BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008056
(579 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IQV7|SCY2_ARATH Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis
thaliana GN=SCY2 PE=2 SV=1
Length = 575
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/545 (73%), Positives = 470/545 (86%), Gaps = 5/545 (0%)
Query: 38 LCTKTFVSVRLSLLDSKRRQ---VPLLNRPFLSRANKRYSVYSSDQLRSDYVNVEASSAL 94
LC++ + +L S+ RQ + + R L + K +S+ SD+ R D ++ E
Sbjct: 33 LCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTD 92
Query: 95 SVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKS 154
++++E +PP D +SQ N +PK ++NRFL+F+R+SSVLN AAE FFKS
Sbjct: 93 ALDVEIIPPDSQDIRNSQN--SAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKS 150
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
EIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV+ELG+FGAE+KLS FQ
Sbjct: 151 EIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQ 210
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSYIWW+S FAI+EA++VA S
Sbjct: 211 LGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTS 270
Query: 275 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 334
L YS++AA+ VKHVM+T+ LLVCGAMTM+W+CDTISESGFG GSSLIICVGILTGYTET
Sbjct: 271 LQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTET 330
Query: 335 LYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDS 394
L+KML+Q+ GS W P++LGLLG+FT+VTM+AVVVTEGCRK+KLQYYGFKLASA+RE S
Sbjct: 331 LHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGS 390
Query: 395 PITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARP 454
PITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILASILGSPF ++KEILNPE++VGA P
Sbjct: 391 PITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPP 450
Query: 455 WVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFW 514
WVYY+IYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN+KPGKATIEYLTKIQASTRFW
Sbjct: 451 WVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQASTRFW 510
Query: 515 GGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKAL 574
GGLLLS LAT+ST+LDHYLR IN+GFSIGFTSVLIIVGSIIELRRSY AYNVMPSLSKAL
Sbjct: 511 GGLLLSFLATASTVLDHYLRSINQGFSIGFTSVLIIVGSIIELRRSYHAYNVMPSLSKAL 570
Query: 575 RRYGV 579
+RYGV
Sbjct: 571 KRYGV 575
>sp|P0A4H1|SECY_SYNP6 Protein translocase subunit SecY OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1
Length = 439
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 33/435 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 376 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGAR 490
+ + L+P G PW+Y Y + F+ F I N P ++A L KMG+
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNLKKMGSS 354
Query: 491 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLI 549
IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G TS+LI
Sbjct: 355 IPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--GATSLLI 412
Query: 550 IVGSIIELRRSYQAY 564
+VG I+ + Q Y
Sbjct: 413 LVGVAIDTAKQVQTY 427
>sp|P0A4H0|SECY_SYNE7 Protein translocase subunit SecY OS=Synechococcus elongatus (strain
PCC 7942) GN=secY PE=3 SV=1
Length = 439
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 33/435 (7%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 375
G G+SL+I + I+ +L + L ++ LL VF + V V EG R
Sbjct: 186 GNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTR 245
Query: 376 KVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG 433
++ + SA R+ + +E Y+P +N G+ P++ + +L P LA+
Sbjct: 246 RI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTS 298
Query: 434 SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD---IANLPKEIADYLNKMGAR 490
+ + L+P G PW+Y Y + F+ F I N P ++A L KMG+
Sbjct: 299 NEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNLKKMGSS 354
Query: 491 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLI 549
IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G TS+LI
Sbjct: 355 IPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--GATSLLI 412
Query: 550 IVGSIIELRRSYQAY 564
+VG I+ + Q Y
Sbjct: 413 LVGVAIDTAKQVQTY 427
>sp|O66491|SECY_AQUAE Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5)
GN=secY PE=1 SV=1
Length = 429
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 226/439 (51%), Gaps = 37/439 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 210
E+R++ T ++ VI R+G IP+PG + + +D+L GSV L D G L +L
Sbjct: 12 KELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNLGRL 70
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 269
+ F LG+ P I ASI+MQ+L +PSL +L KE D G KI Y +++L A ++++
Sbjct: 71 TVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLG 130
Query: 270 VACY----SLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+A + P I + + +++T LV G M + WI D I+E G G G+SLII
Sbjct: 131 IAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIF 190
Query: 325 VGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYG 383
GI+ + + + ++ + P L L+ I + +V V E R++ +QY G
Sbjct: 191 AGIVANFPNAVIQFYEKVKTGDI--GPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPG 248
Query: 384 FKLAS---AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
++ A R+ Y+P INP+G+ P++ LL PS L + + +PF + +
Sbjct: 249 RQVGRQLYAGRKT--------YLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVI 300
Query: 441 KEILNPETSVGARPWVYYT-IYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPG 497
++ P GA ++Y +Y F+ F F A L P E+A+ L+K GA IP V+PG
Sbjct: 301 ADMFQP----GA---IFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPG 353
Query: 498 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 557
+ T++YL +I F+G L LS++A ++ + N F G T+ LI+VG ++
Sbjct: 354 QDTVKYLERIINRLIFFGALFLSVIALIPILISVWF---NIPFYFGGTTALIVVGVALDT 410
Query: 558 RRSYQAYNVMPSLSKALRR 576
R + Y + +RR
Sbjct: 411 FRQIETYLIQKKYKSYVRR 429
>sp|Q1XDJ1|SECY_PORYE Protein translocase subunit SecY OS=Porphyra yezoensis GN=secY PE=3
SV=1
Length = 411
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 220/427 (51%), Gaps = 45/427 (10%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L IVP+L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKPY---VFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F + +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ASYSNASLKFGLF----IAIFLLMIIITICVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A PS L I+ +
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 497
+ + P S+ Y +Y + F+ F I P++IA L KMGA IPN++PG
Sbjct: 281 ILYLFCPNGSL------YLLLYCALILFFSYFYTSIVMNPEDIAINLKKMGASIPNIRPG 334
Query: 498 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 557
+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I+
Sbjct: 335 QATIDYLQVILNRLTFLGASFLFTVALIPFIIEK-VTQIQNLRGLGATSLLILVGVAIDT 393
Query: 558 RRSYQAY 564
+ Q Y
Sbjct: 394 AKQIQTY 400
>sp|P51297|SECY_PORPU Protein translocase subunit SecY OS=Porphyra purpurea GN=secY PE=3
SV=1
Length = 411
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 222/427 (51%), Gaps = 45/427 (10%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T +L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L I+P L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKPY---VFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTG----YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
I++G +T++ + + +S+++ F++ +F ++ + + V EG R++K+
Sbjct: 173 FQNIVSGLPKNFTQSFFD--ANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI 226
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 439
+++ S I + Y+P +N G+ P++ + +A P+ L + + F
Sbjct: 227 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQ 280
