y H + +
Sbjct: 441 DGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFV 500
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
V P +G+++++GS D V+ W L GH+ V S+ P AT S
Sbjct: 501 LSVCLTP-DGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSG 559
Query: 559 DRWIKLW 565
D ++W
Sbjct: 560 DMRARIW 566
Score = 210 (79.0 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 53/172 (30%), Positives = 89/172 (51%)
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG--- 458
VEL+ H V + F DG A+ G + A+++D+ G+++ L+ G
Sbjct: 260 VELVHHLVHDSVVCCVRFSRDGKYLAT-GCNRSAQIFDVTLGQNVAVLQDESVDKSGDLY 318
Query: 459 ---ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
+ FSP+G +LATG ED R+WD+ R ++ H I + F G ++ +GS
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGN-GRYIASGS 377
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
D TV++W + KLV +LS + VT++ + PD +A S D+ +++W T
Sbjct: 378 GDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVWDT 428
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 311 (114.5 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 71/257 (27%), Positives = 115/257 (44%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 190 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 248
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ + YL + DK + WD++ + GH +VYG+ HP + +C
Sbjct: 249 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 308
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
D+ AR+WD+RT S+ L GH V + + TG D T R+WDL K+ +
Sbjct: 309 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 368
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H + V P Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 369 TNHKKSVRAVVLHPLH-YTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNTDGV 426
Query: 552 SIATVSHDRWIKLWSTR 568
++ + + LW R
Sbjct: 427 LVSGADNGT-MHLWDWR 442
Score = 295 (108.9 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 65/217 (29%), Positives = 107/217 (49%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ L GHL + +A P ++ T S D+T ++WD+ +G L GH +V
Sbjct: 190 WHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTV 249
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+ SCG D + WDL + I GH+ V G+ P L T D
Sbjct: 250 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRD 309
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+T RIWD+R + S++ + H+N ++ V+ + E ++TGS+D T+++W K +L
Sbjct: 310 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ-IITGSHDTTIRLWDLVAGKTRVTL 368
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
+ H+ V ++ +HP + A+ S D IK W + G
Sbjct: 369 TNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGG 404
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/284 (24%), Positives = 122/284 (42%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T S +KIW + + +L GH V S S ++ + D+
Sbjct: 209 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDK 268
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T S D T R+WDV T + G
Sbjct: 269 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSG 328
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D R+WDL G++ + L H K V + P Y A
Sbjct: 329 HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFA 388
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+G DN + W + + H+ +I+ + +G LV+G+ + T+ +W +G
Sbjct: 389 SGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNT-DGV-LVSGADNGTMHLWDWRTGY 445
Query: 527 DFKLVKSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+F+ V + G E+ + + E + T D+ IK++
Sbjct: 446 NFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 489
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 260 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 569 NKGDEHAM 576
K H +
Sbjct: 319 TKASVHTL 326
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 293 (108.2 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 73/270 (27%), Positives = 129/270 (47%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSM--PRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
G + + + T SL +VK+W RL +L+GH V S A+SS
Sbjct: 25 GTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 84
Query: 349 DRTARLWNTD-GSLLNTFQ-GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D RLW+ + G + + G +D +AF P +YL T + ++ V++G +
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ + + IA+ PDG AS +D + ++D+ TG+ + LEGH P+ ++FSP+
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
L T +D +I+D++ + H++ + V F P + +F V+ S D +VKVW
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVG 262
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATV 556
V + H+ +V + + + I +V
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 292
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 57/244 (23%), Positives = 110/244 (45%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK 320
S+DD + + E L L + G + SH + A+SSL +++W + ++
Sbjct: 39 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 321 FSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHP 379
++ A + FSP S ++AT + ++ + G + + +A+ P
Sbjct: 99 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
GKYL + + D ++D+ TG L EGH+ + + F PD L + D +++D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
++ L GH VL ++F P+ H + D + ++WD+ R ++ H + +
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 500 QVKF 503
VK+
Sbjct: 279 GVKY 282
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 60/238 (25%), Positives = 112/238 (47%)
Query: 340 SNHVATSSADRTARLWNTDGSLLN---TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
S V T S D ++W L+ + +GH + + + ++S D RLW
Sbjct: 32 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++ G ++ + + +AF PD A+ ++ + +G+ +L+ K +
Sbjct: 92 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
L I++SP+G +LA+G D I+D+ K L+ + H+ I + F P + LVT S
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASD 210
Query: 517 DMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
D +K++ + L +LSGH + V ++ PD+ + S D+ +K+W + H
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 268
Score = 229 (85.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 62/221 (28%), Positives = 101/221 (45%)
Query: 356 NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTT----SFD---KTWRLWDVDTGVELLLQE 408
N G L Q H D + +A+ + K T S D K W+ D ++ L E
Sbjct: 3 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL-E 61
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH V + +AAS LDA R+WDL G+ I +++ ++FSP+ +L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
ATG I+ + K Y + I + + P +G +L +G+ D + ++
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATG 180
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
KL+ +L GH + SL PD Q + T S D +IK++ ++
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/182 (25%), Positives = 84/182 (46%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D LAT + G V I+ + +K +L + + +SP ++A+ + D
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+++ G LL+T +GH + + F P + L T S D +++DV GH+
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 232
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
V +AF PD + S D +VWD+ T + H V G+ ++ NG + +
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 292
Query: 472 GE 473
G+
Sbjct: 293 GD 294
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G P+ ++S D LL T+S G +KI+ + L GH +V F P
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSG 381
H +SS+D++ ++W+ + ++TF H D++ + ++ +G
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 286
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 293 (108.2 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 77/278 (27%), Positives = 129/278 (46%)
Query: 295 SHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARL 354
S DG L ++S + V+ +W + K + + + FSP + +A + +
Sbjct: 30 STDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMTCAFSPSTKSIAAGGLNNFCVV 89
Query: 355 WNTDGSLLNTFQ--GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSR 412
++T + + GH ++ + G L T S DKT WD++ + + +GH
Sbjct: 90 YDTSVPDADPVELVGHAGFVSCCKYVDDGHLL-TGSGDKTCMFWDIEQAKAISVLKGHEM 148
Query: 413 SVYGIAFHPDG-SLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATG 471
+ + F P +L + G D LA++WDLR G+ + ISF P+ TG
Sbjct: 149 DIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFFPSNADFVTG 208
Query: 472 GEDNTCRIWDLRKRKSL--YVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
ED R +D+R + Y P+ S+ I+ V F + G L D T +VW K
Sbjct: 209 AEDGIARCFDIRASAEIFQYSSPS-SSPINSVLFS-KSGKLLFIAK-DKTCEVWDSISSK 265
Query: 530 LVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ SL+GHE +++SL + D +AT S D ++LWS+
Sbjct: 266 TITSLTGHENRISSLALTSDGTMLATGSWDECVRLWSS 303
Score = 207 (77.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/195 (28%), Positives = 86/195 (44%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS-NHVATSS 347
+S C Y DG+LL T S W + + + S LKGH + F P + N T
Sbjct: 109 VSCCKYVDDGHLL-TGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGG 167
Query: 348 ADRTARLWNTDGSLL-NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D+ A+LW+ + TF G+ + ++F PS T + D R +D+ E+
Sbjct: 168 CDKLAKLWDLRAAYCCATFPGNTSDINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQ 227
Query: 407 QEGHSRS-VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNG 465
S S + + F G L D VWD + ++I +L GH + ++ + +G
Sbjct: 228 YSSPSSSPINSVLFSKSGKLLF-IAKDKTCEVWDSISSKTITSLTGHENRISSLALTSDG 286
Query: 466 YHLATGGEDNTCRIW 480
LATG D R+W
Sbjct: 287 TMLATGSWDECVRLW 301
Score = 192 (72.6 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 53/205 (25%), Positives = 84/205 (40%)
Query: 356 NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
N G+ + L ++ + GKYL + S + +WD+ T ++ E S +
Sbjct: 10 NIQGT--RVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIM 67
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRT-GRSILALEGHVKPVLGISFSPNGYHLATGGED 474
AF P A+ GL+ V+D + L GH V + +G HL TG D
Sbjct: 68 TCAFSPSTKSIAAGGLNNFCVVYDTSVPDADPVELVGHAGFVSCCKYVDDG-HLLTGSGD 126
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
TC WD+ + K++ V+ H I + F P VTG D K+W R +
Sbjct: 127 KTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATF 186
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHD 559
G+ + + S+ P T + D
Sbjct: 187 PGNTSDINSISFFPSNADFVTGAED 211
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 292 (107.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 123
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 184 KKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 300
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V VW +++ L GH + + HPDE I + S D+
Sbjct: 301 IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 290 (107.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 74/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LWN G N T +GH + + ++ G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R +I + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 181 DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + VK G+ E + PD
Sbjct: 240 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 299 SKIAAGSADRFVYVWDTTSR 318
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W++ A L+GH V+ + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 178
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R +++ + +V ++ + I + D IK+W R NK
Sbjct: 179 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V++W
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 264 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 323
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDK 391
GH + +AFHP + + S DK
Sbjct: 324 LPGHAGSINEVAFHPDEPIILSASSDK 350
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 292 (107.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 122
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 183 KKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 241
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 299
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V VW +++ L GH + + HPDE I + S D+
Sbjct: 300 IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDK 349
Score = 290 (107.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 74/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LWN G N T +GH + + ++ G
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 179
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R +I + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 180 DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 238
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + VK G+ E + PD
Sbjct: 239 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 297
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 298 SKIAAGSADRFVYVWDTTSR 317
Score = 185 (70.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W++ A L+GH V+ + ++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 177
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R +++ + +V ++ + I + D IK+W R NK
Sbjct: 178 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V++W
Sbjct: 203 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 263 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 322
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDK 391
GH + +AFHP + + S DK
Sbjct: 323 LPGHAGSINEVAFHPDEPIIISASSDK 349
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 292 (107.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 123
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 184 KKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 300
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V VW +++ L GH + + HPDE I + S D+
Sbjct: 301 IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 290 (107.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 74/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LWN G N T +GH + + ++ G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R +I + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 181 DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + VK G+ E + PD
Sbjct: 240 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 299 SKIAAGSADRFVYVWDTTSR 318
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W++ A L+GH V+ + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 178
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R +++ + +V ++ + I + D IK+W R NK
Sbjct: 179 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V++W
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 264 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 323
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDK 391
GH + +AFHP + + S DK
Sbjct: 324 LPGHAGSINEVAFHPDEPIILSASSDK 350
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 292 (107.8 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 123
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 184 KKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLL-RCSWSP-DGSK 300
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V VW +++ L GH + + HPDE I + S D+
Sbjct: 301 IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 287 (106.1 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 73/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LWN G N T +GH + + ++ G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R +I + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 181 DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + V+ G+ E + PD
Sbjct: 240 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDG 298
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 299 SKIAAGSADRFVYVWDTTSR 318
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W++ A L+GH V+ + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 178
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R +++ + +V ++ + I + D IK+W R NK
Sbjct: 179 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V++W
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 264 DVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 323
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDK 391
GH + +AFHP + + S DK
Sbjct: 324 LPGHAGSINEVAFHPDEPIILSASSDK 350
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 309 (113.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 71/258 (27%), Positives = 117/258 (45%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 194 WHPP-WKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 252
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ +A YL + DK + WD++ + GH +VY + HP + +C
Sbjct: 253 VRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSR 312
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT-GGEDNTCRIWDLRKRKSLYV 490
DA ARVWD+RT ++ L GH V + + T G D T R+WDL K+
Sbjct: 313 DATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRAT 372
Query: 491 IPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDE 550
+ H + + P++ Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 373 LTNHKKSVRALVLHPRQ-YTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLAVNSDG 430
Query: 551 QSIATVSHDRWIKLWSTR 568
++ + I +W R
Sbjct: 431 VLVSGADNGT-IHMWDWR 447
Score = 230 (86.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 70/293 (23%), Positives = 126/293 (43%)
Query: 298 GNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
GN T S +KIW + + +L GH V S S ++ + D+ + W+
Sbjct: 219 GNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWD 278
Query: 357 TD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
+ ++ + GHL + + HP+ L T S D T R+WD+ T + GH+ +V
Sbjct: 279 LEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVA 338
Query: 416 GIAFHPDGSLAASCGL-DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
+ + G D R+WDL G++ L H K V + P Y A+G D
Sbjct: 339 TVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPD 398
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGRDFKLV 531
N + W + + H+ +I+ + +G LV+G+ + T+ +W +G +F+ +
Sbjct: 399 NI-KQWKFPDGNFIQNLSGHNAIINTLAVN-SDGV-LVSGADNGTIHMWDWRTGYNFQRI 455
Query: 532 KSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD 579
+ G E+ + S E + T D+ IK++ + E + V+
Sbjct: 456 HAAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVYKEDDTATEESHPVN 508
Score = 191 (72.3 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 67/256 (26%), Positives = 107/256 (41%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G + G + S+ L + VK W + + GH D+ P +
Sbjct: 247 TGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDV 306
Query: 343 VATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVDT 400
+ T S D TAR+W+ ++T GH + +A + + + T S D T RLWD+
Sbjct: 307 LVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVA 366
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G H +SV + HP AS D + + W G I L GH + ++
Sbjct: 367 GKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQ-WKFPDGNFIQNLSGHNAIINTLA 425
Query: 461 FSPNGYHLATGGEDNTCRIWDLR-----KRKSLYVIP----AHSNLISQVKFEPQEGYFL 511
+ +G L +G ++ T +WD R +R V P + S + S V F+ E L
Sbjct: 426 VNSDGV-LVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCV-FDQSESR-L 482
Query: 512 VTGSYDMTVKVWSGRD 527
+T D T+KV+ D
Sbjct: 483 ITAEADKTIKVYKEDD 498
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 37/128 (28%), Positives = 55/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 264 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIR 322
Query: 569 NKGDEHAM 576
K + H +
Sbjct: 323 TKANVHTL 330
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 311 (114.5 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 79/268 (29%), Positives = 131/268 (48%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER 330
KK+ +L+ + + D + ++S DG L T + +K+W + + GH +
Sbjct: 345 KKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQD 404
Query: 331 ATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSF 389
+ FS + + S DRTARLW+ + G + + + + +A P+ +++ S
Sbjct: 405 IYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSL 463
Query: 390 DKTWRLWDVD-TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI-- 446
D+ R+W V T VE L EGH SVY IAF PD S+ S LD +VW+L+ RS+
Sbjct: 464 DQIIRVWSVSGTLVERL--EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGL 521
Query: 447 LALE----------GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
A++ GH VL ++ SP+ +G +D + + WDL+ +S H N
Sbjct: 522 SAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKN 581
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVWS 524
+ V F P +G +GS D+ ++WS
Sbjct: 582 SVISVCFSP-DGRQFASGSGDLRARIWS 608
Score = 285 (105.4 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 79/292 (27%), Positives = 142/292 (48%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHT-ERATD-----VTFSPVSNHVATSS 347
+S++G LAT + ++ + +K L + + + D + FSP ++ T +
Sbjct: 321 FSNNGKYLATGC-NQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGT 379
Query: 348 ADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
DR +LW+ + F GH + + F +G+++ + S D+T RLWDV+TG + +L
Sbjct: 380 EDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETG-QCIL 438
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
+ V IA P+ A LD + RVW + +G + LEGH + V I+FSP+
Sbjct: 439 KLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSS 497
Query: 467 HLATGGEDNTCRIWDLRKRKSL---YVIP---------AHSNLISQVKFEPQEGYFLVTG 514
L +G D T ++W+L+ +S+ + P H++ + V P + L +G
Sbjct: 498 ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGL-SG 556
Query: 515 SYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
S D +++ W + + + GH+ V S+ PD + A+ S D ++WS
Sbjct: 557 SKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Score = 271 (100.5 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 62/213 (29%), Positives = 101/213 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERA-TDVTFSPVSN 341
SG ++ + +SH+G + + S ++W + Q LK E T + SP
Sbjct: 399 SGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQ--CILKLEIENGVTAIAISPNDQ 456
Query: 342 HVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT- 400
+A S D+ R+W+ G+L+ +GH + + +AF P L + S DKT ++W++
Sbjct: 457 FIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQAT 516
Query: 401 ---GVELLLQEG--------HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
G+ + EG H+ V +A PD S D + WDL+TG+S L
Sbjct: 517 RSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTC 576
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
+GH V+ + FSP+G A+G D RIW +
Sbjct: 577 QGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 433 ALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI- 491
A RV+++ + LE H V + FS NG +LATG + ++D++ K L+ +
Sbjct: 297 ACKRVFNINL---VHTLE-HPSVVCCVKFSNNGKYLATGC-NQAANVFDVQTGKKLFTLH 351
Query: 492 -----PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
P+ + + F P +G +LVTG+ D +K+W K+ SGHE + SLD
Sbjct: 352 EESPDPSRDLYVRTIAFSP-DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDF 410
Query: 547 HPDEQSIATVSHDRWIKLW 565
+ + I + S DR +LW
Sbjct: 411 SHNGRFIVSGSGDRTARLW 429
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQK--FSALK----------GHTERA 331
G + ++S D ++L + SL +K+W + + SA+K GHT+
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFV 541
Query: 332 TDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
V SP S + S DR+ + W+ G T QGH + + + F P G+ + S D
Sbjct: 542 LSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGD 601
Query: 391 KTWRLWDVD 399
R+W +D
Sbjct: 602 LRARIWSID 610
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 291 (107.5 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 73/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P N +A++ DR LWN G N T +GH + + ++ G
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 206
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R ++ + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 207 DIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 265
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV++W R F + VK G+ E + PD
Sbjct: 266 TGLSLS-SEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 324
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 325 SKIAGGSADRFVYVWDTTSR 344
Score = 290 (107.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 77/290 (26%), Positives = 137/290 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + GN LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 149
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 150 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 209
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 210 KKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 268
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT RIWD+R K + + + H+ NL+ + + P +G
Sbjct: 269 SLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 326
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V VW +++ L GH V L HP+E I + S D+
Sbjct: 327 IAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDK 376
Score = 178 (67.7 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP G+ AS G D L +W++ A L+GH V+ + ++
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 145
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 146 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 204
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R V++ + +V ++ + I + D IK+W R NK
Sbjct: 205 LWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 253
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V+IW
Sbjct: 230 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 290 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYK 349
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDK 391
GH + +AFHP + + S DK
Sbjct: 350 LPGHAGSVNELAFHPEEPIILSASSDK 376
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 308 (113.5 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 71/257 (27%), Positives = 115/257 (44%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDR 371
W P + + + GH + P + T SADRT ++W+ G L + GH+
Sbjct: 189 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 247
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+ + YL + DK + WD++ + GH +VYG+ HP + +C
Sbjct: 248 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSR 307
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
D+ AR+WD+RT S+ L GH V + + TG D T R+WDL K+ +
Sbjct: 308 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 367
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H + V P Y +GS D +K W D +++LSGH A + +L ++ D
Sbjct: 368 TNHKKSVRAVVLHPLL-YTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNADGV 425
Query: 552 SIATVSHDRWIKLWSTR 568
++ + + LW R
Sbjct: 426 LVSGADNGT-MHLWDWR 441
Score = 292 (107.8 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 65/217 (29%), Positives = 107/217 (49%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ L GHL + +A P ++ T S D+T ++WD+ +G L GH +V
Sbjct: 189 WHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTV 248
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+ SCG D + WDL + I GH+ V G+ P L T D
Sbjct: 249 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRD 308
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+T RIWD+R + S++ + H+N ++ V+ + E ++TGS+D T+++W K +L
Sbjct: 309 STARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ-IITGSHDTTIRLWDLVAGKTRVTL 367
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
+ H+ V ++ +HP + A+ S D IK W + G
Sbjct: 368 TNHKKSVRAVVLHPLLYTFASGSPDN-IKQWKFPDGG 403
Score = 220 (82.5 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 69/284 (24%), Positives = 122/284 (42%)
Query: 292 CSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN T S +KIW + + +L GH V S S ++ + D+
Sbjct: 208 CIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDK 267
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + + HP+ L T S D T R+WDV T + G
Sbjct: 268 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSG 327
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D R+WDL G++ + L H K V + P Y A
Sbjct: 328 HTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFA 387
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+G DN + W + + H+ +I+ + +G LV+G+ + T+ +W +G
Sbjct: 388 SGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNA-DGV-LVSGADNGTMHLWDWRTGY 444
Query: 527 DFKLVKSL--SGH---EAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+F+ V + G E+ + + E + T D+ IK++
Sbjct: 445 NFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 488
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P TG D T +IWDL K + H + + V +
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V LD+HP + T S D ++W R
Sbjct: 259 YLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVR 317
Query: 569 NKGDEHAM 576
K H +
Sbjct: 318 TKASVHTL 325
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 310 (114.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 79/270 (29%), Positives = 128/270 (47%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT- 357
N+L + V++W+M + L+GHT + S N + S D T R+W+
Sbjct: 303 NILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSD-KNTAISGSRDTTLRIWDLR 361
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G+ + GH + +A H G + + S+D T R+W + G L GH +Y I
Sbjct: 362 TGTCRSVLVGHQASVRCLAVH--GDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAI 419
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
AF DG A+ LD R+WD TG+ L+GH V + S G L TGG D +
Sbjct: 420 AF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSV 475
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
R+W L + ++ + AH N ++ ++F+ +V+G D VKVW R +L++ LS
Sbjct: 476 RVWSLTRMAPIHRLAAHDNSVTSLQFDNNR---IVSGGSDGRVKVWCLRTGQLLRELSTP 532
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWI-KLWS 566
V + ++ I + R + ++WS
Sbjct: 533 SDTVWRVTFEEEKAVIMSSRSGRTVMEVWS 562
Score = 293 (108.2 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 76/246 (30%), Positives = 115/246 (46%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGK 382
L+GH + P N + + DR R+WN G + +GH + +
Sbjct: 288 LEGHVMGVWAMV--PWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNT 345
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRT 442
+ + S D T R+WD+ TG + GH SV +A H G + S D ARVW +
Sbjct: 346 AI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVH--GDIVVSGSYDTTARVWSISE 402
Query: 443 GRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVK 502
GR + AL GH + I+F +G +ATG D + RIWD + ++ H++L+ Q++
Sbjct: 403 GRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQ 460
