Query 008055
Match_columns 579
No_of_seqs 512 out of 4412
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 17:03:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3E-56 1E-60 442.9 18.8 259 271-551 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 1.7E-55 5.7E-60 443.6 23.0 258 271-550 41-319 (329)
3 3omv_A RAF proto-oncogene seri 100.0 2.6E-55 8.9E-60 436.2 23.2 258 270-549 35-299 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 2.2E-55 7.5E-60 438.6 20.1 255 272-547 27-303 (308)
5 4b9d_A Serine/threonine-protei 100.0 6.6E-55 2.3E-59 439.3 19.0 251 271-543 24-276 (350)
6 4ase_A Vascular endothelial gr 100.0 4.1E-54 1.4E-58 436.9 17.8 272 261-552 54-349 (353)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-53 4.1E-58 428.2 20.7 258 271-557 58-323 (336)
8 3fpq_A Serine/threonine-protei 100.0 1.7E-53 5.7E-58 420.1 20.6 247 274-543 29-282 (290)
9 4fih_A Serine/threonine-protei 100.0 1.8E-53 6.2E-58 428.1 20.5 248 271-543 74-323 (346)
10 3hmm_A TGF-beta receptor type- 100.0 3.5E-53 1.2E-57 423.6 20.9 272 272-554 4-301 (303)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.9E-54 3.1E-58 424.0 14.7 248 271-543 32-284 (311)
12 3hyh_A Carbon catabolite-derep 100.0 6.8E-53 2.3E-57 412.1 20.6 247 271-543 13-262 (275)
13 4fie_A Serine/threonine-protei 100.0 2.8E-52 9.5E-57 429.8 22.0 248 271-543 151-400 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-53 1.3E-57 419.7 11.9 243 271-538 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 3E-50 1E-54 400.4 18.0 245 272-543 6-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.6E-48 5.3E-53 402.8 20.9 265 271-543 54-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.7E-47 9.3E-52 389.4 22.8 261 269-543 19-352 (361)
18 2qkw_B Protein kinase; three-h 100.0 3.4E-47 1.2E-51 385.1 20.3 280 266-551 34-316 (321)
19 3uto_A Twitchin; kinase, muscl 100.0 5.3E-47 1.8E-51 410.2 21.5 249 271-543 157-410 (573)
20 3v5w_A G-protein coupled recep 100.0 3.7E-47 1.3E-51 408.7 18.4 251 270-543 188-449 (689)
21 3uim_A Brassinosteroid insensi 100.0 1.1E-46 3.8E-51 382.2 20.8 288 258-547 17-308 (326)
22 3p86_A Serine/threonine-protei 100.0 1.2E-45 4E-50 371.6 19.7 267 266-553 32-301 (309)
23 3s95_A LIMK-1, LIM domain kina 100.0 6.7E-45 2.3E-49 366.4 21.1 261 270-553 9-285 (310)
24 3fe3_A MAP/microtubule affinit 100.0 6.4E-45 2.2E-49 368.9 20.9 249 270-543 14-264 (328)
25 2psq_A Fibroblast growth facto 100.0 1.4E-44 4.9E-49 372.8 23.9 263 270-553 80-367 (370)
26 3kul_A Ephrin type-A receptor 100.0 1E-44 3.4E-49 367.5 21.8 260 270-553 48-316 (325)
27 3soc_A Activin receptor type-2 100.0 1.3E-44 4.4E-49 366.3 21.1 274 270-553 23-321 (322)
28 2qol_A Ephrin receptor; recept 100.0 1.5E-44 5E-49 373.1 21.4 261 270-554 44-313 (373)
29 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-45 1.4E-49 378.1 17.1 259 270-552 113-376 (377)
30 4hcu_A Tyrosine-protein kinase 100.0 2E-44 7E-49 355.2 21.0 256 270-551 9-267 (269)
31 3fxz_A Serine/threonine-protei 100.0 5.4E-44 1.8E-48 357.5 22.1 249 270-543 19-269 (297)
32 3tt0_A Basic fibroblast growth 100.0 5.7E-44 1.9E-48 370.3 23.0 264 270-554 68-356 (382)
33 3gen_A Tyrosine-protein kinase 100.0 4.9E-44 1.7E-48 355.1 20.9 257 270-552 23-282 (283)
34 3ugc_A Tyrosine-protein kinase 100.0 1.6E-44 5.4E-49 361.0 16.3 273 270-551 9-292 (295)
35 2nru_A Interleukin-1 receptor- 100.0 4.6E-43 1.6E-47 352.4 26.9 282 258-549 12-305 (307)
36 3l9p_A Anaplastic lymphoma kin 100.0 3.1E-44 1.1E-48 370.0 18.8 267 270-557 70-352 (367)
37 2yab_A Death-associated protei 100.0 1.8E-43 6.1E-48 362.6 23.6 251 270-543 11-272 (361)
38 3vhe_A Vascular endothelial gr 100.0 2.4E-44 8.3E-49 370.0 17.2 273 260-552 11-357 (359)
39 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.4E-44 1.5E-48 352.6 18.2 255 270-550 7-264 (268)
40 3lb7_A RAF proto-oncogene seri 100.0 3.3E-43 1.1E-47 353.4 24.8 262 270-552 35-302 (307)
41 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-43 4E-48 357.8 21.1 262 270-552 22-313 (314)
42 2bdw_A Hypothetical protein K1 100.0 1.6E-43 5.3E-48 363.8 22.4 252 270-543 28-284 (362)
43 3niz_A Rhodanese family protei 100.0 3.3E-43 1.1E-47 354.1 24.1 267 270-543 20-300 (311)
44 3kmu_A ILK, integrin-linked ki 100.0 7.1E-44 2.4E-48 351.3 18.6 253 271-549 10-269 (271)
45 1tki_A Titin; serine kinase, m 100.0 2E-43 6.7E-48 357.2 21.5 250 270-544 4-258 (321)
46 1luf_A Muscle-specific tyrosin 100.0 3.7E-44 1.3E-48 366.2 16.3 266 266-552 42-337 (343)
47 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-43 7.1E-48 373.7 22.5 254 269-551 191-446 (450)
48 4eqm_A Protein kinase; transfe 100.0 7.8E-44 2.7E-48 355.8 18.0 263 270-552 10-277 (294)
49 3zgw_A Maternal embryonic leuc 100.0 1E-43 3.4E-48 362.2 19.2 249 270-544 9-261 (347)
50 3qup_A Tyrosine-protein kinase 100.0 1.2E-43 4E-48 359.4 19.4 268 268-555 20-303 (323)
51 1o6l_A RAC-beta serine/threoni 100.0 1.2E-43 4E-48 360.6 19.3 248 271-543 5-260 (337)
52 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-43 5.9E-48 356.2 20.2 246 271-543 57-304 (311)
53 3dtc_A Mitogen-activated prote 100.0 1.8E-43 6E-48 348.7 19.6 256 270-548 6-271 (271)
54 2eva_A TAK1 kinase - TAB1 chim 100.0 3.8E-43 1.3E-47 353.1 22.3 258 271-553 8-266 (307)
55 3poz_A Epidermal growth factor 100.0 1.2E-43 4.2E-48 359.9 18.6 256 271-551 15-279 (327)
56 2y0a_A Death-associated protei 100.0 3.9E-43 1.3E-47 355.9 22.1 252 271-543 11-271 (326)
57 1mp8_A Focal adhesion kinase 1 100.0 2E-43 6.8E-48 350.5 19.4 259 270-553 14-279 (281)
58 4f0f_A Serine/threonine-protei 100.0 5.3E-43 1.8E-47 348.4 22.4 254 270-547 18-286 (287)
59 2c30_A Serine/threonine-protei 100.0 1.2E-42 4E-47 351.6 25.2 259 260-543 24-294 (321)
60 1t46_A HOMO sapiens V-KIT hard 100.0 2.8E-43 9.5E-48 354.9 20.5 264 270-553 22-310 (313)
61 3tki_A Serine/threonine-protei 100.0 3E-43 1E-47 356.2 20.8 251 271-544 7-262 (323)
62 3q4u_A Activin receptor type-1 100.0 4.2E-43 1.4E-47 351.5 21.1 253 270-548 7-300 (301)
63 1ob3_A PFPK5, cell division co 100.0 3.2E-43 1.1E-47 350.3 20.1 266 271-543 2-280 (288)
64 2pvf_A Fibroblast growth facto 100.0 6.6E-43 2.2E-47 355.7 22.3 264 270-554 34-322 (334)
65 4euu_A Serine/threonine-protei 100.0 1.6E-42 5.4E-47 350.6 24.7 272 271-547 9-306 (319)
66 3soa_A Calcium/calmodulin-depe 100.0 6E-43 2E-47 368.0 22.4 253 270-543 10-267 (444)
67 1qcf_A Haematopoetic cell kina 100.0 1E-43 3.5E-48 376.6 16.7 256 268-549 185-443 (454)
68 3dbq_A Dual specificity protei 100.0 3.7E-43 1.3E-47 358.8 20.0 251 270-544 8-274 (343)
69 1rjb_A FL cytokine receptor; k 100.0 2.6E-43 8.8E-48 360.2 18.8 265 269-553 43-337 (344)
70 3c0i_A Peripheral plasma membr 100.0 2.5E-43 8.6E-48 361.1 18.6 255 271-543 24-286 (351)
71 4fr4_A YANK1, serine/threonine 100.0 2.9E-43 9.9E-48 363.2 19.1 250 271-542 15-270 (384)
72 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-43 3.7E-48 380.1 16.5 258 269-551 218-479 (495)
73 3t9t_A Tyrosine-protein kinase 100.0 4.4E-43 1.5E-47 345.0 19.6 256 270-551 7-265 (267)
74 2zv2_A Calcium/calmodulin-depe 100.0 9.8E-43 3.3E-47 348.5 21.8 250 270-543 12-292 (298)
75 3og7_A AKAP9-BRAF fusion prote 100.0 5.4E-43 1.8E-47 348.8 19.7 260 269-549 22-287 (289)
76 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.9E-43 6.6E-48 358.7 16.5 249 270-544 8-259 (336)
77 3o0g_A Cell division protein k 100.0 1.3E-42 4.5E-47 346.6 22.3 266 271-543 2-282 (292)
78 1u59_A Tyrosine-protein kinase 100.0 1.4E-42 4.9E-47 345.4 22.4 260 271-555 9-277 (287)
79 4dc2_A Protein kinase C IOTA t 100.0 4.7E-43 1.6E-47 362.8 19.6 252 270-538 51-307 (396)
80 4e5w_A Tyrosine-protein kinase 100.0 2.8E-43 9.6E-48 353.0 17.3 268 271-549 21-301 (302)
81 1kob_A Twitchin; kinase, intra 100.0 1.3E-42 4.5E-47 359.4 22.8 251 271-543 51-304 (387)
82 1mqb_A Ephrin type-A receptor 100.0 1.4E-42 4.9E-47 352.9 22.7 262 270-555 43-314 (333)
83 1fvr_A Tyrosine-protein kinase 100.0 1E-42 3.6E-47 353.1 21.5 262 271-553 25-303 (327)
84 3brb_A Proto-oncogene tyrosine 100.0 7.9E-43 2.7E-47 351.7 20.4 266 267-552 30-310 (313)
85 3uc3_A Serine/threonine-protei 100.0 6.6E-43 2.3E-47 359.2 20.1 253 270-544 19-275 (361)
86 2zmd_A Dual specificity protei 100.0 8.1E-43 2.8E-47 362.2 20.8 250 271-544 56-321 (390)
87 3kfa_A Tyrosine-protein kinase 100.0 1.1E-43 3.6E-48 353.6 13.6 262 268-554 10-275 (288)
88 1xbb_A Tyrosine-protein kinase 100.0 4.9E-43 1.7E-47 349.5 18.4 262 269-555 14-284 (291)
89 3kex_A Receptor tyrosine-prote 100.0 4.5E-43 1.5E-47 355.5 18.3 257 270-551 12-277 (325)
90 1csn_A Casein kinase-1; phosph 100.0 1.3E-42 4.4E-47 347.5 21.3 264 270-554 9-287 (298)
91 3lxl_A Tyrosine-protein kinase 100.0 4E-43 1.4E-47 356.2 17.8 274 271-554 23-307 (327)
92 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-43 6.1E-48 361.6 15.3 250 269-543 21-280 (353)
93 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-42 4.6E-47 350.9 21.5 270 273-553 33-313 (318)
94 1qpc_A LCK kinase; alpha beta 100.0 5.2E-43 1.8E-47 347.0 18.1 259 269-553 11-272 (279)
95 3op5_A Serine/threonine-protei 100.0 5.2E-43 1.8E-47 360.8 18.6 273 269-555 33-334 (364)
96 2izr_A Casein kinase I isoform 100.0 1.1E-42 3.8E-47 353.4 20.8 263 270-554 8-285 (330)
97 2wqm_A Serine/threonine-protei 100.0 2.2E-42 7.6E-47 347.9 22.7 267 271-554 32-301 (310)
98 4aw2_A Serine/threonine-protei 100.0 2.2E-43 7.6E-48 370.0 15.5 259 263-543 66-338 (437)
99 3lzb_A Epidermal growth factor 100.0 9.4E-43 3.2E-47 353.3 19.6 257 270-551 14-279 (327)
100 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3E-43 1E-47 372.7 16.5 255 269-549 182-439 (452)
101 1fot_A TPK1 delta, CAMP-depend 100.0 9.3E-43 3.2E-47 351.4 19.2 246 271-543 6-258 (318)
102 3v8s_A RHO-associated protein 100.0 1.6E-43 5.4E-48 368.3 13.9 257 263-543 61-329 (410)
103 3kk8_A Calcium/calmodulin depe 100.0 2.4E-42 8.2E-47 343.1 21.7 254 270-544 5-262 (284)
104 4agu_A Cyclin-dependent kinase 100.0 5.1E-42 1.8E-46 345.4 23.9 266 271-543 3-284 (311)
105 2xir_A Vascular endothelial gr 100.0 8.8E-43 3E-47 351.7 18.2 273 261-553 17-313 (316)
106 3a8x_A Protein kinase C IOTA t 100.0 2E-42 6.7E-47 353.1 20.7 251 271-538 9-264 (345)
107 1xjd_A Protein kinase C, theta 100.0 4.5E-43 1.5E-47 357.3 15.8 251 267-542 13-268 (345)
108 3gni_B Strad alpha; kinase fol 100.0 2.2E-42 7.4E-47 359.5 21.2 269 270-543 24-333 (389)
109 2ozo_A Tyrosine-protein kinase 100.0 3.2E-42 1.1E-46 377.4 23.6 259 271-554 335-602 (613)
110 2w4o_A Calcium/calmodulin-depe 100.0 2E-42 6.7E-47 354.1 20.5 248 270-543 52-305 (349)
111 3mdy_A Bone morphogenetic prot 100.0 8.9E-42 3E-46 347.6 25.2 265 267-554 33-335 (337)
112 2pmi_A Negative RE, cyclin-dep 100.0 3.9E-42 1.3E-46 347.3 22.0 269 270-543 4-293 (317)
113 3c1x_A Hepatocyte growth facto 100.0 1E-42 3.6E-47 358.8 18.1 258 272-553 90-358 (373)
114 3cc6_A Protein tyrosine kinase 100.0 2.1E-42 7.2E-47 343.1 19.6 258 270-552 11-275 (281)
115 2w5a_A Serine/threonine-protei 100.0 7.3E-43 2.5E-47 345.8 16.1 255 271-545 6-269 (279)
116 2y94_A 5'-AMP-activated protei 100.0 2.4E-42 8.3E-47 365.8 20.8 249 270-543 15-266 (476)
117 2i0e_A Protein kinase C-beta I 100.0 1.3E-42 4.4E-47 355.1 17.7 250 269-543 18-276 (353)
118 2i1m_A Macrophage colony-stimu 100.0 8.2E-43 2.8E-47 354.8 16.1 265 269-553 44-329 (333)
119 2eue_A Carbon catabolite derep 100.0 2.9E-42 9.9E-47 340.9 19.6 247 271-543 13-262 (275)
120 4eut_A Serine/threonine-protei 100.0 3E-42 1E-46 359.0 20.7 277 271-552 9-311 (396)
121 3qd2_B Eukaryotic translation 100.0 2.3E-42 7.7E-47 351.0 19.2 249 271-543 6-325 (332)
122 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-42 5.5E-47 354.3 18.1 246 271-543 41-293 (350)
123 2a19_B Interferon-induced, dou 100.0 1.3E-42 4.3E-47 344.9 16.8 252 270-554 10-278 (284)
124 3a62_A Ribosomal protein S6 ki 100.0 2.9E-42 1E-46 349.7 19.9 249 270-543 16-276 (327)
125 1b6c_B TGF-B superfamily recep 100.0 8E-42 2.7E-46 348.7 23.2 266 263-554 34-340 (342)
126 2x4f_A Myosin light chain kina 100.0 3.5E-42 1.2E-46 355.0 20.7 251 275-548 93-349 (373)
127 1x8b_A WEE1HU, WEE1-like prote 100.0 2.6E-42 9E-47 343.1 18.9 248 270-543 10-279 (289)
128 3is5_A Calcium-dependent prote 100.0 3.3E-42 1.1E-46 342.4 19.6 252 272-543 23-278 (285)
129 2vd5_A DMPK protein; serine/th 100.0 6.2E-43 2.1E-47 364.1 14.7 260 263-543 53-327 (412)
130 3g33_A Cell division protein k 100.0 5.3E-42 1.8E-46 344.9 21.0 270 268-543 6-296 (308)
131 3gxj_A TGF-beta receptor type- 100.0 4.9E-44 1.7E-48 358.6 6.0 258 271-553 3-300 (303)
132 3fme_A Dual specificity mitoge 100.0 1.1E-42 3.6E-47 346.7 15.6 256 270-543 6-266 (290)
133 3f66_A Hepatocyte growth facto 100.0 4.9E-42 1.7E-46 343.4 20.5 258 271-552 25-293 (298)
134 3dls_A PAS domain-containing s 100.0 1.5E-42 5E-47 353.0 16.9 244 270-544 23-275 (335)
135 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-42 7.7E-47 350.5 18.1 273 270-551 40-323 (326)
136 3g2f_A Bone morphogenetic prot 100.0 3.3E-42 1.1E-46 350.8 19.3 275 270-555 12-323 (336)
137 3pls_A Macrophage-stimulating 100.0 7.7E-42 2.6E-46 341.8 21.6 258 272-553 22-290 (298)
138 2a2a_A Death-associated protei 100.0 6.7E-42 2.3E-46 346.2 21.3 252 271-543 12-272 (321)
139 2r5t_A Serine/threonine-protei 100.0 1.5E-42 5.2E-47 357.0 16.4 249 271-544 38-290 (373)
140 1nxk_A MAP kinase-activated pr 100.0 1.2E-41 4.2E-46 354.4 23.4 251 271-544 61-322 (400)
141 1byg_A CSK, protein (C-termina 100.0 2.4E-42 8.2E-47 342.1 16.8 254 270-552 20-275 (278)
142 2h8h_A Proto-oncogene tyrosine 100.0 9.7E-43 3.3E-47 376.1 14.9 258 266-549 262-522 (535)
143 1u5q_A Serine/threonine protei 100.0 5.3E-42 1.8E-46 350.5 19.5 247 272-544 55-306 (348)
144 3uzp_A CKI-delta, CKID, casein 100.0 1.4E-41 4.9E-46 339.5 22.0 264 270-555 8-285 (296)
145 3lm5_A Serine/threonine-protei 100.0 4.9E-42 1.7E-46 348.1 18.9 258 267-543 24-287 (327)
146 2acx_A G protein-coupled recep 100.0 3.2E-42 1.1E-46 369.9 18.4 256 269-543 182-444 (576)
147 4hgt_A Casein kinase I isoform 100.0 1.4E-41 4.7E-46 339.5 21.8 265 269-555 7-285 (296)
148 2buj_A Serine/threonine-protei 100.0 2.1E-42 7.2E-47 349.2 16.0 260 270-549 28-305 (317)
149 4fl3_A Tyrosine-protein kinase 100.0 5.1E-42 1.8E-46 376.6 19.9 250 277-551 375-632 (635)
150 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.7E-42 2E-46 367.0 19.7 252 270-538 184-438 (543)
151 3ork_A Serine/threonine protei 100.0 2.5E-42 8.5E-47 347.8 15.9 259 270-549 11-280 (311)
152 2yfx_A Tyrosine-protein kinase 100.0 7.2E-42 2.5E-46 347.0 19.3 265 270-555 29-309 (327)
153 1p4o_A Insulin-like growth fac 100.0 2.1E-42 7.3E-47 350.0 15.4 265 265-550 19-299 (322)
154 3an0_A Dual specificity mitoge 100.0 3E-42 1E-46 351.8 16.4 257 268-543 48-310 (340)
155 3bhy_A Death-associated protei 100.0 1E-41 3.5E-46 338.3 19.8 258 271-549 5-273 (283)
156 3hko_A Calcium/calmodulin-depe 100.0 5.2E-42 1.8E-46 350.6 18.1 258 267-543 22-330 (345)
157 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-41 4.6E-46 350.3 21.3 255 269-553 63-342 (365)
158 4fvq_A Tyrosine-protein kinase 100.0 8.5E-43 2.9E-47 347.2 11.8 254 270-553 7-278 (289)
159 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-41 4.9E-46 336.2 20.3 245 271-543 9-261 (277)
160 3oz6_A Mitogen-activated prote 100.0 6.2E-42 2.1E-46 355.9 18.4 267 269-544 7-329 (388)
161 4ejn_A RAC-alpha serine/threon 100.0 2.6E-42 8.7E-47 365.3 15.6 249 270-543 147-404 (446)
162 3ttj_A Mitogen-activated prote 100.0 1.1E-41 3.9E-46 361.1 20.5 264 270-543 61-355 (464)
163 3llt_A Serine/threonine kinase 100.0 1E-41 3.5E-46 350.6 19.5 271 261-543 25-355 (360)
164 2h34_A Serine/threonine-protei 100.0 8.4E-42 2.9E-46 343.6 18.1 262 270-553 33-299 (309)
165 3cok_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46 338.5 17.4 249 271-543 11-262 (278)
166 2yex_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 333.1 22.2 250 271-543 7-261 (276)
167 3i6u_A CDS1, serine/threonine- 100.0 1.9E-41 6.4E-46 355.3 21.3 254 269-543 133-399 (419)
168 1t4h_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46 337.4 20.7 248 272-543 27-282 (290)
169 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.4E-42 3.2E-46 346.4 17.7 266 270-543 33-318 (329)
170 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-41 3.7E-46 347.2 18.1 251 270-544 21-278 (342)
171 3lij_A Calcium/calmodulin depe 100.0 2.8E-41 9.5E-46 361.9 22.0 256 271-549 37-299 (494)
172 3mi9_A Cell division protein k 100.0 4.7E-41 1.6E-45 344.5 22.6 266 271-543 17-311 (351)
173 4aaa_A Cyclin-dependent kinase 100.0 1.9E-41 6.6E-46 344.4 19.5 266 271-543 25-306 (331)
174 2v62_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46 351.7 14.2 261 270-547 36-325 (345)
175 1u46_A ACK-1, activated CDC42 100.0 7.7E-42 2.6E-46 340.6 16.1 259 270-551 17-285 (291)
176 3fdn_A Serine/threonine-protei 100.0 9.7E-42 3.3E-46 337.9 16.7 249 270-544 8-258 (279)
177 3eb0_A Putative uncharacterize 100.0 2.8E-41 9.6E-46 350.2 20.9 273 267-549 3-329 (383)
178 3a7i_A MST3 kinase, serine/thr 100.0 4.6E-41 1.6E-45 337.1 21.8 249 271-545 22-272 (303)
179 3kn6_A Ribosomal protein S6 ki 100.0 2.1E-41 7.2E-46 343.0 19.4 247 276-543 16-270 (325)
180 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-42 5.5E-47 350.3 11.1 265 264-553 26-305 (319)
181 3rp9_A Mitogen-activated prote 100.0 1.6E-41 5.6E-46 360.5 19.2 193 271-471 53-280 (458)
182 3eqc_A Dual specificity mitoge 100.0 1.5E-41 5E-46 349.4 18.1 266 270-543 32-324 (360)
183 2y7j_A Phosphorylase B kinase 100.0 4.9E-41 1.7E-45 345.9 21.9 254 267-543 90-359 (365)
184 2jii_A Serine/threonine-protei 100.0 9.8E-42 3.4E-46 349.6 16.5 263 271-555 42-341 (352)
185 2ycf_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 340.8 20.6 253 270-543 9-274 (322)
186 3mwu_A Calmodulin-domain prote 100.0 1.8E-41 6.2E-46 362.7 19.0 250 271-544 22-277 (486)
187 3ll6_A Cyclin G-associated kin 100.0 2E-41 6.7E-46 344.8 18.3 259 270-555 27-313 (337)
188 3nyv_A Calmodulin-domain prote 100.0 1.5E-41 5.3E-46 363.3 18.3 249 271-543 26-281 (484)
189 3q5i_A Protein kinase; CDPK, m 100.0 5E-41 1.7E-45 360.9 22.0 250 270-543 35-301 (504)
190 3nsz_A CK II alpha, casein kin 100.0 6.6E-41 2.3E-45 340.2 21.6 258 271-543 36-319 (330)
191 1cm8_A Phosphorylated MAP kina 100.0 5.4E-41 1.9E-45 345.7 20.9 263 270-543 24-307 (367)
192 2rku_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 335.7 19.7 249 271-544 15-266 (294)
193 2xrw_A Mitogen-activated prote 100.0 9.6E-41 3.3E-45 344.6 22.4 265 270-544 24-319 (371)
194 3pg1_A Mitogen-activated prote 100.0 1.9E-41 6.5E-46 348.8 17.1 275 262-543 13-316 (362)
195 2owb_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 342.5 19.3 250 270-544 40-292 (335)
196 2h6d_A 5'-AMP-activated protei 100.0 4E-41 1.4E-45 332.8 18.5 250 270-544 10-262 (276)
197 1ua2_A CAK, cell division prot 100.0 6E-41 2.1E-45 342.9 20.4 269 269-544 8-292 (346)
198 3sv0_A Casein kinase I-like; t 100.0 1.2E-40 4.1E-45 353.5 23.3 264 270-554 6-282 (483)
199 3mtl_A Cell division protein k 100.0 1.9E-41 6.7E-46 343.3 16.5 265 271-543 2-281 (324)
200 2r3i_A Cell division protein k 100.0 9.5E-41 3.2E-45 334.1 21.3 267 271-543 3-283 (299)
201 3cek_A Dual specificity protei 100.0 5.5E-41 1.9E-45 338.3 19.0 252 269-544 26-293 (313)
202 3byv_A Rhoptry kinase; malaria 100.0 4.1E-42 1.4E-46 355.8 10.9 250 271-549 73-367 (377)
203 3n9x_A Phosphotransferase; mal 100.0 2.8E-40 9.6E-45 347.9 24.8 199 270-476 25-253 (432)
204 2pml_X PFPK7, Ser/Thr protein 100.0 3.6E-41 1.2E-45 344.8 17.3 269 270-543 30-322 (348)
205 1j1b_A Glycogen synthase kinas 100.0 7.4E-41 2.5E-45 350.9 20.0 258 272-543 55-336 (420)
206 2ac3_A MAP kinase-interacting 100.0 1.7E-40 6E-45 335.0 21.7 258 271-543 12-295 (316)
207 2clq_A Mitogen-activated prote 100.0 2.1E-40 7.1E-45 330.9 21.8 251 272-543 23-278 (295)
208 3pfq_A PKC-B, PKC-beta, protei 100.0 6E-41 2E-45 370.6 19.7 250 268-542 338-596 (674)
209 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-41 4.9E-46 350.9 13.7 260 272-549 63-360 (371)
210 1blx_A Cyclin-dependent kinase 100.0 1E-40 3.4E-45 338.2 19.5 269 269-543 9-296 (326)
211 1phk_A Phosphorylase kinase; g 100.0 2.7E-40 9.3E-45 330.6 22.1 253 270-543 16-283 (298)
212 3com_A Serine/threonine-protei 100.0 2.4E-40 8.1E-45 333.7 21.8 250 269-543 27-278 (314)
213 2vgo_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45 332.4 17.9 248 271-544 14-263 (284)
214 4e7w_A Glycogen synthase kinas 100.0 1.3E-40 4.6E-45 346.1 20.4 263 271-543 40-321 (394)
215 3e3p_A Protein kinase, putativ 100.0 1.3E-40 4.5E-45 342.2 19.8 273 264-543 16-314 (360)
216 2jam_A Calcium/calmodulin-depe 100.0 1.4E-40 4.9E-45 333.8 19.4 250 270-543 8-261 (304)
217 2x7f_A TRAF2 and NCK-interacti 100.0 4.1E-41 1.4E-45 341.1 15.4 252 268-543 21-286 (326)
218 1vzo_A Ribosomal protein S6 ki 100.0 2.6E-41 8.8E-46 346.7 13.7 253 271-544 54-322 (355)
219 2j0j_A Focal adhesion kinase 1 100.0 1.3E-40 4.6E-45 366.7 19.7 261 268-553 387-654 (656)
220 2wei_A Calmodulin-domain prote 100.0 1.2E-40 4.3E-45 331.4 16.9 250 270-543 21-276 (287)
221 2fst_X Mitogen-activated prote 100.0 1.4E-40 4.7E-45 342.4 17.1 263 270-543 28-311 (367)
222 3aln_A Dual specificity mitoge 100.0 1E-40 3.5E-45 338.5 15.7 258 270-543 21-285 (327)
223 3kvw_A DYRK2, dual specificity 100.0 8.5E-40 2.9E-44 343.7 22.4 200 270-480 96-304 (429)
224 2j7t_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 333.0 16.0 251 270-543 18-275 (302)
225 2vwi_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 333.5 14.9 263 268-543 12-287 (303)
226 2wtk_C Serine/threonine-protei 100.0 8.2E-40 2.8E-44 328.3 20.0 251 270-544 4-264 (305)
227 1z57_A Dual specificity protei 100.0 2.5E-39 8.7E-44 329.4 23.9 263 270-543 13-328 (339)
228 4exu_A Mitogen-activated prote 100.0 2.7E-39 9.2E-44 333.8 23.6 262 270-543 41-323 (371)
229 3qyz_A Mitogen-activated prote 100.0 7.4E-40 2.5E-44 337.2 19.0 264 270-543 26-313 (364)
230 3coi_A Mitogen-activated prote 100.0 1.6E-39 5.6E-44 333.2 21.3 262 270-543 23-305 (353)
231 2i6l_A Mitogen-activated prote 100.0 9.5E-40 3.2E-44 329.9 19.0 262 270-543 10-305 (320)
232 1wak_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 339.3 19.6 264 270-543 36-391 (397)
233 2dyl_A Dual specificity mitoge 100.0 8.3E-40 2.8E-44 330.2 17.6 253 271-543 25-283 (318)
234 1zy4_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 326.2 18.7 249 270-543 5-283 (303)
235 3rgf_A Cyclin-dependent kinase 100.0 9E-40 3.1E-44 341.5 18.0 264 272-543 21-333 (405)
236 3fhr_A MAP kinase-activated pr 100.0 1.5E-39 5.2E-44 331.0 18.7 253 270-544 27-288 (336)
237 2b9h_A MAP kinase FUS3, mitoge 100.0 4.1E-39 1.4E-43 330.1 21.9 264 270-543 10-305 (353)
238 2vx3_A Dual specificity tyrosi 100.0 1.5E-38 5.3E-43 329.5 24.2 202 270-480 53-263 (382)
239 2rio_A Serine/threonine-protei 100.0 2.9E-39 1E-43 340.3 18.8 250 272-543 16-295 (434)
240 2iwi_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 327.4 15.5 245 267-543 27-283 (312)
241 3a99_A Proto-oncogene serine/t 100.0 7.1E-40 2.4E-44 331.2 12.7 244 268-543 40-293 (320)
242 2eu9_A Dual specificity protei 100.0 2.3E-38 7.7E-43 324.6 23.6 263 270-543 18-333 (355)
243 3p23_A Serine/threonine-protei 100.0 5.4E-39 1.8E-43 337.4 18.0 245 270-542 23-282 (432)
244 3uqc_A Probable conserved tran 100.0 3.6E-38 1.2E-42 313.1 22.0 236 270-553 30-268 (286)
245 3qa8_A MGC80376 protein; kinas 100.0 7.7E-39 2.6E-43 346.9 18.2 271 271-552 14-311 (676)
246 1q8y_A SR protein kinase; tran 100.0 1.1E-38 3.6E-43 329.6 18.5 262 270-543 18-333 (373)
247 2pzi_A Probable serine/threoni 100.0 5.3E-38 1.8E-42 349.1 19.7 244 270-552 79-330 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1.1E-36 3.9E-41 304.7 20.4 226 271-544 17-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 3.2E-37 1.1E-41 322.6 15.0 242 272-542 79-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 311.1 9.6 242 270-542 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.2E-30 7.5E-35 280.2 5.9 187 278-475 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 2.9E-27 9.9E-32 254.4 8.9 184 275-476 340-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 3.3E-24 1.1E-28 211.6 11.4 155 263-448 82-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 1.4E-19 4.8E-24 176.2 10.8 139 272-426 48-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 6.6E-18 2.2E-22 170.9 7.2 145 266-425 90-264 (397)
256 3rgz_A Protein brassinosteroid 99.5 1.1E-14 3.8E-19 163.9 8.2 107 1-107 631-742 (768)
257 2v70_A SLIT-2, SLIT homolog 2 99.4 1.9E-13 6.5E-18 129.4 9.9 93 3-95 33-128 (220)
258 1w8a_A SLIT protein; signaling 99.4 4.3E-13 1.5E-17 124.0 9.6 104 2-105 29-139 (192)
259 2v9t_B SLIT homolog 2 protein 99.4 5.1E-13 1.7E-17 126.4 10.2 105 2-106 32-142 (220)
260 1w8a_A SLIT protein; signaling 99.4 4.7E-13 1.6E-17 123.8 8.1 89 1-89 53-143 (192)
261 2wfh_A SLIT homolog 2 protein 99.4 1.1E-12 3.6E-17 121.5 10.3 103 2-105 31-139 (193)
262 3e6j_A Variable lymphocyte rec 99.4 1.5E-12 5.3E-17 123.9 11.2 104 2-106 40-149 (229)
263 3g39_A Variable lymphocyte rec 99.4 1.1E-12 3.7E-17 118.7 9.4 84 3-86 31-116 (170)
264 2r9u_A Variable lymphocyte rec 99.4 1.5E-12 5.2E-17 118.2 9.3 86 5-93 15-102 (174)
265 2o6r_A Variable lymphocyte rec 99.3 4.6E-12 1.6E-16 115.4 11.7 104 2-105 28-137 (177)
266 3m19_A Variable lymphocyte rec 99.3 3.7E-12 1.3E-16 123.0 11.7 106 1-106 58-169 (251)
267 2v9t_B SLIT homolog 2 protein 99.3 3.8E-12 1.3E-16 120.3 10.4 104 1-104 55-164 (220)
268 3e6j_A Variable lymphocyte rec 99.3 8.3E-12 2.8E-16 118.8 12.0 93 1-93 63-156 (229)
269 3rgz_A Protein brassinosteroid 99.3 1.5E-12 5.2E-17 146.4 8.0 82 25-106 631-718 (768)
270 3m19_A Variable lymphocyte rec 99.3 8.4E-12 2.9E-16 120.5 12.1 105 2-106 35-145 (251)
271 2o6s_A Variable lymphocyte rec 99.3 8.5E-12 2.9E-16 116.8 11.8 104 2-105 28-137 (208)
272 2v70_A SLIT-2, SLIT homolog 2 99.3 3.9E-12 1.3E-16 120.2 8.9 106 1-106 56-167 (220)
273 3rfs_A Internalin B, repeat mo 99.3 1.1E-11 3.8E-16 121.2 11.8 106 1-106 84-195 (272)
274 2wfh_A SLIT homolog 2 protein 99.3 5.6E-12 1.9E-16 116.5 8.5 89 1-89 53-143 (193)
275 3tm0_A Aminoglycoside 3'-phosp 99.3 1.8E-11 6.2E-16 118.9 12.4 144 269-424 12-212 (263)
276 3g39_A Variable lymphocyte rec 99.3 1.2E-11 4.1E-16 111.8 10.1 100 4-106 11-116 (170)
277 2o6r_A Variable lymphocyte rec 99.3 7.9E-12 2.7E-16 113.8 8.8 89 1-89 51-141 (177)
278 2r9u_A Variable lymphocyte rec 99.3 1.8E-11 6.1E-16 111.1 10.4 88 2-89 33-122 (174)
279 1ogq_A PGIP-2, polygalacturona 99.3 2.8E-12 9.4E-17 128.3 5.4 103 2-104 50-161 (313)
280 2ifg_A High affinity nerve gro 99.3 7.1E-12 2.4E-16 127.2 8.5 87 2-88 31-119 (347)
281 3rfs_A Internalin B, repeat mo 99.3 2.9E-11 9.9E-16 118.2 12.3 104 1-106 62-171 (272)
282 1p9a_G Platelet glycoprotein I 99.2 2.1E-11 7.2E-16 120.4 11.2 104 1-105 76-185 (290)
283 2o6s_A Variable lymphocyte rec 99.2 4.2E-11 1.4E-15 112.0 12.2 104 1-104 51-160 (208)
284 3j0a_A TOLL-like receptor 5; m 99.2 8.8E-12 3E-16 141.7 8.7 105 2-106 451-561 (844)
285 1ogq_A PGIP-2, polygalacturona 99.2 5.7E-12 2E-16 126.0 6.2 95 1-95 100-197 (313)
286 4fcg_A Uncharacterized protein 99.2 2E-11 6.7E-16 122.9 9.5 103 1-105 182-290 (328)
287 2o6q_A Variable lymphocyte rec 99.2 4.5E-11 1.5E-15 116.7 11.7 105 1-105 84-194 (270)
288 2je0_A Acidic leucine-rich nuc 99.2 7.2E-12 2.5E-16 110.5 5.2 102 2-105 17-126 (149)
289 2ell_A Acidic leucine-rich nuc 99.2 1.6E-11 5.6E-16 110.6 6.8 102 2-105 24-133 (168)
290 4g8a_A TOLL-like receptor 4; l 99.2 3E-11 1E-15 132.7 10.2 105 2-106 52-162 (635)
291 1p9a_G Platelet glycoprotein I 99.2 7.1E-11 2.4E-15 116.6 11.6 103 1-106 54-162 (290)
292 4fcg_A Uncharacterized protein 99.2 5.1E-11 1.7E-15 119.8 10.5 103 1-104 149-265 (328)
293 2je0_A Acidic leucine-rich nuc 99.2 1.9E-11 6.3E-16 107.9 6.2 87 1-89 41-130 (149)
294 2xot_A Amphoterin-induced prot 99.2 2.5E-11 8.6E-16 123.9 7.8 105 1-105 63-176 (361)
295 1ozn_A Reticulon 4 receptor; N 99.2 8.2E-11 2.8E-15 115.8 11.1 95 1-95 79-176 (285)
296 1dce_A Protein (RAB geranylger 99.2 4E-11 1.4E-15 129.4 9.6 100 3-106 442-547 (567)
297 1nd4_A Aminoglycoside 3'-phosp 99.2 5.3E-11 1.8E-15 115.3 9.5 135 273-424 22-213 (264)
298 2o6q_A Variable lymphocyte rec 99.2 1.3E-10 4.5E-15 113.4 12.1 106 1-106 60-171 (270)
299 2xot_A Amphoterin-induced prot 99.2 6.4E-11 2.2E-15 120.9 10.2 105 2-106 39-150 (361)
300 2ell_A Acidic leucine-rich nuc 99.2 3.9E-11 1.3E-15 108.1 7.4 87 1-89 48-137 (168)
301 3v47_A TOLL-like receptor 5B a 99.2 5.4E-11 1.8E-15 125.3 9.7 105 2-106 275-385 (455)
302 4g8a_A TOLL-like receptor 4; l 99.2 3.9E-11 1.3E-15 131.8 8.8 105 2-106 469-581 (635)
303 2z66_A Variable lymphocyte rec 99.2 3.9E-11 1.3E-15 119.4 7.8 106 1-106 125-237 (306)
304 1ozn_A Reticulon 4 receptor; N 99.2 5.3E-11 1.8E-15 117.1 8.7 106 1-106 104-215 (285)
305 4ezg_A Putative uncharacterize 99.1 5.3E-11 1.8E-15 110.3 7.8 87 1-89 65-153 (197)
306 1dce_A Protein (RAB geranylger 99.1 4.3E-11 1.5E-15 129.2 8.2 86 1-89 462-550 (567)
307 4b8c_D Glucose-repressible alc 99.1 2.1E-11 7.2E-16 135.7 5.2 92 1-94 246-338 (727)
308 3oja_B Anopheles plasmodium-re 99.1 1.7E-10 5.9E-15 125.9 11.2 105 1-105 74-184 (597)
309 2ifg_A High affinity nerve gro 99.1 1.1E-10 3.9E-15 118.2 9.1 100 5-106 11-117 (347)
310 2z62_A TOLL-like receptor 4, v 99.1 1.9E-10 6.6E-15 112.5 10.0 105 2-106 28-138 (276)
311 4b8c_D Glucose-repressible alc 99.1 1.1E-10 3.8E-15 129.8 8.7 102 1-105 223-329 (727)
312 3vq2_A TLR4, TOLL-like recepto 99.1 2.9E-10 9.8E-15 124.4 11.0 94 2-95 56-152 (606)
313 3v47_A TOLL-like receptor 5B a 99.1 2.3E-10 8E-15 120.4 9.7 106 1-106 298-409 (455)
314 2z62_A TOLL-like receptor 4, v 99.1 2.7E-10 9.4E-15 111.4 9.3 95 1-95 51-148 (276)
315 2z66_A Variable lymphocyte rec 99.1 2.2E-10 7.7E-15 113.9 8.7 106 1-106 100-213 (306)
316 3o6n_A APL1; leucine-rich repe 99.1 4.2E-10 1.5E-14 116.0 11.0 95 1-95 68-164 (390)
317 3oja_A Leucine-rich immune mol 99.0 1.1E-10 3.8E-15 124.0 6.0 104 1-105 119-227 (487)
318 3oja_A Leucine-rich immune mol 99.0 1.2E-10 4.1E-15 123.7 6.0 102 1-105 143-250 (487)
319 1wwl_A Monocyte differentiatio 99.0 1.5E-10 5.3E-15 115.5 6.4 86 1-87 94-188 (312)
320 3zyj_A Leucine-rich repeat-con 99.0 2.9E-10 9.9E-15 119.3 8.8 90 2-93 160-252 (440)
321 2z7x_B TOLL-like receptor 1, v 99.0 3E-10 1E-14 121.8 8.9 92 2-95 21-114 (520)
322 3oja_B Anopheles plasmodium-re 99.0 5.5E-10 1.9E-14 121.9 11.1 104 1-104 98-204 (597)
323 1a9n_A U2A', U2A'; complex (nu 99.0 1.6E-10 5.5E-15 105.0 5.7 100 1-105 18-126 (176)
324 2id5_A Lingo-1, leucine rich r 99.0 4.4E-10 1.5E-14 119.1 9.9 94 2-95 32-127 (477)
325 3dxp_A Putative acyl-COA dehyd 99.0 9.2E-10 3.2E-14 112.1 11.9 142 276-425 43-248 (359)
326 4glp_A Monocyte differentiatio 99.0 3.2E-10 1.1E-14 113.0 7.9 104 1-106 168-286 (310)
327 1a9n_A U2A', U2A'; complex (nu 99.0 2.7E-10 9.3E-15 103.4 6.8 86 2-90 42-130 (176)
328 1xku_A Decorin; proteoglycan, 99.0 5.6E-10 1.9E-14 112.3 9.7 88 2-93 171-260 (330)
329 4eco_A Uncharacterized protein 99.0 1.8E-10 6.1E-15 126.6 6.5 94 1-95 205-329 (636)
330 3zyi_A Leucine-rich repeat-con 99.0 3.8E-10 1.3E-14 118.8 8.7 92 1-94 170-264 (452)
331 4eco_A Uncharacterized protein 99.0 9.6E-11 3.3E-15 128.8 4.0 94 1-95 248-352 (636)
332 4ecn_A Leucine-rich repeat pro 99.0 1.7E-10 5.8E-15 129.9 6.0 93 3-95 324-514 (876)
333 3zyi_A Leucine-rich repeat-con 99.0 5.8E-10 2E-14 117.4 9.6 94 2-95 75-170 (452)
334 2z63_A TOLL-like receptor 4, v 99.0 3.8E-10 1.3E-14 122.3 8.5 106 1-106 395-508 (570)
335 2id5_A Lingo-1, leucine rich r 99.0 5.5E-10 1.9E-14 118.4 9.5 105 1-105 55-165 (477)
336 3a79_B TLR6, VLRB.59, TOLL-lik 99.0 6.5E-10 2.2E-14 120.4 9.9 102 2-105 52-159 (562)
337 4ezg_A Putative uncharacterize 99.0 5.2E-10 1.8E-14 103.6 7.7 86 1-87 87-174 (197)
338 3vq2_A TLR4, TOLL-like recepto 99.0 8.4E-10 2.9E-14 120.6 10.5 105 2-106 32-142 (606)
339 1wwl_A Monocyte differentiatio 99.0 6.8E-10 2.3E-14 110.8 8.5 106 1-107 172-289 (312)
340 2z80_A TOLL-like receptor 2, v 99.0 5.9E-10 2E-14 113.3 8.1 94 2-95 52-148 (353)
341 3t6q_A CD180 antigen; protein- 99.0 9.3E-10 3.2E-14 120.3 9.8 105 2-106 33-143 (606)
342 2ft3_A Biglycan; proteoglycan, 99.0 7E-10 2.4E-14 111.7 8.1 87 3-89 194-281 (332)
343 2z81_A CD282 antigen, TOLL-lik 99.0 6.9E-10 2.4E-14 119.8 8.6 94 2-95 26-122 (549)
344 2ft3_A Biglycan; proteoglycan, 99.0 1.2E-09 4.2E-14 109.8 9.9 93 2-95 54-146 (332)
345 3o6n_A APL1; leucine-rich repe 99.0 2.1E-09 7E-14 110.8 11.8 103 1-103 92-197 (390)
346 2xwt_C Thyrotropin receptor; s 99.0 5.3E-10 1.8E-14 106.9 6.8 88 2-90 31-122 (239)
347 1ziw_A TOLL-like receptor 3; i 99.0 1.2E-09 4.1E-14 121.1 10.6 94 2-95 25-120 (680)
348 4ecn_A Leucine-rich repeat pro 99.0 3.7E-10 1.3E-14 127.1 6.2 104 1-105 447-586 (876)
349 4glp_A Monocyte differentiatio 99.0 4.5E-10 1.5E-14 111.9 6.0 84 2-85 117-210 (310)
350 2z63_A TOLL-like receptor 4, v 99.0 1.3E-09 4.4E-14 118.2 9.9 83 3-85 29-113 (570)
351 2z80_A TOLL-like receptor 2, v 99.0 1E-09 3.5E-14 111.5 8.5 77 7-86 36-114 (353)
352 1xku_A Decorin; proteoglycan, 99.0 1.8E-09 6.1E-14 108.5 10.2 93 2-95 52-144 (330)
353 3zyj_A Leucine-rich repeat-con 98.9 1.4E-09 4.8E-14 114.0 9.6 94 2-95 64-159 (440)
354 3t6q_A CD180 antigen; protein- 98.9 1.5E-09 5.1E-14 118.7 10.1 87 1-87 56-144 (606)
355 2xwt_C Thyrotropin receptor; s 98.9 7.6E-10 2.6E-14 105.8 6.6 94 1-95 54-154 (239)
356 2z7x_B TOLL-like receptor 1, v 98.9 1.2E-09 4.2E-14 117.0 8.9 105 1-105 323-434 (520)
357 3o53_A Protein LRIM1, AGAP0063 98.9 7.5E-10 2.6E-14 110.7 6.1 98 2-104 34-132 (317)
358 3j0a_A TOLL-like receptor 5; m 98.9 1.2E-09 4E-14 124.2 8.2 91 2-92 73-168 (844)
359 2z81_A CD282 antigen, TOLL-lik 98.9 1.3E-09 4.6E-14 117.5 8.1 95 1-95 49-147 (549)
360 1ziw_A TOLL-like receptor 3; i 98.9 2.6E-09 8.9E-14 118.4 10.5 105 1-105 48-158 (680)
361 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 2.3E-09 8E-14 116.0 9.0 105 1-105 352-463 (562)
362 3o53_A Protein LRIM1, AGAP0063 98.9 1.4E-09 4.9E-14 108.6 6.5 103 2-105 120-227 (317)
363 1xeu_A Internalin C; cellular 98.9 6.9E-09 2.3E-13 100.7 10.9 81 1-86 40-120 (263)
364 3sg8_A APH(2'')-ID; antibiotic 98.9 1.7E-09 5.9E-14 107.4 6.6 184 276-475 25-287 (304)
365 1h6t_A Internalin B; cell adhe 98.9 6.3E-09 2.1E-13 102.6 10.6 82 1-87 67-149 (291)
366 1h6u_A Internalin H; cell adhe 98.9 6E-09 2.1E-13 103.6 10.4 84 1-89 84-168 (308)
367 1h6u_A Internalin H; cell adhe 98.9 2.8E-09 9.7E-14 106.0 8.0 100 1-105 106-208 (308)
368 1h6t_A Internalin B; cell adhe 98.9 6.7E-09 2.3E-13 102.4 10.6 82 1-87 45-127 (291)
369 1m9s_A Internalin B; cell inva 98.9 5.8E-09 2E-13 113.2 10.5 84 1-89 86-170 (605)
370 1xeu_A Internalin C; cellular 98.9 6.2E-09 2.1E-13 101.0 9.6 81 1-87 62-143 (263)
371 1ds9_A Outer arm dynein; leuci 98.8 1.6E-10 5.4E-15 107.2 -2.5 82 3-86 19-107 (198)
372 1m9s_A Internalin B; cell inva 98.8 1E-08 3.5E-13 111.2 10.0 100 1-107 108-212 (605)
373 3cvr_A Invasion plasmid antige 98.8 9.6E-09 3.3E-13 110.4 9.3 77 3-90 121-197 (571)
374 1o6v_A Internalin A; bacterial 98.8 1.1E-08 3.8E-13 108.0 8.7 82 1-87 264-346 (466)
375 3cvr_A Invasion plasmid antige 98.7 3.3E-09 1.1E-13 114.0 4.2 95 1-106 139-244 (571)
376 4fmz_A Internalin; leucine ric 98.7 2.1E-08 7.1E-13 101.4 9.7 88 2-94 221-309 (347)
377 4fmz_A Internalin; leucine ric 98.7 1.9E-08 6.5E-13 101.7 9.3 85 1-89 242-328 (347)
378 1o6v_A Internalin A; bacterial 98.7 3.5E-08 1.2E-12 104.1 10.6 81 2-87 221-302 (466)
379 1ds9_A Outer arm dynein; leuci 98.7 1.1E-09 3.6E-14 101.5 -1.1 83 1-87 47-130 (198)
380 3bz5_A Internalin-J, INLJ; leu 98.7 5.2E-08 1.8E-12 102.4 10.9 79 1-86 147-226 (457)
381 3bz5_A Internalin-J, INLJ; leu 98.7 5.3E-08 1.8E-12 102.3 10.3 80 1-87 41-121 (457)
382 4ay9_X Follicle-stimulating ho 98.7 2.6E-08 8.8E-13 100.9 7.4 89 2-90 30-122 (350)
383 1jl5_A Outer protein YOPM; leu 98.6 8.3E-08 2.8E-12 100.7 11.0 78 3-89 112-189 (454)
384 3g06_A SSPH2 (leucine-rich rep 98.6 1.9E-08 6.5E-13 109.4 5.9 63 26-95 221-283 (622)
385 1jl5_A Outer protein YOPM; leu 98.6 5.4E-09 1.9E-13 109.8 0.1 100 2-105 11-124 (454)
386 3r70_A Aminoglycoside phosphot 98.6 3.8E-07 1.3E-11 91.1 12.8 136 272-425 38-237 (320)
387 2ca6_A RAN GTPase-activating p 98.5 1.1E-08 3.7E-13 105.2 0.6 86 2-87 159-259 (386)
388 2ca6_A RAN GTPase-activating p 98.5 1.2E-08 4.1E-13 104.8 0.9 106 1-106 186-317 (386)
389 3rw6_A Nuclear RNA export fact 98.5 2.5E-08 8.6E-13 95.9 1.7 83 7-89 148-237 (267)
390 3goz_A Leucine-rich repeat-con 98.5 3.4E-08 1.2E-12 100.5 2.7 88 3-90 23-127 (362)
391 3g06_A SSPH2 (leucine-rich rep 98.5 3.6E-07 1.2E-11 99.3 10.9 55 3-65 62-116 (622)
392 3rw6_A Nuclear RNA export fact 98.5 6.7E-08 2.3E-12 92.9 4.0 64 1-66 169-236 (267)
393 2ast_B S-phase kinase-associat 98.5 2.4E-08 8.2E-13 100.4 0.8 84 2-86 70-157 (336)
394 3d1u_A Putative fructosamine-3 98.4 1.5E-06 5E-11 85.2 12.0 76 275-356 19-97 (288)
395 4gkh_A Aminoglycoside 3'-phosp 98.4 1.5E-06 5E-11 84.4 12.0 134 278-424 31-222 (272)
396 2ast_B S-phase kinase-associat 98.4 6.8E-08 2.3E-12 97.0 1.0 91 1-91 117-217 (336)
397 3goz_A Leucine-rich repeat-con 98.3 1.3E-07 4.4E-12 96.3 1.9 87 3-89 52-155 (362)
398 4ay9_X Follicle-stimulating ho 98.3 8.3E-07 2.8E-11 89.7 7.8 88 5-95 12-103 (350)
399 3tdw_A Gentamicin resistance p 98.3 5.4E-06 1.8E-10 82.0 13.0 136 276-425 24-224 (306)
400 3ovc_A Hygromycin-B 4-O-kinase 98.3 5.9E-06 2E-10 83.8 12.6 77 273-357 43-122 (362)
401 3ats_A Putative uncharacterize 98.1 1.8E-05 6.1E-10 80.0 13.2 83 276-358 25-122 (357)
402 2q83_A YTAA protein; 2635576, 98.1 2.5E-05 8.5E-10 78.3 13.9 144 277-424 38-251 (346)
403 1z7x_W Ribonuclease inhibitor; 98.1 2.8E-07 9.7E-12 96.8 -1.3 86 2-87 256-356 (461)
404 1z7x_W Ribonuclease inhibitor; 98.0 4.9E-07 1.7E-11 95.0 -0.6 105 1-105 283-411 (461)
405 3un9_A NLR family member X1; l 98.0 9.3E-07 3.2E-11 90.0 0.4 85 2-86 126-225 (372)
406 3sb4_A Hypothetical leucine ri 98.0 7.3E-06 2.5E-10 82.0 6.8 93 1-95 225-320 (329)
407 3un9_A NLR family member X1; l 97.9 1.6E-06 5.4E-11 88.3 -0.3 85 2-86 101-197 (372)
408 1io0_A Tropomodulin; LRR prote 97.8 8.2E-06 2.8E-10 74.2 2.5 86 2-87 36-138 (185)
409 3f7w_A Putative fructosamine-3 97.8 0.00017 5.7E-09 70.5 11.9 78 272-355 16-96 (288)
410 3jr1_A Putative fructosamine-3 97.7 0.00017 5.8E-09 71.1 11.8 75 276-356 41-118 (312)
411 2olc_A MTR kinase, methylthior 97.7 0.00021 7.1E-09 73.3 12.5 77 276-354 35-120 (397)
412 3ogk_B Coronatine-insensitive 97.7 8.6E-06 2.9E-10 88.4 1.4 87 1-87 402-503 (592)
413 1io0_A Tropomodulin; LRR prote 97.7 6.6E-06 2.3E-10 74.8 0.4 84 2-85 65-164 (185)
414 2pyw_A Uncharacterized protein 97.6 0.00034 1.2E-08 72.3 11.6 77 394-471 231-312 (420)
415 3ogk_B Coronatine-insensitive 97.5 2.1E-05 7.1E-10 85.3 1.5 89 3-92 139-239 (592)
416 2p1m_B Transport inhibitor res 97.5 2.2E-05 7.7E-10 85.0 0.8 86 1-87 396-496 (594)
417 2ppq_A HSK, HK, homoserine kin 97.4 0.0059 2E-07 60.3 17.1 159 261-424 7-216 (322)
418 1zyl_A Hypothetical protein YI 97.2 0.0051 1.7E-07 60.9 14.7 142 277-424 32-222 (328)
419 3rfe_A Platelet glycoprotein I 97.2 0.00046 1.6E-08 58.4 5.7 56 6-63 12-68 (130)
420 3sb4_A Hypothetical leucine ri 97.2 0.00037 1.3E-08 69.4 5.9 77 1-79 249-328 (329)
421 3dxq_A Choline/ethanolamine ki 97.1 0.0041 1.4E-07 60.9 13.0 71 276-356 23-95 (301)
422 3csv_A Aminoglycoside phosphot 97.1 0.0026 9E-08 63.2 11.5 32 394-425 182-217 (333)
423 2p1m_B Transport inhibitor res 97.1 0.00011 3.7E-09 79.6 1.0 67 23-89 102-173 (594)
424 2ra8_A Uncharacterized protein 97.0 0.00013 4.5E-09 73.6 0.7 87 1-87 192-294 (362)
425 2yle_A Protein spire homolog 1 97.0 0.0029 9.9E-08 57.8 9.2 98 355-470 34-131 (229)
426 3e4g_A ATP synthase subunit S, 96.9 0.00028 9.4E-09 62.8 2.1 81 3-83 62-150 (176)
427 1nw1_A Choline kinase (49.2 KD 96.9 0.0032 1.1E-07 65.1 10.2 73 276-356 78-159 (429)
428 4fdw_A Leucine rich hypothetic 96.8 0.0021 7.1E-08 65.8 8.1 91 2-95 248-345 (401)
429 3feg_A Choline/ethanolamine ki 96.8 0.0059 2E-07 61.7 11.0 141 277-424 56-253 (379)
430 3i1a_A Spectinomycin phosphotr 96.7 0.0093 3.2E-07 59.5 11.5 31 395-425 206-236 (339)
431 3rfe_A Platelet glycoprotein I 96.7 0.002 6.8E-08 54.5 5.5 56 29-86 11-69 (130)
432 2ra8_A Uncharacterized protein 96.6 0.00023 7.9E-09 71.8 -0.9 87 1-87 218-322 (362)
433 3c5i_A Choline kinase; choline 96.5 0.011 3.7E-07 59.7 10.5 74 276-356 38-121 (369)
434 2qg7_A Ethanolamine kinase PV0 96.4 0.025 8.4E-07 58.7 12.8 74 276-356 113-188 (458)
435 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0024 8.2E-08 57.8 3.1 82 2-83 41-137 (197)
436 3f2s_A CK, chetk-alpha, cholin 95.8 0.043 1.5E-06 55.7 10.7 144 277-424 58-279 (401)
437 4fdw_A Leucine rich hypothetic 95.3 0.019 6.6E-07 58.6 6.2 91 1-93 270-366 (401)
438 3mes_A Choline kinase; malaria 95.3 0.083 2.9E-06 54.1 10.8 74 276-356 75-157 (424)
439 3e4g_A ATP synthase subunit S, 93.6 0.034 1.2E-06 49.3 2.9 68 18-85 53-128 (176)
440 1pgv_A TMD-1, tropomodulin TMD 93.4 0.022 7.4E-07 51.6 1.2 83 2-84 70-169 (197)
441 4fs7_A Uncharacterized protein 93.2 0.098 3.4E-06 53.0 6.0 78 2-82 297-376 (394)
442 4gt6_A Cell surface protein; l 92.7 0.21 7.1E-06 50.6 7.5 78 2-82 265-344 (394)
443 4gt6_A Cell surface protein; l 92.7 0.1 3.5E-06 52.9 5.2 81 1-84 287-369 (394)
444 4h09_A Hypothetical leucine ri 91.3 0.22 7.6E-06 50.0 5.8 79 2-82 240-320 (379)
445 3g15_A CK, chetk-alpha, cholin 90.9 0.087 3E-06 53.6 2.3 29 396-424 245-279 (401)
446 4fs7_A Uncharacterized protein 89.4 0.31 1.1E-05 49.3 4.9 58 1-60 319-376 (394)
447 4h09_A Hypothetical leucine ri 88.9 0.64 2.2E-05 46.5 6.8 90 2-94 217-308 (379)
448 4ann_A ESSB; membrane protein, 88.6 1.5 5.2E-05 39.8 8.3 116 327-476 43-158 (215)
449 2ks1_B Epidermal growth factor 88.4 0.84 2.9E-05 29.7 4.6 11 150-160 13-23 (44)
450 2ks1_B Epidermal growth factor 87.6 1 3.5E-05 29.3 4.6 23 147-169 13-35 (44)
451 3cxl_A N-chimerin; SH2, RHO-GA 86.1 0.081 2.8E-06 55.0 -1.9 63 274-339 145-214 (463)
452 2l2t_A Receptor tyrosine-prote 84.6 1.2 4.2E-05 28.9 3.9 10 151-160 13-22 (44)
453 2l2t_A Receptor tyrosine-prote 84.6 0.44 1.5E-05 31.0 1.7 23 147-169 12-34 (44)
454 2k1k_A Ephrin type-A receptor 84.1 1.2 4.1E-05 28.0 3.6 15 146-160 8-22 (38)
455 4ano_A ESSB; membrane protein, 83.3 3.7 0.00013 37.4 8.0 115 327-476 48-163 (219)
456 2k1k_A Ephrin type-A receptor 78.6 0.57 2E-05 29.5 0.7 25 143-167 9-33 (38)
457 2jwa_A Receptor tyrosine-prote 72.7 4.8 0.00016 26.1 3.8 29 150-179 13-41 (44)
458 2k9y_A Ephrin type-A receptor 68.2 2.1 7.3E-05 27.3 1.5 13 150-162 15-27 (41)
459 2klu_A T-cell surface glycopro 52.5 13 0.00044 26.2 3.2 21 150-170 12-32 (70)
460 2lz0_A Uncharacterized protein 44.4 30 0.001 26.9 4.8 47 12-59 6-52 (100)
461 2l34_A TYRO protein tyrosine k 33.6 44 0.0015 20.1 3.1 19 147-165 5-23 (33)
462 3ls8_A Phosphatidylinositol 3- 33.4 4.5E+02 0.015 27.7 13.5 46 372-424 454-501 (614)
463 1cja_A Protein (actin-fragmin 30.9 1.4E+02 0.0046 29.0 7.8 79 343-425 156-237 (342)
464 1zza_A Stannin, AG8_1; helix, 25.8 68 0.0023 22.9 3.4 20 157-176 23-42 (90)
465 2knc_B Integrin beta-3; transm 24.6 80 0.0027 23.3 3.9 6 152-157 15-20 (79)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3e-56 Score=442.87 Aligned_cols=259 Identities=24% Similarity=0.415 Sum_probs=214.7
Q ss_pred CCccccceeccCCceEEEEEEeC------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
++|.+.+.||+|+||.||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+.+..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 46788899999999999999864 4788999999754 345567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcccC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCce
Q 008055 345 LLVYEFRKNGSLHDFLHLSD---------EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
++|||||++|+|.++|+... .....++|.+++.|+.|||.||+|||++ +|+||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997432 2345799999999999999999999976 99999999999999999999
Q ss_pred EEecccccccCCCCCccc---ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcc
Q 008055 416 QLSDCGLASNMPNADEAL---NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 491 (579)
||+|||+|+......... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||.......