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPG 497
V + P S+ Y +Y+ + F+ F I P++IA L KMGA IPN++PG
Sbjct: 281 VLYLFCPNGSL------YLVLYSVLILFFSYFYTSIVMNPEDIATNLKKMGASIPNIRPG 334
Query: 498 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIEL 557
+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I+
Sbjct: 335 QATIDYLQVILNRLTFLGATFLFTVALIPFIIEK-VAQIQNLRGLGATSLLILVGVAIDT 393
Query: 558 RRSYQAY 564
+ Q Y
Sbjct: 394 AKQIQTY 400
>sp|Q05217|SECY_STACT Protein translocase subunit SecY OS=Staphylococcus carnosus (strain
TM300) GN=secY PE=3 SV=2
Length = 430
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 209/424 (49%), Gaps = 23/424 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQ-LLGSS--VRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
GIL+ +L + Q +G S W + GL+ ++TM AV V + RK+ +Q
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQ 244
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-QH 439
Y K S R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 245 YA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQ 298
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 499
+ NP +++G +Y + F + + + P++++D L K G+ +P ++PG+
Sbjct: 299 IANTANPSSNIGMV--IYIILIIAFTYFYAFVQVN--PEKMSDNLKKQGSYVPGIRPGEQ 354
Query: 500 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 559
T +Y+TK+ F G + L+++A + ++ + + +G TS+LI++G IE +
Sbjct: 355 TKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-NLPQSIQVGGTSLLIVIGVAIETMK 413
Query: 560 SYQA 563
S +A
Sbjct: 414 SLEA 417
>sp|Q8CNF3|SECY_STAES Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=secY PE=3 SV=1
Length = 430
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 28/425 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 498
++ + NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 298 NIADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGE 353
Query: 499 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 558
T +Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE
Sbjct: 354 QTKKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETM 412
Query: 559 RSYQA 563
++ +A
Sbjct: 413 KTLEA 417
>sp|Q5HM19|SECY_STAEQ Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=secY PE=3 SV=1
Length = 430
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 28/425 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLL----GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKL 379
GIL+ +L + + +S+ W +LGL+ ++T+ A+ V E RK+ +
Sbjct: 185 FAGILSTLPSSLEQFAQSVFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKIPI 243
Query: 380 QYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW-Q 438
QY K SA R S T Y+P +N +G+ PV+ P L W Q
Sbjct: 244 QYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQ 297
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 498
++ + NP +++G +Y + F + + + P+++AD L K G+ +P ++PG+
Sbjct: 298 NIADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRPGE 353
Query: 499 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELR 558
T +Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE
Sbjct: 354 QTKKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIETM 412
Query: 559 RSYQA 563
++ +A
Sbjct: 413 KTLEA 417
>sp|Q7A086|SECY_STAAW Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MW2) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q6G791|SECY_STAAS Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MSSA476) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q6GEK3|SECY_STAAR Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MRSA252) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q7A468|SECY_STAAN Protein translocase subunit SecY OS=Staphylococcus aureus (strain
N315) GN=secY PE=1 SV=1
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q99S39|SECY_STAAM Protein translocase subunit SecY OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|Q5HDX8|SECY_STAAC Protein translocase subunit SecY OS=Staphylococcus aureus (strain
COL) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|O08387|SECY_STAA8 Protein translocase subunit SecY OS=Staphylococcus aureus (strain
NCTC 8325) GN=secY PE=3 SV=2
Length = 430
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKM-LSQLLG---SSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
S+II GIL+ +L + + +G +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLK-VLGLLVSLILLTVGAIYVLEAV 238
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 239 RKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPD 292
Query: 435 PFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN 493
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +P
Sbjct: 293 KEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYVPG 348
Query: 494 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 553
++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++G
Sbjct: 349 IRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVIGV 407
Query: 554 IIELRRSYQA 563
IE +S +A
Sbjct: 408 AIETMKSLEA 417
>sp|P28527|SECY_GUITH Protein translocase subunit SecY OS=Guillardia theta GN=secY PE=3
SV=2
Length = 420
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 218/430 (50%), Gaps = 30/430 (6%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
+N + +S K +++ R+ T LIV+SR+G F+P+PG D Q +S + V+ L
Sbjct: 1 MNTSIKSIKKQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIIS--NPLVNFLNV 58
Query: 204 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISL 260
F G + F LGI P I ASI++Q+ + +PSL +L+KE G G +KI +++L
Sbjct: 59 FSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVAL 118
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+A+++++ V+ + PY + + V + L G+M + W + I+E G G G S
Sbjct: 119 VWALIQSIGVSFWVRPY---VFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPS 175
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV------TEGC 374
L+I + I++G L +LL S ++ + L +F +V +++V++ EG
Sbjct: 176 LLIFINIISG--------LPKLLQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGI 227
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
+++ + +++ + Y+P +N SG+ P++ + +L P+ LA ++ +
Sbjct: 228 KRIPI------ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSN 281
Query: 435 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 494
+ V + + ++ ++Y F F I N P +++ L KM + I V
Sbjct: 282 EQLRTVLHLFDGTSNNKLLYLLFYFTLILFFSYFYTSLILN-PNDVSKNLKKMESSIYGV 340
Query: 495 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 554
+PGKAT EYL K F G L L+ +A I++ L ++ +G TS+LIIVG
Sbjct: 341 RPGKATTEYLQKTLNRLTFLGALFLAFIAIVPNIIET-LTNLSVFKGLGGTSLLIIVGVQ 399
Query: 555 IELRRSYQAY 564
++ + Q Y
Sbjct: 400 VDTSKQIQTY 409
>sp|P38397|SECY_PYRSA Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina
GN=secY PE=3 SV=1
Length = 412
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 213/424 (50%), Gaps = 44/424 (10%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSFVSGSVDELGDF 204
K I+ R+F+T L+V+SR+G FIP+PG D Q +L+ SG G F
Sbjct: 10 KEGIKERIFLTIGLLVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSG-----GGF 64
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ + F LGI P I ASI++Q+ +P+L +L+K EG G +KI + +LG+A
Sbjct: 65 AS---IGIFALGIVPYINASIVIQLATTSIPNLEKLQKEEGEAGRQKISQITRYRALGWA 121
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++ V+ + PY S V + + L G+M + W + I+E G G G SL+I
Sbjct: 122 AIQSLGVSFWVRPYVFNWDSQFVVQMTLA---LTTGSMLIMWFSEQITEKGIGNGPSLLI 178
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYG 383
+ I+ G + L + S + S+ + +V + ++ V + ++ + Y
Sbjct: 179 FINIIAGLPK-LIQQKSNAISSTNQ----------TTELVVLASISVYDSRIFIRDRRY- 226