Query: 503 FEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWI 562
G LVTG D +V+VWS + L+ H+ VTSL D I + D +
Sbjct: 461 MS---GDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQF--DNNRIVSGGSDGRV 515
Query: 563 KLWSTR 568
K+W R
Sbjct: 516 KVWCLR 521
Score = 237 (88.5 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 68/214 (31%), Positives = 105/214 (49%)
Query: 366 QGHL--DRLARMAFHPSGKYLGTTSFDKTWRLWDVDT-GVELLLQEGHSRSVYGIAFHPD 422
Q H+ D+ + H + KY+ S D ++ DT G EGH V+ + P
Sbjct: 246 QRHISPDQGVVTSLHLTPKYI-VASLDNA-KIHVYDTNGENQKTLEGHVMGVWAMV--PW 301
Query: 423 GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL 482
++ S G D RVW++ TG SI L GH V + S ++ G D T RIWDL
Sbjct: 302 DNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAIS-GSRDTTLRIWDL 360
Query: 483 RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVT 542
R V+ H + V+ G +V+GSYD T +VWS + + +++LSGH +++
Sbjct: 361 RTGTCRSVLVGHQ---ASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIY 417
Query: 543 SLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
++ D + IAT S D +++W N G HA+
Sbjct: 418 AIAF--DGRRIATGSLDTSVRIWDP-NTGQCHAI 448
Score = 235 (87.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 65/234 (27%), Positives = 107/234 (45%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
C D N + S ++IW + S L GH +A+ + + V + S D T
Sbjct: 337 CLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGH--QASVRCLAVHGDIVVSGSYDTT 394
Query: 352 ARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
AR+W+ ++G L GH ++ +AF G+ + T S D + R+WD +TG + +GH
Sbjct: 395 ARVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGH 452
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+ S+ G G + G D RVW L I L H V + F N + +
Sbjct: 453 T-SLVG-QLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNN--RIVS 508
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
GG D ++W LR + L + S+ + +V FE ++ + + S ++VWS
Sbjct: 509 GGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVWS 562
Score = 230 (86.0 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 63/245 (25%), Positives = 112/245 (45%)
Query: 332 TDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
T + +P ++ S + +++T+G T +GH+ + A P L + D+
Sbjct: 257 TSLHLTP--KYIVASLDNAKIHVYDTNGENQKTLEGHV--MGVWAMVPWDNILVSGGCDR 312
Query: 392 TWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEG 451
R+W++ TG + L GH+ +V + D + A S D R+WDLRTG L G
Sbjct: 313 EVRVWNMATGESIYLLRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVG 371
Query: 452 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFL 511
H V ++ +G + +G D T R+W + + + L + H + I + F+ G +
Sbjct: 372 HQASVRCLAV--HGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD---GRRI 426
Query: 512 VTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
TGS D +V++W + L GH + V L + D ++ T D +++WS
Sbjct: 427 ATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGD--TLVTGGSDGSVRVWSLTRMA 484
Query: 572 DEHAM 576
H +
Sbjct: 485 PIHRL 489
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 290 (107.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 123
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 184 KKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 300
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V VW +++ L GH + + HPDE I + S D+
Sbjct: 301 IAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 289 (106.8 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 73/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LWN G N T +GH + + ++ G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R ++ + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 181 DIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + VK G+ E + PD
Sbjct: 240 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 299 SKIAAGSADRFVYVWDTTSR 318
Score = 186 (70.5 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W++ A L+GH V+ + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 178
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R V++ + +V ++ + I + D IK+W R NK
Sbjct: 179 LWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V++W
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 264 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYK 323
Query: 365 FQGHLDRLARMAFHPSGKYLGTTSFDK 391
GH + +AFHP + + S DK
Sbjct: 324 LPGHAGSINEVAFHPDEPIILSASSDK 350
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 309 (113.8 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 85/291 (29%), Positives = 138/291 (47%)
Query: 294 YSHDGNLLAT--SSLSGVVKIWS---MPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
+S DG LAT + + V + + + LQ+ S+ + V FSP ++AT
Sbjct: 307 FSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVE 366
Query: 349 DRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQ 407
D+ R+W+ + GH + + F GK L + S D+T LWDV+ G + L+
Sbjct: 367 DQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL 426
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
V + F PDG A+ LD + R+W +G + L GH + V ++FSP+G +
Sbjct: 427 HTDD-GVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKY 484
Query: 468 LATGGEDNTCRIWDLR----KRKSLY--------VIPAHSNLISQVKFEPQEGYFLVTGS 515
L +G DNT ++W+L+ S+Y H + I V P +G ++++GS
Sbjct: 485 LVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSP-DGKWIISGS 543
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
D T++ WS +L GH V S+ + P+ AT S D ++WS
Sbjct: 544 KDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWS 594
Score = 297 (109.6 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 73/270 (27%), Positives = 120/270 (44%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER 330
K + L + ++ D + ++S DG LAT ++IW + + + + L GH +
Sbjct: 331 KLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQE 390
Query: 331 ATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
+ FS + + S DRT LW+ + D + + F P G+++ S D
Sbjct: 391 IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLD 450
Query: 391 KTWRLWDVD-TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSIL-- 447
K R+W T VE L GH SVY +AF PDG S LD ++W+L+ ++
Sbjct: 451 KVIRIWTSSGTLVEQL--HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPS 508
Query: 448 ----------ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
GH +L ++ SP+G + +G +D T + W S + H+N
Sbjct: 509 MYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNS 568
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
+ V P G+ TGS D+ ++WS D
Sbjct: 569 VISVAVSPN-GHCFATGSGDLRARIWSYED 597
Score = 263 (97.6 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 69/227 (30%), Positives = 104/227 (45%)
Query: 267 DYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG 326
D A K+V L +G ++ + +S DG L + S V +W + ++ L
Sbjct: 374 DIAQKRVYRLL-----TGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL-- 426
Query: 327 HTERA-TDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLG 385
HT+ T V FSP +A S D+ R+W + G+L+ GH + + +AF P GKYL
Sbjct: 427 HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLV 486
Query: 386 TTSFDKTWRLWD---VDTGVELLLQEG---------HSRSVYGIAFHPDGSLAASCGLDA 433
+ S D T +LW+ V + +EG H + + PDG S D
Sbjct: 487 SGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDR 546
Query: 434 LARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
+ W + S L L+GH V+ ++ SPNG+ ATG D RIW
Sbjct: 547 TIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 197 (74.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 58/175 (33%), Positives = 94/175 (53%)
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL-------EGHVK 454
V+LL H+ + + F DG A+ G + A V+++ TG+ I L EG +
Sbjct: 290 VQLLHTLEHTSVICYVRFSADGKFLAT-GCNRAAMVFNVETGKLITLLQEESSKREGDLY 348
Query: 455 PVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTG 514
V ++FSP+G +LATG ED RIWD+ +++ ++ H I + F ++G LV+G
Sbjct: 349 -VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFS-KDGKTLVSG 406
Query: 515 SYDMTVKVWS--GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
S D TV +W + KL+ L + VT++ PD Q IA S D+ I++W++
Sbjct: 407 SGDRTVCLWDVEAGEQKLI--LHTDDG-VTTVMFSPDGQFIAAGSLDKVIRIWTS 458
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 306 (112.8 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 65/211 (30%), Positives = 107/211 (50%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ L+ GHL + +A P K+ + + D+T ++WD+ +G L GH +V
Sbjct: 187 WHRPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTV 246
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+A P SC D + + WDL T + I GH+ V ++ P L TGG D
Sbjct: 247 RGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRD 306
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
R+WD+R R +++V+ H+ +S++ + + ++TGS D TV++W K + L
Sbjct: 307 GVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQ-VITGSLDSTVRMWDLAAGKTMGVL 365
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ H+ V +L HP E + A+ S IK W
Sbjct: 366 THHKKGVRALATHPTEFTFASGSAGS-IKQW 395
Score = 203 (76.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/291 (21%), Positives = 121/291 (41%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN 356
D A+ + +KIW + + L GH + SP ++ + + D+ + W+
Sbjct: 212 DNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWD 271
Query: 357 TD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVY 415
+ ++ + GHL + +A HP+ L T D R+WD+ T + + GH+ +V
Sbjct: 272 LETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVS 331
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
+ + LD+ R+WDL G+++ L H K V ++ P + A+G
Sbjct: 332 ELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSA-G 390
Query: 476 TCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW-SGRDFKLVK-- 532
+ + W + + H+++I+ + Q +F + M+ W +G F+ +
Sbjct: 391 SIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGADNGSMSFWDWKTGHRFQSLDTT 450
Query: 533 ----SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG--DEHAMD 577
SL TS + I + D+ IK+W + + H +D
Sbjct: 451 AQPGSLQAESGIFTSTFDQSGSRLICGEA-DKTIKIWKEDMEATPETHPLD 500
Score = 172 (65.6 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 61/257 (23%), Positives = 105/257 (40%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T +G + G + S L + + +VK W + + GH +
Sbjct: 235 LRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALH 294
Query: 338 PVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
P + + T D AR+W+ S ++ GH ++ + + + T S D T R+W
Sbjct: 295 PTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMW 354
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D+ G + + H + V +A HP AS G + W G + EGH +
Sbjct: 355 DLAAGKTMGVLTHHKKGVRALATHPTEFTFAS-GSAGSIKQWKCPEGAFMQNFEGH-NSI 412
Query: 457 LGISFSPNGYHLATGGEDN-TCRIWDLR---KRKSLYV------IPAHSNLISQVKFEPQ 506
+ + S N ++ G DN + WD + + +SL + A S + + F+ Q
Sbjct: 413 IN-TLSVNDQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTST-FD-Q 469
Query: 507 EGYFLVTGSYDMTVKVW 523
G L+ G D T+K+W
Sbjct: 470 SGSRLICGEADKTIKIW 486
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
W R + + + GH+ V ++ P+ A+G D T +IWDL + + H +
Sbjct: 187 WH-RPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHIST 245
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
+ + P+ Y L + + D VK W K+++ GH + V +L +HP + T
Sbjct: 246 VRGLAVSPRHPY-LFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGG 304
Query: 558 HDRWIKLWSTRNKGDEHAM 576
D ++W R + + H +
Sbjct: 305 RDGVARVWDMRTRSNIHVL 323
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 304 (112.1 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 65/211 (30%), Positives = 105/211 (49%)
Query: 355 WNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
W+ L GHL + +A P ++ T + D+ ++WD+ +G L GH +V
Sbjct: 158 WHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTV 217
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGED 474
G+A SCG D + WDL + I GH+ V ++ P LAT G D
Sbjct: 218 RGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRD 277
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
+T RIWD+R + +++ + H+N ++ V + ++TGS+D TV++W K V +L
Sbjct: 278 STARIWDMRTKANVHTLTGHTNTVASVVAQATNPQ-IITGSHDSTVRLWDLAAGKSVCTL 336
Query: 535 SGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ H+ V S+ +HP A+ S D IK W
Sbjct: 337 TNHKKSVRSIVLHPSLYMFASASPDN-IKQW 366
Score = 291 (107.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 71/264 (26%), Positives = 118/264 (44%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP-RLQKFSALKGHTERATDVTFSPVSN 341
S D +G SH L+ + S W P +L + + GH + P +
Sbjct: 129 SNADMSANGAIASHL-QLIPKKAPSIPKPKWHAPWKLSR--VISGHLGWVRCIAVEPGNE 185
Query: 342 HVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
AT + DR ++W+ G L + GH+ + +A YL + D+ + WD++
Sbjct: 186 WFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEY 245
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
+ GH +VY +A HP + A+ G D+ AR+WD+RT ++ L GH V +
Sbjct: 246 NKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVV 305
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
+ TG D+T R+WDL KS+ + H + + P Y + S D +
Sbjct: 306 AQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSL-YMFASASPD-NI 363
Query: 521 KVWSGRDFKLVKSLSGHEAKVTSL 544
K W + K V+++SGH + V +
Sbjct: 364 KQWRCPEGKFVQNISGHTSIVNCM 387
Score = 250 (93.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 72/298 (24%), Positives = 132/298 (44%)
Query: 292 CSYSHDGN-LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
C GN AT + V+KIW + + +L GH V S ++ + DR
Sbjct: 177 CIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDR 236
Query: 351 TARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG 409
+ W+ + ++ + GHL + +A HP+ L T+ D T R+WD+ T + G
Sbjct: 237 QVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTG 296
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H+ +V + + D+ R+WDL G+S+ L H K V I P+ Y A
Sbjct: 297 HTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFA 356
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---SGR 526
+ DN + W + K + I H+++++ + EG LV+G + T+ W +G
Sbjct: 357 SASPDNI-KQWRCPEGKFVQNISGHTSIVNCMAAN-SEGV-LVSGGDNGTMFFWDWRTGY 413
Query: 527 DFKLVKS--LSGH---EAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD 579
+F+ ++ G EA + ++ + T D+ IK++ ++ E + ++
Sbjct: 414 NFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEASEESHPIN 471
Score = 166 (63.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 54/216 (25%), Positives = 86/216 (39%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-T 357
++LATS +IW M L GHT V + + T S D T RLW+
Sbjct: 269 DVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLA 328
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G + T H + + HPS + S D + W G + GH+ V +
Sbjct: 329 AGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNI-KQWRCPEGKFVQNISGHTSIVNCM 387
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKP--------VLGISFSPNGYHLA 469
A + +G L + G + WD RTG + + V+P + + F +G L
Sbjct: 388 AANSEGVLVSG-GDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLI 446
Query: 470 TGGEDNTCRIW--DLRKRKSLYVIPAHSNLISQVKF 503
T D T +++ D + + I +L+ + KF
Sbjct: 447 TAEADKTIKVYKEDDEASEESHPINWRPDLLKRRKF 482
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/128 (28%), Positives = 55/128 (42%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
+ GH+ V I+ P ATG D +IWDL K + H + + V +
Sbjct: 168 ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHP 227
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
Y G D VK W K+++ GH + V SL +HP +AT D ++W R
Sbjct: 228 YLFSCGE-DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMR 286
Query: 569 NKGDEHAM 576
K + H +
Sbjct: 287 TKANVHTL 294
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 306 (112.8 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 66/199 (33%), Positives = 99/199 (49%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ + D + L + S ++ W + +GH D+ SP S A++S
Sbjct: 341 PVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASAS 400
Query: 348 ADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
D TARLW+ D + L + GHL + + FHP+ YL T S DKT RLW G + L
Sbjct: 401 YDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 460
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH V +AF P+G S G D L ++WDL +G L GH + ++FS +
Sbjct: 461 FTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSS 520
Query: 467 HLATGGEDNTCRIWDLRKR 485
+A+ DN+ RIWD++ +
Sbjct: 521 VIASASMDNSVRIWDIKSK 539
Score = 305 (112.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 80/289 (27%), Positives = 130/289 (44%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
L+ S D LLAT + +K+WS+ KF + K H + + +++ +
Sbjct: 271 LNTAEASPDNKLLATGLNNSSIKLWSLT--SKFKS-KPHQIDVSHIHL--INDTLEVDEE 325
Query: 349 DRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
DRTA T+ +L GH + F P L + S D + R WD+++ +L +
Sbjct: 326 DRTA----TERKVL---LGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQ 378
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH+ V+ + P AS D AR+W + GH+ V + F PN +L
Sbjct: 379 GHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYL 438
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
ATG D T R+W ++ S+ + H + + F P G +LV+ D +K+W
Sbjct: 439 ATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPN-GQYLVSAGEDQLLKLWDLASG 497
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMD 577
L K L GH +TS+ D IA+ S D +++W ++K + D
Sbjct: 498 TLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPAD 546
Score = 246 (91.7 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 52/177 (29%), Positives = 85/177 (48%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G P+ S A++S ++WS R GH V F P SN++
Sbjct: 379 GHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYL 438
Query: 344 ATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
AT S D+T RLW+ G+ + F GH + +AF P+G+YL + D+ +LWD+ +G
Sbjct: 439 ATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGT 498
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
GH+ + + F D S+ AS +D R+WD+++ + +G +LG+
Sbjct: 499 LYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGV 555
Score = 41 (19.5 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 14 PV-SSAAVPDSQALISTIEAT 33
PV S+ +PDS AL+S E T
Sbjct: 341 PVYSTRFLPDSSALLSCSEDT 361
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 286 (105.7 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG----VELLLQEGHSRSVYG 416
LL GH R +HP G L T DKT R+W D + +L +GHSR++
Sbjct: 6 LLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRD 65
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGR--SILALEGHVKPVLGISFSPNGYHLATGGED 474
+A+ P G AS DA +WD ++G LEGH V +S+S +G LAT D
Sbjct: 66 VAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRD 125
Query: 475 NTCRIWDLRKR---KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW----SGRD 527
+ +W++ + + V+ H+ + +V++ P E L + SYD T+K++ + D
Sbjct: 126 KSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED-ILASASYDNTIKLYKEDLADSD 184
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
+ +L HE+ V S+ +A+ S D+ +K+W G+E
Sbjct: 185 WSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNE 230
Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 76/262 (29%), Positives = 121/262 (46%)
Query: 315 MPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS---LLNTF--QGHL 369
M +L+ L GH RA + P N +AT D+T R+W D S + T GH
Sbjct: 1 MGKLELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHS 60
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VEL-LLQEGHSRSVYGIAFHPDGSLAA 427
+ +A+ P G+YL + SFD T +WD +G E EGH V +++ GSL A
Sbjct: 61 RTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLA 120
Query: 428 SCGLDALARVWDLRTG---RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW--DL 482
+C D VW++ L H + V + + P+ LA+ DNT +++ DL
Sbjct: 121 TCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDL 180
Query: 483 RKR--KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAK 540
S + +H + + + F+ G L + S D TVK+W +++K G+E
Sbjct: 181 ADSDWSSFDTLVSHESTVWSISFDGS-GNRLASCSDDQTVKIW--QEYK-----PGNEFG 232
Query: 541 VTSLDIHPDEQSIATVS--HDR 560
V+ D P + + T++ H R
Sbjct: 233 VSCPDNTPVWKCVCTLAGYHSR 254
Score = 207 (77.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 291 GCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK----GHTERATDVTFSPVSNHVATS 346
G + GN+LAT ++IW+ Q++ A GH+ DV +SP ++A++
Sbjct: 19 GAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASA 78
Query: 347 SADRTARLWNT-DGSL-LN-TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
S D T +W+ G N T +GH + + +++ SG L T S DK+ +W+V E
Sbjct: 79 SFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDE 138
Query: 404 L---LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW--DLRTG--RSILALEGHVKPV 456
+ H++ V + +HP + AS D +++ DL S L H V
Sbjct: 139 YECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTV 198
Query: 457 LGISFSPNGYHLATGGEDNTCRIW 480
ISF +G LA+ +D T +IW
Sbjct: 199 WSISFDGSGNRLASCSDDQTVKIW 222
Score = 161 (61.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 69/299 (23%), Positives = 127/299 (42%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP--RLQKFSALKGHTERATDVTFSPVSN 341
G R + ++S G LA++S V IW + + L+GH V++S +
Sbjct: 58 GHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGS 117
Query: 342 HVATSSADRTARLWNT---D----GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWR 394
+AT S D++ +W D ++LNT H + ++ +HP L + S+D T +
Sbjct: 118 LLATCSRDKSVWVWEVAQEDEYECAAVLNT---HTQDVKKVEWHPHEDILASASYDNTIK 174
Query: 395 LWDVD------TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW-DLRTGRSIL 447
L+ D + + L+ H +V+ I+F G+ ASC D ++W + + G
Sbjct: 175 LYKEDLADSDWSSFDTLVS--HESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEFG 232
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
PV + GYH + + + C K+ L +++ ++ F+ E
Sbjct: 233 VSCPDNTPVWKCVCTLAGYHSRSVYDISWC------KQSGLLATACGDDMV-RI-FKEVE 284
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSI-ATVSHDRWIKLW 565
G + ++ T F++V S H V +++ +P + T S D +KLW
Sbjct: 285 G----SSPHEPT--------FEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/134 (26%), Positives = 65/134 (48%)
Query: 271 KKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKF---SALKGH 327
KK + T G + + S+S G+LLAT S V +W + + ++ + L H
Sbjct: 89 KKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTH 148
Query: 328 TERATDVTFSPVSNHVATSSADRTARLW-----NTDGSLLNTFQGHLDRLARMAFHPSGK 382
T+ V + P + +A++S D T +L+ ++D S +T H + ++F SG
Sbjct: 149 TQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGN 208
Query: 383 YLGTTSFDKTWRLW 396
L + S D+T ++W
Sbjct: 209 RLASCSDDQTVKIW 222
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 286 (105.7 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 73/258 (28%), Positives = 115/258 (44%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH + F+P +A+ S DR LW G N +GH + + + + G
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDL 440
+ + S DKT R WDV+TG ++ HS V G L S D A++WD+
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ 500
R +I + + +SFS + TGG DN ++WDLRK ++ + H + I+
Sbjct: 169 RQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Query: 501 VKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDEQS 552
+ P +G +L+T D + VW R + + VK GH E + PD
Sbjct: 228 MSLSP-DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTK 286
Query: 553 IATVSHDRWIKLWSTRNK 570
+ S DR + +W T ++
Sbjct: 287 VTAGSSDRMVHIWDTTSR 304
Score = 272 (100.8 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 77/295 (26%), Positives = 131/295 (44%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR-LQKFSALKGHTERATDVTFSPVSN 341
SG + ++ G L+A+ S + +W + + F LKGH D+ ++ +
Sbjct: 50 SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGS 109
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDV- 398
+ ++S D+T R W+ + G + H + G L + S D T +LWD+
Sbjct: 110 QIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMR 169
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
G + + + ++F + G+D +VWDLR G + + LEGH + G
Sbjct: 170 QRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPAHS-----NLISQVKFEPQEGY 509
+S SP+G +L T G DN +WD+R + + + + H NL+ + + P +G
Sbjct: 228 MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL-KCSWSP-DGT 285
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKL 564
+ GS D V +W + + L GH V HP E I + S D+ I L
Sbjct: 286 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 180 (68.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 42/170 (24%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTG-RSILALEGHVKPVLGISFS 462
++L GH +VY + F+P G+L AS D +W + ++ + L+GH +L + ++
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
+G + + D T R WD+ K + + HS+ ++ + +++GS D T K+
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 523 WSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
W R +++ + ++T++ I T D +K+W R KG+
Sbjct: 166 WDMRQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLR-KGE 213
Score = 124 (48.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 262 IDDEID-YALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM----P 316
+D+++ + L+K E+ T G ++G S S DG+ L T+ + + +W M P
Sbjct: 200 VDNDVKVWDLRKGEATM---TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAP 256
Query: 317 RLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDR 371
+ + +GH + ++SP V S+DR +W+T + GH
Sbjct: 257 QNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGS 316
Query: 372 LARMAFHPSGKYLGTTSFDKTWRLWDV 398
+ FHP+ +G+ S DK L ++
Sbjct: 317 VNECVFHPTEPIIGSCSSDKNIYLGEI 343
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 284 (105.0 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 74/281 (26%), Positives = 129/281 (45%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSA----LKGHTERATDVTFSPVSNHVATSSADRTARLW 355
++ +S G + + ++PR +A L GH+ V F P + H+A+ S DR+ LW
Sbjct: 35 VVKSSGQDGTL-VQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLW 93
Query: 356 NTDGSLLN--TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRS 413
NT G N GH + + + K + + S D T WD+++G + GH
Sbjct: 94 NTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEV 153
Query: 414 VYGIAFHPDGS-LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGG 472
+ + G + S D +WD R +I LE + P+ ++ S G + +GG
Sbjct: 154 INSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL-PITAVAQSEAGNEVFSGG 212
Query: 473 EDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF---- 528
DN +WD+RK+ +Y + H + I+ ++ P + L++ S+D TV+ W R F
Sbjct: 213 IDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP-DSQTLLSNSFDSTVRTWDIRPFAPTN 271
Query: 529 KLVKSLSGH----EAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ +++ G E + +P IA S DR + +W
Sbjct: 272 RHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVW 312
Score = 225 (84.3 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 50/204 (24%), Positives = 95/204 (46%)
Query: 367 GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL-LQEGHSRSVYGIAFHPDGSL 425
GH + + F P+ +++ + S D++ LW+ E + GH ++ + + D
Sbjct: 64 GHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKT 123
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH-LATGGEDNTCRIWDLRK 484
S D WD+ +G+ I GH + + + S G L + +D T IWD R+
Sbjct: 124 IFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQ 183
Query: 485 RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
++++ + + + + E F +G D + VW R +V S++GH +TSL
Sbjct: 184 KEAIDYLETELPITAVAQSEAGNEVF--SGGIDNAIHVWDIRKKAIVYSMAGHMDTITSL 241
Query: 545 DIHPDEQSIATVSHDRWIKLWSTR 568
++ PD Q++ + S D ++ W R
Sbjct: 242 EVSPDSQTLLSNSFDSTVRTWDIR 265
Score = 222 (83.2 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 70/279 (25%), Positives = 125/279 (44%)
Query: 301 LATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD- 358
+A+ S+ + +W+ + + + L GH D+ +S S + ++SAD T W+ +
Sbjct: 81 IASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIES 140
Query: 359 GSLLNTFQGHLDRLARMAFHPSGK-YLGTTSFDKTWRLWDV--DTGVELLLQEGHSRSVY 415
G + + GH + + + G+ L + S D T +WD ++ L E +
Sbjct: 141 GQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETE---LPIT 197
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDN 475
+A G+ S G+D VWD+R + ++ GH+ + + SP+ L + D+
Sbjct: 198 AVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDS 257
Query: 476 TCRIWDLR------KRKSLY---VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
T R WD+R + Y + NLI + + P G + GS D +V VW +
Sbjct: 258 TVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLI-RASWNPA-GDKIAAGSGDRSVVVWDFK 315
Query: 527 DFKLVKSLSGHEAKVTSLDIHPD-EQSIATVSHDRWIKL 564
K++ L GH+ V + P+ E I + S DR + L
Sbjct: 316 TGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 56/245 (22%), Positives = 100/245 (40%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG + +S D + ++S + W + Q+ GH E V S
Sbjct: 106 SGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQE 165
Query: 343 VATSSADR-TARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
+ S++D T +W+ ++ + L + +A +G + + D +WD+
Sbjct: 166 MLVSASDDGTMGIWDPRQKEAIDYLETELP-ITAVAQSEAGNEVFSGGIDNAIHVWDIRK 224
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR----TGRSILALEGHV--- 453
+ GH ++ + PD S D+ R WD+R T R I +G
Sbjct: 225 KAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGL 284
Query: 454 -KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
K ++ S++P G +A G D + +WD + K LY +P H ++ V+F P +V
Sbjct: 285 EKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIV 344
Query: 513 TGSYD 517
+ S D
Sbjct: 345 SASSD 349
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 312 (114.9 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 81/311 (26%), Positives = 144/311 (46%)
Query: 267 DYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP---RLQKFSA 323
D L V S L + ++ CS S+DGN + T S K+WS +L F
Sbjct: 1721 DVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNF-L 1779
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT----FQGHLDRLARMAFHP 379
+ G A + FSP +A + D T RL++ + + GH + + F P
Sbjct: 1780 IPGDCW-ANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSP 1838
Query: 380 SGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSVYGIAFHPDGSLAA-SCGLDALARV 437
SG + +TS D ++W+V T E +++ H+ + I+F+P SC D +V
Sbjct: 1839 SGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKV 1898
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
W T + L+ EG + +SP+G ++AT D + ++ +K L+ + H++