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--------- 238 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--------- 238 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---------
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 999999998654433221 2346789999999999999999999999999999999 999997643211
Q ss_pred ccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 492 PQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
+...+........|..++.++.+|+.+||+.||++||||++|++.|+++.+.
T Consensus 239 --------~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 239 --------VIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp --------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1111111222345667788999999999999999999999999999988754
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-55 Score=443.57 Aligned_cols=258 Identities=25% Similarity=0.416 Sum_probs=209.8
Q ss_pred CCccccceeccCCceEEEEEEeC------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
.+|.+.+.||+|+||.||+|+++ +++.||||+++.. .....+.|.+|++++++++|||||+++|+|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45777899999999999999864 4789999999754 345567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcccCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC
Q 008055 345 LLVYEFRKNGSLHDFLHLSDE-----------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 413 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~ 413 (579)
++|||||++|+|.++++.... ...+++|.+++.|+.|||.||+|||++ +|+||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999975432 234699999999999999999999976 999999999999999999
Q ss_pred ceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhh
Q 008055 414 NPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRW 489 (579)
Q Consensus 414 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 489 (579)
.+||+|||+++........ ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.......
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------- 268 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------- 268 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-------
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 9999999999866443322 23456789999999999999999999999999999999 999997643211
Q ss_pred ccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHH
Q 008055 490 ATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQ 550 (579)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 550 (579)
+...+....+...|..++.++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus 269 ----------~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 269 ----------AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp ----------HHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----------HHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 111111122334566778899999999999999999999999999998875
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-55 Score=436.17 Aligned_cols=258 Identities=25% Similarity=0.438 Sum_probs=208.7
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|.+.+.||+|+||+||+|.+++ .||||+++......+..+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4577888999999999999998753 59999998766666777899999999999999999999998864 56899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
||++|+|.++++. ....+++.+++.|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999973 345699999999999999999999976 9999999999999999999999999999865432
Q ss_pred C---cccccCCCCCccCcccccc---CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh-
Q 008055 430 D---EALNNDAGSGYGAPEVAMS---GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK- 502 (579)
Q Consensus 430 ~---~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 502 (579)
. ......||+.|||||++.. ..|+.++|||||||++|||+||+.||......... .. .+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~--~~----------~~~~~ 253 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IF----------MVGRG 253 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HH----------HHHTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH--HH----------HHhcC
Confidence 2 2234578999999999964 45899999999999999999999999764322110 00 0000
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
...+. ....+..++..+.+|+.+||+.||++||||.||++.|+.+.
T Consensus 254 ~~~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 254 YASPD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCCCC-STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCCCC-cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11111 12234567789999999999999999999999999998764
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.2e-55 Score=438.55 Aligned_cols=255 Identities=25% Similarity=0.431 Sum_probs=211.4
Q ss_pred CccccceeccCCceEEEEEEeC------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
++++.+.||+|+||+||+|.+. +++.||||+++... .....+.|.+|+.++++++|||||+++|+|.+.+..+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4566789999999999999863 46899999997543 3345678999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC
Q 008055 346 LVYEFRKNGSLHDFLHLSDE------------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 413 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~ 413 (579)
+|||||++|+|.++|+.... ....++|..++.|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 99999999999999964321 124689999999999999999999976 999999999999999999
Q ss_pred ceEEecccccccCCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhh
Q 008055 414 NPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRW 489 (579)
Q Consensus 414 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 489 (579)
.+||+|||+++....... .....+|+.|||||++.++.|+.++|||||||++|||+| |..||......
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-------- 254 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-------- 254 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--------
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--------
Confidence 999999999986543322 223456789999999999999999999999999999999 89999764321
Q ss_pred ccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q 008055 490 ATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVR 547 (579)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 547 (579)
.+...+........|..++..+.+|+.+||+.||++||||+||++.|+.
T Consensus 255 ---------~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 255 ---------DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp ---------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---------HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1111111222334567788899999999999999999999999999874
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.6e-55 Score=439.29 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=207.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||+||+|+.. +|+.||||++..........+.+.+|+.++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999764 69999999998877766777889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
||+||+|.+++.. .....+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~--~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHH--cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999963 2345678999999999999999999976 9999999999999999999999999999876543
Q ss_pred Cc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 430 DE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 430 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
.. .....||+.|||||++.+..|+.++|||||||++|||+||+.||....... .+.+++....
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----------------~~~~i~~~~~ 242 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN----------------LVLKIISGSF 242 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------HHHHHHHTCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----------------HHHHHHcCCC
Confidence 22 234568999999999999999999999999999999999999997643211 1111111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...+...+.++.+|+.+||+.||++|||+.|+++
T Consensus 243 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 -PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1223455678999999999999999999999985
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.1e-54 Score=436.86 Aligned_cols=272 Identities=24% Similarity=0.423 Sum_probs=223.0
Q ss_pred cCHHHHHHHhCCccccceeccCCceEEEEEEeCC------CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCC-CCccc
Q 008055 261 YSIADLQMATGSFNVENLLGEGTFGRVYRAQFAD------GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHH-PNIME 333 (579)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~ 333 (579)
+...++++..++|++.+.||+|+||.||+|.+.. ++.||||+++.... ....+.|.+|+.++.+++| ||||+
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4556666777899999999999999999997642 36899999976543 3446789999999999965 89999
Q ss_pred eeeEEeeC-CeEEEEEEecCCCChhhhhcccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEc
Q 008055 334 LVGYCSEY-GQHLLVYEFRKNGSLHDFLHLSDE------------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHK 400 (579)
Q Consensus 334 l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~ 400 (579)
++|+|.+. +..++|||||++|+|.++|+.... ....+++.+++.|+.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 99999764 578999999999999999974322 134589999999999999999999976 99999
Q ss_pred CCCCCCEEEcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCC
Q 008055 401 NIKSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFD 476 (579)
Q Consensus 401 Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~ 476 (579)
||||+|||+++++.+||+|||+|+........ ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876543322 23346778999999999999999999999999999998 999997
Q ss_pred CCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 477 SSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
..... ..+...+....+...|..++.++.+++.+||+.||++|||+.||++.|+.+++..
T Consensus 290 ~~~~~----------------~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 290 GVKID----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp TCCCS----------------HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCHH----------------HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 64321 1111222222334456667789999999999999999999999999999998754
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-53 Score=428.20 Aligned_cols=258 Identities=24% Similarity=0.257 Sum_probs=211.2
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
+.|++.+.||+|+||.||+|+++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..|+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46788899999999999999875 689999999976442 2468999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC-ceEEecccccccCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL-NPQLSDCGLASNMPN 428 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~~~~~~~ 428 (579)
||+||+|.++++. ...+++.++..|+.||+.||+|||++ +|+||||||+||||+.+| .+||+|||+|+....
T Consensus 131 y~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999963 34689999999999999999999965 999999999999999987 699999999987654
Q ss_pred CCc------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 429 ADE------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 429 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
... .....||+.|||||++.+..|+.++|||||||++|||+||+.||......... ..+..
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-------------~~i~~ 270 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC-------------LKIAS 270 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH-------------HHHHH
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-------------HHHHc
Confidence 322 12246899999999999999999999999999999999999999764321100 01110
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccccc
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKR 557 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~~~ 557 (579)
.+......+..++..+.+++.+||+.||++|||+.|+++.|...++....-++
T Consensus 271 --~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~h 323 (336)
T 4g3f_A 271 --EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKS 323 (336)
T ss_dssp --SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCS
T ss_pred --CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccC
Confidence 00001123455677899999999999999999999999999999887665444
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-53 Score=420.11 Aligned_cols=247 Identities=21% Similarity=0.338 Sum_probs=201.0
Q ss_pred cccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee----CCeEEEEE
Q 008055 274 NVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE----YGQHLLVY 348 (579)
Q Consensus 274 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 348 (579)
++.+.||+|+||+||+|.+. ++..||+|++..........+.|.+|+.++++++|||||+++++|.+ .+..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999765 68899999998766666667889999999999999999999999865 35689999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-CCceEEecccccccCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN-ELNPQLSDCGLASNMP 427 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~~~~~~ 427 (579)
|||++|+|.++++. ...+++..+..|+.||+.||+|||++ ..+|+||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999963 35689999999999999999999976 223999999999999984 7899999999998643
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc-Cc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV-DP 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 506 (579)
. .......||+.|||||++. ++|+.++|||||||++|||+||+.||....... .+...+ ..
T Consensus 184 ~-~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~----------------~~~~~i~~~ 245 (290)
T 3fpq_A 184 A-SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA----------------QIYRRVTSG 245 (290)
T ss_dssp T-TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----------------HHHHHHTTT
T ss_pred C-CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH----------------HHHHHHHcC
Confidence 3 3344567899999999886 469999999999999999999999996533211 111111 11
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.....++...+.++.+|+.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 246 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111122334467899999999999999999999875
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.8e-53 Score=428.13 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=207.8
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
..|++.+.||+|+||+||+|.++ +|+.||||++..... ...+.+.+|+.+++.++|||||+++++|.+.+..|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46999999999999999999875 699999999965432 234567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
||+||+|.+++.. ..+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 152 y~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 152 FLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999999862 3589999999999999999999976 9999999999999999999999999999876544
Q ss_pred C-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 430 D-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 430 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
. ......||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+.....+.
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-------------~~i~~~~~~~- 289 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-------------KMIRDNLPPR- 289 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------------HHHHHSSCCC-
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-------------HHHHcCCCCC-
Confidence 3 344567899999999999999999999999999999999999999764322110 0111111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...+...+.++.+|+.+||..||++|||+.|+++
T Consensus 290 -~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 290 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1123445678999999999999999999999875
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-53 Score=423.59 Aligned_cols=272 Identities=23% Similarity=0.325 Sum_probs=204.5
Q ss_pred CccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC----eEEEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG----QHLLV 347 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv 347 (579)
+|.+.+.||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++++|.+.+ ..++|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 577889999999999999988 58999999996432 11222334566667899999999999997654 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEV-----CSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
||||++|+|.++++. .+++|..+..++.|++.||+|||++ +.++|+||||||+|||++.++.+||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 999999999999973 4589999999999999999999964 134899999999999999999999999999
Q ss_pred cccCCCCCcc-----cccCCCCCccCccccccC------CCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcc
Q 008055 423 ASNMPNADEA-----LNNDAGSGYGAPEVAMSG------QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 423 ~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 491 (579)
++........ ....+|+.|||||++.+. .++.++|||||||++|||+||.+||....... ..+..+..
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~-~p~~~~~~ 233 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ-LPYYDLVP 233 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC-CTTTTTSC
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccc-ccchhccc
Confidence 9765443221 234678999999999754 47789999999999999999998885432210 01111111
Q ss_pred ccccChhHH-hhhcCccccCCCC-----hhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 492 PQLHDIDAL-AKMVDPALKGLYP-----VKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 492 ~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
.......+ ..+.+..+++..| .+++..+.+|+.+||+.||++||||.||++.|+++.++.++
T Consensus 234 -~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~i 301 (303)
T 3hmm_A 234 -SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp -SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred -ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCC
Confidence 11111222 2223334444333 24567899999999999999999999999999999877654
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.9e-54 Score=424.02 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=208.8
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||+||+|+.. +|+.||||++.+... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 36999999999999999999764 789999999965432 2234577899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
|||+||+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999963 34689999999999999999999976 999999999999999999999999999987643
Q ss_pred CC---cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 429 AD---EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 429 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.. ...+.+||+.|||||++.+..|+.++||||+||++|||++|+.||....... .+..+..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----------------~~~~i~~ 248 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL----------------IFAKIIK 248 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHH
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHc
Confidence 32 2345678999999999999999999999999999999999999997643211 1111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ...+|...+.++.+|+.+||+.||++|||+.|++.
T Consensus 249 ~--~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 249 L--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp T--CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred C--CCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1 11244556678999999999999999999999753
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.8e-53 Score=412.12 Aligned_cols=247 Identities=27% Similarity=0.427 Sum_probs=193.3
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||+||+|... +|+.||||++.+.... ......+.+|+.++++++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999764 6999999999765433 344577899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+ +|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 6899999863 35699999999999999999999976 999999999999999999999999999987766
Q ss_pred CCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.....+..||+.|||||++.+..+ +.++||||+||++|||+||+.||........ ...+...
T Consensus 165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~----------------~~~i~~~- 227 (275)
T 3hyh_A 165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL----------------FKNISNG- 227 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHHHHT-
T ss_pred CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH----------------HHHHHcC-
Confidence 555566789999999999998886 5799999999999999999999976432110 0011000
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...++...+.++.+|+.+||+.||++|||+.|+++
T Consensus 228 -~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 228 -VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11234455678999999999999999999999986
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.8e-52 Score=429.76 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=208.0
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
+.|++.+.||+|+||.||+|.++ +|+.||||++..... ...+.+.+|+.+++.++|||||+++++|.+.+.+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 46999999999999999999875 699999999976543 234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
||+||+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+.+...
T Consensus 229 y~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 229 FLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp CCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 9999999999862 3589999999999999999999976 9999999999999999999999999999876543
Q ss_pred C-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 430 D-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 430 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+.....+.+
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-------------~~i~~~~~~~~ 367 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-------------KMIRDNLPPRL 367 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------------HHHHHSCCCCC
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-------------HHHHcCCCCCC
Confidence 3 344567899999999999999999999999999999999999999764322110 11111111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+...+.++.+|+.+||..||++|||+.|+++
T Consensus 368 --~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 368 --KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122345678999999999999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.7e-53 Score=419.67 Aligned_cols=243 Identities=24% Similarity=0.333 Sum_probs=197.6
Q ss_pred CCccccceeccCCceEEEEEEeC----CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA----DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
++|++.+.||+|+||+||+|+.. .++.||||++++..........+.+|+.++++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 36999999999999999999763 46899999997655444444578889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
|||||+||+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999963 34689999999999999999999976 9999999999999999999999999999865
Q ss_pred CCCC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 427 PNAD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 427 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.... ...+..||+.|||||++.+..|+.++|||||||++|||+||+.||....... .+..+..
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----------------~~~~i~~ 240 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----------------TMTMILK 240 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHH
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----------------HHHHHHc
Confidence 4333 3445678999999999999999999999999999999999999997643221 1111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCCh
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPM 538 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 538 (579)
. ...+|...+.++.+|+.+||+.||++|||+
T Consensus 241 ~--~~~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 241 A--KLGMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred C--CCCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 112455566789999999999999999995
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3e-50 Score=400.38 Aligned_cols=245 Identities=23% Similarity=0.378 Sum_probs=187.7
Q ss_pred CccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC--------
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG-------- 342 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 342 (579)
+|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|+.++++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 5889999999999999999865 78999999997544 2344577899999999999999999999987544
Q ss_pred ----eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEe
Q 008055 343 ----QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLS 418 (579)
Q Consensus 343 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~ 418 (579)
..|+|||||++|+|.+++.... ......+..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999996321 122356677889999999999999976 99999999999999999999999
Q ss_pred cccccccCCCCCc-------------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhh
Q 008055 419 DCGLASNMPNADE-------------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS 485 (579)
Q Consensus 419 Dfg~~~~~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~ 485 (579)
|||+|+....... .....||+.|||||++.+..|+.++|||||||++|||++ ||...... .
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-~-- 234 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-V-- 234 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-H--
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-H--
Confidence 9999987644321 123468999999999999999999999999999999996 77532110 0
Q ss_pred hhhhccccccChhHHhhhcCccccCCCC---hhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 486 LVRWATPQLHDIDALAKMVDPALKGLYP---VKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+..... ..+| ......+.+|+.+||+.||++|||+.|+++
T Consensus 235 ------------~~~~~~~~----~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 ------------RTLTDVRN----LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ------------HHHHHHHT----TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------------HHHHHHhc----CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01111111 1122 223345678999999999999999999875
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=402.76 Aligned_cols=265 Identities=20% Similarity=0.323 Sum_probs=204.8
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee------CCe
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE------YGQ 343 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 343 (579)
++|++.+.||+|+||+||+|.+. +|+.||||+++.........+.+.+|+.+|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 47999999999999999999764 79999999998776666667788999999999999999999998753 367
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.|+|||||+ |+|.+++. ....+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999995 68999986 345799999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCC-----CcccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhc-ccccc
Q 008055 424 SNMPNA-----DEALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWA-TPQLH 495 (579)
Q Consensus 424 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~-~~~~~ 495 (579)
+.+... .......||+.|||||++.+. .++.++||||+||++|||++|++||.+...... ..+.... .+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 865432 223356789999999998875 469999999999999999999999976543211 1111111 11100
Q ss_pred C--------hhHHhhhcCccccCC---CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 496 D--------IDALAKMVDPALKGL---YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 496 ~--------~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. .........+..... .....+.++.+|+.+||..||++|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 000000000000000 01123467899999999999999999999875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.7e-47 Score=389.35 Aligned_cols=261 Identities=22% Similarity=0.340 Sum_probs=198.2
Q ss_pred HhCCccccceeccCCceEEEEEEeC----CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCe
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA----DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 343 (579)
..++|++.+.||+|+||+||+|+.+ .++.||+|++.... ....+.+|+++++.+ +|||||++++++.+.+.
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 4568999999999999999999753 46889999986543 245678899999888 79999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-CceEEecccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE-LNPQLSDCGL 422 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~ 422 (579)
.|+|||||++|+|.++++ .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+|||+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 999999999999999984 388999999999999999999976 99999999999999877 7999999999
Q ss_pred cccCCCCC-----------------------------cccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCC
Q 008055 423 ASNMPNAD-----------------------------EALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGR 472 (579)
Q Consensus 423 ~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~ 472 (579)
|+...... ......||++|+|||++.+. .|+.++||||+||++|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 97543321 12234689999999999875 4899999999999999999999
Q ss_pred CCCCCCCchhhh--hhhhhcc------------------cc--ccChhHHhhhc---C---ccc---------cCCCChh
Q 008055 473 KPFDSSRPRLEQ--SLVRWAT------------------PQ--LHDIDALAKMV---D---PAL---------KGLYPVK 515 (579)
Q Consensus 473 ~p~~~~~~~~~~--~~~~~~~------------------~~--~~~~~~~~~~~---~---~~~---------~~~~~~~ 515 (579)
.||........+ .+..... .. ..+.....+.. + +.. .......
T Consensus 245 ~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 324 (361)
T 4f9c_A 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNE 324 (361)
T ss_dssp SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTT
T ss_pred CCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccccccc
Confidence 999654432211 0100000 00 00001110000 0 000 0011123
Q ss_pred hHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 516 SLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 516 ~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+.++.+|+.+||+.||++|||++|+++
T Consensus 325 is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 325 VPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 4567899999999999999999999874
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.4e-47 Score=385.13 Aligned_cols=280 Identities=34% Similarity=0.624 Sum_probs=231.8
Q ss_pred HHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 266 LQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 266 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
+...+++|++.+.||+|+||.||+|.+++++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 344677899999999999999999998889999999987553 344678899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 99999999999999975544455799999999999999999999976 999999999999999999999999999976
Q ss_pred CCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 426 MPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 426 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
...... .....++..|+|||++.+..++.++|||||||++|||++|+.||.............|.... .....+..
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 267 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQ 267 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH-HTTTCCCS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc-cccccHHH
Confidence 443221 12234677999999999999999999999999999999999999765443333333332211 11112334
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
.+++......+...+..+.+++.+||+.||++|||+.++++.|+.+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 4555566667788899999999999999999999999999999998853
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.3e-47 Score=410.23 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=210.2
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|+.+|+.++|||||+++++|.+.+..|+|||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 57999999999999999999765 79999999997643 3345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC--CceEEecccccccCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE--LNPQLSDCGLASNMP 427 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfg~~~~~~ 427 (579)
||+||+|.+++. .....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++.+.
T Consensus 235 ~~~gg~L~~~i~---~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 235 FMSGGELFEKVA---DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCCBHHHHHT---CTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred ecCCCcHHHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 999999999985 2345689999999999999999999976 99999999999999854 899999999999887
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc-
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP- 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 506 (579)
.........||+.|||||++.+..|+.++|||||||++|||++|+.||........ +..+...
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----------------~~~i~~~~ 372 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----------------LRNVKSCD 372 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----------------HHHHHTTC
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----------------HHHHHhCC
Confidence 76666677899999999999999999999999999999999999999976543211 1111110
Q ss_pred -cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 -ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 -~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+........+.++.+||.+||+.||++|||+.|+++
T Consensus 373 ~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 373 WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111112234568899999999999999999999975
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.7e-47 Score=408.70 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=202.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC----CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL----PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
.++|++.+.||+|+||.||+|+.+ +|+.||||++.+... ..........++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 357999999999999999999775 699999999965322 112223334456677788999999999999999999
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
|+|||||+||+|.++|.. ...+++..+..++.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999963 34689999999999999999999965 99999999999999999999999999998
Q ss_pred cCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhh
Q 008055 425 NMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKM 503 (579)
Q Consensus 425 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
..... ...+.+||+.|||||++.. ..|+.++|||||||++|||++|++||..........+ ....
T Consensus 341 ~~~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i-------------~~~i 406 (689)
T 3v5w_A 341 DFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-------------DRMT 406 (689)
T ss_dssp ECSSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHH-------------HHHH
T ss_pred ecCCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-------------HHhh
Confidence 76543 3456789999999999974 5799999999999999999999999965322111111 0011
Q ss_pred cCccccCCCChhhHHHHHHHHHhcCCCCCCCCCC-----hHHHHH
Q 008055 504 VDPALKGLYPVKSLSRFADVIALCVQPEPEFRPP-----MSEVVQ 543 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 543 (579)
.. ....+|...+.++.+|+.+||..||++|++ +.||++
T Consensus 407 ~~--~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 407 LT--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HH--CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cC--CCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 10 112345556678999999999999999998 567653
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-46 Score=382.16 Aligned_cols=288 Identities=37% Similarity=0.631 Sum_probs=238.9
Q ss_pred ccccCHHHHHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeE
Q 008055 258 VTSYSIADLQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGY 337 (579)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 337 (579)
...++..++....++|++.+.||+|+||.||+|...+++.||||++...... .....+.+|+.+++.++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4567889999999999999999999999999999888999999999765432 223368899999999999999999999
Q ss_pred EeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEE
Q 008055 338 CSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 417 (579)
Q Consensus 338 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl 417 (579)
+.+.+..++||||+++|+|.++++........+++..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999999866556667999999999999999999999765559999999999999999999999
Q ss_pred ecccccccCCCCCc--ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCc--hhhhhhhhhcccc
Q 008055 418 SDCGLASNMPNADE--ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRP--RLEQSLVRWATPQ 493 (579)
Q Consensus 418 ~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~--~~~~~~~~~~~~~ 493 (579)
+|||++........ .....++..|+|||++.+..++.++|||||||++|||++|+.||+.... .......+|....
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 99999986643332 2234478899999999988999999999999999999999999963211 1122333444332
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVR 547 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 547 (579)
.. ...+....+..+...++...+..+.+++.+||+.||++|||+.+|++.|+.
T Consensus 256 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 LK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TS-SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hh-chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 22 233445566666777788889999999999999999999999999999964
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.2e-45 Score=371.55 Aligned_cols=267 Identities=29% Similarity=0.446 Sum_probs=212.0
Q ss_pred HHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 266 LQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 266 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
+.+..++|++.+.||+|+||.||+|.. .++.||||++..........+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 334456899999999999999999987 5889999999877766666788999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLS--VVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 111 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 9999999999999996321 112489999999999999999999976 7 999999999999999999999999998
Q ss_pred ccCCCCCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 424 SNMPNADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 424 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
+....... .....++..|+|||++.+..++.++|||||||++|||++|+.||......... ..
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~----------------~~ 250 (309)
T 3p86_A 187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV----------------AA 250 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----------------HH
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HH
Confidence 75443221 23456788999999999999999999999999999999999999764432111 11
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
..........+...+..+.+++.+||+.||++|||+.++++.|+.+++...
T Consensus 251 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 251 VGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 101111223445566789999999999999999999999999999986543
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.7e-45 Score=366.41 Aligned_cols=261 Identities=24% Similarity=0.410 Sum_probs=213.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|.+.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 347888999999999999999875 6899999998543 3556788999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 87 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 87 EYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp ECCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999973 345689999999999999999999976 999999999999999999999999999976543
Q ss_pred CCcc---------------cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcccc
Q 008055 429 ADEA---------------LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 429 ~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
.... ....+++.|+|||++.+..++.++||||||+++|||++|..||..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------- 232 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------- 232 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS--------
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH--------
Confidence 3221 13457889999999999999999999999999999999999986533211100
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
... .....+ ...+..++..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 233 ~~~---~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 233 GLN---VRGFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp SBC---HHHHHH----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhh---hhcccc----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 000 001111 11233445678999999999999999999999999999886543
No 24
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.4e-45 Score=368.87 Aligned_cols=249 Identities=22% Similarity=0.409 Sum_probs=212.5
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|.+ .+|+.||||++..........+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45799999999999999999987 57999999999776656666788899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999863 34589999999999999999999976 999999999999999999999999999987766
Q ss_pred CCcccccCCCCCccCccccccCCCC-ccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYN-IKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
........+++.|+|||++.+..++ .++|||||||++|||++|+.||......... ..+...
T Consensus 167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----------------~~i~~~- 229 (328)
T 3fe3_A 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR----------------ERVLRG- 229 (328)
T ss_dssp SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHC-
T ss_pred CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHhC-
Confidence 5556667789999999999888875 7899999999999999999999765422111 011101
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
....|...+..+.+++.+||..||++|||+.|+++
T Consensus 230 -~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 230 -KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11233445678899999999999999999999985
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.4e-44 Score=372.84 Aligned_cols=263 Identities=25% Similarity=0.457 Sum_probs=216.0
Q ss_pred hCCccccceeccCCceEEEEEEeC--------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEee
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA--------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSE 340 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 340 (579)
.++|++.+.||+|+||.||+|.+. ++..||||+++... .......+.+|+.+++++ +||||++++++|.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 357889999999999999999752 35679999997653 344567899999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDE------------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANIL 408 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nil 408 (579)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999975332 124588999999999999999999976 9999999999999
Q ss_pred EcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhh
Q 008055 409 LDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQ 484 (579)
Q Consensus 409 l~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~ 484 (579)
++.++.+||+|||+++........ ....++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~-- 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 999999999999999866443321 22334568999999999999999999999999999999 999997643211
Q ss_pred hhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 485 SLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
+...+........+..++..+.+++.+||+.||++|||+.|+++.|+.++....
T Consensus 314 ---------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 314 ---------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp ---------------HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111111122233455667789999999999999999999999999999986543
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1e-44 Score=367.51 Aligned_cols=260 Identities=25% Similarity=0.443 Sum_probs=213.5
Q ss_pred hCCccccceeccCCceEEEEEEeC----CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA----DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
.++|++.+.||+|+||.||+|.+. .+..||||+++... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 457899999999999999999874 35569999997543 3455678999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 127 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999962 345689999999999999999999976 999999999999999999999999999987
Q ss_pred CCCCCcc----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 426 MPNADEA----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 426 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
....... ....++..|+|||++.+..++.++|||||||++|||++ |..||....... +
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----------------~ 263 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-----------------V 263 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----------------H
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-----------------H
Confidence 6443221 11233557999999998999999999999999999999 999996643221 1
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
...+........+..++..+.+++.+||+.||++|||+.+|++.|+.+++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 264 ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 11111122223445667889999999999999999999999999999986544
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-44 Score=366.28 Aligned_cols=274 Identities=24% Similarity=0.356 Sum_probs=209.6
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC----eEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG----QHL 345 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~ 345 (579)
.++|++.+.||+|+||.||+|.+. ++.||||++.... .....+..|+..+++++||||+++++++.+.. ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 457999999999999999999876 7899999996432 33445566888899999999999999998744 479
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEEcCCCCCCEEEcCCCceEEe
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEV-------CSLSVVHKNIKSANILLDNELNPQLS 418 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------~~~~iiH~Dlkp~Nill~~~~~~kl~ 418 (579)
+||||+++|+|.++++. ..+++..++.++.|++.||+|||+. ++.+|+||||||+|||++.++.+||+
T Consensus 99 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 99999999999999963 3489999999999999999999942 11289999999999999999999999
Q ss_pred cccccccCCCCCc---ccccCCCCCccCcccccc-----CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhc
Q 008055 419 DCGLASNMPNADE---ALNNDAGSGYGAPEVAMS-----GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWA 490 (579)
Q Consensus 419 Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~ 490 (579)
|||+++....... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||...............
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999976544332 223457889999999976 35677899999999999999999999764432211111111
Q ss_pred cccccChhHHhh-hcCccccCCCC-----hhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 491 TPQLHDIDALAK-MVDPALKGLYP-----VKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 491 ~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
. .......+.. ..........+ ...+..+.+++.+||+.||++|||+.++++.|+++.+...
T Consensus 254 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~~ 321 (322)
T 3soc_A 254 G-QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTN 321 (322)
T ss_dssp C-SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred c-cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 1111111211 12222222222 2456779999999999999999999999999999987543
No 28
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-44 Score=373.05 Aligned_cols=261 Identities=25% Similarity=0.460 Sum_probs=206.7
Q ss_pred hCCccccceeccCCceEEEEEEeC----CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA----DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
..+|++.+.||+|+||.||+|.+. ++..||||+++... .....+.|.+|+.++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 347889999999999999999765 57789999997643 3455678999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.++++. ....+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999962 345689999999999999999999976 999999999999999999999999999976
Q ss_pred CCCCCccc----ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 426 MPNADEAL----NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 426 ~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
........ ...++..|+|||++....++.++|||||||++|||++ |+.||...... .+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----------------~~ 259 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----------------DV 259 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----------------HH
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----------------HH
Confidence 64432211 1223457999999999999999999999999999998 99999654321 11
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
...+........+..++..+.+++.+||+.||++||++.+|++.|+.+++....
T Consensus 260 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~ 313 (373)
T 2qol_A 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS 313 (373)
T ss_dssp HHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGG
T ss_pred HHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCccc
Confidence 111222223333456678899999999999999999999999999999976543
No 29
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.1e-45 Score=378.10 Aligned_cols=259 Identities=24% Similarity=0.444 Sum_probs=214.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|.+.+.||+|+||.||+|.+. +++.||||+++... .......|.+|+.+++.++||||+++++++.+.+..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 457888999999999999999886 78999999997542 3444567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 192 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 192 ELVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp ECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999963 234588999999999999999999976 999999999999999999999999999976543
Q ss_pred CCcccc---cCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 429 ADEALN---NDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 429 ~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
...... ..++..|+|||++....++.++|||||||++|||++ |..||....... ....+
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-----------------~~~~~ 328 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-----------------TREFV 328 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-----------------HHHHH
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHH
Confidence 221111 112457999999998899999999999999999999 999997643221 11112
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
....+...+..++..+.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 222223345566788999999999999999999999999999988654
No 30
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-44 Score=355.18 Aligned_cols=256 Identities=25% Similarity=0.472 Sum_probs=213.6
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|++.+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 3478899999999999999999988999999999765433 4678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999962 345689999999999999999999976 9999999999999999999999999999765443
Q ss_pred Cc--ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 430 DE--ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 430 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.. .....++..|+|||++....++.++||||||+++|+|++ |+.||........ ... +..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~----------------~~~-~~~ 222 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----------------VED-IST 222 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------HHH-HHT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH----------------HHH-Hhc
Confidence 21 122334557999999998999999999999999999999 9999976432211 111 111
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
......+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 223 GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 122223444567899999999999999999999999999998854
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.4e-44 Score=357.45 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=206.7
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 35799999999999999999975 5789999999865432 23567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 97 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp ECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999999863 3588999999999999999999976 999999999999999999999999999876654
Q ss_pred CCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 ADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
... .....+++.|+|||++.+..++.++|||||||++|||++|+.||........... +... ..
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-------------~~~~--~~ 233 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-------------IATN--GT 233 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-------------HHHH--CS
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------------HHhC--CC
Confidence 332 2345678899999999999999999999999999999999999976433211100 0000 00
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.....+...+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111224455678999999999999999999999985
No 32
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-44 Score=370.29 Aligned_cols=264 Identities=26% Similarity=0.444 Sum_probs=217.4
Q ss_pred hCCccccceeccCCceEEEEEEeC--------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEee
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA--------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSE 340 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 340 (579)
.++|.+.+.||+|+||.||+|... .+..||||++.... .......+.+|+++++++ +||||+++++++.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 457889999999999999999752 24579999997653 345567889999999999 99999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDE------------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANIL 408 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nil 408 (579)
.+..++||||+++|+|.+++..... ....+++..++.|+.|++.||+|||+. +|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999975432 124689999999999999999999976 9999999999999
Q ss_pred EcCCCceEEecccccccCCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhh
Q 008055 409 LDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQ 484 (579)
Q Consensus 409 l~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~ 484 (579)
++.++.+||+|||+++....... .....++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--- 300 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 300 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 99999999999999986644322 222334568999999999999999999999999999999 99999764322
Q ss_pred hhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 485 SLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
.+.+.+........+..++.++.+++.+||+.||++|||+.+|++.|++++.....
T Consensus 301 --------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 301 --------------ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp --------------HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred --------------HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 11111112222333455667899999999999999999999999999999976554
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.9e-44 Score=355.12 Aligned_cols=257 Identities=21% Similarity=0.418 Sum_probs=212.1
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|++.+.||+|+||.||++.+.++..||+|++...... .+.+.+|++++..++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 4578899999999999999999998999999999765433 4678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 100 YMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCTTCBHHHHHHC---GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred ccCCCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999963 234689999999999999999999976 9999999999999999999999999999765443
Q ss_pred Ccc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 430 DEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 430 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
... ....++..|+|||++....++.++||||||+++|||++ |+.||........ ...+..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-----------------~~~~~~ 236 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-----------------AEHIAQ 236 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----------------HHHHHT
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-----------------HHHHhc
Confidence 211 12334567999999998899999999999999999998 9999976443211 111111
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
......+...+..+.+++.+||+.||++|||+.++++.|++++.++
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 237 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1222334445678999999999999999999999999999998765
No 34
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-44 Score=360.95 Aligned_cols=273 Identities=23% Similarity=0.368 Sum_probs=211.4
Q ss_pred hCCccccceeccCCceEEEEEEe-----CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee--CC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-----ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE--YG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 342 (579)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 45789999999999999999974 368899999997543 4556788999999999999999999999854 45
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 689999999999999999632 34589999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcc----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChh
Q 008055 423 ASNMPNADEA----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDID 498 (579)
Q Consensus 423 ~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 498 (579)
+......... ....++..|+|||++.+..++.++||||||+++|||++|..||................... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~ 239 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM-IVF 239 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHH-HHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccch-hHH
Confidence 9866443221 12234456999999999999999999999999999999999986532211111100000000 001
Q ss_pred HHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 499 ALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
.+...+........+..++.++.+++.+||+.||++|||+.++++.|+++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 240 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11222222333344667778999999999999999999999999999999864
No 35
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.6e-43 Score=352.38 Aligned_cols=282 Identities=32% Similarity=0.511 Sum_probs=227.3
Q ss_pred ccccCHHHHHHHhCCcccc------ceeccCCceEEEEEEeCCCcEEEEEEeCCCC--CCchhHHHHHHHHHHHhhcCCC
Q 008055 258 VTSYSIADLQMATGSFNVE------NLLGEGTFGRVYRAQFADGKVLAVKKIDSSA--LPSEMCDDFIEMVSNISQLHHP 329 (579)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~ 329 (579)
...+++.++..++..|... +.||+|+||.||+|.. +++.||+|++.... ......+.+.+|+.+++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3578899999999999877 8999999999999986 58899999987543 2234567899999999999999
Q ss_pred CccceeeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE
Q 008055 330 NIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 409 (579)
Q Consensus 330 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill 409 (579)
||+++++++.+.+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999986432 245689999999999999999999976 99999999999999
Q ss_pred cCCCceEEecccccccCCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh-hhh
Q 008055 410 DNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL-EQS 485 (579)
Q Consensus 410 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~-~~~ 485 (579)
+.++.+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++|..||....... ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 9999999999999876543222 223456789999998764 58999999999999999999999997643211 111
Q ss_pred hhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 486 LVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
+..... .....+...++..+ ...+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 246 ~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIE---DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHH---TTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhh---hhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 111100 01112233334333 2346677889999999999999999999999999999875
No 36
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-44 Score=369.97 Aligned_cols=267 Identities=23% Similarity=0.357 Sum_probs=216.0
Q ss_pred hCCccccceeccCCceEEEEEEeC------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
.++|++.+.||+|+||.||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 357889999999999999999853 46789999996433 34456678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---ceEE
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDE---DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL---NPQL 417 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~---~~kl 417 (579)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999975432 234689999999999999999999976 999999999999999555 5999
Q ss_pred ecccccccCCCC---CcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcccc
Q 008055 418 SDCGLASNMPNA---DEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 418 ~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
+|||+++..... .......++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~----------- 294 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------- 294 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----------
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------
Confidence 999998643221 12223445778999999999999999999999999999998 999997643221
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccccc
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKR 557 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~~~ 557 (579)
+...+........+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.......
T Consensus 295 ------~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~~~~ 352 (367)
T 3l9p_A 295 ------VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 352 (367)
T ss_dssp ------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHHTC
T ss_pred ------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhhccC
Confidence 1111111122233455667899999999999999999999999999999887665433
No 37
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.8e-43 Score=362.61 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=208.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCc----hhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPS----EMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
.+.|++.+.||+|+||.||+|... +|+.||+|++....... ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457999999999999999999875 68999999997654321 2357789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----ceEEecc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL----NPQLSDC 420 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~----~~kl~Df 420 (579)
++||||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999995 345689999999999999999999976 999999999999998877 7999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
|++.............+|+.|+|||++.+..++.++|||||||++|+|++|..||........ +
T Consensus 164 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~----------------~ 227 (361)
T 2yab_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----------------L 227 (361)
T ss_dssp SSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----------------H
T ss_pred CCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH----------------H
Confidence 999877665555566788999999999998999999999999999999999999976432211 0
Q ss_pred hhhcCccc--cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 501 AKMVDPAL--KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 501 ~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+..... ...+....+..+.+|+.+||..||++|||+.|+++
T Consensus 228 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 228 ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11100000 00001233467899999999999999999999984
No 38
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.4e-44 Score=369.98 Aligned_cols=273 Identities=24% Similarity=0.441 Sum_probs=219.3
Q ss_pred ccCHHHHHHHhCCccccceeccCCceEEEEEEe------CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCcc
Q 008055 260 SYSIADLQMATGSFNVENLLGEGTFGRVYRAQF------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIM 332 (579)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv 332 (579)
.+...++++..++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|++++.++ +||||+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCccee
Confidence 445666777788999999999999999999973 246899999997543 344467799999999999 899999
Q ss_pred ceeeEEeeCC-eEEEEEEecCCCChhhhhcccCCC---------------------------------------------
Q 008055 333 ELVGYCSEYG-QHLLVYEFRKNGSLHDFLHLSDED--------------------------------------------- 366 (579)
Q Consensus 333 ~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------- 366 (579)
++++++.+.+ ..++||||+++|+|.++++.....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 9999998755 489999999999999999754321
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 367 -----------------NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 367 -----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 12288999999999999999999976 9999999999999999999999999999765433
Q ss_pred Cc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 430 DE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 430 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.. .....++..|+|||++.+..++.++|||||||++|||++ |..||....... .+...+.
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----------------~~~~~~~ 310 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----------------EFCRRLK 310 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----------------HHHHHHH
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----------------HHHHHHH
Confidence 22 122345668999999999999999999999999999998 999997643211 1111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
.......+...+.++.+++.+||+.||++|||+.++++.|+++++..
T Consensus 311 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 311 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 11122334455678999999999999999999999999999998653
No 39
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.4e-44 Score=352.57 Aligned_cols=255 Identities=23% Similarity=0.415 Sum_probs=211.8
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|++.+.||+|+||.||+|..+++..||+|++...... .+.+.+|+..+.+++||||+++++++.+.+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 4578999999999999999999998889999999765432 4678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 99999999999632 34589999999999999999999976 9999999999999999999999999999866543
Q ss_pred Ccc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 430 DEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 430 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
... ....++..|+|||++.+..++.++||||||+++|||++ |+.||......... ... ..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~----------------~~~-~~ 220 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV----------------LKV-SQ 220 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----------------HHH-HT
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH----------------HHH-Hc
Confidence 322 12233457999999998899999999999999999999 99999764432111 010 11
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQ 550 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 550 (579)
......+...+..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 221 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 221 GHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 11122234455689999999999999999999999999987654
No 40
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-43 Score=353.39 Aligned_cols=262 Identities=25% Similarity=0.421 Sum_probs=208.3
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|.+.+.||+|+||.||+|.+. ..+|+|+++.........+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 457899999999999999999864 46899999876666666788999999999999999999999875 456899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++|+|.+++. .....+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHH---TSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999986 2355789999999999999999999976 9999999999999999999999999998754321
Q ss_pred ---CcccccCCCCCccCccccc---cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhh
Q 008055 430 ---DEALNNDAGSGYGAPEVAM---SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKM 503 (579)
Q Consensus 430 ---~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
.......++..|+|||++. ...++.++|||||||++|||++|+.||............ . ....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--~---------~~~~ 254 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM--V---------GRGY 254 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH--H---------HHTC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHH--H---------hcCC
Confidence 2223346788999999986 566889999999999999999999999764432111000 0 0000
Q ss_pred cCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 504 VDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
..+.+ ......++..+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 255 ~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 255 ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCCCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCcch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 11111 1223455678999999999999999999999999999887543
No 41
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-43 Score=357.75 Aligned_cols=262 Identities=27% Similarity=0.488 Sum_probs=215.5
Q ss_pred hCCccccceeccCCceEEEEEEe------CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45788999999999999999975 245889999997543 34556788999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDE--------------------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIK 403 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlk 403 (579)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999975432 123588999999999999999999976 99999999
Q ss_pred CCCEEEcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCC
Q 008055 404 SANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSR 479 (579)
Q Consensus 404 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~ 479 (579)
|+|||++.++.+||+|||++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999866443322 22334567999999998899999999999999999999 999997643
Q ss_pred chhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 480 PRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
... +...+........+...+..+.+++.+||+.||++|||+.++++.|++++.+.
T Consensus 258 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 258 PER-----------------LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313 (314)
T ss_dssp GGG-----------------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HHH-----------------HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhhc
Confidence 321 11111111122334556678999999999999999999999999999998753
No 42
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.6e-43 Score=363.83 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=209.8
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999775 6899999999877666666788999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---ceEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL---NPQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~~~~ 425 (579)
||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||++..
T Consensus 108 e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHT----TCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999885 245689999999999999999999976 999999999999998654 599999999987
Q ss_pred CCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhhhhccccccChhHHhhhc
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 504 (579)
...........+++.|+|||++.+..++.++|||||||++|+|++|+.||......... .+....
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------- 246 (362)
T 2bdw_A 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA-------------- 246 (362)
T ss_dssp CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--------------
T ss_pred ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--------------
Confidence 76555455567889999999999989999999999999999999999999764322110 000000
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...........+.++.+++.+||+.||++|||+.++++
T Consensus 247 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 247 -YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000111234578999999999999999999999874
No 43
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.3e-43 Score=354.10 Aligned_cols=267 Identities=22% Similarity=0.341 Sum_probs=203.5
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|++.+.||+|+||.||+|...+++.||+|++............+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46799999999999999999999889999999997665555556788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|++ |+|.+++. .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FME-KDLKKVLD---ENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCS-EEHHHHHH---TCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCC-CCHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 997 48888875 2345689999999999999999999976 9999999999999999999999999999876433
Q ss_pred C-cccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhc-cccccC---hhHHhh
Q 008055 430 D-EALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWA-TPQLHD---IDALAK 502 (579)
Q Consensus 430 ~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~-~~~~~~---~~~~~~ 502 (579)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.... .+.... ...+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 2 2334467889999999876 5689999999999999999999999976443211 1111111 110000 000000
Q ss_pred hcCccccC-------CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 503 MVDPALKG-------LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 503 ~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+..... ......+.++.+|+.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 011223467899999999999999999999985
No 44
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.1e-44 Score=351.28 Aligned_cols=253 Identities=21% Similarity=0.383 Sum_probs=211.5
Q ss_pred CCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC--CeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY--GQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|.+. ++.||+|++..........+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46889999999999999999885 88999999988776667778899999999999999999999999876 7889999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLS--VVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||+++|+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999732 233689999999999999999999976 6 999999999999999999999999987543
Q ss_pred CCCCcccccCCCCCccCccccccCCCCc---cchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhh
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNI---KSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKM 503 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
.. ....+++.|+|||++.+..++. ++|||||||++|||++|+.||....... .....
T Consensus 164 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------------~~~~~ 223 (271)
T 3kmu_A 164 QS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----------------IGMKV 223 (271)
T ss_dssp SC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----------------HHHHH
T ss_pred cc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----------------HHHHH
Confidence 22 2345678999999998766554 7999999999999999999997543221 11111
Q ss_pred cCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 504 VDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
.........+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1122233345556778999999999999999999999999999875
No 45
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-43 Score=357.19 Aligned_cols=250 Identities=19% Similarity=0.226 Sum_probs=207.4
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 467999999999999999999765 68899999986432 34567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--CCceEEecccccccC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN--ELNPQLSDCGLASNM 426 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~~~~~ 426 (579)
||+++|+|.+++. .....+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||++...
T Consensus 81 e~~~g~~L~~~l~---~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 81 EFISGLDIFERIN---TSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCCBHHHHHT---SSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EeCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999986 2345689999999999999999999976 9999999999999987 789999999999887
Q ss_pred CCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
..........+++.|+|||++.+..++.++|||||||++|+|++|..||........ +..+...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------------~~~i~~~ 218 (321)
T 1tki_A 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----------------IENIMNA 218 (321)
T ss_dssp CTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHHHHT
T ss_pred CCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH----------------HHHHHcC
Confidence 665555556788899999999988899999999999999999999999976432211 0000000
Q ss_pred cccC--CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKG--LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
.... ......+.++.+++.+||..||++|||+.|+++.
T Consensus 219 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 0001335688999999999999999999999863
No 46
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-44 Score=366.18 Aligned_cols=266 Identities=26% Similarity=0.457 Sum_probs=215.5
Q ss_pred HHHHhCCccccceeccCCceEEEEEEeC------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe
Q 008055 266 LQMATGSFNVENLLGEGTFGRVYRAQFA------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS 339 (579)
Q Consensus 266 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 339 (579)
+....++|++.+.||+|+||.||+|... +++.||+|+++... .......+.+|+.+++.++||||+++++++.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 3445678999999999999999999874 34889999997554 3455678999999999999999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhcccCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 008055 340 EYGQHLLVYEFRKNGSLHDFLHLSDED--------------------NKPLIWNSRVKIALGTARALEYLHEVCSLSVVH 399 (579)
Q Consensus 340 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH 399 (579)
+.+..++||||+++|+|.+++...... ...+++.+++.++.||+.||.|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999999999999999999753221 25789999999999999999999976 9999
Q ss_pred cCCCCCCEEEcCCCceEEecccccccCCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCC
Q 008055 400 KNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPF 475 (579)
Q Consensus 400 ~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~ 475 (579)
|||||+|||++.++.+||+|||++........ .....++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999875533221 123345678999999998899999999999999999999 99999
Q ss_pred CCCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 476 DSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
....... ....+.+ ......+..++..+.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 278 ~~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 278 YGMAHEE----------------VIYYVRD-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTSCHHH----------------HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCChHH----------------HHHHHhC-CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 7543211 1111111 1112234556678999999999999999999999999999887544
No 47
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-43 Score=373.67 Aligned_cols=254 Identities=26% Similarity=0.424 Sum_probs=210.6
Q ss_pred HhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC-eEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG-QHLLV 347 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv 347 (579)
..++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.++++++||||+++++++.+.+ ..++|
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 3467889999999999999999886 7899999997643 3578999999999999999999999987655 79999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.++++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 266 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 9999999999999742 233478999999999999999999976 99999999999999999999999999998553
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
... ....++..|+|||++....++.++|||||||++|||++ |+.||....... +...+..
T Consensus 341 ~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----------------~~~~i~~ 401 (450)
T 1k9a_A 341 STQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------------VVPRVEK 401 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-----------------HHHHHHT
T ss_pred ccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHc
Confidence 321 22345678999999999999999999999999999999 999997543211 1111112
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
..+...+..++..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 402 ~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 402 GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 223344566778999999999999999999999999999998754
No 48
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.8e-44 Score=355.77 Aligned_cols=263 Identities=22% Similarity=0.336 Sum_probs=209.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+..+++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999764 689999999865433 345567889999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 90 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999963 34689999999999999999999976 99999999999999999999999999997664
Q ss_pred CCCc--ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 428 NADE--ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 428 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.... .....+++.|+|||++.+..++.++||||||+++|||++|+.||......... . .......
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~-~~~~~~~----------- 229 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-I-KHIQDSV----------- 229 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-H-HHHSSCC-----------
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-H-HHhhccC-----------
Confidence 3322 22345788999999999999999999999999999999999999764422110 0 0000000
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCC-ChHHHHHHHHHHHHHc
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRP-PMSEVVQALVRLVQRA 552 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~i~~~~ 552 (579)
+......+...+..+.+++.+||+.||++|| +++++.+.|+.++...
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 0111112334557899999999999999998 8999999988766433
No 49
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=362.23 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=199.5
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|.. .+|+.||||++....... ....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch-HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 56899999999999999999976 578999999997655432 3457889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999999863 34589999999999999999999976 999999999999999999999999999876543
Q ss_pred CCc--ccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 429 ADE--ALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 429 ~~~--~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
... .....+++.|+|||++.+..+ +.++|||||||++|+|++|..||........ ...+..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~----------------~~~i~~ 224 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL----------------YKKIMR 224 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHHHH
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH----------------HHHHHc
Confidence 322 234567889999999988775 8999999999999999999999976432110 001110
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
. ....+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 225 ~--~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 225 G--KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp T--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C--CCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 112344456788999999999999999999999864
No 50
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=359.45 Aligned_cols=268 Identities=23% Similarity=0.425 Sum_probs=200.7
Q ss_pred HHhCCccccceeccCCceEEEEEEeCCC----cEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQFADG----KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
+..++|++.+.||+|+||.||+|..... ..||||++..........+.+.+|+.++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3456899999999999999999976543 279999998766566667889999999999999999999999987665
Q ss_pred E------EEEEEecCCCChhhhhcccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCce
Q 008055 344 H------LLVYEFRKNGSLHDFLHLSD--EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 344 ~------~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
. ++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999986433 2233689999999999999999999976 99999999999999999999
Q ss_pred EEecccccccCCCCCccc---ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcc
Q 008055 416 QLSDCGLASNMPNADEAL---NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 491 (579)
||+|||++.......... ...++..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-------- 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-------- 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--------
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--------
Confidence 999999997654433221 2234557999999999999999999999999999999 9999976443211
Q ss_pred ccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 492 PQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
...+. .......+...+..+.+++.+||+.||++|||+.++++.|+++++.....
T Consensus 249 --------~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 249 --------YNYLI-GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp --------HHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred --------HHHHh-cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 11111 11112234456678999999999999999999999999999999866553
No 51
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.2e-43 Score=360.62 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=206.2
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|+.+ +|+.||+|++++... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 47899999999999999999875 689999999965321 1234567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999863 34688999999999999999999976 999999999999999999999999999976433
Q ss_pred -CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 -ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
........+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----------------~~~i~~~- 220 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----------------FELILME- 220 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHHHHC-
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH----------------HHHHHcC-
Confidence 2334455678899999999999999999999999999999999999975432110 0011111
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCC-----ChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRP-----PMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 543 (579)
...++...+.++.+++.+||+.||++|| ++.|+++
T Consensus 221 -~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 221 -EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1123445667899999999999999999 8888875
No 52
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=356.23 Aligned_cols=246 Identities=24% Similarity=0.313 Sum_probs=196.6
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||+||+|... +++.||||++............+..|+..+..+ +||||++++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 47999999999999999999876 799999999876655545555566666666555 9999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 77999988632 45689999999999999999999976 999999999999999999999999999987765
Q ss_pred CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
........+|..|+|||++.+ .++.++|||||||++|||++|..|+..... ...+.....
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------------------~~~~~~~~~ 269 (311)
T 3p1a_A 210 AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------------------WQQLRQGYL 269 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------------------HHHHTTTCC
T ss_pred CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------------------HHHHhccCC
Confidence 555555667889999998875 799999999999999999999766643211 011111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...++...+..+.+++.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11112234568999999999999999999999985
No 53
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.8e-43 Score=348.75 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=199.4
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCC--chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALP--SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|.+. ++.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357899999999999999999875 889999998754322 23457789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--------CCceEEec
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN--------ELNPQLSD 419 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~--------~~~~kl~D 419 (579)
|||+++++|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+|||++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999985 346899999999999999999999872122999999999999986 67899999
Q ss_pred ccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 420 CGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 420 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
||++....... .....++..|+|||++.+..++.++||||||+++|+|++|+.||....... .
T Consensus 160 fg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------------~ 222 (271)
T 3dtc_A 160 FGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA----------------V 222 (271)
T ss_dssp CCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH----------------H
T ss_pred CCccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----------------H
Confidence 99997654332 224567889999999999999999999999999999999999997643221 1
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHH
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRL 548 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 548 (579)
.............+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 223 AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1112222223334556677899999999999999999999999999753
No 54
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=353.08 Aligned_cols=258 Identities=28% Similarity=0.470 Sum_probs=202.2
Q ss_pred CCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEEe
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEF 350 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 350 (579)
++|++.+.||+|+||.||+|.+. ++.||+|++... ...+.+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 46888999999999999999875 788999998643 345788999999999999999999998874 48999999
Q ss_pred cCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-eEEecccccccCCCC
Q 008055 351 RKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN-PQLSDCGLASNMPNA 429 (579)
Q Consensus 351 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~ 429 (579)
+++|+|.++++... ....+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 99999999997322 1234788999999999999999999742359999999999999998887 799999998755332
Q ss_pred CcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcccc
Q 008055 430 DEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALK 509 (579)
Q Consensus 430 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (579)
.....++..|+|||++.+..++.++||||||+++|||++|+.||......... +.........
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---------------~~~~~~~~~~ 222 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---------------IMWAVHNGTR 222 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---------------HHHHHHTTCC
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---------------HHHHHhcCCC
Confidence 22345788999999999999999999999999999999999999753221110 0000001111
Q ss_pred CCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 510 GLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 510 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
...+...+..+.+++.+||+.||++|||+.++++.|+.+.+...
T Consensus 223 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 22334556789999999999999999999999999999876544
No 55
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-43 Score=359.91 Aligned_cols=256 Identities=20% Similarity=0.415 Sum_probs=204.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCc----EEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGK----VLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
++|++.+.||+|+||.||+|.+. +++ .||+|.+.... .....+.+.+|+.++++++||||++++++|.+. ..+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 46889999999999999999864 444 35888876433 234467899999999999999999999999875 478
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+|+||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999973 345689999999999999999999976 999999999999999999999999999976
Q ss_pred CCCCCccc---ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 426 MPNADEAL---NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 426 ~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
........ ...++..|+|||++.+..++.++|||||||++|||++ |+.||....... +.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~~ 229 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------IS 229 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------------HH
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----------------HH
Confidence 54433222 2234568999999999999999999999999999999 999997644321 11
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
..+........+..++..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 12222222334555677899999999999999999999999999998753
No 56
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=355.95 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=207.1
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCc----hhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPS----EMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
+.|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 36889999999999999999875 68999999997654321 23577899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----ceEEeccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL----NPQLSDCG 421 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg 421 (579)
+||||+++|+|.+++. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999985 245689999999999999999999976 999999999999999887 79999999
Q ss_pred ccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 422 LASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
++.............+++.|+|||++....++.++|||||||++|+|++|..||........... +.
T Consensus 164 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-------------~~ 230 (326)
T 2y0a_A 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-------------VS 230 (326)
T ss_dssp TCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-------------HH
T ss_pred CCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-------------HH
Confidence 99877655555556788999999999989999999999999999999999999976432211100 00
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. .............+..+.+++.+||+.||++|||+.++++
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 231 A-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp H-TCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred h-cCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0000000001233467899999999999999999999986
No 57
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2e-43 Score=350.46 Aligned_cols=259 Identities=23% Similarity=0.404 Sum_probs=202.4
Q ss_pred hCCccccceeccCCceEEEEEEeCC----CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFAD----GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
.++|++.+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+..++.++||||+++++++. .+..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4578999999999999999997643 4579999987543 3445678899999999999999999999985 56789
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus 92 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999963 244689999999999999999999976 999999999999999999999999999976
Q ss_pred CCCCCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 426 MPNADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 426 ~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
....... ....++..|+|||++....++.++||||||+++|||++ |..||........ ...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~----------------~~~ 229 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV----------------IGR 229 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH----------------HHH
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH----------------HHH
Confidence 6443222 12234568999999998899999999999999999997 9999976432211 111
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
+.. ......+..++..+.+++.+||+.||++|||+.++++.|++++++..
T Consensus 230 i~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 230 IEN-GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp HHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111 11122345567789999999999999999999999999999987653
No 58
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.3e-43 Score=348.40 Aligned_cols=254 Identities=28% Similarity=0.471 Sum_probs=206.9
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhH-----HHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMC-----DDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
.++|++.+.||+|+||.||+|.. .+++.||+|++.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35799999999999999999977 478999999997654332222 67899999999999999999999997655
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCEEEcCCCc-----eE
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLS--VVHKNIKSANILLDNELN-----PQ 416 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--iiH~Dlkp~Nill~~~~~-----~k 416 (579)
++||||+++|+|.+++. .....+++..++.++.|++.||+|||++ + |+||||||+|||++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHh---cccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999999886 3345789999999999999999999976 7 999999999999988776 99
Q ss_pred EecccccccCCCCCcccccCCCCCccCccccc--cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 417 LSDCGLASNMPNADEALNNDAGSGYGAPEVAM--SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 417 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
|+|||+++.... ......++..|+|||++. ...++.++|||||||++|||++|+.||.........
T Consensus 170 l~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---------- 237 (287)
T 4f0f_A 170 VADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---------- 237 (287)
T ss_dssp ECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH----------
T ss_pred eCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH----------
Confidence 999999975433 333456788999999984 455789999999999999999999999754322111
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVR 547 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 547 (579)
..............+..++..+.+++.+||+.||++|||+.++++.|++
T Consensus 238 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 238 ----FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp ----HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----HHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1111122223334455667889999999999999999999999999975
No 59
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-42 Score=351.65 Aligned_cols=259 Identities=23% Similarity=0.330 Sum_probs=210.3
Q ss_pred ccCHHHHHHHhCC----------ccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCC
Q 008055 260 SYSIADLQMATGS----------FNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHH 328 (579)
Q Consensus 260 ~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h 328 (579)
.++.+++..+++. |+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCC
Confidence 3455555555443 677789999999999999876 79999999997544 2345778899999999999
Q ss_pred CCccceeeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 008055 329 PNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANIL 408 (579)
Q Consensus 329 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nil 408 (579)
|||+++++++...+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999985 34689999999999999999999976 9999999999999
Q ss_pred EcCCCceEEecccccccCCCCC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhh
Q 008055 409 LDNELNPQLSDCGLASNMPNAD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLV 487 (579)
Q Consensus 409 l~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~ 487 (579)
++.++.+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~--- 250 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM--- 250 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---
T ss_pred ECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---
Confidence 9999999999999987665432 233456788999999999999999999999999999999999999754321110
Q ss_pred hhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 488 RWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+.....+.. ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 251 ----------~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 ----------KRLRDSPPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ----------HHHHHSSCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----------HHHhcCCCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111111111 112344568999999999999999999999986
No 60
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.8e-43 Score=354.86 Aligned_cols=264 Identities=25% Similarity=0.447 Sum_probs=215.5
Q ss_pred hCCccccceeccCCceEEEEEEe------CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 342 (579)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 45789999999999999999975 3568999999975542 34467889999999999 9999999999999999
Q ss_pred eEEEEEEecCCCChhhhhcccCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDE--------------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANIL 408 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nil 408 (579)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999974322 123589999999999999999999976 9999999999999
Q ss_pred EcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhh
Q 008055 409 LDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQ 484 (579)
Q Consensus 409 l~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~ 484 (579)
++.++.+||+|||++......... ....++..|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 255 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 255 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence 999999999999999866543321 12234567999999999999999999999999999999 999997643211
Q ss_pred hhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 485 SLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
.....+........+...+..+.+++.+||+.||++|||+.++++.|++++.+..
T Consensus 256 --------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 256 --------------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp --------------HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred --------------HHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1111111112222344556789999999999999999999999999999987654
No 61
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3e-43 Score=356.22 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=201.9
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 57999999999999999999776 7899999999654432 234668899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++|+|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999985 345689999999999999999999976 9999999999999999999999999999765322
Q ss_pred C---cccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 430 D---EALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 430 ~---~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
. ......++..|+|||++.+..+ +.++|||||||++|||++|+.||....... .....|..
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~-------------- 223 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE-------------- 223 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHHHT--------------
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHHhc--------------
Confidence 2 1224567889999999987775 789999999999999999999997543211 11111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...........+..+.+|+.+||+.||++|||+.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111111123445688999999999999999999999753
No 62
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.2e-43 Score=351.50 Aligned_cols=253 Identities=24% Similarity=0.372 Sum_probs=198.6
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhh--cCCCCccceeeEEee----CCe
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ--LHHPNIMELVGYCSE----YGQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~ 343 (579)
.++|++.+.||+|+||.||+|.+ +++.||||++... ....+..|.+++.. ++||||+++++++.. ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 45799999999999999999987 6899999998643 34556666666665 799999999998654 356
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCEEEcCCCce
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLH--------EVCSLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
.++||||+++|+|.++++ ...+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 899999999999999995 346899999999999999999999 55 99999999999999999999
Q ss_pred EEecccccccCCCCCcc-----cccCCCCCccCccccccC------CCCccchHHhHHHHHHHHHhC----------CCC
Q 008055 416 QLSDCGLASNMPNADEA-----LNNDAGSGYGAPEVAMSG------QYNIKSDVYSFGVVMLELLTG----------RKP 474 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~elltg----------~~p 474 (579)
||+|||++......... ....++..|+|||++.+. .++.++|||||||++|||++| ..|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99999998654333221 223678899999999876 556799999999999999999 777
Q ss_pred CCCCCchhhhhhhhhccccccChhHHhhhc-CccccCC-----CChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHH
Q 008055 475 FDSSRPRLEQSLVRWATPQLHDIDALAKMV-DPALKGL-----YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRL 548 (579)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 548 (579)
|....... .....+.... ....... ++...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 233 f~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPND------------PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSS------------CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCC------------cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 75432210 0011111111 1111111 2234678899999999999999999999999999875
No 63
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.2e-43 Score=350.26 Aligned_cols=266 Identities=23% Similarity=0.347 Sum_probs=203.9
Q ss_pred CCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEEe
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEF 350 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 350 (579)
++|++.+.||+|+||.||+|...+++.||+|++............+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 47899999999999999999988899999999976654444457888999999999999999999999999999999999
Q ss_pred cCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCCC
Q 008055 351 RKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD 430 (579)
Q Consensus 351 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 430 (579)
+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 975 99988863 335689999999999999999999976 99999999999999999999999999987654322
Q ss_pred -cccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhh-ccccccChhHHhh--hc
Q 008055 431 -EALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRW-ATPQLHDIDALAK--MV 504 (579)
Q Consensus 431 -~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~--~~ 504 (579)
......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ..+... ..+.......... ..
