Query 008063
Match_columns 579
No_of_seqs 129 out of 1624
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 17:14:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icj_A Uncharacterized metal-d 100.0 2.2E-65 7.5E-70 550.4 35.7 467 46-560 37-506 (534)
2 3gnh_A L-lysine, L-arginine ca 100.0 3.1E-39 1E-43 338.7 33.1 365 46-579 3-402 (403)
3 3feq_A Putative amidohydrolase 100.0 7.6E-39 2.6E-43 337.9 28.7 354 44-579 3-410 (423)
4 2r8c_A Putative amidohydrolase 100.0 1.4E-38 4.7E-43 336.3 29.4 362 44-579 3-413 (426)
5 3h4u_A Amidohydrolase; signatu 100.0 3.9E-38 1.3E-42 338.1 32.5 388 38-578 22-450 (479)
6 3ls9_A Triazine hydrolase; atr 100.0 3E-38 1E-42 336.6 28.7 390 47-578 2-431 (456)
7 4dzh_A Amidohydrolase; adenosi 100.0 3.3E-38 1.1E-42 337.7 25.9 381 43-578 12-421 (472)
8 3lnp_A Amidohydrolase family p 100.0 1.6E-37 5.6E-42 332.2 30.5 381 41-578 19-439 (468)
9 4dyk_A Amidohydrolase; adenosi 100.0 7.3E-38 2.5E-42 333.3 27.0 378 43-578 6-414 (451)
10 4f0r_A 5-methylthioadenosine/S 100.0 1.4E-37 4.8E-42 330.7 28.0 380 43-578 4-412 (447)
11 4aql_A Guanine deaminase; hydr 100.0 1.3E-35 4.3E-40 317.4 33.1 203 363-579 240-471 (476)
12 2qs8_A XAA-Pro dipeptidase; am 100.0 1.3E-35 4.3E-40 312.8 32.1 362 43-578 5-411 (418)
13 2paj_A Putative cytosine/guani 100.0 9.4E-36 3.2E-40 320.6 29.4 391 43-578 8-454 (492)
14 2p9b_A Possible prolidase; pro 100.0 5.3E-35 1.8E-39 311.8 33.1 382 43-579 11-432 (458)
15 2puz_A Imidazolonepropionase; 100.0 5.6E-35 1.9E-39 308.0 32.1 387 44-579 14-419 (419)
16 3be7_A Zn-dependent arginine c 100.0 1.4E-34 4.8E-39 303.8 33.9 360 44-578 5-399 (408)
17 2bb0_A Imidazolonepropionase; 100.0 6.7E-35 2.3E-39 307.6 29.7 183 363-578 227-413 (421)
18 2q09_A Imidazolonepropionase; 100.0 1.6E-34 5.4E-39 304.2 31.4 384 45-579 5-407 (416)
19 2qt3_A N-isopropylammelide iso 100.0 1.9E-34 6.6E-39 302.2 31.0 372 44-578 4-396 (403)
20 2ood_A BLR3880 protein; PSI-II 100.0 1.4E-34 4.8E-39 309.7 27.9 204 362-578 210-464 (475)
21 2i9u_A Cytosine/guanine deamin 100.0 8.8E-34 3E-38 300.7 31.7 383 43-579 7-428 (439)
22 1ra0_A Cytosine deaminase; alp 100.0 4.9E-35 1.7E-39 309.5 19.6 386 44-578 7-409 (430)
23 4f0l_A Amidohydrolase; ssgcid, 100.0 7.9E-34 2.7E-38 302.7 27.3 197 363-578 221-434 (458)
24 3hpa_A Amidohydrolase; signatu 100.0 7.7E-33 2.6E-37 295.7 32.9 388 41-578 25-450 (479)
25 3v7p_A Amidohydrolase family p 100.0 1.2E-33 4.1E-38 298.1 25.3 366 47-579 2-404 (427)
26 3mdu_A N-formimino-L-glutamate 100.0 8.5E-33 2.9E-37 294.1 25.8 200 363-579 211-430 (453)