Sbjct: 1899 WSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDW 1958
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
++ F P + LV+G +D ++VW+ + K + L GH + + D++ I + S
Sbjct: 1959 VNFCTFSP-DSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISAS 2017
Query: 558 HDRWIKLWSTR 568
D +K+W +
Sbjct: 2018 FDGSVKVWDAQ 2028
Score = 286 (105.7 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 76/284 (26%), Positives = 140/284 (49%)
Query: 290 SGC-SYSHDGNLLATSSLSGVVKIWSMPR---LQKFSALKGHTERATDVTFSPVSNHVAT 345
+ C ++S LLA + V+++ + ++ + L GHT T +TFSP N +A+
Sbjct: 1786 ANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIAS 1845
Query: 346 SSADRTARLWN--TDGSLLNTFQGHLDRLARMAFHPSGKY-LGTTSFDKTWRLWDVDTGV 402
+S D ++WN T + + H D + ++F+P+ + L + S D + ++W T
Sbjct: 1846 TSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTS 1905
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
L EG + ++ + PDG A+ D V+ + + + L+GH V +FS
Sbjct: 1906 TTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFS 1965
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKV 522
P+ L +GG D R+W+++ +K L + HS+ I + F + Y +++ S+D +VKV
Sbjct: 1966 PDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKY-IISASFDGSVKV 2024
Query: 523 WSGRDFKLVKSLSGHEAKVTSLDIHPDEQS-IATVSHDRWIKLW 565
W + + SL H+ +++ + D I + S D IK W
Sbjct: 2025 WDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSW 2067
Score = 284 (105.0 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 74/289 (25%), Positives = 138/289 (47%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
+ C +S + + +++ V ++ + + S + H++ + S N++ T S
Sbjct: 1701 IKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSD 1760
Query: 349 DRTARLWN-TDGSLLNTFQGHLDRLAR-MAFHPSGKYLGTTSFDKTWRLWDVDTGV---E 403
D TA++W+ T G+ L F D A +AF P+ L + D T RL+DV + E
Sbjct: 1761 DATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYRE 1820
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALE-GHVKPVLGISFS 462
+ GH+R++ I F P G+L AS D L +VW+++T ++ +E H P+ ISF+
Sbjct: 1821 VAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFN 1880
Query: 463 P-NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
P N L + +D + ++W + +N I + P +G ++ T S D ++
Sbjct: 1881 PTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSP-DGKYIATVSRDCSIA 1939
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
V+ KL+ L GH V PD + + + D +++W+ + +
Sbjct: 1940 VYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQ 1988
Score = 278 (102.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 85/303 (28%), Positives = 139/303 (45%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWS-MPRLQKFSALKGHTERAT-------DV 334
S +P++ C +S DG L+A+SS G +KIW+ + K LK H A+
Sbjct: 1647 SAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAK-DRLK-HVIDASLSYGSIKSC 1704
Query: 335 TFSPVSNHVATSSADRTARLWNTDGSLLNTFQG-HLDRLARMAFHPSGKYLGTTSFDKTW 393
FS S + ++ L++ + L + G H + + G Y+ T S D T
Sbjct: 1705 KFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATA 1764
Query: 394 RLWDVDTGVEL--LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTG---RSILA 448
++W G +L L G + +AF P L A D R++D+ + R +
Sbjct: 1765 KVWSSTLGTQLTNFLIPGDCWANC-LAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAK 1823
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIP-AHSNLISQVKFEPQE 507
L GH + + I+FSP+G +A+ ED ++W+++ K+ Y I AH++ I+ + F P
Sbjct: 1824 LHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTN 1883
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
L++ S D + KVWS S G + PD + IATVS D I ++
Sbjct: 1884 ECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLC 1943
Query: 568 RNK 570
+K
Sbjct: 1944 SSK 1946
Score = 257 (95.5 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 62/270 (22%), Positives = 130/270 (48%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQ-KFSALKGHTERATDVTFSPVSN- 341
G R ++ ++S GNL+A++S ++K+W++ + +++ K H + ++F+P +
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNEC 1885
Query: 342 HVATSSADRTARLWN--TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ + S D + ++W+ T + L+T +G + + + P GKY+ T S D + ++
Sbjct: 1886 ELISCSDDYSTKVWSRFTTSTTLST-EGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCS 1944
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ L +GH+ V F PD S G D RVW+++T + +L L+GH +
Sbjct: 1945 SKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKA 2004
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
F+ + ++ + D + ++WD + + + H IS V + + S D
Sbjct: 2005 FFTKDQKYIISASFDGSVKVWDAQFGSEITSL-RHQTRISDVVSSSDASGRIFSSSDDGI 2063
Query: 520 VKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
+K W + +L+GH + + +P+
Sbjct: 2064 IKSWYPVAGSCLATLTGHSGPIKQVQFNPN 2093
Score = 256 (95.2 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 82/310 (26%), Positives = 146/310 (47%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G +S S+S DG LA+SS V +W + + K H+ FSP +N++
Sbjct: 1562 GHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNL 1621
Query: 344 ATSSA-DRTARLWNT-DGSLLNTFQG-HLDRLARMAFHPSGKYLGTTSFDKTWRLWD-VD 399
S A D + ++NT D ++ F+ H + + P G + ++S+D T ++W+ D
Sbjct: 1622 LMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFD 1681
Query: 400 TGVELLLQEGHSRSV-YG----IAFHPDGS--LAASCGLDALARVWDLRTGRSILALEGH 452
T + L+ S+ YG F + LA + D L ++D+ + + I + H
Sbjct: 1682 TIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVL--LFDVNSQKLISVMGNH 1739
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWD--LRKRKSLYVIPAHSNLISQVKFEPQEGYF 510
K V S S +G ++ TG +D T ++W L + + ++IP + + F P +
Sbjct: 1740 SKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDC-WANCLAFSPTQP-L 1797
Query: 511 LVTGSYDMTVKVW---SGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
L G+ D TV+++ S ++ V L GH +TS+ P IA+ S D IK+W+
Sbjct: 1798 LAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNV 1857
Query: 568 RNKGDEHAMD 577
+ E+ ++
Sbjct: 1858 QTHKAEYTIE 1867
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 67/295 (22%), Positives = 132/295 (44%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T +G + + C YS DG+++A++ ++ I+ + L GH+ + +FS
Sbjct: 1517 TITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDG 1576
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGK-YLGTTSFDKTWRLWDV 398
+A+SS D T +W+ G+ ++ F+ H + F P+ L + ++D + +++
Sbjct: 1577 KTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNT 1636
Query: 399 -DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD----LRTGRSILALEGHV 453
D + + HS+ V + PDG+L AS D ++W+ + R ++ +
Sbjct: 1637 SDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASL 1696
Query: 454 K--PVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFL 511
+ FS N + N ++D+ +K + V+ HS ++ +G ++
Sbjct: 1697 SYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLS-NDGNYI 1755
Query: 512 VTGSYDMTVKVWSGR-DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
VTGS D T KVWS +L L + L P + +A + D ++L+
Sbjct: 1756 VTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLF 1810
Score = 214 (80.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 76/292 (26%), Positives = 132/292 (45%)
Query: 293 SYSHDGNLLATSSLSGVV-KIW----SMPRLQKF--SALKGHTERATDVTFSPVSNHVAT 345
SY H +A S G+ K W + P+++ + G + AT +S + +A+
Sbjct: 1483 SYCHK---VAASESGGLKHKTWIEWLNKPQIKDSCKQTITGLEDGATACCYSRDGSMIAS 1539
Query: 346 SSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
+ D ++ ++GS L T GH + ++ +F GK L ++S+D T +WD+ G ++
Sbjct: 1540 AGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQI 1599
Query: 405 LLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLRTGRSILA--LEGHVKPVLGISF 461
+ HSR+V F P + L SC D+ +++ + ++I H KPV +
Sbjct: 1600 HQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNT-SDKNIFRNFRSAHSKPVNSCCW 1658
Query: 462 SPNGYHLATGGEDNTCRIWD----LRKRKSLYVIPAHSNL--ISQVKFEPQEGYFLVTGS 515
SP+G +A+ D T +IW+ + K + +VI A + I KF L T +
Sbjct: 1659 SPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILAT-T 1717
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
V ++ KL+ + H V + D I T S D K+WS+
Sbjct: 1718 MKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSS 1769
Score = 206 (77.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 59/229 (25%), Positives = 94/229 (41%)
Query: 282 ESGDDRPLSGCSYSHDGNL-LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
E + P++ S++ L + S K+WS + +G T +SP
Sbjct: 1867 EKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDG 1926
Query: 341 NHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
++AT S D + ++ LL +GH D + F P K L + +D R+W++
Sbjct: 1927 KYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIK 1986
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
T ELL +GHS S+ F D S D +VWD + G I +L + +
Sbjct: 1987 TQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVV 2046
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
S S + + +D + W L + HS I QV+F P G
Sbjct: 2047 SSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSG 2095
Score = 128 (50.1 bits), Expect = 0.00040, P = 0.00040
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 337 SPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
+PV+ +A+SS D T +LW + + T H + + F GKY+ T D +W
Sbjct: 2114 APVTLSIASSSDDGTVKLWEFNSATATT-SAHKGSINQCVFSKDGKYVATCGQDCVLNIW 2172
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASC--G-LDALARVWDL-----RTGRSILA 448
D T + L S V +F+ G L G L+ ++ W +T I
Sbjct: 2173 DAKTHINLKTMIFES-PVTTCSFNRSGVLFIGLQDGTLEVYSKDWKTVLHKEKTNGKITR 2231
Query: 449 LEGHVKPVLGISF--SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHS--NLISQVKFE 504
H P L I SP+ L C +L Y P S + + V+F
Sbjct: 2232 SSAH--PSLNIQSTESPDYIDLFAFSTWTNCV--NLLNCSEKYFDPIVSFDDWVESVEFS 2287
Query: 505 PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKL 564
G L GS VK++S + K V + + VTSL P+++ +A + D ++L
Sbjct: 2288 TS-GDLLAAGSRTKQVKIFSPLNDKPVTHQTS-SSYVTSLSFSPNDKYLAIGTFDGTVEL 2345
Score = 127 (49.8 bits), Expect = 0.00051, P = 0.00051
Identities = 62/279 (22%), Positives = 117/279 (41%)
Query: 301 LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS 360
+A+SS G VK+W + H FS +VAT D +W+
Sbjct: 2120 IASSSDDGTVKLWEFNSAT--ATTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTH 2177
Query: 361 L-LNTFQGHLDRLARMAFHPSGK-YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
+ L T + +F+ SG ++G D T ++ D L ++ + + A
Sbjct: 2178 INLKTMIFE-SPVTTCSFNRSGVLFIGLQ--DGTLEVYSKDWKTVLHKEKTNGKITRSSA 2234
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILAL----EGHVKPVLG-------ISFSPNGYH 467
HP ++ ++ D + ++ T + + L E + P++ + FS +G
Sbjct: 2235 -HPSLNIQSTESPDYID-LFAFSTWTNCVNLLNCSEKYFDPIVSFDDWVESVEFSTSGDL 2292
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
LA G +I+ K + S+ ++ + F P + Y L G++D TV++
Sbjct: 2293 LAAGSRTKQVKIFSPLNDKPV-THQTSSSYVTSLSFSPNDKY-LAIGTFDGTVELLDIAS 2350
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
KL + L+ + +TSL D + +VS+DR + +W+
Sbjct: 2351 GKLRRILTTQVSSITSLKFL-DSTRLVSVSNDRSLIVWN 2388
Score = 110 (43.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/147 (20%), Positives = 67/147 (45%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
C++S D L + +++W++ ++ LKGH+ F+ ++ ++S D +
Sbjct: 1962 CTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGS 2021
Query: 352 ARLWNTD-GSLLNTFQGHLDRLARM--AFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
++W+ GS + + + H R++ + + SG+ ++S D + W G L
Sbjct: 2022 VKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIF-SSSDDGIIKSWYPVAGSCLATLT 2079
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALA 435
GHS + + F+P+ S + +
Sbjct: 2080 GHSGPIKQVQFNPNSGGGGSSSFSSFS 2106
Score = 108 (43.1 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDV-TFSPVSNH 342
G + ++ D + ++S G VK+W + ++L+ H R +DV + S S
Sbjct: 1996 GHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGR 2054
Query: 343 VATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSF 389
+ +SS D + W GS L T GH + ++ F+P+ G++SF
Sbjct: 2055 IFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSF 2102
Score = 108 (43.1 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 45/195 (23%), Positives = 80/195 (41%)
Query: 384 LGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTG 443
+ ++S D T +LW+ ++ H S+ F DG A+CG D + +WD +T
Sbjct: 2120 IASSSDDGTVKLWEFNSATATT--SAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTH 2177
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRI----WD--LRKRKSLYVIP---AH 494
++ + PV SF+ +G L G +D T + W L K K+ I AH
Sbjct: 2178 INLKTMIFE-SPVTTCSFNRSGV-LFIGLQDGTLEVYSKDWKTVLHKEKTNGKITRSSAH 2235
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
+L Q P ++ V + + + K + + V S++ +A
Sbjct: 2236 PSLNIQSTESPDYIDLFAFSTWTNCVNLLNCSE-KYFDPIVSFDDWVESVEFSTSGDLLA 2294
Query: 555 TVSHDRWIKLWSTRN 569
S + +K++S N
Sbjct: 2295 AGSRTKQVKIFSPLN 2309
Score = 76 (31.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
S +P +A+ +D T ++W+ + AH I+Q F ++G ++ T D
Sbjct: 2112 SDAPVTLSIASSSDDGTVKLWEFNSATA--TTSAHKGSINQCVFS-KDGKYVATCGQDCV 2168
Query: 520 VKVWSGRDFKLVKSLSGHEAKVTS 543
+ +W + +K++ E+ VT+
Sbjct: 2169 LNIWDAKTHINLKTMI-FESPVTT 2191
Score = 42 (19.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 533 SLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
S S + +S D P SIA+ S D +KLW
Sbjct: 2101 SFSSFSSFSSSSDA-PVTLSIASSSDDGTVKLW 2132
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 303 (111.7 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 74/238 (31%), Positives = 114/238 (47%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSA 348
LS C + G+ LATSS VK+W + + +GH+ T+ N VA+SS
Sbjct: 397 LSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSL 456
Query: 349 DRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV-ELLL 406
D+T+++W+ + T GH D + + F P L T+S DKT +WD TG+ E L
Sbjct: 457 DKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSL 516
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH S+ F P G + ASC + ++WD R I++++ P ++F +G
Sbjct: 517 Y-GHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGR 575
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
LA + + DL K ++ + H N V F +G L +G D TV+ WS
Sbjct: 576 VLAQASGNGVIHLLDL-KSGEIHKLMGHENEAHTVVFS-HDGEILFSGGSDGTVRTWS 631
Score = 268 (99.4 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 73/231 (31%), Positives = 110/231 (47%)
Query: 353 RLWNTDG----SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
RLW G ++L T GH D L+ FHPSG L T+S D T +LWD+ G +L E
Sbjct: 374 RLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFE 433
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GHSR+V+ +H G+ AS LD +++WD+ + R L GH V I F P L
Sbjct: 434 GHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTL 493
Query: 469 ATGGEDNTCRIWDLRK---RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSG 525
T D T IWD R +SLY H + I+ F+P+ G+ + + K+W
Sbjct: 494 LTSSADKTLSIWDARTGICEQSLY---GHMHSINDAIFDPR-GHMIASCDACGVTKLWDF 549
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
R + S+ + ++ + +A S + I L ++ G+ H +
Sbjct: 550 RKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKS-GEIHKL 599
Score = 228 (85.3 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 66/247 (26%), Positives = 109/247 (44%)
Query: 324 LKGHTERAT-DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGK 382
+KG+T+ + + P N + + A+ D L N F+ H ++ ++ P
Sbjct: 309 MKGNTKDSEFPIDMQPNPNLNVSKESLSPAKF---DYKLKNIFRLHELPVSCVSMQPHKD 365
Query: 383 YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLR 441
L + D+ W++ + LL GH+ + FHP G LA S G D ++WDL
Sbjct: 366 ILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSG-DTTVKLWDLC 424
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQV 501
G IL EGH + V ++ G +A+ D T +IWD+ + + H++ ++ +
Sbjct: 425 KGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSI 484
Query: 502 KFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRW 561
+F P L+T S D T+ +W R +SL GH + P IA+
Sbjct: 485 EFFPFSNT-LLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGV 543
Query: 562 IKLWSTR 568
KLW R
Sbjct: 544 TKLWDFR 550
Score = 227 (85.0 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 61/206 (29%), Positives = 94/206 (45%)
Query: 279 DC--TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTF 336
DC T G R + C++ GN +A+SSL KIW + + L GHT+ + F
Sbjct: 427 DCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEF 486
Query: 337 SPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRL 395
P SN + TSSAD+T +W+ G + GH+ + F P G + + +L
Sbjct: 487 FPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKL 546
Query: 396 WDVDTGVELL-LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK 454
WD + ++ + G S + F G + A + + + DL++G I L GH
Sbjct: 547 WDFRKLLPIVSIDIGPSPG-NEVNFDSSGRVLAQASGNGVIHLLDLKSGE-IHKLMGHEN 604
Query: 455 PVLGISFSPNGYHLATGGEDNTCRIW 480
+ FS +G L +GG D T R W
Sbjct: 605 EAHTVVFSHDGEILFSGGSDGTVRTW 630
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 281 (104.0 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 75/292 (25%), Positives = 143/292 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G LA+S ++ +W++ + ++ LKGH+ ++ ++ +
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGS 112
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPS--GKYLGTT-SFDKTWRLWD 397
+ ++S D+T +W+++ G + +GH F P+ G L T S D T +LWD
Sbjct: 113 LLFSASTDKTVCVWDSETGERVKRLKGHTS-FVNSCF-PARRGPQLACTGSDDGTVKLWD 170
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL 457
+ + + ++ V + F+ S G+D +VWDLR + I +++GH V
Sbjct: 171 IRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVT 229
Query: 458 GISFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEG 508
G+S S +G +L + DN+ R+WD+R K + + + H+ NL+ + + +G
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSA-DG 287
Query: 509 YFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDR 560
+ GS D V +W ++V L GH V + HP+E + + S D+
Sbjct: 288 SKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDK 339
Score = 278 (102.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 72/258 (27%), Positives = 119/258 (46%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P +A+S DR +WN G N T +GH + + ++ G
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD-ALARVWDL 440
L + S DKT +WD +TG + +GH+ V G A G D ++WD+
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ 500
R S+ + + VL ++F+ + +GG DN ++WDLR+ K +Y + H + ++
Sbjct: 172 RKKASVHTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 501 VKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDEQS 552
+ +G +L++ S D +V+VW R F + VK G+ E + D
Sbjct: 231 LSLSA-DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSK 289
Query: 553 IATVSHDRWIKLWSTRNK 570
IA S DR++ +W T +
Sbjct: 290 IAAGSADRFVYIWDTTTR 307
Score = 191 (72.3 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 50/205 (24%), Positives = 94/205 (45%)
Query: 289 LSGCSYSHDGNLLA-TSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
++ C + G LA T S G VK+W + + + +T + VTF+ S+ + +
Sbjct: 144 VNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGG 202
Query: 348 ADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV------DT 400
D ++W+ L+ + QGH D + ++ G YL + S D + R+WD+ +
Sbjct: 203 IDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKER 262
Query: 401 GVELLLQEGHS--RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
V++ H+ +++ ++ DGS A+ D +WD T R + L GH V
Sbjct: 263 CVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNE 322
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLR 483
++F P + +G D I +++
Sbjct: 323 VAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 179 (68.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTG-RSILALEGHVKPVLGISFS 462
++L GH VY FHP+G+ AS G D L +W++ + L+GH V+ + ++
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ F + G L TGS D TVK
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC-FPARRGPQLACTGSDDGTVK 167
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R V + + +V S+ + I + D IK+W R NK
Sbjct: 168 LWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNK 216
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/131 (32%), Positives = 57/131 (43%)
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYV-IPAHSNLISQVKFE 504
I+ L GH V F PNG LA+ G D +W++ Y + HS + ++ +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 505 PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTS-LDIHPDEQSIATVSHDRWIK 563
+G L + S D TV VW + VK L GH + V S Q T S D +K
Sbjct: 109 T-DGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 564 LWSTRNKGDEH 574
LW R K H
Sbjct: 168 LWDIRKKASVH 178
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 281 (104.0 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 85/282 (30%), Positives = 125/282 (44%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+S D + +SS G V +W K AL T FSP S +A D
Sbjct: 76 WSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCS 135
Query: 354 ---LWNTDGSLLNTFQ--GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE 408
L D + Q H ++ F S + T S D T +WDV++G +
Sbjct: 136 VVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFH 195
Query: 409 GHSRSVYGIAFHP-D-GSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH+ V+ I D G+ S G D + VWD+R+G+ + + EGH + + F PNG
Sbjct: 196 GHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGD 255
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNL--ISQVKFEPQEGYFLVTGSYDMTVKVWS 524
ATG +D TCR++DLR + + V S L ++ V F G L G D V VW
Sbjct: 256 AFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFS-LSGRILFAGYGDYRVGVWD 314
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
L GHE +++ L PD ++ + S D I++W+
Sbjct: 315 SLKCARHSVLYGHENRISCLRTSPDGTAVCSASWDCTIRIWA 356
Score = 195 (73.7 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 60/199 (30%), Positives = 90/199 (45%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTER--ATDVTFSPVSNHVATS 346
+S C++ NL+ T S IW + Q GHT A DV N ++
Sbjct: 159 MSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISA 218
Query: 347 SADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELL 405
AD+ + +W+ G + +F+GH + + FHP+G T S D T RL+D+ ++
Sbjct: 219 GADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFDLRADRQVC 278
Query: 406 LQEGHSR--SVYGIAFHPDGS-LAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISF 461
+ E S V G+ F G L A G D VWD L+ R + L GH + +
Sbjct: 279 VYEKESILFPVNGVDFSLSGRILFAGYG-DYRVGVWDSLKCARHSV-LYGHENRISCLRT 336
Query: 462 SPNGYHLATGGEDNTCRIW 480
SP+G + + D T RIW
Sbjct: 337 SPDGTAVCSASWDCTIRIW 355
Score = 152 (58.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 51/209 (24%), Positives = 89/209 (42%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD-VDTGVELLLQEGHSRSVYGIAFHPDGS 424
+GH+ ++ M + +++ ++S D +WD T E L + V AF P
Sbjct: 65 KGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMP-TTWVMACAFSPSSQ 123
Query: 425 LAASCGLDALARVWDLRTGRSILA----LEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
+ A GLD V L I+ + H + +F + + TG D+TC IW
Sbjct: 124 MIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIW 183
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEA 539
D+ + + H+ + + + G ++ D VW R + V+S GHEA
Sbjct: 184 DVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEA 243
Query: 540 KVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ ++ HP+ + AT S D +L+ R
Sbjct: 244 DINTVRFHPNGDAFATGSDDATCRLFDLR 272
Score = 135 (52.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 48/212 (22%), Positives = 83/212 (39%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQG---HLDRLARMAFHPS 380
LKGH + + +S H+ +SS D +W DG N + AF PS
Sbjct: 64 LKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVW--DGFTTNKEHALTMPTTWVMACAFSPS 121
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEG----HSRSVYGIAFHPDGSLAASCGLDALAR 436
+ + D + + +++ ++ H+ + F +L + D+
Sbjct: 122 SQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCA 181
Query: 437 VWDLRTGRSILALEGHVKPVLGISFSP--NGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
+WD+ +G+ I GH V I G + G D +WD+R + + H
Sbjct: 182 IWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGH 241
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
I+ V+F P F TGS D T +++ R
Sbjct: 242 EADINTVRFHPNGDAF-ATGSDDATCRLFDLR 272
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 290 (107.1 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 74/260 (28%), Positives = 123/260 (47%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LWN G N T +GH + + ++ G
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 179
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R +I + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 180 DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 238
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + VK G+ E + PD
Sbjct: 239 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 297
Query: 551 QSIATVSHDRWIKLWSTRNK 570
IA S DR++ +W T ++
Sbjct: 298 SKIAAGSADRFVYVWDTTSR 317
Score = 288 (106.4 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 74/288 (25%), Positives = 136/288 (47%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +W++ ++ LKGH+ ++ ++ +
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGS 122
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 183 KKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 241
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 299
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
+ GS D V VW +++ L GH + + HPDE I T H
Sbjct: 300 IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETGFH 347
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W++ A L+GH V+ + ++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 177
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R +++ + +V ++ + I + D IK+W R NK
Sbjct: 178 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 35/142 (24%), Positives = 64/142 (45%)
Query: 256 DNPDESIDDEIDYALK--KVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIW 313
D D+ I ID +K + L T G ++G S S +G+ L ++++ V++W
Sbjct: 203 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Query: 314 SM----PRLQKFSALKGHT----ERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNT 364
+ P+ + +G+ + ++SP + +A SADR +W+T +L
Sbjct: 263 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 322
Query: 365 FQGHLDRLARMAFHPSGKYLGT 386
GH + +AFHP + T
Sbjct: 323 LPGHAGSINEVAFHPDEPIIET 344
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 297 (109.6 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 83/291 (28%), Positives = 140/291 (48%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
SG + C++S DG + V+IW + LKGHT V +SP S
Sbjct: 137 SGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKK 196
Query: 343 VATSSADRTARLW--NTDGSLLNTFQGHLDRLARMA---FH--PSGKYLGTTSFDKTWRL 395
+AT+ + R+W T L +T +GH + ++ FH P L ++S D T R+
Sbjct: 197 IATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRI 256
Query: 396 WDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKP 455
WD ++ L+ GH+ SV + + +G L S D RV++ GR + L+GH
Sbjct: 257 WDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHW 315
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V ++ + + Y L TG D+T + +D + + ++++ + K + E L++GS
Sbjct: 316 VNTLALNTD-YVLRTGSYDHTGKEYDTLEEAQRVALERYNDV--KAKSKGME--ILISGS 370
Query: 516 YDMTVKVWSGRDFKL-VKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
D TV +W+ K + L+GH+ + + PD + A+ S D+ IKLW
Sbjct: 371 DDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLW 421
Score = 284 (105.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 78/269 (28%), Positives = 130/269 (48%)
Query: 301 LATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DG 359
LA+SS ++IW + +L GHT T + + + + S DRT R++NT DG
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGG-EGLIYSGSQDRTVRVFNTTDG 303
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAF 419
L+ GH + +A + + L T S+D T + +D + + E ++ +
Sbjct: 304 RLVRVLDGHAHWVNTLALN-TDYVLRTGSYDHTGKEYDTLEEAQRVALERYN----DVKA 358
Query: 420 HPDGSLAASCGLDALARV-WDLR-TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
G G D + W+ T SI L GH + + +SFSP+G + A+ D +
Sbjct: 359 KSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSI 418
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
++WD + K L H + QV + Y LV+GS D T+K+W + K+ K L GH
Sbjct: 419 KLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRY-LVSGSKDSTLKIWDIKTKKMEKELPGH 477
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+V ++D PD +A+ S DR +++W+
Sbjct: 478 ADEVYTVDWSPDGDRVASGSKDRLLRIWT 506
Score = 278 (102.9 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 76/260 (29%), Positives = 129/260 (49%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKY 383
LK H E +D T +S + + R + S+ GH + + AF P GK
Sbjct: 101 LKNHLEGLSDET--TLSIYYQPQAVFRVRPVTRCASSM----SGHTEAVLNCAFSPDGKG 154
Query: 384 LGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTG 443
+ D T R+WD+ T +GH+ V +A+ PD A+ G++ R+W +TG
Sbjct: 155 FVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTG 214
Query: 444 RSI-LALEGHVKPVLGISF-----SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
+ + L+GH K + G+S+ +P LA+ +D+T RIWD K+L + H+
Sbjct: 215 KQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMS 274
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
++ +K+ EG + +GS D TV+V++ D +LV+ L GH V +L ++ D + T S
Sbjct: 275 VTCLKWGG-EG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTD-YVLRTGS 331
Query: 558 HDRWIKLWSTRNKGDEHAMD 577
+D K + T + A++
Sbjct: 332 YDHTGKEYDTLEEAQRVALE 351
Score = 252 (93.8 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 79/289 (27%), Positives = 137/289 (47%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKF--SALKGHTERATDVTFSPVS-N----HVAT 345
++S D +AT+ + G ++IW P+ K S LKGHT+ T +++ P N +A+
Sbjct: 189 AWSPDSKKIATAGMEGDIRIWC-PQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLAS 247
Query: 346 SSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPSGK-YLGTTSFDKTWRLWDVDTGVE 403
SS D T R+W+T+ L + GH + + + G Y G S D+T R+++ G
Sbjct: 248 SSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSG--SQDRTVRVFNTTDGRL 305
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
+ + +GH+ V +A + D L D + +D +ALE + +
Sbjct: 306 VRVLDGHAHWVNTLALNTDYVLRTG-SYDHTGKEYDTLEEAQRVALERYND----VKAKS 360
Query: 464 NGYH-LATGGEDNTCRIWDLRKRK-SLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
G L +G +D T +W+ K S+ + H LI+ V F P YF + S+D ++K
Sbjct: 361 KGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYF-ASASFDKSIK 419