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 22334568899999999764 589999999999999999999999976543211 111111 1110000000000 00
Q ss_pred Ccccc-------CCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 505 DPALK-------GLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 505 ~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
++... ..+....+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11110 1112335678899999999999999999999875
No 64
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.6e-43 Score=355.69 Aligned_cols=264 Identities=25% Similarity=0.445 Sum_probs=214.3
Q ss_pred hCCccccceeccCCceEEEEEEeC--------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEee
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA--------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSE 340 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 340 (579)
.++|++.+.||+|+||.||+|... ++..||+|++.... .......+.+|+.+++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 457899999999999999999763 46789999997543 344567889999999999 99999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDED------------NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANIL 408 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nil 408 (579)
.+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 99999999999999999999743321 23488999999999999999999976 9999999999999
Q ss_pred EcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhh
Q 008055 409 LDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQ 484 (579)
Q Consensus 409 l~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~ 484 (579)
++.++.+||+|||++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 268 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL- 268 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-
Confidence 999999999999999866543321 22334567999999998889999999999999999999 9999976432211
Q ss_pred hhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 485 SLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
...+........+..++..+.+++.+||+.||++|||+.++++.|+.++.....
T Consensus 269 ----------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 269 ----------------FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp ----------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ----------------HHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 111111112223445667899999999999999999999999999999976554
No 65
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=350.55 Aligned_cols=272 Identities=19% Similarity=0.273 Sum_probs=211.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC--eEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG--QHLLV 347 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 347 (579)
++|.+.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 47899999999999999999876 589999999975432 233577889999999999999999999987655 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE----cCCCceEEeccccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL----DNELNPQLSDCGLA 423 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg~~ 423 (579)
|||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999997432 223489999999999999999999976 99999999999999 77888999999999
Q ss_pred ccCCCCCcccccCCCCCccCccccc--------cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh--hhhhhhh---c
Q 008055 424 SNMPNADEALNNDAGSGYGAPEVAM--------SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL--EQSLVRW---A 490 (579)
Q Consensus 424 ~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~--~~~~~~~---~ 490 (579)
+............++..|+|||++. ...++.++|||||||++|||++|+.||....... ...+... .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 8876665555667888999999986 5678999999999999999999999996433211 1111110 0
Q ss_pred cccc-cChhHH----hhhc-CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q 008055 491 TPQL-HDIDAL----AKMV-DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVR 547 (579)
Q Consensus 491 ~~~~-~~~~~~----~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 547 (579)
.+.. ...... ..+. +.......+...+..+.+++.+||+.||++|||++|+++...+
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 0000 000000 0000 0011123456778899999999999999999999999987754
No 66
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6e-43 Score=368.05 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=207.0
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|.. .+|+.+|+|++..........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45799999999999999999976 47899999999877665566778899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc---CCCceEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD---NELNPQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~~~~ 425 (579)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||++..
T Consensus 90 E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 90 DLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp CCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 99999999999863 34689999999999999999999976 999999999999998 467899999999977
Q ss_pred CCCCCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 426 MPNADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 426 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
...... .....+++.|+|||++.+..++.++|||||||++|+|++|..||........... +...
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~-------------i~~~- 228 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ-------------IKAG- 228 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-------------HHHT-
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHH-------------HHhC-
Confidence 654332 2345678899999999999999999999999999999999999976433211100 0000
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
............+.++.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 229 AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000011111234578999999999999999999999985
No 67
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1e-43 Score=376.56 Aligned_cols=256 Identities=23% Similarity=0.436 Sum_probs=211.7
Q ss_pred HHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
+..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+++.++||||+++++++. .+..++|
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 3456788999999999999999999889999999997644 23678999999999999999999999986 5678999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.++++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 261 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp ECCCTTCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 9999999999999632 123578899999999999999999976 99999999999999999999999999998764
Q ss_pred CCCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 428 NADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 428 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
..... ....++..|+|||++....++.++|||||||++|||+| |+.||....... +...+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-----------------~~~~i 398 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------------VIRAL 398 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----------------HHHHH
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHH
Confidence 32211 12234567999999998999999999999999999999 999997643211 11111
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
....+...+..++..+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 399 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 112222345567789999999999999999999999999998765
No 68
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-43 Score=358.83 Aligned_cols=251 Identities=21% Similarity=0.344 Sum_probs=206.7
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCC--CCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHH--PNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 347 (579)
..+|++.+.||+|+||.||++...+++.||||++..........+.+.+|+.++..++| |||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45799999999999999999998899999999998776666667889999999999977 9999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|| +.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||++....
T Consensus 88 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 568899999963 35688999999999999999999976 999999999999997 5789999999998664
Q ss_pred CCCc---ccccCCCCCccCcccccc-----------CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcccc
Q 008055 428 NADE---ALNNDAGSGYGAPEVAMS-----------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 428 ~~~~---~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
.... .....+++.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------------ 226 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------------ 226 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------------
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH------------
Confidence 4332 223467889999999865 67899999999999999999999999653221
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...+...+++.....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ---ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 123333444444445555566789999999999999999999999864
No 69
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-43 Score=360.17 Aligned_cols=265 Identities=25% Similarity=0.413 Sum_probs=209.8
Q ss_pred HhCCccccceeccCCceEEEEEEe------CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeC
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQF------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEY 341 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 341 (579)
..++|++.+.||+|+||.||+|.. .++..||+|++.... .....+.+.+|+.++.++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 346799999999999999999986 245689999997543 234457889999999999 999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhcccCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDED-------------------NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNI 402 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dl 402 (579)
+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 9999999999999999999743221 13478999999999999999999976 9999999
Q ss_pred CCCCEEEcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCC
Q 008055 403 KSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSS 478 (579)
Q Consensus 403 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~ 478 (579)
||+|||++.++.+||+|||++......... ....++..|+|||++.+..++.++|||||||++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999765432221 12334568999999999999999999999999999998 99999764
Q ss_pred CchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 479 RPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
... ..+...+........+...+..+.+++.+||+.||++|||+.++++.|+.++....
T Consensus 279 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 279 PVD----------------ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCS----------------HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CcH----------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 321 11111111222233345566789999999999999999999999999999886544
No 70
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.5e-43 Score=361.06 Aligned_cols=255 Identities=23% Similarity=0.328 Sum_probs=205.1
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCC---CCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSA---LPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
+.|++.+.||+|+||.||+|... +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46999999999999999999765 68999999985321 112235778999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---eEEeccccc
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN---PQLSDCGLA 423 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~~ 423 (579)
||||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999988865444455689999999999999999999976 9999999999999987654 999999999
Q ss_pred ccCCCCCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 424 SNMPNADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 424 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
........ .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||..........+..... ..
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~---~~------ 251 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY---KM------ 251 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCC---CC------
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCC---CC------
Confidence 87655433 234567889999999999999999999999999999999999997643211111111000 00
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+.. ....+..+.+++.+||+.||++|||+.++++
T Consensus 252 --~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 --NPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --Cccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 0123468899999999999999999999984
No 71
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=363.15 Aligned_cols=250 Identities=23% Similarity=0.386 Sum_probs=206.7
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCC-CCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSA-LPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||++... +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46899999999999999999765 58899999986432 12234577889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+.+|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQ----QNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999996 345689999999999999999999976 999999999999999999999999999988766
Q ss_pred CCcccccCCCCCccCcccccc---CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 429 ADEALNNDAGSGYGAPEVAMS---GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
........+|+.|+|||++.. ..++.++|||||||++|||++|+.||..........+.. .+.
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-------------~~~- 233 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH-------------TFE- 233 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-------------HHH-
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-------------HHh-
Confidence 666666788999999999974 458999999999999999999999997543221111110 000
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCC-hHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPP-MSEVV 542 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl 542 (579)
.....++...+..+.+|+.+||+.||++||+ +.+++
T Consensus 234 -~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 234 -TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp -HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred -hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 0112344556678999999999999999998 66655
No 72
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-43 Score=380.09 Aligned_cols=258 Identities=23% Similarity=0.448 Sum_probs=215.4
Q ss_pred HhCCccccceeccCCceEEEEEEeCC-CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFAD-GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
...+|++.+.||+|+||.||+|.+.. +..||||+++.... ..+.|.+|+.++++++||||++++++|.+.+..++|
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 34578899999999999999998764 88999999976542 367899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.++++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 295 ~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 295 TEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999742 345689999999999999999999976 99999999999999999999999999998764
Q ss_pred CCCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 428 NADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 428 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
..... ....++..|+|||++....++.++|||||||++|||++ |..||...... .+.+.+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----------------~~~~~~ 432 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------------QVYELL 432 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----------------GHHHHH
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHH
Confidence 33221 12233457999999999999999999999999999999 99999764321 111122
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
....+...+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 433 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 433 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 22333344566778999999999999999999999999999877643
No 73
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-43 Score=345.03 Aligned_cols=256 Identities=25% Similarity=0.462 Sum_probs=212.7
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 3578899999999999999999988999999999765432 4678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999963 235688999999999999999999976 9999999999999999999999999998765432
Q ss_pred Cc--ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 430 DE--ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 430 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.. .....++..|+|||++....++.++||||||+++|||++ |+.||........ ...+ ..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----------------~~~i-~~ 220 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----------------VEDI-ST 220 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------HHHH-HT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH----------------HHHH-hc
Confidence 21 112334567999999998899999999999999999999 8999976432110 0011 11
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
......+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus 221 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 221 GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111223344567899999999999999999999999999998753
No 74
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.8e-43 Score=348.54 Aligned_cols=250 Identities=22% Similarity=0.347 Sum_probs=197.0
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCc------------------------hhHHHHHHHHHHHh
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPS------------------------EMCDDFIEMVSNIS 324 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~ 324 (579)
.++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 457999999999999999999764 68899999997553211 12356889999999
Q ss_pred hcCCCCccceeeEEee--CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 008055 325 QLHHPNIMELVGYCSE--YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNI 402 (579)
Q Consensus 325 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dl 402 (579)
+++||||+++++++.+ .+..++||||+++|+|.+++. ...+++..++.++.|++.||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 578999999999999988753 34689999999999999999999976 9999999
Q ss_pred CCCCEEEcCCCceEEecccccccCCCCCc-ccccCCCCCccCccccccCC---CCccchHHhHHHHHHHHHhCCCCCCCC
Q 008055 403 KSANILLDNELNPQLSDCGLASNMPNADE-ALNNDAGSGYGAPEVAMSGQ---YNIKSDVYSFGVVMLELLTGRKPFDSS 478 (579)
Q Consensus 403 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGv~l~elltg~~p~~~~ 478 (579)
||+|||++.++.+||+|||++........ .....++..|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999987654332 23456788999999997665 378899999999999999999999754
Q ss_pred CchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 479 RPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...... ..+.............+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 RIMCLH----------------SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SHHHHH----------------HHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cHHHHH----------------HHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 321110 0000001111112234568999999999999999999999874
No 75
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.4e-43 Score=348.84 Aligned_cols=260 Identities=27% Similarity=0.476 Sum_probs=200.5
Q ss_pred HhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
..++|++.+.||+|+||.||+|... ..+|+|+++.........+.+.+|+.+++.++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3568999999999999999999864 3599999987766667778899999999999999999999965 456789999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++++|.+++. .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 99 e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 99 QWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp ECCCEEEHHHHHT---TC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EecCCCcHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999986 2345689999999999999999999976 999999999999999999999999999875543
Q ss_pred CC---cccccCCCCCccCccccc---cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 429 AD---EALNNDAGSGYGAPEVAM---SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 429 ~~---~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
.. ......++..|+|||++. ...++.++||||||+++|||++|+.||........ +..... ..
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~---------~~ 241 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVG---------RG 241 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHH---------HT
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhc---------cc
Confidence 21 222345788999999986 56688899999999999999999999976432211 000000 00
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
...+. .......++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 242 ~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 242 SLSPD-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp SCCCC-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ccCcc-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 00011 11123455678999999999999999999999999998775
No 76
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-43 Score=358.69 Aligned_cols=249 Identities=27% Similarity=0.413 Sum_probs=206.7
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|.+.+.||+|+||.||+|.+ .+++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999986 57899999998643211 12245788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+ +|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 7899998853 34689999999999999999999987 99999999999999999999999999998776
Q ss_pred CCCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.........+++.|+|||++.+..+ +.++|||||||++|+|++|+.||......... +.+.
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------------~~i~- 221 (336)
T 3h4j_B 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------------KKVN- 221 (336)
T ss_dssp TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------------CCCC-
T ss_pred CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------------HHHH-
Confidence 6655566778899999999988776 68999999999999999999999753221000 0000
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
......+...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 222 ~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 222 SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01112344556789999999999999999999999864
No 77
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-42 Score=346.55 Aligned_cols=266 Identities=20% Similarity=0.285 Sum_probs=205.0
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47899999999999999999875 68999999998766656667888999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++ +|.+++. .....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFD---SCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHH---HTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9975 5655554 2345689999999999999999999976 9999999999999999999999999999866433
Q ss_pred C-cccccCCCCCccCccccccCC-CCccchHHhHHHHHHHHHhCCCCCCCCCchhh--hhhhh-hccccccChhHHhhhc
Q 008055 430 D-EALNNDAGSGYGAPEVAMSGQ-YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE--QSLVR-WATPQLHDIDALAKMV 504 (579)
Q Consensus 430 ~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~elltg~~p~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~ 504 (579)
. ......++..|+|||++.+.. ++.++|||||||++|||++|..||........ ..+.. ...+............
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 2 223446678999999998766 79999999999999999998888643332111 11111 1111111111111110
Q ss_pred Cc---------cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 505 DP---------ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 505 ~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+. ..........+..+.+|+.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 0001122345678899999999999999999999975
No 78
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=345.38 Aligned_cols=260 Identities=23% Similarity=0.373 Sum_probs=213.5
Q ss_pred CCccccc-eeccCCceEEEEEEeC---CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 271 GSFNVEN-LLGEGTFGRVYRAQFA---DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 271 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
++|.+.+ .||+|+||.||+|.+. ++..||+|+++... .....+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566666 8999999999999754 57889999997653 345567899999999999999999999999 5567999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+++++|.+++. .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHT---TCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHH---hCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 999999999999986 2345689999999999999999999976 9999999999999999999999999999876
Q ss_pred CCCCccc----ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 427 PNADEAL----NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 427 ~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
....... ...++..|+|||++.+..++.++||||||+++|||++ |+.||....... +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~~ 223 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----------------VM 223 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-----------------HH
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----------------HH
Confidence 4433221 2234568999999998889999999999999999999 999997643211 11
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
..+........+..++..+.+++.+||+.||++||++.++++.|+++..+....
T Consensus 224 ~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 224 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 111111222345566789999999999999999999999999999999776653
No 79
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.7e-43 Score=362.80 Aligned_cols=252 Identities=21% Similarity=0.332 Sum_probs=201.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 346 (579)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.... ......+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357999999999999999999876 5789999999765332 23345677888888776 89999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+++|+|..++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999863 34689999999999999999999976 9999999999999999999999999999863
Q ss_pred -CCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh-hhc
Q 008055 427 -PNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA-KMV 504 (579)
Q Consensus 427 -~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 504 (579)
..........+|+.|+|||++.+..++.++|||||||++|||++|+.||......... .......+. .+.
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~--------~~~~~~~~~~~i~ 275 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--------DQNTEDYLFQVIL 275 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------------CCHHHHHHHHH
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc--------chhhHHHHHHHHh
Confidence 3334445567889999999999999999999999999999999999999643211000 000001111 111
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCCh
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPM 538 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 538 (579)
. ....+|...+.++.+|+.+||+.||++||++
T Consensus 276 ~--~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 276 E--KQIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp H--CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred c--cccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 1123455567789999999999999999996
No 80
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.8e-43 Score=353.01 Aligned_cols=268 Identities=24% Similarity=0.408 Sum_probs=211.2
Q ss_pred CCccccceeccCCceEEEEEEe-----CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC--Ce
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-----ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY--GQ 343 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 343 (579)
.+|++.+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.+++.++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 3588899999999999999984 468999999997554 234467889999999999999999999999876 66
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 8999999999999999953 235689999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCc----ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc--cCh
Q 008055 424 SNMPNADE----ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL--HDI 497 (579)
Q Consensus 424 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~ 497 (579)
........ .....++..|+|||++.+..++.++||||||+++|||++|..|+...... ......+.. ...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~ 249 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL----FLKMIGPTHGQMTV 249 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH----HHHHHCSCCGGGHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH----HhhccCCcccccCH
Confidence 87654432 12234556799999999999999999999999999999999987532211 111111111 111
Q ss_pred hHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 498 DALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
..+...+........+...+..+.+++.+||+.||++|||+.++++.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1222222223333445667789999999999999999999999999999886
No 81
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-42 Score=359.36 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=207.3
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 47999999999999999999775 68999999997543 2335678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--CCceEEecccccccCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN--ELNPQLSDCGLASNMP 427 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~~~~~~ 427 (579)
|+++|+|.+++. .....+++..++.++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||++....
T Consensus 129 ~~~gg~L~~~l~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIA---AEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTT---CTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 999999999986 2345689999999999999999999976 9999999999999974 4779999999998776
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.........+|..|+|||++.+..++.++|||||||++|||++|..||......... . .+.. ....
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~--~-----------~i~~-~~~~ 268 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL--Q-----------NVKR-CDWE 268 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH--H-----------HHHH-CCCC
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH--H-----------HHHh-CCCC
Confidence 555445567888999999999999999999999999999999999999764321110 0 0000 0001
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.........+.++.+++.+||+.||++|||+.++++
T Consensus 269 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 269 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 111122345578999999999999999999999986
No 82
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=352.93 Aligned_cols=262 Identities=26% Similarity=0.455 Sum_probs=208.9
Q ss_pred hCCccccceeccCCceEEEEEEeCC-----CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFAD-----GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
..+|++.+.||+|+||.||+|.... +..||+|++.... .......+.+|+.+++.++||||+++++++.+.+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 4578888999999999999997643 2469999997544 344566789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 122 MIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999963 345689999999999999999999976 99999999999999999999999999997
Q ss_pred cCCCCCcc----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 425 NMPNADEA----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 425 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
........ ....++..|+|||++....++.++|||||||++|||++ |+.||.......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~----------------- 258 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----------------- 258 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------------
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-----------------
Confidence 65433211 11233567999999999999999999999999999999 999996543211
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
+...+........+..++..+.+++.+||+.||++||++.++++.|+++++.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 314 (333)
T 1mqb_A 259 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314 (333)
T ss_dssp HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred HHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 11111111122234456678999999999999999999999999999999765553
No 83
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1e-42 Score=353.14 Aligned_cols=262 Identities=25% Similarity=0.457 Sum_probs=210.6
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcE--EEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKV--LAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 346 (579)
++|++.+.||+|+||.||+|... ++.. +|+|.+.... .....+.+.+|+.+++++ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 46889999999999999999764 5654 4999986533 233456788999999999 99999999999999999999
Q ss_pred EEEecCCCChhhhhcccC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc
Q 008055 347 VYEFRKNGSLHDFLHLSD------------EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN 414 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~ 414 (579)
||||+++|+|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997432 2235789999999999999999999976 9999999999999999999
Q ss_pred eEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcccc
Q 008055 415 PQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 415 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
+||+|||+++............++..|+|||++....++.++|||||||++|||++ |+.||.......
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~----------- 249 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----------- 249 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----------
Confidence 99999999875443333333445678999999998889999999999999999998 999997643211
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
+...+........+...+..+.+++.+||+.||++|||+.++++.|+.++++..
T Consensus 250 ------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 250 ------LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ------HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ------HHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111111112223344566789999999999999999999999999999997654
No 84
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.9e-43 Score=351.70 Aligned_cols=266 Identities=23% Similarity=0.419 Sum_probs=206.9
Q ss_pred HHHhCCccccceeccCCceEEEEEEeC----CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQFA----DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG 342 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 342 (579)
.+..++|.+.+.||+|+||.||+|... .+..||+|++..........+.+.+|+.++++++||||+++++++.+.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 344567999999999999999999764 3458999999877666666788999999999999999999999997654
Q ss_pred -----eEEEEEEecCCCChhhhhcccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCce
Q 008055 343 -----QHLLVYEFRKNGSLHDFLHLSD--EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 343 -----~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3599999999999999985332 2345799999999999999999999965 99999999999999999999
Q ss_pred EEecccccccCCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcc
Q 008055 416 QLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 491 (579)
||+|||++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-------- 258 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-------- 258 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--------
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--------
Confidence 9999999976543321 112334568999999999999999999999999999999 8999976432211
Q ss_pred ccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 492 PQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
...+. .......+..++..+.+++.+||+.||++|||+.++++.|+.++++.
T Consensus 259 --------~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 259 --------YDYLL-HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp --------HHHHH-TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --------HHHHH-cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01111 11122334556678999999999999999999999999999998754
No 85
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.6e-43 Score=359.15 Aligned_cols=253 Identities=19% Similarity=0.293 Sum_probs=194.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||++... +++.||+|++...... ...+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 357999999999999999999876 7899999999764432 356789999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc--eEEecccccccC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN--PQLSDCGLASNM 426 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfg~~~~~ 426 (579)
||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999863 34589999999999999999999976 9999999999999987765 999999999755
Q ss_pred CCCCcccccCCCCCccCccccccCCCCcc-chHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNIK-SDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
..........+++.|+|||++.+..++.+ +|||||||++|+|++|+.||......... ...+.....
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------------~~~~~~~~~ 236 (361)
T 3uc3_A 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY------------RKTIQRILS 236 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH------------HHHHHHHHT
T ss_pred cccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH------------HHHHHHHhc
Confidence 44444455678899999999988887655 89999999999999999999754321000 011111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...........+..+.+|+.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 111111122345788999999999999999999999853
No 86
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=8.1e-43 Score=362.17 Aligned_cols=250 Identities=21% Similarity=0.347 Sum_probs=204.8
Q ss_pred CCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC--CCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH--HPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 348 (579)
.+|++.+.||+|+||.||++...+++.||||++..........+.+.+|+.++..++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 359999999999999999999888999999999876666667788999999999996 599999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
| +.+++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 568899999963 34688889999999999999999965 999999999999996 57999999999987644
Q ss_pred CCc---ccccCCCCCccCcccccc-----------CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 429 ADE---ALNNDAGSGYGAPEVAMS-----------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 429 ~~~---~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------------- 273 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------------- 273 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------------
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------------
Confidence 322 234567889999999865 46889999999999999999999999653221
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...+..++++.....++...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 --ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 122333344444444455556789999999999999999999999853
No 87
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-43 Score=353.59 Aligned_cols=262 Identities=23% Similarity=0.438 Sum_probs=218.6
Q ss_pred HHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
+...+|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 34567999999999999999999876 48899999997543 346788999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999642 345689999999999999999999987 9999999999999999999999999999866
Q ss_pred CCCCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhh
Q 008055 427 PNADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKM 503 (579)
Q Consensus 427 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
...... ....++..|+|||++.+..++.++||||||+++|+|++ |..||....... +...
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----------------~~~~ 224 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYEL 224 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----------------HHHH
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHH
Confidence 543321 12234567999999999999999999999999999999 999997643221 1111
Q ss_pred cCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 504 VDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
+........+..++..+.+++.+||+.||++|||+.++++.|+.+.++...
T Consensus 225 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 112222334455667899999999999999999999999999999987665
No 88
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.9e-43 Score=349.49 Aligned_cols=262 Identities=25% Similarity=0.416 Sum_probs=212.9
Q ss_pred HhCCccccc-eeccCCceEEEEEEeC---CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 269 ATGSFNVEN-LLGEGTFGRVYRAQFA---DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 269 ~~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
...+|.+.+ .||+|+||.||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 345788888 9999999999999542 468899999987665556678899999999999999999999999 56788
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999999999963 34589999999999999999999976 99999999999999999999999999998
Q ss_pred cCCCCCccc----ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 425 NMPNADEAL----NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 425 ~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
......... ...++..|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----------------- 228 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----------------- 228 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----------------
Confidence 765433221 1233567999999998889999999999999999999 999997644321
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
+...+........+..++..+.+++.+||+.||++|||+.++++.|+++..+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 229 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 11111111122344566788999999999999999999999999999999876654
No 89
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.5e-43 Score=355.50 Aligned_cols=257 Identities=24% Similarity=0.400 Sum_probs=205.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcE----EEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKV----LAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
..+|++.+.||+|+||.||+|.+. +++. ||+|.+..... ......+.+|+.+++.++||||+++++++. .+..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 347889999999999999999764 4443 78888754432 233456778999999999999999999986 4678
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 90 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999999863 234688899999999999999999976 99999999999999999999999999998
Q ss_pred cCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 425 NMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 425 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
........ ....++..|+|||++.+..++.++|||||||++|||++ |+.||........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----------------- 226 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV----------------- 226 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH-----------------
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH-----------------
Confidence 76543322 22344568999999999999999999999999999999 9999976432211
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
...+........+..++..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 227 PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp HHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111111112223344556788999999999999999999999999988753
No 90
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-42 Score=347.48 Aligned_cols=264 Identities=16% Similarity=0.199 Sum_probs=210.6
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+|+..++.+ +|+|++++++++.+....++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 45799999999999999999976 5789999999865432 23567888889888 899999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-----eEEecccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN-----PQLSDCGL 422 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfg~ 422 (579)
|||+ +++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 9999999973 244689999999999999999999965 9999999999999987776 99999999
Q ss_pred cccCCCCCc--------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 423 ASNMPNADE--------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 423 ~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
+........ .....++..|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~------ 231 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE------ 231 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH------
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH------
Confidence 976644322 233457889999999999999999999999999999999999997643211111100
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
.+................+..+.+++.+||+.||++|||+.+|++.|++++++...
T Consensus 232 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 232 ----RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp ----HHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ----HHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 00000000000001123457899999999999999999999999999999986654
No 91
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4e-43 Score=356.17 Aligned_cols=274 Identities=24% Similarity=0.358 Sum_probs=214.9
Q ss_pred CCccccceeccCCceEEEEEEe-----CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe--eCCe
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-----ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS--EYGQ 343 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 343 (579)
++|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+.++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 4788999999999999999984 468899999997643 445677899999999999999999999886 4567
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 89999999999999999632 23589999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCcc----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 424 SNMPNADEA----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 424 ~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
......... ....++..|+|||++.+..++.++||||||+++|+|++|..||........... .+ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~ 252 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM-GC-ERDVPALSR 252 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHC-C-----CCHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhc-cc-ccccccHHH
Confidence 876543321 223455679999999998999999999999999999999999865322111100 00 001112223
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
+...+........+..++..+.+++.+||+.||++|||+.++++.|+.+......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 3333334444455667788999999999999999999999999999988765544
No 92
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=361.64 Aligned_cols=250 Identities=21% Similarity=0.336 Sum_probs=201.5
Q ss_pred HhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 345 (579)
..++|++.+.||+|+||.||+|+.+ +++.||||++.+... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3568999999999999999999875 689999999965321 123456678899999887 7999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999863 34689999999999999999999976 999999999999999999999999999976
Q ss_pred CCCC-CcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 426 MPNA-DEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 426 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
.... .......+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----------------~~~~i~ 237 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----------------LFEAIL 237 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----------------HHHHHH
Confidence 4332 23345568889999999998899999999999999999999999997643321 111111
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCCh------HHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPM------SEVVQ 543 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~ 543 (579)
.. ...++...+..+.+++.+||+.||++||++ .++++
T Consensus 238 ~~--~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 238 ND--EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred cC--CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 112344556789999999999999999998 66663
No 93
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-42 Score=350.86 Aligned_cols=270 Identities=26% Similarity=0.410 Sum_probs=215.6
Q ss_pred ccccceeccCCceEEEEEEeC-----CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee--CCeEE
Q 008055 273 FNVENLLGEGTFGRVYRAQFA-----DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE--YGQHL 345 (579)
Q Consensus 273 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 345 (579)
|++.+.||+|+||.||++.+. +++.||||++.... .......+.+|+.++++++||||+++++++.+ ....+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488999999999999998653 68899999997653 34556789999999999999999999999987 46789
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 112 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999963 3489999999999999999999976 999999999999999999999999999987
Q ss_pred CCCCCc----ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 426 MPNADE----ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 426 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
...... .....++..|+|||++.+..++.++||||||+++|||++|..||........ ....+.... .....+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~ 261 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-ELIGIAQGQ-MTVLRLT 261 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHHCSCCHH-HHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-hhhcccccc-hhHHHHH
Confidence 654432 1223455679999999998999999999999999999999999965322110 011111100 0111223
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
..+........+..++..+.+++.+||+.||++|||+.++++.|+.+.++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 3333334444566777899999999999999999999999999999987654
No 94
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.2e-43 Score=347.01 Aligned_cols=259 Identities=24% Similarity=0.448 Sum_probs=212.3
Q ss_pred HhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
..++|++.+.||+|+||.||+|...++..||+|++..... ..+.+.+|+.+++.++||||+++++++. .+..++||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 86 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence 4467899999999999999999998888999999976543 2567899999999999999999999986 45689999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 87 EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp ECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999998632 123688999999999999999999976 999999999999999999999999999987654
Q ss_pred CCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 429 ADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 429 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.... ....++..|+|||++....++.++||||||+++|||++ |+.||....... +...+.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----------------~~~~~~ 224 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----------------VIQNLE 224 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHH
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----------------HHHHHh
Confidence 3322 12334568999999998889999999999999999999 999997643211 001111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
.......+...+..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 225 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred cccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 111222344566789999999999999999999999999999986544
No 95
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.2e-43 Score=360.79 Aligned_cols=273 Identities=19% Similarity=0.239 Sum_probs=207.1
Q ss_pred HhCCccccceeccCCceEEEEEEeCC------CcEEEEEEeCCCCCCch---------hHHHHHHHHHHHhhcCCCCccc
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFAD------GKVLAVKKIDSSALPSE---------MCDDFIEMVSNISQLHHPNIME 333 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~ 333 (579)
..++|++.+.||+|+||.||+|.+.. ++.||||++........ ....+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34579999999999999999998764 47899999865431100 0112344556677889999999
Q ss_pred eeeEEeeC----CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE
Q 008055 334 LVGYCSEY----GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 409 (579)
Q Consensus 334 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill 409 (579)
+++++... ...++||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4589999999 9999999963 345799999999999999999999976 99999999999999
Q ss_pred c--CCCceEEecccccccCCCCCcc--------cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCC
Q 008055 410 D--NELNPQLSDCGLASNMPNADEA--------LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSR 479 (579)
Q Consensus 410 ~--~~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~ 479 (579)
+ .++.+||+|||+++........ ....+|..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 8899999999999765433221 22347889999999999999999999999999999999999997432
Q ss_pred chhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 480 PRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
.... ...+..... ...+..++++.+. ...++.++.+++..||+.||++||++.+|++.|++++++....
T Consensus 266 ~~~~--~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 266 KDPK--YVRDSKIRY--RENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp TCHH--HHHHHHHHH--HHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCHH--HHHHHHHHh--hhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 1110 000000000 0111122221111 1234578999999999999999999999999999999876653
No 96
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.1e-42 Score=353.38 Aligned_cols=263 Identities=15% Similarity=0.195 Sum_probs=211.1
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.+++.+ +||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 45799999999999999999976 5789999999875432 23577899999999 999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-----eEEecccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN-----PQLSDCGL 422 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfg~ 422 (579)
|||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999 99999999732 45789999999999999999999976 9999999999999998887 99999999
Q ss_pred cccCCCCCc--------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 423 ASNMPNADE--------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 423 ~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
+........ .....+|..|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i---- 232 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI---- 232 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHH----
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHH----
Confidence 986543322 23456788999999999999999999999999999999999999764322111110000
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
.......... ......+ ++.+++..||+.||.+||++.+|++.|+++.++...
T Consensus 233 ---~~~~~~~~~~---~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 233 ---GDTKRATPIE---VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp ---HHHHHHSCHH---HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ---HhhhccCCHH---HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 0000000000 0011234 899999999999999999999999999999987755
No 97
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.2e-42 Score=347.92 Aligned_cols=267 Identities=25% Similarity=0.385 Sum_probs=206.5
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCC-CCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSA-LPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4689999999999999999976 578999999997643 33455678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999975444566789999999999999999999976 999999999999999999999999999876543
Q ss_pred CCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 ADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
... .....++..|+|||++.+..++.++||||||+++|+|++|+.||.......... ...+....
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--------------~~~~~~~~ 254 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--------------CKKIEQCD 254 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--------------HHHHHTTC
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--------------HHHhhccc
Confidence 322 223456789999999999999999999999999999999999996532211110 01111111
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
.........+..+.+++.+||+.||++|||+.++++.|+++......
T Consensus 255 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 11111234567899999999999999999999999999999876654
No 98
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.2e-43 Score=370.02 Aligned_cols=259 Identities=20% Similarity=0.281 Sum_probs=208.3
Q ss_pred HHHHHHHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEee
Q 008055 263 IADLQMATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSE 340 (579)
Q Consensus 263 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 340 (579)
+.++....++|++.+.||+|+||.||+|+.+ +++.||+|++.+... .......+.+|..++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4555666789999999999999999999876 478999999864221 11122347889999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecc
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDC 420 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Df 420 (579)
.+..++|||||++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999963 245689999999999999999999976 9999999999999999999999999
Q ss_pred cccccCCCCCcc--cccCCCCCccCccccc-----cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcccc
Q 008055 421 GLASNMPNADEA--LNNDAGSGYGAPEVAM-----SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 421 g~~~~~~~~~~~--~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
|+++........ ....+|+.|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---------- 289 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---------- 289 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH----------
Confidence 999766544332 2356889999999997 56789999999999999999999999976432211
Q ss_pred ccChhHHhhhcCccccCCCC---hhhHHHHHHHHHhcCCCCCCC--CCChHHHHH
Q 008055 494 LHDIDALAKMVDPALKGLYP---VKSLSRFADVIALCVQPEPEF--RPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 543 (579)
...++.......+| ...+.++.+|+.+||..+|++ ||++.|+++
T Consensus 290 ------~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 290 ------YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ------HHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ------HHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11111111011111 235578999999999999988 999999875
No 99
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.4e-43 Score=353.30 Aligned_cols=257 Identities=20% Similarity=0.411 Sum_probs=204.2
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcE----EEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKV----LAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+.... .......+.+|+.+++.++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 457999999999999999999764 4443 5777775433 2345678999999999999999999999998754 8
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++|+||+.+|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred eEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 899999999999999963 345689999999999999999999976 99999999999999999999999999997
Q ss_pred cCCCCCccc---ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 425 NMPNADEAL---NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 425 ~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
......... ...++..|+|||++.+..++.++|||||||++|||++ |..||....... +
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----------------~ 228 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------I 228 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------------H
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----------------H
Confidence 664433222 2234557999999999999999999999999999999 999997654321 1
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
...+........+..++..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 229 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111112222333455667899999999999999999999999999999853
No 100
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3e-43 Score=372.69 Aligned_cols=255 Identities=28% Similarity=0.467 Sum_probs=207.5
Q ss_pred HhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
..++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+.++++++||||+++++++.+ +..++||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 3457889999999999999999998888999999976543 25678999999999999999999999876 7789999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.++++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 999999999999632 234588999999999999999999976 999999999999999999999999999976543
Q ss_pred CCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 429 ADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 429 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.... ....++..|+|||++....++.++|||||||++|||++ |+.||....... +...+.
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----------------~~~~i~ 395 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----------------VLDQVE 395 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHH
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHH
Confidence 2211 12234568999999999999999999999999999999 999997643211 111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
...+...+..++..+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 396 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 396 RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 22223345567789999999999999999999999999998776
No 101
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-43 Score=351.39 Aligned_cols=246 Identities=24% Similarity=0.378 Sum_probs=205.3
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|+.. +|+.||+|++.+... .....+.+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 46899999999999999999875 689999999965321 1123567788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999963 34689999999999999999999965 999999999999999999999999999986543
Q ss_pred CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
......+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+....
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----------------~~~~i~~~~- 219 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----------------TYEKILNAE- 219 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----------------HHHHHHHCC-
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHhCC-
Confidence 2345578899999999999999999999999999999999999997643211 111111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCC-----ChHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRP-----PMSEVVQ 543 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 543 (579)
..++...+.++.+++.+||..||++|| ++.++++
T Consensus 220 -~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 220 -LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 123445567899999999999999999 8888873
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.6e-43 Score=368.33 Aligned_cols=257 Identities=21% Similarity=0.296 Sum_probs=207.6
Q ss_pred HHHHHHHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEee
Q 008055 263 IADLQMATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSE 340 (579)
Q Consensus 263 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 340 (579)
+.++....++|++.+.||+|+||.||+|+.+ +++.||+|++.+... .......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566788999999999999999999876 588999999864211 11123457789999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecc
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDC 420 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Df 420 (579)
.+..++||||+++|+|.++++. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 9999999999999999999862 3588999999999999999999976 9999999999999999999999999
Q ss_pred cccccCCCCCc--ccccCCCCCccCccccccCC----CCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 421 GLASNMPNADE--ALNNDAGSGYGAPEVAMSGQ----YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 421 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
|+++....... .....+|+.|+|||++.... ++.++|||||||++|||++|+.||.......
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------------ 280 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------------ 280 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH------------
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh------------
Confidence 99987654432 23567889999999998665 8899999999999999999999997643211
Q ss_pred cChhHHhhhcCccccCCCC--hhhHHHHHHHHHhcCCCCCCC--CCChHHHHH
Q 008055 495 HDIDALAKMVDPALKGLYP--VKSLSRFADVIALCVQPEPEF--RPPMSEVVQ 543 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 543 (579)
....++.......++ ...+.++.+|+.+||..+|.+ ||++.||++
T Consensus 281 ----~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 281 ----TYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp ----HHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ----HHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111111111111112 234578999999999999998 999999985
No 103
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.4e-42 Score=343.06 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=210.9
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999765 6899999999776666666788899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---eEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN---PQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~~~~ 425 (579)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999988863 34589999999999999999999976 9999999999999986655 99999999987
Q ss_pred CCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
...........++..|+|||++.+..++.++||||||+++|+|++|+.||............. .. .
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~-------------~~-~ 223 (284)
T 3kk8_A 158 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK-------------AG-A 223 (284)
T ss_dssp CCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-------------HT-C
T ss_pred cccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHH-------------hc-c
Confidence 766555555677889999999999999999999999999999999999997644321110000 00 0
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...........+..+.+++.+||+.||++|||+.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000111112345689999999999999999999999874
No 104
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-42 Score=345.40 Aligned_cols=266 Identities=20% Similarity=0.309 Sum_probs=203.2
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999875 58999999997776655667788899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999875 245689999999999999999999976 9999999999999999999999999999876533
Q ss_pred Cc-ccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhh-hhhhccccccChhHHh---hh
Q 008055 430 DE-ALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS-LVRWATPQLHDIDALA---KM 503 (579)
Q Consensus 430 ~~-~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~ 503 (579)
.. .....++..|+|||++.+ ..++.++||||||+++|+|++|+.||.......... +............... ..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 22 234456778999999976 668999999999999999999999997755432211 1111111100000000 00
Q ss_pred cC----ccccCCC-----ChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 504 VD----PALKGLY-----PVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 504 ~~----~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. +...... ....+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0000000 0234567899999999999999999999984
No 105
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.8e-43 Score=351.67 Aligned_cols=273 Identities=24% Similarity=0.438 Sum_probs=217.8
Q ss_pred cCHHHHHHHhCCccccceeccCCceEEEEEEe------CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccc
Q 008055 261 YSIADLQMATGSFNVENLLGEGTFGRVYRAQF------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIME 333 (579)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 333 (579)
+...++....++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.++.++ +||||++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 34455566678899999999999999999974 356899999997654 334456789999999999 7999999
Q ss_pred eeeEEeeCC-eEEEEEEecCCCChhhhhcccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEc
Q 008055 334 LVGYCSEYG-QHLLVYEFRKNGSLHDFLHLSDED------------NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHK 400 (579)
Q Consensus 334 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~ 400 (579)
+++++...+ ..++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987654 589999999999999999743221 12388999999999999999999976 99999
Q ss_pred CCCCCCEEEcCCCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCC
Q 008055 401 NIKSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFD 476 (579)
Q Consensus 401 Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~ 476 (579)
||||+|||++.++.+||+|||++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999765443221 12334668999999999999999999999999999998 999997
Q ss_pred CCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 477 SSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
...... .+...+........+...+..+.+++.+||+.||++|||+.++++.|+.+++...
T Consensus 253 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 253 GVKIDE----------------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp TCCCSH----------------HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ccchhH----------------HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 543211 0001111111122334456789999999999999999999999999999997654
No 106
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2e-42 Score=353.11 Aligned_cols=251 Identities=22% Similarity=0.337 Sum_probs=202.7
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
++|++.+.||+|+||.||+|+.+ +++.||+|++.+... .......+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46889999999999999999875 688999999976543 334456788899999887 899999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999863 24689999999999999999999976 99999999999999999999999999998643
Q ss_pred C-CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh-hhcC
Q 008055 428 N-ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA-KMVD 505 (579)
Q Consensus 428 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (579)
. ........+|+.|+|||++.+..++.++|||||||++|||++|+.||......... .......+. .+..
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--------~~~~~~~~~~~i~~ 233 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--------DQNTEDYLFQVILE 233 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------------CHHHHHHHHHH
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccc--------ccccHHHHHHHHHc
Confidence 2 23344567888999999999999999999999999999999999999643211000 000001111 1111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCCh
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPM 538 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 538 (579)
. ...++...+..+.+++.+||+.||++||++
T Consensus 234 ~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 234 K--QIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred C--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1 122455566789999999999999999996
No 107
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.5e-43 Score=357.33 Aligned_cols=251 Identities=22% Similarity=0.353 Sum_probs=204.6
Q ss_pred HHHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCe
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 343 (579)
....++|++.+.||+|+||.||+|+.+ +++.||+|++++... .......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999875 689999999965321 122355677888888876 99999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999963 34689999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCC-CcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 424 SNMPNA-DEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 424 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
+..... .......+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----------------~~~ 229 (345)
T 1xjd_A 166 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----------------FHS 229 (345)
T ss_dssp BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHH
T ss_pred hhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH----------------HHH
Confidence 764332 234456778899999999999999999999999999999999999976432211 001
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChH-HHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMS-EVV 542 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 542 (579)
+... ...++...+.++.+++.+||..||++||++. +++
T Consensus 230 i~~~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 230 IRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHhC--CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1000 1123444567899999999999999999997 665
No 108
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-42 Score=359.47 Aligned_cols=269 Identities=23% Similarity=0.324 Sum_probs=205.2
Q ss_pred hCCccccceeccC--CceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 270 TGSFNVENLLGEG--TFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 270 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
.++|++.+.||+| +||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3479999999999 99999999876 79999999998766666667888999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999998642 234589999999999999999999976 9999999999999999999999999987543
Q ss_pred CCCC--------cccccCCCCCccCcccccc--CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcccccc
Q 008055 427 PNAD--------EALNNDAGSGYGAPEVAMS--GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLH 495 (579)
Q Consensus 427 ~~~~--------~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~ 495 (579)
.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ........+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 2211 1122356778999999987 6799999999999999999999999976432211 000000000000
Q ss_pred Chh------------------HHhhhcC---------ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 496 DID------------------ALAKMVD---------PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 496 ~~~------------------~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+.. ....... ......++...+..+.+|+.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 0000000 00001123345578999999999999999999999985
No 109
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=377.35 Aligned_cols=259 Identities=23% Similarity=0.372 Sum_probs=209.7
Q ss_pred CCccccc-eeccCCceEEEEEEeC---CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 271 GSFNVEN-LLGEGTFGRVYRAQFA---DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 271 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
.++.+.+ .||+|+||.||+|.++ ++..||||+++... .....+.+.+|+.+++.++||||++++++|.. +..++
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 3444444 7999999999999764 46689999997653 33456889999999999999999999999976 56999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+++|+|.+++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 413 v~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 9999999999999962 345689999999999999999999976 9999999999999999999999999999876
Q ss_pred CCCCccc----ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 427 PNADEAL----NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 427 ~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
....... ...++..|+|||++....++.++|||||||++|||++ |+.||....... +.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----------------~~ 549 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----------------VM 549 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----------------HH
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----------------HH
Confidence 4432221 1223468999999999999999999999999999998 999997643321 11
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
..+....+...+..++..+.+|+.+||+.||++||++.+|++.|+.+......
T Consensus 550 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 550 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 11122223345566778999999999999999999999999999999876544
No 110
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=354.05 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=189.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 457999999999999999999876 57899999997543 2456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCceEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---ELNPQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~~~~ 425 (579)
||+++|+|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 128 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 128 ELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCCSCBHHHHHT----TCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EeCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 9999999999986 245689999999999999999999976 9999999999999975 88999999999987
Q ss_pred CCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
...........++..|+|||++.+..++.++|||||||++|||++|..||........ ....+..
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---------------~~~~i~~ 265 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---------------MFRRILN 265 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---------------HHHHHHT
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---------------HHHHHHh
Confidence 6544444455678899999999998999999999999999999999999965432210 0111111
Q ss_pred cc--ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 506 PA--LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 506 ~~--~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. .........+..+.+++.+||+.||++|||+.++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 266 CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 111122345678999999999999999999999875
No 111
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-42 Score=347.55 Aligned_cols=265 Identities=21% Similarity=0.359 Sum_probs=203.2
Q ss_pred HHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhh--cCCCCccceeeEEeeC---
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ--LHHPNIMELVGYCSEY--- 341 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~--- 341 (579)
....++|++.+.||+|+||.||+|... ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 344568999999999999999999876 899999998532 23444555555544 4999999999999877
Q ss_pred -CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEcCCCCCCEEEcCCCce
Q 008055 342 -GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC-----SLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 342 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ ..+|+||||||+|||++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 789999999999999999962 35899999999999999999999531 2289999999999999999999
Q ss_pred EEecccccccCCCCCcc-----cccCCCCCccCccccccCCCCcc------chHHhHHHHHHHHHhC----------CCC
Q 008055 416 QLSDCGLASNMPNADEA-----LNNDAGSGYGAPEVAMSGQYNIK------SDVYSFGVVMLELLTG----------RKP 474 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~------~DvwslGv~l~elltg----------~~p 474 (579)
||+|||++......... ....++..|+|||++.+..++.+ +|||||||++|||++| ..|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999765443322 23467889999999987766654 9999999999999999 445
Q ss_pred CCCCCchhhhhhhhhccccccChhHHhh-hcCccccCCCC-----hhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHH
Q 008055 475 FDSSRPRLEQSLVRWATPQLHDIDALAK-MVDPALKGLYP-----VKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRL 548 (579)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i 548 (579)
|...... ......+.. ..........+ ..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 262 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 262 YHDLVPS------------DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp TTTTSCS------------SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HhhhcCC------------CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 5332111 011111111 11122222233 36778899999999999999999999999999999
Q ss_pred HHHccc
Q 008055 549 VQRANM 554 (579)
Q Consensus 549 ~~~~~~ 554 (579)
.+...+
T Consensus 330 ~~~~~~ 335 (337)
T 3mdy_A 330 SESQDI 335 (337)
T ss_dssp HHTTTC
T ss_pred Hhhccc
Confidence 876543
No 112
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.9e-42 Score=347.29 Aligned_cols=269 Identities=21% Similarity=0.332 Sum_probs=192.2
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 457899999999999999999765 689999999975542 233567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 349 EFRKNGSLHDFLHLSD--EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||++ |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 69999886432 2234689999999999999999999976 9999999999999999999999999999866
Q ss_pred CCCC-cccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcc-ccccChhHHhh
Q 008055 427 PNAD-EALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWAT-PQLHDIDALAK 502 (579)
Q Consensus 427 ~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~ 502 (579)
.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.+... +..........
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 4322 2334567889999999976 4689999999999999999999999976543221 11111110 00000000000
Q ss_pred h--cCccc------------cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 503 M--VDPAL------------KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 503 ~--~~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ..+.. ....+...+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 00000 00111234568999999999999999999999875
No 113
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-42 Score=358.85 Aligned_cols=258 Identities=25% Similarity=0.454 Sum_probs=199.8
Q ss_pred CccccceeccCCceEEEEEEeC--CC--cEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe-eCCeEEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA--DG--KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS-EYGQHLL 346 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~l 346 (579)
.|++.+.||+|+||.||+|.+. ++ ..||+|.+.... .....+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4677889999999999999764 22 368999986533 3455688999999999999999999999875 4568899
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+++|+|.++++ .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 169 v~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEECCTTCBHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEECCCCCCHHHHHh---hcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 999999999999996 3345688999999999999999999976 9999999999999999999999999999765
Q ss_pred CCCCcc-----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 427 PNADEA-----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 427 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
...... ....++..|+|||++.+..++.++|||||||++|||++ |.+||.........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~---------------- 306 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT---------------- 306 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH----------------
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH----------------
Confidence 432211 12234567999999999999999999999999999999 77888653321100
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
..+. .......+..++..+.+++.+||+.||++|||+.++++.|++++....
T Consensus 307 ~~~~-~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 307 VYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHH-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0000 111122345566789999999999999999999999999999997554
No 114
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.1e-42 Score=343.06 Aligned_cols=258 Identities=24% Similarity=0.379 Sum_probs=207.2
Q ss_pred hCCccccceeccCCceEEEEEEeCC----CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFAD----GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
.++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... .....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4578899999999999999997643 3469999997653 34456789999999999999999999999875 4578
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999963 235688999999999999999999976 999999999999999999999999999976
Q ss_pred CCCCCcc--cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 426 MPNADEA--LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 426 ~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
....... ....++..|+|||++.+..++.++||||||+++|||++ |+.||.......... .+.
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~-------------~~~- 228 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-------------VLE- 228 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH-------------HHH-
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH-------------HHh-
Confidence 6443221 22334568999999998899999999999999999998 999997543221110 011
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
.......+..++..+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 229 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 229 ---KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ---HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 11111233445678999999999999999999999999999998754
No 115
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.3e-43 Score=345.85 Aligned_cols=255 Identities=23% Similarity=0.352 Sum_probs=208.8
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe--eCCeEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS--EYGQHLLV 347 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv 347 (579)
++|++.+.||+|+||.||++... +++.||+|++..........+.+.+|+.++++++||||+++++++. ..+..++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 47899999999999999999775 7899999999877666666788999999999999999999999874 46789999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEEcCCCCCCEEEcCCCceEEecccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLS-----VVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
|||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999975544556699999999999999999999987 6 99999999999999999999999999
Q ss_pred cccCCCCCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 423 ASNMPNADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 423 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
+........ .....++..|+|||++.+..++.++||||||+++|+|++|+.||......... ..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------------~~i~ 229 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA-------------GKIR 229 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------------HHHH
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHH-------------HHHh
Confidence 876644322 12345688999999999989999999999999999999999999764321100 0011
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 545 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 545 (579)
. ......+...+.++.+++.+||+.||++|||+.++++.+
T Consensus 230 ~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 230 E----GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp H----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred h----cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 1 111123445567899999999999999999999998754
No 116
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-42 Score=365.81 Aligned_cols=249 Identities=25% Similarity=0.433 Sum_probs=208.7
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357999999999999999999875 7999999999643211 12356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 95 ~E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999985 345689999999999999999999965 99999999999999999999999999998776
Q ss_pred CCCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.........+++.|+|||++.+..+ +.++|||||||++|||++|+.||....... ....+.+.
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~----------------~~~~i~~~ 231 (476)
T 2y94_A 168 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT----------------LFKKICDG 231 (476)
T ss_dssp TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH----------------HHHHHHTT
T ss_pred ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH----------------HHHHHhcC
Confidence 6555556678899999999988776 689999999999999999999997643211 11111111
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ...+...+..+.+++.+||+.||++|||+.++++
T Consensus 232 ~--~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 232 I--FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp C--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1 1123445578999999999999999999999986
No 117
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-42 Score=355.12 Aligned_cols=250 Identities=19% Similarity=0.281 Sum_probs=204.6
Q ss_pred HhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 345 (579)
..++|++.+.||+|+||.||+|+.+ +++.||+|++++... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4568999999999999999999876 478999999965321 123356778899999887 8999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999863 24589999999999999999999976 999999999999999999999999999986
Q ss_pred CCC-CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 426 MPN-ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 426 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
... ........+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----------------~~~~i~ 234 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----------------LFQSIM 234 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH----------------HHHHHH
Confidence 432 233445678889999999999999999999999999999999999997643211 111111
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCCh-----HHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPM-----SEVVQ 543 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~ 543 (579)
.. ...++...+.++.+++.+||..||++||++ .++++
T Consensus 235 ~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 235 EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HC--CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred hC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11 112345566789999999999999999964 55553
No 118
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8.2e-43 Score=354.78 Aligned_cols=265 Identities=24% Similarity=0.412 Sum_probs=213.6
Q ss_pred HhCCccccceeccCCceEEEEEEeCC------CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeC
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFAD------GKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEY 341 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 341 (579)
..++|++.+.||+|+||.||+|.... ...||+|.+.... .....+.+.+|+.+++.+ +||||+++++++.+.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 35689999999999999999998642 2479999997654 234567889999999999 899999999999999
Q ss_pred CeEEEEEEecCCCChhhhhcccCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDE----------DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN 411 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~ 411 (579)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 999999999999999999864321 134678999999999999999999976 9999999999999999
Q ss_pred CCceEEecccccccCCCCCcc---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhh
Q 008055 412 ELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLV 487 (579)
Q Consensus 412 ~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~ 487 (579)
++.+||+|||++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----- 274 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----- 274 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-----
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-----
Confidence 999999999999755332221 12234568999999999999999999999999999999 999997543211
Q ss_pred hhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 488 RWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
.+...+........+...+..+.+++.+||+.||++|||+.++++.|+++.++..
T Consensus 275 -----------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 275 -----------KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp -----------HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 1111111112222344456789999999999999999999999999999887654
No 119
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.9e-42 Score=340.92 Aligned_cols=247 Identities=26% Similarity=0.409 Sum_probs=183.1
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4799999999999999999976 47899999999765433 344667889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+ +++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 7788888752 34689999999999999999999976 999999999999999999999999999987655
Q ss_pred CCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
........++..|+|||++.+..+ +.++|||||||++|||++|+.||.......... .+..
T Consensus 165 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------------~~~~----- 226 (275)
T 2eue_A 165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-------------NISN----- 226 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------------HHHH-----
T ss_pred cccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------HHHh-----
Confidence 554455667889999999987765 789999999999999999999997643221100 0000
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.....+...+..+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 227 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 011234445678999999999999999999999975
No 120
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=358.99 Aligned_cols=277 Identities=20% Similarity=0.289 Sum_probs=215.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC--eEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG--QHLLV 347 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 347 (579)
++|.+.+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 47899999999999999999876 589999999975432 233577889999999999999999999998655 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE----cCCCceEEeccccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL----DNELNPQLSDCGLA 423 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg~~ 423 (579)
|||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 99999999999997432 223489999999999999999999976 99999999999999 77788999999999
Q ss_pred ccCCCCCcccccCCCCCccCcccccc--------CCCCccchHHhHHHHHHHHHhCCCCCCCCCch--hhhhhhhhcccc
Q 008055 424 SNMPNADEALNNDAGSGYGAPEVAMS--------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPR--LEQSLVRWATPQ 493 (579)
Q Consensus 424 ~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGv~l~elltg~~p~~~~~~~--~~~~~~~~~~~~ 493 (579)
+............++..|+|||++.. ..++.++|||||||++|||++|+.||...... ....+.......
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 88766555556678899999999865 56788999999999999999999999643221 111111110000
Q ss_pred cc-ChhHHhh-------hc-CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 494 LH-DIDALAK-------MV-DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 494 ~~-~~~~~~~-------~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
.. ....+.. +. +.......+...+..+.+++.+||+.||++|||+.++++.+..++++.
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 00 0000000 00 001112344677889999999999999999999999999999998753
No 121
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-42 Score=351.00 Aligned_cols=249 Identities=20% Similarity=0.324 Sum_probs=196.9
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC-------
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG------- 342 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 342 (579)
++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||++++++|.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 46899999999999999999876 79999999997554 2345678999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEEecCCCChhhhhcccCCCCCCCCH
Q 008055 343 --------------------------------------------------QHLLVYEFRKNGSLHDFLHLSDEDNKPLIW 372 (579)
Q Consensus 343 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 372 (579)
..++||||+++|+|.+++.... ......+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchhh
Confidence 3799999999999999997432 2234567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCCC-------------cccccCCCC
Q 008055 373 NSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD-------------EALNNDAGS 439 (579)
Q Consensus 373 ~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~ 439 (579)
..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... ......++.
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 78899999999999999976 99999999999999999999999999998765432 122345788
Q ss_pred CccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHH
Q 008055 440 GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSR 519 (579)
Q Consensus 440 ~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (579)
.|+|||++.+..++.++|||||||++|||++|..|+.... . ......... ...........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----~--------------~~~~~~~~~-~~~~~~~~~~~ 301 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----R--------------IITDVRNLK-FPLLFTQKYPQ 301 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----H--------------HHHHHHTTC-CCHHHHHHCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----H--------------HHHHhhccC-CCcccccCChh
Confidence 9999999999999999999999999999999877652110 0 000000000 00011233457
Q ss_pred HHHHHHhcCCCCCCCCCChHHHHH
Q 008055 520 FADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 520 l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+.+++.+||+.||++|||+.|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 789999999999999999999985
No 122
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.6e-42 Score=354.30 Aligned_cols=246 Identities=22% Similarity=0.326 Sum_probs=205.5
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 47899999999999999999875 689999999864321 1233567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999963 24589999999999999999999976 999999999999999999999999999987643
Q ss_pred CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
. .....+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...
T Consensus 194 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----------------~~~~i~~~-- 253 (350)
T 1rdq_E 194 R--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ----------------IYEKIVSG-- 253 (350)
T ss_dssp C--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHHC--
T ss_pred C--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH----------------HHHHHHcC--
Confidence 2 334567889999999999999999999999999999999999997643211 11111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCC-----hHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPP-----MSEVVQ 543 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 543 (579)
...++...+..+.+++.+||+.||++||+ +.++++
T Consensus 254 ~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11234456678999999999999999998 787764
No 123
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-42 Score=344.91 Aligned_cols=252 Identities=21% Similarity=0.365 Sum_probs=206.9
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee--------
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE-------- 340 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 340 (579)
..+|++.+.||+|+||.||+|... +++.||+|++.... ..+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 346999999999999999999876 79999999996543 346689999999999999999998854
Q ss_pred --------CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC
Q 008055 341 --------YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 412 (579)
Q Consensus 341 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~ 412 (579)
....++||||+++|+|.+++... ....+++..++.++.|++.||.|||++ +|+||||||+|||++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 45579999999999999999642 235688999999999999999999976 99999999999999999
Q ss_pred CceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccc
Q 008055 413 LNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP 492 (579)
Q Consensus 413 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 492 (579)
+.+||+|||++.............++..|+|||++.+..++.++||||||+++|||++|..||.... .
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~-------- 226 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----K-------- 226 (284)
T ss_dssp TEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----H--------
T ss_pred CCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----H--------
Confidence 9999999999987766555555667889999999999999999999999999999999998873210 0
Q ss_pred cccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 493 QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
........ ..+...+..+.+++.+||+.||++|||+.++++.|+.+.+....
T Consensus 227 ------~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 227 ------FFTDLRDG----IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp ------HHHHHHTT----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred ------HHHHhhcc----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 00111111 12233456789999999999999999999999999887654443
No 124
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.9e-42 Score=349.67 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=195.1
Q ss_pred hCCccccceeccCCceEEEEEEe----CCCcEEEEEEeCCCCCC--chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF----ADGKVLAVKKIDSSALP--SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
.++|++.+.||+|+||.||+++. .+++.||+|+++..... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35799999999999999999987 47899999999765432 2334567889999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999863 34588999999999999999999976 9999999999999999999999999998
Q ss_pred ccCCCCC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 424 SNMPNAD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 424 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
+...... ......++..|+|||++.+..++.++|||||||++|||++|+.||....... .+..
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------------~~~~ 232 (327)
T 3a62_A 169 KESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----------------TIDK 232 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------HHHH
T ss_pred cccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----------------HHHH
Confidence 7543322 2334567889999999999999999999999999999999999997643211 1111
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCC-----ChHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRP-----PMSEVVQ 543 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 543 (579)
+... ...++...+..+.+++.+||+.||++|| ++.++++
T Consensus 233 i~~~--~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 233 ILKC--KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHT--CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHhC--CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1111 1123445567899999999999999999 6667764
No 125
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8e-42 Score=348.73 Aligned_cols=266 Identities=24% Similarity=0.391 Sum_probs=210.2
Q ss_pred HHHHHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhh--cCCCCccceeeEEee
Q 008055 263 IADLQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ--LHHPNIMELVGYCSE 340 (579)
Q Consensus 263 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~ 340 (579)
+.-.....++|++.+.||+|+||.||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 333445567899999999999999999987 4899999998532 35667788888876 799999999999987
Q ss_pred CC----eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCEE
Q 008055 341 YG----QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLH--------EVCSLSVVHKNIKSANIL 408 (579)
Q Consensus 341 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~iiH~Dlkp~Nil 408 (579)
.. ..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 65 78999999999999999963 35899999999999999999999 54 9999999999999
Q ss_pred EcCCCceEEecccccccCCCCCc-----ccccCCCCCccCccccccC------CCCccchHHhHHHHHHHHHhC------
Q 008055 409 LDNELNPQLSDCGLASNMPNADE-----ALNNDAGSGYGAPEVAMSG------QYNIKSDVYSFGVVMLELLTG------ 471 (579)
Q Consensus 409 l~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~elltg------ 471 (579)
++.++.+||+|||++........ .....++..|+|||++.+. .++.++|||||||++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 99999999999999976544332 2334577899999999765 344789999999999999999
Q ss_pred ----CCCCCCCCchhhhhhhhhccccccChhHHh-hhcCccccCCCC-----hhhHHHHHHHHHhcCCCCCCCCCChHHH
Q 008055 472 ----RKPFDSSRPRLEQSLVRWATPQLHDIDALA-KMVDPALKGLYP-----VKSLSRFADVIALCVQPEPEFRPPMSEV 541 (579)
Q Consensus 472 ----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ev 541 (579)
..||....... .....+. .+.........+ ..++..+.+++.+||+.||++|||+.+|
T Consensus 260 ~~~~~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSD------------PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp CCCCCCTTTTTSCSS------------CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccccccCccccCcCc------------ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 67775432110 0011111 111222222222 3567789999999999999999999999
Q ss_pred HHHHHHHHHHccc
Q 008055 542 VQALVRLVQRANM 554 (579)
Q Consensus 542 l~~L~~i~~~~~~ 554 (579)
++.|+++.++...
T Consensus 328 ~~~L~~i~~~~~~ 340 (342)
T 1b6c_B 328 KKTLSQLSQQEGI 340 (342)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhcC
Confidence 9999999987654
No 126
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=355.05 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=200.3
Q ss_pred ccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEEecCC
Q 008055 275 VENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKN 353 (579)
Q Consensus 275 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 353 (579)
..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 3578999999999999764 68999999997643 24467889999999999999999999999999999999999999
Q ss_pred CChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE--cCCCceEEecccccccCCCCCc
Q 008055 354 GSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL--DNELNPQLSDCGLASNMPNADE 431 (579)
Q Consensus 354 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill--~~~~~~kl~Dfg~~~~~~~~~~ 431 (579)
|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 171 ~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 171 GELFDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp CEEHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 999998862 234689999999999999999999976 99999999999999 5678899999999988766555
Q ss_pred ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhccccccChhHHhhhcCccccC
Q 008055 432 ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLHDIDALAKMVDPALKG 510 (579)
Q Consensus 432 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (579)
.....+++.|+|||++....++.++|||||||++|||++|+.||........ ..+..... ....
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------~~~~ 309 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW---------------DLED 309 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC---------------CSCS
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC---------------CCCh
Confidence 5556788999999999988999999999999999999999999976543211 11110000 0000
Q ss_pred CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH--HHHHH
Q 008055 511 LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ--ALVRL 548 (579)
Q Consensus 511 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~i 548 (579)
......+.++.+|+.+||+.||++|||+.|+++ .+...
