BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008054
         (579 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O22799|Y2349_ARATH Uncharacterized protein At2g33490 OS=Arabidopsis thaliana
           GN=At2g33490 PE=1 SV=2
          Length = 623

 Score =  426 bits (1094), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 284/591 (48%), Positives = 374/591 (63%), Gaps = 78/591 (13%)

Query: 1   MGSCLMEKTSLDDDEESRKVLLMLGEVQFELQKLVDNYRSNIFLTITNPSESLLNELRTV 60
           +G+CL+EKT+L+DDEES +VL+MLG++QFELQKLVD YRS+IF TIT PSESLLNELR V
Sbjct: 70  LGACLLEKTALNDDEESGRVLIMLGKLQFELQKLVDKYRSHIFQTITIPSESLLNELRIV 129

Query: 61  EDMKRQCDEKRNVCEYVMAQQREKGKSKSGKGESVSLQQQLQAANDEYEEEARLCVFRLK 120
           E+M+R CDEKRNV E ++ +QREKG+SK GKGE+ S  QQLQ A+D+YE E  L VFRLK
Sbjct: 130 EEMQRLCDEKRNVYEGMLTRQREKGRSKGGKGETFS-PQQLQEAHDDYENETTLFVFRLK 188

Query: 121 SLKQGQYRSLLTQAARHHAAQLNFFRKGFKSLEAVDTHVRLVAERQHIDYQFSGL----- 175
           SLKQGQ RSLLTQAARHHAAQL FF+K   SLE VD HV++V E QHIDY FSGL     
Sbjct: 189 SLKQGQTRSLLTQAARHHAAQLCFFKKALSSLEEVDPHVQMVTESQHIDYHFSGLEDDDG 248

Query: 176 ------EDNDGEDGEDSYYANEAGELSFDYRDNKQGLDVVSTSRKSMEVDDVDVSFPQAS 229
                  +NDG +  D       GELSF+YR N +  D  S++  S E+ + D++FPQ  
Sbjct: 249 DDEIENNENDGSEVHDD------GELSFEYRVNDKDQDADSSAGGSSELGNSDITFPQIG 302

Query: 230 TVENAEVNLDKNPGEYQASH---RERRGSSFSAPIFPE-RKIDPAERIRQVQQSSARQPS 285
               A+ N +   G Y+ SH   R+ R  S SAP+FPE R   P+E++ +++ +  R+ +
Sbjct: 303 GPYTAQENEE---GNYRKSHSFRRDVRAVSQSAPLFPENRTTPPSEKLLRMRSTLTRKFN 359

Query: 286 TYVLPTPIDAKVPISSSVAPRTR---PSNPS-GRTYNLSHSSPLEQKKEDRDYGDAHLSE 341
           TY LPTP++     SS+ +P  +    SNP+   T  + +SSPLE +      G A +S 
Sbjct: 360 TYALPTPVETTRSPSSTTSPGHKNVGSSNPTKAITKQIWYSSPLETR------GPAKVSS 413

Query: 342 HS--GLKSQSLLKESDSNNASTRPPPLRDGLALPQLDTLNSSDTKKIKTQASSGPLTSKS 399
            S   LK Q +L+ES+  N S  PPPL DGL   +L TL        K ++ SGPLTSK 
Sbjct: 414 RSMVALKEQ-VLRESN-KNTSRLPPPLADGLLFSRLGTL--------KRRSFSGPLTSKP 463

Query: 400 SSSKPALSSSGPITYTELPQIVSGLLSHAPVPQTKTS--PRV--SPTASPPLVSSPRISE 455
             +KP  ++S          + SG     P+P+   S  P+V  SPTASP  VS+P+ISE
Sbjct: 464 LPNKPLSTTS---------HLYSG-----PIPRNPVSKLPKVSSSPTASPTFVSTPKISE 509

Query: 456 LHELPRPPNAFATKPAKSSGLVGHSAPLMFRNQEHTSTNKNPSMASYTASPLPIPPLIVS 515
           LHELPRPP   +T   KSS  +G+SAPL+ R+Q  +       + + +ASPLPIPP I +
Sbjct: 510 LHELPRPPPRSST---KSSRELGYSAPLVSRSQLLSK-----PLITNSASPLPIPPAI-T 560

Query: 516 RSFSIPSSSQKAMALHVSKFLESPKVVEKSEGVSSPPLTPISLANVKPVSI 566
           RSFSIP+S+ +A  L +SK      +  K  G  SPPLTP+SL +  P ++
Sbjct: 561 RSFSIPTSNLRASDLDMSK----TSLGTKKLGTPSPPLTPMSLIHPPPQAL 607


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.125    0.341 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,367,820
Number of Sequences: 539616
Number of extensions: 8993447
Number of successful extensions: 33624
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 869
Number of HSP's that attempted gapping in prelim test: 30918
Number of HSP's gapped (non-prelim): 2372
length of query: 579
length of database: 191,569,459
effective HSP length: 123
effective length of query: 456
effective length of database: 125,196,691
effective search space: 57089691096
effective search space used: 57089691096
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)