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
+W G+ K + + GH V + D + + + S D +K+W + K
Sbjct: 420 LWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK 468
Score = 240 (89.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 57/207 (27%), Positives = 104/207 (50%)
Query: 322 SALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSL-LNTFQGHLDRLARMAFHPS 380
S++ GHTE + FSP + D T R+W+ S +T +GH + + ++A+ P
Sbjct: 134 SSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPD 193
Query: 381 GKYLGTTSFDKTWRLWDVDTGVEL-LLQEGHSRSVYGIA---FH--PDGSLAASCGLDAL 434
K + T + R+W TG +L +GH++ + G++ FH P AS D+
Sbjct: 194 SKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDST 253
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
R+WD + +++++L GH V + + G + +G +D T R+++ + + V+ H
Sbjct: 254 IRIWDTESCKNLMSLSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTDGRLVRVLDGH 312
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVK 521
++ ++ + Y L TGSYD T K
Sbjct: 313 AHWVNTLALNTD--YVLRTGSYDHTGK 337
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G + ++ S+S DG A++S +K+W + +GH V +S S +
Sbjct: 391 TGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRY 450
Query: 343 VATSSADRTARLWNTDGSLLNT-FQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
+ + S D T ++W+ + GH D + + + P G + + S D+ R+W V
Sbjct: 451 LVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 298 (110.0 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 62/188 (32%), Positives = 92/188 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT V + + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G+++ + S D +LWD+ + GHS++V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F PN Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 477 CRIWDLRK 484
R WDL K
Sbjct: 213 IRFWDLEK 220
Score = 275 (101.9 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 59/224 (26%), Positives = 103/224 (45%)
Query: 320 KFSALKGHTERATDVTFSPVSNHV-ATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
K + H + + S + AT D LW+ + + + + GH + +
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
+ + + S + R+WD++ L GH ++ + FHP G AS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+R + GH + V + FSP+G LA+ +D+T ++WDL K + P H+
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKV 541
++ V+F P E Y L +GS D T++ W F++V + G V
Sbjct: 192 VNVVEFHPNE-YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 258 (95.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
SG+ L T D LW ++ ++ GH+ V + + L + RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G +A+G +D ++WD+R++ ++ HS +
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G +L + + D TVK+W K++ GH V ++ HP+E +A+ S D
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 560 RWIKLW 565
R I+ W
Sbjct: 211 RTIRFW 216
Score = 235 (87.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 78/286 (27%), Positives = 121/286 (42%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ + L+ S SG +++W + + L GH + F P
Sbjct: 60 TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++GH + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV---- 456
G + GH+ V + FHP+ L AS D R WDL + + +EG PV
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAG 238
Query: 457 ---LGISFSPN--GYHLATG---GEDNTCRIWD-LRKRKSLYVIPA-HSNLISQVKFEPQ 506
+G+S P G G +C ++ L ++ P HS L V F P
Sbjct: 239 SWVVGLSPPPKVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNP- 297
Query: 507 EGYFLVTGSYD-MTVKVWSG-RDFKLVKSLSGHEAKVTSLDIHPDE 550
+G L +G D + V W R F +V G KV L + D+
Sbjct: 298 DGCCLYSGCQDSLRVYGWEPERCFDVVLVSWG---KVADLAVCNDQ 340
Score = 192 (72.6 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 46/136 (33%), Positives = 73/136 (53%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG +G LATGG+D +W + K + + H++
Sbjct: 11 WKLQ---EIVAHASNVSSLVLG---KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 497 LISQVKFE-PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIAT 555
+ V+ P+E +V GS +++VW K++++L GH+A + SLD HP + +A+
Sbjct: 65 PVESVRLNTPEE--LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 556 VSHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 123 GSQDTNIKLWDIRRKG 138
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 278 (102.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 73/258 (28%), Positives = 111/258 (43%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSG 381
L+GH F P + +S DR +W D + GH + F P G
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDL 440
++ T S DKT WD+ TG +GH V + G L S D ++WD
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ 500
R + LE + V + F G + +GG DN +IWD+RK+ L+ + HS+ I+
Sbjct: 171 RKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITG 229
Query: 501 VKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDEQS 552
+ P EG F++T + D T++VW R + + VK GH E + P
Sbjct: 230 MSLSP-EGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDK 288
Query: 553 IATVSHDRWIKLWSTRNK 570
I + S DR + +W +
Sbjct: 289 ITSGSADRHVYIWDVNTR 306
Score = 276 (102.2 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 79/321 (24%), Positives = 142/321 (44%)
Query: 257 NPDESIDDEIDYALKKVESLYLDCTE-SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM 315
N D+++ ++ +++ +L + G + + + +G LL +S + IW +
Sbjct: 28 NRDKAL---LESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQV 84
Query: 316 PR-LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLA 373
+ A+ GH+ + F+P +H+ T S D+T W+ G F+GH + +
Sbjct: 85 YEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVN 144
Query: 374 RMAFHPSGKYLGTT-SFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
+ G+ L + S D+T ++WD E + V + F G S G+D
Sbjct: 145 SVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGID 203
Query: 433 ALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK----RKSL 488
++WD+R + L GH + G+S SP G + T DNT R+WD+R + +
Sbjct: 204 NEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCV 263
Query: 489 YVIPAHS-----NLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTS 543
V H NL+ + + P + +GS D V +W +++ L GH V +
Sbjct: 264 KVFQGHQHNFEKNLL-RCAWSPGSDK-ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNA 321
Query: 544 LDIHPDEQSIATVSHDRWIKL 564
+D P E I + S D+ + L
Sbjct: 322 VDFSPKEPLILSGSSDKTLYL 342
Score = 178 (67.7 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 48/192 (25%), Positives = 83/192 (43%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-D 358
LL + S +KIW + L+ + T V F V + D ++W+
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRK 213
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT---GVELL-LQEGHS--- 411
++L+ +GH D + M+ P G ++ T + D T R+WDV G + + +GH
Sbjct: 214 QAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNF 273
Query: 412 -RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+++ A+ P S D +WD+ T R + L GH V + FSP + +
Sbjct: 274 EKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILS 333
Query: 471 GGEDNTCRIWDL 482
G D T + ++
Sbjct: 334 GSSDKTLYLGEI 345
Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 446 ILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR-KSLYVIPAHSNLISQVKFE 504
I+ LEGH + F P G L + G D IW + + +++ + HS + + F
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 505 PQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD-IHPDEQSIATVSHDRWIK 563
P +G + T S D T+ W + + GH V S+ +Q + + S DR IK
Sbjct: 108 P-DGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIK 166
Query: 564 LWSTRNKGDEHAMD 577
+W R K H ++
Sbjct: 167 IWDARKKHAAHTLE 180
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 278 (102.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 68/227 (29%), Positives = 114/227 (50%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW-DVDTG---VELLLQEGHSRSVY 415
+LL GH R+ +HP L T DKT R+W D TG + +L +GH+R++
Sbjct: 5 TLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIR 64
Query: 416 GIAFHPDGSLAASCGLDALARVWDLRTGR--SILALEGHVKPVLGISFSPNGYHLATGGE 473
+A+ P G AS DA +WD R+G LEGH V +S+S +G LAT
Sbjct: 65 DVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSR 124
Query: 474 DNTCRIWDLRKR---KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW----SGR 526
D + IW++ + + V+ HS + +V++ P E L + SYD T++++ +
Sbjct: 125 DKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDV-LASASYDNTIQLYREDLADS 183
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
D+ +L+ H++ V S+ +A+ S D+ +++W G+E
Sbjct: 184 DWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNE 230
Score = 218 (81.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 62/223 (27%), Positives = 101/223 (45%)
Query: 315 MPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS---LLNTF--QGHL 369
M +L L GH R + P +AT D+T R+W DG+ + T GH
Sbjct: 1 MGKLTLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHT 60
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VEL-LLQEGHSRSVYGIAFHPDGSLAA 427
+ +A+ P G++L + SFD T +WD +G E EGH V +++ G+L A
Sbjct: 61 RTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLA 120
Query: 428 SCGLDALARVWDLRTG---RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW--DL 482
+C D +W++ L H + V + + PN LA+ DNT +++ DL
Sbjct: 121 TCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDL 180
Query: 483 RKR--KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
S + +H + + + F+ G L + S D TV++W
Sbjct: 181 ADSDWSSFDTLASHDSTVWSIAFDAS-GSRLASCSDDQTVRIW 222
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 62/217 (28%), Positives = 99/217 (45%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKF---SALK-GHTERATD 333
L C SG + G + +LAT ++IW+ ++ + L GHT D
Sbjct: 7 LQCL-SGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRD 65
Query: 334 VTFSPVSNHVATSSADRTARLWNT-DGSL-LN-TFQGHLDRLARMAFHPSGKYLGTTSFD 390
V +SP +A++S D T +W+ G N T +GH + + +++ SG L T S D
Sbjct: 66 VAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRD 125
Query: 391 KTWRLWDVDTGVEL---LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW--DLRTG-- 443
K+ +W+V E + HS+ V + +HP+ + AS D +++ DL
Sbjct: 126 KSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDW 185
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
S L H V I+F +G LA+ +D T RIW
Sbjct: 186 SSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIW 222
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 68/263 (25%), Positives = 110/263 (41%)
Query: 279 DCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKF---SALKGHTERATDVT 335
+ T G + + S+S G LLAT S V IW + + ++ + L H++ V
Sbjct: 97 NATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVE 156
Query: 336 FSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTW-R 394
+ P + +A++S D T +L+ D L ++ D LA H S + + +FD + R
Sbjct: 157 WHPNEDVLASASYDNTIQLYRED--LADSDWSSFDTLAS---HDSTVW--SIAFDASGSR 209
Query: 395 LWDV-DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEG-H 452
L D + QE + +G+A PDG VW + + L G H
Sbjct: 210 LASCSDDQTVRIWQEYKPGNEFGVAC-PDGKTP----------VW-----KCVCTLSGFH 253
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIW-----DLRKRKSLYVIP---AHSNLISQVKFE 504
+ V IS+ +AT D+ RI+ + ++ AHS + V++
Sbjct: 254 SRAVYDISWCKKTGLIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWS 313
Query: 505 PQEGYFLVTGSYDMTVKVWSGRD 527
P LVT S D VK+W D
Sbjct: 314 PTVAGLLVTTSDDGDVKLWKFED 336
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 303 (111.7 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 95/320 (29%), Positives = 147/320 (45%)
Query: 268 YALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLAT---SSLSGVVKIWSMPR--LQKFS 322
+ + KV YL E G +G ++S D +A S S + ++ LQK
Sbjct: 712 FGISKVNYTYLQPPEQGGYGLHAG-AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKI- 769
Query: 323 ALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSG 381
LKGH+ + + FS S + T S D T RLWNT G L TF GH + +A G
Sbjct: 770 -LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDG 828
Query: 382 KYLGTTSFDKTWRLWDVDTGVELL--LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
+ + + S + +LWD TG +LL L G + SV AF PD A+ D +WD
Sbjct: 829 RQIVSGSIEAV-KLWDAATG-DLLKTLASGFAGSV---AFSPDSRQIAAGFKDGKIFIWD 883
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
G LE H ++ I+FSP+ L T D+T + WD+ + HS ++
Sbjct: 884 A-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAV-GHSKHVT 941
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
+ P +G + +GS D T+K+W L K+L+GH V + D + I + S +
Sbjct: 942 TMVLSP-DGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE 1000
Query: 560 RWIKLWSTRNKGDEHAMDVD 579
+K+W +++ + D
Sbjct: 1001 A-VKIWDAATGKVQNSFESD 1019
Score = 252 (93.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 74/269 (27%), Positives = 119/269 (44%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L+ T G + + S DG + + S+ V K+W L A V FS
Sbjct: 808 LEKTFVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDLLKTLASGF--AGSVAFS 864
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
P S +A D +W+ G+L T + H + +AF P K L T S D T + WD
Sbjct: 865 PDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD 924
Query: 398 VDTGVELLLQE--GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKP 455
+ G +QE GHS+ V + PDG + AS D ++WD TG L GH+
Sbjct: 925 ITIGG---VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDT 981
Query: 456 VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGS 515
V + FS + + + + +IWD K + ++ + V P +G + +G
Sbjct: 982 VEKVVFSLDNRQIVSCSSE-AVKIWDAATGKVQNSFES-DDVFTIVAVSP-DGKHIASGH 1038
Query: 516 YDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ +K+W L+K+++G+ +K SL
Sbjct: 1039 CNGRIKLWDMATGSLLKTMAGYRSKFDSL 1067
Score = 224 (83.9 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMP-RLQKFSALKGHTERATDVTFSPVSNHVATSSADRT 351
++S D +A G + IW LQK L+ H + FSP + T S D T
Sbjct: 862 AFSPDSRQIAAGFKDGKIFIWDAAGTLQK--TLERHPGAIMSIAFSPDVKQLVTCSTDST 919
Query: 352 ARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
+ W+ T G + GH + M P GK + + S DKT +LWD TG GH
Sbjct: 920 IKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGH 978
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+V + F D SC +A+ ++WD TG+ + E + ++ SP+G H+A+
Sbjct: 979 LDTVEKVVFSLDNRQIVSCSSEAV-KIWDAATGKVQNSFESDDVFTI-VAVSPDGKHIAS 1036
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAH----SNLISQVKFEPQ--EGYFLVTGSYDMTVKVWS 524
G + ++WD+ L + + +L++ F+ Q E F + +T V+S
Sbjct: 1037 GHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIF----NTQITGLVFS 1092
Query: 525 GRDFKLVKSLSGHEA 539
D KL+ S S A
Sbjct: 1093 P-DAKLILSTSTDRA 1106
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 74/291 (25%), Positives = 125/291 (42%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S D L T S +K W + + GH++ T + SP +A+ SAD+T
Sbjct: 903 AFSPDVKQLVTCSTDSTIKRWDIT-IGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTI 961
Query: 353 RLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
+LW+ G L T GHLD + ++ F + + + S + ++WD TG + S
Sbjct: 962 KLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAV-KIWDAATGK--VQNSFES 1018
Query: 412 RSVYGI-AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
V+ I A PDG AS + ++WD+ TG + + G+ F L T
Sbjct: 1019 DDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRS-----KFDS----LVT 1069
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
++D++ +++++ + I+ + F P L T S D +K+W L
Sbjct: 1070 ------TEVFDIQLQEAIF-----NTQITGLVFSPDAKLILST-STDRAIKLWDAATGDL 1117
Query: 531 VKSL---------------SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
K L SG+ + S+ D Q IA S D+ I++WS
Sbjct: 1118 QKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWS 1168
Score = 134 (52.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 55/208 (26%), Positives = 86/208 (41%)
Query: 294 YSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTAR 353
+S D + + S S VKIW + ++ + + T V SP H+A+ + +
Sbjct: 987 FSLDNRQIVSCS-SEAVKIWDAATGKVQNSFESD-DVFTIVAVSPDGKHIASGHCNGRIK 1044
Query: 354 LWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG-HS 411
LW+ GSLL T G+ R F L TT ++D+ LQE +
Sbjct: 1045 LWDMATGSLLKTMAGY-----RSKFDS----LVTTE------VFDIQ------LQEAIFN 1083
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGR----------SILA-----LEGHVKPV 456
+ G+ F PD L S D ++WD TG SI+ G+ +
Sbjct: 1084 TQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWI 1143
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRK 484
++FS +G H+A D T R+W + K
Sbjct: 1144 FSVAFSSDGQHIAAASADKTIRVWSIEK 1171
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 39/131 (29%), Positives = 54/131 (41%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSVYGI-- 417
++ T GH + + R+AF P GK + + S +LWD TG ++ L H + Y I
Sbjct: 612 MIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQ 671
Query: 418 ------AFHPDGSLAASCGLDALARVWDLRTG-RSILALEGHVKPVLGISFSP---NGYH 467
AF PD L S D +WD TG R +A + V P GY
Sbjct: 672 EQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYG 731
Query: 468 LATGGEDNTCR 478
L G C+
Sbjct: 732 LHAGAFSADCK 742
Score = 110 (43.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 34/99 (34%), Positives = 46/99 (46%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQG-HLD 370
W+ P +Q L GH+E V FSP +A+ S +LW+T GSL T G H
Sbjct: 609 WT-PMIQ---TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPK 664
Query: 371 R--------LARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
R + MAF P K + + +D + LWD TG
Sbjct: 665 RRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 61 (26.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
D +L +++ ++T L PD + I + S DR IKLW GD
Sbjct: 1074 DIQLQEAI--FNTQITGLVFSPDAKLILSTSTDRAIKLWDAAT-GD 1116
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 300 (110.7 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 72/240 (30%), Positives = 112/240 (46%)
Query: 317 RLQKFSALKGHTERATDVTFSPVSNHV-ATSSADRTARLW--NTDGSLLNTFQGHLDRLA 373
+LQ+F A H+ + S+ V T D LW ++L+ + GH +
Sbjct: 8 KLQEFVA---HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGID 63
Query: 374 RMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDA 433
+ F S + + T +LWD++ + GH + + FHP G AS LD
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 434 LARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPA 493
++WD+R I +GH + V + F+P+G + +GGEDN ++WDL K L+ +
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 494 HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSI 553
H I + F P E + L TGS D TVK W F+L+ S V L +PD +S+
Sbjct: 184 HEGKIQSLDFHPHE-FLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSV 242
Score = 282 (104.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 58/186 (31%), Positives = 91/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
S + L T D LW + +L GHS + + F L A+ ++WD
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD 87
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + ++F P G A+G D +IWD+RK+ ++ H+ ++
Sbjct: 88 LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G ++V+G D VKVW KL+ HE K+ SLD HP E +AT S D
Sbjct: 148 VLRFTP-DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSAD 206
Query: 560 RWIKLW 565
+ +K W
Sbjct: 207 KTVKFW 212
Score = 277 (102.6 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 62/249 (24%), Positives = 117/249 (46%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD- 358
+L T V +W++ + +L GH+ VTF VA +A T +LW+ +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 90
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
++ T GH + FHP G++ + S D ++WD+ + +GH+R V +
Sbjct: 91 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
F PDG S G D + +VWDL G+ + + H + + F P+ + LATG D T +
Sbjct: 151 FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 210
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE 538
WDL + + + + + F P +G ++ G + ++K++S + +
Sbjct: 211 FWDLETFELIGSGGTETTGVRCLTFNP-DGKSVLCGLQE-SLKIFSWEPIRCHDGVDVGW 268
Query: 539 AKVTSLDIH 547
+ ++ +++H
Sbjct: 269 SNLSDMNVH 277
Score = 216 (81.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 68/274 (24%), Positives = 119/274 (43%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G + ++ L+A + SG +K+W + + L GH V F P
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 116
Query: 344 ATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
A+ S D ++W+ ++T++GH + + F P G+++ + D ++WD+ G
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 176
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
L + H + + FHP L A+ D + WDL T I + V ++F+
Sbjct: 177 LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFN 236
Query: 463 PNGYHLATGGEDNTCRI--WD-LRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
P+G + G +++ +I W+ +R + V SNL S + EG L SY+
Sbjct: 237 PDGKSVLCGLQESL-KIFSWEPIRCHDGVDV--GWSNL-SDMNVH--EGKLLGC-SYNQN 289
Query: 520 -VKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQS 552
V VW D + +SG + S HP++ S
Sbjct: 290 CVGVWVV-DLSRTEPMSGGATQSNS---HPEKTS 319
Score = 182 (69.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
L TGGED+ +W + K ++ + HS+ I V F+ EG + G+ T+K+W +
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG-LVAAGAASGTIKLWDLEE 90
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
K+V++L+GH + S++ HP + A+ S D +K+W R KG H
Sbjct: 91 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIH 137
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 275 (101.9 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 75/268 (27%), Positives = 129/268 (48%)
Query: 297 DGNLLATSSLSGVVKIWSMPRLQKFS------ALKGHTERATDVTFSPVSNHVATSSADR 350
D + + ++S + +W + R + + L GH+ +DV S N+ + S D+
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQ 86
Query: 351 TARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQE- 408
T RLW+ G F+GH + +AF + + + S DKT +LW+ + +QE
Sbjct: 87 TLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQED 146
Query: 409 GHSRSVYGIAFHPDGS--LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH+ V + F P+ S + SCG D +VW+L + GH + ++ SP+G
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGS 206
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+GG+D+ +WDL K+LY + H+++I+ + F P Y+L +Y ++K+W
Sbjct: 207 LCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNR-YWLCV-AYGPSIKIWDLA 263
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
K V+ L TS P S+A
Sbjct: 264 CKKTVEELRPEVVSPTSKADQPQCLSLA 291
Score = 261 (96.9 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 72/253 (28%), Positives = 119/253 (47%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G +S S DGN + S +++W + + +GHT+ V FS + +
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 344 ATSSADRTARLWNTDGSLLNTFQ--GHLDRLARMAFHP--SGKYLGTTSFDKTWRLWDVD 399
+ S D+T +LWNT T Q GH D ++ + F P S + + +D+T ++W++
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLA 181
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
GH+ + + PDGSL S G D+ A +WDL G+++ LE H + +
Sbjct: 182 NCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINAL 240
Query: 460 SFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI-PAHSNLISQVKFEPQ--------EGYF 510
FSPN Y L + +IWDL +K++ + P + S+ +PQ +G
Sbjct: 241 CFSPNRYWLCVA-YGPSIKIWDLACKKTVEELRPEVVSPTSKAD-QPQCLSLAWSTDGQT 298
Query: 511 LVTGSYDMTVKVW 523
L G D T++VW
Sbjct: 299 LFAGYSDNTIRVW 311
Score = 243 (90.6 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 66/220 (30%), Positives = 103/220 (46%)
Query: 361 LLNTFQGHLDRLARMAFHPSGK-YLGTTSFDKT---WRLW-DVDT--GVELLLQEGHSRS 413
L T GH + ++A +P + + S DKT W+L D DT G GHS
Sbjct: 7 LRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHF 66
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ + DG+ A S D R+WDL G++ EGH K VL ++FS + + +G
Sbjct: 67 ISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 474 DNTCRIWD-LRKRKSLYVIPAHSNLISQVKFEPQEGY-FLVTGSYDMTVKVWSGRDFKLV 531
D T ++W+ L + K H++ +S V+F P +V+ +D TVKVW+ + KL
Sbjct: 127 DKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLK 186
Query: 532 KSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
+ GH + ++ + PD + D LW N G
Sbjct: 187 NNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDL-NDG 225
Score = 186 (70.5 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 58/213 (27%), Positives = 95/213 (44%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK-GHTERATDVTFSPV-SN 341
G + + ++S D + + S +K+W+ KF+ + GHT+ + V FSP SN
Sbjct: 104 GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN 163
Query: 342 HVATSSA-DRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ S DRT ++WN + L N GH L + P G + D LWD++
Sbjct: 164 PIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLN 223
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLRTGRSILALEGHV-KPV- 456
G L E H+ + + F P+ L + G ++WDL +++ L V P
Sbjct: 224 DGKNLYTLE-HNDIINALCFSPNRYWLCVAYGPSI--KIWDLACKKTVEELRPEVVSPTS 280
Query: 457 -------LGISFSPNGYHLATGGEDNTCRIWDL 482
L +++S +G L G DNT R+W +
Sbjct: 281 KADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 275 (101.9 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 85/320 (26%), Positives = 140/320 (43%)
Query: 263 DDEIDYALKKVESL--YLDCTE---SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR 317
D E+ +K+E+L ++ T G + + D + +SS G V +W
Sbjct: 37 DVELHQVAEKIEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFT 96
Query: 318 LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW--NTD-----GSLLNTFQGHLD 370
K A+ ++P VA D ++ + D + + H +
Sbjct: 97 TNKEHAVTMPCTWVMACAYAPSGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTN 156
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPD--GSLAAS 428
L+ F S + T+S D T LWDV++G L GH+ V + P G+ S
Sbjct: 157 YLSACCFTNSDMQILTSSGDGTCALWDVESGQMLQSFHGHAADVLCLDLAPSETGNTFVS 216
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
G D A VWD+RTG+ + + E H + + + P+G A+G +D TCR++DLR + +
Sbjct: 217 GGCDKKACVWDMRTGQCVQSFESHDSDINSVRYYPSGDAFASGSDDATCRLYDLRADREV 276
Query: 489 YVIPAHSNLI--SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ S + S V F G L G D T+ VW V L GHE +V++L +
Sbjct: 277 AIYSKESIIFGASSVDFS-LSGRLLFGGYNDYTINVWDVLKGARVSILFGHENRVSTLRV 335
Query: 547 HPDEQSIATVSHDRWIKLWS 566
PD + + S D +++W+
Sbjct: 336 SPDGTAFCSGSWDHTLRIWA 355
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/212 (23%), Positives = 88/212 (41%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GH +++ M + + + ++S D +WD T + V A+ P G
Sbjct: 60 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFTTNKEHAVTMPCTWVMACAYAPSG 119
Query: 424 SLAASCGLDALARVWDLRTGRSI-LALEG-----HVKPVLGISFSPNGYHLATGGEDNTC 477
A GLD V+ L ++ LA + H + F+ + + T D TC
Sbjct: 120 CAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQILTSSGDGTC 179
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
+WD+ + L H+ + + P E G V+G D VW R + V+S
Sbjct: 180 ALWDVESGQMLQSFHGHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFES 239
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H++ + S+ +P + A+ S D +L+ R
Sbjct: 240 HDSDINSVRYYPSGDAFASGSDDATCRLYDLR 271
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 296 (109.3 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 72/237 (30%), Positives = 110/237 (46%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT 357
G LLAT V +WS+ + +L GHT + S + S + R+W+
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 358 DGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYG 416
+ + +L T GH + + FHP G ++ + S D +LWDV + + H+++V
Sbjct: 93 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRC 152
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
+ F PDG AS D ++WDL G+ + GH PV + F P+ Y LA+G D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRT 212
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYD-MTVKVWSG-RDFKLV 531
R WDL K + I + + + F P +G L G D + V W R F +V
Sbjct: 213 IRFWDLEKFHVVSCIEEEATPVRCILFNP-DGCCLYGGFQDSLRVYGWEPERCFDVV 268
Score = 272 (100.8 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 60/232 (25%), Positives = 107/232 (46%)
Query: 320 KFSALKGHTERATDVTFSPVSNHV-ATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAF 377
K + H+ + + + + AT D +W+ + + + + GH + +
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 378 HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
+ + S + R+WD++ L GH ++ + FHP GS AS LD ++
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNL 497
WD+R I + H + V + FSP+G LA+ +D+T ++WDL K ++ HS
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD 549
++ V+F P E Y L +GS D T++ W F +V + V + +PD
Sbjct: 192 VNVVEFHPSE-YLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPD 242
Score = 250 (93.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 59/211 (27%), Positives = 94/211 (44%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNH 342
+G P+ S L+ S SG +++W + + L GH + F P +
Sbjct: 60 TGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSF 119
Query: 343 VATSSADRTARLWNT--DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
VA+ S D +LW+ G + ++ H + + F P GK+L + + D T +LWD+
Sbjct: 120 VASGSLDTDIKLWDVRRKGCIFK-YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G + GHS V + FHP L AS D R WDL + +E PV I
Sbjct: 179 GKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCIL 238
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
F+P+G L GG ++ R++ + V+
Sbjct: 239 FNPDGCCLY-GGFQDSLRVYGWEPERCFDVV 268
Score = 240 (89.5 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 52/205 (25%), Positives = 95/205 (46%)
Query: 362 LNTFQGHLDRLARMAFHPS-GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH 420
L H ++ + S G+ L T D +W V+ ++ GH+ + +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
L + RVWDL + + L GH + + F P G +A+G D ++W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 481 DLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAK 540
D+R++ ++ +H+ + ++F P +G +L + + D TVK+W K++ +GH
Sbjct: 133 DVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 541 VTSLDIHPDEQSIATVSHDRWIKLW 565
V ++ HP E +A+ S DR I+ W
Sbjct: 192 VNVVEFHPSEYLLASGSSDRTIRFW 216
Score = 184 (69.8 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 46/135 (34%), Positives = 70/135 (51%)
Query: 438 WDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSN 496
W L+ I+A +V VLG S G LATGG+D +W + K + + H+
Sbjct: 11 WKLQ---EIVAHSSNVSSLVLGKS---TGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT 64
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATV 556
I ++ +E +V GS +++VW K++++L GH+A + SLD HP +A+
Sbjct: 65 PIESLQISAKEE-LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASG 123