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 011234568999999999999999999999996 44433
No 127
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.6e-42 Score=343.15 Aligned_cols=248 Identities=20% Similarity=0.308 Sum_probs=204.7
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... +++.||+|++............+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 457999999999999999999876 799999999987666566677888999999988 999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC---------------
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE--------------- 412 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~--------------- 412 (579)
|||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999975444346789999999999999999999976 99999999999999844
Q ss_pred ----CceEEecccccccCCCCCcccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhh
Q 008055 413 ----LNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLV 487 (579)
Q Consensus 413 ----~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~ 487 (579)
..+||+|||++....... ...++..|+|||++.+. .++.++|||||||++|+|++|.+|+.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~------- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ------- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-------
T ss_pred cCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-------
Confidence 479999999998765432 34578899999999765 567899999999999999999887643211
Q ss_pred hhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 488 RWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...+.. ......+...+..+.+++.+||+.||++|||+.++++
T Consensus 237 ------------~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ------------WHEIRQ-GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ------------HHHHHT-TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------------HHHHHc-CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 001111 1112234455678999999999999999999999975
No 128
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-42 Score=342.43 Aligned_cols=252 Identities=26% Similarity=0.365 Sum_probs=199.9
Q ss_pred CccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEEe
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEF 350 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 350 (579)
+|.+.+.||+|+||.||++... ++..+|+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 6889999999999999999764 688999999875442 23367889999999999999999999999999999999999
Q ss_pred cCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEecccccccCC
Q 008055 351 RKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLASNMP 427 (579)
Q Consensus 351 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~ 427 (579)
+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999865444456799999999999999999999976 99999999999999 456789999999998765
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.........++..|+|||++. ..++.++||||||+++|||++|+.||.............+..+ .
T Consensus 179 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--------------~ 243 (285)
T 3is5_A 179 SDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP--------------N 243 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--------------C
T ss_pred CcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCc--------------c
Confidence 554455566788999999875 5789999999999999999999999976543221111111111 1
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 YA-VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC-C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cc-cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 001123467889999999999999999999975
No 129
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-43 Score=364.09 Aligned_cols=260 Identities=20% Similarity=0.280 Sum_probs=206.3
Q ss_pred HHHHHHHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEee
Q 008055 263 IADLQMATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSE 340 (579)
Q Consensus 263 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 340 (579)
+.+.....++|++.+.||+|+||.||+++.+ +|+.||+|++.+... .......+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 4455566789999999999999999999875 789999999964321 12233457889999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecc
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDC 420 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Df 420 (579)
.+..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999632 34689999999999999999999976 9999999999999999999999999
Q ss_pred cccccCCCCCc--ccccCCCCCccCccccc-------cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh-hhhhhhhc
Q 008055 421 GLASNMPNADE--ALNNDAGSGYGAPEVAM-------SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL-EQSLVRWA 490 (579)
Q Consensus 421 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~-~~~~~~~~ 490 (579)
|+++....... .....+|+.|+|||++. ...++.++|||||||++|||++|+.||....... ...+..+.
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~ 286 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK 286 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 99987654433 22356889999999997 3568999999999999999999999997643321 11111100
Q ss_pred cccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCC---CChHHHHH
Q 008055 491 TPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFR---PPMSEVVQ 543 (579)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~ 543 (579)
. ... ....+...+.++.+|+.+||. +|++| |++.|+++
T Consensus 287 ~----------~~~----~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 287 E----------HLS----LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp H----------HCC----CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred c----------CcC----CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0 000 011123455789999999999 99998 58888864
No 130
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=344.89 Aligned_cols=270 Identities=22% Similarity=0.300 Sum_probs=199.6
Q ss_pred HHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCC---CchhHHHHHHHHHHHhhc---CCCCccceeeEEee
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSAL---PSEMCDDFIEMVSNISQL---HHPNIMELVGYCSE 340 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~ 340 (579)
...++|++.+.||+|+||.||+|.. .+++.||+|++..... .......+.+|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467899999999999999999986 4789999999864321 112234455566665554 59999999999977
Q ss_pred CC-----eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCce
Q 008055 341 YG-----QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 341 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
.. ..++||||+. |+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 55 5799999996 6999998632 233489999999999999999999976 99999999999999999999
Q ss_pred EEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhc-ccc
Q 008055 416 QLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWA-TPQ 493 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~-~~~ 493 (579)
||+|||+++............+|..|+|||++.+..++.++|||||||++|||++|+.||........ ..+.... .+.
T Consensus 160 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 160 KLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp EECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred EEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999999877655555556778999999999999999999999999999999999999976543221 1111110 000
Q ss_pred ccChh---HHh-hhcCcccc---CCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 LHDID---ALA-KMVDPALK---GLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~~---~~~-~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..... ... ....+... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000 000 00000000 0011234568899999999999999999999875
No 131
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.9e-44 Score=358.56 Aligned_cols=258 Identities=24% Similarity=0.379 Sum_probs=188.4
Q ss_pred CCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhh--cCCCCccceeeEEeeCC----eE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ--LHHPNIMELVGYCSEYG----QH 344 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~ 344 (579)
++|.+.+.||+|+||.||+|.+. ++.||||++... ....+..|.+++.. ++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 57899999999999999999875 889999998643 24567778888776 79999999999998776 78
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCEEEcCCCceE
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLH--------EVCSLSVVHKNIKSANILLDNELNPQ 416 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~iiH~Dlkp~Nill~~~~~~k 416 (579)
++||||+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 999999999999999963 35778889999999999999999 55 999999999999999999999
Q ss_pred EecccccccCCCCCcc-----cccCCCCCccCccccccC------CCCccchHHhHHHHHHHHHhC----------CCCC
Q 008055 417 LSDCGLASNMPNADEA-----LNNDAGSGYGAPEVAMSG------QYNIKSDVYSFGVVMLELLTG----------RKPF 475 (579)
Q Consensus 417 l~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~elltg----------~~p~ 475 (579)
|+|||++......... ....++..|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 9999998655433322 123578899999999766 455789999999999999999 5555
Q ss_pred CCCCchhhhhhhhhccccccChhHHhhhcCccccCCCCh-----hhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHH
Q 008055 476 DSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPV-----KSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQ 550 (579)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 550 (579)
....... ...................+. .++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 229 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 229 YDLVPSD-----------PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTCC-C-----------CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cccCCCC-----------ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 3321100 000011111222233333332 566789999999999999999999999999998876
Q ss_pred Hcc
Q 008055 551 RAN 553 (579)
Q Consensus 551 ~~~ 553 (579)
+.+
T Consensus 298 ~~~ 300 (303)
T 3gxj_A 298 QEG 300 (303)
T ss_dssp C--
T ss_pred hcc
Confidence 554
No 132
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.1e-42 Score=346.66 Aligned_cols=256 Identities=25% Similarity=0.385 Sum_probs=194.0
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|.. .+++.||+|++............+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45799999999999999999986 47899999999766544444455566666688899999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||++ |+|.+++.........+++..++.++.|++.||+|||++ .+|+||||||+|||++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 588888765444567899999999999999999999963 2899999999999999999999999999987655
Q ss_pred CCcccccCCCCCccCcccc----ccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 429 ADEALNNDAGSGYGAPEVA----MSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
........++..|+|||++ ....++.++|||||||++|||++|+.||........ .+....
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------------~~~~~~ 227 (290)
T 3fme_A 163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ---------------QLKQVV 227 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH---------------HHHHHH
T ss_pred cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH---------------HHHHHh
Confidence 5444455788899999996 456789999999999999999999999975332111 111111
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
........+...+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111111222345678999999999999999999999987
No 133
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.9e-42 Score=343.36 Aligned_cols=258 Identities=25% Similarity=0.440 Sum_probs=205.9
Q ss_pred CCccccceeccCCceEEEEEEeCC----CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe-eCCeEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFAD----GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS-EYGQHL 345 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~ 345 (579)
.+|++.+.||+|+||.||+|.+.+ ...+|+|.+.... .....+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 358888999999999999997643 2368999987533 3455678899999999999999999999864 556889
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.+++. .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus 104 ~v~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHH---CTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 9999999999999996 2345688999999999999999999976 999999999999999999999999999976
Q ss_pred CCCCCc-----ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 426 MPNADE-----ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 426 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
...... .....++..|+|||.+.+..++.++||||||+++|||++ |.+||.........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~--------------- 242 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--------------- 242 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH---------------
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH---------------
Confidence 644322 112334567999999999999999999999999999999 56666543221100
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
... ........+..++..+.+++.+||+.||++|||+.++++.|++++...
T Consensus 243 -~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 243 -VYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -HHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -HHH-hcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 000 011112224445678999999999999999999999999999998643
No 134
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=352.97 Aligned_cols=244 Identities=24% Similarity=0.342 Sum_probs=205.6
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCch------hHHHHHHHHHHHhhcCCCCccceeeEEeeCC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSE------MCDDFIEMVSNISQLHHPNIMELVGYCSEYG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 342 (579)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45799999999999999999975 4789999999976543221 3446778999999999999999999999999
Q ss_pred eEEEEEEecCCC-ChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccc
Q 008055 343 QHLLVYEFRKNG-SLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 421 (579)
Q Consensus 343 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 421 (579)
..++||||+.+| +|.+++. ....+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 999999999777 9999986 344689999999999999999999976 99999999999999999999999999
Q ss_pred ccccCCCCCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 422 LASNMPNADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
++.............++..|+|||++.+..+ +.++|||||||++|||++|..||......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------- 236 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------- 236 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------
Confidence 9987766555556678899999999988877 78999999999999999999999642110
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
.... ...+...+.++.+++.+||+.||++|||+.++++.
T Consensus 237 ---~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ---VEAA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---Hhhc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 01122345689999999999999999999999874
No 135
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=350.53 Aligned_cols=273 Identities=24% Similarity=0.374 Sum_probs=213.3
Q ss_pred hCCccccceeccCCceEEEEEEe-----CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC--
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-----ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG-- 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 342 (579)
.++|++.+.||+|+||.||++.+ .+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 34688999999999999999984 368999999997643 455678999999999999999999999987644
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 78999999999999999973 234689999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcc----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChh
Q 008055 423 ASNMPNADEA----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDID 498 (579)
Q Consensus 423 ~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 498 (579)
+......... ....++..|+|||++.+..++.++||||||+++|||++|..||.................. ....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~-~~~~ 270 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ-MIVF 270 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTH-HHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchh-hhHH
Confidence 9876543321 1223455799999999888999999999999999999999998643211111000000000 0001
Q ss_pred HHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 499 ALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
.+.+.+........+..++..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 12222222223334566778999999999999999999999999999998765
No 136
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=350.75 Aligned_cols=275 Identities=21% Similarity=0.341 Sum_probs=199.9
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHH--HhhcCCCCccceeeEEee-----CC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSN--ISQLHHPNIMELVGYCSE-----YG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~ 342 (579)
.++|++.+.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 45799999999999999999976 68999999986432 3444444444 456899999999986532 33
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEEcCCCCCCEEEcCCCceE
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC------SLSVVHKNIKSANILLDNELNPQ 416 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~iiH~Dlkp~Nill~~~~~~k 416 (579)
..++||||+++|+|.+++.. ...++..++.++.|++.||+|||+.+ ..+|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 67899999999999999963 33588899999999999999999431 11999999999999999999999
Q ss_pred EecccccccCCCCC---------cccccCCCCCccCcccccc-------CCCCccchHHhHHHHHHHHHhCCCCCCCCCc
Q 008055 417 LSDCGLASNMPNAD---------EALNNDAGSGYGAPEVAMS-------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRP 480 (579)
Q Consensus 417 l~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGv~l~elltg~~p~~~~~~ 480 (579)
|+|||++....... ......+|..|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999997654321 1223457889999999976 4567899999999999999999777643221
Q ss_pred hh-hhhhhhhccccccChhHHhh-hcCccccCCCC------hhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 481 RL-EQSLVRWATPQLHDIDALAK-MVDPALKGLYP------VKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 481 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
.. .................+.. ......+..++ ..++..+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 11 00000000000111111111 11112222222 236678999999999999999999999999999999766
Q ss_pred ccc
Q 008055 553 NMS 555 (579)
Q Consensus 553 ~~~ 555 (579)
...
T Consensus 321 ~~~ 323 (336)
T 3g2f_A 321 ERN 323 (336)
T ss_dssp CC-
T ss_pred Hhc
Confidence 643
No 137
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-42 Score=341.79 Aligned_cols=258 Identities=23% Similarity=0.406 Sum_probs=206.3
Q ss_pred CccccceeccCCceEEEEEEeCC-C---cEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE-EE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFAD-G---KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH-LL 346 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~l 346 (579)
.|.+.+.||+|+||.||+|.+.+ + ..+|+|++.... .....+.+.+|+.+++.++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 45667899999999999997532 2 379999997533 344567889999999999999999999999776655 99
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||+.+|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 101 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999963 345688999999999999999999976 9999999999999999999999999999765
Q ss_pred CCCCc-----ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCC-CCCCCchhhhhhhhhccccccChhHH
Q 008055 427 PNADE-----ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP-FDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 427 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
..... .....++..|+|||.+.+..++.++||||||+++|+|++|..| |....... +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-----------------~ 237 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-----------------L 237 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-----------------H
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-----------------H
Confidence 43221 1223445689999999999999999999999999999995554 44332211 1
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
...+........+...+..+.+++.+||+.||++|||+.++++.|+++++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 238 THFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 11111111222344556789999999999999999999999999999997654
No 138
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.7e-42 Score=346.23 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=206.8
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCc----hhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPS----EMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
++|++.+.||+|+||.||+|... +|+.||+|++....... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 46899999999999999999875 68999999997654322 23577899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----ceEEeccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL----NPQLSDCG 421 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg 421 (579)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999962 45689999999999999999999976 999999999999999887 79999999
Q ss_pred ccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 422 LASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
++.............++..|+|||++.+..++.++|||||||++|+|++|..||......... .......
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~i~~~~-------- 234 (321)
T 2a2a_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--ANITSVS-------- 234 (321)
T ss_dssp TCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH--HHHHTTC--------
T ss_pred cceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHhcc--------
Confidence 998776555445566788999999999999999999999999999999999999764322110 0000000
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...........+..+.+++.+||+.||++|||+.++++
T Consensus 235 ----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 235 ----YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ----CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ----cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000001233467899999999999999999999985
No 139
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.5e-42 Score=357.05 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=195.5
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHH-HhhcCCCCccceeeEEeeCCeEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSN-ISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
++|++.+.||+|+||.||+|+.+ +++.||+|++.+.... ......+..|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 47999999999999999999875 5889999999765432 2334455666666 5778999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999863 34688999999999999999999976 99999999999999999999999999997632
Q ss_pred -CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 -NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.........+|+.|+|||++.+..++.++|||||||++|||++|..||....... ....++..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----------------~~~~i~~~ 254 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----------------MYDNILNK 254 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH----------------HHHHHHHS
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH----------------HHHHHHhc
Confidence 2333445678899999999999999999999999999999999999997643211 11111111
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
. ..++...+..+.+++.+||+.||++||++.+.++.
T Consensus 255 ~--~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 255 P--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp C--CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred c--cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 1 12334456789999999999999999998644433
No 140
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-41 Score=354.37 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=190.3
Q ss_pred CCcccc-ceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHh-hcCCCCccceeeEEee----CCe
Q 008055 271 GSFNVE-NLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNIS-QLHHPNIMELVGYCSE----YGQ 343 (579)
Q Consensus 271 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~----~~~ 343 (579)
++|.+. +.||+|+||.||++... +++.||||++.. ...+.+|+.++. ..+||||+++++++.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 356665 78999999999999765 689999999963 235667777764 4589999999998865 567
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCceEEecc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---ELNPQLSDC 420 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---~~~~kl~Df 420 (579)
.++||||+++|+|.+++... ....+++..+..|+.||+.||+|||++ +|+||||||+|||++. ++.+||+||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 89999999999999999732 234689999999999999999999976 9999999999999997 789999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhccccccChhH
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLHDIDA 499 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 499 (579)
|+++............+|..|+|||++.+..++.++|||||||++|||++|+.||........ .... ..
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~----------~~ 278 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----------TR 278 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH----------HH
T ss_pred ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH----------HH
Confidence 999876654444556778899999999999999999999999999999999999975432110 0000 00
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
+. ..............+.++.+|+.+||+.||++|||+.++++.
T Consensus 279 i~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 279 IR-MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HH-HTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HH-cCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 000001111113456789999999999999999999999864
No 141
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.4e-42 Score=342.08 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=202.6
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC-CeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY-GQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 348 (579)
.++|++.+.||+|+||.||++... |+.||+|++.... ..+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 457899999999999999999875 8899999997543 357789999999999999999999997544 5789999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 999999999999632 122378899999999999999999976 999999999999999999999999999875543
Q ss_pred CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
. .....++..|+|||++.+..++.++||||||+++|||++ |+.||....... +...+...
T Consensus 170 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-----------------~~~~~~~~ 230 (278)
T 1byg_A 170 T--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------------VVPRVEKG 230 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-----------------HHHHHTTT
T ss_pred c--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHhcC
Confidence 2 223345778999999998999999999999999999998 999997543211 11111122
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHc
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRA 552 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~ 552 (579)
.....+..++..+.+++.+||+.||++|||+.++++.|+++...+
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 231 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 223344556788999999999999999999999999999987543
No 142
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.7e-43 Score=376.07 Aligned_cols=258 Identities=28% Similarity=0.465 Sum_probs=212.9
Q ss_pred HHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 266 LQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 266 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
+++..++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+.++++++||||+++++++.+ +..+
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 3445667899999999999999999998888999999976543 25679999999999999999999999876 6789
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++|+|.++++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 338 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred EeeehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 999999999999999632 234588999999999999999999976 999999999999999999999999999986
Q ss_pred CCCCCc--ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 426 MPNADE--ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 426 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
...... .....++..|+|||++....++.++|||||||++|||++ |+.||....... +..
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-----------------~~~ 475 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----------------VLD 475 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-----------------HHH
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHH
Confidence 643221 112234568999999999999999999999999999999 999997643211 111
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
.+....+...+..++..+.+||.+||+.||++|||+.+|++.|+.+.
T Consensus 476 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 476 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11112222345567788999999999999999999999999998765
No 143
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.3e-42 Score=350.51 Aligned_cols=247 Identities=30% Similarity=0.426 Sum_probs=201.9
Q ss_pred CccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
.|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 488899999999999999976 57899999999765432 3445678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+. |+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 135 ~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 135 YCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp CCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred cCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 997 688888752 235689999999999999999999976 9999999999999999999999999999765432
Q ss_pred CcccccCCCCCccCccccc---cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 430 DEALNNDAGSGYGAPEVAM---SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 430 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
....+++.|+|||++. ...++.++|||||||++|||++|+.||........ +..+...
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----------------~~~~~~~ 268 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------------LYHIAQN 268 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------------HHHHHHS
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----------------HHHHHhc
Confidence 3456788999999985 56789999999999999999999999965432110 0011111
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
......+...+..+.+++.+||+.||++|||+.++++.
T Consensus 269 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 269 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11111223445689999999999999999999999853
No 144
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.4e-41 Score=339.52 Aligned_cols=264 Identities=18% Similarity=0.276 Sum_probs=209.0
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEE-eeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYC-SEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+|+.+++.++|++++..+.++ ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 46899999999999999999986 5789999999865442 24578899999999998877777665 567788999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEecccccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLAS 424 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~~ 424 (579)
|||+ +++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||++.
T Consensus 84 ~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 84 MELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 9999 9999999963 245689999999999999999999976 99999999999999 488899999999997
Q ss_pred cCCCCCc--------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccC
Q 008055 425 NMPNADE--------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHD 496 (579)
Q Consensus 425 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 496 (579)
....... .....++..|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-------- 228 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE-------- 228 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH--------
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhh--------
Confidence 6544322 233457889999999999999999999999999999999999997643211110000
Q ss_pred hhHHhh-hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 497 IDALAK-MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 497 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
.+.. ..... ........+..+.+++.+||+.||++|||+.++++.|+++..+....
T Consensus 229 --~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 229 --RISEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp --HHHHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred --hhcccccCCc-hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 0000 00000 00011234568999999999999999999999999999999877653
No 145
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.9e-42 Score=348.14 Aligned_cols=258 Identities=18% Similarity=0.256 Sum_probs=206.9
Q ss_pred HHHhCCcccc-ceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCe
Q 008055 267 QMATGSFNVE-NLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 267 ~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 343 (579)
+...++|.+. +.||+|+||.||+|... +++.||+|++............+.+|+.++..+ +||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445567777 89999999999999775 689999999987665556678899999999988 56999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCceEEecc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---ELNPQLSDC 420 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---~~~~kl~Df 420 (579)
.++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999852 2345689999999999999999999976 9999999999999998 789999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
|++.............+++.|+|||++....++.++|||||||++|||++|+.||.......... .+
T Consensus 179 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------------~i 245 (327)
T 3lm5_A 179 GMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL-------------NI 245 (327)
T ss_dssp GGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------------HH
T ss_pred ccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH-------------HH
Confidence 99987765554455678889999999999999999999999999999999999997644321110 00
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. .............+..+.+++.+||+.||++|||+.++++
T Consensus 246 ~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 246 SQ-VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HH-TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Hh-cccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00 0111111222345678999999999999999999999985
No 146
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.2e-42 Score=369.86 Aligned_cols=256 Identities=22% Similarity=0.342 Sum_probs=210.5
Q ss_pred HhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
..++|++.+.||+|+||.||+|... +|+.||+|++.+... .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999875 799999999965321 12235668899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||++||+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 262 VmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 99999999999998632 234589999999999999999999976 9999999999999999999999999999887
Q ss_pred CCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
..........+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...+.
T Consensus 337 ~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-------------~~~i~~~i~- 402 (576)
T 2acx_A 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-------------REEVERLVK- 402 (576)
T ss_dssp CTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-------------HHHHHHHHH-
T ss_pred ccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-------------HHHHHHHhh-
Confidence 665555566789999999999998999999999999999999999999976432110 011111110
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCC-----ChHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRP-----PMSEVVQ 543 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 543 (579)
.....++...+.++.+|+.+||+.||++|| ++.|+++
T Consensus 403 ~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 403 EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 111233455667899999999999999999 6778764
No 147
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-41 Score=339.55 Aligned_cols=265 Identities=19% Similarity=0.292 Sum_probs=205.5
Q ss_pred HhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEE-eeCCeEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYC-SEYGQHLL 346 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 346 (579)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ..+.+|+.+++.++|++++..+.++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 346899999999999999999976 57899999987654322 3477899999999998888777766 66778899
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEeccccc
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLA 423 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~ 423 (579)
||||+ +++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEcc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 99999 9999999863 244689999999999999999999976 99999999999999 78899999999999
Q ss_pred ccCCCCCc--------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhhhhccccc
Q 008055 424 SNMPNADE--------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLVRWATPQL 494 (579)
Q Consensus 424 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~ 494 (579)
........ .....++..|+|||++.+..++.++|||||||++|||++|+.||......... .+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--- 232 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE--- 232 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH---
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhc---
Confidence 76644322 12345678999999999999999999999999999999999999764322111 1100000
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
.....+ ........+..+.+++.+||+.||++|||+.++++.|++++++....
T Consensus 233 ------~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 233 ------KKMSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp ------HHHHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred ------ccccch--hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 000000 00001223568999999999999999999999999999999887753
No 148
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=349.23 Aligned_cols=260 Identities=25% Similarity=0.349 Sum_probs=204.9
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe----eCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS----EYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~ 344 (579)
.++|++.+.||+|+||.||++.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. .....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 45799999999999999999986 578999999986532 455678899999999999999999999986 34578
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999999976555567899999999999999999999976 99999999999999999999999999987
Q ss_pred cCCCCCcc----------cccCCCCCccCccccccCC---CCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcc
Q 008055 425 NMPNADEA----------LNNDAGSGYGAPEVAMSGQ---YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 425 ~~~~~~~~----------~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 491 (579)
........ ....++..|+|||++.... ++.++||||||+++|||++|+.||....... ..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~------ 255 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DS------ 255 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SC------
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-ch------
Confidence 55321111 1223578899999987554 6899999999999999999999995311100 00
Q ss_pred ccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHH
Q 008055 492 PQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLV 549 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~ 549 (579)
+............+...+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 256 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 256 --------VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp --------HHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred --------hhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00000001111122345678999999999999999999999999997653
No 149
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.1e-42 Score=376.63 Aligned_cols=250 Identities=25% Similarity=0.434 Sum_probs=206.4
Q ss_pred ceeccCCceEEEEEEeC---CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEEecCC
Q 008055 277 NLLGEGTFGRVYRAQFA---DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKN 353 (579)
Q Consensus 277 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 353 (579)
+.||+|+||.||+|.+. .++.||||+++.........+.+.+|+.++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999998765555667889999999999999999999999964 568899999999
Q ss_pred CChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCCCcc-
Q 008055 354 GSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEA- 432 (579)
Q Consensus 354 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 432 (579)
|+|.+++.. ...+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999962 45689999999999999999999976 9999999999999999999999999999876543321
Q ss_pred ---cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 433 ---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 433 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
....++..|+|||++....++.++|||||||++|||++ |+.||...... .+...+....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----------------~~~~~i~~~~ 589 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----------------EVTAMLEKGE 589 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----------------HHHHHHHTTC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHHHcCC
Confidence 12234567999999999999999999999999999999 99999765432 1112222223
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
....+..++.++.+++.+||+.||++|||+.+|++.|+++..+
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 3344566778999999999999999999999999999988754
No 150
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.7e-42 Score=367.04 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=207.0
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|.+.+.||+|+||.||+|+.+ +|+.||+|++.+.... ......+..|+.++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367899999999999999999875 6999999999653221 23356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||++||+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999975544456799999999999999999999976 99999999999999999999999999998765
Q ss_pred CCCcc-cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NADEA-LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+...
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~------------~~~~~~i~~~ 408 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN------------KELKQRVLEQ 408 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH------------HHHHHHHHHC
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH------------HHHHHHHhhc
Confidence 54332 3347889999999999999999999999999999999999999764321000 0000111111
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCCh
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPM 538 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 538 (579)
...++...+..+.+++.+||+.||++||++
T Consensus 409 --~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 409 --AVTYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp --CCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred --ccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 123445567789999999999999999976
No 151
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.5e-42 Score=347.82 Aligned_cols=259 Identities=22% Similarity=0.356 Sum_probs=198.5
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCC----e
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG----Q 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~ 343 (579)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ......+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 45799999999999999999976 57899999999765433 344567899999999999999999999987654 3
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.++++. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 4999999999999999963 34689999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCc----ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 424 SNMPNADE----ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 424 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
........ .....++..|+|||++.+..++.++|||||||++|||++|+.||.......... ......
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~--~~~~~~------ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY--QHVRED------ 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHCC------
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhcCC------
Confidence 76544322 122346889999999999999999999999999999999999997654321100 000000
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHH-HHHHHHH
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVV-QALVRLV 549 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl-~~L~~i~ 549 (579)
...........+..+.+++.+||+.||++||++.+++ ..|..+.
T Consensus 236 ------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 236 ------PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ------CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ------CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0000000123456899999999999999999766655 4555444
No 152
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.2e-42 Score=346.96 Aligned_cols=265 Identities=23% Similarity=0.359 Sum_probs=210.3
Q ss_pred hCCccccceeccCCceEEEEEEe------CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
.++|++.+.||+|+||.||+|.+ .++..||||++.... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 45799999999999999999974 357789999996443 34456788999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCceEE
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDED---NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---ELNPQL 417 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---~~~~kl 417 (579)
.++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999754322 24588999999999999999999976 9999999999999984 456999
Q ss_pred ecccccccCCCCC---cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcccc
Q 008055 418 SDCGLASNMPNAD---EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 418 ~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
+|||++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----------- 253 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------- 253 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----------
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH-----------
Confidence 9999986442221 1122345678999999999999999999999999999998 999997543211
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
+...+........+..++..+.+++.+||+.||++|||+.++++.|+.+.+.....
T Consensus 254 ------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~~ 309 (327)
T 2yfx_A 254 ------VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309 (327)
T ss_dssp ------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHH
T ss_pred ------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHHh
Confidence 11111111122234456678999999999999999999999999999998766554
No 153
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.1e-42 Score=349.95 Aligned_cols=265 Identities=20% Similarity=0.369 Sum_probs=213.5
Q ss_pred HHHHHhCCccccceeccCCceEEEEEEeC------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEE
Q 008055 265 DLQMATGSFNVENLLGEGTFGRVYRAQFA------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYC 338 (579)
Q Consensus 265 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 338 (579)
++++..++|++.+.||+|+||.||+|.+. +++.||+|++.... .......+.+|+.+++.++||||+++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 33455678999999999999999999764 36789999997543 234456789999999999999999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhcccC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC
Q 008055 339 SEYGQHLLVYEFRKNGSLHDFLHLSD------EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 412 (579)
Q Consensus 339 ~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~ 412 (579)
.+.+..++||||+++|+|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 99999999999999999999986422 1124578999999999999999999976 99999999999999999
Q ss_pred CceEEecccccccCCCCCc---ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhh
Q 008055 413 LNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVR 488 (579)
Q Consensus 413 ~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~ 488 (579)
+.+||+|||++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||........
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----- 249 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----- 249 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH-----
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH-----
Confidence 9999999999875533221 112234668999999999999999999999999999999 8999976432110
Q ss_pred hccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHH
Q 008055 489 WATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQ 550 (579)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~ 550 (579)
...+... .....+..++..+.+++.+||+.||++|||+.++++.|++++.
T Consensus 250 -----------~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 250 -----------LRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -----------HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -----------HHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111111 1112344566789999999999999999999999999987654
No 154
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3e-42 Score=351.75 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=203.8
Q ss_pred HHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHH-HHhhcCCCCccceeeEEeeCCeEE
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVS-NISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
+..++|++.+.||+|+||.||+|.. .+|+.||||++........ ...+..|+. .++.++||||+++++++.+.+..+
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 3456899999999999999999986 4789999999976654433 344444444 478889999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
+||||+++ +|.+++.........+++..++.++.||+.||+|||+. .+|+||||||+|||++.++.+||+|||++..
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999975 99998865444566899999999999999999999963 2899999999999999999999999999976
Q ss_pred CCCCCcccccCCCCCccCccccc----cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 426 MPNADEALNNDAGSGYGAPEVAM----SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
...........++..|+|||++. ...++.++|||||||++|||++|+.||........ .+.
T Consensus 204 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~---------------~~~ 268 (340)
T 3an0_A 204 LVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ---------------QLK 268 (340)
T ss_dssp HSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH---------------HHH
T ss_pred cccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH---------------HHH
Confidence 65433333456888999999964 34689999999999999999999999975332111 111
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+........+...+.++.+++.+||+.||++|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 269 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111111122345678999999999999999999999986
No 155
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-41 Score=338.31 Aligned_cols=258 Identities=23% Similarity=0.345 Sum_probs=205.3
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCc----hhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPS----EMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL 345 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 345 (579)
++|++.+.||+|+||.||+|... +++.||+|+++...... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46899999999999999999876 68999999987654321 23678899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----ceEEeccc
Q 008055 346 LVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL----NPQLSDCG 421 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg 421 (579)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999863 34689999999999999999999976 999999999999998877 89999999
Q ss_pred ccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHh
Q 008055 422 LASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALA 501 (579)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
++.............++..|+|||++....++.++||||||+++|+|++|..||........ ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---------- 225 (283)
T 3bhy_A 158 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET--LTNISA---------- 225 (283)
T ss_dssp TCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHT----------
T ss_pred cceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH--HHHhHh----------
Confidence 99876554444455678899999999989999999999999999999999999976432211 000000
Q ss_pred hhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH--HHHHHH
Q 008055 502 KMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ--ALVRLV 549 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~i~ 549 (579)
.............+..+.+++.+||+.||++|||+.++++ .++.+.
T Consensus 226 --~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 226 --VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp --TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred --cccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0000000001233467899999999999999999999997 444443
No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.2e-42 Score=350.62 Aligned_cols=258 Identities=22% Similarity=0.270 Sum_probs=200.7
Q ss_pred HHHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCC---CCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSA---LPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG 342 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 342 (579)
....++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+.+|+.++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34456799999999999999999976 468899999986432 23345678999999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhcccCCC------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDED------------------------------------NKPLIWNSRVKIALGTARAL 386 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~L 386 (579)
..++||||+++|+|.+++...... ...+++..++.++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998532111 12345677889999999999
Q ss_pred HHHHhcCCCCeEEcCCCCCCEEEcCCC--ceEEecccccccCCCCC-----cccccCCCCCccCcccccc--CCCCccch
Q 008055 387 EYLHEVCSLSVVHKNIKSANILLDNEL--NPQLSDCGLASNMPNAD-----EALNNDAGSGYGAPEVAMS--GQYNIKSD 457 (579)
Q Consensus 387 ~~LH~~~~~~iiH~Dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~--~~~~~~~D 457 (579)
+|||+. +|+||||||+|||++.++ .+||+|||++....... ......+++.|+|||++.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999976 999999999999998776 89999999997543211 1234557889999999975 67899999
Q ss_pred HHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccccCC--CChhhHHHHHHHHHhcCCCCCCCC
Q 008055 458 VYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGL--YPVKSLSRFADVIALCVQPEPEFR 535 (579)
Q Consensus 458 vwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~R 535 (579)
||||||++|||++|+.||........ +..+........ .....+..+.+++.+||+.||++|
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDADT----------------ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHHH----------------HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHC
Confidence 99999999999999999976543211 111111111111 112345689999999999999999
Q ss_pred CChHHHHH
Q 008055 536 PPMSEVVQ 543 (579)
Q Consensus 536 ps~~evl~ 543 (579)
||+.++++
T Consensus 323 ps~~~~l~ 330 (345)
T 3hko_A 323 FDAMRALQ 330 (345)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99999986
No 157
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=350.35 Aligned_cols=255 Identities=18% Similarity=0.241 Sum_probs=206.4
Q ss_pred HhCCccccceeccCCceEEEEEE------eCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC---CCCccceeeEEe
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQ------FADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH---HPNIMELVGYCS 339 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~ 339 (579)
..++|.+.+.||+|+||.||+|. ..+++.||+|++.... ...+..|+..+.+++ |+||+++++++.
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 45679999999999999999993 4568999999997543 456667777776665 999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhcccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-------
Q 008055 340 EYGQHLLVYEFRKNGSLHDFLHLSDE-DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN------- 411 (579)
Q Consensus 340 ~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~------- 411 (579)
..+..++||||+++|+|.++++.... ....+++..++.|+.|++.||+|||++ +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999975333 345799999999999999999999965 9999999999999998
Q ss_pred ----CCceEEecccccccCC---CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh
Q 008055 412 ----ELNPQLSDCGLASNMP---NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ 484 (579)
Q Consensus 412 ----~~~~kl~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~ 484 (579)
++.+||+|||+++... .........+|..|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-- 292 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-- 292 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--
Confidence 8999999999996442 2333445668899999999999999999999999999999999999995422110
Q ss_pred hhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCC-CChHHHHHHHHHHHHHcc
Q 008055 485 SLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFR-PPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~evl~~L~~i~~~~~ 553 (579)
|. ....+... .....+.+++..|++.+|.+| |+++++.+.|++++.+..
T Consensus 293 ----~~-------------~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 293 ----CK-------------PEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp ----EE-------------ECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ----ee-------------echhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 00 00111110 124578899999999999998 788999999999887643
No 158
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.5e-43 Score=347.24 Aligned_cols=254 Identities=25% Similarity=0.420 Sum_probs=202.1
Q ss_pred hCCccccceeccCCceEEEEEEeCC-C-------cEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFAD-G-------KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY 341 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 341 (579)
.++|.+.+.||+|+||.||+|.... + ..||+|++.... ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 4578899999999999999997653 3 479999986533 34567899999999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-------
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN------- 414 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~------- 414 (579)
+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999973 234489999999999999999999976 9999999999999998887
Q ss_pred -eEEecccccccCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCC-CCCCCCCchhhhhhhhhcc
Q 008055 415 -PQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGR-KPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 415 -~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~-~p~~~~~~~~~~~~~~~~~ 491 (579)
+||+|||++...... ....++..|+|||++.+ ..++.++|||||||++|||++|. +||.............
T Consensus 159 ~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~--- 232 (289)
T 4fvq_A 159 FIKLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE--- 232 (289)
T ss_dssp EEEECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---
T ss_pred eeeeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh---
Confidence 999999998655332 22345778999999987 67899999999999999999955 5554332211110000
Q ss_pred ccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 492 PQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
. ....+...+..+.+++.+||+.||++|||+.++++.|++++....
T Consensus 233 -------------~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 233 -------------D---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp -------------T---TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred -------------c---cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 0 111122234568899999999999999999999999988775433
No 159
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-41 Score=336.25 Aligned_cols=245 Identities=24% Similarity=0.330 Sum_probs=204.2
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... ++..+|+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 46999999999999999999775 577899999865432 235788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEecccccccC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLASNM 426 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~ 426 (579)
|+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999998863 34589999999999999999999976 99999999999999 78899999999999877
Q ss_pred CCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
..........++..|+|||++.+ .++.++||||||+++|||++|+.||.......... .+...
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----------------~~~~~ 222 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML----------------KIREG 222 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----------------HHHHC
T ss_pred cCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH----------------HHHhC
Confidence 66555566678889999998865 48999999999999999999999997644321110 00000
Q ss_pred cccCCCCh----hhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 ALKGLYPV----KSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 ~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ...+. ..+..+.+++.+||+.||++|||+.++++
T Consensus 223 ~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 223 T--FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp C--CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred C--CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01111 23568899999999999999999999985
No 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.2e-42 Score=355.87 Aligned_cols=267 Identities=22% Similarity=0.367 Sum_probs=194.4
Q ss_pred HhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEeeCC--eE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSEYG--QH 344 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~ 344 (579)
..++|++.+.||+|+||.||+|.. .+++.||||++............+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 457899999999999999999976 47899999999766555666778889999999997 999999999997543 78
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++|||||+ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 689998862 4688999999999999999999976 99999999999999999999999999997
Q ss_pred cCCCC----------------------CcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCch
Q 008055 425 NMPNA----------------------DEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPR 481 (579)
Q Consensus 425 ~~~~~----------------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~ 481 (579)
..... .......+|++|+|||++.+ ..++.++|||||||++|||++|++||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 65321 11223457789999999976 67899999999999999999999999765432
Q ss_pred hh-hhhhhh-ccccccC--------hh----HHhhhc---CccccCCC------------ChhhHHHHHHHHHhcCCCCC
Q 008055 482 LE-QSLVRW-ATPQLHD--------ID----ALAKMV---DPALKGLY------------PVKSLSRFADVIALCVQPEP 532 (579)
Q Consensus 482 ~~-~~~~~~-~~~~~~~--------~~----~~~~~~---~~~~~~~~------------~~~~~~~l~~li~~cl~~dP 532 (579)
.. ..+... ..|.... .. .+.... .......+ +..++.++.+|+.+||+.||
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 11 111110 0110000 00 000000 00000000 11345689999999999999
Q ss_pred CCCCChHHHHHH
Q 008055 533 EFRPPMSEVVQA 544 (579)
Q Consensus 533 ~~Rps~~evl~~ 544 (579)
++|||+.|+++-
T Consensus 318 ~~R~t~~e~l~H 329 (388)
T 3oz6_A 318 NKRISANDALKH 329 (388)
T ss_dssp GGSCCHHHHTTS
T ss_pred ccCCCHHHHhCC
Confidence 999999999853
No 161
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.6e-42 Score=365.26 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=196.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCC-CCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSA-LPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... +|+.||||++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 357999999999999999999764 68999999996432 1233456678899999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHE-VCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999863 3468999999999999999999996 5 9999999999999999999999999999764
Q ss_pred CCC-CcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 427 PNA-DEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 427 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
... .......+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----------------~~i~~ 363 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----------------ELILM 363 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHH
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH----------------HHHHh
Confidence 332 2334466788999999999999999999999999999999999999764322110 01110
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCC-----ChHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRP-----PMSEVVQ 543 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 543 (579)
. ...++...+.++.+|+.+||+.||++|| ++.|+++
T Consensus 364 ~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 364 E--EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C--CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 1123445567899999999999999999 9999985
No 162
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-41 Score=361.06 Aligned_cols=264 Identities=18% Similarity=0.226 Sum_probs=198.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC------C
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY------G 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 342 (579)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999764 689999999976654556678889999999999999999999999654 4
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 67999999975 5666663 2388999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcc-cccc---C-
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWAT-PQLH---D- 496 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~~~~---~- 496 (579)
++............+|+.|+|||++.+..++.++|||||||++|||++|+.||.+...... ..+..... |... .
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 9877655445556788999999999999999999999999999999999999976543211 11111100 0000 0
Q ss_pred hhHHhhhcCc---------------cccCCC---ChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 497 IDALAKMVDP---------------ALKGLY---PVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 497 ~~~~~~~~~~---------------~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.......+.. .+.... ......++.+|+.+||..||++|||+.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0001111110 000000 0112567999999999999999999999985
No 163
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1e-41 Score=350.56 Aligned_cols=271 Identities=24% Similarity=0.338 Sum_probs=206.6
Q ss_pred cCHHHHHHHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-----CCCccce
Q 008055 261 YSIADLQMATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-----HPNIMEL 334 (579)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l 334 (579)
+++.+.....++|++.+.||+|+||.||+|.. .+++.||||++... ......+..|+.+++.+. ||||+++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 33344445678999999999999999999987 47899999999642 344566778888888886 9999999
Q ss_pred eeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---
Q 008055 335 VGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN--- 411 (579)
Q Consensus 335 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~--- 411 (579)
++++...+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 99999999999999999 99999999742 234589999999999999999999976 9999999999999975
Q ss_pred ----------------------CCceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHH
Q 008055 412 ----------------------ELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELL 469 (579)
Q Consensus 412 ----------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ell 469 (579)
++.+||+|||++..... ......++..|+|||++.+..++.++|||||||++|||+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 78999999999976543 223456788999999999999999999999999999999
Q ss_pred hCCCCCCCCCchhhhhhhhhccccccChhHHhhhc---------CccccCCC--------------------ChhhHHHH
Q 008055 470 TGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV---------DPALKGLY--------------------PVKSLSRF 520 (579)
Q Consensus 470 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--------------------~~~~~~~l 520 (579)
+|+.||...................... ...... ........ +......+
T Consensus 254 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 254 TGSLLFRTHEHMEHLAMMESIIQPIPKN-MLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHTCCCCHH-HHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HCCCCCCCCcHHHHHHHHHHhcCCCCHH-HHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 9999997654322111111111011100 000000 00000000 01112578
Q ss_pred HHHHHhcCCCCCCCCCChHHHHH
Q 008055 521 ADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 521 ~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+|+.+||+.||++|||+.|+++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCCCHHHHhc
Confidence 89999999999999999999874
No 164
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.4e-42 Score=343.59 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=202.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999875 688999999975432 233457788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999963 24689999999999999999999976 99999999999999999999999999987654
Q ss_pred CCCc--ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 428 NADE--ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 428 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.... .....++..|+|||++.+..++.++||||||+++|||++|+.||........... +....
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-------------~~~~~- 251 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH-------------INQAI- 251 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH-------------HHSCC-
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH-------------hccCC-
Confidence 3321 2234567899999999999999999999999999999999999976432211100 00000
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCC-ChHHHHHHHHHHHHHcc
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRP-PMSEVVQALVRLVQRAN 553 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~i~~~~~ 553 (579)
......+...+..+.+++.+||+.||++|| ++.++++.|++++....
T Consensus 252 -~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 252 -PRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp -CCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred -CCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 000112334556899999999999999999 99999999988775544
No 165
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.3e-42 Score=338.54 Aligned_cols=249 Identities=30% Similarity=0.466 Sum_probs=184.8
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|.. .+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 4689999999999999999976 5789999999864321 1123467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999862 345689999999999999999999976 999999999999999999999999999976643
Q ss_pred CC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 AD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.. ......++..|+|||++.+..++.++||||||+++|||++|+.||....... .........
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~~~~~ 228 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN----------------TLNKVVLAD 228 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSSC
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH----------------HHHHHhhcc
Confidence 22 2233456789999999998889999999999999999999999997543210 000111001
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...+...+.++.+++.+||+.||++|||+.++++
T Consensus 229 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 229 --YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1123445578999999999999999999999985
No 166
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.5e-41 Score=333.15 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=203.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46899999999999999999875 789999999865432 2345788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++++|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999985 345689999999999999999999976 9999999999999999999999999998765322
Q ss_pred C---cccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 430 D---EALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 430 ~---~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
. ......++..|+|||++.+..+ +.++||||||+++|||++|+.||....... .....|..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~-------------- 223 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE-------------- 223 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHHHT--------------
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHhhh--------------
Confidence 2 1223456789999999987775 789999999999999999999997643211 11111111
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...........+..+.+++.+||+.||++|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00000112334568899999999999999999999875
No 167
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-41 Score=355.32 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=191.6
Q ss_pred HhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC------chhHHHHHHHHHHHhhcCCCCccceeeEEeeC
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP------SEMCDDFIEMVSNISQLHHPNIMELVGYCSEY 341 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 341 (579)
..++|.+.+.||+|+||.||+|... +++.||||++...... ......+.+|+.++++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 4678999999999999999999764 6899999998654221 122235789999999999999999999975 4
Q ss_pred CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---ceEEe
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL---NPQLS 418 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~---~~kl~ 418 (579)
+..++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 56899999999999999885 345689999999999999999999976 999999999999997544 59999
Q ss_pred cccccccCCCCCcccccCCCCCccCcccccc---CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcccccc
Q 008055 419 DCGLASNMPNADEALNNDAGSGYGAPEVAMS---GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLH 495 (579)
Q Consensus 419 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 495 (579)
|||+++............+++.|+|||++.. ..++.++|||||||++|+|++|+.||........ +..
T Consensus 285 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~------- 355 (419)
T 3i6u_A 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD------- 355 (419)
T ss_dssp CSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHH-------
T ss_pred ecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHH-------
Confidence 9999987765544455678899999999863 6688999999999999999999999975432100 000
Q ss_pred ChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 496 DIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+.... ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 356 ---~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 ---QITSGK-YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp ---HHHTTC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---HHhcCC-CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 000000 00000001123568899999999999999999999985
No 168
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-41 Score=337.39 Aligned_cols=248 Identities=20% Similarity=0.335 Sum_probs=200.8
Q ss_pred CccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee----CCeEEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE----YGQHLL 346 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 346 (579)
.|.+.+.||+|+||.||+|... ++..||+|++..........+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4778889999999999999764 67899999998766666677889999999999999999999998865 456899
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCEEEc-CCCceEEeccccc
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLS--VVHKNIKSANILLD-NELNPQLSDCGLA 423 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--iiH~Dlkp~Nill~-~~~~~kl~Dfg~~ 423 (579)
||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 9999999999999963 24588999999999999999999976 6 99999999999998 7899999999999
Q ss_pred ccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhh
Q 008055 424 SNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKM 503 (579)
Q Consensus 424 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
...... ......++..|+|||++. +.++.++|||||||++|+|++|+.||......... ....
T Consensus 180 ~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---------------~~~~ 242 (290)
T 1t4h_A 180 TLKRAS-FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---------------YRRV 242 (290)
T ss_dssp GGCCTT-SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---------------HHHH
T ss_pred cccccc-ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH---------------HHHH
Confidence 755432 233456788999999876 56999999999999999999999999754321110 0001
Q ss_pred cCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 504 VDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
........++...+..+.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 243 TSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1100111122233467999999999999999999999985
No 169
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.4e-42 Score=346.35 Aligned_cols=266 Identities=20% Similarity=0.286 Sum_probs=194.3
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||||++............+.+|+.++++++||||+++++++.+.+..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 457999999999999999999754 7899999999876655555677889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-----CCCceEEeccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD-----NELNPQLSDCGLA 423 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~-----~~~~~kl~Dfg~~ 423 (579)
||++ |+|.+++.. ...+++..++.|+.|++.||+|||++ +|+||||||+|||++ .++.+||+|||++
T Consensus 113 e~~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 113 EYAE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp ECCS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred ecCC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9997 599999863 34589999999999999999999976 999999999999994 4556999999999
Q ss_pred ccCCCCC-cccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhh-hccccccCh--
Q 008055 424 SNMPNAD-EALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVR-WATPQLHDI-- 497 (579)
Q Consensus 424 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~-~~~~~~~~~-- 497 (579)
....... ......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ..+.. ...+.....
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence 7654322 22334568899999999874 489999999999999999999999976543211 11111 011100000
Q ss_pred -hHHhhhc-------CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 498 -DALAKMV-------DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 498 -~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.....+. ...+....+...+.++.+|+.+||+.||++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 000000011224568899999999999999999999975
No 170
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-41 Score=347.20 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=199.0
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|..+ +++.||+|++...... ..+|++++.++ +||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 346999999999999999999775 6899999999765422 24577777777 799999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC----CceEEeccccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE----LNPQLSDCGLA 423 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg~~ 423 (579)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||+.++ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 999999999999862 35689999999999999999999976 99999999999998543 35999999999
Q ss_pred ccCCCCC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 424 SNMPNAD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 424 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
....... ......+++.|+|||++.+..++.++|||||||++|||++|..||..........+.. .+..
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----------~i~~ 237 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA----------RIGS 237 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH----------HHHH
T ss_pred ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH----------HHcc
Confidence 8654432 2334567889999999988889999999999999999999999997532211111110 0000
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
....+...+....+..+.+|+.+||+.||++|||+.++++.
T Consensus 238 -~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 238 -GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -CCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -CCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00111112234456789999999999999999999999863
No 171
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.8e-41 Score=361.93 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=203.0
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... ++..||+|++............+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 36999999999999999999875 68899999998766555556788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC---CceEEecccccccC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE---LNPQLSDCGLASNM 426 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfg~~~~~ 426 (579)
|+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.. +.+||+|||++...
T Consensus 117 ~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 117 CYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999998853 34688999999999999999999976 99999999999999764 55999999999877
Q ss_pred CCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhhhhccccccChhHHhhhcC
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 505 (579)
..........+++.|+|||++. ..++.++|||||||++|+|++|..||......... .+.....
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-------------- 254 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY-------------- 254 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--------------
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------
Confidence 6655555667899999999886 57999999999999999999999999765432111 0000000
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH--HHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ--ALVRLV 549 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~i~ 549 (579)
..........+..+.+++.+||+.||++|||+.++++ .+.+..
T Consensus 255 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~ 299 (494)
T 3lij_A 255 -TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC 299 (494)
T ss_dssp -CCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred -CCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence 0000001234567899999999999999999999985 344443
No 172
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.7e-41 Score=344.46 Aligned_cols=266 Identities=19% Similarity=0.297 Sum_probs=201.2
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee--------C
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE--------Y 341 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 341 (579)
++|++.+.||+|+||.||+|.. .+|+.||+|++............+.+|+.+++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4799999999999999999987 578999999997766555556788899999999999999999999876 4
Q ss_pred CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccc
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 421 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 421 (579)
+..++||||+++ +|.+.+. .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 568999999975 7777775 2335689999999999999999999976 99999999999999999999999999
Q ss_pred ccccCCCCC-----cccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhhhhcccc-
Q 008055 422 LASNMPNAD-----EALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLVRWATPQ- 493 (579)
Q Consensus 422 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~- 493 (579)
++....... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||......... .+.......
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 997654221 2233456788999999876 45899999999999999999999999875543211 111111100
Q ss_pred ---ccChhHH--hhhcCccccCCCC--h-----hhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 ---LHDIDAL--AKMVDPALKGLYP--V-----KSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ---~~~~~~~--~~~~~~~~~~~~~--~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
....... ............. . ..+..+.+|+.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000000 0000000000000 0 01356889999999999999999999986
No 173
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-41 Score=344.42 Aligned_cols=266 Identities=22% Similarity=0.339 Sum_probs=203.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 47899999999999999999875 58999999997766555666778899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 105 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 999999988764 244689999999999999999999976 9999999999999999999999999999765433
Q ss_pred C-cccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhccccccChhH-------
Q 008055 430 D-EALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLHDIDA------- 499 (579)
Q Consensus 430 ~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~------- 499 (579)
. ......++..|+|||++.+. .++.++|||||||++|+|++|+.||........ ..+.............
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 2 22345678899999999865 689999999999999999999999976543211 1111111100000000
Q ss_pred HhhhcCccccCCC-----ChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 500 LAKMVDPALKGLY-----PVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 500 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
......+...... ....+..+.+|+.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000001111111 1234578999999999999999999999985
No 174
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.7e-42 Score=351.71 Aligned_cols=261 Identities=20% Similarity=0.194 Sum_probs=196.1
Q ss_pred hCCccccceeccCCceEEEEEEeC----CCcEEEEEEeCCCCCCch---------hHHHHHHHHHHHhhcCCCCccceee
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA----DGKVLAVKKIDSSALPSE---------MCDDFIEMVSNISQLHHPNIMELVG 336 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~ 336 (579)
.++|.+.+.||+|+||.||+|... ++..+|+|++........ ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999875 578899999876532110 1234667888899999999999999
Q ss_pred EEee----CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC
Q 008055 337 YCSE----YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 412 (579)
Q Consensus 337 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~ 412 (579)
++.. ....++||||+ +++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9987 67899999999 99999998632 2789999999999999999999976 99999999999999988
Q ss_pred C--ceEEecccccccCCCCCc--------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh
Q 008055 413 L--NPQLSDCGLASNMPNADE--------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL 482 (579)
Q Consensus 413 ~--~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~ 482 (579)
+ .+||+|||+++....... .....++..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 999999999976543221 133467889999999999999999999999999999999999995421111
Q ss_pred --hhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHH
Q 008055 483 --EQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVR 547 (579)
Q Consensus 483 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 547 (579)
.........+.... .+.... .....+.++.+++.+||+.||++|||+.+|++.|++
T Consensus 268 ~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 268 VAVQTAKTNLLDELPQ--SVLKWA-------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHHHHHHHTTTH--HHHHHS-------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHHHHHHHhhcccccH--HHHhhc-------cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11110000000000 000000 011345689999999999999999999999999864
No 175
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.7e-42 Score=340.58 Aligned_cols=259 Identities=25% Similarity=0.407 Sum_probs=199.7
Q ss_pred hCCccccceeccCCceEEEEEEeC--CCc--EEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA--DGK--VLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
.++|++.+.||+|+||.||+|.+. +++ .||+|+++.... .....+.+.+|+.+++.++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 347899999999999999999753 333 689999876543 2355678999999999999999999999998754 8
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 9999999999999998632 34588999999999999999999976 99999999999999999999999999998
Q ss_pred cCCCCCcc----cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 425 NMPNADEA----LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 425 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
........ ....++..|+|||++.+..++.++||||||+++|+|++ |+.||....... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----------------~ 233 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----------------I 233 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----------------H
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH----------------H
Confidence 76543322 12334557999999998889999999999999999999 999997643221 1
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQR 551 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~ 551 (579)
+..+.........+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1111111122223445667899999999999999999999999999887643
No 176
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=9.7e-42 Score=337.88 Aligned_cols=249 Identities=25% Similarity=0.390 Sum_probs=202.3
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... ++..||+|++...... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457999999999999999999765 5779999998543211 12346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999863 24588999999999999999999965 99999999999999999999999999986543
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.. ......++..|+|||++.+..++.++||||||+++|+|++|..||......... ..+..
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------------~~~~~----- 221 (279)
T 3fdn_A 161 SS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY-------------KRISR----- 221 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-------------HHHHH-----
T ss_pred cc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH-------------HHHHh-----
Confidence 32 233456788999999999999999999999999999999999999764322110 01110
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1122344456789999999999999999999999975
No 177
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-41 Score=350.23 Aligned_cols=273 Identities=21% Similarity=0.319 Sum_probs=205.3
Q ss_pred HHHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC----
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY---- 341 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 341 (579)
+...++|++.+.||+|+||.||+|.. .+|+.||||++...... ..+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 45567899999999999999999976 57899999998654321 23689999999999999999998443
Q ss_pred ----------------------------------CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Q 008055 342 ----------------------------------GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALE 387 (579)
Q Consensus 342 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~ 387 (579)
...++||||++ |+|.+.+.........+++..+..++.|++.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34889999997 5888887654455678999999999999999999
Q ss_pred HHHhcCCCCeEEcCCCCCCEEEc-CCCceEEecccccccCCCCCcccccCCCCCccCccccccC-CCCccchHHhHHHHH
Q 008055 388 YLHEVCSLSVVHKNIKSANILLD-NELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVM 465 (579)
Q Consensus 388 ~LH~~~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l 465 (579)
|||+. +|+||||||+|||++ .++.+||+|||+++............++..|+|||++.+. .++.++|||||||++
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99965 999999999999998 6889999999999877666666667778899999998765 489999999999999
Q ss_pred HHHHhCCCCCCCCCchh-hhhhhhh-ccccccChhHHhh---------hcCccccCCCChhhHHHHHHHHHhcCCCCCCC
Q 008055 466 LELLTGRKPFDSSRPRL-EQSLVRW-ATPQLHDIDALAK---------MVDPALKGLYPVKSLSRFADVIALCVQPEPEF 534 (579)
Q Consensus 466 ~elltg~~p~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 534 (579)
|||++|+.||....... ...+... ..|.......... .........++...+..+.+|+.+||+.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 99999999998654321 1111111 1111000000000 00000111133445678999999999999999
Q ss_pred CCChHHHHH--HHHHHH
Q 008055 535 RPPMSEVVQ--ALVRLV 549 (579)
Q Consensus 535 Rps~~evl~--~L~~i~ 549 (579)
|||+.|+++ .+.++.
T Consensus 313 R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 313 RINPYEAMAHPFFDHLR 329 (383)
T ss_dssp SCCHHHHHTSGGGHHHH
T ss_pred CCCHHHHhcCHHHHHHH
Confidence 999999983 344443
No 178
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.6e-41 Score=337.15 Aligned_cols=249 Identities=25% Similarity=0.397 Sum_probs=207.2
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
+.|++.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 46889999999999999999764 689999999976543 3446789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999985 34689999999999999999999976 9999999999999999999999999999765443
Q ss_pred Cc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 430 DE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 430 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
.. .....++..|+|||++.+..++.++||||||+++|+|++|+.||.......... .+.. ..
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------------~~~~----~~ 235 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-------------LIPK----NN 235 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------------HHHH----SC
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-------------Hhhc----CC
Confidence 32 233456788999999999999999999999999999999999997643221110 0111 11
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 545 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 545 (579)
....+...+..+.+++.+||+.||++|||+.++++..
T Consensus 236 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 1122334556899999999999999999999998753
No 179
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.1e-41 Score=343.00 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=179.3
Q ss_pred cceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEeeCCeEEEEEEecCC
Q 008055 276 ENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSEYGQHLLVYEFRKN 353 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 353 (579)
.+.||+|+||.||+|... +++.||||++.. .....+.+|+..+..+. ||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK-----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG-----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh-----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 378999999999999875 689999999954 23567788999999996 99999999999999999999999999
Q ss_pred CChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---ceEEecccccccCCCCC
Q 008055 354 GSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL---NPQLSDCGLASNMPNAD 430 (579)
Q Consensus 354 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~ 430 (579)
|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++......
T Consensus 91 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 91 GELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp CBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999999963 35689999999999999999999976 999999999999998765 89999999998654433
Q ss_pred c-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcccc
Q 008055 431 E-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALK 509 (579)
Q Consensus 431 ~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (579)
. .....++..|+|||++.+..++.++|||||||++|||++|+.||......... ......+..+......
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---------~~~~~~~~~i~~~~~~ 234 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC---------TSAVEIMKKIKKGDFS 234 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C---------CCHHHHHHHHTTTCCC
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc---------ccHHHHHHHHHcCCCC
Confidence 2 23445688999999999999999999999999999999999999754321100 0000111111111111
Q ss_pred CC--CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 510 GL--YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 510 ~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. .....+.++.+|+.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00 01234578999999999999999999999874
No 180
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=350.32 Aligned_cols=265 Identities=22% Similarity=0.346 Sum_probs=204.4
Q ss_pred HHHHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 264 ADLQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 264 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
.+..+..++|++.+.||+|+||.||+|...+ .+|+|++..........+.+.+|+.++++++||||+++++++.+.+.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3344456789999999999999999998754 49999997665444455667889999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||++
T Consensus 104 ~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp EEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred eEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCc
Confidence 9999999999999999963 345689999999999999999999976 999999999999998 679999999997
Q ss_pred ccCCCC------CcccccCCCCCccCcccccc---------CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhh
Q 008055 424 SNMPNA------DEALNNDAGSGYGAPEVAMS---------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVR 488 (579)
Q Consensus 424 ~~~~~~------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~ 488 (579)
...... .......++..|+|||++.. ..++.++|||||||++|||++|+.||..........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--- 253 (319)
T 2y4i_B 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--- 253 (319)
T ss_dssp C----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH---
T ss_pred cccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---
Confidence 654321 11223346778999999874 357889999999999999999999997644321100
Q ss_pred hccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 489 WATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
.+.....+. ..+...+..+.+++.+||+.||++|||+.++++.|+++.++..
T Consensus 254 ----------~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 254 ----------QMGTGMKPN---LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp ----------HHHTTCCCC---CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred ----------HhccCCCCC---CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 000101111 1112344578999999999999999999999999998886544
No 181
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-41 Score=360.53 Aligned_cols=193 Identities=21% Similarity=0.400 Sum_probs=155.9
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee-----CCeE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE-----YGQH 344 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~ 344 (579)
++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57999999999999999999765 78999999997765555667889999999999999999999999843 3578
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
|+||||+ +|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~-~~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 579999886 345689999999999999999999976 99999999999999999999999999998
Q ss_pred cCCCCC----------------------------cccccCCCCCccCcccc-ccCCCCccchHHhHHHHHHHHHhC
Q 008055 425 NMPNAD----------------------------EALNNDAGSGYGAPEVA-MSGQYNIKSDVYSFGVVMLELLTG 471 (579)
Q Consensus 425 ~~~~~~----------------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGv~l~elltg 471 (579)
...... ......+|++|+|||++ ....++.++|||||||++|||++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 654221 12234568899999986 456799999999999999999993
No 182
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.5e-41 Score=349.42 Aligned_cols=266 Identities=21% Similarity=0.347 Sum_probs=206.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 357999999999999999999775 68999999997653 3455678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||++.....
T Consensus 111 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999963 23588999999999999999999963 2899999999999999999999999999865422
Q ss_pred CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhc------------------
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWA------------------ 490 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~------------------ 490 (579)
.......++..|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 185 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 185 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp -HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred -ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 1223346788999999999999999999999999999999999999765432211111000
Q ss_pred --------cccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 491 --------TPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 491 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+.......+................+..+.+|+.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000111111111111112334678999999999999999999999985
No 183
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.9e-41 Score=345.88 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=206.1
Q ss_pred HHHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC--c----hhHHHHHHHHHHHhhc-CCCCccceeeEE
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP--S----EMCDDFIEMVSNISQL-HHPNIMELVGYC 338 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 338 (579)
....++|++.+.||+|+||.||+|... +|+.||||++...... . ...+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344567999999999999999999875 7999999998654321 1 2245678899999998 899999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEe
Q 008055 339 SEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLS 418 (579)
Q Consensus 339 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~ 418 (579)
...+..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999863 34689999999999999999999976 99999999999999999999999
Q ss_pred cccccccCCCCCcccccCCCCCccCcccccc------CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccc
Q 008055 419 DCGLASNMPNADEALNNDAGSGYGAPEVAMS------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP 492 (579)
Q Consensus 419 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 492 (579)
|||++.............+++.|+|||++.+ ..++.++|||||||++|||++|..||..........