Query: 384 FKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEI 443
+ L + R + Y+P +N G+ P++ + +L P+ L ++ + F + +
Sbjct: 227 YILQTVGRH----CKQTSYLPLRLNQGGVMPIIFASAILVLPAYLGQVIQNQFVLKLVTL 282
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL---PKEIADYLNKMGARIPNVKPGKAT 500
L+P +S Y I+ F + LF + A+L P +++ L KM + IP V+PGKAT
Sbjct: 283 LSPNSSDKN----LYLIFYFSLILFFSYFYASLIINPNDVSQNLKKMESSIPGVRPGKAT 338
Query: 501 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 560
+YL K F G L L+ +A +I+++ + I+ +G TS+LI+VG I+ R
Sbjct: 339 TDYLQKTLNRLTFLGALFLAFIAVVPSIIEN-ITSISTFKGLGATSLLILVGVAIDTSRQ 397
Query: 561 YQAY 564
Q Y
Sbjct: 398 IQTY 401
>sp|P28539|SECY_CHLTR Protein translocase subunit SecY OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=secY PE=3 SV=3
Length = 457
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 220/447 (49%), Gaps = 45/447 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 422
V++ EG RK+ +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGMRKIPVQH--------ARRIIGRREVVGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 423 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 478
FP+ + L S + + + +L+P + Y Y + F F A P+
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------AYSIFYVLLIIFFTYFWTATQFRPE 351
Query: 479 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 537
+IA + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 352 QIASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDAN 411
Query: 538 EGFSIGFTSVLIIVGSIIELRRSYQAY 564
+ +G T++LI+VG I++ + A+
Sbjct: 412 VSYFLGGTAMLIVVGVILDTMKQIDAF 438
>sp|P43804|SECY_HAEIN Protein translocase subunit SecY OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=secY PE=3 SV=1
Length = 441
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQYYGFKLA 387
G + + + Q + P +L L+ VT + V V G R+++++Y A
Sbjct: 195 AGLPSAILQTIEQ--ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY-----A 247
Query: 388 SAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFWQHVKEI 443
+ + ++P +N + + P + + ++ FP+ L G + ++ +
Sbjct: 248 KRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSML 307
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKATI 501
LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++PG+ T
Sbjct: 308 LNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTS 361
Query: 502 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 561
Y+ K+ GGL ++ + I+ + F G TS+LI+V I++
Sbjct: 362 RYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIMDFIVQV 418
Query: 562 QAYNVMPSLSKALRR 576
Q++ + AL++
Sbjct: 419 QSHLMSSQYESALKK 433
>sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays
GN=SECY PE=2 SV=1
Length = 553
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 203/419 (48%), Gaps = 26/419 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 135 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 192
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++A
Sbjct: 193 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 252
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 253 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 328 LTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLA 387
++ + + ++Q + +L ++ F ++ + V V E RK+ L Y
Sbjct: 310 ISYLPASFGRTVAQAFQDG--NYVGLLTIILSFLLLVLGIVYVQEAERKIPLNY------ 361
Query: 388 SAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F + LN
Sbjct: 362 -ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALN 420
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 505
P ++ V + AFF + + + P ++++ L + GA IP V+PGK+T Y+
Sbjct: 421 PGGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAYIK 476
Query: 506 KIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 563
+ G L++LA ++++ GF+ TSVLI+VG + R QA
Sbjct: 477 TVLNRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFA--GTSVLILVGCATDTARKVQA 533
>sp|Q59912|SECY_STRGB Protein translocase subunit SecY OS=Streptomyces galbus GN=secY
PE=3 SV=1
Length = 437
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 211/438 (48%), Gaps = 30/438 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNV-QQCVREASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILE--AVIVACYSLPY----SIYAASHSVKHVMVTAFLLVC---GAMTMSWICD 308
+++ AIL+ ++ S P S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q G+ W ++ V I+ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GTLAGGWIEFGTVIAVGLIMVALVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALV 292
Query: 429 ASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLN 485
A G+ W K + + G P +Y Y + F F +A P+E+AD +
Sbjct: 293 AQFAGGNSGW---KSWVEQNLTKGDHP-IYIVTYFLLIVFFAFFYVAISFNPEEVADNMK 348
Query: 486 KMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFT 545
K G IP ++ G+ T EYL+ + + G L L ++A T+ ++ F G T
Sbjct: 349 KYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQNFPFGGT 407
Query: 546 SVLIIVGSIIELRRSYQA 563
S+LIIVG +E + ++
Sbjct: 408 SILIIVGVGLETVKQIES 425
>sp|P77964|SECY_SYNY3 Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=secY PE=3 SV=1
Length = 442
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 216/440 (49%), Gaps = 41/440 (9%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + + +R RL +T L+++ R+G FIP+P DR+ Q +L+
Sbjct: 10 SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+G G + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTG--------GGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
Y +I+ G+ I++ + + L YA ++ + T + G+M + WI + I+E
Sbjct: 122 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 372
G G G+SL+I V I+ +TL + + + ++ L+ VF ++ + V V E
Sbjct: 180 RGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGIVFVQE 239
Query: 373 GCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
G R++ + SA R+ E Y+P +N G+ P++ + +L PS LA
Sbjct: 240 GTRRIPI-------ISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAG 292
Query: 431 I-LGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPKEIADYL 484
G+ EI + S RP WVY +Y+ +F F+ F I N P++++ L
Sbjct: 293 FATGNEGLGGFGEIF-VQISNALRPGTWVYTVVYSVMIFFFSYFYASLIVN-PEDVSKNL 350
Query: 485 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 544
KMG+ IP ++PGK T +YL + F G + LS +AT ++ + +G
Sbjct: 351 KKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQ-ATGVTTFQGLGA 409
Query: 545 TSVLIIVGSIIELRRSYQAY 564
TS+LI+VG I+ + Q Y
Sbjct: 410 TSLLILVGVAIDTAKQIQTY 429
>sp|Q9PJN1|SECY_CHLMU Protein translocase subunit SecY OS=Chlamydia muridarum (strain
MoPn / Nigg) GN=secY PE=3 SV=1
Length = 457
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 220/447 (49%), Gaps = 45/447 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T ++ G + + WI +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LGS---SVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +G+L + L + ++L LGS S +L L VF V M
Sbjct: 186 ISDKGIGNGISLIITLGMLASFPSVLGSIFNKLNLGSQDPSEFGIVSLLVLCAVFVFVLM 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLTTTYLL 422
V++ EG RKV +Q+ AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 ATVLIIEGVRKVPVQH--------ARRIIGRREVLGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 423 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 478
FP+ + L S + + + +L+P + VY Y + F F A P+
Sbjct: 298 MFPATIGQFLSSESSWLKRIATMLSPGSV------VYSIFYVLLIIFFTYFWTATQFRPE 351
Query: 479 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 537
+IA + K GA IP ++ GK T YL G + L+++A +IL LR N
Sbjct: 352 QIASEMKKNGAFIPGIRQGKPTQSYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVDAN 411