Query: 557 SHDRWIKLWSTRNKG 571
S D IKLW R KG
Sbjct: 124 SLDTDIKLWDVRRKG 138
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 72/249 (28%), Positives = 116/249 (46%)
Query: 256 DNPDESIDDEIDYALKKVESLYLDCTESGD-DRPLSGCSY-------SHDGNLLATSSLS 307
+NPD I D + + D T G R L G S+ SHDG + S
Sbjct: 32 ENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWD 91
Query: 308 GVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQG 367
+++W + + KGHT+ V FS + + + S D T ++WNT G T +G
Sbjct: 92 NTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEG 151
Query: 368 ---HLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS 424
H D ++ + F P+ + + S+D ++WD+ + H+ V + PDGS
Sbjct: 152 PEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGS 211
Query: 425 LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
L AS G D A +W+L +G+ + LE + ++FSPN Y L+ +D IWDL
Sbjct: 212 LCASGGKDTFACLWELSSGKPLYKLEAR-NTINALAFSPNKYWLSAATDDKII-IWDLLT 269
Query: 485 RKSLY-VIP 492
++ L ++P
Sbjct: 270 KQVLAEIVP 278
Score = 258 (95.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 71/259 (27%), Positives = 117/259 (45%)
Query: 323 ALKGHTERATDVTFSPVS-NHVATSSADRTARLWN---TD----GSLLNTFQGHLDRLAR 374
+L GH T + SP + + + +SS D+T +W TD G + +GH +
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+ G++ + S+D T RLWD+ GV L +GH++ V +AF D S DA
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 435 ARVWDLRTGRSILALEG---HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI 491
+VW+ G LEG H V I FSPN + +G DN +IWD++ K + +
Sbjct: 136 IKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Query: 492 PAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ 551
H+ ++ V P +G +G D +W K + L + +L P++
Sbjct: 195 TDHTGYVNTVTISP-DGSLCASGGKDTFACLWELSSGKPLYKLEARNT-INALAFSPNKY 252
Query: 552 SIATVSHDRWIKLWSTRNK 570
++ + D+ I +W K
Sbjct: 253 WLSAATDDKII-IWDLLTK 270
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 47/177 (26%), Positives = 80/177 (45%)
Query: 409 GHSRSVYGIAFHPDG-SLAASCGLDALARVWDLRT------GRSILALEGHVKPVLGISF 461
GH+ V IA P+ S D VW L G++ +L+GH V +
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
S +G +G DNT R+WD+ K S + H+ + V F + +++GS D T+K
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFS-SDNRQIISGSRDATIK 137
Query: 522 VWS--GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
VW+ G ++ H+ V+ + P+ +I + S D +K+W ++ H +
Sbjct: 138 VWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 85/320 (26%), Positives = 139/320 (43%)
Query: 263 DDEIDYALKKVESL--YLDCTE---SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR 317
D E+ ++VE+L ++ T G + + D L +SS G V +W
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFT 94
Query: 318 LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW------NTD-GSLLNTFQGHLD 370
K A+ ++P +A D ++ N + + + H +
Sbjct: 95 TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTN 154
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPD--GSLAAS 428
L+ +F S + T S D T LWDV++G L GH V + P G+ S
Sbjct: 155 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVS 214
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
G D A VWD+R+G+ + A E H + + + P+G A+G +D TCR++DLR + +
Sbjct: 215 GGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREV 274
Query: 489 YVIPAHSNLI--SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ S + S V F G L G D T+ VW V L GHE +V++L +
Sbjct: 275 AIYSKESIIFGASSVDFS-LSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRV 333
Query: 547 HPDEQSIATVSHDRWIKLWS 566
PD + + S D +++W+
Sbjct: 334 SPDGTAFCSGSWDHTLRVWA 353
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/212 (24%), Positives = 88/212 (41%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GH +++ M + + L ++S D +WD T + V A+ P G
Sbjct: 58 TLKGHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 424 SLAASCGLDALARVWDLRTGRSI-LALEG-----HVKPVLGISFSPNGYHLATGGEDNTC 477
A GLD V+ L ++ +A + H + SF+ + + T D TC
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTC 177
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
+WD+ + L H + + P E G V+G D VW R + V++
Sbjct: 178 ALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET 237
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
HE+ + S+ +P + A+ S D +L+ R
Sbjct: 238 HESDINSVRYYPSGDAFASGSDDATCRLYDLR 269
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 217 (81.4 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 74/250 (29%), Positives = 111/250 (44%)
Query: 299 NLLATSSLSGVV-KIWS-MPRLQK-FSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
N GV+ K W+ + RLQ+ + L+ R+ + + D T W
Sbjct: 44 NEATCKKFEGVLEKKWTGIARLQRRINDLEAEV-RSLQAELEASPSAARAKNQDPTN--W 100
Query: 356 NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSV 414
S +T H D + +AFHP L + S D T ++WD + G +E L+ GH R V
Sbjct: 101 LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLK-GHIRGV 159
Query: 415 YGIAF--HPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISF-SPNGYHLAT 470
G+ + +L ASC D ++WD + +I L GH V + F + N HL +
Sbjct: 160 SGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLIS 219
Query: 471 GGEDNTCRIWDLRKRKSLYVIP-AHSNLISQVKFEPQ-EGYFLVTGSYDMTVKVWSGRDF 528
D T RIWD+ + VI A + I V P +G +LV+G D + VW
Sbjct: 220 ASRDGTLRIWDVSTGFCVKVIKSATESWIRDVS--PSFDGKWLVSGGRDQAITVWEVSSA 277
Query: 529 KLVKSLSGHE 538
+ +L GHE
Sbjct: 278 EPKAALLGHE 287
Score = 201 (75.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDR 371
W +P+ L H + T V F PV +A+ S D T ++W+ + G + T +GH+
Sbjct: 100 W-LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRG 158
Query: 372 LARMAF--HPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSVYGIAF--HPDGSLA 426
++ + + L + S D T +LWD + GH SV + F D L
Sbjct: 159 VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLI 218
Query: 427 ASCGLDALARVWDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
S D R+WD+ TG + ++ + + +S S +G L +GG D +W++
Sbjct: 219 -SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSA 277
Query: 486 KSLYVIPAHSNLISQVKFEPQEGY 509
+ + H N I F P Y
Sbjct: 278 EPKAALLGHENFIECCVFAPPASY 301
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L H V ++F P LA+G ED T +IWD + + H +S + + Q+G
Sbjct: 110 LTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKG 169
Query: 509 YFLVTG-SYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLD-IHPDEQSIATVSHDRWIKLW 565
L+ S D+T+K+W +D+ +++LSGH+ V+S+ + ++ + + S D +++W
Sbjct: 170 NTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW 229
Score = 143 (55.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 343 VATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
VAT + D+T +LW G L+ T GH + + + FHP GKYL + S DKT R WD+
Sbjct: 323 VATGARDKTIKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEG 382
Query: 403 ELL--LQEGHSRSVYGIAFHP 421
L+ + H V I + P
Sbjct: 383 RLVKTISGAHEHFVSCIRWAP 403
Score = 121 (47.7 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
F+ TG+ D T+K+W R +L+K+L GH+ V L HP + + +VS D+ I+ W
Sbjct: 322 FVATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 570 KG 571
+G
Sbjct: 381 EG 382
Score = 116 (45.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY-- 489
D ++W+ R GR I L GH V G+ F P G +L + +D T R WDL + L
Sbjct: 329 DKTIKLWEAR-GRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKT 387
Query: 490 VIPAHSNLISQVKFEP 505
+ AH + +S +++ P
Sbjct: 388 ISGAHEHFVSCIRWAP 403
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 368 HLDRLARMAFHP----SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
HL LA + P S +++ T + DKT +LW+ G + GH V G+ FHP G
Sbjct: 303 HLATLAGLKKPPPATSSCEFVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGG 361
Query: 424 SLAASCGLDALARVWDL-RTGRSILALEG-HVKPVLGISFSPN 464
S D R WDL + GR + + G H V I ++P+
Sbjct: 362 KYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAPS 404
Score = 110 (43.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS-GR 526
+ATG D T ++W+ R R + + H N + + F P G +L + S D T++ W +
Sbjct: 323 VATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPG-GKYLFSVSDDKTIRCWDLSQ 380
Query: 527 DFKLVKSLSG-HEAKVTSL 544
+ +LVK++SG HE V+ +
Sbjct: 381 EGRLVKTISGAHEHFVSCI 399
Score = 59 (25.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSN--HVAT 345
S S DG L + + +W + + +AL GH F+P ++ H+AT
Sbjct: 252 SPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLAT 306
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 217 (81.4 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 74/250 (29%), Positives = 111/250 (44%)
Query: 299 NLLATSSLSGVV-KIWS-MPRLQK-FSALKGHTERATDVTFSPVSNHVATSSADRTARLW 355
N GV+ K W+ + RLQ+ + L+ R+ + + D T W
Sbjct: 44 NEATCKKFEGVLEKKWTGIARLQRRINDLEAEV-RSLQAELEASPSAARAKNQDPTN--W 100
Query: 356 NTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSV 414
S +T H D + +AFHP L + S D T ++WD + G +E L+ GH R V
Sbjct: 101 LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLK-GHIRGV 159
Query: 415 YGIAF--HPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISF-SPNGYHLAT 470
G+ + +L ASC D ++WD + +I L GH V + F + N HL +
Sbjct: 160 SGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLIS 219
Query: 471 GGEDNTCRIWDLRKRKSLYVIP-AHSNLISQVKFEPQ-EGYFLVTGSYDMTVKVWSGRDF 528
D T RIWD+ + VI A + I V P +G +LV+G D + VW
Sbjct: 220 ASRDGTLRIWDVSTGFCVKVIKSATESWIRDVS--PSFDGKWLVSGGRDQAITVWEVSSA 277
Query: 529 KLVKSLSGHE 538
+ +L GHE
Sbjct: 278 EPKAALLGHE 287
Score = 201 (75.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 313 WSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDR 371
W +P+ L H + T V F PV +A+ S D T ++W+ + G + T +GH+
Sbjct: 100 W-LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRG 158
Query: 372 LARMAF--HPSGKYLGTTSFDKTWRLWDVDTG-VELLLQEGHSRSVYGIAF--HPDGSLA 426
++ + + L + S D T +LWD + GH SV + F D L
Sbjct: 159 VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLI 218
Query: 427 ASCGLDALARVWDLRTGRSILALEGHVKP-VLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
S D R+WD+ TG + ++ + + +S S +G L +GG D +W++
Sbjct: 219 -SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSA 277
Query: 486 KSLYVIPAHSNLISQVKFEPQEGY 509
+ + H N I F P Y
Sbjct: 278 EPKAALLGHENFIECCVFAPPASY 301
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEG 508
L H V ++F P LA+G ED T +IWD + + H +S + + Q+G
Sbjct: 110 LTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKG 169
Query: 509 YFLVTG-SYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLD-IHPDEQSIATVSHDRWIKLW 565
L+ S D+T+K+W +D+ +++LSGH+ V+S+ + ++ + + S D +++W
Sbjct: 170 NTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW 229
Score = 143 (55.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 343 VATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
VAT + D+T +LW G L+ T GH + + + FHP GKYL + S DKT R WD+
Sbjct: 323 VATGARDKTIKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEG 382
Query: 403 ELL--LQEGHSRSVYGIAFHP 421
L+ + H V I + P
Sbjct: 383 RLVKTISGAHEHFVSCIRWAP 403
Score = 121 (47.7 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
F+ TG+ D T+K+W R +L+K+L GH+ V L HP + + +VS D+ I+ W
Sbjct: 322 FVATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 570 KG 571
+G
Sbjct: 381 EG 382
Score = 116 (45.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 432 DALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLY-- 489
D ++W+ R GR I L GH V G+ F P G +L + +D T R WDL + L
Sbjct: 329 DKTIKLWEAR-GRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKT 387
Query: 490 VIPAHSNLISQVKFEP 505
+ AH + +S +++ P
Sbjct: 388 ISGAHEHFVSCIRWAP 403
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 368 HLDRLARMAFHP----SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
HL LA + P S +++ T + DKT +LW+ G + GH V G+ FHP G
Sbjct: 303 HLATLAGLKKPPPATSSCEFVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGG 361
Query: 424 SLAASCGLDALARVWDL-RTGRSILALEG-HVKPVLGISFSPN 464
S D R WDL + GR + + G H V I ++P+
Sbjct: 362 KYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAPS 404
Score = 110 (43.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS-GR 526
+ATG D T ++W+ R R + + H N + + F P G +L + S D T++ W +
Sbjct: 323 VATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPG-GKYLFSVSDDKTIRCWDLSQ 380
Query: 527 DFKLVKSLSG-HEAKVTSL 544
+ +LVK++SG HE V+ +
Sbjct: 381 EGRLVKTISGAHEHFVSCI 399
Score = 59 (25.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSN--HVAT 345
S S DG L + + +W + + +AL GH F+P ++ H+AT
Sbjct: 252 SPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLAT 306
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 273 (101.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 85/320 (26%), Positives = 139/320 (43%)
Query: 263 DDEIDYALKKVESL--YLDCTE---SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR 317
D E+ ++VE+L ++ T G + + D + +SS G V +W
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 94
Query: 318 LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW------NTD-GSLLNTFQGHLD 370
K A+ ++P +A D ++ N + + + H +
Sbjct: 95 TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTN 154
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPD--GSLAAS 428
L+ +F S + T S D T LWDV++G L GH V + P G+ S
Sbjct: 155 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVS 214
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
G D A VWD+R+G+ + A E H V + + P+G A+G +D TCR++DLR + +
Sbjct: 215 GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 274
Query: 489 YVIPAHSNLI--SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ S + S V F G L G D T+ VW V L GHE +V++L +
Sbjct: 275 AIYSKESIIFGASSVDFS-LSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRV 333
Query: 547 HPDEQSIATVSHDRWIKLWS 566
PD + + S D +++W+
Sbjct: 334 SPDGTAFCSGSWDHTLRVWA 353
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/212 (24%), Positives = 88/212 (41%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GH +++ M + + + ++S D +WD T + V A+ P G
Sbjct: 58 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 424 SLAASCGLDALARVWDLRTGRSI-LALEG-----HVKPVLGISFSPNGYHLATGGEDNTC 477
A GLD V+ L ++ +A + H + SF+ + + T D TC
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTC 177
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
+WD+ + L H + + P E G V+G D VW R + V++
Sbjct: 178 ALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET 237
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
HE+ V S+ +P + A+ S D +L+ R
Sbjct: 238 HESDVNSVRYYPSGDAFASGSDDATCRLYDLR 269
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 297 (109.6 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 69/186 (37%), Positives = 97/186 (52%)
Query: 343 VATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG 401
+A+ S D T RLW+ GSL T +GH + +AF P G+ L + SFDKT RLWD TG
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG 769
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
GHS V +AF PDG L AS D R+WD TG L GH V ++F
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAF 829
Query: 462 SPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
SP+G LA+G D T R+WD +L +++++F Q+G ++ T + ++
Sbjct: 830 SPDGRLLASGSFDKTVRLWD-PATGTLQQTLIIKGTVTELQFS-QDGSYISTNLGSLNIQ 887
Query: 522 VWSGRD 527
G +
Sbjct: 888 SRCGNN 893
Score = 278 (102.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 66/174 (37%), Positives = 93/174 (53%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TD 358
+LA+ S V++W L+GH+ V FSP +A+ S D+T RLW+
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
GSL T +GH + + +AF P G+ L + SFDKT RLWD TG GHS +V +A
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 419 FHPDGSLAASCGLDALARVWDLRTG--RSILALEGHVKPVLGISFSPNGYHLAT 470
F PDG L AS D R+WD TG + L ++G V + FS +G +++T
Sbjct: 829 FSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTE---LQFSQDGSYIST 879
Score = 265 (98.3 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 62/165 (37%), Positives = 86/165 (52%)
Query: 401 GVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGIS 460
G EL EGHS SV+ + AS D R+WD TG LEGH VL ++
Sbjct: 693 GAELQTLEGHSNSVWAVL--------ASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVA 744
Query: 461 FSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTV 520
FSP+G LA+G D T R+WD + HSN + V F P +G L +GS+D TV
Sbjct: 745 FSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSP-DGRLLASGSFDKTV 803
Query: 521 KVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
++W L ++L GH V S+ PD + +A+ S D+ ++LW
Sbjct: 804 RLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 53/135 (39%), Positives = 74/135 (54%)
Query: 293 SYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTA 352
++S DG LLA+ S V++W L+GH+ V FSP +A+ S D+T
Sbjct: 744 AFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTV 803
Query: 353 RLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV--ELLLQEG 409
RLW+ GSL T +GH D + +AF P G+ L + SFDKT RLWD TG + L+ +G
Sbjct: 804 RLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKG 863
Query: 410 HSRSVYGIAFHPDGS 424
+V + F DGS
Sbjct: 864 ---TVTELQFSQDGS 875
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 278 LDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
L T G + ++S DG LLA+ S V++W L+GH++ V FS
Sbjct: 771 LQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFS 830
Query: 338 PVSNHVATSSADRTARLWN-TDGSLLNTF--QGHLDRLARMAFHPSGKYLGT 386
P +A+ S D+T RLW+ G+L T +G + L F G Y+ T
Sbjct: 831 PDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQ---FSQDGSYIST 879
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 295 (108.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 76/289 (26%), Positives = 134/289 (46%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
NLLA ++ S ++I + + + +GHT+ V S +AT+S D ARLW +
Sbjct: 352 NLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWN 411
Query: 359 GSLLN-----TFQGHLDRLARMAFHPSG---KYLGTTSFDKTWRLWDVDTGVELLLQ--- 407
G L + FQGH + ++ S K+L T S D T + W + +++
Sbjct: 412 GELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSE 471
Query: 408 ---EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
H + + I P+ A+ D L +VW +G +I L+GH + + I+F
Sbjct: 472 YTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKF 531
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
+ TG D T ++W L + H+N + +VKF +E L++ D +K+W
Sbjct: 532 DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWD 591
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
+ +++KSL H+ ++ ++D+ D + T D + W T N +E
Sbjct: 592 YKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW-TDNTEEE 639
Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 64/260 (24%), Positives = 112/260 (43%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIW----SMPRLQKFSALKGHTERATDVTFSPVSNH-- 342
L+ S DG +AT+S ++W + + F+ +GH T ++ S N
Sbjct: 384 LNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPK 443
Query: 343 -VATSSADRTARLW---NTDGSLLNTFQ----GHLDRLARMAFHPSGKYLGTTSFDKTWR 394
+ T S D T + W NT S++ T + H + + P+ +Y T S+DK +
Sbjct: 444 FLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGK 503
Query: 395 LWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK 454
+W D+G + + +GH R ++ I F+ L + D +VW L LEGH
Sbjct: 504 VWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTN 563
Query: 455 PVLGISFSPNGYH--LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
V + F N H L + G D ++WD ++ + + + H I + + +G +
Sbjct: 564 SVQRVKFF-NREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLK-NDGEYFT 621
Query: 513 TGSYDMTVKVWSGRDFKLVK 532
T D + W+ + VK
Sbjct: 622 TADADGKLSFWTDNTEEEVK 641
Score = 194 (73.4 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 52/221 (23%), Positives = 102/221 (46%)
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
N D ++ G + + + P G YL S + R++D++ G ++ V
Sbjct: 46 NLDTNEIIYKIPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKG-SVIKNFKLPSPV 104
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF----SPNGYHLAT 470
Y + SL A G D + VWD+ G +L+GH + ++F + + LA+
Sbjct: 105 YISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLAS 164
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
G T +IWDL KR+ ++ + H+ + V F+ Q+G ++G D V +++ ++FK
Sbjct: 165 GDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFD-QDGDLFISGGRDNVVIIYNTKNFKT 223
Query: 531 VKSLSGHEAKVTS--LDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + +E + + + D Q T + +K+W ++
Sbjct: 224 INTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 54/201 (26%), Positives = 87/201 (43%)
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P L + R+ D++ +EL + EGH+ + + DG A+ D AR+W
Sbjct: 349 PEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Query: 439 ----DLRTGRSILALEGHVKPVLGISFSPNGYH---LATGGEDNTCRIWDLRK------R 485
+L+ +GH + IS S + L TG D T + W + +
Sbjct: 409 RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVK 468
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
S Y AH I+ + P + YF T SYD KVW + + L GH+ + ++
Sbjct: 469 TSEYTRRAHDKDINSIDVSPNDEYF-ATASYDKLGKVWQTDSGETIGVLKGHKRGLWDIN 527
Query: 546 IHPDEQSIATVSHDRWIKLWS 566
+ ++ I T S D+ IK+WS
Sbjct: 528 FYKFDKLIVTGSGDKTIKVWS 548
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 268 YALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGH 327
YA +E +Y+ G +S + +G LL + L+ V I ++ + + G
Sbjct: 8 YAHTDIEPIYV----GGTSASIS----TSNGELLLATPLNEDVIITNLDTNEIIYKIPGD 59
Query: 328 TERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGT 386
E T++T +P +++A S + R+++ + GS++ F+ S +
Sbjct: 60 GEVITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLFAFG 119
Query: 387 TSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH-----PDGSLAASCGLDALARVWDLR 441
S D +WD++ G +GH ++ + FH D LA+ + + ++WDL
Sbjct: 120 GS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTV-KIWDLV 177
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ- 500
R I L+ H V G+ F +G +GG DN I++ + K++ P + + +
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAG 237
Query: 501 -VKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
V YF TG + +K+W + +++
Sbjct: 238 FVSLIDDRQYFY-TGGSENVLKIWDIKSGEMI 268
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
P+ +L A R+ D+ + EGH + + S +G +AT +DN R+W
Sbjct: 349 PEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Query: 481 ----DLRKRKSLYVIPAHSNLISQVKFEPQ--EGYFLVTGSYDMTVKVWS--GRDFKLVK 532
+L+ + H+ I+ + E FLVTGS D+T+K W +VK
Sbjct: 409 RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVK 468
Query: 533 SLS----GHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ H+ + S+D+ P+++ AT S+D+ K+W T
Sbjct: 469 TSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQT 507
Score = 157 (60.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 40/171 (23%), Positives = 68/171 (39%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T D+ ++ S + AT+S + K+W + LKGH D+ F
Sbjct: 473 TRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD 532
Query: 341 NHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAF----HPSGKYLGTTSFDKTWRL 395
+ T S D+T ++W+ D S T +GH + + R+ F HP L + D +L
Sbjct: 533 KLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQ---LLSCGADGLIKL 589
Query: 396 WDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI 446
WD G + + H + ++ + DG + D W T +
Sbjct: 590 WDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEV 640
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 42/193 (21%), Positives = 76/193 (39%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
+G+ L T ++ + ++DT + G + + PDGS A L R++D
Sbjct: 29 NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYLAMISQSQLLRIFD 88
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L G S++ PV S A GG D +WD+ + + H I
Sbjct: 89 LNKG-SVIKNFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTIC 147
Query: 500 QVKFEPQ---EGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATV 556
+ F + + + L +G TVK+W + + +L H V + D +
Sbjct: 148 SLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISG 207
Query: 557 SHDRWIKLWSTRN 569
D + +++T+N
Sbjct: 208 GRDNVVIIYNTKN 220
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 295 (108.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 76/289 (26%), Positives = 134/289 (46%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
NLLA ++ S ++I + + + +GHT+ V S +AT+S D ARLW +
Sbjct: 352 NLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWN 411
Query: 359 GSLLN-----TFQGHLDRLARMAFHPSG---KYLGTTSFDKTWRLWDVDTGVELLLQ--- 407
G L + FQGH + ++ S K+L T S D T + W + +++
Sbjct: 412 GELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSE 471
Query: 408 ---EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPN 464
H + + I P+ A+ D L +VW +G +I L+GH + + I+F
Sbjct: 472 YTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKF 531
Query: 465 GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
+ TG D T ++W L + H+N + +VKF +E L++ D +K+W
Sbjct: 532 DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWD 591
Query: 525 GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
+ +++KSL H+ ++ ++D+ D + T D + W T N +E
Sbjct: 592 YKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW-TDNTEEE 639
Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 64/260 (24%), Positives = 112/260 (43%)
Query: 289 LSGCSYSHDGNLLATSSLSGVVKIW----SMPRLQKFSALKGHTERATDVTFSPVSNH-- 342
L+ S DG +AT+S ++W + + F+ +GH T ++ S N
Sbjct: 384 LNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPK 443
Query: 343 -VATSSADRTARLW---NTDGSLLNTFQ----GHLDRLARMAFHPSGKYLGTTSFDKTWR 394
+ T S D T + W NT S++ T + H + + P+ +Y T S+DK +
Sbjct: 444 FLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGK 503
Query: 395 LWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVK 454
+W D+G + + +GH R ++ I F+ L + D +VW L LEGH
Sbjct: 504 VWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTN 563
Query: 455 PVLGISFSPNGYH--LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
V + F N H L + G D ++WD ++ + + + H I + + +G +
Sbjct: 564 SVQRVKFF-NREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLK-NDGEYFT 621
Query: 513 TGSYDMTVKVWSGRDFKLVK 532
T D + W+ + VK
Sbjct: 622 TADADGKLSFWTDNTEEEVK 641
Score = 194 (73.4 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 52/221 (23%), Positives = 102/221 (46%)
Query: 356 NTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSV 414
N D ++ G + + + P G YL S + R++D++ G ++ V
Sbjct: 46 NLDTNEIIYKIPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKG-SVIKNFKLPSPV 104
Query: 415 YGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF----SPNGYHLAT 470
Y + SL A G D + VWD+ G +L+GH + ++F + + LA+
Sbjct: 105 YISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLAS 164
Query: 471 GGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKL 530
G T +IWDL KR+ ++ + H+ + V F+ Q+G ++G D V +++ ++FK
Sbjct: 165 GDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFD-QDGDLFISGGRDNVVIIYNTKNFKT 223
Query: 531 VKSLSGHEAKVTS--LDIHPDEQSIATVSHDRWIKLWSTRN 569
+ + +E + + + D Q T + +K+W ++
Sbjct: 224 INTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 54/201 (26%), Positives = 87/201 (43%)
Query: 379 PSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
P L + R+ D++ +EL + EGH+ + + DG A+ D AR+W
Sbjct: 349 PEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Query: 439 ----DLRTGRSILALEGHVKPVLGISFSPNGYH---LATGGEDNTCRIWDLRK------R 485
+L+ +GH + IS S + L TG D T + W + +
Sbjct: 409 RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVK 468
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLD 545
S Y AH I+ + P + YF T SYD KVW + + L GH+ + ++
Sbjct: 469 TSEYTRRAHDKDINSIDVSPNDEYF-ATASYDKLGKVWQTDSGETIGVLKGHKRGLWDIN 527
Query: 546 IHPDEQSIATVSHDRWIKLWS 566
+ ++ I T S D+ IK+WS
Sbjct: 528 FYKFDKLIVTGSGDKTIKVWS 548
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 268 YALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGH 327
YA +E +Y+ G +S + +G LL + L+ V I ++ + + G
Sbjct: 8 YAHTDIEPIYV----GGTSASIS----TSNGELLLATPLNEDVIITNLDTNEIIYKIPGD 59
Query: 328 TERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGT 386
E T++T +P +++A S + R+++ + GS++ F+ S +
Sbjct: 60 GEVITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLFAFG 119
Query: 387 TSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH-----PDGSLAASCGLDALARVWDLR 441
S D +WD++ G +GH ++ + FH D LA+ + + ++WDL
Sbjct: 120 GS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTV-KIWDLV 177
Query: 442 TGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ- 500
R I L+ H V G+ F +G +GG DN I++ + K++ P + + +
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAG 237
Query: 501 -VKFEPQEGYFLVTGSYDMTVKVWSGRDFKLV 531
V YF TG + +K+W + +++
Sbjct: 238 FVSLIDDRQYFY-TGGSENVLKIWDIKSGEMI 268
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 421 PDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
P+ +L A R+ D+ + EGH + + S +G +AT +DN R+W
Sbjct: 349 PEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Query: 481 ----DLRKRKSLYVIPAHSNLISQVKFEPQ--EGYFLVTGSYDMTVKVWS--GRDFKLVK 532
+L+ + H+ I+ + E FLVTGS D+T+K W +VK
Sbjct: 409 RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVK 468
Query: 533 SLS----GHEAKVTSLDIHPDEQSIATVSHDRWIKLWST 567
+ H+ + S+D+ P+++ AT S+D+ K+W T
Sbjct: 469 TSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQT 507
Score = 157 (60.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 40/171 (23%), Positives = 68/171 (39%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T D+ ++ S + AT+S + K+W + LKGH D+ F
Sbjct: 473 TRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD 532
Query: 341 NHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAF----HPSGKYLGTTSFDKTWRL 395
+ T S D+T ++W+ D S T +GH + + R+ F HP L + D +L
Sbjct: 533 KLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQ---LLSCGADGLIKL 589
Query: 396 WDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI 446
WD G + + H + ++ + DG + D W T +
Sbjct: 590 WDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEV 640
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 42/193 (21%), Positives = 76/193 (39%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
+G+ L T ++ + ++DT + G + + PDGS A L R++D
Sbjct: 29 NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYLAMISQSQLLRIFD 88
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L G S++ PV S A GG D +WD+ + + H I
Sbjct: 89 LNKG-SVIKNFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTIC 147
Query: 500 QVKFEPQ---EGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATV 556
+ F + + + L +G TVK+W + + +L H V + D +