T Consensus 243 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~------- 315 (365)
T 2y7j_A 243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR------- 315 (365)
T ss_dssp CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------
T ss_pred ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHH-------
Confidence 9999987766555556678889999999863 358899999999999999999999997643211100
Q ss_pred cccChhHHhhhcCccccCCC--ChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 493 QLHDIDALAKMVDPALKGLY--PVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+......... ....+..+.+++.+||+.||++|||+.++++
T Consensus 316 ---------~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 316 ---------MIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---------HHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---------HHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00000000000 0123457899999999999999999999985
No 184
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.8e-42 Score=349.60 Aligned_cols=263 Identities=19% Similarity=0.245 Sum_probs=206.5
Q ss_pred CCccccceeccCCceEEEEEEeCC---------CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccc--------
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFAD---------GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIME-------- 333 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-------- 333 (579)
++|++.+.||+|+||.||+|.... ++.||+|++... ..+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 579999999999999999998763 789999998653 35778999999999999998
Q ss_pred -------eeeEEee-CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCC
Q 008055 334 -------LVGYCSE-YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSA 405 (579)
Q Consensus 334 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~ 405 (579)
+++++.. .+..++||||+ +|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5677765 78899999999 99999999732 135689999999999999999999976 9999999999
Q ss_pred CEEEcCCC--ceEEecccccccCCCCCc--------ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCC
Q 008055 406 NILLDNEL--NPQLSDCGLASNMPNADE--------ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPF 475 (579)
Q Consensus 406 Nill~~~~--~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~ 475 (579)
|||++.++ .+||+|||+++....... .....++..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 899999999976543221 12236778999999999989999999999999999999999999
Q ss_pred CCCCchhhhhhhhhccccccChhHHhhhcCccccC--CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 476 DSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKG--LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
......... +.... ....... ..+.. ......+..+.+++.+||+.||++|||+.++++.|++++++..
T Consensus 269 ~~~~~~~~~-~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 269 TNCLPNTED-IMKQK-------QKFVDKP-GPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GGGTTCHHH-HHHHH-------HHHHHSC-CCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccCCcCHHH-HHHHH-------HhccCCh-hhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 754311111 10000 0000000 00000 0012335789999999999999999999999999999998876
Q ss_pred cc
Q 008055 554 MS 555 (579)
Q Consensus 554 ~~ 555 (579)
..
T Consensus 340 ~~ 341 (352)
T 2jii_A 340 VS 341 (352)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 185
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.9e-41 Score=340.81 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=196.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC------chhHHHHHHHHHHHhhcCCCCccceeeEEeeCC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP------SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 342 (579)
.++|.+.+.||+|+||.||+|... +++.||||++...... ......+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999765 6889999999764321 122345789999999999999999999987654
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---eEEec
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN---PQLSD 419 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~---~kl~D 419 (579)
.++||||+++|+|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999885 345689999999999999999999976 9999999999999987654 99999
Q ss_pred ccccccCCCCCcccccCCCCCccCccccc---cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccC
Q 008055 420 CGLASNMPNADEALNNDAGSGYGAPEVAM---SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHD 496 (579)
Q Consensus 420 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 496 (579)
||++.............++..|+|||++. ...++.++|||||||++|+|++|..||........ +..
T Consensus 161 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~-------- 230 (322)
T 2ycf_A 161 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD-------- 230 (322)
T ss_dssp CTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHH--------
T ss_pred CccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHH--------
Confidence 99998765543333456788999999974 46789999999999999999999999975432110 000
Q ss_pred hhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 497 IDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+.... ...........+..+.+++.+||+.||++|||+.++++
T Consensus 231 --~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 --QITSGK-YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --HHHHTC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHHhCc-cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 000000 00000001223568899999999999999999999983
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.8e-41 Score=362.73 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=203.1
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||||++............+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 46999999999999999999875 78999999986543333346788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc---CCCceEEecccccccC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD---NELNPQLSDCGLASNM 426 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~~~~~ 426 (579)
|+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||++...
T Consensus 102 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 102 LYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999998863 34689999999999999999999976 999999999999995 4567999999999877
Q ss_pred CCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 427 PNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
..........+++.|+|||++.+ .++.++|||||||++|+|++|+.||......... ..+...
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~~i~~~ 237 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----------------KRVETG 237 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHT
T ss_pred CCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHhC
Confidence 65555556678889999999865 5999999999999999999999999764432110 000000
Q ss_pred cccC--CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKG--LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
.... ......+..+.+++.+||+.||++|||+.++++.
T Consensus 238 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0112345688999999999999999999999863
No 187
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=344.83 Aligned_cols=259 Identities=27% Similarity=0.419 Sum_probs=192.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEe--------
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCS-------- 339 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-------- 339 (579)
..+|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+..+.++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 347899999999999999999864 78999999985442 445677889999999995 999999999983
Q ss_pred eCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCEEEcCCCceEE
Q 008055 340 EYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLS--VVHKNIKSANILLDNELNPQL 417 (579)
Q Consensus 340 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--iiH~Dlkp~Nill~~~~~~kl 417 (579)
.....++||||+. |+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred CCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3445799999995 79999886422 244689999999999999999999976 7 999999999999999999999
Q ss_pred ecccccccCCCCCcc-------------cccCCCCCccCcccc---ccCCCCccchHHhHHHHHHHHHhCCCCCCCCCch
Q 008055 418 SDCGLASNMPNADEA-------------LNNDAGSGYGAPEVA---MSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPR 481 (579)
Q Consensus 418 ~Dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~---~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~ 481 (579)
+|||++......... ....++..|+|||++ ....++.++|||||||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999766443221 133467789999998 5667899999999999999999999999643211
Q ss_pred hhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcccc
Q 008055 482 LEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMS 555 (579)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~~ 555 (579)
...........+...+..+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus 260 --------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 260 --------------------RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp --------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred --------------------HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 000111111112223346889999999999999999999999999998766543
No 188
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.5e-41 Score=363.28 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=207.4
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|... +++.||||++...... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46999999999999999999875 7899999999765433 345678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~~~ 425 (579)
||+.+|+|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||++..
T Consensus 106 e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 106 EVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp CCCCSCBHHHHHH----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred ecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 9999999999886 245689999999999999999999976 99999999999999 5678999999999987
Q ss_pred CCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
...........+++.|+|||++.+ .++.++|||||||++|+|++|+.||......... ..+..
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~~i~~ 241 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL----------------KKVEK 241 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHH
T ss_pred cccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH----------------HHHHc
Confidence 766555556678899999999865 6999999999999999999999999765432111 01100
Q ss_pred ccccC--CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 506 PALKG--LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 506 ~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..... ......+..+.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 242 GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00000 011234578999999999999999999999985
No 189
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5e-41 Score=360.88 Aligned_cols=250 Identities=26% Similarity=0.317 Sum_probs=202.3
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCc-----------hhHHHHHHHHHHHhhcCCCCccceeeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPS-----------EMCDDFIEMVSNISQLHHPNIMELVGY 337 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l~~~ 337 (579)
.++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 457999999999999999999875 57899999997654321 345778899999999999999999999
Q ss_pred EeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---c
Q 008055 338 CSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL---N 414 (579)
Q Consensus 338 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~---~ 414 (579)
+.+.+..++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999998863 34589999999999999999999976 999999999999998776 6
Q ss_pred eEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 415 PQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 415 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
+||+|||++.............+++.|+|||++. ..++.++|||||||++|+|++|..||..........
T Consensus 188 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--------- 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK--------- 257 (504)
T ss_dssp EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------
T ss_pred EEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---------
Confidence 9999999998776655556677899999999986 569999999999999999999999997654321110
Q ss_pred cChhHHhhhcCccccCC--CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 495 HDIDALAKMVDPALKGL--YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+........ .....+.++.+++.+||+.||.+|||+.|+++
T Consensus 258 -------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 258 -------KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -------HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000000 00123467999999999999999999999985
No 190
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.6e-41 Score=340.22 Aligned_cols=258 Identities=17% Similarity=0.289 Sum_probs=202.1
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEee--CCeEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSE--YGQHLL 346 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~l 346 (579)
++|++.+.||+|+||.||+|.. .+++.||+|++.... .+.+.+|+.++++++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5799999999999999999976 578999999996432 567889999999997 9999999999987 677899
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC-ceEEeccccccc
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL-NPQLSDCGLASN 425 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~~~~ 425 (579)
||||+++++|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 999999999999874 278899999999999999999976 999999999999999776 899999999987
Q ss_pred CCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhh--hhhhccc-c--------
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS--LVRWATP-Q-------- 493 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~--~~~~~~~-~-------- 493 (579)
...........++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... +.....+ .
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 766555556677889999999977 678999999999999999999999996543321110 0000000 0
Q ss_pred -ccChhHHhhhcCc--------cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 -LHDIDALAKMVDP--------ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 -~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
............. ......+...+.++.+|+.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000000 0011122335678999999999999999999999985
No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-41 Score=345.67 Aligned_cols=263 Identities=19% Similarity=0.302 Sum_probs=199.3
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC------C
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY------G 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 342 (579)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35799999999999999999977 4789999999976655556677889999999999999999999999765 3
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 8899999863 4588999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhc-ccc------
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWA-TPQ------ 493 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~-~~~------ 493 (579)
++.... ......+|..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.... .+.
T Consensus 175 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 175 ARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred cccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 987543 2334567889999999887 6799999999999999999999999976543211 1111110 000
Q ss_pred ccCh--hHHhhhcCcccc---CCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 LHDI--DALAKMVDPALK---GLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~--~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+... ......+..... .......+..+.+|+.+||..||++|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 000000000000 0112344678999999999999999999999986
No 192
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-41 Score=335.67 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=207.1
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|.+.+.||+|+||.||++... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 47889999999999999999876 578999999865432 3445677889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 95 ELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp ECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999998863 34689999999999999999999976 999999999999999999999999999976643
Q ss_pred CC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCcc
Q 008055 429 AD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPA 507 (579)
Q Consensus 429 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.. ......++..|+|||++.+..++.++||||||+++|+|++|+.||........ .......
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----------------~~~~~~~- 230 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----------------YLRIKKN- 230 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHHHTT-
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHhhc-
Confidence 22 23334577899999999988899999999999999999999999976432211 0111111
Q ss_pred ccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 508 LKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 508 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
....+...+..+.+++.+||+.||++|||+.++++.
T Consensus 231 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 231 -EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 112234455789999999999999999999999874
No 193
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.6e-41 Score=344.63 Aligned_cols=265 Identities=18% Similarity=0.241 Sum_probs=195.9
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC------
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG------ 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 342 (579)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357999999999999999999764 6899999999876555566778899999999999999999999997654
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
..++||||++ |+|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 7899999996 57888774 2478999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcc-c------cc
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWAT-P------QL 494 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~------~~ 494 (579)
++............++..|+|||++.+..++.++|||||||++|||++|+.||........ ..+..... + .+
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 9876544334455678899999999999999999999999999999999999976543211 11110000 0 00
Q ss_pred cC-h------------hHHhhhcCccccCC---CChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 495 HD-I------------DALAKMVDPALKGL---YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 495 ~~-~------------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
.. . .............. .+...+..+.+|+.+||..||++|||+.|+++-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 0 00000000000000 012236789999999999999999999999863
No 194
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.9e-41 Score=348.85 Aligned_cols=275 Identities=21% Similarity=0.323 Sum_probs=203.3
Q ss_pred CHHHHHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCC---------chhHHHHHHHHHHHhhcCCCCcc
Q 008055 262 SIADLQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALP---------SEMCDDFIEMVSNISQLHHPNIM 332 (579)
Q Consensus 262 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv 332 (579)
.+.++....++|.+.+.||+|+||.||+|...+|+.||||++...... ....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456788889999999999999999999999888999999998653322 12247889999999999999999
Q ss_pred ceeeEEee-----CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCE
Q 008055 333 ELVGYCSE-----YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANI 407 (579)
Q Consensus 333 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Ni 407 (579)
++++++.. ....++||||++ |+|.+++. .....+++..+..++.|++.||.|||++ +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH---DQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999843 346899999997 68888886 3345789999999999999999999976 999999999999
Q ss_pred EEcCCCceEEecccccccCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchh-hhh
Q 008055 408 LLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL-EQS 485 (579)
Q Consensus 408 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~-~~~ 485 (579)
|++.++.+||+|||++.............++..|+|||++.+ ..++.++|||||||++|+|++|+.||....... ...
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp EECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999976555444445567889999999876 678999999999999999999999997654321 111
Q ss_pred hhhhcc-ccccC-----hhHHhhhcCccccC-------CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 486 LVRWAT-PQLHD-----IDALAKMVDPALKG-------LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 486 ~~~~~~-~~~~~-----~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+..... +.... .............. ......+..+.+|+.+||+.||++|||+.|+++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 111111 00000 00011111111100 011233567999999999999999999999985
No 195
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.1e-41 Score=342.52 Aligned_cols=250 Identities=23% Similarity=0.342 Sum_probs=207.3
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
..+|.+.+.||+|+||.||++... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 347889999999999999999875 578999999865432 344567788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999998863 34689999999999999999999976 99999999999999999999999999998664
Q ss_pred CCC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NAD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
... ......++..|+|||++.+..++.++||||||+++|||++|+.||.......... .+.. .
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------------~~~~---~ 256 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-------------RIKK---N 256 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-------------HHHH---T
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH-------------HHhc---C
Confidence 322 2334557889999999999999999999999999999999999997643221100 0000 0
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
....+...+..+.+++.+||+.||++|||+.++++.
T Consensus 257 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 257 --EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011233455688999999999999999999999864
No 196
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4e-41 Score=332.77 Aligned_cols=250 Identities=24% Similarity=0.403 Sum_probs=198.2
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|.+.+.||+|+||.||+|... +++.||+|++..... .......+.+|+..++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999876 789999999864321 123356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999863 24588999999999999999999987 99999999999999999999999999998766
Q ss_pred CCCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.........++..|+|||.+.+..+ +.++||||||+++|+|++|+.||......... ..+..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-------------~~~~~---- 225 (276)
T 2h6d_A 163 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF-------------KKIRG---- 225 (276)
T ss_dssp C-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------------HHHHH----
T ss_pred CCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH-------------HHhhc----
Confidence 5444445567889999999987765 68999999999999999999999764321100 00000
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
.....+...+..+.+++.+||+.||++|||+.++++.
T Consensus 226 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 226 -GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -CcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0111234455789999999999999999999999863
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-41 Score=342.88 Aligned_cols=269 Identities=23% Similarity=0.336 Sum_probs=198.2
Q ss_pred HhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC---chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP---SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 344 (579)
..++|++.+.||+|+||.||+|... +|+.||||++...... ......+.+|+.+++.++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4568999999999999999999875 6899999999754322 12235678999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++ +|.+++. .....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIK---DNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHT---TCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHH---hcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999975 8888886 2345688899999999999999999976 99999999999999999999999999998
Q ss_pred cCCCCC-cccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhh-hcccccc---Ch
Q 008055 425 NMPNAD-EALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVR-WATPQLH---DI 497 (579)
Q Consensus 425 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~-~~~~~~~---~~ 497 (579)
...... ......++..|+|||++.+. .++.++|||||||++|||++|.+||........ ..+.. ...+... +.
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 764332 23345678899999999754 489999999999999999999999976543211 11111 1111100 00
Q ss_pred hHHhhhcCccccCCCC-----hhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 498 DALAKMVDPALKGLYP-----VKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
....+..........+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000000000011 2345789999999999999999999999864
No 198
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-40 Score=353.48 Aligned_cols=264 Identities=18% Similarity=0.267 Sum_probs=207.1
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCC-CCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHH-PNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ..+..|+++++.++| +++..+..++...+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 46799999999999999999986 57899999998654432 347788999999977 4555566666778899999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEecccccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLAS 424 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~~ 424 (579)
|||+ +++|.+++.. ....+++..++.|+.||+.||+|||++ +|+||||||+|||| +.++.+||+|||+++
T Consensus 82 me~~-g~sL~~ll~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EECC-CCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 9999 9999999963 245689999999999999999999976 99999999999999 688999999999998
Q ss_pred cCCCCCcc--------cccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccC
Q 008055 425 NMPNADEA--------LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHD 496 (579)
Q Consensus 425 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 496 (579)
........ ....++..|+|||++.+..++.++|||||||++|||++|+.||................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~----- 229 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS----- 229 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH-----
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh-----
Confidence 66543321 14567889999999999999999999999999999999999997654321111111000
Q ss_pred hhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccc
Q 008055 497 IDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANM 554 (579)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~~ 554 (579)
...+.... .. ....++.++.+++.+||+.+|++||++.+|++.|++++.+...
T Consensus 230 ~~~~~~~~-~~----l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~ 282 (483)
T 3sv0_A 230 EKKVATSI-EA----LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF 282 (483)
T ss_dssp HHHHHSCH-HH----HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hccccccH-HH----HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC
Confidence 00000000 00 0123356899999999999999999999999999999886643
No 199
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=343.27 Aligned_cols=265 Identities=22% Similarity=0.303 Sum_probs=196.0
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 47899999999999999999875 7899999999654321 112234578999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CCS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 997 589988863 345689999999999999999999976 9999999999999999999999999999765433
Q ss_pred Cc-ccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcc-c------cccChhH
Q 008055 430 DE-ALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWAT-P------QLHDIDA 499 (579)
Q Consensus 430 ~~-~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~------~~~~~~~ 499 (579)
.. .....++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+..... + .......
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 22 223456889999999876 5689999999999999999999999977543221 11111111 0 0000011
Q ss_pred HhhhcCccccCC----CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 500 LAKMVDPALKGL----YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 500 ~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
......+..... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 111111110000 01234567899999999999999999999986
No 200
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.5e-41 Score=334.12 Aligned_cols=267 Identities=23% Similarity=0.339 Sum_probs=200.9
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999875 78999999997655444455788899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+. |+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 6999998642 234588999999999999999999976 9999999999999999999999999998765432
Q ss_pred C-cccccCCCCCccCccccccCC-CCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhh-ccccccChhHHhhh--
Q 008055 430 D-EALNNDAGSGYGAPEVAMSGQ-YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRW-ATPQLHDIDALAKM-- 503 (579)
Q Consensus 430 ~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-- 503 (579)
. ......++..|+|||++.+.. ++.++|||||||++|+|++|+.||........ ..+... ..+...........
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 2 223345678999999998765 79999999999999999999999976543211 111111 00000000000000
Q ss_pred cCccccC----C---CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 504 VDPALKG----L---YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 504 ~~~~~~~----~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+.... . .....+.++.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0 01224568899999999999999999999985
No 201
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.5e-41 Score=338.25 Aligned_cols=252 Identities=21% Similarity=0.339 Sum_probs=204.5
Q ss_pred HhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC--CCCccceeeEEeeCCeEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH--HPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~l 346 (579)
..++|++.+.||+|+||.||++...+++.||+|++..........+.+.+|+.++.+++ ||||+++++++.+.+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34579999999999999999999888999999999876666667788999999999997 5999999999999999999
Q ss_pred EEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 347 VYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||| +.+++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||+++ +.+||+|||++...
T Consensus 106 v~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999 568899999963 34688999999999999999999976 9999999999999975 89999999999765
Q ss_pred CCCCc---ccccCCCCCccCcccccc-----------CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccc
Q 008055 427 PNADE---ALNNDAGSGYGAPEVAMS-----------GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP 492 (579)
Q Consensus 427 ~~~~~---~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 492 (579)
..... .....++..|+|||++.. ..++.++|||||||++|||++|+.||......
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----------- 245 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----------- 245 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----------
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----------
Confidence 43322 123456889999999875 46888999999999999999999999654321
Q ss_pred cccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 493 QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...+....++.....++...+..+.+++.+||+.||++|||+.++++.
T Consensus 246 ----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 246 ----ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ----HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----HHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 112233333433344455556789999999999999999999999864
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.1e-42 Score=355.75 Aligned_cols=250 Identities=14% Similarity=0.169 Sum_probs=193.3
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCC-CchhHHHHHHHH---HHHhhcCCCCcccee-------eEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSAL-PSEMCDDFIEMV---SNISQLHHPNIMELV-------GYC 338 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~ 338 (579)
++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+ +.++.++||||++++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4688899999999999999986 5699999999975432 334567888999 556666899999998 665
Q ss_pred eeCC-----------------eEEEEEEecCCCChhhhhcccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 008055 339 SEYG-----------------QHLLVYEFRKNGSLHDFLHLSDE---DNKPLIWNSRVKIALGTARALEYLHEVCSLSVV 398 (579)
Q Consensus 339 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ii 398 (579)
.+.+ ..++||||+ +|+|.+++..... ....+++..++.|+.||+.||+|||++ +|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 228 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 228 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 5543 278999999 6899999964321 122455688889999999999999976 999
Q ss_pred EcCCCCCCEEEcCCCceEEecccccccCCCCCcccccCCCCCccCccccccC-----------CCCccchHHhHHHHHHH
Q 008055 399 HKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSG-----------QYNIKSDVYSFGVVMLE 467 (579)
Q Consensus 399 H~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslGv~l~e 467 (579)
||||||+|||++.++.+||+|||+++.... ......+ ..|+|||++.+. .++.++|||||||++||
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999999986433 2333455 899999999887 89999999999999999
Q ss_pred HHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH--HH
Q 008055 468 LLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ--AL 545 (579)
Q Consensus 468 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L 545 (579)
|++|+.||........ ...... .....+..+.+++.+||+.||++|||+.++++ .+
T Consensus 306 lltg~~Pf~~~~~~~~----------------~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 306 IWCADLPITKDAALGG----------------SEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp HHHSSCCC------CC----------------SGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred HHHCCCCCcccccccc----------------hhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 9999999965332100 000000 01233468999999999999999999999985 44
Q ss_pred HHHH
Q 008055 546 VRLV 549 (579)
Q Consensus 546 ~~i~ 549 (579)
+++.
T Consensus 364 ~~~~ 367 (377)
T 3byv_A 364 EQLR 367 (377)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 203
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.8e-40 Score=347.94 Aligned_cols=199 Identities=22% Similarity=0.359 Sum_probs=169.2
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC-----Ce
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY-----GQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 343 (579)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 458999999999999999999765 688999999987655556678899999999999999999999999765 57
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.|+||||++ |+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 69999986 345689999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCc-----------------------ccccCCCCCccCcccc-ccCCCCccchHHhHHHHHHHHHhCCCCCC
Q 008055 424 SNMPNADE-----------------------ALNNDAGSGYGAPEVA-MSGQYNIKSDVYSFGVVMLELLTGRKPFD 476 (579)
Q Consensus 424 ~~~~~~~~-----------------------~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGv~l~elltg~~p~~ 476 (579)
+....... .....+|.+|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 86643321 2445678899999986 56679999999999999999998655553
No 204
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.6e-41 Score=344.81 Aligned_cols=269 Identities=19% Similarity=0.273 Sum_probs=204.6
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCc---------------hhHHHHHHHHHHHhhcCCCCccce
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPS---------------EMCDDFIEMVSNISQLHHPNIMEL 334 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------~~~~~~~~e~~~l~~l~h~niv~l 334 (579)
.++|++.+.||+|+||.||+|.. +++.||+|++....... .....+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45899999999999999999988 89999999986432111 112789999999999999999999
Q ss_pred eeEEeeCCeEEEEEEecCCCChhhhhcc----cCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCEEE
Q 008055 335 VGYCSEYGQHLLVYEFRKNGSLHDFLHL----SDEDNKPLIWNSRVKIALGTARALEYLHE-VCSLSVVHKNIKSANILL 409 (579)
Q Consensus 335 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~----~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~iiH~Dlkp~Nill 409 (579)
++++.+.+..++||||+++|+|.+++.. .......+++..++.++.|++.||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998321 12225679999999999999999999997 5 99999999999999
Q ss_pred cCCCceEEecccccccCCCCCcccccCCCCCccCccccccC-CCCc-cchHHhHHHHHHHHHhCCCCCCCCCch-h-hhh
Q 008055 410 DNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSG-QYNI-KSDVYSFGVVMLELLTGRKPFDSSRPR-L-EQS 485 (579)
Q Consensus 410 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslGv~l~elltg~~p~~~~~~~-~-~~~ 485 (579)
+.++.+||+|||++...... ......++..|+|||++.+. .++. ++|||||||++|||++|+.||...... . ...
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 264 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 99999999999999865443 33445678899999999877 6666 999999999999999999999765431 1 111
Q ss_pred hhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 486 LVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+.....+........................+..+.+++.+||+.||++|||+.|+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1110000000000000000000000111345678999999999999999999999985
No 205
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.4e-41 Score=350.91 Aligned_cols=258 Identities=22% Similarity=0.333 Sum_probs=197.5
Q ss_pred CccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC------CeE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY------GQH 344 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 344 (579)
+|++.+.||+|+||.||+|.+. +++.||||++..... .+.+|+++++.++||||++++++|... ...
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 5888999999999999999875 689999999865431 223689999999999999999988542 236
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-CceEEeccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE-LNPQLSDCGLA 423 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~~ 423 (579)
++||||+++ +|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 789999975 67766654334566799999999999999999999965 99999999999999965 56899999999
Q ss_pred ccCCCCCcccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchh-hhhhhhh-ccccccChhHH
Q 008055 424 SNMPNADEALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL-EQSLVRW-ATPQLHDIDAL 500 (579)
Q Consensus 424 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 500 (579)
+............++..|+|||++.+. .++.++|||||||++|||++|+.||....... ...+... ..|. ...+
T Consensus 205 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~---~~~~ 281 (420)
T 1j1b_A 205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT---REQI 281 (420)
T ss_dssp EECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC---HHHH
T ss_pred hhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC---HHHH
Confidence 877655555566788999999999764 78999999999999999999999997654321 1111111 1111 1111
Q ss_pred hhhcCccc--------c-----CCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 501 AKMVDPAL--------K-----GLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 501 ~~~~~~~~--------~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+ .+.. . ..++...+.++.+|+.+||+.||++|||+.|+++
T Consensus 282 ~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Hhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 111 1110 0 0122344678999999999999999999999984
No 206
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-40 Score=334.99 Aligned_cols=258 Identities=23% Similarity=0.369 Sum_probs=195.4
Q ss_pred CCcccc-ceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 271 GSFNVE-NLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 271 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
+.|++. +.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 467774 78999999999999754 78999999997653 33467788999999884 799999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---eEEecccccc
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN---PQLSDCGLAS 424 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~~~ 424 (579)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 90 FEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999963 24688999999999999999999976 9999999999999998776 9999999987
Q ss_pred cCCCCC--------cccccCCCCCccCcccccc-----CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcc
Q 008055 425 NMPNAD--------EALNNDAGSGYGAPEVAMS-----GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWAT 491 (579)
Q Consensus 425 ~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 491 (579)
...... ......++..|+|||++.. ..++.++|||||||++|||++|+.||........ .|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----~~~~ 238 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC----GWDR 238 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS----CC--
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc----cccc
Confidence 553221 1123347789999999875 5588999999999999999999999976432110 0000
Q ss_pred ccccC--hhH-HhhhcCccccCCCCh----hhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 492 PQLHD--IDA-LAKMVDPALKGLYPV----KSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 492 ~~~~~--~~~-~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..... ... ...+.... ..++. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 239 GEACPACQNMLFESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp --CCHHHHHHHHHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccchhHHHHHHHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00000 000 01111000 11121 24568999999999999999999999986
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=330.90 Aligned_cols=251 Identities=24% Similarity=0.336 Sum_probs=198.6
Q ss_pred CccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEEe
Q 008055 272 SFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEF 350 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 350 (579)
+|.....||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 344556899999999999976 468899999997653 34457789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-CCceEEecccccccCCCC
Q 008055 351 RKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN-ELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 351 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~ 429 (579)
+++++|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 101 VPGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CSEEEHHHHHHHT-TCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred CCCCCHHHHHHhh-ccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 9999999999642 2234567888999999999999999976 9999999999999987 899999999999766443
Q ss_pred Cc-ccccCCCCCccCccccccCC--CCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 430 DE-ALNNDAGSGYGAPEVAMSGQ--YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 430 ~~-~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.. .....++..|+|||++.... ++.++||||||+++|+|++|+.||......... .......
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---------------~~~~~~~ 241 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---------------MFKVGMF 241 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---------------HHHHHHH
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---------------HHhhccc
Confidence 22 23345678999999997653 789999999999999999999999643211100 0000000
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
......+...+..+.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 242 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1122334556678999999999999999999999975
No 208
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6e-41 Score=370.64 Aligned_cols=250 Identities=19% Similarity=0.293 Sum_probs=206.2
Q ss_pred HHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeE
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQH 344 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 344 (579)
...++|++.+.||+|+||.||+|... +++.||||++++... .......+..|..++..+ +||||+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 45678999999999999999999765 688999999965321 123356678888888877 799999999999999999
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
|+||||+++|+|.++++. ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 418 ~lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999973 24689999999999999999999976 99999999999999999999999999998
Q ss_pred cCC-CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhh
Q 008055 425 NMP-NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKM 503 (579)
Q Consensus 425 ~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
... .........+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+
T Consensus 491 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~----------------~~~~i 554 (674)
T 3pfq_A 491 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----------------LFQSI 554 (674)
T ss_dssp ECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHH
T ss_pred ccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH----------------HHHHH
Confidence 643 2333445678999999999999999999999999999999999999997643211 11122
Q ss_pred cCccccCCCChhhHHHHHHHHHhcCCCCCCCCCCh-----HHHH
Q 008055 504 VDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPM-----SEVV 542 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl 542 (579)
+.. ...++...+.++.+|+.+||+.||++||++ .||+
T Consensus 555 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 555 MEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp HSS--CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred HhC--CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 221 123455667889999999999999999998 5555
No 209
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-41 Score=350.91 Aligned_cols=260 Identities=13% Similarity=0.110 Sum_probs=185.1
Q ss_pred CccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhc--CCCCcccee-------eEEee
Q 008055 272 SFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQL--HHPNIMELV-------GYCSE 340 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~~ 340 (579)
.|.+.+.||+|+||.||+|.+. +++.||||++...... ....+.+.+|+.+++.+ +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 4888999999999999999865 7899999999876542 34455667775444444 699988755 44433
Q ss_pred C-----------------CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCe
Q 008055 341 Y-----------------GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSR------VKIALGTARALEYLHEVCSLSV 397 (579)
Q Consensus 341 ~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~i 397 (579)
. ...++||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||++ +|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 2 34799999998 8999999743 223344555 77889999999999976 99
Q ss_pred EEcCCCCCCEEEcCCCceEEecccccccCCCCCcccccCCCCCccCcccccc--CCCCccchHHhHHHHHHHHHhCCCCC
Q 008055 398 VHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMS--GQYNIKSDVYSFGVVMLELLTGRKPF 475 (579)
Q Consensus 398 iH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~elltg~~p~ 475 (579)
+||||||+|||++.++.+||+|||+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999866432 224456689999999987 67999999999999999999999999
Q ss_pred CCCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH--HHHHHH
Q 008055 476 DSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ--ALVRLV 549 (579)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~i~ 549 (579)
.......... |..... ................+..+.+|+.+||+.||++|||+.++++ .++++.
T Consensus 294 ~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 294 GLVTPGIKGS---WKRPSL------RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TBCCTTCTTC---CCBCCT------TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred CCcCcccccc---hhhhhh------hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 7653321111 000000 0000111111112345678999999999999999999999984 344443
No 210
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1e-40 Score=338.24 Aligned_cols=269 Identities=22% Similarity=0.318 Sum_probs=201.5
Q ss_pred HhCCccccceeccCCceEEEEEEe--CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc---CCCCccceeeEEe----
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQF--ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL---HHPNIMELVGYCS---- 339 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 339 (579)
..++|++.+.||+|+||.||+|.. .+++.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346899999999999999999987 4688999999865433222233445566555544 8999999999987
Q ss_pred -eCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEe
Q 008055 340 -EYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLS 418 (579)
Q Consensus 340 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~ 418 (579)
.....++||||++ |+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999997 6999998642 234589999999999999999999976 99999999999999999999999
Q ss_pred cccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhh-ccccccC
Q 008055 419 DCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRW-ATPQLHD 496 (579)
Q Consensus 419 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~-~~~~~~~ 496 (579)
|||++.............++..|+|||++.+..++.++|||||||++|||++|+.||........ ..+... ..+....
T Consensus 163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred cCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 99999876544444456678899999999999999999999999999999999999986543211 111110 0000000
Q ss_pred h-------hHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 497 I-------DALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 497 ~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ..............+....+..+.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0000000000011122345678999999999999999999999984
No 211
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.7e-40 Score=330.63 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=205.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-------chhHHHHHHHHHHHhhcC-CCCccceeeEEee
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-------SEMCDDFIEMVSNISQLH-HPNIMELVGYCSE 340 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 340 (579)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.+++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999875 6899999999754321 123456788999999995 9999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecc
Q 008055 341 YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDC 420 (579)
Q Consensus 341 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Df 420 (579)
.+..++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999963 34689999999999999999999976 9999999999999999999999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccc------cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAM------SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
|++.............++..|+|||++. ...++.++||||||+++|+|++|..||..........
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--------- 239 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR--------- 239 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHH---------
Confidence 9998776555555566788999999985 4568899999999999999999999997543221100
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+... ............+..+.+++.+||+.||++|||+.++++
T Consensus 240 ----~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 ----MIMSG-NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ----HHHHT-CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ----HHhcC-CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00000 000011112345678999999999999999999999975
No 212
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=333.69 Aligned_cols=250 Identities=27% Similarity=0.439 Sum_probs=200.6
Q ss_pred HhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 3467999999999999999999775 58999999997543 246788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++|+|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 103 MEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred eecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999862 245689999999999999999999976 99999999999999999999999999997654
Q ss_pred CCCc-ccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCc
Q 008055 428 NADE-ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
.... .....++..|+|||++.+..++.++||||||+++|+|++|+.||.......... .+.....
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------------~~~~~~~- 242 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-------------MIPTNPP- 242 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------------HHHHSCC-
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-------------HHhcCCC-
Confidence 3322 233456789999999999999999999999999999999999997543221110 0000000
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.....+...+..+.+++.+||+.||++|||+.++++
T Consensus 243 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 243 -PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011123345678999999999999999999999985
No 213
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.4e-41 Score=332.43 Aligned_cols=248 Identities=25% Similarity=0.373 Sum_probs=204.9
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
++|++.+.||+|+||.||+|... +++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46899999999999999999775 5789999998543211 123467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999863 23588999999999999999999965 999999999999999999999999999876543
Q ss_pred CCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccc
Q 008055 429 ADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 508 (579)
Q Consensus 429 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
. ......++..|+|||++.+..++.++||||||+++|+|++|..||........ ...+...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------------~~~~~~~-- 227 (284)
T 2vgo_A 167 L-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET----------------HRRIVNV-- 227 (284)
T ss_dssp S-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHHHTT--
T ss_pred c-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH----------------HHHHhcc--
Confidence 2 23345678899999999999999999999999999999999999976432211 1111111
Q ss_pred cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 509 KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 509 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...++...+..+.+++.+||+.||++|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 112344456789999999999999999999999863
No 214
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-40 Score=346.12 Aligned_cols=263 Identities=21% Similarity=0.320 Sum_probs=198.0
Q ss_pred CCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe------E
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ------H 344 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~ 344 (579)
.+|++.+.||+|+||.||+|....+..+|+|++...... ..+|+.+++.++||||+++++++...+. .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 468999999999999999999887777999988654321 1268999999999999999999865433 7
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCceEEeccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD-NELNPQLSDCGLA 423 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg~~ 423 (579)
++||||++++ +...+.........+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||++
T Consensus 114 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 114 NLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 8999999764 4443332223456789999999999999999999976 999999999999999 7899999999999
Q ss_pred ccCCCCCcccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchh-hhhhhhh-ccccccChhHH
Q 008055 424 SNMPNADEALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL-EQSLVRW-ATPQLHDIDAL 500 (579)
Q Consensus 424 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 500 (579)
+............+++.|+|||++.+. .++.++|||||||++|||++|+.||....... ...+... ..|.......+
T Consensus 190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 190 KILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp EECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred ccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 877665555667788899999998765 58999999999999999999999997654321 1111111 11111000000
Q ss_pred h-hhcCccc--------cCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 501 A-KMVDPAL--------KGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 501 ~-~~~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ......+ ...++...+.++.+|+.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0 0000000 01122335578999999999999999999999985
No 215
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.3e-40 Score=342.24 Aligned_cols=273 Identities=23% Similarity=0.320 Sum_probs=195.9
Q ss_pred HHHHHHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCC
Q 008055 264 ADLQMATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG 342 (579)
Q Consensus 264 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 342 (579)
.+.....++|++.+.||+|+||.||+|... +++.||||++...... ...+.++++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 344566789999999999999999999875 6899999998654322 345677888888999999999999996644
Q ss_pred e-------EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-CCc
Q 008055 343 Q-------HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN-ELN 414 (579)
Q Consensus 343 ~-------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~-~~~ 414 (579)
. .++||||+++ +|...+.........+++..+..++.|++.||.|||.+ +.+|+||||||+|||++. ++.
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTE
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCc
Confidence 3 7899999976 55555543334566788999999999999999999932 349999999999999997 899
Q ss_pred eEEecccccccCCCCCcccccCCCCCccCccccccCC-CCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhccc
Q 008055 415 PQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQ-YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATP 492 (579)
Q Consensus 415 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~ 492 (579)
+||+|||++.............++..|+|||++.+.. ++.++|||||||++|||++|+.||........ ..+.+....
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 9999999998776655555667788999999987654 89999999999999999999999977543211 111111110
Q ss_pred cccChhHHhhhcC---------------ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 493 QLHDIDALAKMVD---------------PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 493 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. ....+..+.. .......+...+.++.+|+.+||+.||++|||+.|+++
T Consensus 251 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 251 P--SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp C--CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C--CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 0000000000 00011122335678999999999999999999999985
No 216
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-40 Score=333.77 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=201.7
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|.+.+.||+|+||.||++... +|+.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 347899999999999999999875 789999999975432 22456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCceEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL---DNELNPQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~~~~ 425 (579)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 86 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 86 QLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp CCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999998863 24588999999999999999999976 99999999999999 7889999999999875
Q ss_pred CCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
.... ......++..|+|||++.+..++.++|||||||++|||++|+.||......... ..+... .
T Consensus 159 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------------~~i~~~-~ 223 (304)
T 2jam_A 159 EQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF-------------EKIKEG-Y 223 (304)
T ss_dssp CCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------------HHHHHC-C
T ss_pred cCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH-------------HHHHcC-C
Confidence 4332 223345788999999999999999999999999999999999999764321100 000000 0
Q ss_pred ccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 506 PALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 506 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...........+..+.+++.+||+.||++|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 224 YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111222345678999999999999999999999986
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=341.14 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=196.7
Q ss_pred HHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEee-----
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSE----- 340 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----- 340 (579)
...++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3567899999999999999999987 478999999996543 2346788999999998 89999999999976
Q ss_pred -CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEec
Q 008055 341 -YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSD 419 (579)
Q Consensus 341 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~D 419 (579)
.+..++||||+++|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 56889999999999999999743 234688999999999999999999976 999999999999999999999999
Q ss_pred ccccccCCCCC-cccccCCCCCccCccccc-----cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhcccc
Q 008055 420 CGLASNMPNAD-EALNNDAGSGYGAPEVAM-----SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQ 493 (579)
Q Consensus 420 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 493 (579)
||++....... ......++..|+|||++. ...++.++|||||||++|+|++|..||..........
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------- 244 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-------- 244 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--------
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--------
Confidence 99987654322 223345678999999987 5668999999999999999999999996543221100
Q ss_pred ccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 LHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+... ......+...+..+.+++.+||..||++|||+.++++
T Consensus 245 -----~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 -----LIPRN---PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -----HHHHS---CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----HhhcC---ccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000 0111112334568999999999999999999999986
No 218
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-41 Score=346.67 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=200.6
Q ss_pred CCccccceeccCCceEEEEEEe----CCCcEEEEEEeCCCCC--CchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCe
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF----ADGKVLAVKKIDSSAL--PSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 343 (579)
++|++.+.||+|+||.||+++. .+++.||||+++.... .......+.+|+.++..+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4799999999999999999987 3789999999875332 112345567789999988 69999999999999999
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999963 24588999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCc--ccccCCCCCccCcccccc--CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 424 SNMPNADE--ALNNDAGSGYGAPEVAMS--GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 424 ~~~~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
+....... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ..
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-------------~~ 273 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-------------AE 273 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH-------------HH
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH-------------HH
Confidence 76543222 223467889999999985 34789999999999999999999999653221100 00
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCC-----ChHHHHHH
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRP-----PMSEVVQA 544 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 544 (579)
+..... .....++...+..+.+|+.+||..||++|| ++.++++.
T Consensus 274 ~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 274 ISRRIL-KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHh-ccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 100000 011233455667899999999999999999 88998864
No 219
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-40 Score=366.75 Aligned_cols=261 Identities=23% Similarity=0.406 Sum_probs=210.5
Q ss_pred HHhCCccccceeccCCceEEEEEEeCC----CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQFAD----GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ 343 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 343 (579)
+..++|++.+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.++++++||||+++++++. .+.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 345679999999999999999997742 4679999986543 3445678999999999999999999999985 467
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp CEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCC
Confidence 8999999999999999963 344689999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCccc--ccCCCCCccCccccccCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 424 SNMPNADEAL--NNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 424 ~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
+......... ...++..|+|||++....++.++|||||||++|||++ |..||........ +
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~----------------~ 602 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV----------------I 602 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------H
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH----------------H
Confidence 8764433221 2234568999999998899999999999999999997 9999976432211 0
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
.. +........+..++..+.+++.+||+.||++|||+.++++.|++++++..
T Consensus 603 ~~-i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k 654 (656)
T 2j0j_A 603 GR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654 (656)
T ss_dssp HH-HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HH-HHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 00 00111222345567789999999999999999999999999999987654
No 220
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-40 Score=331.36 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=203.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 457999999999999999999875 7899999999765544455778999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC---CceEEeccccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE---LNPQLSDCGLASN 425 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfg~~~~ 425 (579)
||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++..
T Consensus 101 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 99999999998853 24589999999999999999999976 99999999999999754 4699999999986
Q ss_pred CCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhcC
Q 008055 426 MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVD 505 (579)
Q Consensus 426 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
...........++..|+|||.+.+ .++.++||||||+++|+|++|..||......... ..+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----------------~~~~~ 236 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----------------KRVET 236 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHH
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHc
Confidence 654443334446778999998865 5899999999999999999999999764322110 00000
Q ss_pred ccccCCC--ChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 506 PALKGLY--PVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 506 ~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
....... ....+..+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0000000 1234568999999999999999999999986
No 221
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.4e-40 Score=342.39 Aligned_cols=263 Identities=19% Similarity=0.300 Sum_probs=187.2
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC------C
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY------G 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 342 (579)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999975 4789999999976655555677889999999999999999999998653 5
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
..++|||++ +++|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 789999885 24689999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcc-cc------
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWAT-PQ------ 493 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~~------ 493 (579)
++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+..... |.
T Consensus 179 a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 179 ARHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ccccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9765432 334567889999999886 6789999999999999999999999976543211 11111111 00
Q ss_pred ccCh--hHHhhhcCccccCC---CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 LHDI--DALAKMVDPALKGL---YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~--~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+... ....+.+....... .....+..+.+|+.+||..||++|||+.++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000 00000000000000 01123467899999999999999999999985
No 222
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1e-40 Score=338.46 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=180.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHH-HHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVS-NISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... +++.||||++...... .....+..|+. +++.++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE-KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH-HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc-hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 357889999999999999999875 7899999999765432 33344555555 67788999999999999999999999
Q ss_pred EEecCCCChhhhhccc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccC
Q 008055 348 YEFRKNGSLHDFLHLS-DEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
|||+++ +|.+++... ......+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++...
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 999975 887777521 12356789999999999999999999963 28999999999999999999999999999876
Q ss_pred CCCCcccccCCCCCccCcccc----ccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 427 PNADEALNNDAGSGYGAPEVA----MSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 427 ~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
..........++..|+|||++ .+..++.++|||||||++|||++|+.||......... +... ..
T Consensus 177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~-----------~~ 244 (327)
T 3aln_A 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LTQV-----------VK 244 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCC-----------CC
T ss_pred ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-HHHH-----------hc
Confidence 554444444678899999998 4567899999999999999999999999753221100 0000 00
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
...+.+........+..+.+++.+||+.||++|||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00011111122345678999999999999999999999986
No 223
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.5e-40 Score=343.67 Aligned_cols=200 Identities=21% Similarity=0.321 Sum_probs=171.6
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc------CCCCccceeeEEeeCC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL------HHPNIMELVGYCSEYG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~ 342 (579)
..+|++.+.||+|+||.||+|... +++.||||++... ......+.+|+.+++.+ +|+||+++++++...+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 457999999999999999999765 5899999999653 23345667777777666 6789999999999999
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc--eEEecc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN--PQLSDC 420 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~--~kl~Df 420 (579)
..++||||+. ++|.+++... ....+++..++.|+.||+.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred eEEEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 9999999995 6999988642 234589999999999999999999987 9999999999999999887 999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCc
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRP 480 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~ 480 (579)
|++..... ......+++.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus 247 G~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 247 GSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99976533 23345678899999999999999999999999999999999999976543
No 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.6e-40 Score=333.02 Aligned_cols=251 Identities=25% Similarity=0.440 Sum_probs=198.2
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 357999999999999999999876 58999999987543 334678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++++|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 96 EFCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp ECCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EeCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999998863 235689999999999999999999976 999999999999999999999999998753211
Q ss_pred C-CcccccCCCCCccCccccc-----cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 429 A-DEALNNDAGSGYGAPEVAM-----SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 429 ~-~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
. .......++..|+|||++. ...++.++||||||+++|+|++|..||........ ... +..
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~-----------~~~ 236 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLK-----------IAK 236 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHH-----------HHH
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHH-----------Hhc
Confidence 1 1122345678999999984 56789999999999999999999999976432211 000 000
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
. .......+...+..+.+++.+||+.||++|||+.++++
T Consensus 237 ~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 237 S--DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp S--CCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c--CCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 00011123445678999999999999999999999985
No 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-40 Score=333.54 Aligned_cols=263 Identities=26% Similarity=0.416 Sum_probs=187.6
Q ss_pred HHhCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEE
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 346 (579)
+..++|++.+.||+|+||.||+|... +++.||||++..... ......+.+|+..+++++||||+++++++...+..++
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 44678999999999999999999764 689999999865432 2335678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcccC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 347 VYEFRKNGSLHDFLHLSD----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 347 v~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 999999999999986321 1245689999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCc------ccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhh-hhccccc
Q 008055 423 ASNMPNADE------ALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLV-RWATPQL 494 (579)
Q Consensus 423 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~-~~~~~~~ 494 (579)
+........ .....++..|+|||++.. ..++.++||||||+++|||++|+.||............ ....+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 876543221 123456789999999875 56899999999999999999999999765432111000 0000000
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. ...+ .......+..+.+++.+||+.||++|||+.++++
T Consensus 248 ~~-----~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 ET-----GVQD----KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TC--------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cc-----cccc----chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 0000 1112234568999999999999999999999985
No 226
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=328.26 Aligned_cols=251 Identities=24% Similarity=0.330 Sum_probs=198.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC--chhHHHHHHHHHHHhhcCCCCccceeeEE--eeCCeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP--SEMCDDFIEMVSNISQLHHPNIMELVGYC--SEYGQH 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~~ 344 (579)
.++|++.+.||+|+||.||++... +++.||+|++...... ......+.+|+.+++.++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999874 6889999999653211 23457789999999999999999999998 445688
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 345 LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 345 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
++||||+++| |.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 77776532 345689999999999999999999976 99999999999999999999999999997
Q ss_pred cCCCC---CcccccCCCCCccCccccccCC--CCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhH
Q 008055 425 NMPNA---DEALNNDAGSGYGAPEVAMSGQ--YNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDA 499 (579)
Q Consensus 425 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (579)
..... .......++..|+|||++.+.. ++.++||||||+++|||++|+.||......... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------------~~ 224 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF-------------EN 224 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------------HH
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-------------HH
Confidence 65432 2223445788999999997644 478999999999999999999999764321100 00
Q ss_pred HhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 500 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
+.. . ....+..++..+.+++.+||+.||++|||+.++++.
T Consensus 225 i~~---~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 225 IGK---G--SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHH---C--CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Hhc---C--CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 100 0 112334456789999999999999999999999864
No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.5e-39 Score=329.37 Aligned_cols=263 Identities=21% Similarity=0.337 Sum_probs=203.2
Q ss_pred hCCccccceeccCCceEEEEEEe--CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCC------ccceeeEEeeC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF--ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPN------IMELVGYCSEY 341 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 341 (579)
.++|++.+.||+|+||.||+|.. .+++.||||+++.. ......+.+|+.+++.++|++ ++++++++.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 45899999999999999999976 36889999999643 244567888999888887654 99999999999
Q ss_pred CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC----------
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---------- 411 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---------- 411 (579)
+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999 88999998632 234688999999999999999999976 9999999999999987
Q ss_pred ---------CCceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh
Q 008055 412 ---------ELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL 482 (579)
Q Consensus 412 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~ 482 (579)
++.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++|..||.......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred cccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 668999999999765432 234567889999999999999999999999999999999999997654322
Q ss_pred hhhhhhhccccccC-------------------------hhHHhhhcCccc-cCCCChhhHHHHHHHHHhcCCCCCCCCC
Q 008055 483 EQSLVRWATPQLHD-------------------------IDALAKMVDPAL-KGLYPVKSLSRFADVIALCVQPEPEFRP 536 (579)
Q Consensus 483 ~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rp 536 (579)
.............. .........+.. ....+...+..+.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 11111100000000 000001111000 1122345678899999999999999999
Q ss_pred ChHHHHH
Q 008055 537 PMSEVVQ 543 (579)
Q Consensus 537 s~~evl~ 543 (579)
|+.|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999974
No 228
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.7e-39 Score=333.79 Aligned_cols=262 Identities=20% Similarity=0.328 Sum_probs=200.0
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeE----
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQH---- 344 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 344 (579)
.++|.+.+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 457999999999999999999765 689999999987665566678899999999999999999999999876654
Q ss_pred --EEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 345 --LLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 345 --~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999996 68888773 3489999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcc-c------c
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWAT-P------Q 493 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~-~------~ 493 (579)
++.... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||........ ..+..... + .
T Consensus 191 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 191 ARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp C----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 976533 2334567889999999987 6789999999999999999999999976543211 11111000 0 0
Q ss_pred ccCh--hHHhhhcCccccCC---CChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 LHDI--DALAKMVDPALKGL---YPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~--~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+... .............. .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000 00000000000000 11234578999999999999999999999985
No 229
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.4e-40 Score=337.20 Aligned_cols=264 Identities=19% Similarity=0.296 Sum_probs=200.8
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC-----Ce
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY-----GQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 343 (579)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 357999999999999999999765 68899999997533 344557889999999999999999999998654 46
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||++ |+|.+++.. ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999996 599998862 3589999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCc----ccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhcccccc--
Q 008055 424 SNMPNADE----ALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLH-- 495 (579)
Q Consensus 424 ~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~-- 495 (579)
........ .....+++.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.........
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 76643322 123467889999998764 4589999999999999999999999976543211 111111110000
Q ss_pred -----ChhHHhhhcCccccCCC-----ChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 496 -----DIDALAKMVDPALKGLY-----PVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 496 -----~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
................. ....+..+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000000000 1234567899999999999999999999985
No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=333.21 Aligned_cols=262 Identities=19% Similarity=0.329 Sum_probs=200.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe-----
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ----- 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 343 (579)
.++|.+.+.||+|+||.||+|... +|+.||||++............+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357999999999999999999764 68999999998766555667788999999999999999999999977654
Q ss_pred -EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 344 -HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 344 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
.++||||+. |+|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 68888764 2489999999999999999999976 999999999999999999999999999
Q ss_pred cccCCCCCcccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhc-cc------c
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWA-TP------Q 493 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~-~~------~ 493 (579)
+...... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.... .+ .
T Consensus 173 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 173 ARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred ccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 8765332 233466889999999876 6789999999999999999999999976543211 1111100 00 0
Q ss_pred ccCh--hHHhhhcCcccc---CCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 494 LHDI--DALAKMVDPALK---GLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 494 ~~~~--~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
+.+. ............ .......+..+.+++.+||+.||++|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 000000000001 1122345678999999999999999999999985
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=329.88 Aligned_cols=262 Identities=21% Similarity=0.314 Sum_probs=193.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe---------
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS--------- 339 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------- 339 (579)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 357999999999999999999876 58999999986543 455678899999999999999999999873
Q ss_pred -----eCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCC
Q 008055 340 -----EYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD-NEL 413 (579)
Q Consensus 340 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~-~~~ 413 (579)
+....++||||++ |+|.+++. ...+++..++.++.|++.||+|||++ +|+||||||+|||++ +++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 4467899999997 69999985 34688999999999999999999976 999999999999997 567
Q ss_pred ceEEecccccccCCCCC----cccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhh
Q 008055 414 NPQLSDCGLASNMPNAD----EALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLV 487 (579)
Q Consensus 414 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~ 487 (579)
.+||+|||++....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||......... .+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998654321 1223345778999998875 67899999999999999999999999865432111 111
Q ss_pred hhccccccC--hhHHhhhcC----cccc-C-----CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 488 RWATPQLHD--IDALAKMVD----PALK-G-----LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 488 ~~~~~~~~~--~~~~~~~~~----~~~~-~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. .+.... ...+..... .... . ......+..+.+++.+||+.||++|||+.++++
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 239 ES-IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HH-SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred Hh-cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 10 111000 000000000 0000 0 011234578999999999999999999999986
No 232
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.3e-39 Score=339.27 Aligned_cols=264 Identities=20% Similarity=0.302 Sum_probs=199.9
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC--------CCCccceeeEEe-
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH--------HPNIMELVGYCS- 339 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~- 339 (579)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 46899999999999999999976 46889999999643 344577889999998885 888999999987
Q ss_pred ---eCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---
Q 008055 340 ---EYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL--- 413 (579)
Q Consensus 340 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~--- 413 (579)
.....++||||+ +++|.+++.. .....+++..++.|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 556889999999 5666666642 23356899999999999999999999632 899999999999999775
Q ss_pred ----------------------------------------------ceEEecccccccCCCCCcccccCCCCCccCcccc
Q 008055 414 ----------------------------------------------NPQLSDCGLASNMPNADEALNNDAGSGYGAPEVA 447 (579)
Q Consensus 414 ----------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 447 (579)
.+||+|||++...... .....+|..|+|||++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhh
Confidence 7999999999766432 3345678899999999
Q ss_pred ccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh----h---hhhhhhcccc--------------ccChhHHhhhcCc
Q 008055 448 MSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL----E---QSLVRWATPQ--------------LHDIDALAKMVDP 506 (579)
Q Consensus 448 ~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~----~---~~~~~~~~~~--------------~~~~~~~~~~~~~ 506 (579)
.+..++.++|||||||++|||++|+.||....... . ..+....... .........+.+.
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 99999999999999999999999999997543211 0 0011110000 0000000000000
Q ss_pred ---------cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 507 ---------ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 507 ---------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
......+...+..+.+|+.+||+.||++|||+.|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0011235667788999999999999999999999985
No 233
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=330.20 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=182.7
Q ss_pred CCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEEE
Q 008055 271 GSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYE 349 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 349 (579)
++|++.+.||+|+||.||+|... +++.||||++..........+.+.++..+++.++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 46888999999999999999875 78999999997665444444555666667888899999999999999999999999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCC
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA 429 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 429 (579)
|+ ++.+..+... ....+++..++.++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++......
T Consensus 105 ~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 105 LM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 99 5555555432 245689999999999999999999962 28999999999999999999999999999766554
Q ss_pred CcccccCCCCCccCccccc-----cCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc
Q 008055 430 DEALNNDAGSGYGAPEVAM-----SGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV 504 (579)
Q Consensus 430 ~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
.......++..|+|||++. ...++.++|||||||++|||++|+.||......... +. .+....
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~-----------~~~~~~ 246 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV-LT-----------KVLQEE 246 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-HH-----------HHHHSC
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH-HH-----------HHhccC
Confidence 4444556788999999994 456889999999999999999999999753321110 00 000000
Q ss_pred CccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 505 DPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.+.. ......+..+.+++.+||+.||++|||+.++++
T Consensus 247 ~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 247 PPLL--PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCC--CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCC--CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0000 011234568999999999999999999999986
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.3e-39 Score=326.19 Aligned_cols=249 Identities=26% Similarity=0.442 Sum_probs=193.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee--------
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE-------- 340 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 340 (579)
.++|++.+.||+|+||.||+|... +++.||+|++... ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 347899999999999999999864 7899999999542 3446778899999999999999999998854
Q ss_pred -----CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCce
Q 008055 341 -----YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNP 415 (579)
Q Consensus 341 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~ 415 (579)
.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 4578999999999999999963 344678899999999999999999976 99999999999999999999
Q ss_pred EEecccccccCCCC---------------CcccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCC
Q 008055 416 QLSDCGLASNMPNA---------------DEALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSR 479 (579)
Q Consensus 416 kl~Dfg~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~ 479 (579)
||+|||++...... .......++..|+|||++.+. .++.++|||||||++|||++ ||....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999998765422 112234567789999999764 68999999999999999998 554211
Q ss_pred chhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 480 PRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. ..... .+. .........++...+..+.+++.+||+.||++|||+.++++
T Consensus 233 ~~--~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ER--VNILK----------KLR-SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH--HHHHH----------HHH-STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hH--HHHHH----------hcc-ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 10 00000 000 01112223344556678999999999999999999999985
No 235
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=341.47 Aligned_cols=264 Identities=21% Similarity=0.316 Sum_probs=182.3
Q ss_pred Cccc-cceeccCCceEEEEEEeC---CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe--eCCeEE
Q 008055 272 SFNV-ENLLGEGTFGRVYRAQFA---DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS--EYGQHL 345 (579)
Q Consensus 272 ~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 345 (579)
.|++ .++||+|+||.||+|.++ +++.||||++..... ...+.+|+.++++++||||+++++++. .....+
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 3555 458999999999999875 578999999975543 356789999999999999999999995 467899
Q ss_pred EEEEecCCCChhhhhcccC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE----cCCCceE
Q 008055 346 LVYEFRKNGSLHDFLHLSD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL----DNELNPQ 416 (579)
Q Consensus 346 lv~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill----~~~~~~k 416 (579)
+||||+. |+|.+++.... .....+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 9999996 58888775321 1223589999999999999999999976 99999999999999 6778999
Q ss_pred EecccccccCCCCC----cccccCCCCCccCccccccC-CCCccchHHhHHHHHHHHHhCCCCCCCCCchh---------
Q 008055 417 LSDCGLASNMPNAD----EALNNDAGSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL--------- 482 (579)
Q Consensus 417 l~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~elltg~~p~~~~~~~~--------- 482 (579)
|+|||+++...... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 99999997654321 22335678899999999874 58999999999999999999999996543211
Q ss_pred -hhhhhh-hccccccChh---------HHhhhcCccccCC---------CChhhHHHHHHHHHhcCCCCCCCCCChHHHH
Q 008055 483 -EQSLVR-WATPQLHDID---------ALAKMVDPALKGL---------YPVKSLSRFADVIALCVQPEPEFRPPMSEVV 542 (579)
Q Consensus 483 -~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 542 (579)
...+.. ...|....+. ............. .....+..+.+|+.+||+.||++|||+.|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000000 0111100000 0000000000000 0011145788999999999999999999998
Q ss_pred H
Q 008055 543 Q 543 (579)
Q Consensus 543 ~ 543 (579)
+
T Consensus 333 ~ 333 (405)
T 3rgf_A 333 Q 333 (405)
T ss_dssp T
T ss_pred c
Confidence 5
No 236
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.5e-39 Score=330.96 Aligned_cols=253 Identities=20% Similarity=0.298 Sum_probs=174.0
Q ss_pred hCCcccc-ceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee----CCe
Q 008055 270 TGSFNVE-NLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE----YGQ 343 (579)
Q Consensus 270 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 343 (579)
.++|.+. +.||+|+||.||+|... +++.||||++... .....+....++.++||||+++++++.. ...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS------PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 3478885 46999999999999876 6899999998642 1222333344567799999999999876 455
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCceEEecc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---ELNPQLSDC 420 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---~~~~kl~Df 420 (579)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 89999999999999999732 235689999999999999999999976 9999999999999976 455999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
|++...... ......+++.|+|||++....++.++|||||||++|+|++|+.||.......... .... .+
T Consensus 176 g~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------~~~~--~~ 245 (336)
T 3fhr_A 176 GFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-------GMKR--RI 245 (336)
T ss_dssp TTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred ccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-------hHHH--hh
Confidence 999765432 2334556889999999988889999999999999999999999996543211000 0000 00
Q ss_pred hhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 501 AKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
...............+..+.+++.+||+.||++|||+.++++.
T Consensus 246 -~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 246 -RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -hccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000011111123456789999999999999999999999873
No 237
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.1e-39 Score=330.15 Aligned_cols=264 Identities=22% Similarity=0.344 Sum_probs=199.4
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeC-----Ce
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY-----GQ 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 343 (579)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 457999999999999999999875 68999999996433 334566788999999999999999999988654 67
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEeccccc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 423 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~ 423 (579)
.++||||+. |+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 89 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 899999996 699998862 4689999999999999999999976 9999999999999999999999999999
Q ss_pred ccCCCCCc-----------ccccCCCCCccCcccccc-CCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhhhh-
Q 008055 424 SNMPNADE-----------ALNNDAGSGYGAPEVAMS-GQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLVRW- 489 (579)
Q Consensus 424 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~~~- 489 (579)
........ .....++..|+|||++.. ..++.++|||||||++|||++|+.||......... .+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 76543221 112356778999998764 67899999999999999999999999765432111 11110
Q ss_pred cccccc------ChhHHhhhcCc--ccc-C---CCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 490 ATPQLH------DIDALAKMVDP--ALK-G---LYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 490 ~~~~~~------~~~~~~~~~~~--~~~-~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
..+... ........... ... . ......+..+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 00000000000 000 0 001234568899999999999999999999986
No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.5e-38 Score=329.51 Aligned_cols=202 Identities=24% Similarity=0.363 Sum_probs=170.5
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CC-----CccceeeEEeeCC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HP-----NIMELVGYCSEYG 342 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~ 342 (579)
.++|++.+.||+|+||.||+|... +++.||||+++.. ......+..|+.+++.++ |+ +|+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 568999999999999999999765 6889999999743 234566777888887774 44 4999999999999
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc--CCCceEEecc
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD--NELNPQLSDC 420 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~--~~~~~kl~Df 420 (579)
..++||||++ |+|.+++... ....+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred ceEEEEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999995 5999998743 234589999999999999999999953 35999999999999995 4788999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCc
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRP 480 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~ 480 (579)
|++..... ......+++.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 206 G~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 206 GSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp TTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99987643 23345678899999999999999999999999999999999999986543
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.9e-39 Score=340.26 Aligned_cols=250 Identities=22% Similarity=0.354 Sum_probs=187.7
Q ss_pred CccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEEEEe
Q 008055 272 SFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLVYEF 350 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 350 (579)
.|.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+.+..++||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 45567889999999998777778999999998542 245678899999876 899999999999999999999999
Q ss_pred cCCCChhhhhcccCCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-------------Cc
Q 008055 351 RKNGSLHDFLHLSDEDNKP---LIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE-------------LN 414 (579)
Q Consensus 351 ~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~-------------~~ 414 (579)
+. |+|.+++......... ..+..++.++.||+.||+|||++ +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 6999999743322221 13334678999999999999976 99999999999999754 48
Q ss_pred eEEecccccccCCCCCcc-----cccCCCCCccCcccccc-------CCCCccchHHhHHHHHHHHHh-CCCCCCCCCch
Q 008055 415 PQLSDCGLASNMPNADEA-----LNNDAGSGYGAPEVAMS-------GQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPR 481 (579)
Q Consensus 415 ~kl~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~ 481 (579)
+||+|||++......... ....+|+.|+|||++.+ ..++.++|||||||++|||++ |..||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999876543321 23457889999999975 568999999999999999999 99999654322
Q ss_pred hhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 482 LEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
.. .+..... ..+......+...+.++.+++.+||+.||++|||+.++++
T Consensus 247 ~~-~i~~~~~------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 ES-NIIRGIF------------SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH-HHHHTCC------------CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-HHhcCCC------------CcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 1111000 0011111223456788999999999999999999999985
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=327.39 Aligned_cols=245 Identities=23% Similarity=0.394 Sum_probs=192.0
Q ss_pred HHHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCc----hhHHHHHHHHHHHhhc----CCCCccceeeE
Q 008055 267 QMATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPS----EMCDDFIEMVSNISQL----HHPNIMELVGY 337 (579)
Q Consensus 267 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~~ 337 (579)
....++|++.+.||+|+||.||+|.. .+++.||+|++....... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34567899999999999999999976 468899999997654321 1223455688888888 89999999999
Q ss_pred EeeCCeEEEEEEe-cCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCce
Q 008055 338 CSEYGQHLLVYEF-RKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD-NELNP 415 (579)
Q Consensus 338 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~-~~~~~ 415 (579)
+...+..++|||| +.+++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 789999999963 34589999999999999999999987 999999999999999 88999
Q ss_pred EEecccccccCCCCCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccc
Q 008055 416 QLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL 494 (579)
Q Consensus 416 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 494 (579)
||+|||++...... ......++..|+|||++.+..+ +.++||||||+++|||++|+.||..... .