Query: 538 EGFSIGFTSVLIIVGSIIELRRSYQAY 564
+ +G T++LI+VG +++ + A+
Sbjct: 412 VSYFLGGTAMLIVVGVVLDTMKQIDAF 438
>sp|P46249|SECY_CYACA Protein translocase subunit SecY OS=Cyanidium caldarium GN=secY
PE=2 SV=2
Length = 410
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 26/417 (6%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 212
++ +R RLF T I + R+G F+P+PG D++L DY + ++ + D KLS
Sbjct: 4 ENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSV 63
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLR-KEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I A+I +Q+L P+L +L+ +EG G +K+ ++S FA +E++ +
Sbjct: 64 FALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIV 123
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L YA ++ ++ T +L+ GAM + W+ D IS G G G+S+II V I + +
Sbjct: 124 ---LRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF 180
Query: 332 TETLYKMLSQLLGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAA 390
+ L L+QL S+++ F L VF+I + V V E RKV + +++
Sbjct: 181 AKFL---LNQLFVHSIKFLDFASYFALIVFSIACI--VFVQEAIRKVPI------ISAKQ 229
Query: 391 REDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSV 450
+ + + ++P IN G+ P++ + LLA + G Q V I +
Sbjct: 230 LDSTSFYSNDYFLPLRINQGGVMPIILASSLLALVDYVIR-YGLSTLQAVYFI----NDI 284
Query: 451 GARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIEYLTKIQ 508
++ +Y+ F+ FN + + E+++ L K IP+++PGK T ++
Sbjct: 285 LPFKILFLLLYSAFIIFFNYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEKFFKDTL 344
Query: 509 ASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 564
+ +G L+ + + L+ R+ +G ++ +S+LI+VG I+L + + Y
Sbjct: 345 DNLTLFGSGFLAFIVLAPNFLEFVFHIRVFKGLAV--SSLLIVVGVAIDLIKQSKTY 399
>sp|Q6ZG25|SECY_ORYSJ Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa
subsp. japonica GN=SECY PE=2 SV=1
Length = 556
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 24/418 (5%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 138 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG- 195
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++A
Sbjct: 196 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQA 255
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 256 IGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 312
Query: 328 LTGYTETLYKMLSQLL--GSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFK 385
++ + + ++Q G+ V +L F + + V V E RK+ L Y
Sbjct: 313 ISYLPASFGRTVAQAFQDGNYVGLLTIILS----FLFLVLGIVYVQEAERKIPLNY---- 364
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILN 445
AS S + Y+PF +N SG+ P++ +T LA P LA G F + LN
Sbjct: 365 -ASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLN 423
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 505
P ++ V + AFF + + + P ++++ L + GA IP V+PGK+T ++
Sbjct: 424 PGGALYIPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTAAFIK 479
Query: 506 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQA 563
+ ++ G L++LA ++++ + + TSVLI+VG + R QA
Sbjct: 480 TVLSNISVLGSAFLAVLAAGPSVVEQ-ITHLTAFRGFAGTSVLILVGCATDTARKVQA 536
>sp|F6CD01|SECY1_LACKZ Protein translocase subunit SecY 1 OS=Lactobacillus kefiranofaciens
(strain ZW3) GN=secY PE=3 SV=1
Length = 431
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 213/430 (49%), Gaps = 27/430 (6%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGINVKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAV--IVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLL---GSSVRWWP--FMLGLLGVFTIVTMWAVVVTEG 373
S+II GI+ LY++ + + +S RW F + ++ IVT V +
Sbjct: 179 VSVIIFAGIIARLPSGLYQIYKEEIINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQA 238
Query: 374 CRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILASIL 432
R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL +
Sbjct: 239 DRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILMAFQ 289
Query: 433 GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGAR 490
+ Q +++N S+ P V IY + LF F + P+++A+ L K GA
Sbjct: 290 RTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQGAY 347
Query: 491 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 550
IP+V PGK T +Y++K+ G + L ++A + ++ + +G TS+LI+
Sbjct: 348 IPSVWPGKDTQDYVSKMLIKLSTVGSIFLGLVALLPQLATNFW-NLPSSIGLGGTSLLIV 406
Query: 551 VGSIIELRRS 560
+G ++EL R
Sbjct: 407 IGVVLELSRQ 416
>sp|Q9XQU4|SECY_PEA Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum
GN=SECY PE=2 SV=1
Length = 527
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 199/426 (46%), Gaps = 40/426 (9%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 201
FF + + + +SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 111 FFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRL 170
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 260
G LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+
Sbjct: 171 G---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASV 221
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
GFAI++A+ + PY A + + + + LL G++ ++I + I+E G G+S
Sbjct: 222 GFAIVQAIGQVLFLRPY---ANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTS 278
Query: 321 LIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 380
L+I I++ + + SQ + + ++ ++ F ++ + V V E RK+ +
Sbjct: 279 LLIFTNIISYLPASFGRTFSQAFSDA--NYVGLVTIIVSFFLLVLGIVYVQEAERKIPIN 336
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y AS S E Y+PF +N SG+ P++ +T LA P LA G +
Sbjct: 337 Y-----ASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTA 391
Query: 441 KEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 498
LNP G ++ + I AFF + + + P ++++ L + GA IP V+PGK
Sbjct: 392 AVALNP----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGK 445
Query: 499 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIEL 557
+T ++ + + G L+ILA +++ GF+ TS+LI+VG +
Sbjct: 446 STATFIKTVLSRISVLGSTFLAILAAGPAVVEQTAHLTAFRGFA--GTSILILVGCATDT 503
Query: 558 RRSYQA 563
R +A
Sbjct: 504 ARKVRA 509
>sp|P38376|SECY_CORGL Protein translocase subunit SecY OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=secY PE=3 SV=1
Length = 440
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 204/430 (47%), Gaps = 46/430 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 262 FAILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G SL+I GI T +L G F + L V I+ + V V +G
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILGNSGGVV-----FAVVLASVL-ILVIGVVFVEQGQ 237
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 434
R++ +QY + S Y+P +N +G+ PV+ + L+ P ++ I+ S
Sbjct: 238 RRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNS 292
Query: 435 P-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADY 483
+WQ + + P + W Y +Y F+ F + P E A+
Sbjct: 293 GSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYFYVSVQYDPAEQAEN 346
Query: 484 LNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRINEGFS- 541
+ K G IP ++PG+ T EYL + F G L L+++A I LD + + G +
Sbjct: 347 MKKYGGFIPGIRPGRPTAEYLGFVMNRLLFVGSLYLAVIAVLPNIMLDLGVDAGSAGATP 406
Query: 542 IGFTSVLIIV 551
G T++LI+V
Sbjct: 407 FGGTAILILV 416
>sp|Q9X1I9|SECY_THEMA Protein translocase subunit SecY OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=secY PE=1
SV=1
Length = 431
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 211/431 (48%), Gaps = 46/431 (10%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDFGA 206
E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D GA
Sbjct: 13 ELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDVFTG-GA 71
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+ S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L +