Sbjct: 148 SLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISG 207
Query: 557 SHDRWIKLWSTRN 569
D + +++T+N
Sbjct: 208 GRDNVVIIYNTKN 220
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 290 (107.1 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 80/270 (29%), Positives = 128/270 (47%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNT-D 358
LLA+ S V+IW++ L GHT T V + N + +SS D+T R+W+ D
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGG-QNWIYSSSYDKTIRIWDAKD 299
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH-SRSVYGI 417
G L+ +GH R+ ++ L + ++D T D + E ++ Y
Sbjct: 300 GKCLHILKGHAARVNHLSLSTE-HVLRSGAYDHT------DFKPKSFSDERRKAKERYEA 352
Query: 418 AFHPDGSLAASCGLDALARVWD-LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
G S D +WD ++ + I + GH K V SFSP+G +AT D++
Sbjct: 353 CLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSS 412
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
R+WD + K L + H + Q + + LV+ S D T+KVW R K+ L G
Sbjct: 413 VRLWDGKTGKFLATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKKMKFDLPG 471
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
HE +V ++D PD Q +A+ D+ +++WS
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 283 (104.7 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 66/192 (34%), Positives = 103/192 (53%)
Query: 364 TFQGHLDRLARMAFHPS-GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPD 422
+ GH + F PS L T S D T RLWD DT + +GH+ V +A+ PD
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPD 188
Query: 423 GSLAASCGLDALARVWDLRTGRSIL-ALEGHVKPVLGISFSP------NG-YHLATGGED 474
S+ A+ +D R WD + G I AL H KP++ + + P +G Y LA+G +D
Sbjct: 189 ASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKD 248
Query: 475 NTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSL 534
NT RIW+++ R L+ + H+ I+ V++ Q ++ + SYD T+++W +D K + L
Sbjct: 249 NTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN--WIYSSSYDKTIRIWDAKDGKCLHIL 306
Query: 535 SGHEAKVTSLDI 546
GH A+V L +
Sbjct: 307 KGHAARVNHLSL 318
Score = 257 (95.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 69/246 (28%), Positives = 114/246 (46%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T SG P++ C N + +SS ++IW + LKGH R ++ S +
Sbjct: 264 TLSGHTAPIT-CVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLS--T 320
Query: 341 NHVATSSA-DRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
HV S A D T S + + +R SG+ L + S D LWD
Sbjct: 321 EHVLRSGAYDHTDF---KPKSFSDERRKAKERY-EACLKQSGERLVSASDDLQLILWDPQ 376
Query: 400 TGVELLLQ-EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
+ + + GH + V +F PDG A+ D+ R+WD +TG+ + L GHV V
Sbjct: 377 KSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQ 436
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDM 518
++S + L + +D T ++WD+R +K + +P H + + V + P +G + +G D
Sbjct: 437 CAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP-DGQRVASGGADK 495
Query: 519 TVKVWS 524
V++WS
Sbjct: 496 AVRIWS 501
Score = 248 (92.4 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 73/300 (24%), Positives = 136/300 (45%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFS-ALKGHTERATDVTFSPV 339
T G +S +++ D +++AT S+ ++ W + AL+ HT+ + + P+
Sbjct: 172 TMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPL 231
Query: 340 -----SNH--VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDK 391
S +A+ S D T R+WN +LL T GH + + + ++ ++S+DK
Sbjct: 232 HLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIYSSSYDK 290
Query: 392 TWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEG 451
T R+WD G L + +GH+ V ++ + L + D D + +S
Sbjct: 291 TIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGA-YDHT----DFKP-KSFSDERR 344
Query: 452 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR-KSLYVIPAHSNLISQVKFEPQEGYF 510
K +G L + +D +WD +K K + + H +++ F P +G
Sbjct: 345 KAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSP-DGRC 403
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
+ T S+D +V++W G+ K + +L GH A V D + + + S D +K+W R+K
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 35/134 (26%), Positives = 64/134 (47%)
Query: 444 RSILALEGHVKPVLGISFSPN-GYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVK 502
R ++ GH ++ FSP+ L TG D T R+WD + + + H+N +S V
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 503 FEPQEGYFLVTGSYDMTVKVWSGRDFKLV-KSLSGHEAKVTSL---DIH--PDEQS--IA 554
+ P + + TGS D T++ W + + +L H + +L +H PD +A
Sbjct: 185 WAP-DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 555 TVSHDRWIKLWSTR 568
+ S D +++W+ +
Sbjct: 244 SGSKDNTVRIWNVK 257
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 295 (108.9 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 72/240 (30%), Positives = 112/240 (46%)
Query: 317 RLQKFSALKGHTERATDVTFSPVSNHV-ATSSADRTARLW--NTDGSLLNTFQGHLDRLA 373
+LQ+F A H+ + S+ V T D LW ++L+ + GH +
Sbjct: 8 KLQEFVA---HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGID 63
Query: 374 RMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDA 433
+ F S + + T +LWD++ + GH + + FHP G AS LD
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 434 LARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPA 493
++WD+R I +GH + V + F+P+G + +GGEDN ++WDL K L +
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 494 HSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSI 553
H I + F P E + L TGS D TVK W F+L+ S A V L +PD +++
Sbjct: 184 HEGQIQSLDFHPHE-FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTV 242
Score = 278 (102.9 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 62/249 (24%), Positives = 118/249 (47%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD- 358
+L T V +W++ + +L GH+ VTF VA +A T +LW+ +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 359 GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
++ T GH + FHP G++ + S D ++WD+ + +GH+R V +
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
F PDG S G D + +VWDL G+ + + H + + F P+ + LATG D T +
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHE 538
WDL + + + + + F P +G ++ G + ++K++S + +
Sbjct: 211 FWDLETFELIGSGGPETAGVRCLSFNP-DGKTVLCGLQE-SLKIFSWEPIRCHDGVDVGW 268
Query: 539 AKVTSLDIH 547
++++ +++H
Sbjct: 269 SRLSDMNVH 277
Score = 277 (102.6 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 58/186 (31%), Positives = 90/186 (48%)
Query: 380 SGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD 439
S + L T D LW + +L GHS + + F L A+ ++WD
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 440 LRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLIS 499
L + + L GH + + F P G A+G D +IWD+RK+ ++ H+ ++
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 500 QVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHD 559
++F P +G ++V+G D VKVW KL+ HE ++ SLD HP E +AT S D
Sbjct: 148 VLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSAD 206
Query: 560 RWIKLW 565
R +K W
Sbjct: 207 RTVKFW 212
Score = 189 (71.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 298 GNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN- 356
G A+ SL +KIW + + KGHT + F+P V + D ++W+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 357 TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEG-HSRSVY 415
T G LL F+ H ++ + FHP L T S D+T + WD++T EL+ G + V
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET-FELIGSGGPETAGVR 231
Query: 416 GIAFHPDGSLAASCGLDALARV--WD 439
++F+PDG CGL ++ W+
Sbjct: 232 CLSFNPDGKTVL-CGLQESLKIFSWE 256
Score = 180 (68.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
L TGGED+ +W + K ++ + HS+ I V F+ E + G+ T+K+W +
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE-VLVAAGAASGTIKLWDLEE 90
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEH 574
K+V++L+GH + S+D HP + A+ S D +K+W R KG H
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH 137
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 271 (100.5 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 87/311 (27%), Positives = 146/311 (46%)
Query: 274 ESLYLDCTESGDDRPLSGCSYSHDG-NLLATSSLSGVVKIWSMPRLQ-KFSA----LKGH 327
E L L T G ++ S + + ++L + S + +W++ R + L GH
Sbjct: 3 EQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGH 62
Query: 328 TERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGT 386
+ +D S S++ ++S D+T RLW+ + G + F GH + ++ P + + +
Sbjct: 63 SHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVS 122
Query: 387 TSFDKTWRLWDVDTGVELLLQEG-HSRSVYGIAF--HPDGSLAASCGLDALARVWDLRTG 443
S DKT ++W++ + + +G HS V + F +PD S G D +VWDL T
Sbjct: 123 GSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETF 182
Query: 444 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF 503
+ GH V ++ SP+G A+GG D T +WDL + LY + A +N I+ + F
Sbjct: 183 SLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN-INALVF 241
Query: 504 EPQEGYFL--VTGS----YDMTVKVWSGR---DFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
P Y+L TGS +D+ + DF V S E + SL PD Q++
Sbjct: 242 SPNR-YWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSS-EPECISLTWSPDGQTLF 299
Query: 555 TVSHDRWIKLW 565
+ D I++W
Sbjct: 300 SGWTDNLIRVW 310
Score = 173 (66.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 57/222 (25%), Positives = 104/222 (46%)
Query: 279 DCTES--GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKG-HTERATDVT 335
+CT G + S S D + + S +KIW++ K++ G H++ + V
Sbjct: 96 ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVR 155
Query: 336 FSPVSNHVATSSA--DRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
FSP +++ SA D+ ++W+ + SL + GH ++ + P G + D T
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGT 215
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS-LAASCGLDALARVWDLRTGRSI--LAL 449
LWD++ L E + ++ + F P+ L A+ G + R++DL T + L +
Sbjct: 216 LMLWDLNESTHLYSLEAKA-NINALVFSPNRYWLCAATG--SSIRIFDLETQEKVDELTV 272
Query: 450 E--GHVK----P-VLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+ G K P + +++SP+G L +G DN R+W + K
Sbjct: 273 DFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVTK 314
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 449 LEGHVKPVLGISFSP-NGYHLATGGEDNTCRIWDLRKRKSLYVIP-----AHSNLISQVK 502
LEGH V +S +P N L +G D + +W+L + Y + HS+ +S
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 503 FEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWI 562
+ ++ ++ S+D T+++W + GH + V S+ I PD + + + S D+ I
Sbjct: 71 LS-FDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 563 KLWS 566
K+W+
Sbjct: 130 KIWN 133
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 271 (100.5 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 84/320 (26%), Positives = 139/320 (43%)
Query: 263 DDEIDYALKKVESL--YLDCTE---SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR 317
D E+ ++VE+L ++ T G + + D + +SS G V +W
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 94
Query: 318 LQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLW------NTD-GSLLNTFQGHLD 370
K A+ ++P +A D ++ N + + + H +
Sbjct: 95 TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTN 154
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPD--GSLAAS 428
L+ +F S + T S D T LWDV++G L GH V + P G+ S
Sbjct: 155 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVS 214
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL 488
G D A VWD+R+G+ + A E H + + + P+G A+G +D TCR++DLR + +
Sbjct: 215 GGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREV 274
Query: 489 YVIPAHSNLI--SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ S + S V F G L G D T+ VW V L GHE +V++L +
Sbjct: 275 AIYSKESIIFGASSVDFS-LSGRLLFAGYNDYTINVWDVLKGARVSILFGHENRVSTLRV 333
Query: 547 HPDEQSIATVSHDRWIKLWS 566
PD + + S D +++W+
Sbjct: 334 SPDGTAFCSGSWDHTLRVWA 353
Score = 147 (56.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/212 (23%), Positives = 88/212 (41%)
Query: 364 TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDG 423
T +GH +++ M + + + ++S D +WD T + V A+ P G
Sbjct: 58 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 424 SLAASCGLDALARVWDLRTGRSI-LALEG-----HVKPVLGISFSPNGYHLATGGEDNTC 477
A GLD V+ L ++ +A + H + SF+ + + T D TC
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTC 177
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQE-GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
+WD+ + L H + + P E G V+G D VW R + V++
Sbjct: 178 ALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET 237
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
HE+ + S+ +P + A+ S D +L+ R
Sbjct: 238 HESDINSVRYYPSGDAFASGSDDATCRLYDLR 269
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 294 (108.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 80/292 (27%), Positives = 130/292 (44%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P+ +S +G L T +G +W+ + L+ H + ++ SN S
Sbjct: 135 PVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWA--SNEQWLLS 192
Query: 348 ADRTA--RLWNTDGSLLNTFQGHLDRLAR-MAFHPSGKYLGTTSFDKTWRLWDVDTGVEL 404
AD+ + W + + + F H D R +AF P+ T S D T R+WD E
Sbjct: 193 ADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEE 252
Query: 405 LLQEGHSRSVYGIAFHPDGSLAASCGLDAL--ARVWDLRTGRSILALEGHVKPVLGISFS 462
+ GH V I +HP L A+ D ++WD ++G + L+ H V+ + F+
Sbjct: 253 RVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFN 312
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP-QEGYFLVTGSYDMTVK 521
NG L TGG D+ +++D+R K + AH + + + P EG F V+G D ++
Sbjct: 313 KNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLF-VSGGGDGSIV 371
Query: 522 VWSGRDFKLVKSLS-GHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGD 572
W K + L H+ + S+ HP +AT S+D K W+ GD
Sbjct: 372 YWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGD 423
Score = 234 (87.4 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 66/258 (25%), Positives = 118/258 (45%)
Query: 286 DRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERAT-DVTFSPVSNHVA 344
D + ++ + L ++ G VK W P + H + A + F+P A
Sbjct: 175 DSAIRALKWASNEQWLLSADQGGYVKYWQ-PNMNNAHMFSAHKDEAIRGLAFAPTDVKFA 233
Query: 345 TSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD--KTWRLWDVDTG 401
T+S D TAR+W+ + +GH + + +HP+ + T S D + ++WD +G
Sbjct: 234 TASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSG 293
Query: 402 VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISF 461
L + H SV + F+ +G+ + G D L +++D+R + + H K V+ +++
Sbjct: 294 SCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAW 353
Query: 462 SPNGYHL-ATGGEDNTCRIWDLRKRKSLYVIP-AHSNLISQVKFEPQEGYFLVTGSYDMT 519
P L +GG D + W + K + ++ AH I +K+ P G+ L TGS D
Sbjct: 354 HPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPL-GHILATGSNDNN 412
Query: 520 VKVWS-GRDFKLVKSLSG 536
K W+ R V+ + G
Sbjct: 413 TKFWARNRPGDTVEDIFG 430
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 270 (100.1 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 65/222 (29%), Positives = 117/222 (52%)
Query: 367 GHLDRLARMAFHPSGKYLGTTSFDKTWRLW--DVDTGV-ELLLQEGHSRSVYGIAFHPDG 423
GH DR+ +A+ P+G L + DKT R+W + D + + +L++GH R++ + + P G
Sbjct: 3 GHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 424 SLAASCGLDALARVWDLRTGR--SILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
+ AS DA +WD ++G LEGH V + +S +G LAT G D + IW+
Sbjct: 63 TFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWE 122
Query: 482 LRKR---KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR--DFKLVKSLSG 536
+++ + VI +H+ + +V + P + L + SYD T+K++ D+ +L G
Sbjct: 123 VQEDDEYECASVIHSHTQDVKKVVWHPTKE-ILASCSYDDTIKLYKEDEDDWSCCDTLEG 181
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDV 578
HE+ V S+ I + S D+ +++W + G++ + V
Sbjct: 182 HESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVV 223
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 55/211 (26%), Positives = 96/211 (45%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS--LLNTF--QGHLDRLARMAFHP 379
+ GH +R V +SP +A+ D+T R+W +G + T GH + + + P
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSP 60
Query: 380 SGKYLGTTSFDKTWRLWDVDTG-VEL-LLQEGHSRSVYGIAFHPDGSLAASCGLDALARV 437
G +L + SFD T +WD +G E EGH V + + GSL A+CG D +
Sbjct: 61 CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWI 120
Query: 438 WDLRTG---RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW--DLRKRKSLYVIP 492
W+++ + H + V + + P LA+ D+T +++ D +
Sbjct: 121 WEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLE 180
Query: 493 AHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
H + + + F+ G +V+ S D TV++W
Sbjct: 181 GHESTVWSISFDGS-GDRIVSCSDDKTVRIW 210
Score = 177 (67.4 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 76/297 (25%), Positives = 117/297 (39%)
Query: 282 ESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP--RLQKFSALKGHTERATDVTFSPV 339
E G R + +S G LA++S IW + + L+GH V +S
Sbjct: 46 EDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVS 105
Query: 340 SNHVATSSADRTARLWNT----DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRL 395
+ +AT D++ +W + + H + ++ +HP+ + L + S+D T +L
Sbjct: 106 GSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKL 165
Query: 396 W--DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW-DLRTGRSI-LALEG 451
+ D D EGH +V+ I+F G SC D R+W G + + G
Sbjct: 166 YKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSG 225
Query: 452 -HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYF 510
H K S GYH D T I+D+ K S LI+ + F
Sbjct: 226 KHTKWKCVCVLS--GYH------DRT--IYDVHWSKV-------SGLIATASGDDCIRIF 268
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSL-SGHEAKVTSLDIHP-DEQSIATVSHDRWIKLW 565
+ D F+LV + H V S+ HP DE +AT S D +KLW
Sbjct: 269 KEDTNSDRNQP-----SFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 449 LEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSL---YVIPAHSNLISQVKFEP 505
+ GH V +++SPNG+ LA+ G D T RIW K + + H I + + P
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSP 60
Query: 506 QEGYFLVTGSYDMTVKVWSGR--DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
G FL + S+D T +W + +F+ +L GHE +V S+D +AT D+ +
Sbjct: 61 C-GTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVW 119
Query: 564 LWSTRNKGDEH 574
+W + + DE+
Sbjct: 120 IWEVQ-EDDEY 129
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 279 DCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKF---SALKGHTERATDVT 335
+ T G + + +S G+LLAT V IW + ++ S + HT+ V
Sbjct: 87 NATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVV 146
Query: 336 FSPVSNHVATSSADRTARLWNTDG---SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
+ P +A+ S D T +L+ D S +T +GH + ++F SG + + S DKT
Sbjct: 147 WHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKT 206
Query: 393 WRLW 396
R+W
Sbjct: 207 VRIW 210
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 291 (107.5 bits), Expect = 5.4e-23, P = 5.4e-23
Identities = 76/247 (30%), Positives = 118/247 (47%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T SG LSGC + G+ LATSS +K+W + + + L+GH T+
Sbjct: 397 TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 456
Query: 341 NHVATSSADRTARLWNTDGSLLN-TFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
+ VA++S D T+++W+ + T GH D + + F P L T S DKT +WD
Sbjct: 457 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516
Query: 400 TG-VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
TG E L GH SV F P G + ASC + ++WD R I++++ V P G
Sbjct: 517 TGKCEQSLY-GHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSID--VGPSSG 573
Query: 459 --ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSY 516
++F +G LA + + DL K ++ + H + + V F G L +G
Sbjct: 574 NEVNFDQSGRVLAQASANGIIHLLDL-KSGQIHKLVGHESEVHSVVFS-HLGENLYSGGS 631
Query: 517 DMTVKVW 523
D T+++W
Sbjct: 632 DGTIRLW 638
Score = 289 (106.8 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 73/259 (28%), Positives = 127/259 (49%)
Query: 311 KIWSMPRLQKFSAL---KGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQ 366
++W M L + + L GHT+ + F P + +ATSS D T +LW+ + G T +
Sbjct: 382 RLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLE 441
Query: 367 GHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLA 426
GH + +H G ++ + S D T ++WDV++ GH+ SV I F P ++
Sbjct: 442 GHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNIL 501
Query: 427 ASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRK 486
+ D VWD RTG+ +L GH+ V +F+P G+ +A+ ++WD RK
Sbjct: 502 LTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLI 561
Query: 487 SLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDI 546
+ I + ++V F+ Q G L S + + + + ++ K L GHE++V S+
Sbjct: 562 PIVSIDVGPSSGNEVNFD-QSGRVLAQASANGIIHLLDLKSGQIHK-LVGHESEVHSVVF 619
Query: 547 HPDEQSIATVSHDRWIKLW 565
+++ + D I+LW
Sbjct: 620 SHLGENLYSGGSDGTIRLW 638
Score = 285 (105.4 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 70/212 (33%), Positives = 102/212 (48%)
Query: 358 DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
D L N F+ H ++ + HP YL + S D+ W++ + G LL GH+ + G
Sbjct: 349 DYKLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGC 408
Query: 418 AFHPDGS-LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNT 476
FHP GS LA S G D+ ++WDL G L LEGH V ++ G +A+ D T
Sbjct: 409 CFHPSGSKLATSSG-DSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMT 467
Query: 477 CRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
+IWD+ + Y + H++ ++ ++F P L+T S D T+ VW R K +SL G
Sbjct: 468 SKIWDVNSERCRYTLYGHTDSVNSIEFFPFSN-ILLTASADKTLSVWDARTGKCEQSLYG 526
Query: 537 HEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
H V P IA+ KLW R
Sbjct: 527 HMHSVNDATFTPRGHIIASCDARGVTKLWDFR 558
Score = 280 (103.6 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 64/203 (31%), Positives = 99/203 (48%)
Query: 334 VTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
+ P +++ + S DR ++ G++L T GH D L+ FHPSG L T+S D T
Sbjct: 366 IVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDST 425
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGH 452
+LWD++ G L EGH+ +V+ +H G AS LD +++WD+ + R L GH
Sbjct: 426 IKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGH 485
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
V I F P L T D T +WD R K + H + ++ F P+ G+ +
Sbjct: 486 TDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPR-GHIIA 544
Query: 513 TGSYDMTVKVWSGRDFKLVKSLS 535
+ K+W R KL+ +S
Sbjct: 545 SCDARGVTKLWDFR--KLIPIVS 565
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 48/167 (28%), Positives = 75/167 (44%)
Query: 410 HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLA 469
H V I HP SC D L ++ L G +L GH + G F P+G LA
Sbjct: 359 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 418
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFK 529
T D+T ++WDL K + + H++ + + G F+ + S DMT K+W +
Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSC-GDFVASASLDMTSKIWDVNSER 477
Query: 530 LVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
+L GH V S++ P + T S D+ + +W R E ++
Sbjct: 478 CRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSL 524
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 288 (106.4 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 78/306 (25%), Positives = 140/306 (45%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK----------GHTERAT-DVT---FS 337
C+++ +LLA+ S +IW++ + + GH + DVT ++
Sbjct: 188 CAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 247
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
+AT S D AR+W DG+L +T H + + ++ G Y+ + DKT +WD
Sbjct: 248 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 307
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL 457
TG HS + + + + ASC D V L R + +GH V
Sbjct: 308 AHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVN 366
Query: 458 GISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP--------QEGY 509
I + P+G LA+ +D T +IW +++ ++ + AHS I +K+ P
Sbjct: 367 AIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNI 426
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
L + S+D TV++W + +L+ H+ V S+ PD + +A+ S D+ + +W+T++
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 486
Query: 570 KGDEHA 575
H+
Sbjct: 487 GSLVHS 492
Score = 246 (91.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 67/269 (24%), Positives = 118/269 (43%)
Query: 282 ESGDDRP----LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
E G D P ++ ++ DG LLAT S G +IW+ S L H + ++
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWN 288
Query: 338 PVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
N++ ++ D+T +W+ G F H + + + + + S D +
Sbjct: 289 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVC 347
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
+ + +GH+ V I + P G L ASC D ++W ++ + L+ H K +
Sbjct: 348 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 407
Query: 457 LGISFSPNG---------YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
I +SP G LA+ D+T R+WD+ + ++ + H + V F P +
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP-D 466
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
G +L +GS+D V +W+ + LV S G
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 219 (82.2 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 60/244 (24%), Positives = 107/244 (43%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN----TDGSLLNTFQGHLDR---- 371
K + L+GH ++PVS+ +A+ S D TAR+WN ++G H R
Sbjct: 174 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 233
Query: 372 -------LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS 424
+ + ++ G L T S+D R+W D + L + H ++ + ++ G+
Sbjct: 234 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKKGN 292
Query: 425 LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
S G+D +WD TG + H P L + + N A+ D + L
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGC 351
Query: 485 RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ + H+N ++ +K++P G L + S DMT+K+WS + V L H ++ ++
Sbjct: 352 DRPVKTFQGHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTI 410
Query: 545 DIHP 548
P
Sbjct: 411 KWSP 414
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 62/251 (24%), Positives = 110/251 (43%)
Query: 339 VSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++NH D + + ++L +GH + A++P L + S D T R+W++
Sbjct: 155 INNHSKPMEIDGDVEIPPSKATVL---RGHESEVFICAWNPVSDLLASGSGDSTARIWNL 211
Query: 399 DTG-----VELLLQE-----GH----SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGR 444
+ +L+L+ GH ++ V + ++ DG+L A+ D AR+W G
Sbjct: 212 NENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGN 270
Query: 445 SILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFE 504
L H P+ + ++ G ++ + G D T IWD ++ P HS V +
Sbjct: 271 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW- 329
Query: 505 PQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
Q + S DM + V G D + VK+ GH +V ++ P +A+ S D +K
Sbjct: 330 -QNNTTFASCSTDMCIHVCRLGCD-RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 387
Query: 564 LWSTRNKGDEH 574
+WS + H
Sbjct: 388 IWSMKQDACVH 398
Score = 191 (72.3 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK- 382
+GHT + + P +A+ S D T ++W+ + ++ Q H + + + P+G
Sbjct: 359 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 418
Query: 383 --------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
L + SFD T RLWDV+ GV + H VY +AF PDG AS D
Sbjct: 419 TSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 478
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+W+ ++G + + G + + ++ G + D + + DLRK
Sbjct: 479 VHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLRK 527
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV- 339
T G ++ + G LLA+ S +KIWSM + L+ H++ + +SP
Sbjct: 357 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 340 ---SNH-----VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
SN +A++S D T RLW+ + G ++T H + + +AF P GKYL + SFD
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFD 476
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
K +W+ +G + G + ++ + ++ G + D V DLR
Sbjct: 477 KCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 526
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 288 (106.4 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 78/306 (25%), Positives = 140/306 (45%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK----------GHTERAT-DVT---FS 337
C+++ +LLA+ S +IW++ + + GH + DVT ++
Sbjct: 188 CAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 247
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
+AT S D AR+W DG+L +T H + + ++ G Y+ + DKT +WD
Sbjct: 248 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 307
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL 457
TG HS + + + + ASC D V L R + +GH V
Sbjct: 308 AHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVN 366
Query: 458 GISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP--------QEGY 509
I + P+G LA+ +D T +IW +++ ++ + AHS I +K+ P
Sbjct: 367 AIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNI 426
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
L + S+D TV++W + +L+ H+ V S+ PD + +A+ S D+ + +W+T++
Sbjct: 427 MLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 486
Query: 570 KGDEHA 575
H+
Sbjct: 487 GSLVHS 492
Score = 246 (91.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 67/269 (24%), Positives = 118/269 (43%)
Query: 282 ESGDDRP----LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
E G D P ++ ++ DG LLAT S G +IW+ S L H + ++
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWN 288
Query: 338 PVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
N++ ++ D+T +W+ G F H + + + + + S D +
Sbjct: 289 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVC 347
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
+ + +GH+ V I + P G L ASC D ++W ++ + L+ H K +
Sbjct: 348 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 407
Query: 457 LGISFSPNG---------YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
I +SP G LA+ D+T R+WD+ + ++ + H + V F P +
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP-D 466
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
G +L +GS+D V +W+ + LV S G
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 219 (82.2 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 60/244 (24%), Positives = 107/244 (43%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN----TDGSLLNTFQGHLDR---- 371
K + L+GH ++PVS+ +A+ S D TAR+WN ++G H R
Sbjct: 174 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 233
Query: 372 -------LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS 424
+ + ++ G L T S+D R+W D + L + H ++ + ++ G+