T Consensus 180 kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~-------- 245 (312)
T 2iwi_A 180 KLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----I-------- 245 (312)
T ss_dssp EECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H--------
T ss_pred EEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----H--------
Confidence 99999999876543 3334567889999999987766 4589999999999999999999964211 0
Q ss_pred cChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 495 HDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
... ...++...+..+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 -----LEA------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -----HHT------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----hhh------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 11123445578999999999999999999999986
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.1e-40 Score=331.18 Aligned_cols=244 Identities=21% Similarity=0.369 Sum_probs=199.8
Q ss_pred HHhCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCc----hhHHHHHHHHHHHhhcC--CCCccceeeEEee
Q 008055 268 MATGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPS----EMCDDFIEMVSNISQLH--HPNIMELVGYCSE 340 (579)
Q Consensus 268 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~ 340 (579)
...++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456899999999999999999975 478999999996543322 12245667889999885 5999999999999
Q ss_pred CCeEEEEEEecCC-CChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCceEEe
Q 008055 341 YGQHLLVYEFRKN-GSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD-NELNPQLS 418 (579)
Q Consensus 341 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~-~~~~~kl~ 418 (579)
.+..++|||++.+ ++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++ +++.+||+
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999976 899999863 34688999999999999999999976 999999999999999 78999999
Q ss_pred cccccccCCCCCcccccCCCCCccCccccccCCC-CccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccCh
Q 008055 419 DCGLASNMPNADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDI 497 (579)
Q Consensus 419 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 497 (579)
|||++...... ......++..|+|||++....+ +.++|||||||++|||++|+.||..... .
T Consensus 193 Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~----------- 255 (320)
T 3a99_A 193 DFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----I----------- 255 (320)
T ss_dssp CCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H-----------
T ss_pred eCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----h-----------
Confidence 99999876542 2334567889999999987766 6889999999999999999999964211 0
Q ss_pred hHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHH
Q 008055 498 DALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQ 543 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 543 (579)
... ...++...+..+.+++.+||+.||++|||+.++++
T Consensus 256 --~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 --IRG------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --HHC------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hcc------cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 01122344568999999999999999999999986
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.3e-38 Score=324.62 Aligned_cols=263 Identities=20% Similarity=0.283 Sum_probs=199.9
Q ss_pred hCCccccceeccCCceEEEEEEeC-CC-cEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCC------ccceeeEEeeC
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DG-KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPN------IMELVGYCSEY 341 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 341 (579)
.++|++.+.||+|+||.||+|... ++ +.||+|++... ......+.+|+.+++.++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 468999999999999999999764 34 68999999643 344567788999998887766 89999999999
Q ss_pred CeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE------------
Q 008055 342 GQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL------------ 409 (579)
Q Consensus 342 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill------------ 409 (579)
+..++||||+ +++|.+++.. .....+++..++.++.||+.||+|||++ +|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CeEEEEEecc-CCChHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 9999999999 6677777653 2235689999999999999999999965 99999999999999
Q ss_pred -------cCCCceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh
Q 008055 410 -------DNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL 482 (579)
Q Consensus 410 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~ 482 (579)
+.++.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56789999999999765332 234567889999999999999999999999999999999999997654322
Q ss_pred hhh-hhhhcccccc------------------------ChhHHhhhcCccc-cCCCChhhHHHHHHHHHhcCCCCCCCCC
Q 008055 483 EQS-LVRWATPQLH------------------------DIDALAKMVDPAL-KGLYPVKSLSRFADVIALCVQPEPEFRP 536 (579)
Q Consensus 483 ~~~-~~~~~~~~~~------------------------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rp 536 (579)
... +.....+... ..........+.. ........+..+.+|+.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 111 1111000000 0000000000000 0112234567899999999999999999
Q ss_pred ChHHHHH
Q 008055 537 PMSEVVQ 543 (579)
Q Consensus 537 s~~evl~ 543 (579)
|+.|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999984
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=337.35 Aligned_cols=245 Identities=21% Similarity=0.315 Sum_probs=185.4
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 348 (579)
..+|.+.+.||+|+||+||.....+++.||||++..... ..+.+|+.+++.+ +||||+++++++.+....++||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 346888999999999997666667899999999965432 2345789999988 8999999999999999999999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-----CCceEEeccccc
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN-----ELNPQLSDCGLA 423 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfg~~ 423 (579)
||+. |+|.+++... ...+.+..++.++.||+.||+|||++ +|+||||||+|||++. ...+||+|||++
T Consensus 98 E~~~-g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 98 ELCA-ATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp ECCS-EEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred ECCC-CCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9996 6999998732 23344455678999999999999976 9999999999999953 235789999999
Q ss_pred ccCCCCC----cccccCCCCCccCccccc---cCCCCccchHHhHHHHHHHHHh-CCCCCCCCCchhhhhhhhhcccccc
Q 008055 424 SNMPNAD----EALNNDAGSGYGAPEVAM---SGQYNIKSDVYSFGVVMLELLT-GRKPFDSSRPRLEQSLVRWATPQLH 495 (579)
Q Consensus 424 ~~~~~~~----~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 495 (579)
+...... ......+|+.|+|||++. ...++.++|||||||++|||++ |..||.............
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~------- 243 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG------- 243 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTT-------
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhc-------
Confidence 8765432 223356788999999997 4567889999999999999999 999996543221111000
Q ss_pred ChhHHhhhcCccccC-CCChhhHHHHHHHHHhcCCCCCCCCCChHHHH
Q 008055 496 DIDALAKMVDPALKG-LYPVKSLSRFADVIALCVQPEPEFRPPMSEVV 542 (579)
Q Consensus 496 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 542 (579)
...... ..+......+.+|+.+||+.||++|||+.+++
T Consensus 244 ---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 244 ---------ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp ---------CCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ---------cCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence 000000 11233456688999999999999999999998
No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.6e-38 Score=313.11 Aligned_cols=236 Identities=15% Similarity=0.143 Sum_probs=187.1
Q ss_pred hCCccccceeccCCceEEEEEEeC-CCcEEEEEEeCCCCCC-chhHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSALP-SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 347 (579)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+..+..++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357999999999999999999875 5899999999866543 44567899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||+++++|.+++.. . ....++..|+.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 999999999999852 1 35567889999999999999976 99999999999999999999998544
Q ss_pred CCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhh-hhhhhccccccChhHHhhhcCc
Q 008055 428 NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ-SLVRWATPQLHDIDALAKMVDP 506 (579)
Q Consensus 428 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
|++ .++.++|||||||++|||++|+.||......... ..............
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 226 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPA-------- 226 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHH--------
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChh--------
Confidence 333 3688999999999999999999999764431100 00000000000000
Q ss_pred cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Q 008055 507 ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRAN 553 (579)
Q Consensus 507 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~i~~~~~ 553 (579)
......+..+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 227 ----~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 227 ----DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp ----HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred ----hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 0112345679999999999999999 99999999998875444
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.7e-39 Score=346.87 Aligned_cols=271 Identities=21% Similarity=0.314 Sum_probs=209.7
Q ss_pred CCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEee------CCe
Q 008055 271 GSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSE------YGQ 343 (579)
Q Consensus 271 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 343 (579)
++|++.+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.++++++||||+++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 5799999999999999999976 468999999987543 34556789999999999999999999998765 677
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---eEEecc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELN---PQLSDC 420 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~---~kl~Df 420 (579)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999997432 234688899999999999999999976 9999999999999997765 899999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHH
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDAL 500 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
|++.............++..|+|||++.+..++.++|||||||++|+|++|..||...... ..|....... ...
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~-~~~ 242 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREK-SNE 242 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcc-cch
Confidence 9998776655555567888999999999999999999999999999999999999754221 1111100000 000
Q ss_pred hhhcC----------c--cccCCCChhhHHHHHHHHHhcCCCCCCCCCChHH-----HHHHHHHHHHHc
Q 008055 501 AKMVD----------P--ALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSE-----VVQALVRLVQRA 552 (579)
Q Consensus 501 ~~~~~----------~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e-----vl~~L~~i~~~~ 552 (579)
..... . ..........+..+.+++.+||..||++|||+.+ +.+.+..++...
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 00000 0 0112234567889999999999999999999998 667777777544
No 246
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.1e-38 Score=329.60 Aligned_cols=262 Identities=18% Similarity=0.302 Sum_probs=198.3
Q ss_pred hCCccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-----------CCCccceeeE
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-----------HPNIMELVGY 337 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 337 (579)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+|+.++++++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 35799999999999999999976 57899999999643 234566788888888776 8999999999
Q ss_pred EeeCC----eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc---
Q 008055 338 CSEYG----QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD--- 410 (579)
Q Consensus 338 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~--- 410 (579)
+...+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ .+|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccC
Confidence 87654 789999999 89999998642 234589999999999999999999963 2899999999999994
Q ss_pred ---CCCceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchh----h
Q 008055 411 ---NELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL----E 483 (579)
Q Consensus 411 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~----~ 483 (579)
..+.+||+|||++..... ......++..|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CCcCcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 445899999999976643 2334567889999999999999999999999999999999999997543210 0
Q ss_pred ---hhhhhhcccccc--------------C-----------hhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCC
Q 008055 484 ---QSLVRWATPQLH--------------D-----------IDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFR 535 (579)
Q Consensus 484 ---~~~~~~~~~~~~--------------~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 535 (579)
..+.....+.-. . ...+.... .....++...+..+.+|+.+||+.||++|
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL--TEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHH--HHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhh--hhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 011111000000 0 00000000 00123456778899999999999999999
Q ss_pred CChHHHHH
Q 008055 536 PPMSEVVQ 543 (579)
Q Consensus 536 ps~~evl~ 543 (579)
||+.|+++
T Consensus 326 pt~~ell~ 333 (373)
T 1q8y_A 326 ADAGGLVN 333 (373)
T ss_dssp BCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999986
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-38 Score=349.14 Aligned_cols=244 Identities=20% Similarity=0.337 Sum_probs=196.9
Q ss_pred hCCccccceeccCCceEEEEEEeC--CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEeeCCe----
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFA--DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQ---- 343 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 343 (579)
.++|++.+.||+|+||.||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 368999999999999999999875 68999999986543 34456778999999999999999999999987665
Q ss_pred -EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccc
Q 008055 344 -HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 422 (579)
Q Consensus 344 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 422 (579)
.|+||||+++++|.+++. ..+++.+++.|+.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+
T Consensus 158 ~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 799999999999998764 2689999999999999999999976 99999999999999986 899999999
Q ss_pred cccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhh
Q 008055 423 ASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAK 502 (579)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (579)
++..... ....+|+.|+|||++.+. ++.++|||||||++|+|++|..||...... .....
T Consensus 228 a~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~~~~~----- 287 (681)
T 2pzi_A 228 VSRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------GLPED----- 287 (681)
T ss_dssp CEETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------SCCTT-----
T ss_pred chhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-----------ccccc-----
Confidence 9876443 345678899999998765 488999999999999999999888642110 00000
Q ss_pred hcCccccCCCChhhHHHHHHHHHhcCCCCCCCCC-ChHHHHHHHHHHHHHc
Q 008055 503 MVDPALKGLYPVKSLSRFADVIALCVQPEPEFRP-PMSEVVQALVRLVQRA 552 (579)
Q Consensus 503 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~i~~~~ 552 (579)
......+..+.+++.+||+.||++|| +++++.+.|..++++.
T Consensus 288 --------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 288 --------DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp --------CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred --------ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 00112235788999999999999999 5677777787776543
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-36 Score=304.66 Aligned_cols=226 Identities=22% Similarity=0.348 Sum_probs=177.5
Q ss_pred CCcccc-ceeccCCceEEEEEEe-CCCcEEEEEEeCCCCCCchhHHHHHHHHHHH-hhcCCCCccceeeEEee----CCe
Q 008055 271 GSFNVE-NLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNI-SQLHHPNIMELVGYCSE----YGQ 343 (579)
Q Consensus 271 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~ 343 (579)
++|.+. +.||+|+||.||++.. .+++.||+|++.. ...+.+|+..+ +..+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 356666 7899999999999976 4789999999953 24566777777 56699999999999876 678
Q ss_pred EEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCceEEecc
Q 008055 344 HLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN---ELNPQLSDC 420 (579)
Q Consensus 344 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~---~~~~kl~Df 420 (579)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 89999999999999999742 234689999999999999999999976 9999999999999998 788999999
Q ss_pred cccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCCCCCchhh-hhhhhhccccccChhH
Q 008055 421 GLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLHDIDA 499 (579)
Q Consensus 421 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 499 (579)
|++.... +..++.++|||||||++|||++|+.||........ .....
T Consensus 165 g~a~~~~---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~----------- 212 (299)
T 3m2w_A 165 GFAKETT---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----------- 212 (299)
T ss_dssp TTCEECT---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC-----------
T ss_pred ccccccc---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH-----------
Confidence 9986432 24578899999999999999999999965432110 00000
Q ss_pred HhhhcCccccCCCC----hhhHHHHHHHHHhcCCCCCCCCCChHHHHHH
Q 008055 500 LAKMVDPALKGLYP----VKSLSRFADVIALCVQPEPEFRPPMSEVVQA 544 (579)
Q Consensus 500 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 544 (579)
.... .....+ ...+.++.+++.+||+.||++|||+.|+++.
T Consensus 213 ---~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 ---RIRM-GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp ---SSCT-TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHhh-ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 000111 2345789999999999999999999999863
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-37 Score=322.56 Aligned_cols=242 Identities=15% Similarity=0.158 Sum_probs=179.4
Q ss_pred CccccceeccCCceEEEEEEe-CCCcEEEEEEeCCCC-CCchhHHHHHHHHHHHhhcCC-CCcccee-------------
Q 008055 272 SFNVENLLGEGTFGRVYRAQF-ADGKVLAVKKIDSSA-LPSEMCDDFIEMVSNISQLHH-PNIMELV------------- 335 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h-~niv~l~------------- 335 (579)
.|...+.||+|+||.||+|.+ .+|+.||||++.... ......+.+.+|+.+++.++| +|...+.
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 477788999999999999985 579999999987433 223346778999999999977 3221111
Q ss_pred --------eEEee-----CCeEEEEEEecCCCChhhhhccc---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 008055 336 --------GYCSE-----YGQHLLVYEFRKNGSLHDFLHLS---DEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVH 399 (579)
Q Consensus 336 --------~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH 399 (579)
.++.. ....+++|+++ +++|.+++... ......+++..++.++.|++.||+|||++ +|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 11111 12356777765 68999888421 22345688889999999999999999976 9999
Q ss_pred cCCCCCCEEEcCCCceEEecccccccCCCCCcccccCCCCCccCcccc----------ccCCCCccchHHhHHHHHHHHH
Q 008055 400 KNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVA----------MSGQYNIKSDVYSFGVVMLELL 469 (579)
Q Consensus 400 ~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~DvwslGv~l~ell 469 (579)
|||||+|||++.++.+||+|||+++..... .....+ ..|+|||++ ....++.++|||||||++|||+
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999999998765432 333455 899999999 5556889999999999999999
Q ss_pred hCCCCCCCCCchhhhhhhhhccccccChhHHhhhcCccccCCCChhhHHHHHHHHHhcCCCCCCCCCChHHHH
Q 008055 470 TGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVV 542 (579)
Q Consensus 470 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 542 (579)
+|+.||........ ....+.. ....+..+.+|+.+||+.||++|||+.+++
T Consensus 312 tg~~Pf~~~~~~~~----------------~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 312 CADLPNTDDAALGG----------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HSSCCCCTTGGGSC----------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HCCCCCCCcchhhh----------------HHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999975432100 0000100 012346799999999999999999988875
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=7.7e-37 Score=311.12 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=182.4
Q ss_pred hCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCC------CchhHHHHHHHHHHHhhcC---------CCCccce
Q 008055 270 TGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSAL------PSEMCDDFIEMVSNISQLH---------HPNIMEL 334 (579)
Q Consensus 270 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l 334 (579)
.++|++.+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 34688899999999999999987 689999999976532 2334577888999888875 6666665
Q ss_pred eeE-----------------Eee-------------CCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHH
Q 008055 335 VGY-----------------CSE-------------YGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTAR 384 (579)
Q Consensus 335 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 384 (579)
.+. +.+ .+..++||||+++|++.+.+. ...+++..++.|+.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHH
Confidence 554 332 688999999999997766663 245799999999999999
Q ss_pred HHHHHH-hcCCCCeEEcCCCCCCEEEcCCC--------------------ceEEecccccccCCCCCcccccCCCCCccC
Q 008055 385 ALEYLH-EVCSLSVVHKNIKSANILLDNEL--------------------NPQLSDCGLASNMPNADEALNNDAGSGYGA 443 (579)
Q Consensus 385 ~L~~LH-~~~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~a 443 (579)
||+||| ++ +|+||||||+|||++.++ .+||+|||+++..... ...+|..|+|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~a 245 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTC
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccC
Confidence 999999 77 999999999999999887 8999999999865432 3467889999
Q ss_pred ccccccCCCCccchHHhHHHH-HHHHHhCCCCCCCCCchhhhhhhhhccccccChhHHhhhc--CccccCCCChhhHHHH
Q 008055 444 PEVAMSGQYNIKSDVYSFGVV-MLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMV--DPALKGLYPVKSLSRF 520 (579)
Q Consensus 444 PE~~~~~~~~~~~DvwslGv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 520 (579)
||++.+.. +.++||||||++ .+++++|..||..... ..... ..+.... ........+...+.++
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLT----------DKMLKQMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHH----------HHHHHTCCCSSCCCSHHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHH----------HhhhhhhccCcccchhhhhhcCHHH
Confidence 99998666 899999998777 7888889999842100 00000 0000000 0000111134567889
Q ss_pred HHHHHhcCCCCCCCCCChHHHH
Q 008055 521 ADVIALCVQPEPEFRPPMSEVV 542 (579)
Q Consensus 521 ~~li~~cl~~dP~~Rps~~evl 542 (579)
.+|+.+||+.| |+.|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.2e-30 Score=280.20 Aligned_cols=187 Identities=15% Similarity=0.026 Sum_probs=129.5
Q ss_pred eeccCCceEEEEEE-eCCCcEEEEEEeCCCCCC--------chhHHHHHHHHHHHhhc-CCCCccceeeEEeeCCeEEEE
Q 008055 278 LLGEGTFGRVYRAQ-FADGKVLAVKKIDSSALP--------SEMCDDFIEMVSNISQL-HHPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 278 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 347 (579)
..+.|++|.+..++ .--|+.+|+|.+.+.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35666776666552 335899999999754321 12346689999999999 799999999999999999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCC
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP 427 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 427 (579)
|||++|++|.++|.. ..+++.. +|+.||+.||+|||++ |||||||||+|||++++|.+||+|||+++...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999963 3445543 5899999999999976 99999999999999999999999999998765
Q ss_pred CCC-cccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCC
Q 008055 428 NAD-EALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPF 475 (579)
Q Consensus 428 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~ 475 (579)
... ...+..+|++|||||++.+ .+..++|+||+|+++++|.++..++
T Consensus 391 ~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 432 2334567889999999865 5677899999999998887665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=2.9e-27 Score=254.38 Aligned_cols=184 Identities=13% Similarity=0.157 Sum_probs=146.4
Q ss_pred ccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCch------hHHHHHHHHHHHhhcCCCCccceeeEEeeCCeEEEEE
Q 008055 275 VENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSE------MCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 275 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 348 (579)
..+.||+|+||.||+|.. .++.+++|+......... ..+.+.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356899999999999954 578889998755443221 1345789999999999999997777777778889999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCC
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN 428 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 428 (579)
||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999863 457999999999999976 9999999999999999 999999999987755
Q ss_pred CCcc--------cccCCCCCccCcccccc--CCCCccchHHhHHHHHHHHHhCCCCCC
Q 008055 429 ADEA--------LNNDAGSGYGAPEVAMS--GQYNIKSDVYSFGVVMLELLTGRKPFD 476 (579)
Q Consensus 429 ~~~~--------~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~elltg~~p~~ 476 (579)
.... ....+|+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 23457889999999986 668889999999999998888777663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=3.3e-24 Score=211.55 Aligned_cols=155 Identities=12% Similarity=0.083 Sum_probs=123.0
Q ss_pred HHHHHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCc----------------hhHHHHHHHHHHHhhc
Q 008055 263 IADLQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPS----------------EMCDDFIEMVSNISQL 326 (579)
Q Consensus 263 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l 326 (579)
+..+......|.+.+.||+|+||.||+|...+|+.||+|.+....... .....+.+|+.+++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 344455566778889999999999999988889999999996533211 1356788999999999
Q ss_pred CCCCccceeeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 008055 327 HHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSAN 406 (579)
Q Consensus 327 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~N 406 (579)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 8 4 666665543 56699999999999998 421 12457999999999999976 99999999999
Q ss_pred EEEcCCCceEEecccccccCCCCCcccccCCCCCccCccccc
Q 008055 407 ILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAM 448 (579)
Q Consensus 407 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~ 448 (579)
||++ ++.+||+|||++... ..|+|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~~------------~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVEV------------GEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEET------------TSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeEC------------CCCCHHHHHH
Confidence 9999 999999999998643 3478999874
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.4e-19 Score=176.16 Aligned_cols=139 Identities=19% Similarity=0.170 Sum_probs=106.4
Q ss_pred CccccceeccCCceEEEEEEe-CCCcE--EEEEEeCCCCCCc----------------------hhHHHHHHHHHHHhhc
Q 008055 272 SFNVENLLGEGTFGRVYRAQF-ADGKV--LAVKKIDSSALPS----------------------EMCDDFIEMVSNISQL 326 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~e~~~l~~l 326 (579)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|+..+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999987 68888 9999975432110 1123578899999999
Q ss_pred CCCCc--cceeeEEeeCCeEEEEEEecCC-C----ChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeE
Q 008055 327 HHPNI--MELVGYCSEYGQHLLVYEFRKN-G----SLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLH-EVCSLSVV 398 (579)
Q Consensus 327 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ii 398 (579)
.|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 88864 333332 357899999942 4 66665431 224457789999999999999 66 999
Q ss_pred EcCCCCCCEEEcCCCceEEecccccccC
Q 008055 399 HKNIKSANILLDNELNPQLSDCGLASNM 426 (579)
Q Consensus 399 H~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 426 (579)
||||||+|||++. .++|+|||++...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999998754
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.71 E-value=6.6e-18 Score=170.86 Aligned_cols=145 Identities=11% Similarity=0.135 Sum_probs=100.7
Q ss_pred HHHHhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCC------------chhHHHHH--------HHHHHHhh
Q 008055 266 LQMATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALP------------SEMCDDFI--------EMVSNISQ 325 (579)
Q Consensus 266 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~--------~e~~~l~~ 325 (579)
+.....-|.+.+.||+|+||.||+|...+|+.||||+++..... ........ .|...|.+
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 33333448999999999999999999999999999997542110 00111222 34455555
Q ss_pred cCCCCccceeeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCC
Q 008055 326 LHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSA 405 (579)
Q Consensus 326 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~ 405 (579)
+.+..+....-+.. ...++||||++|++|..+... .....++.|++.+|.|||++ |||||||||.
T Consensus 170 L~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~ 234 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEF 234 (397)
T ss_dssp HHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred HHhcCCCCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHH
Confidence 54333221111111 234799999999888765421 12456889999999999976 9999999999
Q ss_pred CEEEcCCCc----------eEEeccccccc
Q 008055 406 NILLDNELN----------PQLSDCGLASN 425 (579)
Q Consensus 406 Nill~~~~~----------~kl~Dfg~~~~ 425 (579)
|||+++++. +.|+||+.+-.
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCccc
Confidence 999988763 89999997654
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.51 E-value=1.1e-14 Score=163.92 Aligned_cols=107 Identities=27% Similarity=0.500 Sum_probs=94.8
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|+|+|.+|..|+++++|+.|+|++|+|+|.+|..|++|++|+.|||++|+|+|.+|. +..++ |+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 36799999999999999999999999999999999999999999999999999999999999999875 77776 99999
Q ss_pred cccCcCCCCCccc--cccC-eeeccCCCCCCC
Q 008055 79 IANNRFTGWVPEQ--LKNI-NLQKDGNSWSSG 107 (579)
Q Consensus 79 l~~N~l~~~~p~~--l~~~-~~~~~~n~~~~~ 107 (579)
|++|+|+|.+|.. +..+ ...+.+|+..|+
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcC
Confidence 9999999999964 4444 345778874443
No 257
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.45 E-value=1.9e-13 Score=129.35 Aligned_cols=93 Identities=19% Similarity=0.303 Sum_probs=62.8
Q ss_pred CCcEEeccCCcCCCCch-hhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 3 TLKYLNIAHNQLQGQLN-DMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
.+++|+|++|+|++..| ..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45677777777775543 3466777777777777777766666677777777777777777776654 55554 777777
Q ss_pred ccCcCCCCCccccccC
Q 008055 80 ANNRFTGWVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~ 95 (579)
++|.|++..|..+..+
T Consensus 113 s~N~l~~~~~~~~~~l 128 (220)
T 2v70_A 113 RSNRITCVGNDSFIGL 128 (220)
T ss_dssp TTSCCCCBCTTSSTTC
T ss_pred CCCcCCeECHhHcCCC
Confidence 7777776666655544
No 258
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.41 E-value=4.3e-13 Score=123.99 Aligned_cols=104 Identities=27% Similarity=0.446 Sum_probs=87.5
Q ss_pred CCCcEEeccCCcCCCCchh-hhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQLQGQLND-MFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
.+|++|+|++|+|++..+. .|+.+++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 3789999999999976664 489999999999999999998899999999999999999999998865 66675 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|+|++.+|..+..+ .+...+|.+.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 99999999888877655 3445555544
No 259
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.41 E-value=5.1e-13 Score=126.37 Aligned_cols=105 Identities=23% Similarity=0.302 Sum_probs=87.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 4689999999999977777899999999999999999988899999999999999999999988765 56665 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.|++..|..+..+ .+...+|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 142 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQT 142 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCE
Confidence 9999998888777655 34455565544
No 260
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.39 E-value=4.7e-13 Score=123.78 Aligned_cols=89 Identities=28% Similarity=0.349 Sum_probs=82.8
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 57899999999999999999999999999999999999998888899999999999999999998764 77775 99999
Q ss_pred cccCcCCCCCc
Q 008055 79 IANNRFTGWVP 89 (579)
Q Consensus 79 l~~N~l~~~~p 89 (579)
|++|+|++..+
T Consensus 133 L~~N~l~c~c~ 143 (192)
T 1w8a_A 133 LASNPFNCNCH 143 (192)
T ss_dssp CTTCCBCCSGG
T ss_pred eCCCCccCcCc
Confidence 99999998876
No 261
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=121.45 Aligned_cols=103 Identities=22% Similarity=0.267 Sum_probs=84.4
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 47899999999998 7788999999999999999999988788899999999999999999998864 77775 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
++|.|++..+..+..+ .+...+|++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 9999996655555544 3444555543
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.38 E-value=1.5e-12 Score=123.86 Aligned_cols=104 Identities=27% Similarity=0.323 Sum_probs=88.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 5799999999999998899999999999999999999866667789999999999999999998865 56665 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.|+ .+|..+..+ .+...+|.+..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 149 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKS 149 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCC
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCc
Confidence 999999 778766554 44555665553
No 263
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=1.1e-12 Score=118.72 Aligned_cols=84 Identities=29% Similarity=0.360 Sum_probs=39.5
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEcc
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIA 80 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~ 80 (579)
+|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++. +..++ |+.|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 344455555555444444444455555555555555443333344445555555555555444432 33332 4455555
Q ss_pred cCcCCC
Q 008055 81 NNRFTG 86 (579)
Q Consensus 81 ~N~l~~ 86 (579)
+|+|++
T Consensus 111 ~N~~~c 116 (170)
T 3g39_A 111 NNPWDC 116 (170)
T ss_dssp SSCBCT
T ss_pred CCCCCC
Confidence 554443
No 264
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=1.5e-12 Score=118.19 Aligned_cols=86 Identities=19% Similarity=0.275 Sum_probs=48.0
Q ss_pred cEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEcccC
Q 008055 5 KYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIANN 82 (579)
Q Consensus 5 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~~N 82 (579)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666664 4554432 5566666666666655555666666666666666666665543 34443 666666666
Q ss_pred cCCCCCccccc
Q 008055 83 RFTGWVPEQLK 93 (579)
Q Consensus 83 ~l~~~~p~~l~ 93 (579)
+|++..+..+.
T Consensus 92 ~l~~l~~~~~~ 102 (174)
T 2r9u_A 92 HLKSIPRGAFD 102 (174)
T ss_dssp CCCCCCTTTTT
T ss_pred ccceeCHHHhc
Confidence 66644443333
No 265
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.34 E-value=4.6e-12 Score=115.37 Aligned_cols=104 Identities=23% Similarity=0.394 Sum_probs=81.5
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|+.|+|++|++++..+..|+.+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 5789999999999977777788999999999999999976666788999999999999999988765 56665 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
++|.|++..+..+..+ .+...+|.+.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 9999986555444433 3444555443
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.34 E-value=3.7e-12 Score=123.01 Aligned_cols=106 Identities=28% Similarity=0.395 Sum_probs=90.1
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 57899999999999998888899999999999999999987778889999999999999999988865 56665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..|..+..+ .+...+|.+..
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 99999997777666554 44555665553
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.33 E-value=3.8e-12 Score=120.34 Aligned_cols=104 Identities=23% Similarity=0.301 Sum_probs=84.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 46899999999999988899999999999999999999965556678899999999999999998754 66775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSW 104 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~ 104 (579)
|++|.|++..+..+..+ .+...+|++
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99999997777666544 334445544
No 268
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.31 E-value=8.3e-12 Score=118.77 Aligned_cols=93 Identities=25% Similarity=0.329 Sum_probs=58.8
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+..+..+..++ |+.|+|
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLAL 142 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEEC
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEEC
Confidence 3566677777777765545556667777777777777765555556666777777777777765554455543 677777
Q ss_pred ccCcCCCCCccccc
Q 008055 80 ANNRFTGWVPEQLK 93 (579)
Q Consensus 80 ~~N~l~~~~p~~l~ 93 (579)
++|.|++..+..+.
T Consensus 143 ~~N~l~~~~~~~~~ 156 (229)
T 3e6j_A 143 DQNQLKSIPHGAFD 156 (229)
T ss_dssp CSSCCCCCCTTTTT
T ss_pred CCCcCCccCHHHHh
Confidence 77777654444443
No 269
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.31 E-value=1.5e-12 Score=146.44 Aligned_cols=82 Identities=30% Similarity=0.541 Sum_probs=66.9
Q ss_pred CCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEcccCcCCCCCccccccC----eee
Q 008055 25 LPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIANNRFTGWVPEQLKNI----NLQ 98 (579)
Q Consensus 25 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~~N~l~~~~p~~l~~~----~~~ 98 (579)
+++|+.|||++|+|+|.+|..|++|++|+.|+|++|+|+|.+|. +..++ |+.|||++|+++|.+|..+..+ .+.
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 56788888888888899999999999999999999999988865 77776 9999999999999999887766 344
Q ss_pred ccCCCCCC
Q 008055 99 KDGNSWSS 106 (579)
Q Consensus 99 ~~~n~~~~ 106 (579)
...|.+.+
T Consensus 711 ls~N~l~g 718 (768)
T 3rgz_A 711 LSNNNLSG 718 (768)
T ss_dssp CCSSEEEE
T ss_pred CcCCcccc
Confidence 55555543
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.31 E-value=8.4e-12 Score=120.51 Aligned_cols=105 Identities=24% Similarity=0.325 Sum_probs=89.4
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|+.|+|++|++++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 4689999999999998888999999999999999999998888899999999999999999988864 66675 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.|++..+..+..+ .+...+|.+..
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 9999997776655444 34455565543
No 271
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.31 E-value=8.5e-12 Score=116.77 Aligned_cols=104 Identities=26% Similarity=0.356 Sum_probs=84.0
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|+|++..+..|+.+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 5789999999999977777789999999999999999976666788999999999999999988765 56665 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
++|.|++..+..+..+ .+...+|.+.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 9999997766555444 3444555544
No 272
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.30 E-value=3.9e-12 Score=120.25 Aligned_cols=106 Identities=20% Similarity=0.320 Sum_probs=93.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 57899999999999988888999999999999999999988888899999999999999999998754 77775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..|..+..+ .+...+|++.|
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 99999999888877765 45666777654
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.29 E-value=1.1e-11 Score=121.20 Aligned_cols=106 Identities=27% Similarity=0.365 Sum_probs=88.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|.|++..+..|+.+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 57899999999999988888899999999999999999987777889999999999999999988865 56665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..|..+..+ .+...+|.+.+
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999998777655544 34455565543
No 274
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.28 E-value=5.6e-12 Score=116.55 Aligned_cols=89 Identities=29% Similarity=0.389 Sum_probs=81.1
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 57899999999999988888999999999999999999988888999999999999999999988864 66675 99999
Q ss_pred cccCcCCCCCc
Q 008055 79 IANNRFTGWVP 89 (579)
Q Consensus 79 l~~N~l~~~~p 89 (579)
|++|+|.+...
T Consensus 133 L~~N~~~C~c~ 143 (193)
T 2wfh_A 133 IGANPLYCDCN 143 (193)
T ss_dssp CCSSCEECSGG
T ss_pred eCCCCeecCCc
Confidence 99999986543
No 275
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=1.8e-11 Score=118.95 Aligned_cols=144 Identities=15% Similarity=0.070 Sum_probs=110.7
Q ss_pred HhCCccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEeeCCeEEEE
Q 008055 269 ATGSFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 269 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 347 (579)
.-..|++...++.|+++.||++... +..+++|+....... ....+.+|+.+++.+. +..+.++++++.+.+..++|
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 3456888888999999999999754 688999998642211 1235777888888774 67788899999988999999
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC---------------------------------- 393 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------- 393 (579)
|||++|.+|.+.+. +......++.+++++|..||+..
T Consensus 89 ~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 99999999987632 11123468889999999999810
Q ss_pred ----------------------CCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 394 ----------------------SLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 394 ----------------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
...++|+|++|.|||++++..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799999764
No 276
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.27 E-value=1.2e-11 Score=111.78 Aligned_cols=100 Identities=20% Similarity=0.261 Sum_probs=83.9
Q ss_pred CcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEccc
Q 008055 4 LKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIAN 81 (579)
Q Consensus 4 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~~ 81 (579)
.+.|++++|+|+ .+|..+ .++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 577665 48999999999999998899999999999999999999998875 56775 99999999
Q ss_pred CcCCCCCccccccC----eeeccCCCCCC
Q 008055 82 NRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 82 N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|+|++..|..+..+ .+...+|++.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99998777666554 44556666544
No 277
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.27 E-value=7.9e-12 Score=113.79 Aligned_cols=89 Identities=27% Similarity=0.381 Sum_probs=80.4
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|+|++..+..|+.+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 47899999999999987777889999999999999999987777789999999999999999988875 56665 99999
Q ss_pred cccCcCCCCCc
Q 008055 79 IANNRFTGWVP 89 (579)
Q Consensus 79 l~~N~l~~~~p 89 (579)
|++|+|++.+|
T Consensus 131 l~~N~~~~~~~ 141 (177)
T 2o6r_A 131 LHTNPWDCSCP 141 (177)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCeeccCc
Confidence 99999998776
No 278
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.26 E-value=1.8e-11 Score=111.06 Aligned_cols=88 Identities=23% Similarity=0.279 Sum_probs=79.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|+|++..|..|+++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 5799999999999998899999999999999999999976666679999999999999999998875 77775 999999
Q ss_pred ccCcCCCCCc
Q 008055 80 ANNRFTGWVP 89 (579)
Q Consensus 80 ~~N~l~~~~p 89 (579)
++|+|.+..+
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 9999985443
No 279
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.26 E-value=2.8e-12 Score=128.28 Aligned_cols=103 Identities=25% Similarity=0.453 Sum_probs=84.6
Q ss_pred CCCcEEeccCCcCCC--CchhhhCCCCCCCEEeccC-CcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCe
Q 008055 2 KTLKYLNIAHNQLQG--QLNDMFGQLPSLSTLDLSF-NTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDN 76 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~ 76 (579)
.+++.|+|++|+++| .+|..|+++++|+.|+|++ |++++.+|..|+++++|++|+|++|+|++.+|. +..++ |+.
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468889999999998 8888999999999999994 889989999999999999999999999876654 66665 999
Q ss_pred EEcccCcCCCCCccccccC----eeeccCCCC
Q 008055 77 LNIANNRFTGWVPEQLKNI----NLQKDGNSW 104 (579)
Q Consensus 77 l~l~~N~l~~~~p~~l~~~----~~~~~~n~~ 104 (579)
|+|++|.+++.+|..+..+ .+...+|.+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 9999999998888877655 334445544
No 280
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=7.1e-12 Score=127.19 Aligned_cols=87 Identities=23% Similarity=0.185 Sum_probs=61.1
Q ss_pred CCCcEEeccC-CcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCCCCeEEc
Q 008055 2 KTLKYLNIAH-NQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLPLDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~L~~l~l 79 (579)
++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++.+|..|.+|++|+.|+|++|+|++.++. +..++|+.|+|
T Consensus 31 ~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l 110 (347)
T 2ifg_A 31 ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVL 110 (347)
T ss_dssp SCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEEC
T ss_pred CCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCCceEEEe
Confidence 4577777775 777766666777777777777777777776666777777777777777777776654 44445777777
Q ss_pred ccCcCCCCC
Q 008055 80 ANNRFTGWV 88 (579)
Q Consensus 80 ~~N~l~~~~ 88 (579)
++|.|.+..
T Consensus 111 ~~N~~~c~c 119 (347)
T 2ifg_A 111 SGNPLHCSC 119 (347)
T ss_dssp CSSCCCCCG
T ss_pred eCCCccCCC
Confidence 777776543
No 281
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.25 E-value=2.9e-11 Score=118.22 Aligned_cols=104 Identities=26% Similarity=0.369 Sum_probs=87.1
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.+++ + +.++.+++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 62 l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5789999999999996 3 4799999999999999999988888889999999999999999998875 66665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..|..+..+ .+...+|.+..
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 99999998777655544 44555565543
No 282
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.25 E-value=2.1e-11 Score=120.37 Aligned_cols=104 Identities=34% Similarity=0.458 Sum_probs=86.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 578999999999998 7888899999999999999999987778899999999999999999988865 56665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|+|++..+..+..+ .+...+|.+.
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999996555544433 3455566555
No 283
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.24 E-value=4.2e-11 Score=111.97 Aligned_cols=104 Identities=28% Similarity=0.405 Sum_probs=80.3
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 46789999999999876667788899999999999999876666678889999999999999887765 56664 89999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSW 104 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~ 104 (579)
|++|.|++..+..+..+ .+...+|.+
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 99999987666545443 334445543
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.23 E-value=8.8e-12 Score=141.71 Aligned_cols=105 Identities=27% Similarity=0.309 Sum_probs=83.0
Q ss_pred CCCcEEeccCCcCC-----CCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCe
Q 008055 2 KTLKYLNIAHNQLQ-----GQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDN 76 (579)
Q Consensus 2 ~~L~~L~l~~n~l~-----~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~ 76 (579)
++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++.++......|+.
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~ 530 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEI 530 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCE
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccE
Confidence 34555555555554 3334568889999999999999999888889999999999999999999886543455999
Q ss_pred EEcccCcCCCCCccccccC-eeeccCCCCCC
Q 008055 77 LNIANNRFTGWVPEQLKNI-NLQKDGNSWSS 106 (579)
Q Consensus 77 l~l~~N~l~~~~p~~l~~~-~~~~~~n~~~~ 106 (579)
|+|++|+|++.+|..+..+ .+...+|++.|
T Consensus 531 L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 531 LDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561 (844)
T ss_dssp EEEEEECCCCCCSCCCSSCCEEEEEEECCCC
T ss_pred EECCCCcCCCCChhHhCCcCEEEecCCCccc
Confidence 9999999999999888777 45666777655
No 285
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.23 E-value=5.7e-12 Score=125.95 Aligned_cols=95 Identities=37% Similarity=0.679 Sum_probs=82.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCC--CCCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANL--PLDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~--~L~~l 77 (579)
|++|++|+|++|++++.+|..|+.+++|+.|+|++|.|++.+|..|..+++|+.|+|++|+|++.+| .+..+ .|+.|
T Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L 179 (313)
T 1ogq_A 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179 (313)
T ss_dssp CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEE
T ss_pred CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEE
Confidence 5789999999999998899999999999999999999999999999999999999999999997665 36555 48999
Q ss_pred EcccCcCCCCCccccccC
Q 008055 78 NIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 78 ~l~~N~l~~~~p~~l~~~ 95 (579)
+|++|.+++.+|..+..+
T Consensus 180 ~L~~N~l~~~~~~~~~~l 197 (313)
T 1ogq_A 180 TISRNRLTGKIPPTFANL 197 (313)
T ss_dssp ECCSSEEEEECCGGGGGC
T ss_pred ECcCCeeeccCChHHhCC
Confidence 999999998888877665
No 286
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.22 E-value=2e-11 Score=122.90 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=81.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|+|+ .+|..|+.+++|+.|+|++|.|++ +|..+..+++|+.|+|++|++.+.+|. +..++ |+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 467888999999888 788888888999999999999884 677788888999999998888887764 66665 88999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|++.+.+|..+..+ .+...+|+..
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 99988888888777655 3444555544
No 287
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.22 E-value=4.5e-11 Score=116.71 Aligned_cols=105 Identities=29% Similarity=0.381 Sum_probs=88.2
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.+++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 57899999999999987778889999999999999999988888899999999999999999988765 66665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|.+++..+..+..+ .+...+|.+.
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 99999997776656544 3445556554
No 288
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.21 E-value=7.2e-12 Score=110.55 Aligned_cols=102 Identities=24% Similarity=0.350 Sum_probs=81.4
Q ss_pred CCCcEEeccCCcCC-CCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQLQ-GQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
++|+.|+|++|.++ +.+|..++.+++|+.|+|++|.|++. ..+.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46899999999998 78888889999999999999999965 7889999999999999999996554 55454 99999
Q ss_pred cccCcCCCC-CccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGW-VPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~-~p~~l~~~----~~~~~~n~~~ 105 (579)
+++|.+++. .|..+..+ .+...+|.+.
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 999999873 33555544 3445555544
No 289
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.20 E-value=1.6e-11 Score=110.63 Aligned_cols=102 Identities=23% Similarity=0.350 Sum_probs=78.7
Q ss_pred CCCcEEeccCCcCC-CCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQLQ-GQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 78888888899999999999999865 7888899999999999999986554 44454 99999
Q ss_pred cccCcCCCCCc-cccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVP-EQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p-~~l~~~----~~~~~~n~~~ 105 (579)
|++|.|++..+ ..+..+ .+...+|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 99999986432 445444 3444555544
No 290
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.20 E-value=3e-11 Score=132.66 Aligned_cols=105 Identities=24% Similarity=0.241 Sum_probs=85.6
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
+++++|||++|+|++..|..|.+|++|+.|||++|+|++..|..|.+|++|++|+|++|+|++.++. |..+. |+.|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 3689999999999977778899999999999999999977777899999999999999999988764 77775 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|+|++..+..+..+ .+...+|.+..
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~ 162 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQS 162 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCcccc
Confidence 9999987666666554 34445555543
No 291
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.19 E-value=7.1e-11 Score=116.58 Aligned_cols=103 Identities=29% Similarity=0.344 Sum_probs=84.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.|++. +. .+.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 54 l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 57899999999999954 43 388999999999999999 7899999999999999999999998854 77775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..+..+..+ .+...+|.+..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 99999997766655443 34455565543
No 292
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.19 E-value=5.1e-11 Score=119.83 Aligned_cols=103 Identities=23% Similarity=0.316 Sum_probs=89.6
Q ss_pred CCCCcEEeccCCcCCCCchhhhCC---------CCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCC
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQ---------LPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLAN 71 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~---------l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 71 (579)
|++|++|+|++|++.+.+|..++. +++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++.++.+..
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~ 227 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHH 227 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhcc
Confidence 578999999999999999988765 999999999999999 8999999999999999999999998887877
Q ss_pred CC-CCeEEcccCcCCCCCccccccC----eeeccCCCC
Q 008055 72 LP-LDNLNIANNRFTGWVPEQLKNI----NLQKDGNSW 104 (579)
Q Consensus 72 ~~-L~~l~l~~N~l~~~~p~~l~~~----~~~~~~n~~ 104 (579)
++ |+.|+|++|.+.+.+|..+..+ .+...+|..
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 265 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSN 265 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTT
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCc
Confidence 75 9999999999999999887665 334444444
No 293
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.18 E-value=1.9e-11 Score=107.87 Aligned_cols=87 Identities=25% Similarity=0.320 Sum_probs=78.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcc--cccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTI--DVLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~~-L~~l 77 (579)
+++|++|+|++|.+++. ..|+.+++|+.|+|++|.|++.+|..+..+++|+.|+|++|+|++.+ ..+..++ |+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 57899999999999976 78999999999999999999889988888999999999999999965 5577776 9999
Q ss_pred EcccCcCCCCCc
Q 008055 78 NIANNRFTGWVP 89 (579)
Q Consensus 78 ~l~~N~l~~~~p 89 (579)
++++|.+++..+
T Consensus 119 ~l~~N~l~~~~~ 130 (149)
T 2je0_A 119 DLFNCEVTNLND 130 (149)
T ss_dssp ECTTCGGGGSTT
T ss_pred eCcCCcccchHH
Confidence 999999997665
No 294
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.18 E-value=2.5e-11 Score=123.86 Aligned_cols=105 Identities=27% Similarity=0.341 Sum_probs=84.2
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
|++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+ .+..++ |+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 5789999999999998778889999999999999999997777789999999999999999998765 477775 99999
Q ss_pred cccCcCCCCCcccc------ccC-eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQL------KNI-NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l------~~~-~~~~~~n~~~ 105 (579)
|++|.|++..+..+ ..+ .+...+|.+.
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99999986544443 222 3445555554
No 295
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.17 E-value=8.2e-11 Score=115.79 Aligned_cols=95 Identities=27% Similarity=0.364 Sum_probs=70.9
Q ss_pred CCCCcEEeccCCc-CCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQ-LQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l 77 (579)
|++|++|+|++|. +....|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 4678888888886 7766677788888888888888888877777788888888888888888877654 55554 8888
Q ss_pred EcccCcCCCCCccccccC
Q 008055 78 NIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 78 ~l~~N~l~~~~p~~l~~~ 95 (579)
+|++|.|++..+..+..+
T Consensus 159 ~l~~n~l~~~~~~~~~~l 176 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGL 176 (285)
T ss_dssp ECCSSCCCEECTTTTTTC
T ss_pred ECCCCcccccCHHHhcCc
Confidence 888888876555545443
No 296
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.17 E-value=4e-11 Score=129.41 Aligned_cols=100 Identities=33% Similarity=0.445 Sum_probs=86.6
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEccc
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNIAN 81 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l~~ 81 (579)
.|+.|+|++|+|++ +|. |+.|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++.+ .+..++ |+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCC
Confidence 58899999999996 676 999999999999999999 89999999999999999999999954 777775 99999999
Q ss_pred CcCCCCC-ccccccC----eeeccCCCCCC
Q 008055 82 NRFTGWV-PEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 82 N~l~~~~-p~~l~~~----~~~~~~n~~~~ 106 (579)
|.|++.+ |..+..+ .+...+|.+.+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 9999887 8877666 45556666554
No 297
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.17 E-value=5.3e-11 Score=115.33 Aligned_cols=135 Identities=21% Similarity=0.200 Sum_probs=98.0
Q ss_pred ccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCC--ccceeeEEeeCCeEEEEEEe
Q 008055 273 FNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPN--IMELVGYCSEYGQHLLVYEF 350 (579)
Q Consensus 273 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~ 350 (579)
+.+..+.+.|..+.||++...+|..+++|...... ...+..|+..++.+.+.+ +.+++++....+..++||||
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 44333334566699999987778889999976531 234667888887775444 45688888887889999999
Q ss_pred cCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 008055 351 RKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC------------------------------------- 393 (579)
Q Consensus 351 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------- 393 (579)
++|.+|. .. . .. ...++.++++.|..||...
T Consensus 97 i~G~~l~--~~---~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 97 VPGQDLL--SS---H----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp CSSEETT--TS---C----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred cCCcccC--cC---c----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 9998884 21 0 11 2356778888888888641
Q ss_pred ------------------CCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 394 ------------------SLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 394 ------------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
...++|+|++|.|||+++++.+.|+||+.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877666799999864
No 298
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.17 E-value=1.3e-10 Score=113.38 Aligned_cols=106 Identities=24% Similarity=0.299 Sum_probs=88.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.|+...+..|..+++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 57899999999999977677789999999999999999977777889999999999999999998865 66775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..+..+..+ .+...+|.+..
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 99999997666555544 34445555443
No 299
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.16 E-value=6.4e-11 Score=120.85 Aligned_cols=105 Identities=23% Similarity=0.264 Sum_probs=89.5
Q ss_pred CCCcEEeccCCcCCCCchhhhC-CCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFG-QLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
..|+.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..+. |+.|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4589999999999988888887 999999999999999987778899999999999999999988764 67775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.|++..|..+..+ .+...+|.+..
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 99999998878777655 34455565544
No 300
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.16 E-value=3.9e-11 Score=108.13 Aligned_cols=87 Identities=26% Similarity=0.369 Sum_probs=78.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcc--cccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTI--DVLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~~-L~~l 77 (579)
+++|++|+|++|.|++. ..|+.+++|+.|+|++|+|++.+|..+.++++|+.|+|++|+|++.+ +.+..++ |+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 46899999999999976 78999999999999999999888988888999999999999999976 5677776 9999
Q ss_pred EcccCcCCCCCc
Q 008055 78 NIANNRFTGWVP 89 (579)
Q Consensus 78 ~l~~N~l~~~~p 89 (579)
++++|.+++..+
T Consensus 126 ~l~~N~l~~~~~ 137 (168)
T 2ell_A 126 DLFNCEVTNLND 137 (168)
T ss_dssp ECCSSGGGTSTT
T ss_pred EeeCCcCcchHH
Confidence 999999997655
No 301
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.16 E-value=5.4e-11 Score=125.30 Aligned_cols=105 Identities=21% Similarity=0.304 Sum_probs=88.3
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|+.|+|++|.+++.+|..|+.+++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 5789999999999988899999999999999999999988888999999999999999999887654 66675 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.+++..|..+..+ .+...+|.+..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcccccChhhccccccccEEECCCCcccc
Confidence 9999998888777655 34555665554
No 302
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.16 E-value=3.9e-11 Score=131.75 Aligned_cols=105 Identities=30% Similarity=0.378 Sum_probs=76.2
Q ss_pred CCCcEEeccCCcC-CCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQL-QGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l-~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
++|+.|+|++|++ .+.+|+.|..+++|+.|+|++|+|++.+|..|.+|++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 5677777777764 345677778888888888888888877777888888888888888888877754 66664 88888
Q ss_pred cccCcCCCCCccccccC-----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI-----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~-----~~~~~~n~~~~ 106 (579)
|++|+|++..|..+..+ .+...+|++.|
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 88888887777766543 23445565544
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.15 E-value=3.9e-11 Score=119.42 Aligned_cols=106 Identities=27% Similarity=0.385 Sum_probs=86.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCC-CCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSG-NLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l 77 (579)
+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|+|++.++ .+..++ |+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 4689999999999998888889999999999999999986 588889999999999999999998865 466665 9999
Q ss_pred EcccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 78 NIANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 78 ~l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
+|++|.+++..+..+..+ .+...+|.+.+
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 999999987766555443 34455555543
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.15 E-value=5.3e-11 Score=117.13 Aligned_cols=106 Identities=26% Similarity=0.355 Sum_probs=90.6
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|.+++..|..|.++++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 57899999999999988899999999999999999999977777799999999999999999988764 66665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|.+++..|..+..+ .+...+|.+..
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 99999999888877655 34555565543
No 305
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.15 E-value=5.3e-11 Score=110.32 Aligned_cols=87 Identities=17% Similarity=0.252 Sum_probs=68.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcc-cccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTI-DVLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-L~~l~ 78 (579)
+++|++|+|++|.++ .++.+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++.. ..+..++ |+.|+
T Consensus 65 l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 467889999999776 2346888899999999999998778888888999999999999988754 3466665 89999
Q ss_pred cccCcCCCCCc
Q 008055 79 IANNRFTGWVP 89 (579)
Q Consensus 79 l~~N~l~~~~p 89 (579)
|++|.+-+.+|
T Consensus 143 L~~n~~i~~~~ 153 (197)
T 4ezg_A 143 LSYNGAITDIM 153 (197)
T ss_dssp CCSCTBCCCCG
T ss_pred ccCCCCccccH
Confidence 99998333455
No 306
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.15 E-value=4.3e-11 Score=129.16 Aligned_cols=86 Identities=28% Similarity=0.376 Sum_probs=79.4
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCc--ccccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGT--IDVLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-L~~l 77 (579)
|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|++|++|+.|+|++|+|++. ++.+..++ |+.|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 578999999999999 889999999999999999999996 77 899999999999999999999 45687776 9999
Q ss_pred EcccCcCCCCCc
Q 008055 78 NIANNRFTGWVP 89 (579)
Q Consensus 78 ~l~~N~l~~~~p 89 (579)
+|++|+|++.+|
T Consensus 539 ~L~~N~l~~~~~ 550 (567)
T 1dce_A 539 NLQGNSLCQEEG 550 (567)
T ss_dssp ECTTSGGGGSSS
T ss_pred EecCCcCCCCcc
Confidence 999999998766
No 307
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.13 E-value=2.1e-11 Score=135.70 Aligned_cols=92 Identities=27% Similarity=0.317 Sum_probs=61.3
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|+..+..+..+. |+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeC
Confidence 456666677777666 66666667777777777777776 566667777777777777777765554565554 777777
Q ss_pred ccCcCCCCCcccccc
Q 008055 80 ANNRFTGWVPEQLKN 94 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~ 94 (579)
++|.|++.+|..+..
T Consensus 324 ~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 324 EGNPLEKQFLKILTE 338 (727)
T ss_dssp TTSCCCSHHHHHHHH
T ss_pred CCCccCCCChHHHhh
Confidence 777777666665543
No 308
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.11 E-value=1.7e-10 Score=125.88 Aligned_cols=105 Identities=23% Similarity=0.346 Sum_probs=84.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.|++..|..|+.+++|+.|+|++|.|++..|..|+++++|+.|+|++|.|++.++. +..++ |+.|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46888999999999887778888999999999999999887777888899999999999999887765 46665 89999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|.|++..|..+..+ .+...+|.+.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 99999988877766554 3444455443
No 309
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.11 E-value=1.1e-10 Score=118.23 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=83.2
Q ss_pred cEEeccCC-cCCCCchhhhCCCCCCCEEeccC-CcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEcc
Q 008055 5 KYLNIAHN-QLQGQLNDMFGQLPSLSTLDLSF-NTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIA 80 (579)
Q Consensus 5 ~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~ 80 (579)
..++++++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.++. |..++ |+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 5888 99999999999996 999988888999999999999999999999875 77776 9999999
Q ss_pred cCcCCCCCccccccC---eeeccCCCCCC
Q 008055 81 NNRFTGWVPEQLKNI---NLQKDGNSWSS 106 (579)
Q Consensus 81 ~N~l~~~~p~~l~~~---~~~~~~n~~~~ 106 (579)
+|+|++..|..+..+ .+...+|.+.|
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 999997666666554 33445555544
No 310
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.10 E-value=1.9e-10 Score=112.51 Aligned_cols=105 Identities=24% Similarity=0.251 Sum_probs=79.4
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
++|++|+|++|++++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++ .+..++ |+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 358888898888887777788888888899998888887767788888888888888888888774 366665 888888
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.+++..+..+..+ .+...+|.+..
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccce
Confidence 8888887666555444 33444554443
No 311
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.09 E-value=1.1e-10 Score=129.84 Aligned_cols=102 Identities=24% Similarity=0.277 Sum_probs=78.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
+.+|+.|+|++|.|. .+|..+..|++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|+..+..+..+. |+.|+|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEEC
Confidence 467888888888888 67777778888888888888888 788888888888888888888886655677765 888888
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
++|.|+ .+|..|..+ .+...+|.+.
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 888886 677666655 3344455543
No 312
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.07 E-value=2.9e-10 Score=124.36 Aligned_cols=94 Identities=26% Similarity=0.379 Sum_probs=50.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
++|++|+|++|.+++..|..|+++++|+.|+|++|.|++..|..|++|++|++|+|++|+|++.++ .+..+. |+.|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 455555555555555445555555555555555555555555555555555555555555555442 244443 555555
Q ss_pred ccCcCCC-CCccccccC
Q 008055 80 ANNRFTG-WVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~-~~p~~l~~~ 95 (579)
++|.+++ .+|..+..+
T Consensus 136 ~~n~l~~~~lp~~~~~l 152 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNL 152 (606)
T ss_dssp CSSCCCCCCCCGGGGTC
T ss_pred CCCcccceechHhHhhc
Confidence 5555554 345444433
No 313
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.07 E-value=2.3e-10 Score=120.41 Aligned_cols=106 Identities=25% Similarity=0.351 Sum_probs=86.3
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
+++|++|+|++|++++..|..|+++++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++.++ .+..++ |+.|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 4689999999999998888889999999999999999998888889999999999999999988865 466665 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|++|+|++..+..+..+ .+...+|++.|
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 99999987666555443 44556666544
No 314
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.07 E-value=2.7e-10 Score=111.43 Aligned_cols=95 Identities=27% Similarity=0.404 Sum_probs=63.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
+++|++|+|++|++++..+..|.++++|+.|+|++|.|++..|..|.++++|+.|+|++|++++..+ .+..++ |+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 3567777777777776666667777777777777777776666667777777777777777776654 255554 77777
Q ss_pred cccCcCCCC-CccccccC
Q 008055 79 IANNRFTGW-VPEQLKNI 95 (579)
Q Consensus 79 l~~N~l~~~-~p~~l~~~ 95 (579)
|++|.+++. +|..+..+
T Consensus 131 l~~n~l~~~~l~~~~~~l 148 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNL 148 (276)
T ss_dssp CCSSCCCCCCCCGGGGGC
T ss_pred CcCCccceecCchhhccC
Confidence 777777652 45555443
No 315
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.06 E-value=2.2e-10 Score=113.85 Aligned_cols=106 Identities=25% Similarity=0.387 Sum_probs=89.0
Q ss_pred CCCCcEEeccCCcCCCCch-hhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccC-cc-cccCCCC-CCe
Q 008055 1 MKTLKYLNIAHNQLQGQLN-DMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSG-TI-DVLANLP-LDN 76 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~-~~~~~~~-L~~ 76 (579)
+++|++|+|++|.+++..+ ..|..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++ .+ ..+..++ |+.
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 5789999999999997655 689999999999999999999899999999999999999999997 33 4577775 999
Q ss_pred EEcccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 77 LNIANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 77 l~l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|+|++|.+++..|..+..+ .+...+|.+..
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 9999999998888777654 34455565543
No 316
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.06 E-value=4.2e-10 Score=115.96 Aligned_cols=95 Identities=21% Similarity=0.334 Sum_probs=64.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|.+++..+..|+.+++|+.|+|++|.+++..|..|.++++|+.|+|++|+|+..++. +..++ |+.|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 45677777777777766666777777777777777777766666677777777777777777766554 35554 77777
Q ss_pred cccCcCCCCCccccccC
Q 008055 79 IANNRFTGWVPEQLKNI 95 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~ 95 (579)
|++|.+++..|..+..+
T Consensus 148 L~~n~l~~~~~~~~~~l 164 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQAT 164 (390)
T ss_dssp CCSSCCCBCCTTTTSSC
T ss_pred CCCCccCccChhhccCC
Confidence 77777776655555443
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.05 E-value=1.1e-10 Score=123.95 Aligned_cols=104 Identities=19% Similarity=0.167 Sum_probs=79.1
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCcccc-CCCCCCeeEeecccccCcccccCCCCCCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFS-SLSSLSSLYLQNNQFSGTIDVLANLPLDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l 79 (579)
+++|+.|+|++|.|++..|..|+.+++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++.++......|+.|+|
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L 198 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDL 198 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEEC
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEEC
Confidence 35678888888888888888888888999999999999888888876 78899999999999888755443234899999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
++|.|++.+|. +..+ .+...+|.+.
T Consensus 199 s~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 199 SSNKLAFMGPE-FQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CSSCCCEECGG-GGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCCCHh-HcCCCCccEEEecCCcCc
Confidence 99999875554 4433 3445555554
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.04 E-value=1.2e-10 Score=123.67 Aligned_cols=102 Identities=16% Similarity=0.251 Sum_probs=84.4
Q ss_pred CCCCcEEeccCCcCCCCchhhhC-CCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFG-QLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~ 78 (579)
|++|++|+|++|.|++.+|..|. .+++|+.|+|++|.|++. | .+..+++|+.|+|++|+|++.++.+..++ |+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWIS 220 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEE
Confidence 46899999999999998998887 799999999999999965 3 34569999999999999999888877775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|.|++ +|..+..+ .+...+|.+.
T Consensus 221 Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 221 LRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 99999996 66655443 3444555544
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.04 E-value=1.5e-10 Score=115.46 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=66.8
Q ss_pred CCCCcEEeccCCcCCCCchhhh--CCCCCCCEEeccCCcCCCCCCccccCC-----CCCCeeEeecccccCccc-ccCCC
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMF--GQLPSLSTLDLSFNTLSGNLPQSFSSL-----SSLSSLYLQNNQFSGTID-VLANL 72 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~~~~~-~~~~~ 72 (579)
+++|++|+|++|++++.+|..+ +.+++|+.|+|++|+|++. |..++.+ ++|+.|+|++|+|++.++ .+..+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4578888888888888787765 7788888888888888865 7777776 788888888888887774 46666
Q ss_pred C-CCeEEcccCcCCCC
Q 008055 73 P-LDNLNIANNRFTGW 87 (579)
Q Consensus 73 ~-L~~l~l~~N~l~~~ 87 (579)
+ |+.|+|++|++.|.