Sbjct: 72 LSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQ 131
Query: 267 AVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
A V+ S P + + ++ +++ ++ G M + W+ + I+E G G G S++I
Sbjct: 132 AFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGNGISILI 191
Query: 324 CVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYY 382
GI+ Y Y + L G ++ W F++ + ++T++ ++ V + R++ +QY
Sbjct: 192 FAGIVARYPS--YIRQAYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERRITIQY- 244
Query: 383 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKE 442
A Y+P +N G+ P++ + +++ PS +ASI + + +K
Sbjct: 245 ----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN---ETLKN 297
Query: 443 ILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGARIPNVKP 496
+ A ++Y IY VF F IFD P+EI++ + K G IP ++P
Sbjct: 298 LFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISENIRKYGGYIPGLRP 347
Query: 497 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 556
G++T +YL ++ F G + L ++A ++ I IG TS LI VG ++
Sbjct: 348 GRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQG---AIKVNVWIGGTSALIAVGVALD 404
Query: 557 LRRSYQAYNVM 567
+ + + + VM
Sbjct: 405 IIQQMETHMVM 415
>sp|Q59916|SECY_STRGR Protein translocase subunit SecY OS=Streptomyces griseus GN=secY
PE=3 SV=1
Length = 437
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 199/436 (45%), Gaps = 36/436 (8%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSG 65
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ AI
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAI 125
Query: 265 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
L+ + + +++ A S+ ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTPPVMWLGELITDRGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 374
G G S+ + + I + L+ + S L W F +L F +V + V V +
Sbjct: 186 GNGMSIPMFISIAATFPGALWAIKESGKLADG--WIEFGTVILIGFVMVAL-VVFVEQAQ 242
Query: 375 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA----S 430
R++ +Q L YIP +N +G+ PV+ + LL P+++ S
Sbjct: 243 RRIPVQ-----LPKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 297
Query: 431 ILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIADYLNKM 487
G W + G P+ Y+ + FF F + I+ P E+AD + K
Sbjct: 298 QAGWATW------IQDNFVTGDHPYYIATYFVLIVFFAFFY--VAISFNPDEVADNMKKY 349
Query: 488 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 547
G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G TS+
Sbjct: 350 GGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPFGGTSI 409
Query: 548 LIIVGSIIELRRSYQA 563
LIIVG +E + ++
Sbjct: 410 LIIVGVGLETVKQIES 425
>sp|A3CK84|SECY_STRSV Protein translocase subunit SecY OS=Streptococcus sanguinis (strain
SK36) GN=secY PE=3 SV=1
Length = 435
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 217/440 (49%), Gaps = 50/440 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
++F ++R ++ T +I++ RIG I +PG + + + + LS VSG+
Sbjct: 8 DAFKIKQVRSKILFTIFIILVFRIGTTITVPGINAKALSNLNDLPFLNMLSLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +I+L
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYIAL 119
Query: 261 GFAILEAV-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++A+ I A + +L + A+ +V+ + LL G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQAIGITAGFDTLSRANLVANPNVQTYALICVLLATGSMIVTWLGEQITDKGYGNG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
S+II GI++ Y + + S+ L SS + F+ L+ ++ + V
Sbjct: 180 VSMIIFAGIVSAIPDMIKGIYEDYFVNIPSERLTSS---FIFVGILIVAVLLIIYFTTFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-- 428
+ K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ +
Sbjct: 237 QQAEYKIPIQYT--KVAKGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQ 287
Query: 429 -ASILG-SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYL 484
S LG W + L T++ +YAF + LF F + P++ A+ L
Sbjct: 288 VVSALGYDADWVKTAQSLLATTTISGM-----FMYAFLIVLFTFFYTFVQINPEKTAENL 342
Query: 485 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 544
K GA IP V+PGK T +Y++K+ G L L ++ IL + + + ++G
Sbjct: 343 QKSGAYIPGVRPGKGTEDYMSKLLRRLATVGSLFLGFISILP-ILAKDVFGLTDAVALGG 401
Query: 545 TSVLIIVGSIIELRRSYQAY 564
TS+LII+ + IE + + Y
Sbjct: 402 TSLLIIISTGIEGMKQLEGY 421
>sp|Q38885|SCY1_ARATH Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis
thaliana GN=SCY1 PE=1 SV=2
Length = 551
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 200/423 (47%), Gaps = 34/423 (8%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDF 204
FFK + + + +SR+G +IPL G +R +FV G++D+ L F
Sbjct: 133 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRE-------AFV-GNLDQNSILSTLDTF 184
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+G
Sbjct: 185 SGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASVG 244
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI++A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL
Sbjct: 245 FAIVQAIGQVFYLRPY---VNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSL 301
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGV-FTIVTMWAVVVTEGCRKVKLQ 380
+I I++ + + ++ L LG + V F ++ + V V E RK+ L
Sbjct: 302 LIFTSIISYLPASFGRTTAEALQEGNYTG---LGTIVVSFLLLVLGIVYVQEAERKIPLN 358
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHV 440
Y AS + + Y+PF +N +G+ P++ +T LA P+ LA G ++V
Sbjct: 359 Y-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNV 413
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 500
L P S + + AFF + + + P ++++ L + GA IP V+PGK+T
Sbjct: 414 AFALTPGGSFYLPTNIL--LIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGKST 469
Query: 501 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRS 560
++ + G L++LA +++ + + TSVLI+VG + R
Sbjct: 470 ALFIKTVLGRISVLGSAFLAVLAAGPAVVEQ-ITHLTAFRGFAGTSVLILVGCATDTARK 528
Query: 561 YQA 563
QA
Sbjct: 529 VQA 531
>sp|Q5SHQ8|SECY_THET8 Protein translocase subunit SecY OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secY PE=1 SV=1
Length = 438
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 194/433 (44%), Gaps = 26/433 (6%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+R+ T +++ R+G FIP PG D I Q++L G V + + G + S
Sbjct: 13 ELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKI-QEFLRTAQGGVFGIINLFSGGNFERFS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY--IWWISLGF---AILE 266
F LGI P I A+I+MQ+L +VP+L +L KEG +G I Y I I+LG L
Sbjct: 72 IFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLA 131
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ + + S V V G + W+ + I+E G G G+SLII G
Sbjct: 132 TAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAG 191
Query: 327 ILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKL 386
I+ + + + + + V F+ L + V + R++ +QY
Sbjct: 192 IVVEWLPQILRTIGLIRTGEVNLVAFLF-FLAFIVLAFAGMAAVQQAERRIPVQY----- 245
Query: 387 ASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQHVKEILN 445
A YIP +N +G+ P++ +L P LA+ +P Q + N
Sbjct: 246 ARKVVGRRVYGGQATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQGIANFFN 305
Query: 446 PETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLT 505
P G V I +V+ FD PK IA+ L + G IP ++PG+ T+++L
Sbjct: 306 PTRPSGLFIEVLLVILFTYVYTAVQFD----PKRIAESLREYGGFIPGIRPGEPTVKFLE 361
Query: 506 KIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV--LIIVGSIIELRRSYQA 563
I + WG L L ++ T+L ++ + SI F+ + LI+VG ++ R ++
Sbjct: 362 HIVSRLTLWGALFLGLV----TLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVES 417
Query: 564 YNVMPSLSKALRR 576
++ S L R
Sbjct: 418 QLMLRSYEGFLSR 430
>sp|P78283|SECY_VIBCH Protein translocase subunit SecY OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secY PE=3
SV=2
Length = 444