Sbjct: 234 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKKGN 292
Query: 425 LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
S G+D +WD TG + H P L + + N A+ D + L
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGC 351
Query: 485 RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ + H+N ++ +K++P G L + S DMT+K+WS + V L H ++ ++
Sbjct: 352 DRPVKTFQGHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTI 410
Query: 545 DIHP 548
P
Sbjct: 411 KWSP 414
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 62/251 (24%), Positives = 110/251 (43%)
Query: 339 VSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++NH D + + ++L +GH + A++P L + S D T R+W++
Sbjct: 155 INNHSKPMEIDGDVEIPPSKATVL---RGHESEVFICAWNPVSDLLASGSGDSTARIWNL 211
Query: 399 DTG-----VELLLQE-----GH----SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGR 444
+ +L+L+ GH ++ V + ++ DG+L A+ D AR+W G
Sbjct: 212 NENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGN 270
Query: 445 SILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFE 504
L H P+ + ++ G ++ + G D T IWD ++ P HS V +
Sbjct: 271 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW- 329
Query: 505 PQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
Q + S DM + V G D + VK+ GH +V ++ P +A+ S D +K
Sbjct: 330 -QNNTTFASCSTDMCIHVCRLGCD-RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 387
Query: 564 LWSTRNKGDEH 574
+WS + H
Sbjct: 388 IWSMKQDACVH 398
Score = 191 (72.3 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK- 382
+GHT + + P +A+ S D T ++W+ + ++ Q H + + + P+G
Sbjct: 359 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 418
Query: 383 --------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
L + SFD T RLWDV+ GV + H VY +AF PDG AS D
Sbjct: 419 TSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 478
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+W+ ++G + + G + + ++ G + D + + DLRK
Sbjct: 479 VHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLRK 527
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV- 339
T G ++ + G LLA+ S +KIWSM + L+ H++ + +SP
Sbjct: 357 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 340 ---SNH-----VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
SN +A++S D T RLW+ + G ++T H + + +AF P GKYL + SFD
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFD 476
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
K +W+ +G + G + ++ + ++ G + D V DLR
Sbjct: 477 KCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 526
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 290 (107.1 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 79/298 (26%), Positives = 132/298 (44%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPR-------------LQKFSALKGHTERATDVTFSP 338
C+++ +LLA+ S +IW M +QK A + T + ++
Sbjct: 361 CAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNC 420
Query: 339 VSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
+ +AT S D AR+W TDG L +T H + + ++ G Y+ + DKT +WD
Sbjct: 421 DGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDA 480
Query: 399 DTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLG 458
TG HS + + + + A SC D V L I +GH V
Sbjct: 481 STGQCTQQFAFHSAPALDVDWQTNQAFA-SCSTDQRIHVCRLGVNEPIKTFKGHTNEVNA 539
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP--------QEGYF 510
I + P G LA+ +D T +IW + + + + + AHS I +K+ P
Sbjct: 540 IKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLI 599
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
L + S+D TV++W + +L+ H V S+ PD + +A+ S D+ + +WST+
Sbjct: 600 LASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQ 657
Score = 256 (95.2 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 68/266 (25%), Positives = 120/266 (45%)
Query: 282 ESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP-RLQKFSALKGHTERATDVTFSPVS 340
E ++ ++ ++ DG+LLAT S G +IW RL S L H + ++
Sbjct: 406 EVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLA--STLGQHKGPIFALKWNKCG 463
Query: 341 NHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVD 399
N++ ++ D+T +W+ G F H + + + + + S D+ + +
Sbjct: 464 NYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAF-ASCSTDQRIHVCRLG 522
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ +GH+ V I + P G L ASC D ++W + R L+ H K + I
Sbjct: 523 VNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTI 582
Query: 460 SFSPNG---------YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYF 510
+SP G LA+ D+T R+WD+ + ++ + H+ + V F P +G
Sbjct: 583 KWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSP-DGKH 641
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSG 536
L +GS+D V +WS + +LV S G
Sbjct: 642 LASGSFDKCVHIWSTQTGQLVHSYKG 667
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 61/244 (25%), Positives = 108/244 (44%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLW-----NTDGSLL---NTFQ-GHLD 370
K L+GH ++P + +A+ S D TAR+W NT+ + L + Q G +
Sbjct: 347 KARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAE 406
Query: 371 -----RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+ + ++ G L T S+D R+W D + L + H ++ + ++ G+
Sbjct: 407 VPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQ-HKGPIFALKWNKCGNY 465
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR 485
S G+D +WD TG+ H P L + + N A+ D + L
Sbjct: 466 ILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTN-QAFASCSTDQRIHVCRLGVN 524
Query: 486 KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSL 544
+ + H+N ++ +K+ PQ G L + S DMT+K+WS RD + L H ++ ++
Sbjct: 525 EPIKTFKGHTNEVNAIKWCPQ-GQLLASCSDDMTLKIWSMNRD-RCCHDLQAHSKEIYTI 582
Query: 545 DIHP 548
P
Sbjct: 583 KWSP 586
Score = 194 (73.4 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 46/176 (26%), Positives = 78/176 (44%)
Query: 319 QKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAF 377
+ KGHT + + P +A+ S D T ++W+ + + Q H + + +
Sbjct: 525 EPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKW 584
Query: 378 HPSGK---------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAAS 428
P+G L + SFD T RLWDV+ G + H+ VY +AF PDG AS
Sbjct: 585 SPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLAS 644
Query: 429 CGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
D +W +TG+ + + +G + + ++ G + D + + DLRK
Sbjct: 645 GSFDKCVHIWSTQTGQLVHSYKG-TGGIFEVCWNSKGTKVGASASDGSVFVLDLRK 699
Score = 185 (70.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 49/171 (28%), Positives = 85/171 (49%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV- 339
T G ++ + G LLA+ S +KIWSM R + L+ H++ + +SP
Sbjct: 529 TFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTG 588
Query: 340 --SNH------VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
+N+ +A++S D T RLW+ + GS ++T H + + +AF P GK+L + SFD
Sbjct: 589 PGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFD 648
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
K +W TG +L+ + ++ + ++ G+ + D V DLR
Sbjct: 649 KCVHIWSTQTG-QLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFVLDLR 698
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 360 SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV-DTGV---ELLL----QEG-- 409
S +GH + A++PS L + S D T R+WD+ D +L+L Q+G
Sbjct: 346 SKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGA 405
Query: 410 ---HSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
++ V + ++ DGSL A+ D AR+W GR L H P+ + ++ G
Sbjct: 406 EVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLASTLGQHKGPIFALKWNKCGN 464
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
++ + G D T IWD + HS V ++ + + + S D + V
Sbjct: 465 YILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAF--ASCSTDQRIHVCRLG 522
Query: 527 DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+ +K+ GH +V ++ P Q +A+ S D +K+WS
Sbjct: 523 VNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWS 562
Score = 178 (67.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 50/206 (24%), Positives = 87/206 (42%)
Query: 381 GKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL 440
G L T S+D R+W D + L + H ++ + ++ G+ S G+D +WD
Sbjct: 422 GSLLATGSYDGYARIWKTDGRLASTLGQ-HKGPIFALKWNKCGNYILSAGVDKTTIIWDA 480
Query: 441 RTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQ 500
TG+ H P L + + N A+ D + L + + H+N ++
Sbjct: 481 STGQCTQQFAFHSAPALDVDWQTN-QAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNA 539
Query: 501 VKFEPQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQS------- 552
+K+ PQ G L + S DMT+K+WS RD + L H ++ ++ P
Sbjct: 540 IKWCPQ-GQLLASCSDDMTLKIWSMNRD-RCCHDLQAHSKEIYTIKWSPTGPGTNNPNTN 597
Query: 553 --IATVSHDRWIKLWSTRNKGDEHAM 576
+A+ S D ++LW H +
Sbjct: 598 LILASASFDSTVRLWDVERGSCIHTL 623
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 48/184 (26%), Positives = 77/184 (41%)
Query: 397 DVDTGVEL-----LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL---RTGRSILA 448
D+D +E+ + GH V+ A++P L AS D+ AR+WD+ T + L
Sbjct: 336 DIDENIEIPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLV 395
Query: 449 LEGHV----------KPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
L + K V + ++ +G LATG D RIW R + + H I
Sbjct: 396 LRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLAS-TLGQHKGPI 454
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSH 558
+K+ Y L G D T +W + + + H A +D + Q+ A+ S
Sbjct: 455 FALKWNKCGNYILSAG-VDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTN-QAFASCST 512
Query: 559 DRWI 562
D+ I
Sbjct: 513 DQRI 516
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 268 (99.4 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 65/223 (29%), Positives = 109/223 (48%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV---ELLLQEGHSRSVYGI 417
L +T QGH R+ +A+HP G + DK R+W + + +L +GH R++ +
Sbjct: 6 LEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREV 65
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
+ P G AS DA +W LEGH V +S+S +G LAT D +
Sbjct: 66 RWSPCGEYLASASFDATTAIWSKH--ECTATLEGHENEVKSVSWSRSGGLLATCSRDKSV 123
Query: 478 RIWDLR---KRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS----GRDFKL 530
IW++ + + V+ AHS + +V + P + L + SYD T+K+++ D+
Sbjct: 124 WIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE-ILASASYDNTIKMYAESALDSDWDC 182
Query: 531 VKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
+LS H + V S+D D + + + S D +K+W + G+E
Sbjct: 183 TATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNE 225
Score = 228 (85.3 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 57/179 (31%), Positives = 94/179 (52%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR----TGRSILALEGHVKPVLGISFSP 463
+GH ++G+A+HP G+ ASCG D R+W L T ++IL+ +GH + + + +SP
Sbjct: 11 QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILS-DGHKRTIREVRWSP 69
Query: 464 NGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
G +LA+ D T IW K + + H N + V + + G L T S D +V +W
Sbjct: 70 CGEYLASASFDATTAIWS--KHECTATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIW 126
Query: 524 --SGRD-FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDVD 579
+G D F+ L+ H V + HP ++ +A+ S+D IK+++ E A+D D
Sbjct: 127 EVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYA------ESALDSD 179
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 315 MPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNT----FQGHLD 370
M RL L+GH R V + P N A+ D+ R+W+ G+ T GH
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKR 60
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
+ + + P G+YL + SFD T +W L EGH V +++ G L A+C
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSKHECTATL--EGHENEVKSVSWSRSGGLLATCS 118
Query: 431 LDALARVWDLRTGRSI---LALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKS 487
D +W++ L H + V + + P LA+ DNT +++ S
Sbjct: 119 RDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDS 178
Query: 488 LY----VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+ + +H++ + + F+ +G LV+ S D T+K+W
Sbjct: 179 DWDCTATLSSHTSTVWSIDFDA-DGERLVSCSDDATLKIW 217
Score = 190 (71.9 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 57/215 (26%), Positives = 95/215 (44%)
Query: 276 LYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR---LQKFSALKGHTERAT 332
L L+ T G + G ++ GN A+ ++IWS+ K GH
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIR 63
Query: 333 DVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
+V +SP ++A++S D T +W+ T +GH + + +++ SG L T S DK+
Sbjct: 64 EVRWSPCGEYLASASFDATTAIWSKH-ECTATLEGHENEVKSVSWSRSGGLLATCSRDKS 122
Query: 393 WRLWDV--DTGVELL-LQEGHSRSVYGIAFHPDGSLAASCGLDALARVWD---LRTGRSI 446
+W+V D E + HS+ V + +HP + AS D +++ L +
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSDWDC 182
Query: 447 LA-LEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
A L H V I F +G L + +D T +IW
Sbjct: 183 TATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 42/136 (30%), Positives = 65/136 (47%)
Query: 443 GRSIL--ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRK---SLYVIPAHSNL 497
GR IL L+GH + G+++ P G A+ GED RIW L + H
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRT 61
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVS 557
I +V++ P G +L + S+D T +WS + +L GHE +V S+ +AT S
Sbjct: 62 IREVRWSPC-GEYLASASFDATTAIWSKHE--CTATLEGHENEVKSVSWSRSGGLLATCS 118
Query: 558 HDRWIKLWSTRNKGDE 573
D+ + +W GD+
Sbjct: 119 RDKSVWIWEVA--GDD 132
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 268 (99.4 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 63/212 (29%), Positives = 111/212 (52%)
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDV--DTGV-ELLLQEGHSRSVYGIAFHPDGSLAASCGL 431
+A++PSG L + D+ R+W D+ + + +L EGH R+V +A+ P G+ AS
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 432 DALARVWDLRTG--RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR---K 486
DA +W + LEGH V ++++P+G LAT D + +W++ + +
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 487 SLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GRDFKLVKSLSGHEAKVTSL 544
+ V+ +H+ + V + P + L + SYD TVK++ G D+ +L GHE+ V S+
Sbjct: 142 CVSVLSSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSI 200
Query: 545 DIHPDEQSIATVSHDRWIKLWSTRNKGDEHAM 576
P Q +A+ S DR +++W G+E +
Sbjct: 201 AFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Score = 236 (88.1 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 63/207 (30%), Positives = 100/207 (48%)
Query: 288 PLSGC---SYSHDGNLLATSSLSGVVKIWSMPR---LQKFSALKGHTERATDVTFSPVSN 341
P S C +++ G LLA+ ++IW + K +GH V +SP N
Sbjct: 15 PDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN 74
Query: 342 HVATSSADRTARLW--NTDG-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++A++S D T +W N D + T +GH + + +A+ PSG L T S DK+ +W+V
Sbjct: 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134
Query: 399 DTGVE---LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA--LEGHV 453
D E + + H++ V + +HP L AS D +++ + LEGH
Sbjct: 135 DEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHE 194
Query: 454 KPVLGISFSPNGYHLATGGEDNTCRIW 480
V I+F P+G LA+ +D T RIW
Sbjct: 195 STVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 203 (76.5 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPR--LQKFSALKGHTERATDVTFSPVSN 341
G R + ++S GN LA++S IW + + + L+GH V ++P N
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN 118
Query: 342 HVATSSADRTARLWNTDGS----LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW- 396
+AT S D++ +W D ++ H + + +HPS + L + S+D T +L+
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQ 178
Query: 397 -DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVW 438
+ D V EGH +V+ IAF P G ASC D R+W
Sbjct: 179 EEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 153 (58.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKF---SALKGHTERATDVTFS 337
T G + + +++ GNLLAT S V +W + ++ S L HT+ V +
Sbjct: 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWH 159
Query: 338 PVSNHVATSSADRTARLWNTDGS---LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWR 394
P +A++S D T +L+ +G T +GH + +AF PSG+ L + S D+T R
Sbjct: 160 PSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVR 219
Query: 395 LW 396
+W
Sbjct: 220 IW 221
Score = 64 (27.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 410 HSRSVYGIAF-HPDGSLAASCGLDALARVWDLRTGR-------SILA--LEGHVKPVLGI 459
H+R++Y +A+ G+LA +CG DA+ RV++ G S+ A + H + V +
Sbjct: 251 HTRTIYDVAWCQLTGALATACGDDAI-RVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCV 309
Query: 460 SFSPN--GYHLATGGEDNTCRIWDLRKRKSL 488
+++P G LA+ +D W+ + L
Sbjct: 310 AWNPKEPGL-LASCSDDGEVAFWEYHQPAGL 339
Score = 56 (24.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 406 LQEGHSRSVYGIAFHP-DGSLAASCGLDALARVWD 439
L++ HS+ V +A++P + L ASC D W+
Sbjct: 298 LRQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWE 332
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 268 (99.4 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 69/235 (29%), Positives = 120/235 (51%)
Query: 361 LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW---DVDTGV-ELLLQEGHSRSVYG 416
LL T GH R+ A+HP GK + DKT R+W D D V + +L +GH+R++
Sbjct: 6 LLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRE 65
Query: 417 IAFHPDGSLAASCGLDALARVWDLRTGR--SILALEGHVKPVLGISFSPNGYHLATGGED 474
+A+ G AS D VWD ++G LEGH V +++S +G LAT D
Sbjct: 66 LAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRD 125
Query: 475 NTCRIWDLRK---RKSLY----VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW---- 523
+ IW++ ++ Y V+ H+ + +V + PQE L + SYD T++++
Sbjct: 126 KSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQED-LLASASYDNTIRMYRQDL 184
Query: 524 SGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHAMDV 578
+ ++++++ L H + V S+ Q +A+ S D +K+W + G ++A+ +
Sbjct: 185 ADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVW--QQYGPDNALGI 237
Score = 190 (71.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 51/180 (28%), Positives = 78/180 (43%)
Query: 315 MPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN---TDGSLLNTF--QGHL 369
M +L+ L GH R + P A+ D+T R+WN TD + T GH
Sbjct: 1 MGKLELLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHT 60
Query: 370 DRLARMAFHPSGKYLGTTSFDKTWRLWDVDTG-VEL-LLQEGHSRSVYGIAFHPDGSLAA 427
+ +A+ G YL + SFD T +WD +G E EGH V + + G+L A
Sbjct: 61 RTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLA 120
Query: 428 SCGLDALARVWDLRTG-------RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW 480
+C D +W++ + L GH + V + + P LA+ DNT R++
Sbjct: 121 TCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMY 180
Score = 183 (69.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 80/305 (26%), Positives = 125/305 (40%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP--RLQKFSALKGHTERATDVTFSPVSN 341
G R + ++S G+ LA++S V +W + + L+GH VT+S N
Sbjct: 58 GHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGN 117
Query: 342 HVATSSADRTARLWNT--------DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTW 393
+AT S D++ +W + + GH + ++ +HP L + S+D T
Sbjct: 118 LLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTI 177
Query: 394 RLW--DV-DTGVELLLQ-EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
R++ D+ D+ E+L E HS +V+ I+F G ASC D +VW + G
Sbjct: 178 RMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQ-QYGPD---- 232
Query: 450 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGY 509
LGI G IW S Y HS + + + Q G
Sbjct: 233 -----NALGIPCPDRG------------TIWKCVCTLSGY----HSRSVYDIDWCKQTG- 270
Query: 510 FLVTGSYDMTVKVW-----SGRD---FKLVKSLSGHEAKVTSLDIHPDEQSIA-TVSHDR 560
L T D TV+++ S R+ F+LV ++ H + HP + T S D
Sbjct: 271 LLATACGDDTVRIFREASDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDG 330
Query: 561 WIKLW 565
IKLW
Sbjct: 331 EIKLW 335
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 73/284 (25%), Positives = 118/284 (41%)
Query: 261 SIDDEIDYALKKVESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM---P- 316
S D + KK + T G D + ++S GNLLAT S V IW + P
Sbjct: 79 SFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPD 138
Query: 317 ---RLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-----GSLLNTFQGH 368
+ + L GHT+ V + P + +A++S D T R++ D +L + H
Sbjct: 139 QEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLADSEWEMLEPLESH 198
Query: 369 LDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAAS 428
+ ++F +G+ L + S D T ++W Q+ YG PD +L
Sbjct: 199 SSTVWSISFDATGQRLASCSEDTTVKVW----------QQ------YG----PDNALGIP 238
Query: 429 CGLDALARVWDLRTGRSILALEG-HVKPVLGISFSPNGYHLATGGEDNTCRIW----DLR 483
C D +W + + L G H + V I + LAT D+T RI+ D
Sbjct: 239 CP-DR-GTIW-----KCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREASDSD 291
Query: 484 KRKSLY----VIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
+ + + + AHS ++V + P L+T S D +K+W
Sbjct: 292 RNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLW 335
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 268 (99.4 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 84/295 (28%), Positives = 140/295 (47%)
Query: 276 LYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVT 335
L L+ +G D ++ +S DG L T++ GV +W+ + L+G +
Sbjct: 39 LNLERQFTGSDVAINRIHFSPDGQFLLTAAADGVGTLWTKEG-EMLGQLQGQKPPMFNAR 97
Query: 336 FSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRL 395
SP + T+ D T RLWN G LL Q H +A F P + + T S D ++
Sbjct: 98 LSPDRQILITTGYDGTIRLWNLQGELLEEQQPHRAAVADAIFSPDSQIIVTCSDDGQTKI 157
Query: 396 WDVDTGVEL--LLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDL--RTGRSILALEG 451
+ G E+ +L+ G +R+ +A+HP G L AS + + + R I +G
Sbjct: 158 F-TRQGQEIASVLKSGTARN---LAYHPQGLLIASVSDSGSLHLINPNGKIEREISTGQG 213
Query: 452 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKR--KSLYVIPAHSNLISQVKFEPQEGY 509
+ ++FSPNG L T G + + ++W+L V+P + ++ +F P+ G
Sbjct: 214 RIN---NVNFSPNGEQLLTSGINGSAKLWNLAGELIHEYKVVP--TGWVNSAQFYPK-GE 267
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPD-EQSIATVSHDR-WI 562
+L T S D T++ W +D +L+ L A++TSL PD +Q AT S + W+
Sbjct: 268 WLATASDDGTIRFWQ-KDGQLIYELPLVNARLTSLSFSPDGKQLAATSSQGQVWV 321
Score = 194 (73.4 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 73/281 (25%), Positives = 126/281 (44%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTER---ATDVT-----FSPVSNHVATSSADRT 351
L+ ++ VK+ S P + + S +K + ER +DV FSP + T++AD
Sbjct: 15 LIKEEIVTAEVKV-SAPVVNQ-SGIKLNLERQFTGSDVAINRIHFSPDGQFLLTAAADGV 72
Query: 352 ARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHS 411
LW +G +L QG + P + L TT +D T RLW++ G L Q+ H
Sbjct: 73 GTLWTKEGEMLGQLQGQKPPMFNARLSPDRQILITTGYDGTIRLWNLQ-GELLEEQQPHR 131
Query: 412 RSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL--EGHVKPVLGISFSPNGYHLA 469
+V F PD + +C D +++ R G+ I ++ G + +++ P G +A
Sbjct: 132 AAVADAIFSPDSQIIVTCSDDGQTKIFT-RQGQEIASVLKSGTAR---NLAYHPQGLLIA 187
Query: 470 TGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS--GR- 526
+ + + + + K I I+ V F P G L+T + + K+W+ G
Sbjct: 188 SVSDSGSLHLIN-PNGKIEREISTGQGRINNVNFSPN-GEQLLTSGINGSAKLWNLAGEL 245
Query: 527 --DFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
++K+V + G V S +P + +AT S D I+ W
Sbjct: 246 IHEYKVVPT--GW---VNSAQFYPKGEWLATASDDGTIRFW 281
Score = 153 (58.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 54/239 (22%), Positives = 108/239 (45%)
Query: 334 VTFSP--VSNHVATSSADRTARLWNTDGSLLNT---FQGHLDRLARMAFHPSGKYLGTTS 388
+TFS + + T+ +A + N G LN F G + R+ F P G++L T +
Sbjct: 9 LTFSLFLIKEEIVTAEVKVSAPVVNQSGIKLNLERQFTGSDVAINRIHFSPDGQFLLTAA 68
Query: 389 FDKTWRLWDVDTGVELLLQ-EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSIL 447
D LW + G E+L Q +G ++ PD + + G D R+W+L+ G +
Sbjct: 69 ADGVGTLWTKE-G-EMLGQLQGQKPPMFNARLSPDRQILITTGYDGTIRLWNLQ-GELLE 125
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
+ H V FSP+ + T +D +I+ + ++ V+ S + + PQ
Sbjct: 126 EQQPHRAAVADAIFSPDSQIIVTCSDDGQTKIFTRQGQEIASVLK--SGTARNLAYHPQ- 182
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
G + + S ++ + + K+ + +S + ++ +++ P+ + + T + KLW+
Sbjct: 183 GLLIASVSDSGSLHLINPNG-KIEREISTGQGRINNVNFSPNGEQLLTSGINGSAKLWN 240
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 459 ISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDM 518
I FSP+G L T D +W ++ + L + + + P + TG YD
Sbjct: 55 IHFSPDGQFLLTAAADGVGTLWT-KEGEMLGQLQGQKPPMFNARLSPDRQILITTG-YDG 112
Query: 519 TVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDEHA 575
T+++W+ + +L++ H A V PD Q I T S D K++ TR +G E A
Sbjct: 113 TIRLWNLQG-ELLEEQQPHRAAVADAIFSPDSQIIVTCSDDGQTKIF-TR-QGQEIA 166
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 268 (99.4 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 74/264 (28%), Positives = 122/264 (46%)
Query: 324 LKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLN--TFQGHLDRLARMAFHPSG 381
L GH F P + +A++ DR LW+ G N T +GH + + ++ G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 382 KYLGTTSFDKTWRLWDVDTGVELLLQEGHS---RSVYGIAFHPDGSLAASCGLDALARVW 438
L + S DKT +WD +TG + +GH+ S Y P L + D ++W
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 180
Query: 439 DLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLI 498
D+R +I + + VL ++F+ + +GG DN ++WDLR+ K Y + H++ +
Sbjct: 181 DIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 499 SQVKFEPQEGYFLVTGSYDMTVKVWSGRDF----KLVKSLSGH----EAKVTSLDIHPDE 550
+ + EG +L++ + D TV+VW R F + VK G+ E + PD
Sbjct: 240 TGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 551 QSIATVSHDRWIKLW---STRNKG 571
IA S D ++ W S R+ G
Sbjct: 299 SKIAAGSADSFLYPWHSLSVRSLG 322
Score = 244 (91.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 69/291 (23%), Positives = 132/291 (45%)
Query: 283 SGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSM-PRLQKFSALKGHTERATDVTFSPVSN 341
SG + + C + +G+ LA++ ++ +WS+ ++ LKGH+ ++ ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGS 123
Query: 342 HVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTT-SFDKTWRLWDVD 399
+ ++S D+T +W+++ G + +GH + G L T S D T +LWD+
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 400 TGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGI 459
+ + ++ V + F+ S G+D +VWDLR + + GH V G+
Sbjct: 184 KKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 460 SFSPNGYHLATGGEDNTCRIWDLR----KRKSLYVIPA--HS---NLISQVKFEPQEGYF 510
S S G +L + DNT R+WD+R K + + + H+ NL+ + + P +G
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL-RCSWSP-DGSK 300
Query: 511 LVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQ-SIATVSHDR 560
+ GS D + W + + + H + P E I + S D+
Sbjct: 301 IAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDK 351
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILA-LEGHVKPVLGISFS 462
++L GH VY FHP+GS AS G D L +W + A L+GH V+ + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN 119
Query: 463 PNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV-TGSYDMTVK 521
+G L + D T +WD + + + H++ ++ + + G LV TGS D TVK
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVK 178
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTR-NK 570
+W R +++ + +V ++ + I + D IK+W R NK
Sbjct: 179 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 289 (106.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/285 (24%), Positives = 127/285 (44%)
Query: 288 PLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSS 347
P++ S++ +G L T S SG +W+ + L+ H + +S + + +
Sbjct: 127 PINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 348 ADRTARLWNTDGSLLNTFQGH-LDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLL 406
+ W + + + F+ H ++ ++F P+ L + + DK ++WD E
Sbjct: 187 DSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQ 246
Query: 407 QEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGY 466
GH V +++HP SL S G D ++WD ++ ++I L GH V + ++ NG
Sbjct: 247 LVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGN 306
Query: 467 HLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS-G 525
+ + D +++D+R K + H ++ + P V+G D + W G
Sbjct: 307 WIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVG 366
Query: 526 RDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNK 570
+ S H+A V SL HP +A+ S+D K WS RN+
Sbjct: 367 NPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWS-RNR 410
Score = 222 (83.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 57/245 (23%), Positives = 109/245 (44%)
Query: 286 DRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTE-RATDVTFSPVSNHVA 344
D + +SH+ + + + SG +K W P + K H + + ++FSP +A
Sbjct: 167 DSAVRSIIWSHNEDWMVSGDDSGNIKYWQ-PNMNNVKIFKAHEQSKIRGLSFSPTDLKLA 225
Query: 345 TSSADRTARLWNTDGSLL-NTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVE 403
+ + D+ ++W+ N GH + +++HP + + D ++WD +
Sbjct: 226 SCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQN 285
Query: 404 LLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSP 463
+ GH +V + ++ +G+ S D L +V+D+RT + + +GH K V ++ P
Sbjct: 286 ITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHP 345
Query: 464 NGYH---LATGGEDNTCRIWDL-RKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMT 519
YH +G +D W + + AH + + + P G+ L +GS D T
Sbjct: 346 --YHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPI-GHILASGSNDHT 402
Query: 520 VKVWS 524
K WS
Sbjct: 403 TKFWS 407
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 286 (105.7 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 79/260 (30%), Positives = 120/260 (46%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T SGD S C +S DG LLAT + +++IW + + L+GH + + F P
Sbjct: 251 TASGDLYIRSVC-FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 341 NHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
+ + + S DR+ R+W+ S + D + +A P GK + S D+T R+WD T
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 401 G--VELLLQ-----EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI------L 447
G VE L GH SVY +AF +G AS LD ++W L G+S +
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE-GKSDKKSTCEV 428
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF---- 503
GH VL + +P+ ++ +G +D WD L ++ H N + V
Sbjct: 429 TYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNS 488
Query: 504 EPQEGYFLVTGSYDMTVKVW 523
+ EG F TGS D ++W
Sbjct: 489 KGTEGIF-ATGSGDCKARIW 507
Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 77/257 (29%), Positives = 115/257 (44%)
Query: 334 VTFSPVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V FSP +AT + D+ R+W+ ++ +GH + + F P G L + S D++
Sbjct: 261 VCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRS 320
Query: 393 WRLWDVDTG---VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