T Consensus 173 ~~L~~L~Ls~N~l~~~ 188 (312)
T 1wwl_A 173 PALSTLDLSDNPELGE 188 (312)
T ss_dssp SSCCEEECCSCTTCHH
T ss_pred CCCCEEECCCCCcCcc
Confidence 5 88888888887664
No 320
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.04 E-value=2.9e-10 Score=119.26 Aligned_cols=90 Identities=21% Similarity=0.302 Sum_probs=45.9
Q ss_pred CCCcEEeccCCc-CCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQ-LQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
++|+.|+|++|+ +....+..|.++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 237 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEE
Confidence 455566665533 33222234555555555555555555 344 355555555555555555554432 44443 55555
Q ss_pred cccCcCCCCCccccc
Q 008055 79 IANNRFTGWVPEQLK 93 (579)
Q Consensus 79 l~~N~l~~~~p~~l~ 93 (579)
|++|.|++..|..+.
T Consensus 238 L~~n~l~~~~~~~~~ 252 (440)
T 3zyj_A 238 MIQSQIQVIERNAFD 252 (440)
T ss_dssp CTTCCCCEECTTSST
T ss_pred CCCCceeEEChhhhc
Confidence 555555554444443
No 321
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.04 E-value=3e-10 Score=121.82 Aligned_cols=92 Identities=21% Similarity=0.180 Sum_probs=80.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCC-CCCeEEcc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANL-PLDNLNIA 80 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~l~l~ 80 (579)
++|++|+|++|.+++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++. .+ .|+.|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEecc
Confidence 4789999999999988888999999999999999999988889999999999999999999965544 45 49999999
Q ss_pred cCcCCC-CCccccccC
Q 008055 81 NNRFTG-WVPEQLKNI 95 (579)
Q Consensus 81 ~N~l~~-~~p~~l~~~ 95 (579)
+|.+++ .+|..+..+
T Consensus 99 ~N~l~~~~~p~~~~~l 114 (520)
T 2z7x_B 99 FNAFDALPICKEFGNM 114 (520)
T ss_dssp SSCCSSCCCCGGGGGC
T ss_pred CCccccccchhhhccC
Confidence 999987 577776655
No 322
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.03 E-value=5.5e-10 Score=121.86 Aligned_cols=104 Identities=23% Similarity=0.272 Sum_probs=87.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.|++..|..|+++++|+.|+|++|.|++..+..|+++++|+.|+|++|.|++.++. +..++ |+.|+
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 57899999999999998888999999999999999999965555679999999999999999998874 77775 99999
Q ss_pred cccCcCCCCCccccccC-eeeccCCCC
Q 008055 79 IANNRFTGWVPEQLKNI-NLQKDGNSW 104 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~-~~~~~~n~~ 104 (579)
|++|.|++..+..+..+ .+...+|.+
T Consensus 178 L~~N~l~~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 178 LSSNRLTHVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CTTSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred CcCCCCCCcChhhhhhhhhhhcccCcc
Confidence 99999998766666655 334444443
No 323
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.03 E-value=1.6e-10 Score=104.97 Aligned_cols=100 Identities=21% Similarity=0.290 Sum_probs=76.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCC-CCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccccc-CCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQL-PSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVL-ANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l-~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~-L~~l 77 (579)
+.+|+.|+|++|+++. +|. +..+ ++|+.|+|++|.|++. ..|..+++|+.|+|++|+|++.++.+ ..++ |+.|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3678999999999984 565 4444 4999999999999964 68899999999999999999877553 6665 9999
Q ss_pred EcccCcCCCCCcc--ccccC----eeeccCCCCC
Q 008055 78 NIANNRFTGWVPE--QLKNI----NLQKDGNSWS 105 (579)
Q Consensus 78 ~l~~N~l~~~~p~--~l~~~----~~~~~~n~~~ 105 (579)
+|++|.|+ .+|. .+..+ .+...+|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 99999996 4554 45443 3445566554
No 324
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.03 E-value=4.4e-10 Score=119.09 Aligned_cols=94 Identities=23% Similarity=0.376 Sum_probs=77.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|+.|+|++|+|++..|..|.++++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 4678888999988887788888888899999988888887788888888888888888888887754 56665 888888
Q ss_pred ccCcCCCCCccccccC
Q 008055 80 ANNRFTGWVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~ 95 (579)
++|.+++..|..+..+
T Consensus 112 s~n~i~~~~~~~~~~l 127 (477)
T 2id5_A 112 SENKIVILLDYMFQDL 127 (477)
T ss_dssp TTSCCCEECTTTTTTC
T ss_pred CCCccccCChhHcccc
Confidence 8888887777666544
No 325
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.03 E-value=9.2e-10 Score=112.10 Aligned_cols=142 Identities=15% Similarity=0.176 Sum_probs=104.6
Q ss_pred cceeccCCceEEEEEEeCCCcEEEEEEeC--CCCCCchhHHHHHHHHHHHhhcC--CCCccceeeEEeeC---CeEEEEE
Q 008055 276 ENLLGEGTFGRVYRAQFADGKVLAVKKID--SSALPSEMCDDFIEMVSNISQLH--HPNIMELVGYCSEY---GQHLLVY 348 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 348 (579)
.+.|+.|.++.||+....+ ..+++|+.. ..... .....+.+|+.+++.+. +..+.+++.++.+. +..++||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 5678999999999998764 578888775 32211 12346677888888876 45678888888776 5589999
Q ss_pred EecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 008055 349 EFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC----------------------------------- 393 (579)
Q Consensus 349 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 393 (579)
||++|..+.+.. ...++..++..++.++++.|..||...
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999997775421 224677888899999999999999731
Q ss_pred --------------------CCCeEEcCCCCCCEEEcCCCc--eEEeccccccc
Q 008055 394 --------------------SLSVVHKNIKSANILLDNELN--PQLSDCGLASN 425 (579)
Q Consensus 394 --------------------~~~iiH~Dlkp~Nill~~~~~--~kl~Dfg~~~~ 425 (579)
...++|+|+++.|||++.++. +.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 58999998753
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.02 E-value=3.2e-10 Score=113.03 Aligned_cols=104 Identities=20% Similarity=0.245 Sum_probs=71.1
Q ss_pred CCCCcEEeccCCcCCCC--ch--hhhCCCCCCCEEeccCCcCCCCCCc----cccCCCCCCeeEeecccccCcc-cccCC
Q 008055 1 MKTLKYLNIAHNQLQGQ--LN--DMFGQLPSLSTLDLSFNTLSGNLPQ----SFSSLSSLSSLYLQNNQFSGTI-DVLAN 71 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~--~p--~~~~~l~~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~-~~~~~ 71 (579)
|++|++|+|++|++.+. ++ ..++.+++|+.|+|++|+|+ .+|. .+.++++|+.|+|++|+|++.. +.+..
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 46788999999988653 22 22367888888888888887 3444 2567788888888888888874 33444
Q ss_pred C----CCCeEEcccCcCCCCCccccc-cC-eeeccCCCCCC
Q 008055 72 L----PLDNLNIANNRFTGWVPEQLK-NI-NLQKDGNSWSS 106 (579)
Q Consensus 72 ~----~L~~l~l~~N~l~~~~p~~l~-~~-~~~~~~n~~~~ 106 (579)
+ .|+.|+|++|.|+ .+|..+. .+ .+....|.+.+
T Consensus 247 ~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 247 CMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp CCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred ccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 3 4888888888888 5665442 23 34445555554
No 327
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.02 E-value=2.7e-10 Score=103.42 Aligned_cols=86 Identities=27% Similarity=0.244 Sum_probs=72.6
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc--ccCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID--VLANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-L~~l~ 78 (579)
++|++|+|++|.|++. +.|+.+++|+.|+|++|.|++..|..+..+++|+.|+|++|+|+..++ .+..++ |+.|+
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEE
Confidence 4899999999999965 679999999999999999996544555899999999999999987665 566665 99999
Q ss_pred cccCcCCCCCcc
Q 008055 79 IANNRFTGWVPE 90 (579)
Q Consensus 79 l~~N~l~~~~p~ 90 (579)
+++|+++ .+|.
T Consensus 120 l~~N~i~-~~~~ 130 (176)
T 1a9n_A 120 ILRNPVT-NKKH 130 (176)
T ss_dssp CCSSGGG-GSTT
T ss_pred ecCCCCC-CcHh
Confidence 9999998 4454
No 328
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.02 E-value=5.6e-10 Score=112.25 Aligned_cols=88 Identities=33% Similarity=0.459 Sum_probs=49.5
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
++|++|+|++|.++ .+|..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|+|++.++ .+..++ |+.|+|
T Consensus 171 ~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 247 (330)
T 1xku_A 171 KKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247 (330)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred CCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEEC
Confidence 45666666666665 2443332 556666666666665555566666666666666666665544 244443 666666
Q ss_pred ccCcCCCCCccccc
Q 008055 80 ANNRFTGWVPEQLK 93 (579)
Q Consensus 80 ~~N~l~~~~p~~l~ 93 (579)
++|.|+ .+|..+.
T Consensus 248 ~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 248 NNNKLV-KVPGGLA 260 (330)
T ss_dssp CSSCCS-SCCTTTT
T ss_pred CCCcCc-cCChhhc
Confidence 666665 4554443
No 329
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.02 E-value=1.8e-10 Score=126.64 Aligned_cols=94 Identities=15% Similarity=0.281 Sum_probs=81.1
Q ss_pred CCCCcEEeccCCcCCCC-----------------chhhhC--CCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeeccc
Q 008055 1 MKTLKYLNIAHNQLQGQ-----------------LNDMFG--QLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQ 61 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 61 (579)
|++|++|+|++|.|+|. +|..++ ++++|+.|+|++|+++|.+|..|+++++|+.|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 57899999999999986 999999 99999999999999999999999999999999999998
Q ss_pred -ccC-ccc-ccCCC-------CCCeEEcccCcCCCCCcc--ccccC
Q 008055 62 -FSG-TID-VLANL-------PLDNLNIANNRFTGWVPE--QLKNI 95 (579)
Q Consensus 62 -l~~-~~~-~~~~~-------~L~~l~l~~N~l~~~~p~--~l~~~ 95 (579)
|+| .+| .+..+ .|+.|+|++|.++ .+|. .+..+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 998 554 35443 4899999999998 7887 66555
No 330
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.02 E-value=3.8e-10 Score=118.78 Aligned_cols=92 Identities=20% Similarity=0.295 Sum_probs=50.1
Q ss_pred CCCCcEEeccCC-cCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeE
Q 008055 1 MKTLKYLNIAHN-QLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l 77 (579)
|++|+.|+|++| .+....+..|.++++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++.++. +..++ |+.|
T Consensus 170 l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred CCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 345666666663 3332223345666666666666666663 33 355566666666666666655432 44443 6666
Q ss_pred EcccCcCCCCCcccccc
Q 008055 78 NIANNRFTGWVPEQLKN 94 (579)
Q Consensus 78 ~l~~N~l~~~~p~~l~~ 94 (579)
+|++|.+++..|..+..
T Consensus 248 ~L~~n~l~~~~~~~~~~ 264 (452)
T 3zyi_A 248 WVMNSQVSLIERNAFDG 264 (452)
T ss_dssp ECTTSCCCEECTTTTTT
T ss_pred EeCCCcCceECHHHhcC
Confidence 66666666555544443
No 331
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.02 E-value=9.6e-11 Score=128.80 Aligned_cols=94 Identities=19% Similarity=0.353 Sum_probs=84.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCc-CCC-CCCccccCC------CCCCeeEeecccccCccc--ccC
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNT-LSG-NLPQSFSSL------SSLSSLYLQNNQFSGTID--VLA 70 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~~--~~~ 70 (579)
|++|++|+|++|++.|.+|..|+++++|+.|+|++|+ |+| .+|..++++ ++|+.|+|++|+|+..++ .+.
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~ 327 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQ 327 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHT
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhc
Confidence 5789999999999999999999999999999999998 998 899999887 999999999999996666 688
Q ss_pred CCC-CCeEEcccCcCCCCCccccccC
Q 008055 71 NLP-LDNLNIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 71 ~~~-L~~l~l~~N~l~~~~p~~l~~~ 95 (579)
.++ |+.|+|++|.++|.+| .+..+
T Consensus 328 ~l~~L~~L~L~~N~l~g~ip-~~~~l 352 (636)
T 4eco_A 328 KMKKLGMLECLYNQLEGKLP-AFGSE 352 (636)
T ss_dssp TCTTCCEEECCSCCCEEECC-CCEEE
T ss_pred cCCCCCEEeCcCCcCccchh-hhCCC
Confidence 876 9999999999999999 66554
No 332
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=1.7e-10 Score=129.88 Aligned_cols=93 Identities=23% Similarity=0.386 Sum_probs=73.1
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEec-cCCcCCCC----------------------------------------
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDL-SFNTLSGN---------------------------------------- 41 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l-~~N~l~g~---------------------------------------- 41 (579)
+++.|+|++|+|+|.+|+.|++|++|+.|+| ++|.++|.
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l 403 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403 (876)
T ss_dssp CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHH
Confidence 5678888888888888888888888888888 77655444
Q ss_pred ------------------------------------CCccccCCCCCCeeEeecccccC------------------ccc
Q 008055 42 ------------------------------------LPQSFSSLSSLSSLYLQNNQFSG------------------TID 67 (579)
Q Consensus 42 ------------------------------------~p~~~~~l~~L~~L~l~~N~l~~------------------~~~ 67 (579)
||..|++|++|+.|+|++|+|+| .|+
T Consensus 404 ~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~ 483 (876)
T 4ecn_A 404 LQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE 483 (876)
T ss_dssp HHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCCh
Confidence 77788888888888888888888 445
Q ss_pred ccC--CCC-CCeEEcccCcCCCCCccccccC
Q 008055 68 VLA--NLP-LDNLNIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 68 ~~~--~~~-L~~l~l~~N~l~~~~p~~l~~~ 95 (579)
.+. .++ |+.|+|++|.+.|.+|..+..+
T Consensus 484 ~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred hhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 555 665 8888888888888888777655
No 333
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.01 E-value=5.8e-10 Score=117.39 Aligned_cols=94 Identities=26% Similarity=0.318 Sum_probs=83.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 4789999999999988899999999999999999999988889999999999999999999988865 66675 999999
Q ss_pred ccCcCCCCCccccccC
Q 008055 80 ANNRFTGWVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~ 95 (579)
++|.|++..+..+..+
T Consensus 155 ~~N~l~~~~~~~~~~l 170 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRV 170 (452)
T ss_dssp CSCCCCEECTTTTTTC
T ss_pred CCCCcceeCHhHHhcC
Confidence 9999996665555444
No 334
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.01 E-value=3.8e-10 Score=122.30 Aligned_cols=106 Identities=24% Similarity=0.370 Sum_probs=79.1
Q ss_pred CCCCcEEeccCCcCCCCch-hhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeeccccc-Cccc-ccCCCC-CCe
Q 008055 1 MKTLKYLNIAHNQLQGQLN-DMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFS-GTID-VLANLP-LDN 76 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-~~~~-~~~~~~-L~~ 76 (579)
+++|++|+|++|.+.+..| ..|..+++|+.|+|++|.+++.+|..+.++++|+.|+|++|.++ +.+| .+..++ |+.
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 4678888888888887665 46788888888888888888888888888888888888888887 3444 466665 888
Q ss_pred EEcccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 77 LNIANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 77 l~l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
|+|++|.+++..|..+..+ .+...+|.+.+
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 8888888888777766554 34445554443
No 335
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.01 E-value=5.5e-10 Score=118.38 Aligned_cols=105 Identities=22% Similarity=0.271 Sum_probs=88.2
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.+++..|..|+++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 57899999999999988899999999999999999999966666789999999999999999988764 66675 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|.+++..|..+..+ .+...+|.+.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 99999998877766655 3444455443
No 336
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.00 E-value=6.5e-10 Score=120.43 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=84.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEcc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNIA 80 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l~ 80 (579)
++|++|+|++|.|++..|..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+..++. .++ |+.|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECC
Confidence 5789999999999988888999999999999999999988899999999999999999999965544 554 9999999
Q ss_pred cCcCCC-CCccccccC----eeeccCCCCC
Q 008055 81 NNRFTG-WVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 81 ~N~l~~-~~p~~l~~~----~~~~~~n~~~ 105 (579)
+|.+++ .+|..+..+ .+...+|.+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~ 159 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccc
Confidence 999987 456666655 3344455543
No 337
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.00 E-value=5.2e-10 Score=103.59 Aligned_cols=86 Identities=23% Similarity=0.341 Sum_probs=77.6
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeeccc-ccCcccccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQ-FSGTIDVLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~-L~~l~ 78 (579)
|++|++|+|++|.+++..|..|+.+++|+.|+|++|++++..|..+..+++|+.|+|++|. ++.. +.+..++ |+.|+
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~ 165 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLN 165 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEE
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEE
Confidence 5789999999999998888899999999999999999998889999999999999999998 5554 5666665 99999
Q ss_pred cccCcCCCC
Q 008055 79 IANNRFTGW 87 (579)
Q Consensus 79 l~~N~l~~~ 87 (579)
+++|.+++.
T Consensus 166 l~~n~i~~~ 174 (197)
T 4ezg_A 166 IQFDGVHDY 174 (197)
T ss_dssp CTTBCCCCC
T ss_pred CCCCCCcCh
Confidence 999999864
No 338
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.00 E-value=8.4e-10 Score=120.64 Aligned_cols=105 Identities=21% Similarity=0.250 Sum_probs=90.9
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
++|++|+|++|.+++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.+| .+..++ |+.|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 579999999999998888899999999999999999998889999999999999999999999865 477776 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.+++..|..+..+ .+...+|....
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 142 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHS 142 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccc
Confidence 9999998777766655 34455555543
No 339
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.98 E-value=6.8e-10 Score=110.76 Aligned_cols=106 Identities=20% Similarity=0.247 Sum_probs=76.9
Q ss_pred CCCCcEEeccCCcCCCC--chhhh--CCCCCCCEEeccCCcCCC--CCC-ccccCCCCCCeeEeecccccCccc--ccCC
Q 008055 1 MKTLKYLNIAHNQLQGQ--LNDMF--GQLPSLSTLDLSFNTLSG--NLP-QSFSSLSSLSSLYLQNNQFSGTID--VLAN 71 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~--~p~~~--~~l~~L~~L~l~~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~ 71 (579)
|++|++|+|++|++.+. +|..+ +.+++|+.|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.++ .+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 56889999999998765 34455 888999999999999983 223 334577899999999999998773 3444
Q ss_pred CC-CCeEEcccCcCCCCCccccc-cC-eeeccCCCCCCC
Q 008055 72 LP-LDNLNIANNRFTGWVPEQLK-NI-NLQKDGNSWSSG 107 (579)
Q Consensus 72 ~~-L~~l~l~~N~l~~~~p~~l~-~~-~~~~~~n~~~~~ 107 (579)
++ |+.|+|++|.|+ .+|..+. .+ .+...+|.+...
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred cCCCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 54 999999999998 7776654 33 344455655443
No 340
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.98 E-value=5.9e-10 Score=113.27 Aligned_cols=94 Identities=26% Similarity=0.288 Sum_probs=77.7
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|++++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 4789999999999976666899999999999999999987788899999999999999999987765 67675 999999
Q ss_pred ccCcCCCCCc-cccccC
Q 008055 80 ANNRFTGWVP-EQLKNI 95 (579)
Q Consensus 80 ~~N~l~~~~p-~~l~~~ 95 (579)
++|.+++..+ ..+..+
T Consensus 132 ~~n~l~~l~~~~~~~~l 148 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHL 148 (353)
T ss_dssp TTCCCSSSCSSCSCTTC
T ss_pred CCCCCcccCchhhhccC
Confidence 9999985433 244433
No 341
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.97 E-value=9.3e-10 Score=120.30 Aligned_cols=105 Identities=24% Similarity=0.213 Sum_probs=78.7
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
.++++|+|++|.|++..|..|+++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++ .+..++ |+.|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 357888888888887778888888888888888888887778888888888888888888887765 366665 888888
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
++|.+++..|..+..+ .+...+|.+..
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~ 143 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISS 143 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccc
Confidence 8888887555555444 33444454443
No 342
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.97 E-value=7e-10 Score=111.68 Aligned_cols=87 Identities=28% Similarity=0.260 Sum_probs=44.5
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEccc
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNIAN 81 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l~~ 81 (579)
+|++|+|++|.+++..+..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|+..++.+..++ |+.|++++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~ 273 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHT 273 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCS
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCC
Confidence 44555555555554444555555555555555555554444455555555555555555554333344443 55555555
Q ss_pred CcCCCCCc
Q 008055 82 NRFTGWVP 89 (579)
Q Consensus 82 N~l~~~~p 89 (579)
|+|++..+
T Consensus 274 N~l~~~~~ 281 (332)
T 2ft3_A 274 NNITKVGV 281 (332)
T ss_dssp SCCCBCCT
T ss_pred CCCCccCh
Confidence 55554333
No 343
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.97 E-value=6.9e-10 Score=119.76 Aligned_cols=94 Identities=23% Similarity=0.280 Sum_probs=80.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|++++..|..|+++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++. +..++ |+.|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 4789999999999988888899999999999999999988888899999999999999999998875 77775 999999
Q ss_pred ccCcCCC-CCccccccC
Q 008055 80 ANNRFTG-WVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~-~~p~~l~~~ 95 (579)
++|.+++ .+|..+..+
T Consensus 106 s~n~l~~~~~~~~~~~l 122 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNL 122 (549)
T ss_dssp TTCCCSSSCSSCSCTTC
T ss_pred CCCcccccchhhhhhcc
Confidence 9999986 355555444
No 344
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.97 E-value=1.2e-09 Score=109.84 Aligned_cols=93 Identities=25% Similarity=0.303 Sum_probs=74.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEccc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIAN 81 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~ 81 (579)
++|++|+|++|.+++..|..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+..++.+. ..|+.|++++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~-~~L~~L~l~~ 132 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP-SSLVELRIHD 132 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC-TTCCEEECCS
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc-ccCCEEECCC
Confidence 468888888888887777788888889999999988887778888888889999998888886655443 4588888888
Q ss_pred CcCCCCCccccccC
Q 008055 82 NRFTGWVPEQLKNI 95 (579)
Q Consensus 82 N~l~~~~p~~l~~~ 95 (579)
|.+++..+..+..+
T Consensus 133 n~i~~~~~~~~~~l 146 (332)
T 2ft3_A 133 NRIRKVPKGVFSGL 146 (332)
T ss_dssp SCCCCCCSGGGSSC
T ss_pred CccCccCHhHhCCC
Confidence 88886655555544
No 345
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.97 E-value=2.1e-09 Score=110.79 Aligned_cols=103 Identities=23% Similarity=0.277 Sum_probs=85.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
|++|++|+|++|.+++..|..|+++++|+.|+|++|+|+...+..|.++++|+.|+|++|+|++.++. +..++ |+.|+
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 57899999999999988888999999999999999999954444468999999999999999998764 77775 99999
Q ss_pred cccCcCCCCCccccccC-eeeccCCC
Q 008055 79 IANNRFTGWVPEQLKNI-NLQKDGNS 103 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~-~~~~~~n~ 103 (579)
+++|.+++.....+..+ .+...+|.
T Consensus 172 l~~n~l~~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 172 LSSNRLTHVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp CCSSCCSBCCGGGCTTCSEEECCSSC
T ss_pred CCCCcCCccccccccccceeeccccc
Confidence 99999997655555555 33334443
No 346
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.97 E-value=5.3e-10 Score=106.86 Aligned_cols=88 Identities=24% Similarity=0.371 Sum_probs=74.7
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCc-CCCCCCccccCCCCCCeeEeec-ccccCccc-ccCCCC-CCeE
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNT-LSGNLPQSFSSLSSLSSLYLQN-NQFSGTID-VLANLP-LDNL 77 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~~~~~-~~~~~~-L~~l 77 (579)
.+|++|+|++|+|++..+..|+++++|+.|+|++|+ +++..+..|.++++|+.|+|++ |+|++.++ .+..++ |+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468999999999997777789999999999999997 8866666899999999999998 99998775 366664 9999
Q ss_pred EcccCcCCCCCcc
Q 008055 78 NIANNRFTGWVPE 90 (579)
Q Consensus 78 ~l~~N~l~~~~p~ 90 (579)
++++|.+++ +|.
T Consensus 111 ~l~~n~l~~-lp~ 122 (239)
T 2xwt_C 111 GIFNTGLKM-FPD 122 (239)
T ss_dssp EEEEECCCS-CCC
T ss_pred eCCCCCCcc-ccc
Confidence 999999986 664
No 347
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.97 E-value=1.2e-09 Score=121.12 Aligned_cols=94 Identities=29% Similarity=0.374 Sum_probs=61.4
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|++|+|++|.|++..+..|+++++|+.|+|++|.+++..|..|+++++|+.|+|++|+|++.++. +..+. |+.|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 3566777777777766666677777777777777777766666666777777777777777666543 55554 677777
Q ss_pred ccCcCCCCCccccccC
Q 008055 80 ANNRFTGWVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~ 95 (579)
++|.+++..|..+..+
T Consensus 105 ~~n~l~~~~~~~~~~l 120 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQ 120 (680)
T ss_dssp CSSCCCCCCSCTTTTC
T ss_pred CCCccCccChhHcccc
Confidence 7776665555554443
No 348
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.96 E-value=3.7e-10 Score=127.15 Aligned_cols=104 Identities=18% Similarity=0.232 Sum_probs=86.8
Q ss_pred CCCCcEEeccCCcCCC-----------------CchhhhC--CCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeeccc
Q 008055 1 MKTLKYLNIAHNQLQG-----------------QLNDMFG--QLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQ 61 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 61 (579)
|++|++|+|++|+|+| .+|+.++ +|++|+.|+|++|++.|.+|..|++|++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 5789999999999998 3899988 99999999999999999999999999999999999998
Q ss_pred -ccC-cccc-cCC-------C-CCCeEEcccCcCCCCCcc--ccccC----eeeccCCCCC
Q 008055 62 -FSG-TIDV-LAN-------L-PLDNLNIANNRFTGWVPE--QLKNI----NLQKDGNSWS 105 (579)
Q Consensus 62 -l~~-~~~~-~~~-------~-~L~~l~l~~N~l~~~~p~--~l~~~----~~~~~~n~~~ 105 (579)
|+| .+|. +.. + .|+.|+|++|.|+ .+|. .+..+ .+...+|.+.
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~ 586 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR 586 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc
Confidence 998 4542 332 2 4999999999999 8887 66655 3444555544
No 349
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.96 E-value=4.5e-10 Score=111.93 Aligned_cols=84 Identities=18% Similarity=0.188 Sum_probs=45.1
Q ss_pred CCCcEEeccCCcCCCCch----hhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCc---ccc--cCCC
Q 008055 2 KTLKYLNIAHNQLQGQLN----DMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGT---IDV--LANL 72 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---~~~--~~~~ 72 (579)
++|++|+|++|.+++..+ ..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++.+. ++. +..+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 455666666666655333 2334556666666666666655555566666666666666665442 111 1233
Q ss_pred C-CCeEEcccCcCC
Q 008055 73 P-LDNLNIANNRFT 85 (579)
Q Consensus 73 ~-L~~l~l~~N~l~ 85 (579)
+ |+.|+|++|.++
T Consensus 197 ~~L~~L~Ls~N~l~ 210 (310)
T 4glp_A 197 PAIQNLALRNTGME 210 (310)
T ss_dssp CCCCSCBCCSSCCC
T ss_pred CCCCEEECCCCCCC
Confidence 3 555555555554
No 350
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=118.19 Aligned_cols=83 Identities=27% Similarity=0.319 Sum_probs=38.2
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEcc
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNIA 80 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l~ 80 (579)
+|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++.++ .+..++ |+.|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 34445555555544444444444555555555554444444444444444444444444444432 233332 4444444
Q ss_pred cCcCC
Q 008055 81 NNRFT 85 (579)
Q Consensus 81 ~N~l~ 85 (579)
+|.++
T Consensus 109 ~n~l~ 113 (570)
T 2z63_A 109 ETNLA 113 (570)
T ss_dssp TSCCC
T ss_pred ccccc
Confidence 44444
No 351
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.95 E-value=1e-09 Score=111.49 Aligned_cols=77 Identities=18% Similarity=0.253 Sum_probs=35.2
Q ss_pred EeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEcccCcC
Q 008055 7 LNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIANNRF 84 (579)
Q Consensus 7 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~~N~l 84 (579)
.++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+|++|.+
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 444444444 3443332 2455555555555433333445555555555555555444332 33333 55555555555
Q ss_pred CC
Q 008055 85 TG 86 (579)
Q Consensus 85 ~~ 86 (579)
++
T Consensus 113 ~~ 114 (353)
T 2z80_A 113 SN 114 (353)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 352
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.95 E-value=1.8e-09 Score=108.55 Aligned_cols=93 Identities=25% Similarity=0.343 Sum_probs=75.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEccc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIAN 81 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~ 81 (579)
++|+.|+|++|+|++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+..+..+. ..|+.|++++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~-~~L~~L~l~~ 130 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP-KTLQELRVHE 130 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC-TTCCEEECCS
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhc-ccccEEECCC
Confidence 468889999999987777788899999999999999998778889999999999999999886554433 3588899999
Q ss_pred CcCCCCCccccccC
Q 008055 82 NRFTGWVPEQLKNI 95 (579)
Q Consensus 82 N~l~~~~p~~l~~~ 95 (579)
|.+++..+..+..+
T Consensus 131 n~l~~~~~~~~~~l 144 (330)
T 1xku_A 131 NEITKVRKSVFNGL 144 (330)
T ss_dssp SCCCBBCHHHHTTC
T ss_pred CcccccCHhHhcCC
Confidence 98887766555444
No 353
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.95 E-value=1.4e-09 Score=114.00 Aligned_cols=94 Identities=26% Similarity=0.299 Sum_probs=80.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l 79 (579)
++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +..++ |+.|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 4689999999999988888999999999999999999987778899999999999999999988764 66665 999999
Q ss_pred ccCcCCCCCccccccC
Q 008055 80 ANNRFTGWVPEQLKNI 95 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~ 95 (579)
++|.|++..+..+..+
T Consensus 144 ~~N~i~~~~~~~~~~l 159 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRI 159 (440)
T ss_dssp CSCCCCEECTTTTTTC
T ss_pred CCCcccccCHHHhhhC
Confidence 9999986666555544
No 354
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.95 E-value=1.5e-09 Score=118.66 Aligned_cols=87 Identities=23% Similarity=0.258 Sum_probs=76.8
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
|++|++|+|++|++++..|..|+++++|+.|+|++|.+++..|..|+++++|+.|+|++|+|++..+ .+..++ |+.|+
T Consensus 56 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~ 135 (606)
T 3t6q_A 56 LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLY 135 (606)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEE
T ss_pred CccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEE
Confidence 5789999999999998889999999999999999999998889999999999999999999998754 366665 99999
Q ss_pred cccCcCCCC
Q 008055 79 IANNRFTGW 87 (579)
Q Consensus 79 l~~N~l~~~ 87 (579)
|++|.+++.
T Consensus 136 L~~n~l~~~ 144 (606)
T 3t6q_A 136 LGSNHISSI 144 (606)
T ss_dssp CCSSCCCCC
T ss_pred CCCCccccc
Confidence 999999874
No 355
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.94 E-value=7.6e-10 Score=105.80 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=78.5
Q ss_pred CCCCcEEeccCCc-CCCCchhhhCCCCCCCEEeccC-CcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CC--
Q 008055 1 MKTLKYLNIAHNQ-LQGQLNDMFGQLPSLSTLDLSF-NTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LD-- 75 (579)
Q Consensus 1 l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~-- 75 (579)
+++|++|+|++|. ++...+..|.++++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++.++ +..+. |+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIF 132 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSE
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccccc-cccccccccc
Confidence 5789999999997 8866667899999999999998 99997767789999999999999999998655 65664 77
Q ss_pred -eEEcccC-cCCCCCccccccC
Q 008055 76 -NLNIANN-RFTGWVPEQLKNI 95 (579)
Q Consensus 76 -~l~l~~N-~l~~~~p~~l~~~ 95 (579)
.|++++| .+++..+..+..+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGL 154 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTT
T ss_pred cEEECCCCcchhhcCcccccch
Confidence 9999999 8987666556544
No 356
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.94 E-value=1.2e-09 Score=117.03 Aligned_cols=105 Identities=24% Similarity=0.255 Sum_probs=76.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCC--CCCccccCCCCCCeeEeecccccCccc-c-cCCCC-CC
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSG--NLPQSFSSLSSLSSLYLQNNQFSGTID-V-LANLP-LD 75 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~~~-L~ 75 (579)
+++|++|+|++|.+++.+|..|+.+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.+| . +..++ |+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4678888888888888788888888888888888888886 556778888888888888888888443 2 45554 88
Q ss_pred eEEcccCcCCCCCccccc-cC-eeeccCCCCC
Q 008055 76 NLNIANNRFTGWVPEQLK-NI-NLQKDGNSWS 105 (579)
Q Consensus 76 ~l~l~~N~l~~~~p~~l~-~~-~~~~~~n~~~ 105 (579)
.|+|++|.+++.+|..+. .+ .+...+|.+.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 888888888777776552 33 3344444443
No 357
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.92 E-value=7.5e-10 Score=110.71 Aligned_cols=98 Identities=26% Similarity=0.249 Sum_probs=81.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEccc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIAN 81 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~ 81 (579)
++|++|+|++|.|++..|..|+.+++|+.|+|++|.+++..| +..+++|+.|+|++|+|++.++. ..|+.|++++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~---~~L~~L~l~~ 108 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG---PSIETLHAAN 108 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEEC---TTCCEEECCS
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCC---CCcCEEECCC
Confidence 579999999999999888999999999999999999997554 99999999999999999976532 3589999999
Q ss_pred CcCCCCCccccccC-eeeccCCCC
Q 008055 82 NRFTGWVPEQLKNI-NLQKDGNSW 104 (579)
Q Consensus 82 N~l~~~~p~~l~~~-~~~~~~n~~ 104 (579)
|.+++..+..+..+ .+...+|.+
T Consensus 109 n~l~~~~~~~~~~L~~L~l~~N~l 132 (317)
T 3o53_A 109 NNISRVSCSRGQGKKNIYLANNKI 132 (317)
T ss_dssp SCCSEEEECCCSSCEEEECCSSCC
T ss_pred CccCCcCccccCCCCEEECCCCCC
Confidence 99988777666666 334444443
No 358
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.92 E-value=1.2e-09 Score=124.22 Aligned_cols=91 Identities=24% Similarity=0.310 Sum_probs=46.3
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCcc--ccCCCCCCeeEeecccccCccc--ccCCCC-CCe
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQS--FSSLSSLSSLYLQNNQFSGTID--VLANLP-LDN 76 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-L~~ 76 (579)
++|++|+|++|.|++..|+.|+++++|+.|+|++|.|++.+|.. |.+|++|+.|+|++|.+++..+ .+..++ |+.
T Consensus 73 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~ 152 (844)
T 3j0a_A 73 PNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKS 152 (844)
T ss_dssp TTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCE
T ss_pred CCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCE
Confidence 44555555555555444555555555555555555555444433 5555555555555555554432 244443 555
Q ss_pred EEcccCcCCCCCcccc
Q 008055 77 LNIANNRFTGWVPEQL 92 (579)
Q Consensus 77 l~l~~N~l~~~~p~~l 92 (579)
|+|++|.+++..|..+
T Consensus 153 L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 153 IDFSSNQIFLVCEHEL 168 (844)
T ss_dssp EEEESSCCCCCCSGGG
T ss_pred EECCCCcCCeeCHHHc
Confidence 5555555555444433
No 359
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.91 E-value=1.3e-09 Score=117.48 Aligned_cols=95 Identities=29% Similarity=0.323 Sum_probs=78.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCc--ccccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGT--IDVLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-L~~l 77 (579)
|++|++|+|++|++++..|+.|+++++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++. ++.+..++ |+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 57899999999999988888999999999999999999987777799999999999999999864 34577775 9999
Q ss_pred EcccCcCCCCCc-cccccC
Q 008055 78 NIANNRFTGWVP-EQLKNI 95 (579)
Q Consensus 78 ~l~~N~l~~~~p-~~l~~~ 95 (579)
++++|.+.+.+| ..+..+
T Consensus 129 ~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp EEEESSSCCEECTTTTTTC
T ss_pred ECCCCccccccCHhhhhcc
Confidence 999998555555 455555
No 360
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.91 E-value=2.6e-09 Score=118.44 Aligned_cols=105 Identities=20% Similarity=0.266 Sum_probs=89.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
+++|++|+|++|.+++..|..|+++++|+.|+|++|+|++..+..|+++++|++|+|++|+|++.++ .+..++ |+.|+
T Consensus 48 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 48 YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 4789999999999999999999999999999999999996555679999999999999999999885 477775 99999
Q ss_pred cccCcCCCCCccccccC----eeeccCCCCC
Q 008055 79 IANNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 79 l~~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
|++|.+++..|..+..+ .+...+|...
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCccc
Confidence 99999999888766554 3444455443
No 361
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.89 E-value=2.3e-09 Score=116.05 Aligned_cols=105 Identities=25% Similarity=0.248 Sum_probs=79.8
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCC--CCCccccCCCCCCeeEeecccccCcc-cc-cCCCC-CC
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSG--NLPQSFSSLSSLSSLYLQNNQFSGTI-DV-LANLP-LD 75 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~-~~-~~~~~-L~ 75 (579)
+++|++|+|++|.+++.+|..|+++++|+.|+|++|+|++ .+|..+.++++|+.|+|++|+|++.+ +. +..++ |+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4678899999999988888888899999999999999886 23467888899999999999998844 33 55554 88
Q ss_pred eEEcccCcCCCCCcccc-ccC-eeeccCCCCC
Q 008055 76 NLNIANNRFTGWVPEQL-KNI-NLQKDGNSWS 105 (579)
Q Consensus 76 ~l~l~~N~l~~~~p~~l-~~~-~~~~~~n~~~ 105 (579)
.|+|++|.+++.+|..+ ..+ .+...+|.+.
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM 463 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc
Confidence 88888888888777666 344 3444445443
No 362
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.88 E-value=1.4e-09 Score=108.64 Aligned_cols=103 Identities=19% Similarity=0.180 Sum_probs=71.0
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCcccc-CCCCCCeeEeecccccCcccccCCCCCCeEEcc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFS-SLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIA 80 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~ 80 (579)
++|++|+|++|++++..+..|+.+++|+.|+|++|.|++..|..+. .+++|+.|+|++|+|++.++......|+.|+|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls 199 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS 199 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECC
Confidence 5677778888888776677777888888888888888876666664 678888888888888876443332248888888
Q ss_pred cCcCCCCCccccccC----eeeccCCCCC
Q 008055 81 NNRFTGWVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 81 ~N~l~~~~p~~l~~~----~~~~~~n~~~ 105 (579)
+|.|++..+. +..+ .+...+|.+.
T Consensus 200 ~N~l~~l~~~-~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 200 SNKLAFMGPE-FQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp SSCCCEECGG-GGGGTTCSEEECTTSCCC
T ss_pred CCcCCcchhh-hcccCcccEEECcCCccc
Confidence 8888854443 4333 3344445443
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.88 E-value=6.9e-09 Score=100.68 Aligned_cols=81 Identities=22% Similarity=0.327 Sum_probs=58.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEcc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIA 80 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~ 80 (579)
|++|++|+|++|.|+ .+| .+..+++|+.|+|++|+|++ +|+ +.++++|+.|+|++|+|++.++... ..|+.|+|+
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~~~~-~~L~~L~L~ 114 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNGIPS-ACLSRLFLD 114 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTTCCC-SSCCEEECC
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCcccc-CcccEEEcc
Confidence 357788888888887 455 57778888888888888885 343 7788888888888888877554333 447777777
Q ss_pred cCcCCC
Q 008055 81 NNRFTG 86 (579)
Q Consensus 81 ~N~l~~ 86 (579)
+|.|++
T Consensus 115 ~N~l~~ 120 (263)
T 1xeu_A 115 NNELRD 120 (263)
T ss_dssp SSCCSB
T ss_pred CCccCC
Confidence 777775
No 364
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=1.7e-09 Score=107.39 Aligned_cols=184 Identities=21% Similarity=0.212 Sum_probs=120.4
Q ss_pred cceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCC--ccceeeEEeeCC---eEEEEEE
Q 008055 276 ENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPN--IMELVGYCSEYG---QHLLVYE 349 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 349 (579)
.+.++.|....||+.. ..+++|+.... .....+..|...++.+. +.. +.+++......+ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 56888886432 34567888999988773 322 334444433332 3478999
Q ss_pred ecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 008055 350 FRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC------------------------------------ 393 (579)
Q Consensus 350 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------ 393 (579)
+++|.+|.+... ..++..++..++.+++..|..||+..
T Consensus 97 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 97 KIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred ccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999988765321 23567777888888888888888610
Q ss_pred -------------------CCCeEEcCCCCCCEEEcC--CCceEEecccccccCCCCCcccccCCC-----C--------
Q 008055 394 -------------------SLSVVHKNIKSANILLDN--ELNPQLSDCGLASNMPNADEALNNDAG-----S-------- 439 (579)
Q Consensus 394 -------------------~~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~-----~-------- 439 (579)
...++|+|++|.||++++ ...+.|+||+.+............... .
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 135799999999999998 456789999987543221111000000 0
Q ss_pred Cc--cC-ccccccCCCCccchHHhHHHHHHHHHhCCCCC
Q 008055 440 GY--GA-PEVAMSGQYNIKSDVYSFGVVMLELLTGRKPF 475 (579)
Q Consensus 440 ~y--~a-PE~~~~~~~~~~~DvwslGv~l~elltg~~p~ 475 (579)
.| .. |+... ......+.|+++.++|.+.+|..+|
T Consensus 251 ~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 11 22211 1122368999999999999998876
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.87 E-value=6.3e-09 Score=102.58 Aligned_cols=82 Identities=30% Similarity=0.404 Sum_probs=67.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|++++..+ +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++. +.+..++ |+.|++
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYL 141 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEEC
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEc
Confidence 5789999999999986544 8899999999999999985 44 488899999999999999885 4555554 899999
Q ss_pred ccCcCCCC
Q 008055 80 ANNRFTGW 87 (579)
Q Consensus 80 ~~N~l~~~ 87 (579)
++|.+++.
T Consensus 142 ~~n~l~~~ 149 (291)
T 1h6t_A 142 GNNKITDI 149 (291)
T ss_dssp CSSCCCCC
T ss_pred cCCcCCcc
Confidence 99998864
No 366
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.87 E-value=6e-09 Score=103.61 Aligned_cols=84 Identities=30% Similarity=0.490 Sum_probs=66.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|.+++ ++ .+..+++|+.|+|++|+|++ +|. +..+++|+.|+|++|+|++.++ +..++ |+.|+|
T Consensus 84 l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 84 LTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEc
Confidence 5688999999999885 34 68889999999999999885 443 8888899999999998888765 55554 888889
Q ss_pred ccCcCCCCCc
Q 008055 80 ANNRFTGWVP 89 (579)
Q Consensus 80 ~~N~l~~~~p 89 (579)
++|.+++..+
T Consensus 159 ~~n~l~~~~~ 168 (308)
T 1h6u_A 159 GNAQVSDLTP 168 (308)
T ss_dssp CSSCCCCCGG
T ss_pred cCCcCCCChh
Confidence 8888886443
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.87 E-value=2.8e-09 Score=106.01 Aligned_cols=100 Identities=26% Similarity=0.434 Sum_probs=75.4
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|++++ ++. +..+++|+.|+|++|.+++. +. +..+++|+.|+|++|+|++.++ +..++ |+.|+|
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEEC
Confidence 5789999999999986 443 89999999999999999854 43 8889999999999999988666 66665 999999
Q ss_pred ccCcCCCCCc-cccccC-eeeccCCCCC
Q 008055 80 ANNRFTGWVP-EQLKNI-NLQKDGNSWS 105 (579)
Q Consensus 80 ~~N~l~~~~p-~~l~~~-~~~~~~n~~~ 105 (579)
++|.+++..+ ..+..+ .+...+|.+.
T Consensus 181 ~~n~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 181 DDNKISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred CCCccCcChhhcCCCCCCEEEccCCccC
Confidence 9999986544 122223 3444555544
No 368
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.87 E-value=6.7e-09 Score=102.39 Aligned_cols=82 Identities=20% Similarity=0.348 Sum_probs=69.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|+.|++++|.++. ++ .+..+++|+.|+|++|+|++. +. +.++++|+.|+|++|+|++.. .+..++ |+.|+|
T Consensus 45 l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEEC
T ss_pred cCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCCCh-hhccCCCCCEEEC
Confidence 3578999999999984 44 488899999999999999964 44 999999999999999999854 466665 999999
Q ss_pred ccCcCCCC
Q 008055 80 ANNRFTGW 87 (579)
Q Consensus 80 ~~N~l~~~ 87 (579)
++|.+++.
T Consensus 120 ~~n~i~~~ 127 (291)
T 1h6t_A 120 EHNGISDI 127 (291)
T ss_dssp TTSCCCCC
T ss_pred CCCcCCCC
Confidence 99999864
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.85 E-value=5.8e-09 Score=113.20 Aligned_cols=84 Identities=33% Similarity=0.590 Sum_probs=49.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|+.|+|++|.|++ +| .|..|++|+.|+|++|.|++ + +.+..|++|+.|+|++|+|++. +.+..++ |+.|+|
T Consensus 86 l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSL 160 (605)
T ss_dssp CTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEEC
T ss_pred CCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEEC
Confidence 4566666666666664 33 46666666666666666664 2 3466666666666666666654 3444443 666666
Q ss_pred ccCcCCCCCc
Q 008055 80 ANNRFTGWVP 89 (579)
Q Consensus 80 ~~N~l~~~~p 89 (579)
++|.|++..|
T Consensus 161 s~N~l~~~~~ 170 (605)
T 1m9s_A 161 EDNQISDIVP 170 (605)
T ss_dssp CSSCCCCCGG
T ss_pred cCCcCCCchh
Confidence 6666665444
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.85 E-value=6.2e-09 Score=101.01 Aligned_cols=81 Identities=35% Similarity=0.484 Sum_probs=66.4
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|+|++..+ |..+++|+.|+|++|+|++ +|... . ++|+.|+|++|+|++. +.+..++ |+.|+|
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~L 135 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT-DSLIHLKNLEILSI 135 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS-GGGTTCTTCCEEEC
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCCC-hhhcCcccccEEEC
Confidence 5689999999999996544 8999999999999999985 55433 3 8999999999999985 4566665 999999
Q ss_pred ccCcCCCC
Q 008055 80 ANNRFTGW 87 (579)
Q Consensus 80 ~~N~l~~~ 87 (579)
++|+|++.
T Consensus 136 s~N~i~~~ 143 (263)
T 1xeu_A 136 RNNKLKSI 143 (263)
T ss_dssp TTSCCCBC
T ss_pred CCCcCCCC
Confidence 99999864
No 371
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.83 E-value=1.6e-10 Score=107.17 Aligned_cols=82 Identities=22% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCcEEeccCCcCCCCchh------hhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CC
Q 008055 3 TLKYLNIAHNQLQGQLND------MFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LD 75 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~ 75 (579)
+++.++|+.|.++|.+|. .|+.+++|+.|+|++|.|++ +| .+.++++|+.|+|++|+|+..++.+..++ |+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCC
Confidence 455556666666655554 56666666666666666664 55 66666666666666666665443333333 66
Q ss_pred eEEcccCcCCC
Q 008055 76 NLNIANNRFTG 86 (579)
Q Consensus 76 ~l~l~~N~l~~ 86 (579)
.|+|++|.|++
T Consensus 97 ~L~L~~N~l~~ 107 (198)
T 1ds9_A 97 ELWISYNQIAS 107 (198)
T ss_dssp EEEEEEEECCC
T ss_pred EEECcCCcCCc
Confidence 66666666654
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.80 E-value=1e-08 Score=111.23 Aligned_cols=100 Identities=29% Similarity=0.427 Sum_probs=79.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|+.|+|++|+|++ + +.+..|++|+.|+|++|.|++. ..|..|++|+.|+|++|+|++.++ +..++ |+.|+|
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~L 182 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYL 182 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEEC
Confidence 5789999999999996 4 3589999999999999999964 689999999999999999999887 66665 999999
Q ss_pred ccCcCCCCCccccccC----eeeccCCCCCCC
Q 008055 80 ANNRFTGWVPEQLKNI----NLQKDGNSWSSG 107 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~~----~~~~~~n~~~~~ 107 (579)
++|.|++. | .+..+ .+...+|.+...
T Consensus 183 s~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 183 SKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred cCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 99999864 4 23333 344455554443
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.79 E-value=9.6e-09 Score=110.38 Aligned_cols=77 Identities=30% Similarity=0.393 Sum_probs=49.2
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEcccC
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIANN 82 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N 82 (579)
+|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++.++ +. ..|+.|+|++|
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~-~~L~~L~Ls~N 190 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP-ESLEALDVSTN 190 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC-TTCCEEECCSS
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh-CCCCEEECcCC
Confidence 45666666666664 444 46667777777777774 554 45677777777777777444 43 34777777777
Q ss_pred cCCCCCcc
Q 008055 83 RFTGWVPE 90 (579)
Q Consensus 83 ~l~~~~p~ 90 (579)
.|+ .+|.
T Consensus 191 ~L~-~lp~ 197 (571)
T 3cvr_A 191 LLE-SLPA 197 (571)
T ss_dssp CCS-SCCC
T ss_pred CCC-chhh
Confidence 776 4554
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.76 E-value=1.1e-08 Score=107.97 Aligned_cols=82 Identities=28% Similarity=0.362 Sum_probs=61.2
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++.++ +..++ |+.|++
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l 338 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFF 338 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEEC
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeEC
Confidence 4678888888888886444 7788888888888888886433 7778888888888888887766 44443 788888
Q ss_pred ccCcCCCC
Q 008055 80 ANNRFTGW 87 (579)
Q Consensus 80 ~~N~l~~~ 87 (579)
++|.+++.
T Consensus 339 ~~n~l~~~ 346 (466)
T 1o6v_A 339 YNNKVSDV 346 (466)
T ss_dssp CSSCCCCC
T ss_pred CCCccCCc
Confidence 88877764
No 375
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.75 E-value=3.3e-09 Score=113.95 Aligned_cols=95 Identities=27% Similarity=0.342 Sum_probs=66.8
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCC------
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPL------ 74 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L------ 74 (579)
+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+..++ +.. .|
T Consensus 139 l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~-~L~~~~~~ 208 (571)
T 3cvr_A 139 PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV-RNHHSEET 208 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------C
T ss_pred CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH-hhhccccc
Confidence 4678888888888885 665 57788888888888886 776 65 788888888888886555 433 45
Q ss_pred -CeEEcccCcCCCCCccccccC----eeeccCCCCCC
Q 008055 75 -DNLNIANNRFTGWVPEQLKNI----NLQKDGNSWSS 106 (579)
Q Consensus 75 -~~l~l~~N~l~~~~p~~l~~~----~~~~~~n~~~~ 106 (579)
+.|+|++|.|+ .+|..+..+ .+...+|.+.+
T Consensus 209 L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 209 EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred ceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 88888888887 467655444 34445555543
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.74 E-value=2.1e-08 Score=101.36 Aligned_cols=88 Identities=27% Similarity=0.387 Sum_probs=51.7
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEcc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNIA 80 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l~ 80 (579)
++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ + +.+..+++|+.|+|++|+|++. +.+..++ |+.|+++
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~ 295 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLN 295 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECc
Confidence 456666666666664332 6666666666666666664 2 3466666666666666666654 3344443 6666666
Q ss_pred cCcCCCCCcccccc
Q 008055 81 NNRFTGWVPEQLKN 94 (579)
Q Consensus 81 ~N~l~~~~p~~l~~ 94 (579)
+|.+++..|..+..
T Consensus 296 ~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 296 NNQLGNEDMEVIGG 309 (347)
T ss_dssp SSCCCGGGHHHHHT
T ss_pred CCcCCCcChhHhhc
Confidence 66666655554443
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.74 E-value=1.9e-08 Score=101.67 Aligned_cols=85 Identities=29% Similarity=0.466 Sum_probs=75.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~ 78 (579)
+++|++|+|++|.+++. +.+..+++|+.|+|++|.+++ + +.+..+++|+.|+|++|++++.++. +..++ |+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 57899999999999964 469999999999999999996 4 4689999999999999999988754 66665 99999
Q ss_pred cccCcCCCCCc
Q 008055 79 IANNRFTGWVP 89 (579)
Q Consensus 79 l~~N~l~~~~p 89 (579)
|++|++++..|
T Consensus 318 L~~n~l~~~~~ 328 (347)
T 4fmz_A 318 LSQNHITDIRP 328 (347)
T ss_dssp CCSSSCCCCGG
T ss_pred ccCCccccccC
Confidence 99999998777
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.71 E-value=3.5e-08 Score=104.09 Aligned_cols=81 Identities=35% Similarity=0.492 Sum_probs=44.6
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEcc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNIA 80 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l~ 80 (579)
++|+.|+|++|++++ + +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++.++ +..++ |+.|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcC
Confidence 456666666666653 2 245556666666666666654333 5555666666666666555444 33333 5555555
Q ss_pred cCcCCCC
Q 008055 81 NNRFTGW 87 (579)
Q Consensus 81 ~N~l~~~ 87 (579)
+|.+++.
T Consensus 296 ~n~l~~~ 302 (466)
T 1o6v_A 296 ENQLEDI 302 (466)
T ss_dssp SSCCSCC
T ss_pred CCcccCc
Confidence 5555543
No 379
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.71 E-value=1.1e-09 Score=101.54 Aligned_cols=83 Identities=23% Similarity=0.400 Sum_probs=74.3
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
+++|++|+|++|.|++ +| .+..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++.+ .+..++ |+.|+|
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEEC
Confidence 5789999999999996 77 8999999999999999999 78988888999999999999999854 555565 999999
Q ss_pred ccCcCCCC
Q 008055 80 ANNRFTGW 87 (579)
Q Consensus 80 ~~N~l~~~ 87 (579)
++|.|++.
T Consensus 123 ~~N~i~~~ 130 (198)
T 1ds9_A 123 SNNKITNW 130 (198)
T ss_dssp SEEECCCH
T ss_pred CCCcCCch
Confidence 99999853
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.69 E-value=5.2e-08 Score=102.40 Aligned_cols=79 Identities=27% Similarity=0.257 Sum_probs=48.1
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
+++|++|+|++|...+.+ .++.+++|+.|+|++|+|++ +| +..+++|+.|+|++|+|++. .+..++ |+.|++
T Consensus 147 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~L 219 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDC 219 (457)
T ss_dssp CTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEEC
T ss_pred CCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEEC
Confidence 356666666666554455 25666666666666666664 44 56666666666666666664 233443 666666
Q ss_pred ccCcCCC
Q 008055 80 ANNRFTG 86 (579)
Q Consensus 80 ~~N~l~~ 86 (579)
++|+|++
T Consensus 220 s~N~l~~ 226 (457)
T 3bz5_A 220 SSNKLTE 226 (457)
T ss_dssp CSSCCSC
T ss_pred cCCcccc
Confidence 6666665
No 381
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.67 E-value=5.3e-08 Score=102.35 Aligned_cols=80 Identities=24% Similarity=0.331 Sum_probs=64.3
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCC-CCeEEc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLP-LDNLNI 79 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l 79 (579)
|++|++|+|++|.|++. | .|+.+++|+.|+|++|+|++ +| ++.+++|+.|+|++|+|++. + +..++ |+.|++
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L 113 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNC 113 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEEC
Confidence 46788899999988864 5 68888889999999998886 44 88888888888888888885 3 55564 888888
Q ss_pred ccCcCCCC
Q 008055 80 ANNRFTGW 87 (579)
Q Consensus 80 ~~N~l~~~ 87 (579)
++|.+++.
T Consensus 114 ~~N~l~~l 121 (457)
T 3bz5_A 114 DTNKLTKL 121 (457)
T ss_dssp CSSCCSCC
T ss_pred CCCcCCee
Confidence 88888863
No 382
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.66 E-value=2.6e-08 Score=100.94 Aligned_cols=89 Identities=20% Similarity=0.211 Sum_probs=67.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCc-cccCCCCCCe-eEeecccccCcccc-cCCCC-CCeE
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQ-SFSSLSSLSS-LYLQNNQFSGTIDV-LANLP-LDNL 77 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~-L~l~~N~l~~~~~~-~~~~~-L~~l 77 (579)
++|++|+|++|+|+...++.|.+|++|+.|+|++|++.+.+|. .|.+|++|.. +.+++|+|++.++. +..++ |+.|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 4688888888888855556788888888888888888766664 5677887764 56677888887654 66665 8888
Q ss_pred EcccCcCCCCCcc
Q 008055 78 NIANNRFTGWVPE 90 (579)
Q Consensus 78 ~l~~N~l~~~~p~ 90 (579)
++++|.|++..+.
T Consensus 110 ~l~~n~l~~~~~~ 122 (350)
T 4ay9_X 110 LISNTGIKHLPDV 122 (350)
T ss_dssp EEEEECCSSCCCC
T ss_pred cccccccccCCch
Confidence 8888888765553
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.65 E-value=8.3e-08 Score=100.73 Aligned_cols=78 Identities=31% Similarity=0.418 Sum_probs=47.3
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEcccC
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIANN 82 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N 82 (579)
+|++|+|++|++++ +|. ..++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.++.+ ..|+.|++++|
T Consensus 112 ~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~--~~L~~L~L~~n 183 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP--PSLEFIAAGNN 183 (454)
T ss_dssp TCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC--TTCCEEECCSS
T ss_pred CCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc--ccccEEECcCC
Confidence 44455555554442 221 11567777777777775 66 4777777777777777777644322 14777777777
Q ss_pred cCCCCCc
Q 008055 83 RFTGWVP 89 (579)
Q Consensus 83 ~l~~~~p 89 (579)
.+++ +|
T Consensus 184 ~l~~-l~ 189 (454)
T 1jl5_A 184 QLEE-LP 189 (454)
T ss_dssp CCSS-CC
T ss_pred cCCc-Cc
Confidence 7765 44
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.64 E-value=1.9e-08 Score=109.37 Aligned_cols=63 Identities=29% Similarity=0.336 Sum_probs=35.5
Q ss_pred CCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccccCCCCCCeEEcccCcCCCCCccccccC
Q 008055 26 PSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDVLANLPLDNLNIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 26 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~l~~~ 95 (579)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++.++ ....|+.|+|++|.|+ .+|..+..+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~--~~~~L~~L~Ls~N~L~-~lp~~l~~l 283 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM--LPSGLLSLSVYRNQLT-RLPESLIHL 283 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCC-SCCGGGGGS
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc--ccccCcEEeCCCCCCC-cCCHHHhhc
Confidence 556666666666663 44 344566666666666665443 1123666666666666 555554443
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.59 E-value=5.4e-09 Score=109.82 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=60.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCC-------------CeeEeecccccCcccc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSL-------------SSLYLQNNQFSGTIDV 68 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L-------------~~L~l~~N~l~~~~~~ 68 (579)
++|++|++++|.| |.+|+.|++|++|+.|+|++|.++|.+|..++++.+| +.|++++|.|++.+..
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 5789999999999 7999999999999999999999999999999998875 9999999999986542
Q ss_pred cCCCCCCeEEcccCcCCCCCccccccC-eeeccCCCCC
Q 008055 69 LANLPLDNLNIANNRFTGWVPEQLKNI-NLQKDGNSWS 105 (579)
Q Consensus 69 ~~~~~L~~l~l~~N~l~~~~p~~l~~~-~~~~~~n~~~ 105 (579)
. ..|+.|++++|.+++ +|..+..+ .+...+|.+.
T Consensus 90 ~--~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~ 124 (454)
T 1jl5_A 90 P--PHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLK 124 (454)
T ss_dssp C--TTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred c--CCCCEEEccCCcCCc-cccccCCCcEEECCCCccC
Confidence 1 248899999999987 67655555 3344444443
No 386
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.57 E-value=3.8e-07 Score=91.05 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=99.1
Q ss_pred CccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCC---C-CccceeeEEeeCCeEEEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHH---P-NIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~lv 347 (579)
.+...+.++.|....||+. +..+++|+... ......+..|...+..+.+ + .+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4555678999999999998 66788887632 2224567888888887765 2 23344444 567899
Q ss_pred EEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 008055 348 YEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCS--------------------------------- 394 (579)
Q Consensus 348 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~--------------------------------- 394 (579)
|||++|.++..... ..++..++..++.+++..|..||+...
T Consensus 106 me~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 106 MKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 99999988864321 235666777788888888888885421
Q ss_pred ---------------------------CCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 395 ---------------------------LSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 395 ---------------------------~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
..++|+|++|.|||++.+..+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999866679999998754
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.54 E-value=1.1e-08 Score=105.23 Aligned_cols=86 Identities=23% Similarity=0.376 Sum_probs=53.5
Q ss_pred CCCcEEeccCCcCC-CCch---hhhCCCCCCCEEeccCCcCC--C---CCCccccCCCCCCeeEeeccccc----Ccc-c
Q 008055 2 KTLKYLNIAHNQLQ-GQLN---DMFGQLPSLSTLDLSFNTLS--G---NLPQSFSSLSSLSSLYLQNNQFS----GTI-D 67 (579)
Q Consensus 2 ~~L~~L~l~~n~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p~~~~~l~~L~~L~l~~N~l~----~~~-~ 67 (579)
++|++|+|++|+|+ +.+| ..|..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+ .
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 56777777777776 3444 35566677777777777766 2 33446666777777777777764 223 2
Q ss_pred ccCCCC-CCeEEcccCcCCCC
Q 008055 68 VLANLP-LDNLNIANNRFTGW 87 (579)
Q Consensus 68 ~~~~~~-L~~l~l~~N~l~~~ 87 (579)
.+..++ |+.|+|++|.|++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHH
T ss_pred HHccCCCcCEEECCCCCCchh
Confidence 344443 77777777776654
No 388
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.54 E-value=1.2e-08 Score=104.85 Aligned_cols=106 Identities=23% Similarity=0.323 Sum_probs=84.0
Q ss_pred CCCCcEEeccCCcCC--C---CchhhhCCCCCCCEEeccCCcCC----CCCCccccCCCCCCeeEeecccccCc----c-
Q 008055 1 MKTLKYLNIAHNQLQ--G---QLNDMFGQLPSLSTLDLSFNTLS----GNLPQSFSSLSSLSSLYLQNNQFSGT----I- 66 (579)
Q Consensus 1 l~~L~~L~l~~n~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L~l~~N~l~~~----~- 66 (579)
+++|++|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++. +
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 468999999999998 3 45558899999999999999996 67899999999999999999999876 2
Q ss_pred ccc--CCC-CCCeEEcccCcCCC----CCcccc----ccC-eeeccCCCCCC
Q 008055 67 DVL--ANL-PLDNLNIANNRFTG----WVPEQL----KNI-NLQKDGNSWSS 106 (579)
Q Consensus 67 ~~~--~~~-~L~~l~l~~N~l~~----~~p~~l----~~~-~~~~~~n~~~~ 106 (579)
..+ ..+ .|+.|+|++|.|++ .+|..+ ..+ .+...+|.+.+
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 334 224 49999999999998 477655 333 44555665543
No 389
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=2.5e-08 Score=95.89 Aligned_cols=83 Identities=22% Similarity=0.311 Sum_probs=64.0
Q ss_pred EeccCCcC---CCCchhhhCCCCCCCEEeccCCcCCC--CCCccccCCCCCCeeEeecccccCcc--cccCCCCCCeEEc
Q 008055 7 LNIAHNQL---QGQLNDMFGQLPSLSTLDLSFNTLSG--NLPQSFSSLSSLSSLYLQNNQFSGTI--DVLANLPLDNLNI 79 (579)
Q Consensus 7 L~l~~n~l---~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~~L~~l~l 79 (579)
++++.|.+ .+.++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.. ..+..+.|+.|+|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L 227 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 227 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEEC
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEc
Confidence 45556632 22233333568999999999999998 55677889999999999999999863 3344457999999
Q ss_pred ccCcCCCCCc
Q 008055 80 ANNRFTGWVP 89 (579)
Q Consensus 80 ~~N~l~~~~p 89 (579)
++|++++.+|
T Consensus 228 ~~Npl~~~~~ 237 (267)
T 3rw6_A 228 DGNSLCDTFR 237 (267)
T ss_dssp TTSTTGGGCS
T ss_pred cCCcCccccC
Confidence 9999998776
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.49 E-value=3.4e-08 Score=100.51 Aligned_cols=88 Identities=24% Similarity=0.318 Sum_probs=58.9
Q ss_pred CCcEEeccCCcCCCCch----hhhCCCC-CCCEEeccCCcCCCCCCccccCC-----CCCCeeEeecccccCcccc----
Q 008055 3 TLKYLNIAHNQLQGQLN----DMFGQLP-SLSTLDLSFNTLSGNLPQSFSSL-----SSLSSLYLQNNQFSGTIDV---- 68 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~---- 68 (579)
+|++|+|++|.|++..+ ..|..++ +|+.|+|++|+|++..+..|..+ ++|+.|+|++|+|++..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47777777777776555 6666777 77777777777776666666664 7777777777777765532
Q ss_pred -cCCC--CCCeEEcccCcCCCCCcc
Q 008055 69 -LANL--PLDNLNIANNRFTGWVPE 90 (579)
Q Consensus 69 -~~~~--~L~~l~l~~N~l~~~~p~ 90 (579)
+... .|+.|+|++|.|++..+.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~ 127 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSS 127 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHH
T ss_pred HHHhCCCCccEEECcCCcCCcHHHH
Confidence 2222 377777777777665543
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.49 E-value=3.6e-07 Score=99.29 Aligned_cols=55 Identities=31% Similarity=0.370 Sum_probs=25.2
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCc
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGT 65 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 65 (579)
+|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|++.