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 201/425 (47%), Gaps = 31/425 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RLF +++ R G F+P+PG D ++ + + G++ E+ + GA +
Sbjct: 17 SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQ-QKGTIVEMFNMFSGGALERA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + ++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 136 AT-GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 194
Query: 329 TGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + Q + +L + F ++ + V + G R++ + Y A
Sbjct: 195 AGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVI-YFVVFMERGQRRIVVNY-----AK 248
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF-W-QHVK 441
+ ++P IN +G+ P + + ++ FP LA G S F W V
Sbjct: 249 RQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVS 308
Query: 442 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVKPGKA 499
L+P +P +Y +YA + F F A + P+E AD L K GA +P ++PG+
Sbjct: 309 LALSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQ 362
Query: 500 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 559
T +Y+ K+ G L ++ + I + + N F G TS+LI+V I++
Sbjct: 363 TAKYIDKVMTRLTLAGALYITFIC---LIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMA 419
Query: 560 SYQAY 564
Q +
Sbjct: 420 QVQTH 424
>sp|P43416|SECY_STRSC Protein translocase subunit SecY OS=Streptomyces scabies GN=secY
PE=3 SV=1
Length = 437
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 207/435 (47%), Gaps = 24/435 (5%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDE 200
+L A +F ++R++L T +IVI RIG IP+PG D + D SG
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYSAVQFCIDQTKSNSGLFGL 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWICDT 309
++ A+L+ + + ++++ +++ + G + W+ +
Sbjct: 121 TVALAVLQGTGLVATARSGALFSQCPQANNIVPDDSIFTTLTMVVTMTAGTAVVMWLGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV 369
I++ G G G S+++ + I + L+ + Q G W ++ V ++ V
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPSALWSIKEQ--GDLAGGWIEFGIVIAVGLVMVALVVF 238
Query: 370 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 429
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 239 VEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLYIPALVV 293
Query: 430 SILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMG 488
GS W + +T+ A VY+ + FF F + I+ P+E+AD + K G
Sbjct: 294 QFSGSTAGWAAWIQKNLADTAAPAHITVYFFLIIFFAFFY--VAISFNPEEVADNMKKYG 351
Query: 489 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 548
IP ++ G+ T EYL+ + + G L L ++A T+ L N+ F G TS+L
Sbjct: 352 GFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAPLGA-NQNFPFGGTSIL 410
Query: 549 IIVGSIIELRRSYQA 563
IIVG +E + ++
Sbjct: 411 IIVGVGLETVKQIES 425
>sp|Q9Z7S5|SECY_CHLPN Protein translocase subunit SecY OS=Chlamydia pneumoniae GN=secY
PE=3 SV=1
Length = 457
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 217/460 (47%), Gaps = 52/460 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ R+G FIP+PG + L + + + +L D
Sbjct: 6 QFFLITELRQKLFYTFALLTACRVGVFIPVPGINGELAVAYFKQLLGSGQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+ +P+L + +E D G +I ++
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLFLVFMPALQREMRESSDQGKRRIGRLTRLFTVAL 125
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV-------------CGAMTMSWICDT 309
A++++++ A ++L ++ + ++ + V G + + WI +
Sbjct: 126 AVIQSLLFAKFALRMNLTIPGIVLPTLLSSKLFGVPWIFYITTVVVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQL-LG---SSVRWWPFMLGLLGVFTIVTM 365
IS+ G G G SLII +GIL+ + L ++++L LG SS +L L VF V +
Sbjct: 186 ISDKGIGNGISLIIALGILSSFPSVLGSIVNKLNLGSQDSSDLGLISILILALVFVFVLI 245
Query: 366 WAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTYLL 422
+++ EG RK+ +QY AR EV Y+P +N +G+ PV+ + LL
Sbjct: 246 TTILIIEGVRKIPVQY--------ARRVIGRREVPGGGSYLPLKVNYAGVIPVIFASSLL 297
Query: 423 AFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PK 478
FP+ + + S + + + +L P + VY Y + F F A P+
Sbjct: 298 MFPATIGQFIASESSWMKRIAALLAPGS------LVYSICYVLLIIFFTYFWTATQFHPE 351
Query: 479 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RIN 537
+IA + K A IP ++ GK T YL G L L+ +A ++L LR N
Sbjct: 352 QIASEMKKNNAFIPGIRQGKPTQHYLEYTMNRVTLLGALFLAAIAILPSLLGCLLRVDSN 411
Query: 538 EGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRY 577
+ +G T++LI+VG +++ + A+ +M RRY
Sbjct: 412 VSYFLGGTAMLIVVGVVLDTMKQVDAFLLM-------RRY 444
>sp|P38375|SECY_BACHD Protein translocase subunit SecY OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=secY PE=3 SV=2
Length = 430
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 32/430 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS--GSVDELGDFGAELKLS 211
++RR++ T +++++ RIG FIP+PG +R ++ D++ + G ++ G GA S
Sbjct: 12 GDLRRKVIFTLLMLIVFRIGSFIPVPGTNREVL--DFVDQANAFGFLNTFGG-GALGNFS 68
Query: 212 FFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F +GI P I ASI+MQ+L +VP + KEG G K+ + + ++ ++A+ +
Sbjct: 69 IFAMGIMPYITASIVMQLLQMDVVPKFAEWAKEGEAGRRKLAQFTRYGTIVLGFIQALGM 128
Query: 271 AC-YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+ ++ + + SV + A +L G + W+ + I+ G G G S+II GI
Sbjct: 129 SVGFNNFFPGLIPNPSVSVYLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAA 188
Query: 330 GYTETL---YKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYYGFK 385
G L Y Q G + ++ LL + + + V+ V + RK+ +QY
Sbjct: 189 GIPNGLNLIYSTRIQDAGEQLFLNIVVILLLALAILAIIVGVIFVQQALRKIPVQY---- 244
Query: 386 LASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHVKEI 443
A +P+ ++P +N +G+ PV+ L FP +A + GS P V E
Sbjct: 245 -AKRLVGRNPVGGQSTHLPLKVNAAGVIPVIFALSLFIFPPTVAGLFGSDHPVAAWVIET 303
Query: 444 LNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEY 503
+ +G VY + F + + + P+ +A+ L K G IP ++PGKAT Y
Sbjct: 304 FDYTHPIGMA--VYALLIIGFTYFYTFIQVN--PERMAENLKKQGGYIPGIRPGKATQTY 359
Query: 504 LTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE------- 556
+T+I F G L L+++A + + + IG T +LI+VG ++
Sbjct: 360 ITRILYRLTFVGSLFLAVVAILPVFFIKF-ADLPQAIQIGGTGLLIVVGVALDTMKQIEA 418
Query: 557 --LRRSYQAY 564
++RSY+ +
Sbjct: 419 QLIKRSYKGF 428
>sp|Q9HWF5|SECY_PSEAE Protein translocase subunit SecY OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secY
PE=3 SV=1
Length = 442
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 28/423 (6%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAALFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGESGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ L A S+ V V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSV-GLGSQGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVA 192
Query: 330 GYTETLYKMLSQLLGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 388
G + + + + + +GLL V I + V + G R++ + Y A
Sbjct: 193 GLPRAIGQSFESARQGDINIFALIGVGLLAVAIIA--FVVFIERGQRRIAVHY-----AK 245
Query: 389 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQHVKEIL 444
+ ++P +N +G+ P + + +L FP+ L S G + Q V + +
Sbjct: 246 RQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAI 305
Query: 445 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYL 504
P + + ++ F + +F+ PK++A+ L K GA IP ++PG+ + Y+
Sbjct: 306 APGQPLNILLFTAGIVFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGEQSARYI 361
Query: 505 TKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIELRRSYQA 563
+ +G L + T+ +L +L + F +G TS+LI+V +++ Q+
Sbjct: 362 DGVLTRLTMFGALYM----TAVCLLPQFLVVAAHVPFYLGGTSLLIVVVVVMDFMAQVQS 417
Query: 564 YNV 566
+ V
Sbjct: 418 HLV 420
>sp|P46785|SECY_STRCO Protein translocase subunit SecY OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=secY PE=3 SV=2
Length = 437