R+WD+ T + L +++G V +A PDG L A+ LD RVWD TG + L
Sbjct: 321 VRIWDLRTSQCSLTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 450 E-------GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR---KRKSLYVIP--AHSNL 497
+ GH V ++FS NG +A+G D T ++W L +KS + H +
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDF 436
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKV----TSLDIHPDEQSI 553
+ V P Y L +GS D V W + L GH V SL+ E
Sbjct: 437 VLSVCCTPDNEYIL-SGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 554 ATVSHDRWIKLWSTRNK 570
AT S D ++W K
Sbjct: 496 ATGSGDCKARIWKWTKK 512
Score = 249 (92.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 86/287 (29%), Positives = 130/287 (45%)
Query: 293 SYSHDGNLLATSSL--SGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
++S D ++ SL S VV R KF A G + T V F+ + + D
Sbjct: 184 AFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIAT-G-CNKTTQV-FNVTTGELVAKLIDE 240
Query: 351 TARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
++ N D + T G L + + F P GK L T + DK R+WD+ T + + GH
Sbjct: 241 SSNE-NKDDN--TTASGDL-YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGH 296
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+ +Y + F PDG S D R+WDLRT + L L V ++ SP+G +A
Sbjct: 297 EQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAA 355
Query: 471 GGEDNTCRIWDLRKRKSLYVIPA-------HSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
G D T R+WD + + + H + + V F G + +GS D TVK+W
Sbjct: 356 GSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFS-NNGEQIASGSLDRTVKLW 414
Query: 524 --SGR-DFKLVKSLS--GHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
G+ D K ++ GH+ V S+ PD + I + S DR + W
Sbjct: 415 HLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFW 461
Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 58/167 (34%), Positives = 83/167 (49%)
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ + F PDG L A+ D L R+WDL T R I L GH + + + F P+G L +G
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
D + RIWDLR + + ++ V P +G + GS D TV+VW LV+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP-DGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 534 L-------SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
L +GHE V S+ + + IA+ S DR +KLW K D+
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDK 422
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 286 (105.7 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 79/260 (30%), Positives = 120/260 (46%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T SGD S C +S DG LLAT + +++IW + + L+GH + + F P
Sbjct: 251 TASGDLYIRSVC-FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 341 NHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDT 400
+ + + S DR+ R+W+ S + D + +A P GK + S D+T R+WD T
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 401 G--VELLLQ-----EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSI------L 447
G VE L GH SVY +AF +G AS LD ++W L G+S +
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE-GKSDKKSTCEV 428
Query: 448 ALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKF---- 503
GH VL + +P+ ++ +G +D WD L ++ H N + V
Sbjct: 429 TYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNS 488
Query: 504 EPQEGYFLVTGSYDMTVKVW 523
+ EG F TGS D ++W
Sbjct: 489 KGTEGIF-ATGSGDCKARIW 507
Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 77/257 (29%), Positives = 115/257 (44%)
Query: 334 VTFSPVSNHVATSSADRTARLWNTDGS-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V FSP +AT + D+ R+W+ ++ +GH + + F P G L + S D++
Sbjct: 261 VCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRS 320
Query: 393 WRLWDVDTG---VELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILAL 449
R+WD+ T + L +++G V +A PDG L A+ LD RVWD TG + L
Sbjct: 321 VRIWDLRTSQCSLTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 450 E-------GHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR---KRKSLYVIP--AHSNL 497
+ GH V ++FS NG +A+G D T ++W L +KS + H +
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDF 436
Query: 498 ISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKV----TSLDIHPDEQSI 553
+ V P Y L +GS D V W + L GH V SL+ E
Sbjct: 437 VLSVCCTPDNEYIL-SGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 554 ATVSHDRWIKLWSTRNK 570
AT S D ++W K
Sbjct: 496 ATGSGDCKARIWKWTKK 512
Score = 249 (92.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 86/287 (29%), Positives = 130/287 (45%)
Query: 293 SYSHDGNLLATSSL--SGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADR 350
++S D ++ SL S VV R KF A G + T V F+ + + D
Sbjct: 184 AFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIAT-G-CNKTTQV-FNVTTGELVAKLIDE 240
Query: 351 TARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGH 410
++ N D + T G L + + F P GK L T + DK R+WD+ T + + GH
Sbjct: 241 SSNE-NKDDN--TTASGDL-YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGH 296
Query: 411 SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT 470
+ +Y + F PDG S D R+WDLRT + L L V ++ SP+G +A
Sbjct: 297 EQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAA 355
Query: 471 GGEDNTCRIWDLRKRKSLYVIPA-------HSNLISQVKFEPQEGYFLVTGSYDMTVKVW 523
G D T R+WD + + + H + + V F G + +GS D TVK+W
Sbjct: 356 GSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFS-NNGEQIASGSLDRTVKLW 414
Query: 524 --SGR-DFKLVKSLS--GHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
G+ D K ++ GH+ V S+ PD + I + S DR + W
Sbjct: 415 HLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFW 461
Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 58/167 (34%), Positives = 83/167 (49%)
Query: 414 VYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 473
+ + F PDG L A+ D L R+WDL T R I L GH + + + F P+G L +G
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 474 DNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKS 533
D + RIWDLR + + ++ V P +G + GS D TV+VW LV+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP-DGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 534 L-------SGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE 573
L +GHE V S+ + + IA+ S DR +KLW K D+
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDK 422
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 286 (105.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 77/300 (25%), Positives = 138/300 (46%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK----------GHTERAT-DVT---FS 337
C+++ +LLA+ S +IW++ + + GH + DVT ++
Sbjct: 184 CAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 243
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
+AT S D AR+W DG+L +T H + + ++ G Y+ + DKT +WD
Sbjct: 244 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 303
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL 457
TG HS + + + + ASC D V L R + +GH V
Sbjct: 304 AHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVN 362
Query: 458 GISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP--------QEGY 509
I + P+G LA+ +D T +IW +++ ++ + AHS I +K+ P
Sbjct: 363 AIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNI 422
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
L + S+D TV++W + +L+ H+ V S+ PD + +A+ S D+ + +W+T++
Sbjct: 423 MLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 482
Score = 243 (90.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 67/269 (24%), Positives = 118/269 (43%)
Query: 282 ESGDDRP----LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
E G D P ++ ++ DG LLAT S G +IW+ S L H + ++
Sbjct: 226 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWN 284
Query: 338 PVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
N++ ++ D+T +W+ G F H + + + + + S D +
Sbjct: 285 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVC 343
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
+ + +GH+ V I + P G L ASC D ++W ++ + L+ H K +
Sbjct: 344 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEI 403
Query: 457 LGISFSPNG---------YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
I +SP G LA+ D+T R+WD+ + ++ + H + V F P +
Sbjct: 404 YTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSP-D 462
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
G +L +GS+D V +W+ + LV S G
Sbjct: 463 GKYLASGSFDKCVHIWNTQSGTLVHSYRG 491
Score = 220 (82.5 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 64/244 (26%), Positives = 107/244 (43%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFH 378
K + L+GH ++PVS+ +A+ S D TAR+WN + S + Q L R H
Sbjct: 170 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGH 229
Query: 379 --PSGK------------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS 424
PS K L T S+D R+W D + L + H ++ + ++ G+
Sbjct: 230 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKKGN 288
Query: 425 LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
S G+D +WD TG + H P L + + N A+ D + L
Sbjct: 289 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGC 347
Query: 485 RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ + H+N ++ +K++P G L + S DMT+K+WS + V L H ++ ++
Sbjct: 348 DRPVKTFQGHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTI 406
Query: 545 DIHP 548
P
Sbjct: 407 KWSP 410
Score = 195 (73.7 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK- 382
+GHT + + P +A+ S D T ++W+ + ++ Q H + + + P+G
Sbjct: 355 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPG 414
Query: 383 --------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
L + SFD T RLWDVD GV + H VY +AF PDG AS D
Sbjct: 415 TSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 474
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+W+ ++G + + G + + ++ G + D + + DLRK
Sbjct: 475 VHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLRK 523
Score = 177 (67.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 49/171 (28%), Positives = 81/171 (47%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV- 339
T G ++ + G LLA+ S +KIWSM + L+ H++ + +SP
Sbjct: 353 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 412
Query: 340 ---SNH-----VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
SN +A++S D T RLW+ D G ++T H + + +AF P GKYL + SFD
Sbjct: 413 PGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFD 472
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
K +W+ +G + G + ++ + ++ G + D V DLR
Sbjct: 473 KCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 522
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 74/291 (25%), Positives = 127/291 (43%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G ++ ++ D T SL G + IW K + + V FSP N V
Sbjct: 57 GHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFV 116
Query: 344 ATSSADRTARLW---NTDGS----LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
A D ++ N D S ++ G+ L+ F G +L T S D W
Sbjct: 117 ACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDG-HLITGSGDMKICHW 175
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
D++ GV+ + GH+ + G++ PD + +D A++WD+R GH V
Sbjct: 176 DLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDV 235
Query: 457 LGISFSPNGYHLATGGEDNTCRIWDLRKRKSL--YVIPAHSNLISQVKFEPQEGYFLVTG 514
+ + P+G+ A+ ED T R++DLR + + Y P + + G +L+ G
Sbjct: 236 SSVCYHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTS-GRYLMCG 294
Query: 515 SYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ V W + +LSGHE ++T + + P+ +A+ S D+ ++LW
Sbjct: 295 GIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGMCLASTSWDQQVRLW 345
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 60/222 (27%), Positives = 100/222 (45%)
Query: 315 MPRLQKFSA---LKGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLD 370
+P++ +FS+ LKGH + V F+ S H T S D +W+T + +
Sbjct: 44 VPKI-RFSSKKILKGHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSA 102
Query: 371 RLARMAFHPSGKYLGTTSFDKTWRLWDVD----TGVELLLQE--GHSRSVYGIAFHPDGS 424
+ +AF PSG ++ D ++DV+ +GV +++E G+ + F DG
Sbjct: 103 WVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGH 162
Query: 425 LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
L G D WDL G + GH + G+S SP+ TG D T ++WD+R+
Sbjct: 163 LITGSG-DMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVRE 221
Query: 485 RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGR 526
+ H +S V + P G+ + S D T +++ R
Sbjct: 222 EGHKQMFFGHDMDVSSVCYHPS-GFGFASCSEDQTARMYDLR 262
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 51/182 (28%), Positives = 82/182 (45%)
Query: 408 EGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYH 467
+GH V + F D + LD +WD T + + V+ ++FSP+G
Sbjct: 56 KGHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNF 115
Query: 468 LATGGEDNTCRIWDLRKR------KSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVK 521
+A GG DN C ++D+ R K + + + +S +F +G+ L+TGS DM +
Sbjct: 116 VACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFL-DDGH-LITGSGDMKIC 173
Query: 522 VWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKGDE-----HAM 576
W +GH + L + PD ++ T S D+ KLW R +G + H M
Sbjct: 174 HWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDM 233
Query: 577 DV 578
DV
Sbjct: 234 DV 235
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 57/211 (27%), Positives = 95/211 (45%)
Query: 366 QGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSL 425
+GH++++ + F ++ T S D +WD T ++ + S V +AF P G+
Sbjct: 56 KGHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNF 115
Query: 426 AASCGLDALARVWDLRTGRSILALEGHVKPVLGIS-------FSPNGYHLATG-GEDNTC 477
A G+D V+D+ R + VK ++G F +G HL TG G+ C
Sbjct: 116 VACGGMDNQCTVYDVNN-RDASGVAKMVKELMGYEGFLSSCRFLDDG-HLITGSGDMKIC 173
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
WDL K H+ I+ + P + +TGS D T K+W R+ + GH
Sbjct: 174 H-WDLEKGVKTMDFNGHAGDIAGLSLSPDMKTY-ITGSVDKTAKLWDVREEGHKQMFFGH 231
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLWSTR 568
+ V+S+ HP A+ S D+ +++ R
Sbjct: 232 DMDVSSVCYHPSGFGFASCSEDQTARMYDLR 262
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 48/156 (30%), Positives = 69/156 (44%)
Query: 422 DGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 481
D +LA CG D + V +R + L+GH+ V + F+ + H TG D IWD
Sbjct: 31 DCTLADKCG-D-MGDVPKIRFSSKKI-LKGHINKVNSVHFAGDSRHCVTGSLDGKLIIWD 87
Query: 482 LRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVW--SGRDF----KLVKSLS 535
+ +IP S + V F P G F+ G D V+ + RD K+VK L
Sbjct: 88 TWTANKVQIIPLRSAWVMTVAFSPS-GNFVACGGMDNQCTVYDVNNRDASGVAKMVKELM 146
Query: 536 GHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
G+E ++S D+ + T S D I W KG
Sbjct: 147 GYEGFLSSCRFL-DDGHLITGSGDMKICHWDLE-KG 180
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 286 (105.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 78/306 (25%), Positives = 140/306 (45%)
Query: 292 CSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALK----------GHTERAT-DVT---FS 337
C+++ +LLA+ S +IW++ + + GH + DVT ++
Sbjct: 189 CAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 248
Query: 338 PVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWD 397
+AT S D AR+W DG+L +T H + + ++ G Y+ + DKT +WD
Sbjct: 249 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWD 308
Query: 398 VDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVL 457
TG HS + + + + ASC D V L R + +GH V
Sbjct: 309 AHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVN 367
Query: 458 GISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEP--------QEGY 509
I + P+G LA+ +D T +IW +++ ++ + AHS I +K+ P
Sbjct: 368 AIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSI 427
Query: 510 FLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRN 569
L + S+D TV++W + +L+ H+ V S+ PD + +A+ S D+ + +W+T++
Sbjct: 428 MLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 487
Query: 570 KGDEHA 575
H+
Sbjct: 488 GSLVHS 493
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 68/269 (25%), Positives = 118/269 (43%)
Query: 282 ESGDDRP----LSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFS 337
E G D P ++ ++ DG LLAT S G +IW+ S L H + ++
Sbjct: 231 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWN 289
Query: 338 PVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLW 396
N++ ++ D+T +W+ G F H + + + + + S D +
Sbjct: 290 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVC 348
Query: 397 DVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPV 456
+ + +GH+ V I + P G L ASC D ++W ++ + L+ H K +
Sbjct: 349 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEI 408
Query: 457 LGISFSPNG---------YHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQE 507
I +SP G LA+ D+T R+WD+ + L+ + H + V F P +
Sbjct: 409 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSP-D 467
Query: 508 GYFLVTGSYDMTVKVWSGRDFKLVKSLSG 536
G +L +GS+D V +W+ + LV S G
Sbjct: 468 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 496
Score = 219 (82.2 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 60/244 (24%), Positives = 107/244 (43%)
Query: 320 KFSALKGHTERATDVTFSPVSNHVATSSADRTARLWN----TDGSLLNTFQGHLDR---- 371
K + L+GH ++PVS+ +A+ S D TAR+WN ++G H R
Sbjct: 175 KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGH 234
Query: 372 -------LARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGS 424
+ + ++ G L T S+D R+W D + L + H ++ + ++ G+
Sbjct: 235 DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKKGN 293
Query: 425 LAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
S G+D +WD TG + H P L + + N A+ D + L
Sbjct: 294 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGC 352
Query: 485 RKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSL 544
+ + H+N ++ +K++P G L + S DMT+K+WS + V L H ++ ++
Sbjct: 353 DRPVKTFQGHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTI 411
Query: 545 DIHP 548
P
Sbjct: 412 KWSP 415
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGK- 382
+GHT + + P +A+ S D T ++W+ + ++ Q H + + + P+G
Sbjct: 360 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPA 419
Query: 383 --------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
L + SFD T RLWDV+ GV L H VY +AF PDG AS D
Sbjct: 420 TSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 479
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK 484
+W+ ++G + + G + + ++ G + D + + DLRK
Sbjct: 480 VHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLRK 528
Score = 191 (72.3 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 61/245 (24%), Positives = 109/245 (44%)
Query: 339 VSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDV 398
++NH D + + ++L +GH + A++P L + S D T R+W++
Sbjct: 156 INNHSKPMEIDGDVEIPPSKATVL---RGHESEVFICAWNPVSDLLASGSGDSTARIWNL 212
Query: 399 DTG-----VELLLQE-----GH----SRSVYGIAFHPDGSLAASCGLDALARVWDLRTGR 444
+ +L+L+ GH ++ V + ++ DG+L A+ D AR+W G
Sbjct: 213 NENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGN 271
Query: 445 SILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFE 504
L H P+ + ++ G ++ + G D T IWD ++ P HS V +
Sbjct: 272 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW- 330
Query: 505 PQEGYFLVTGSYDMTVKVWS-GRDFKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIK 563
Q + S DM + V G D + VK+ GH +V ++ P +A+ S D +K
Sbjct: 331 -QNNTTFASCSTDMCIHVCRLGCD-RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 388
Query: 564 LWSTR 568
+WS +
Sbjct: 389 IWSMK 393
Score = 173 (66.0 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 49/171 (28%), Positives = 81/171 (47%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPV- 339
T G ++ + G LLA+ S +KIWSM + L+ H++ + +SP
Sbjct: 358 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 417
Query: 340 ---SNH-----VATSSADRTARLWNTD-GSLLNTFQGHLDRLARMAFHPSGKYLGTTSFD 390
SN +A++S D T RLW+ + G L+T H + + +AF P GKYL + SFD
Sbjct: 418 PATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFD 477
Query: 391 KTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLR 441
K +W+ +G + G + ++ + ++ G + D V DLR
Sbjct: 478 KCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 527
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 281 (104.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 77/268 (28%), Positives = 122/268 (45%)
Query: 299 NLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD 358
+L+ ++S +K+W + LKGHT D+ F N +A+ SAD T +LW+
Sbjct: 119 SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQ 178
Query: 359 G-SLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
+ T GH ++ + F PSG L ++S DKT ++W+ TG + GH V I
Sbjct: 179 TYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKI 238
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
DGS ASC D + W++ G + H V ++FS G +T
Sbjct: 239 TVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLST- 297
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
+ KS NL+ Q GY L TGS D T+K+W + + + GH
Sbjct: 298 -----PEGKSKVKQGPGGNLVGQC------GY-LATGSRDKTIKIWELATGRCLATYIGH 345
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ V ++ HP + + +V D+ I++W
Sbjct: 346 DNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 273 (101.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 81/294 (27%), Positives = 131/294 (44%)
Query: 274 ESLYLDCTESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATD 333
ES + T G + + GNLLA+ S +K+W L GH +
Sbjct: 136 ESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSC 195
Query: 334 VTFSPVSNHVATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKT 392
V F+P + + +SS D+T ++W G + T GH D + ++ G + + S D+T
Sbjct: 196 VRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQT 255
Query: 393 WRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGH 452
+ W++ G L HS V +AF A+ +D + G+S + +G
Sbjct: 256 IKTWNIVKGECLATYREHSHVVECLAFS-----TANI-IDIPGSLLSTPEGKSKVK-QGP 308
Query: 453 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLV 512
++G GY LATG D T +IW+L + L H N + V+F P G FL+
Sbjct: 309 GGNLVGQC----GY-LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC-GKFLL 362
Query: 513 TGSYDMTVKVWSGRDFKLVKSLS-GHEAKVTSLDIHPDEQSIATVSHDRWIKLW 565
+ D T++VW + +K+++ H ++ LD IAT D IK+W
Sbjct: 363 SVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 254 (94.5 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 54/158 (34%), Positives = 79/158 (50%)
Query: 409 GHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 468
GH + + FHP SL S DA +VWD +G L+GH V I F G L
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 469 ATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDF 528
A+ D T ++WD + + + H + +S V+F P G L++ S D T+KVW
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS-GDQLISSSRDKTIKVWEAATG 222
Query: 529 KLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWS 566
+K+L GHE V + + D IA+ S+D+ IK W+
Sbjct: 223 YCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 74/267 (27%), Positives = 118/267 (44%)
Query: 267 DYALKKVESLYLDCTES--GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSAL 324
D +K + DC ++ G D +S ++ G+ L +SS +K+W L
Sbjct: 169 DLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTL 228
Query: 325 KGHTERATDVTFSPVSNHVATSSADRTARLWN-TDGSLLNTFQGHLDRLARMAFHPSGKY 383
GH + +T S + +A+ S D+T + WN G L T++ H + +AF
Sbjct: 229 VGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAF------ 282
Query: 384 LGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGL------DALARV 437
T + D+ G L EG S+ G P G+L CG D ++
Sbjct: 283 -------STANIIDIP-GSLLSTPEGKSKVKQG----PGGNLVGQCGYLATGSRDKTIKI 330
Query: 438 WDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVI-PAHSN 496
W+L TGR + GH V + F P G L + G+D T R+WD+ + + + I AH++
Sbjct: 331 WELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTH 390
Query: 497 LISQVKFEPQEGYFLVTGSYDMTVKVW 523
IS + F + + TG D +KVW
Sbjct: 391 FISCLDFCLHNPH-IATGGVDDVIKVW 416
Score = 233 (87.1 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 70/260 (26%), Positives = 113/260 (43%)
Query: 314 SMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTD-GSLLNTFQGHLDRL 372
++PR + L GH V F P + + ++S D T ++W+ + G T +GH + +
Sbjct: 92 ALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 373 ARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLD 432
+ F +G L + S D T +LWD T + GH +V + F P G S D
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 433 ALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIP 492
+VW+ TG I L GH V I+ S +G +A+ D T + W++ K + L
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR 271
Query: 493 AHSNLISQVKFEPQEGYFLVTGSYDMTV----KVWSGRDFKLVKSL----SGHEAKVTSL 544
HS+++ + F + GS T KV G LV +G K +
Sbjct: 272 EHSHVVECLAFSTAN-IIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKI 330
Query: 545 DIHPDEQSIAT-VSHDRWIK 563
+ +AT + HD W++
Sbjct: 331 WELATGRCLATYIGHDNWVR 350
Score = 222 (83.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/234 (28%), Positives = 108/234 (46%)
Query: 259 DESIDDEIDYALKKVESLYLDCTES--GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMP 316
D+ I D +K E+ C ++ G + + + S DG+ +A+ S +K W++
Sbjct: 203 DQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIV 262
Query: 317 RLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQGHLDRLARMA 376
+ + + + H+ HV A TA + + GSLL+T +G +++
Sbjct: 263 KGECLATYREHS-------------HVVECLAFSTANIIDIPGSLLSTPEGK----SKVK 305
Query: 377 FHPSGK------YLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCG 430
P G YL T S DKT ++W++ TG L GH V + FHP G S G
Sbjct: 306 QGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVG 365
Query: 431 LDALARVWDLRTGRSILAL-EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 483
D RVWD+ GR I + E H + + F + H+ATGG D+ ++W L+
Sbjct: 366 DDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 291 (107.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 68/226 (30%), Positives = 107/226 (47%)
Query: 300 LLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDG 359
LL T V +WS+ + +L GHT V F+ V ++ +LW+ +
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 360 S-LLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIA 418
S ++ F GH + + FHP G++L + S D R+WD + +GH+R + I
Sbjct: 90 SKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIE 149
Query: 419 FHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCR 478
F PDG S GLD + +VWDL G+ + + H P+ + F P + LATG D T +
Sbjct: 150 FSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 209
Query: 479 IWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWS 524
WDL + + + + + F P +G L G D +KV+S
Sbjct: 210 FWDLETFELIGTTRPEATGVRAIAFHP-DGQTLFCG-LDDGLKVYS 253
Score = 280 (103.6 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 73/252 (28%), Positives = 112/252 (44%)
Query: 317 RLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGSLLNTFQ--GHLDRLAR 374
+LQ+F A G+ + S + T D LW+ G + GH +
Sbjct: 7 KLQEFVAHSGNVNCLS--IGKKTSRLLLTGGDDYKVNLWSI-GKTTSPMSLCGHTSPVDS 63
Query: 375 MAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFHPDGSLAASCGLDAL 434
+AF+ + + +LWD++ + GH + + FHP G AS D
Sbjct: 64 VAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTN 123
Query: 435 ARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKRKSLYVIPAH 494
RVWD R I +GH + + I FSP+G + +GG DN ++WDL K L+ H
Sbjct: 124 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 183
Query: 495 SNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGHEAKVTSLDIHPDEQSIA 554
I + F P E + L TGS D TVK W F+L+ + V ++ HPD Q++
Sbjct: 184 EGPIRSLDFHPLE-FLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242
Query: 555 TVSHDRWIKLWS 566
D +K++S
Sbjct: 243 C-GLDDGLKVYS 253
Score = 273 (101.2 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 63/208 (30%), Positives = 96/208 (46%)
Query: 359 GSLLNTFQGHLDRLARMAF-HPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGI 417
G L F H + ++ + + L T D LW + + GH+ V +
Sbjct: 5 GYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSV 64
Query: 418 AFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTC 477
AF+ + L + + ++WDL + + A GH + F P G LA+G D
Sbjct: 65 AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNL 124
Query: 478 RIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRDFKLVKSLSGH 537
R+WD RK+ + H+ IS ++F P +G ++V+G D VKVW KL+ H
Sbjct: 125 RVWDTRKKGCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 183
Query: 538 EAKVTSLDIHPDEQSIATVSHDRWIKLW 565
E + SLD HP E +AT S DR +K W
Sbjct: 184 EGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 234 (87.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 51/192 (26%), Positives = 89/192 (46%)
Query: 284 GDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVSNHV 343
G P+ +++ + L+ + SGV+K+W + + A GH + V F P +
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 115
Query: 344 ATSSADRTARLWNT-DGSLLNTFQGHLDRLARMAFHPSGKYLGTTSFDKTWRLWDVDTGV 402
A+ S+D R+W+T + T++GH ++ + F P G+++ + D ++WD+ G
Sbjct: 116 ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 175
Query: 403 ELLLQEGHSRSVYGIAFHPDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFS 462
L + H + + FHP L A+ D + WDL T I V I+F
Sbjct: 176 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFH 235
Query: 463 PNGYHLATGGED 474
P+G L G +D
Sbjct: 236 PDGQTLFCGLDD 247
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 29/104 (27%), Positives = 58/104 (55%)
Query: 468 LATGGEDNTCRIWDLRKRKSLYVIPAHSNLISQVKFEPQEGYFLVTGSYDMTVKVWSGRD 527
L TGG+D +W + K S + H++ + V F +E ++ G+ +K+W +
Sbjct: 31 LLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEE-VLVLAGASSGVIKLWDLEE 89
Query: 528 FKLVKSLSGHEAKVTSLDIHPDEQSIATVSHDRWIKLWSTRNKG 571
K+V++ +GH + ++++ HP + +A+ S D +++W TR KG
Sbjct: 90 SKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 133
Score = 140 (54.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 281 TESGDDRPLSGCSYSHDGNLLATSSLSGVVKIWSMPRLQKFSALKGHTERATDVTFSPVS 340
T G R +S +S DG + + L VVK+W + + K H + F P+
Sbjct: 137 TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE 196
Query: 341 NHVATSSADRTARLWNTDG-SLLNTFQGHLDRLARMAFHPSGKYL 384
+AT SADRT + W+ + L+ T + + +AFHP G+ L
Sbjct: 197 FLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTL 241
WARNING: HSPs involving 1595 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 579 464 0.00097 118 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1845
No. of states in DFA: 618 (66 KB)
Total size of DFA: 287 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.49u 0.39s 35.88t Elapsed: 00:00:02
Total cpu time: 35.65u 0.40s 36.05t Elapsed: 00:00:02
Start: Mon May 20 21:37:11 2013 End: Mon May 20 21:37:13 2013
WARNINGS ISSUED: 2