T Consensus 62 ~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l 116 (622)
T 3g06_A 62 HITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHL 116 (622)
T ss_dssp TCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCC
T ss_pred CCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCC
Confidence 3444555555444 2332 3444555555555544 2333 334445555555544443
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.47 E-value=6.7e-08 Score=92.93 Aligned_cols=64 Identities=27% Similarity=0.477 Sum_probs=55.2
Q ss_pred CCCCcEEeccCCcCCC--CchhhhCCCCCCCEEeccCCcCCCCCCccccCCC--CCCeeEeecccccCcc
Q 008055 1 MKTLKYLNIAHNQLQG--QLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLS--SLSSLYLQNNQFSGTI 66 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~~~~ 66 (579)
|++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.|++.+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 5789999999999998 5567888999999999999999965 4455555 9999999999999854
No 393
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.47 E-value=2.4e-08 Score=100.39 Aligned_cols=84 Identities=21% Similarity=0.221 Sum_probs=57.5
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCC-CCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGN-LPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
++|+.|+|++|.+.+..+. +..+++|+.|+|++|.+++. +|..+..+++|+.|+|++|.+++..+ .+..++ |+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4677777777777766554 45677777777777777655 66677777777777777777765543 355554 77777
Q ss_pred cccC-cCCC
Q 008055 79 IANN-RFTG 86 (579)
Q Consensus 79 l~~N-~l~~ 86 (579)
|++| .+++
T Consensus 149 L~~~~~l~~ 157 (336)
T 2ast_B 149 LSGCSGFSE 157 (336)
T ss_dssp CTTCBSCCH
T ss_pred CCCCCCCCH
Confidence 7777 5654
No 394
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41 E-value=1.5e-06 Score=85.21 Aligned_cols=76 Identities=20% Similarity=0.251 Sum_probs=59.6
Q ss_pred ccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCC---CccceeeEEeeCCeEEEEEEec
Q 008055 275 VENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHP---NIMELVGYCSEYGQHLLVYEFR 351 (579)
Q Consensus 275 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 351 (579)
..+.|+.|.++.||++...+|+.+++|+..... ......|..|+..++.+.+. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 357799999999999998899999999975432 12235788999999999765 567777653 369999999
Q ss_pred CCCCh
Q 008055 352 KNGSL 356 (579)
Q Consensus 352 ~~gsL 356 (579)
+++++
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 99864
No 395
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.41 E-value=1.5e-06 Score=84.37 Aligned_cols=134 Identities=16% Similarity=0.134 Sum_probs=95.9
Q ss_pred eeccCCce-EEEEEEeC-CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEeeCCeEEEEEEecCCC
Q 008055 278 LLGEGTFG-RVYRAQFA-DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSEYGQHLLVYEFRKNG 354 (579)
Q Consensus 278 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 354 (579)
.+..|..+ .||+.... ++..+++|+-.. .....+..|...++.+. +--+.++++++.+.+..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556655 69998765 466788888643 23556778888887763 333667888999999999999999998
Q ss_pred ChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 008055 355 SLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVC----------------------------------------- 393 (579)
Q Consensus 355 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------------- 393 (579)
++.+.... .......++.+++..|..||...
T Consensus 106 ~~~~~~~~--------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEE--------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHH--------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccC--------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 87765431 11223456667777777777530
Q ss_pred --------------CCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 394 --------------SLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 394 --------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
...++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999987767799999864
No 396
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.36 E-value=6.8e-08 Score=97.04 Aligned_cols=91 Identities=21% Similarity=0.230 Sum_probs=68.6
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCC-cCCCC-CCccccCCCCCCeeEeecc-cccCc--ccccCCC--C
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFN-TLSGN-LPQSFSSLSSLSSLYLQNN-QFSGT--IDVLANL--P 73 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~~l~~L~~L~l~~N-~l~~~--~~~~~~~--~ 73 (579)
+++|++|+|++|.+++..|..|+.+++|+.|+|++| .+++. +|..+.++++|+.|+|++| .+++. +..+..+ .
T Consensus 117 ~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~ 196 (336)
T 2ast_B 117 CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET 196 (336)
T ss_dssp BCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT
T ss_pred CCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC
Confidence 468899999999988888888888999999999998 67753 6777888888999999888 88763 2334333 4
Q ss_pred CCeEEcccC--cCC-CCCccc
Q 008055 74 LDNLNIANN--RFT-GWVPEQ 91 (579)
Q Consensus 74 L~~l~l~~N--~l~-~~~p~~ 91 (579)
|+.|+|++| .++ +.+|..
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~ 217 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTL 217 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHH
T ss_pred CCEEEeCCCcccCCHHHHHHH
Confidence 888888888 454 344443
No 397
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.32 E-value=1.3e-07 Score=96.27 Aligned_cols=87 Identities=24% Similarity=0.272 Sum_probs=71.5
Q ss_pred CCcEEeccCCcCCCCchhhhCCC-----CCCCEEeccCCcCCCCCCccccC----C-CCCCeeEeecccccCcccc----
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQL-----PSLSTLDLSFNTLSGNLPQSFSS----L-SSLSSLYLQNNQFSGTIDV---- 68 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~~----l-~~L~~L~l~~N~l~~~~~~---- 68 (579)
+|++|+|++|.|++..+..|..+ ++|+.|+|++|.|++..+..+.. + ++|+.|+|++|+|++....
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 79999999999998888888775 99999999999999777765444 4 8999999999999887632
Q ss_pred -cCC-C-CCCeEEcccCcCCCCCc
Q 008055 69 -LAN-L-PLDNLNIANNRFTGWVP 89 (579)
Q Consensus 69 -~~~-~-~L~~l~l~~N~l~~~~p 89 (579)
+.. . .|+.|+|++|.|+...+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHhCCCceeEEEccCCcCCHHHH
Confidence 333 2 59999999999986443
No 398
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.31 E-value=8.3e-07 Score=89.74 Aligned_cols=88 Identities=17% Similarity=0.242 Sum_probs=71.9
Q ss_pred cEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc--cCCCC-CC-eEEcc
Q 008055 5 KYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV--LANLP-LD-NLNIA 80 (579)
Q Consensus 5 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~~-L~-~l~l~ 80 (579)
+.++.++|+|+ .+|..+ .++|+.|+|++|+|+...+..|.+|++|+.|+|++|++.+.++. +..+. +. .+.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57889999999 788766 46899999999999954456799999999999999999887753 66664 54 57888
Q ss_pred cCcCCCCCccccccC
Q 008055 81 NNRFTGWVPEQLKNI 95 (579)
Q Consensus 81 ~N~l~~~~p~~l~~~ 95 (579)
+|+|++..|..+..+
T Consensus 89 ~N~l~~l~~~~f~~l 103 (350)
T 4ay9_X 89 ANNLLYINPEAFQNL 103 (350)
T ss_dssp ETTCCEECTTSBCCC
T ss_pred CCcccccCchhhhhc
Confidence 999998778777655
No 399
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.29 E-value=5.4e-06 Score=82.02 Aligned_cols=136 Identities=17% Similarity=0.117 Sum_probs=93.7
Q ss_pred cceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCC---CccceeeEEe-eCCeEEEEEEec
Q 008055 276 ENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHP---NIMELVGYCS-EYGQHLLVYEFR 351 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 351 (579)
.+.++.|....||+. +..+++|+-.. ......+..|...++.+.+. .+.+.+.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 356888999999998 56788888522 23456788999999988652 2455666663 456678999999
Q ss_pred CCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 008055 352 KNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEV--------------------------------------- 392 (579)
Q Consensus 352 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------------- 392 (579)
+|..|.+..- ..++..+...++.++++.|..||+.
T Consensus 96 ~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 96 QGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9988765321 1234445555555666666655542
Q ss_pred ------------------CCCCeEEcCCCCCCEEEcC---CCce-EEeccccccc
Q 008055 393 ------------------CSLSVVHKNIKSANILLDN---ELNP-QLSDCGLASN 425 (579)
Q Consensus 393 ------------------~~~~iiH~Dlkp~Nill~~---~~~~-kl~Dfg~~~~ 425 (579)
....++|+|+++.|||++. ++.+ .|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 4554 8999997653
No 400
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.26 E-value=5.9e-06 Score=83.76 Aligned_cols=77 Identities=13% Similarity=0.106 Sum_probs=55.9
Q ss_pred ccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCC--ccceeeEEeeC-CeEEEEEE
Q 008055 273 FNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPN--IMELVGYCSEY-GQHLLVYE 349 (579)
Q Consensus 273 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e 349 (579)
....+.++.|....+|+... ++..+++|..... ..+..|...+..+.... +.+++.++... +..++|||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 33456789999999999875 5788899987432 24777888887775433 45667776654 67899999
Q ss_pred ecCCCChh
Q 008055 350 FRKNGSLH 357 (579)
Q Consensus 350 ~~~~gsL~ 357 (579)
|++|.++.
T Consensus 115 ~l~G~~l~ 122 (362)
T 3ovc_A 115 RAQGVTLQ 122 (362)
T ss_dssp CCCSEETT
T ss_pred ecCCCCcc
Confidence 99986554
No 401
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.13 E-value=1.8e-05 Score=80.02 Aligned_cols=83 Identities=8% Similarity=-0.028 Sum_probs=52.9
Q ss_pred ccee-ccCCceEEEEEEeC-------CCcEEEEEEeCCCCC-CchhHHHHHHHHHHHhhcC-C--CCccceeeEEeeC--
Q 008055 276 ENLL-GEGTFGRVYRAQFA-------DGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLH-H--PNIMELVGYCSEY-- 341 (579)
Q Consensus 276 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 341 (579)
.+.| +.|....+|+.... ++..+++|+...... .......+..|+..++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88989999998654 266788887654220 0000133456666666553 2 3466778777654
Q ss_pred -CeEEEEEEecCCCChhh
Q 008055 342 -GQHLLVYEFRKNGSLHD 358 (579)
Q Consensus 342 -~~~~lv~e~~~~gsL~~ 358 (579)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45789999999877653
No 402
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.12 E-value=2.5e-05 Score=78.30 Aligned_cols=144 Identities=16% Similarity=0.212 Sum_probs=78.5
Q ss_pred ceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhh--cCCCCcccee-e--EEeeCCeEEEEEEec
Q 008055 277 NLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ--LHHPNIMELV-G--YCSEYGQHLLVYEFR 351 (579)
Q Consensus 277 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~-~--~~~~~~~~~lv~e~~ 351 (579)
+.|+.|..+.||+....+| .+++|+.... ........+.++.+.. +..|.++... | +....+..+++|||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566677899999987655 4889998652 1212222233333332 2234444311 1 123467789999999
Q ss_pred CCCChh--------------hhhcccCC-C--C-------CCCCHHHH-------------------------------H
Q 008055 352 KNGSLH--------------DFLHLSDE-D--N-------KPLIWNSR-------------------------------V 376 (579)
Q Consensus 352 ~~gsL~--------------~~l~~~~~-~--~-------~~l~~~~~-------------------------------~ 376 (579)
+|..+. ..+|.... . . ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 01121111 0 0 00122110 1
Q ss_pred HHHHHHHHHHHHHHh----------cCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 377 KIALGTARALEYLHE----------VCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 377 ~i~~~ia~~L~~LH~----------~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
.+...+..++++|++ .....++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111224446667763 014689999999999999878889999999764
No 403
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.09 E-value=2.8e-07 Score=96.80 Aligned_cols=86 Identities=27% Similarity=0.288 Sum_probs=47.7
Q ss_pred CCCcEEeccCCcCCCC----chhhhCCCCCCCEEeccCCcCCCCCCccccC-----CCCCCeeEeecccccCcc-----c
Q 008055 2 KTLKYLNIAHNQLQGQ----LNDMFGQLPSLSTLDLSFNTLSGNLPQSFSS-----LSSLSSLYLQNNQFSGTI-----D 67 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~~~~-----~ 67 (579)
++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.|++.. .
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5677777777777643 5666666777777777777765432222222 245566666666555431 1
Q ss_pred ccCCC-CCCeEEcccCcCCCC
Q 008055 68 VLANL-PLDNLNIANNRFTGW 87 (579)
Q Consensus 68 ~~~~~-~L~~l~l~~N~l~~~ 87 (579)
.+..+ .|+.|+|++|.+++.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHH
T ss_pred HHhhCCCccEEEccCCccccc
Confidence 12222 255555555555443
No 404
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.05 E-value=4.9e-07 Score=94.98 Aligned_cols=105 Identities=18% Similarity=0.157 Sum_probs=76.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCC-----CCCCCEEeccCCcCCCC----CCccccCCCCCCeeEeecccccCccc-cc-
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQ-----LPSLSTLDLSFNTLSGN----LPQSFSSLSSLSSLYLQNNQFSGTID-VL- 69 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~-----l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~~-~~- 69 (579)
+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|..+..+++|+.|+|++|.|++... .+
T Consensus 283 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 283 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred CCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 478999999999997654444443 37999999999999865 56777888999999999999987542 22
Q ss_pred ---C--CCCCCeEEcccCcCCC----CCccccccC----eeeccCCCCC
Q 008055 70 ---A--NLPLDNLNIANNRFTG----WVPEQLKNI----NLQKDGNSWS 105 (579)
Q Consensus 70 ---~--~~~L~~l~l~~N~l~~----~~p~~l~~~----~~~~~~n~~~ 105 (579)
. ...|+.|+|++|.+++ .+|..+..+ .+...+|.+.
T Consensus 363 ~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 363 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 2 2359999999999986 667654333 3445555543
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.00 E-value=9.3e-07 Score=90.03 Aligned_cols=85 Identities=22% Similarity=0.207 Sum_probs=56.2
Q ss_pred CCCcEEeccCCcCCCCchhhh-----CCCCCCCEEeccCCcCCC----CCCccccCCCCCCeeEeecccccCcc-----c
Q 008055 2 KTLKYLNIAHNQLQGQLNDMF-----GQLPSLSTLDLSFNTLSG----NLPQSFSSLSSLSSLYLQNNQFSGTI-----D 67 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~~-----~ 67 (579)
++|+.|+|++|.|+..-...+ ...++|+.|+|++|.|+. .++..+..+++|+.|+|++|.|+..- .
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 367788888888865433333 345778888888888763 24445566778888888888876532 2
Q ss_pred ccCCC-CCCeEEcccCcCCC
Q 008055 68 VLANL-PLDNLNIANNRFTG 86 (579)
Q Consensus 68 ~~~~~-~L~~l~l~~N~l~~ 86 (579)
.+... .|+.|+|++|.|+.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCH
T ss_pred HHhcCCCcCeEECCCCCCCH
Confidence 23333 38888888888764
No 406
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.99 E-value=7.3e-06 Score=81.97 Aligned_cols=93 Identities=20% Similarity=0.159 Sum_probs=75.7
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCC-eeEeecccccCccc-ccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLS-SLYLQNNQFSGTID-VLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~~-~~~~~~-L~~l 77 (579)
+++|+.|+|++|+++.+.+..|.++.+|+.|+|++| ++..-+..|.+|.+|+ .|+|.+ +++...+ .|..+. |+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 468999999999999666778999999999999998 7766667899999999 999988 7776554 477775 9999
Q ss_pred EcccCcCCCCCccccccC
Q 008055 78 NIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 78 ~l~~N~l~~~~p~~l~~~ 95 (579)
++++|.++..-+..|.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNG 320 (329)
T ss_dssp EECSSCCCEECTTTTCTT
T ss_pred EeCCCccCccchhhhcCC
Confidence 999999985555555443
No 407
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.88 E-value=1.6e-06 Score=88.30 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=59.1
Q ss_pred CCCcEEeccCCcCCCCchhhh-CCCCCCCEEeccCCcCCCCCCccc-----cCCCCCCeeEeecccccCcc-----cccC
Q 008055 2 KTLKYLNIAHNQLQGQLNDMF-GQLPSLSTLDLSFNTLSGNLPQSF-----SSLSSLSSLYLQNNQFSGTI-----DVLA 70 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~g~~p~~~-----~~l~~L~~L~l~~N~l~~~~-----~~~~ 70 (579)
++|+.|+|++|.|+......+ ..+++|+.|+|++|+|+..-...+ ...++|+.|+|++|.|+..- ..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 478899999998875433333 346788999999998875433333 24578999999999887532 2233
Q ss_pred CC-CCCeEEcccCcCCC
Q 008055 71 NL-PLDNLNIANNRFTG 86 (579)
Q Consensus 71 ~~-~L~~l~l~~N~l~~ 86 (579)
.. .|+.|+|++|.|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp TCSSCCEEECTTSSCHH
T ss_pred cCCCcCEEeCCCCCCCc
Confidence 33 48999999998864
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.77 E-value=8.2e-06 Score=74.21 Aligned_cols=86 Identities=15% Similarity=0.168 Sum_probs=65.7
Q ss_pred CCCcEEeccCC-cCCC----CchhhhCCCCCCCEEeccCCcCCCC----CCccccCCCCCCeeEeecccccCcc-----c
Q 008055 2 KTLKYLNIAHN-QLQG----QLNDMFGQLPSLSTLDLSFNTLSGN----LPQSFSSLSSLSSLYLQNNQFSGTI-----D 67 (579)
Q Consensus 2 ~~L~~L~l~~n-~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-----~ 67 (579)
++|++|+|++| .|.. .+...+...++|+.|+|++|.|... +...+...+.|+.|+|++|.|+..- .
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57999999999 8864 2456677789999999999998732 3445666789999999999998632 3
Q ss_pred ccCCC-CCCeEEc--ccCcCCCC
Q 008055 68 VLANL-PLDNLNI--ANNRFTGW 87 (579)
Q Consensus 68 ~~~~~-~L~~l~l--~~N~l~~~ 87 (579)
.+... .|+.|+| ++|.|...
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHhCCCceEEEecCCCCCCCHH
Confidence 34433 4999999 88998743
No 409
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.75 E-value=0.00017 Score=70.47 Aligned_cols=78 Identities=19% Similarity=0.243 Sum_probs=54.6
Q ss_pred CccccceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCC---CCccceeeEEeeCCeEEEEE
Q 008055 272 SFNVENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHH---PNIMELVGYCSEYGQHLLVY 348 (579)
Q Consensus 272 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lv~ 348 (579)
.+.-.+.+|.|..+.||+.+..||+.|.+|+-..... .....|..|...|+.+.- -.+.+++++. ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 4555678999999999999999999999998754432 123456778887777632 1234444432 347899
Q ss_pred EecCCCC
Q 008055 349 EFRKNGS 355 (579)
Q Consensus 349 e~~~~gs 355 (579)
||++++.
T Consensus 90 e~l~~~~ 96 (288)
T 3f7w_A 90 EWVDERP 96 (288)
T ss_dssp ECCCCCC
T ss_pred EeecccC
Confidence 9998764
No 410
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.74 E-value=0.00017 Score=71.10 Aligned_cols=75 Identities=16% Similarity=0.168 Sum_probs=58.5
Q ss_pred cceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC---CCCccceeeEEeeCCeEEEEEEecC
Q 008055 276 ENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH---HPNIMELVGYCSEYGQHLLVYEFRK 352 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~ 352 (579)
.+.|+.|....+|+... ++..+++|+.... ....+..|...|+.+. ...+.+++.++...+..++||||++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 46789999999999976 4677888887532 2566778888877763 3567788888888889999999999
Q ss_pred CCCh
Q 008055 353 NGSL 356 (579)
Q Consensus 353 ~gsL 356 (579)
+..+
T Consensus 115 G~~~ 118 (312)
T 3jr1_A 115 KSKN 118 (312)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8754
No 411
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.72 E-value=0.00021 Score=73.32 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=48.0
Q ss_pred cceeccCCceEEEEEEeC-CCcEEEEEEeCCCCC--C---chhHHHHHHHHHHHhhcCC--CCcc-ceeeEEeeCCeEEE
Q 008055 276 ENLLGEGTFGRVYRAQFA-DGKVLAVKKIDSSAL--P---SEMCDDFIEMVSNISQLHH--PNIM-ELVGYCSEYGQHLL 346 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~niv-~l~~~~~~~~~~~l 346 (579)
.+.||.|.++.||++... +++.+++|....... . ......+..|.+.++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 467899998653221 0 0123455667777776632 3333 45543 3455689
Q ss_pred EEEecCCC
Q 008055 347 VYEFRKNG 354 (579)
Q Consensus 347 v~e~~~~g 354 (579)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 412
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.68 E-value=8.6e-06 Score=88.35 Aligned_cols=87 Identities=11% Similarity=0.125 Sum_probs=52.3
Q ss_pred CCCCcEEecc----CCcCCCC-----chhhhCCCCCCCEEeccCC--cCCCCCCccccC-CCCCCeeEeecccccCc-cc
Q 008055 1 MKTLKYLNIA----HNQLQGQ-----LNDMFGQLPSLSTLDLSFN--TLSGNLPQSFSS-LSSLSSLYLQNNQFSGT-ID 67 (579)
Q Consensus 1 l~~L~~L~l~----~n~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~g~~p~~~~~-l~~L~~L~l~~N~l~~~-~~ 67 (579)
+++|+.|+|+ .|.+++. ++..+.++++|+.|+|+++ .+++..+..++. +++|+.|+|++|++++. ++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 4567777775 6677653 4444666777777777632 355544444443 66777777777776652 22
Q ss_pred -ccCCCC-CCeEEcccCcCCCC
Q 008055 68 -VLANLP-LDNLNIANNRFTGW 87 (579)
Q Consensus 68 -~~~~~~-L~~l~l~~N~l~~~ 87 (579)
.+..++ |+.|+|++|.|++.
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHhcCcccCeeeccCCCCcHH
Confidence 234443 77777777776543
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.68 E-value=6.6e-06 Score=74.83 Aligned_cols=84 Identities=20% Similarity=0.282 Sum_probs=66.3
Q ss_pred CCCcEEeccCCcCCCC----chhhhCCCCCCCEEeccCCcCCCC----CCccccCCCCCCeeEe--ecccccCcc-----
Q 008055 2 KTLKYLNIAHNQLQGQ----LNDMFGQLPSLSTLDLSFNTLSGN----LPQSFSSLSSLSSLYL--QNNQFSGTI----- 66 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l--~~N~l~~~~----- 66 (579)
++|++|+|++|.|... +...+...+.|+.|+|++|.|+.. +...+...+.|+.|+| ++|.|+..-
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 5799999999999742 455566678999999999999843 4567788899999999 889998642
Q ss_pred cccCCC-CCCeEEcccCcCC
Q 008055 67 DVLANL-PLDNLNIANNRFT 85 (579)
Q Consensus 67 ~~~~~~-~L~~l~l~~N~l~ 85 (579)
..+... .|+.|+|++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 223222 4999999999885
No 414
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.57 E-value=0.00034 Score=72.33 Aligned_cols=77 Identities=9% Similarity=0.048 Sum_probs=46.8
Q ss_pred CCCeEEcCCCCCCEEEcCCCceEEecccccccCCCCCcccccCC--CCCccCccccccC---CCCccchHHhHHHHHHHH
Q 008055 394 SLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GSGYGAPEVAMSG---QYNIKSDVYSFGVVMLEL 468 (579)
Q Consensus 394 ~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--~~~y~aPE~~~~~---~~~~~~DvwslGv~l~el 468 (579)
...++|+|+++.|||++.++ ++|+||+.+..-........... ...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 45899999999999999876 99999998754322111100000 1235555544311 112234556778888887
Q ss_pred HhC
Q 008055 469 LTG 471 (579)
Q Consensus 469 ltg 471 (579)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 415
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.51 E-value=2.1e-05 Score=85.29 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=58.0
Q ss_pred CCcEEeccCCc-CCC-CchhhhCCCCCCCEEeccCCcCCCC----CCccccCCCCCCeeEeecccccCcc----c-ccCC
Q 008055 3 TLKYLNIAHNQ-LQG-QLNDMFGQLPSLSTLDLSFNTLSGN----LPQSFSSLSSLSSLYLQNNQFSGTI----D-VLAN 71 (579)
Q Consensus 3 ~L~~L~l~~n~-l~~-~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~----~-~~~~ 71 (579)
+|++|+|++|. ++. .++....++++|+.|+|++|.+++. ++..+.++++|+.|+|++|.+++.. + .+..
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888876 211 1233344678888888888887765 4445566788888888888887322 2 2333
Q ss_pred CC-CCeEEcccCcCCCCCcccc
Q 008055 72 LP-LDNLNIANNRFTGWVPEQL 92 (579)
Q Consensus 72 ~~-L~~l~l~~N~l~~~~p~~l 92 (579)
++ |+.|+|++|.+.+ +|..+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHH
T ss_pred CCCCcEEeccCccHHH-HHHHH
Confidence 44 8888888888775 44433
No 416
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.46 E-value=2.2e-05 Score=85.02 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=56.2
Q ss_pred CCCCcEEecc--C----CcCCC-----CchhhhCCCCCCCEEeccCCcCCCCCCccccC-CCCCCeeEeecccccCcc-c
Q 008055 1 MKTLKYLNIA--H----NQLQG-----QLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSS-LSSLSSLYLQNNQFSGTI-D 67 (579)
Q Consensus 1 l~~L~~L~l~--~----n~l~~-----~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-l~~L~~L~l~~N~l~~~~-~ 67 (579)
+++|+.|+|+ + |.+++ .++..+..+++|+.|+|++ ++++..+..+.. +++|+.|+|++|.+++.. .
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred CCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 4678888888 4 55652 1223366678888888866 666555555555 778888888888876543 2
Q ss_pred cc-CCCC-CCeEEcccCcCCCC
Q 008055 68 VL-ANLP-LDNLNIANNRFTGW 87 (579)
Q Consensus 68 ~~-~~~~-L~~l~l~~N~l~~~ 87 (579)
.+ ..++ |+.|+|++|.+++.
T Consensus 475 ~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 475 HVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHhcCCCcCEEECcCCCCcHH
Confidence 22 3343 88888888887543
No 417
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.36 E-value=0.0059 Score=60.26 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=83.7
Q ss_pred cCHHHHHHHhCCccc-----cceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhc-----CCCC
Q 008055 261 YSIADLQMATGSFNV-----ENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQL-----HHPN 330 (579)
Q Consensus 261 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~n 330 (579)
++.+++.....+|.+ .+.|+.|....+|+....+| .+++|+..... .. ..+..|...+..+ .-|.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-~~---~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-EK---NDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----C---CHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-CH---HHHHHHHHHHHHHHHCCCCCCc
Confidence 444555555555654 23466788899999987666 57889886531 11 2233444444433 2233
Q ss_pred cccee-e--EEeeCCeEEEEEEecCCCChhh--------------hhcccCCC-C-C-----C-CCHHHHHH--------
Q 008055 331 IMELV-G--YCSEYGQHLLVYEFRKNGSLHD--------------FLHLSDED-N-K-----P-LIWNSRVK-------- 377 (579)
Q Consensus 331 iv~l~-~--~~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~-~-~-----~-l~~~~~~~-------- 377 (579)
++... | +....+..+++|+|++|..+.. .+|..... . . . ..|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 33211 1 1123467789999998865321 01211000 0 0 0 11221100
Q ss_pred ----HHHHHHHHHHHHHhc----CCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 378 ----IALGTARALEYLHEV----CSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 378 ----i~~~ia~~L~~LH~~----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
+...+...++++++. ...+++|+|+.+.|||++++..+.|+||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455666532 13478999999999999987656899999764
No 418
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.20 E-value=0.0051 Score=60.88 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=78.5
Q ss_pred ceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCC--CccceeeE-----EeeCCeEEEEEE
Q 008055 277 NLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHP--NIMELVGY-----CSEYGQHLLVYE 349 (579)
Q Consensus 277 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e 349 (579)
..++ |....||+....+|+.+++|........ ...+..|...+..+... .+.+++.. ....+..+++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 8888999988777878999998644322 33445566665554211 13333332 223566789999
Q ss_pred ecCCCChh-----h------h---hcccCC-----CCCCCCHHHH----HHH---------------HHHHHHHHHHHHh
Q 008055 350 FRKNGSLH-----D------F---LHLSDE-----DNKPLIWNSR----VKI---------------ALGTARALEYLHE 391 (579)
Q Consensus 350 ~~~~gsL~-----~------~---l~~~~~-----~~~~l~~~~~----~~i---------------~~~ia~~L~~LH~ 391 (579)
+++|..+. . . +|.... ....+.+... ..+ ...+...++.+.+
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99875432 0 0 111100 0111222111 000 1111122333322
Q ss_pred c----CCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 392 V----CSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 392 ~----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
. ....++|+|+++.|||++ + .+.|+||+.+.
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1 134688999999999999 4 88999998764
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.18 E-value=0.00046 Score=58.44 Aligned_cols=56 Identities=21% Similarity=0.272 Sum_probs=30.7
Q ss_pred EEeccCCcCC-CCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeeccccc
Q 008055 6 YLNIAHNQLQ-GQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFS 63 (579)
Q Consensus 6 ~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 63 (579)
.++.++++|+ ..+|..+ .++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666664 2344322 235666666666666444444555666666666666543
No 420
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=0.00037 Score=69.39 Aligned_cols=77 Identities=18% Similarity=0.188 Sum_probs=66.0
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCC-EEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLS-TLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNL 77 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l 77 (579)
|.+|+.|+|++| ++.+-+.+|.++.+|+ .|+|++ +++..-+..|.+|++|+.|+|++|+++...+ .|..+. |+.|
T Consensus 249 ~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 249 KKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 578999999998 8866778999999999 999999 7886667899999999999999999998775 466664 8877
Q ss_pred Ec
Q 008055 78 NI 79 (579)
Q Consensus 78 ~l 79 (579)
+.
T Consensus 327 y~ 328 (329)
T 3sb4_A 327 YK 328 (329)
T ss_dssp EC
T ss_pred cc
Confidence 63
No 421
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.13 E-value=0.0041 Score=60.87 Aligned_cols=71 Identities=10% Similarity=0.007 Sum_probs=40.8
Q ss_pred cceeccCCceEEEEEEeCCCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCc-cceeeEEeeCCeEEEEEEec-CC
Q 008055 276 ENLLGEGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNI-MELVGYCSEYGQHLLVYEFR-KN 353 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~ 353 (579)
.+.|+.|....+|+. ..+++|+........ .....|...++.+....+ .++++++ .+.-++++||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence 577889999999998 557888876432111 111245555544422222 3555443 33457899999 55
Q ss_pred CCh
Q 008055 354 GSL 356 (579)
Q Consensus 354 gsL 356 (579)
.+|
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 444
No 422
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.11 E-value=0.0026 Score=63.23 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=27.2
Q ss_pred CCCeEEcCCCCCCEEEcCC----CceEEeccccccc
Q 008055 394 SLSVVHKNIKSANILLDNE----LNPQLSDCGLASN 425 (579)
Q Consensus 394 ~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg~~~~ 425 (579)
...++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4579999999999999874 6789999998754
No 423
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.08 E-value=0.00011 Score=79.58 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=35.6
Q ss_pred CCCCCCCEEeccCCcCCCCCCcccc-CCCCCCeeEeecc-cccCc-ccc-cCCCC-CCeEEcccCcCCCCCc
Q 008055 23 GQLPSLSTLDLSFNTLSGNLPQSFS-SLSSLSSLYLQNN-QFSGT-IDV-LANLP-LDNLNIANNRFTGWVP 89 (579)
Q Consensus 23 ~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N-~l~~~-~~~-~~~~~-L~~l~l~~N~l~~~~p 89 (579)
..+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++. +..++ |+.|+|++|.+++..+
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~ 173 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSG 173 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCG
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcch
Confidence 3456666666666666655555554 4566666666666 34331 122 22333 6666666666554433
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.00 E-value=0.00013 Score=73.57 Aligned_cols=87 Identities=20% Similarity=0.240 Sum_probs=58.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhC--CCCCCCEEeccC--CcCCCC-----CCccc--cCCCCCCeeEeecccccCccc-c
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFG--QLPSLSTLDLSF--NTLSGN-----LPQSF--SSLSSLSSLYLQNNQFSGTID-V 68 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~l~~~~~-~ 68 (579)
+++|+.|+|..+.++...-..++ .+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.++.... .
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 46899999999988754444454 789999999863 332221 11122 247899999999999875431 1
Q ss_pred c---CCC-CCCeEEcccCcCCCC
Q 008055 69 L---ANL-PLDNLNIANNRFTGW 87 (579)
Q Consensus 69 ~---~~~-~L~~l~l~~N~l~~~ 87 (579)
+ ..+ .|+.|+|++|.|++.
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHH
T ss_pred HHhCccCCCCCEEECCCCCCChH
Confidence 1 223 499999999998763
No 425
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.98 E-value=0.0029 Score=57.76 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=64.1
Q ss_pred ChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccccCCCCCcccc
Q 008055 355 SLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALN 434 (579)
Q Consensus 355 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 434 (579)
+|.+.|. ..+.+++++++|.++.|.+.+|.-+-.... . ..+=+.|..|++..+|.|...+ ..+.
T Consensus 34 SL~eIL~---~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 34 SLEEILR---LYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHH---HcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 7888887 346789999999999999998877621100 1 1223456899999999987764 1110
Q ss_pred cCCCCCccCccccccCCCCccchHHhHHHHHHHHHh
Q 008055 435 NDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLT 470 (579)
Q Consensus 435 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~ellt 470 (579)
.....+.|||... ...+.+.=|||||+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1233577888763 345678899999999999885
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.93 E-value=0.00028 Score=62.83 Aligned_cols=81 Identities=11% Similarity=0.109 Sum_probs=50.8
Q ss_pred CCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCc-CCCCCCccccCC----CCCCeeEeecc-cccCcc-cccCCCC-C
Q 008055 3 TLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNT-LSGNLPQSFSSL----SSLSSLYLQNN-QFSGTI-DVLANLP-L 74 (579)
Q Consensus 3 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~L~l~~N-~l~~~~-~~~~~~~-L 74 (579)
+|++|||+++.++..--..+.++++|+.|+|+++. |+..--..++.+ ++|+.|+|+++ +||..- ..+..++ |
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46788888887765444556778888888888874 553222334443 36888888876 466421 2344444 7
Q ss_pred CeEEcccCc
Q 008055 75 DNLNIANNR 83 (579)
Q Consensus 75 ~~l~l~~N~ 83 (579)
+.|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888887764
No 427
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.90 E-value=0.0032 Score=65.08 Aligned_cols=73 Identities=10% Similarity=0.106 Sum_probs=48.2
Q ss_pred cceeccCCceEEEEEEeCC--------CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCc-cceeeEEeeCCeEEE
Q 008055 276 ENLLGEGTFGRVYRAQFAD--------GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNI-MELVGYCSEYGQHLL 346 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~l 346 (579)
.+.|+.|....||++...+ +..+++|+..... ....+..|..+++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----TESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568888899999998753 4788899884321 12445578777777643333 566666543 38
Q ss_pred EEEecCCCCh
Q 008055 347 VYEFRKNGSL 356 (579)
Q Consensus 347 v~e~~~~gsL 356 (579)
||||++|-+|
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986433
No 428
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.84 E-value=0.0021 Score=65.81 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=61.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCC-----CCCCccccCCCCCCeeEeecccccCccc-ccCCCC-C
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLS-----GNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-L 74 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L 74 (579)
.+|+.|.|. |+++..-+..|.++++|+.|+|.+|.+. ..-+..|.+|++|+.|+|. |.++.... .|..+. |
T Consensus 248 ~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSC
T ss_pred CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCc
Confidence 367888884 4566555778888888999888888765 3445678888888888888 44665443 355554 8
Q ss_pred CeEEcccCcCCCCCccccccC
Q 008055 75 DNLNIANNRFTGWVPEQLKNI 95 (579)
Q Consensus 75 ~~l~l~~N~l~~~~p~~l~~~ 95 (579)
+.|.|.+| ++..-+..|.++
T Consensus 326 ~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp CEEEECTT-CCEECTTSSSSS
T ss_pred cEEEECcc-ccEEcHHhCCCC
Confidence 88888555 543333444443
No 429
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.80 E-value=0.0059 Score=61.73 Aligned_cols=141 Identities=15% Similarity=0.154 Sum_probs=80.4
Q ss_pred ceeccCCceEEEEEEeC--------CCcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEeeCCeEEEE
Q 008055 277 NLLGEGTFGRVYRAQFA--------DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSEYGQHLLV 347 (579)
Q Consensus 277 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 347 (579)
+.|..|-...+|++... +++.+++|+..... .....+.+|..+++.+. +.-..++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 45777888899999764 24788898863321 12455567888877663 2223566666553 299
Q ss_pred EEecCCCChhhh-----------------hcccCC-CCCCC--CHHHHHHHHHHHHH-------------------HHHH
Q 008055 348 YEFRKNGSLHDF-----------------LHLSDE-DNKPL--IWNSRVKIALGTAR-------------------ALEY 388 (579)
Q Consensus 348 ~e~~~~gsL~~~-----------------l~~~~~-~~~~l--~~~~~~~i~~~ia~-------------------~L~~ 388 (579)
|||++|.+|..- +|.... ..... .+.+..++..++.. .+..
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999987554210 121111 11112 23444545443321 2333
Q ss_pred HHh----c-CCCCeEEcCCCCCCEEEcCC----CceEEecccccc
Q 008055 389 LHE----V-CSLSVVHKNIKSANILLDNE----LNPQLSDCGLAS 424 (579)
Q Consensus 389 LH~----~-~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg~~~ 424 (579)
|.+ . ....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 322 1 13468999999999999876 789999999874
No 430
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.71 E-value=0.0093 Score=59.46 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=27.2
Q ss_pred CCeEEcCCCCCCEEEcCCCceEEeccccccc
Q 008055 395 LSVVHKNIKSANILLDNELNPQLSDCGLASN 425 (579)
Q Consensus 395 ~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 425 (579)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999987653
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.68 E-value=0.002 Score=54.45 Aligned_cols=56 Identities=23% Similarity=0.376 Sum_probs=46.0
Q ss_pred CEEeccCCcCC-CCCCccccCCCCCCeeEeecccccCcccc-cCCCC-CCeEEcccCcCCC
Q 008055 29 STLDLSFNTLS-GNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANLP-LDNLNIANNRFTG 86 (579)
Q Consensus 29 ~~L~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-L~~l~l~~N~l~~ 86 (579)
..++.++++|+ ..+|..|. .+|+.|+|++|+|+.+++. +..++ |+.|+|++|.|..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 48999999997 45776543 4799999999999998864 66665 9999999999964
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.63 E-value=0.00023 Score=71.78 Aligned_cols=87 Identities=15% Similarity=0.212 Sum_probs=60.5
Q ss_pred CCCCcEEeccC--CcCCCC-----chhhh--CCCCCCCEEeccCCcCCCCCCcccc---CCCCCCeeEeecccccCcc--
Q 008055 1 MKTLKYLNIAH--NQLQGQ-----LNDMF--GQLPSLSTLDLSFNTLSGNLPQSFS---SLSSLSSLYLQNNQFSGTI-- 66 (579)
Q Consensus 1 l~~L~~L~l~~--n~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~~~~-- 66 (579)
|++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+++..+..+. .+++|+.|+|+.|.|++.-
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~ 297 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR 297 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH
Confidence 58999999863 222111 11223 3589999999999998754443443 5789999999999998742
Q ss_pred ---cccCCCC-CCeEEcccCcCCCC
Q 008055 67 ---DVLANLP-LDNLNIANNRFTGW 87 (579)
Q Consensus 67 ---~~~~~~~-L~~l~l~~N~l~~~ 87 (579)
..+..++ |+.|+|++|.|+..
T Consensus 298 ~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 298 LLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHhhcccCCcceEEECCCCcCCHH
Confidence 2223344 99999999998743
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.49 E-value=0.011 Score=59.68 Aligned_cols=74 Identities=7% Similarity=0.035 Sum_probs=40.8
Q ss_pred cceeccCCceEEEEEEeCC---------CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCC-ccceeeEEeeCCeEE
Q 008055 276 ENLLGEGTFGRVYRAQFAD---------GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPN-IMELVGYCSEYGQHL 345 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~ 345 (579)
.+.|+.|....+|+....+ +..+++|+..... ........|...++.+.... ..++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3467788889999997654 2678888865421 11111245666665553223 33566544 2 36
Q ss_pred EEEEecCCCCh
Q 008055 346 LVYEFRKNGSL 356 (579)
Q Consensus 346 lv~e~~~~gsL 356 (579)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 434
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.41 E-value=0.025 Score=58.73 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=45.4
Q ss_pred cceeccCCceEEEEEEeCC-CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcCCCCc-cceeeEEeeCCeEEEEEEecCC
Q 008055 276 ENLLGEGTFGRVYRAQFAD-GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNI-MELVGYCSEYGQHLLVYEFRKN 353 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 353 (579)
.+.|+.|-...+|++...+ +..+++|+..... .... ....|..+++.+...++ .++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4568888899999998765 4778888875422 1111 11467777777754444 46676663 2 359999987
Q ss_pred CCh
Q 008055 354 GSL 356 (579)
Q Consensus 354 gsL 356 (579)
-+|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 443
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.18 E-value=0.0024 Score=57.85 Aligned_cols=82 Identities=17% Similarity=0.208 Sum_probs=56.2
Q ss_pred CCCcEEeccCC-cCCC----CchhhhCCCCCCCEEeccCCcCCC----CCCccccCCCCCCeeEeecccccCcc-----c
Q 008055 2 KTLKYLNIAHN-QLQG----QLNDMFGQLPSLSTLDLSFNTLSG----NLPQSFSSLSSLSSLYLQNNQFSGTI-----D 67 (579)
Q Consensus 2 ~~L~~L~l~~n-~l~~----~~p~~~~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~~-----~ 67 (579)
++|++|+|++| +|.. .+-+.+..=+.|+.|+|++|.|.. .+-..+..-+.|+.|+|++|+|+..- .
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46889999885 7752 245567767789999999998862 23334445678999999999987532 2
Q ss_pred ccCC-CCCCeEEcccCc
Q 008055 68 VLAN-LPLDNLNIANNR 83 (579)
Q Consensus 68 ~~~~-~~L~~l~l~~N~ 83 (579)
.+.. -.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 2322 248899998653
No 436
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.79 E-value=0.043 Score=55.66 Aligned_cols=144 Identities=16% Similarity=0.167 Sum_probs=80.2
Q ss_pred ceeccCCceEEEEEEeCC--------CcEEEEEEeCCCC------------CCch----hHHHHHHHHHHHhhcC-CCCc
Q 008055 277 NLLGEGTFGRVYRAQFAD--------GKVLAVKKIDSSA------------LPSE----MCDDFIEMVSNISQLH-HPNI 331 (579)
Q Consensus 277 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~------------~~~~----~~~~~~~e~~~l~~l~-h~ni 331 (579)
+.|..|-...+|++...+ +..|.+++..... ++++ ..+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999997754 3678888874421 1110 0112334777777663 3334
Q ss_pred cceeeEEeeCCeEEEEEEecCCCChh--hh---------------hcccC-CCCCCC--CHHHHHHHHHHHH--------
Q 008055 332 MELVGYCSEYGQHLLVYEFRKNGSLH--DF---------------LHLSD-EDNKPL--IWNSRVKIALGTA-------- 383 (579)
Q Consensus 332 v~l~~~~~~~~~~~lv~e~~~~gsL~--~~---------------l~~~~-~~~~~l--~~~~~~~i~~~ia-------- 383 (579)
.++++++.. .+|+||++|-+|. ++ +|... ...... .+....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776653 2899999864442 11 11111 111112 2333333333221
Q ss_pred --------------HHHHH----HHhc-CCCCeEEcCCCCCCEEEcCC------CceEEecccccc
Q 008055 384 --------------RALEY----LHEV-CSLSVVHKNIKSANILLDNE------LNPQLSDCGLAS 424 (579)
Q Consensus 384 --------------~~L~~----LH~~-~~~~iiH~Dlkp~Nill~~~------~~~kl~Dfg~~~ 424 (579)
.-+.. |... ....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2221 13468999999999999886 789999998764
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.32 E-value=0.019 Score=58.56 Aligned_cols=91 Identities=7% Similarity=0.020 Sum_probs=70.8
Q ss_pred CCCCcEEeccCCcCC-----CCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCCC
Q 008055 1 MKTLKYLNIAHNQLQ-----GQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLPL 74 (579)
Q Consensus 1 l~~L~~L~l~~n~l~-----~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~L 74 (579)
|++|+.|+|.+|.+. ..-+..|.+|++|+.++|. |+++..-...|.+|.+|+.|+|.+| ++...+ .|..+.|
T Consensus 270 c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L 347 (401)
T 4fdw_A 270 CPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGI 347 (401)
T ss_dssp CTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCC
T ss_pred CCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCC
Confidence 578999999998875 3556789999999999999 4587555678999999999999665 654443 3666689
Q ss_pred CeEEcccCcCCCCCccccc
Q 008055 75 DNLNIANNRFTGWVPEQLK 93 (579)
Q Consensus 75 ~~l~l~~N~l~~~~p~~l~ 93 (579)
+.|++++|.+....+..+.
T Consensus 348 ~~l~l~~n~~~~l~~~~F~ 366 (401)
T 4fdw_A 348 KEVKVEGTTPPQVFEKVWY 366 (401)
T ss_dssp CEEEECCSSCCBCCCSSCC
T ss_pred CEEEEcCCCCccccccccc
Confidence 9999999988644444443
No 438
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.29 E-value=0.083 Score=54.06 Aligned_cols=74 Identities=8% Similarity=0.025 Sum_probs=44.7
Q ss_pred cceeccCCceEEEEEEeCC--------CcEEEEEEeCCCCCCchhHHHHHHHHHHHhhcC-CCCccceeeEEeeCCeEEE
Q 008055 276 ENLLGEGTFGRVYRAQFAD--------GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH-HPNIMELVGYCSEYGQHLL 346 (579)
Q Consensus 276 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 346 (579)
.+.+..|-...+|+....+ +..+++|+..... .. .....+|..+++.+. +.-..++++.+. -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--ch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence 3567778889999998753 5788898864432 11 112235555555553 222345555432 278
Q ss_pred EEEecCCCCh
Q 008055 347 VYEFRKNGSL 356 (579)
Q Consensus 347 v~e~~~~gsL 356 (579)
||||++|.+|
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998653
No 439
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.63 E-value=0.034 Score=49.26 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=49.2
Q ss_pred chhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeeccc-ccCcc-cccCCC-----CCCeEEcccCc-CC
Q 008055 18 LNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQ-FSGTI-DVLANL-----PLDNLNIANNR-FT 85 (579)
Q Consensus 18 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~-~~~~~~-----~L~~l~l~~N~-l~ 85 (579)
+|.....-.+|+.|||+++.++..--..+.+|++|+.|+|+++. |+..- ..+..+ .|+.|+|+++. ++
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 34433333579999999999885544568899999999999985 76532 334432 49999999975 65
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.38 E-value=0.022 Score=51.55 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=57.6
Q ss_pred CCCcEEeccCCcCCC----CchhhhCCCCCCCEEeccCCcCCCC----CCccccCCCCCCeeEeecc---cccCcc----
Q 008055 2 KTLKYLNIAHNQLQG----QLNDMFGQLPSLSTLDLSFNTLSGN----LPQSFSSLSSLSSLYLQNN---QFSGTI---- 66 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N---~l~~~~---- 66 (579)
..|+.|+|++|+|.. .+-+.+..=+.|+.|+|++|.|+.. +-..+..-+.|+.|+|++| .|....
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 478999999999963 3445565668899999999999832 2234555678999999876 333221
Q ss_pred -ccc-CCCCCCeEEcccCcC
Q 008055 67 -DVL-ANLPLDNLNIANNRF 84 (579)
Q Consensus 67 -~~~-~~~~L~~l~l~~N~l 84 (579)
..+ .+..|+.|+++.|.+
T Consensus 150 a~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCCcCeEeccCCCc
Confidence 122 223488899887764
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.21 E-value=0.098 Score=53.04 Aligned_cols=78 Identities=15% Similarity=0.212 Sum_probs=42.1
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
.+|+.+.+.++ ++.+-..+|.++.+|+.++|.++ ++..-..+|.+|.+|+.++|..| ++...+ .|..+. |+.+++
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 45566666544 44333455666666666666543 54333455666666666666555 443322 244443 666666
Q ss_pred ccC
Q 008055 80 ANN 82 (579)
Q Consensus 80 ~~N 82 (579)
..|
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 443
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.66 E-value=0.21 Score=50.59 Aligned_cols=78 Identities=17% Similarity=0.290 Sum_probs=42.0
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
.+|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|.+|.+|+.++|..| ++..-+ .|..+. |+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 45666666655433 334556666667666664 3344333355666666666666543 332222 244443 666666
Q ss_pred ccC
Q 008055 80 ANN 82 (579)
Q Consensus 80 ~~N 82 (579)
..+
T Consensus 342 p~s 344 (394)
T 4gt6_A 342 PSS 344 (394)
T ss_dssp CTT
T ss_pred Ccc
Confidence 433
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.66 E-value=0.1 Score=52.87 Aligned_cols=81 Identities=15% Similarity=0.304 Sum_probs=60.9
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEE
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLN 78 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~ 78 (579)
+.+|+.+.+. +.++..-...|.++.+|+.++|..| ++..-..+|.+|.+|+.+.|..| ++..-. .|..+. |+.++
T Consensus 287 c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 287 CPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIE 363 (394)
T ss_dssp CTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEE
T ss_pred ccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEE
Confidence 3578888886 4566455678999999999999865 66444578999999999999755 654443 366664 99999
Q ss_pred cccCcC
Q 008055 79 IANNRF 84 (579)
Q Consensus 79 l~~N~l 84 (579)
+.+|..
T Consensus 364 ~~~~~~ 369 (394)
T 4gt6_A 364 YSGSRS 369 (394)
T ss_dssp ESSCHH
T ss_pred ECCcee
Confidence 988754
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=91.30 E-value=0.22 Score=49.99 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=56.6
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCcccc-cCCC-CCCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTIDV-LANL-PLDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~-~L~~l~l 79 (579)
.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.+|.+|+.+.|.+|.++...+. |..+ .|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 56788888766 55455667888888998888655 5534446788888999999888888765543 5565 4888888
Q ss_pred ccC
Q 008055 80 ANN 82 (579)
Q Consensus 80 ~~N 82 (579)
..|
T Consensus 318 p~~ 320 (379)
T 4h09_A 318 PTA 320 (379)
T ss_dssp CTT
T ss_pred Ccc
Confidence 654
No 445
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.86 E-value=0.087 Score=53.64 Aligned_cols=29 Identities=28% Similarity=0.370 Sum_probs=24.3
Q ss_pred CeEEcCCCCCCEEE------cCCCceEEecccccc
Q 008055 396 SVVHKNIKSANILL------DNELNPQLSDCGLAS 424 (579)
Q Consensus 396 ~iiH~Dlkp~Nill------~~~~~~kl~Dfg~~~ 424 (579)
.++|+|+.+.|||+ +++..+.++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35799999999999 445779999998875
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.36 E-value=0.31 Score=49.25 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=48.5
Q ss_pred CCCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecc
Q 008055 1 MKTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNN 60 (579)
Q Consensus 1 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 60 (579)
+.+|+.++|.++ ++.+-..+|.++.+|+.++|..| ++..-..+|.+|.+|+.++|..|
T Consensus 319 c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 319 CTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 468999999755 77555788999999999999887 77455678999999999999865
No 447
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=88.89 E-value=0.64 Score=46.54 Aligned_cols=90 Identities=13% Similarity=0.173 Sum_probs=61.2
Q ss_pred CCCcEEeccCCcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeecccccCccc-ccCCCC-CCeEEc
Q 008055 2 KTLKYLNIAHNQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQNNQFSGTID-VLANLP-LDNLNI 79 (579)
Q Consensus 2 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l 79 (579)
.+|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++.... .+..+. |+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 45677777655 44345667888999999999876 56445567888999999998654 443333 355554 999999
Q ss_pred ccCcCCCCCcccccc
Q 008055 80 ANNRFTGWVPEQLKN 94 (579)
Q Consensus 80 ~~N~l~~~~p~~l~~ 94 (579)
.+|.++..-...|.+
T Consensus 294 ~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 294 DNSAIETLEPRVFMD 308 (379)
T ss_dssp CCTTCCEECTTTTTT
T ss_pred cccccceehhhhhcC
Confidence 888876333344444
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.57 E-value=1.5 Score=39.77 Aligned_cols=116 Identities=12% Similarity=0.171 Sum_probs=79.9
Q ss_pred CCCCccceeeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 008055 327 HHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSAN 406 (579)
Q Consensus 327 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iiH~Dlkp~N 406 (579)
.||+++.. .+-.+.+.+.+.++.-+. ...|-. -..++...++.++.+|+...++++ .-+|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecce
Confidence 68888866 566666766666665432 222221 234677889999999988776666 34788999999
Q ss_pred EEEcCCCceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCC
Q 008055 407 ILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFD 476 (579)
Q Consensus 407 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~ 476 (579)
++++.++.+++.=.|+-..+.+ . ..+...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P----------------~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP----------------L-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC----------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCC----------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999988876433322 1 11222224457789999999998884
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.36 E-value=0.84 Score=29.72 Aligned_cols=11 Identities=18% Similarity=0.323 Sum_probs=4.4
Q ss_pred cchhHHHHHHH
Q 008055 150 GIAGILISLFV 160 (579)
Q Consensus 150 ~v~g~~~~~~~ 160 (579)
+++|++.++++
T Consensus 13 IA~gVVgGv~~ 23 (44)
T 2ks1_B 13 IATGMVGALLL 23 (44)
T ss_dssp STHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 33444443333
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.64 E-value=1 Score=29.34 Aligned_cols=23 Identities=30% Similarity=0.499 Sum_probs=10.7
Q ss_pred CCCcchhHHHHHHHHHHHHHHHH
Q 008055 147 GGGGIAGILISLFVVGGIVAFFL 169 (579)
Q Consensus 147 ~~~~v~g~~~~~~~~~~~~~~~~ 169 (579)
+++.++|-++.++++++.+.+++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~ 35 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFM 35 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHHHHHHHHh
Confidence 44445554444445554444443
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.13 E-value=0.081 Score=54.96 Aligned_cols=63 Identities=5% Similarity=0.081 Sum_probs=18.1
Q ss_pred cccceeccCCceEEEEEEeCC-CcEEEE------EEeCCCCCCchhHHHHHHHHHHHhhcCCCCccceeeEEe
Q 008055 274 NVENLLGEGTFGRVYRAQFAD-GKVLAV------KKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCS 339 (579)
Q Consensus 274 ~~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 339 (579)
.+.+.|| ||.||+|.+.. ..+||| |..+......+....|.++..++..++|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999998754 367888 776655555555667888888888899999999987754
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=84.65 E-value=1.2 Score=28.87 Aligned_cols=10 Identities=40% Similarity=0.803 Sum_probs=4.0
Q ss_pred chhHHHHHHH
Q 008055 151 IAGILISLFV 160 (579)
Q Consensus 151 v~g~~~~~~~ 160 (579)
++|++.++++
T Consensus 13 A~gVVgGv~~ 22 (44)
T 2l2t_A 13 AAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred EEeehHHHHH
Confidence 3344433433
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=84.55 E-value=0.44 Score=30.98 Aligned_cols=23 Identities=30% Similarity=0.470 Sum_probs=10.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHHH
Q 008055 147 GGGGIAGILISLFVVGGIVAFFL 169 (579)
Q Consensus 147 ~~~~v~g~~~~~~~~~~~~~~~~ 169 (579)
+++.++|-++.++++++.+.+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~ 34 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYV 34 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeehHHHHHHHHHHHHHHHHh
Confidence 34444444444444444443333
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=84.07 E-value=1.2 Score=28.01 Aligned_cols=15 Identities=27% Similarity=0.751 Sum_probs=8.4
Q ss_pred CCCCcchhHHHHHHH
Q 008055 146 IGGGGIAGILISLFV 160 (579)
Q Consensus 146 ~~~~~v~g~~~~~~~ 160 (579)
.+.+.++|++++.++
T Consensus 8 ls~GaIAGiVvG~v~ 22 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLL 22 (38)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHH
Confidence 445566666665443
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.29 E-value=3.7 Score=37.36 Aligned_cols=115 Identities=14% Similarity=0.175 Sum_probs=77.9
Q ss_pred CCCCccceeeEEeeCCeEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEEcCCCCC
Q 008055 327 HHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALE-YLHEVCSLSVVHKNIKSA 405 (579)
Q Consensus 327 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~iiH~Dlkp~ 405 (579)
.||++ -..+-.+.+.+.+.++.-+++.=+..+ ..++...++.++.+|+.... +++ .-+|=-|.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCc
Confidence 67887 444556777888888765443222233 23677888999998877665 555 4578899999
Q ss_pred CEEEcCCCceEEecccccccCCCCCcccccCCCCCccCccccccCCCCccchHHhHHHHHHHHHhCCCCCC
Q 008055 406 NILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFD 476 (579)
Q Consensus 406 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~elltg~~p~~ 476 (579)
|++++.++.++|.-.|+-..+ +|.- .+..-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL----------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999988864332 2221 1111223456788888998888773
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=78.62 E-value=0.57 Score=29.49 Aligned_cols=25 Identities=28% Similarity=0.365 Sum_probs=17.2
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHH
Q 008055 143 KSGIGGGGIAGILISLFVVGGIVAF 167 (579)
Q Consensus 143 ~~~~~~~~v~g~~~~~~~~~~~~~~ 167 (579)
..+..+++++|.++++.++++++++
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~ 33 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVF 33 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHHHHHHHHHHH
Confidence 4566788889988877766655443
No 457
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=72.68 E-value=4.8 Score=26.08 Aligned_cols=29 Identities=7% Similarity=0.153 Sum_probs=18.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008055 150 GIAGILISLFVVGGIVAFFLVKRRRSRRSS 179 (579)
Q Consensus 150 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (579)
.+++.+++ +++++++.+.+....|+++..
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence 35555555 446666667778887777654
No 458
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=68.23 E-value=2.1 Score=27.32 Aligned_cols=13 Identities=15% Similarity=0.368 Sum_probs=5.6
Q ss_pred cchhHHHHHHHHH
Q 008055 150 GIAGILISLFVVG 162 (579)
Q Consensus 150 ~v~g~~~~~~~~~ 162 (579)
++.+++.++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3444444444444
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=52.46 E-value=13 Score=26.18 Aligned_cols=21 Identities=29% Similarity=0.396 Sum_probs=11.8
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 008055 150 GIAGILISLFVVGGIVAFFLV 170 (579)
Q Consensus 150 ~v~g~~~~~~~~~~~~~~~~~ 170 (579)
+++|.++++++++++.+++..
T Consensus 12 ivlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhh
Confidence 456666666666555555443
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.38 E-value=30 Score=26.85 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=33.8
Q ss_pred CcCCCCchhhhCCCCCCCEEeccCCcCCCCCCccccCCCCCCeeEeec
Q 008055 12 NQLQGQLNDMFGQLPSLSTLDLSFNTLSGNLPQSFSSLSSLSSLYLQN 59 (579)
Q Consensus 12 n~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 59 (579)
..++.+-...|.++.+|+.+.|..+ ++..-...|.+|.+|+.+.|..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3455555677888888888888876 4434456788888888888754
No 461
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=33.56 E-value=44 Score=20.11 Aligned_cols=19 Identities=26% Similarity=0.490 Sum_probs=10.2
Q ss_pred CCCcchhHHHHHHHHHHHH
Q 008055 147 GGGGIAGILISLFVVGGIV 165 (579)
Q Consensus 147 ~~~~v~g~~~~~~~~~~~~ 165 (579)
..+.++|++++-++..+++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i 23 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLI 23 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHH
Confidence 3456677776654443333
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=33.38 E-value=4.5e+02 Score=27.67 Aligned_cols=46 Identities=17% Similarity=0.090 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEEcCCCCCCEEEcCCCceEEecccccc
Q 008055 372 WNSRVKIALGTA--RALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 424 (579)
Q Consensus 372 ~~~~~~i~~~ia--~~L~~LH~~~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~~~ 424 (579)
+..+..++..+| ..+.|+= || +|=.++||||+.+|++.=+|||...
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 455555555443 3456665 44 5778999999999999999999874
No 463
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.88 E-value=1.4e+02 Score=28.95 Aligned_cols=79 Identities=15% Similarity=0.165 Sum_probs=42.9
Q ss_pred eEEEEEEecCCCChhhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEE-cCCCCCCEEEcCCCc-eEEec
Q 008055 343 QHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSL-SVVH-KNIKSANILLDNELN-PQLSD 419 (579)
Q Consensus 343 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~iiH-~Dlkp~Nill~~~~~-~kl~D 419 (579)
..+++|||.+|..|.+.-+.. ....+..+....+ +-+-++.++..+... +.++ .--.+.|||+++++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~--~~~~f~~~~~k~L--G~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS--APEVLTKSTMQQL--GSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS--HHHHSCHHHHHHH--HHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhh--hhhhcCHHHHHhh--chhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 567999999976665432210 0011222222211 123356676655322 1111 124788999987554 88999
Q ss_pred cccccc
Q 008055 420 CGLASN 425 (579)
Q Consensus 420 fg~~~~ 425 (579)
-+++..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 988754
No 464
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=25.79 E-value=68 Score=22.88 Aligned_cols=20 Identities=15% Similarity=0.197 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHhhhcC
Q 008055 157 SLFVVGGIVAFFLVKRRRSR 176 (579)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~ 176 (579)
++.++.++++.+||..|-.|
T Consensus 23 avaalg~li~gcwcylrlqr 42 (90)
T 1zza_A 23 AIAALGALILGCWCYLRLQR 42 (90)
T ss_dssp HHHHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444555555666554443
No 465
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=24.59 E-value=80 Score=23.28 Aligned_cols=6 Identities=0% Similarity=0.097 Sum_probs=2.3
Q ss_pred hhHHHH
Q 008055 152 AGILIS 157 (579)
Q Consensus 152 ~g~~~~ 157 (579)
.|++.+
T Consensus 15 ~gvi~g 20 (79)
T 2knc_B 15 LSVMGA 20 (79)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
Done!