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 206/439 (46%), Gaps = 32/439 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 308
+++ AIL+ + + ++++ ++ T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q G W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GELADGWIEFGTVILVGLVMVGLVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 429 A----SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYL 484
S G W I A P + + F F I+ P+E+AD +
Sbjct: 293 VQFSNSTAGWATW-----ITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPEEVADNM 347
Query: 485 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 544
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFGG 406
Query: 545 TSVLIIVGSIIELRRSYQA 563
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>sp|P49977|SECY_STRLI Protein translocase subunit SecY OS=Streptomyces lividans GN=secY
PE=3 SV=1
Length = 437
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 206/439 (46%), Gaps = 32/439 (7%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 1 MLTAFAPAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 308
+++ AIL+ + + ++++ ++ T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAV 368
I++ G G G S+++ + I + L+ + Q G W ++ V ++ V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--GELADGWIEFGTVILVGLVMVGLVV 237
Query: 369 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 428
V + R++ +QY + + + YIP +N +G+ PV+ + LL P+++
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLLYIPALI 292
Query: 429 A----SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYL 484
S G W I A P + + F F I+ P+E+AD +
Sbjct: 293 VQFSNSTAGWATW-----ITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPEEVADNM 347
Query: 485 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGF 544
K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F G
Sbjct: 348 KKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQNFPFGG 406
Query: 545 TSVLIIVGSIIELRRSYQA 563
TS+LIIVG +E + ++
Sbjct: 407 TSILIIVGVGLETVKQIES 425
>sp|P93690|SECY_SPIOL Preprotein translocase subunit SECY, chloroplastic OS=Spinacia
oleracea GN=SECY PE=2 SV=1
Length = 545
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 216/463 (46%), Gaps = 49/463 (10%)
Query: 120 NETFRSKPKMYKNRFLNFIRLSSVLNNAA---ESFFKSEIRRRLFVTAVLIVISRIGYFI 176
++TF S K+R + +++ + +++ FFK + + L+ +SR+G ++
Sbjct: 96 SQTFESSSGTRKDRSSSARGVAAAIEDSSIDFGDFFKGPLPGKFLTLLGLLALSRLGIYV 155
Query: 177 PLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIV 234
PL G +R D SF+S ++D G +L LGI P I A I+ Q+L +
Sbjct: 156 PLGGVNREAFVGNLDQNSFIS-TLDSFSG-GGIGRLGICSLGIVPFINAQIVFQLLSQVY 213
Query: 235 PSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTA 293
P L L +KEG G +KIK Y + S+GFA+++A+ + PY +S + V+ +
Sbjct: 214 PKLQDLQKKEGEAGRKKIKQYTQYASVGFALVQAIGQVLFLRPY---VNDYSTEWVLSSV 270
Query: 294 FLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT------------GYTETLYKMLSQ 341
LL G++ +++ + IS+ G G+SL+I I++ Y E Y L+
Sbjct: 271 ILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTVAEAYQEGNYTGLAI 330
Query: 342 LLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEP 401
++ S V VF IV V E RK+ + Y AS S +
Sbjct: 331 IVVSFVSL---------VFGIV-----YVQEAERKIPMNY-----ASRYSGKSGGLQKSA 371
Query: 402 YIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIY 461
Y+PF +N +G+ P++ +T L+ P+ LA G + L P S + +
Sbjct: 372 YLPFKVNSAGVMPIIFSTSSLSLPATLARFTGLDILKKAAVALTPGGSFYLPTNIL--LI 429
Query: 462 AFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSI 521
AFF + + + P ++++ L + GA IP V+PGK+T Y+ + + G L+I
Sbjct: 430 AFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSGFLAI 487
Query: 522 LATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 563
LA +++ GF+ TSVLI+VG + R QA
Sbjct: 488 LAAGPAVVEQATHLTAFRGFA--GTSVLILVGCATDTARKVQA 528
>sp|O25879|SECY_HELPY Protein translocase subunit SecY OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secY PE=3 SV=1
Length = 420
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 210/424 (49%), Gaps = 33/424 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 207
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYLTILITLIQA 117
Query: 268 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVG--LRSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQ 380
II GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 176 IIFAGIVSGIPSAISGTFN-LVNTGVINILMLIGIV-LIVLATIFAIIYVELAERRIPIS 233
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASILGSPFWQH 439
Y A + + YIP +N SG+ P + + LL FPS IL + Q
Sbjct: 234 Y-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQA 288
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 499
V + L+P+ A + + + FF + ++ I K+IAD L + G IP ++PG+
Sbjct: 289 VADFLSPQGY--AYNILMFLLIIFFAYFYS--SIVFNSKDIADNLRRNGGYIPGLRPGEG 344
Query: 500 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 559
T +L + + WG L L++++T IL ++ + F G T+VLI+V I+ +
Sbjct: 345 TSSFLNSVASKLTLWGSLYLALISTVPWIL---VKAMGVPFYFGGTAVLIVVQVAIDTMK 401
Query: 560 SYQA 563
+A
Sbjct: 402 KIEA 405
>sp|P0A5Z2|SECY_MYCTU Protein translocase subunit SecY OS=Mycobacterium tuberculosis
GN=secY PE=3 SV=1
Length = 441
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 204/450 (45%), Gaps = 63/450 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 205
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 266 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I VGI +L R + I+ + V V +G R++
Sbjct: 190 MSLLIFVGIAARIPAEGQSILES------RGGVVFTAVCAAALIIIVGVVFVEQGQRRIP 243
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-------ASI 431
+QY A Y+P +N +G+ PV+ + L+ P ++ + +
Sbjct: 244 VQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGV 298
Query: 432 LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 488
+G+ +W + V L+ +++ VY IY + F F I P E AD + K G
Sbjct: 299 VGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFG 353
Query: 489 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI-----G 543
IP ++PG+ T +YL + + G + L ++A +L + +I G ++ G
Sbjct: 354 GFIPGIRPGRPTADYLRYVLSRITLPGSIYLGVIA----VLPNLFLQIGAGGTVQNLPFG 409
Query: 544 FTSVLIIVGSIIE---------LRRSYQAY 564
T+VLI++G ++ ++R+Y+ +
Sbjct: 410 GTAVLIMIGVGLDTVKQIESQLMQRNYEGF 439
>sp|P0A5Z3|SECY_MYCBO Protein translocase subunit SecY OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=secY PE=3 SV=1
Length = 441
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 204/450 (45%), Gaps = 63/450 (14%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 205
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 266 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 319 SSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
SL+I VGI +L R + I+ + V V +G R++
Sbjct: 190 MSLLIFVGIAARIPAEGQSILES------RGGVVFTAVCAAALIIIVGVVFVEQGQRRIP 243
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL-------ASI 431
+QY A Y+P +N +G+ PV+ + L+ P ++ + +
Sbjct: 244 VQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGV 298
Query: 432 LGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMG 488
+G+ +W + V L+ +++ VY IY + F F I P E AD + K G
Sbjct: 299 VGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFG 353
Query: 489 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI-----G 543
IP ++PG+ T +YL + + G + L ++A +L + +I G ++ G
Sbjct: 354 GFIPGIRPGRPTADYLRYVLSRITLPGSIYLGVIA----VLPNLFLQIGAGGTVQNLPFG 409
Query: 544 FTSVLIIVGSIIE---------LRRSYQAY 564
T+VLI++G ++ ++R+Y+ +
Sbjct: 410 GTAVLIMIGVGLDTVKQIESQLMQRNYEGF 439
>sp|P27148|SECY_LACLC Protein translocase subunit SecY OS=Lactococcus lactis subsp.
cremoris GN=secY PE=3 SV=3
Length = 439
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 208/436 (47%), Gaps = 41/436 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+F ++R R+ T ++ + R+G I PG + + + Q ++ VSG+
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L
Sbjct: 64 ----AMQNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITL 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A+ +++ I A + S+ + + + ++ LL G+M ++W+ + I+E GFG G
Sbjct: 120 VLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTGSMVVTWMGEQINEKGFGSG 179
Query: 319 SSLIICVGILTG--------YTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV 370
S+II GI++G Y E + + S W F++GL+ ++ V
Sbjct: 180 VSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMS---WIFVIGLILSAIVIIYVTTFV 236
Query: 371 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS 430
+ RKV +QY KL A S Y+P +NP+G+ PV+ + P+ +
Sbjct: 237 QQAERKVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQ 287
Query: 431 ILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMG 488
L +V + + ++ W YA + LF F + P+++A+ L K G
Sbjct: 288 FLQRSQGSNVGWLSTLQNALSYTTWTGMLFYALLIVLFTFFYSFVQVNPEKMAENLQKQG 347
Query: 489 ARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVL 548
+ IP+V+PGK T +Y++++ G L L +++ I + + + ++G TS+L
Sbjct: 348 SYIPSVRPGKGTEKYVSRLLMRLATVGSLFLGLISIIP-IAAQNVWGLPKIVALGGTSLL 406
Query: 549 IIVGSIIELRRSYQAY 564
I++ I+ + + Y
Sbjct: 407 ILIQVAIQAVKQLEGY 422
>sp|Q9ZJS9|SECY_HELPJ Protein translocase subunit SecY OS=Helicobacter pylori (strain
J99) GN=secY PE=3 SV=1
Length = 420
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 210/424 (49%), Gaps = 33/424 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 207
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYLTILITLIQA 117
Query: 268 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVGL--RSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 322 IICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTE-GCRKVKLQ 380
II GI++G + + L+ + V ++G++ + + T++A++ E R++ +
Sbjct: 176 IIFAGIVSGIPSAISGTFN-LVNTGVINILMLIGIV-LIVLATIFAIIYVELAERRIPIS 233
Query: 381 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASILGSPFWQH 439
Y A + + YIP +N SG+ P + + LL FPS IL + Q
Sbjct: 234 Y-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQA 288
Query: 440 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 499
+ + L+P+ A + + + FF + ++ I K+IAD L + G IP ++PG+
Sbjct: 289 IADFLSPQGY--AYNILMFLLIIFFAYFYS--SIVFNSKDIADNLRRNGGYIPGLRPGEG 344
Query: 500 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRR 559
T +L + + WG L L++++T IL ++ + F G T+VLI+V I+ +
Sbjct: 345 TSSFLNAVASKLTLWGSLYLALISTVPWIL---VKAMGVPFYFGGTAVLIVVQVAIDTMK 401
Query: 560 SYQA 563
+A
Sbjct: 402 KIEA 405
>sp|P49461|SECY_ODOSI Protein translocase subunit SecY OS=Odontella sinensis GN=secY PE=3
SV=1
Length = 425
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 201/407 (49%), Gaps = 32/407 (7%)
Query: 171 RIGYFIPLPGFDR---RLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILM 227
R+G F+P+PG D + + + GD + + F L I P I ASI+M
Sbjct: 25 RMGTFLPVPGIDHGHLEFYIERHFRLRTLVSTFAGD--NTVVVGLFTLNIFPYINASIIM 82
Query: 228 QVLCHIVPSLVQLRKEG-LDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSV 286
Q+L ++P L +L+KEG + I S ++LG++++++ VA Y L +++ + +
Sbjct: 83 QLLVSLLPGLSKLQKEGGAEARRSINSLTRLLTLGWSLIQSTSVAFY-LKRALFEWNLVL 141
Query: 287 KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSS 346
+V L GAM + W+ + I+E G G G SL+I I++ +L + Q++ S
Sbjct: 142 AFEIV--IWLTTGAMIVLWLSEIITEYGLGNGPSLLIYTNIVS----SLPGFVKQVITES 195
Query: 347 VRWWPFMLGLLGVFTI-VTMWAVVV-TEGCRKVKL-QYYGFKLASAAREDSPITEVEPYI 403
P LL F + V ++ +V+ EG RKV L S S E YI
Sbjct: 196 SGKVPIGSWLLSGFVLFVALYGIVLLQEGMRKVYLISSKQLNQTSLPFSGSSNLESGYYI 255
Query: 404 PFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS----VGARPWVYYT 459
P N +G+ P++ TT +L P+ + ++ + IL P + V + +Y+
Sbjct: 256 PLRFNQAGVMPIILTTAVLVIPTFIYNL-------GLLRILTPLITLPVFVKSYKIIYWV 308
Query: 460 IYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGL 517
Y + LF++F I PK+++D L KM IP ++PG T YL ++ G +
Sbjct: 309 SYFVLILLFSLFYSTIVVNPKDLSDELQKMAVSIPGIRPGVETTFYLKQVMKRVTLLGAI 368
Query: 518 LLSILATSSTILDHYLRRINEGFS-IGFTSVLIIVGSIIELRRSYQA 563
+L++LAT I+ L GF+ +G TS+LI+VG I++L R ++
Sbjct: 369 MLALLATLPNIIQAILSL--SGFTNLGTTSLLILVGVILDLTREMRS 413
>sp|P16336|SECY_BACSU Protein translocase subunit SecY OS=Bacillus subtilis (strain 168)
GN=secY PE=3 SV=1
Length = 431
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 205/433 (47%), Gaps = 38/433 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRR-LIPQDYLSFVSGSVDELGDFG--AELKL 210
S+IR ++ T +++++ RIG FIP+P + L Q + G D L FG A +
Sbjct: 12 SDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQM----GVFDLLNTFGGGALYQF 67
Query: 211 SFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEA 267
S F +GI+P I ASI++Q+L +VP + K+G G K+ + + I LGF
Sbjct: 68 SIFAMGITPYITASIIIQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALG 127
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ +L + V ++ A +L G + W+ + I+ G G G S+II GI
Sbjct: 128 MSYGFNNLANGMLIEKSGVSTYLIIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGI 187
Query: 328 LTGYTETLYKML-SQLLGSSVRWWPFMLGLLGVFTIVTMWAVVV-----TEGCRKVKLQY 381
++ +T+ ++ +Q +GS+ + + ++ + ++ + AV+V + RK+ +QY
Sbjct: 188 VSSIPKTIGQIYETQFVGSNDQLFIHIVKV--ALLVIAILAVIVGVIFIQQAVRKIAIQY 245
Query: 382 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-PFWQHV 440
A ++P +NP+G+ PV+ L P +AS G+ + +
Sbjct: 246 -----AKGTGRSPAGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGTNDVTKWI 300
Query: 441 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 500
+ + VG +Y + F + + + P+++AD L K G IP V+PGK T
Sbjct: 301 QNNFDNTHPVGMA--IYVALIIAFTYFYAFVQVN--PEQMADNLKKQGGYIPGVRPGKMT 356
Query: 501 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE---- 556
+ +T I F G + L++++ + + + IG TS+LI+VG +E
Sbjct: 357 QDRITSILYRLTFVGSIFLAVISILPIFFIQF-AGLPQSAQIGGTSLLIVVGVALETMKQ 415
Query: 557 -----LRRSYQAY 564
++R+Y+ +
Sbjct: 416 LESQLVKRNYRGF 428
>sp|P58118|SECY_LACLA Protein translocase subunit SecY OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=secY PE=3 SV=1
Length = 439
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 210/428 (49%), Gaps = 25/428 (5%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAE 207
E+F ++R R+ T ++ + R+G I +PG + + L L F++ + L A
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITVPGVNVQNLTEVSNLPFLN--MMNLVSGNAM 65
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L A+ +
Sbjct: 66 QNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQ 125
Query: 267 AV-IVACYSLPYSIYAASHS--VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++ I A + S+ + ++M+ A +L G+M ++W+ + I+E GFG G S+II
Sbjct: 126 SIGITAGFQAMSSLNIVQNPNWQSYLMIGA-ILTTGSMVVTWMGEQINEKGFGSGVSVII 184
Query: 324 CVGILTGY---TETLY--KMLSQLLGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVK 378
GI++ +++Y K L+ W F++GL+ I+ V + RKV
Sbjct: 185 FAGIVSSIPSAVKSVYDEKFLNVRPSEIPMSWLFVIGLVLSAIIIIYVTTFVQQAERKVP 244
Query: 379 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQ 438
+QY KL A S Y+P +NP+G+ PV+ + P+ + L
Sbjct: 245 IQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQFLQRSQGS 295
Query: 439 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPNVKP 496
+V + + ++ W YA + LF F + P+++A+ L K G+ IP+V+P
Sbjct: 296 NVGWLSTLQDALSYTTWTGMLFYALLIVLFTFFYSFVQVNPEKMAENLQKQGSYIPSVRP 355
Query: 497 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 556
GK T +Y++++ G L L +++ I + + + ++G TS+LI++ I+
Sbjct: 356 GKGTEKYVSRLLMRLATVGALFLGLISIIP-IAAQNVWGLPKIVALGGTSLLILIQVAIQ 414
Query: 557 LRRSYQAY 564
+ + Y
Sbjct: 415 AVKQLEGY 422
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,635,991
Number of Sequences: 539616
Number of extensions: 8198901
Number of successful extensions: 25185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 24658
Number of HSP's gapped (non-prelim): 133
length of query: 579
length of database: 191,569,459
effective HSP length: 123
effective length of query: 456
effective length of database: 125,196,691
effective search space: 57089691096
effective search space used: 57089691096
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)