27 4ac7_C Urease subunit alpha; h 100.0 3.4E-33 1.2E-37 297.1 21.4 351 41-578 63-458 (570)
28 4ubp_C Protein (urease (chain 100.0 3.4E-33 1.2E-37 297.1 20.3 351 41-578 63-458 (570)
29 1p1m_A Hypothetical protein TM 100.0 3.4E-33 1.2E-37 293.1 19.2 354 47-578 1-380 (406)
30 3ooq_A Amidohydrolase; structu 100.0 1.5E-32 5E-37 287.3 22.5 177 368-578 209-386 (396)
31 3sfw_A Dihydropyrimidinase; hy 100.0 1.4E-31 4.9E-36 285.2 27.0 363 45-578 1-438 (461)
32 1gkr_A Hydantoinase, non-ATP d 100.0 9.1E-32 3.1E-36 286.7 24.7 361 45-578 2-434 (458)
33 1e9y_B Urease subunit beta; hy 100.0 1E-31 3.5E-36 290.3 23.5 198 363-578 226-457 (569)
34 3hm7_A Allantoinase; metallo-d 100.0 6.7E-31 2.3E-35 279.2 28.7 366 44-578 5-437 (448)
35 1xrt_A Dihydroorotase, dhoase; 100.0 1.3E-32 4.4E-37 293.9 15.6 368 41-578 43-465 (467)
36 3mtw_A L-arginine carboxypepti 100.0 2.9E-30 9.7E-35 266.2 31.7 189 361-577 202-400 (403)
37 3e74_A Allantoinase; (beta/alp 100.0 2.1E-30 7.3E-35 276.2 31.0 363 45-579 23-454 (473)
38 2imr_A Hypothetical protein DR 100.0 1.3E-31 4.3E-36 282.4 20.9 168 363-555 218-418 (420)
39 2z00_A Dihydroorotase; zinc bi 100.0 3.4E-31 1.2E-35 279.6 24.2 205 363-578 152-422 (426)
40 2vun_A Enamidase; nicotinate d 100.0 4.5E-30 1.5E-34 267.4 27.4 176 363-579 171-371 (386)
41 3dc8_A Dihydropyrimidinase; TI 100.0 3.7E-30 1.3E-34 275.1 26.4 357 45-578 1-435 (490)
42 2fty_A Dihydropyrimidinase; al 100.0 2.6E-30 9E-35 280.5 25.0 208 363-578 176-502 (559)
43 1gkp_A Hydantoinase; hydrolase 100.0 1E-29 3.4E-34 271.0 27.5 208 363-578 160-436 (458)
44 3gri_A Dihydroorotase, dhoase; 100.0 7.5E-30 2.6E-34 268.9 24.4 350 47-579 2-421 (424)
45 1yrr_A N-acetylglucosamine-6-p 100.0 1.2E-30 4E-35 271.5 17.7 181 367-578 176-380 (382)
46 3mpg_A Dihydroorotase, dhoase; 100.0 5.9E-30 2E-34 270.3 22.0 351 45-578 1-421 (428)
47 2gwn_A Dihydroorotase; zinc-bi 100.0 1.8E-29 6.3E-34 268.2 24.3 156 411-578 236-433 (452)
48 2ogj_A Dihydroorotase; TIM bar 100.0 6.2E-30 2.1E-34 269.2 19.6 176 363-579 186-389 (417)
49 1nfg_A D-hydantoinase; TIM bar 100.0 3.6E-29 1.2E-33 266.6 25.0 202 363-578 159-435 (457)
50 2vm8_A Dihydropyrimidinase-rel 100.0 6.1E-29 2.1E-33 267.9 26.1 214 363-578 187-465 (501)
51 3mkv_A Putative amidohydrolase 100.0 8E-29 2.7E-33 256.6 24.4 191 362-578 211-412 (426)
52 2ics_A Adenine deaminase; TIM 100.0 7.8E-29 2.7E-33 257.3 22.9 177 363-579 165-371 (379)
53 3nqb_A Adenine deaminase 2; PS 100.0 2.2E-27 7.6E-32 258.9 25.2 322 42-578 32-372 (608)
54 4gy7_A Urease; JACK bean, hydr 100.0 1E-27 3.5E-32 267.3 22.3 107 464-578 616-728 (840)
55 1rk6_A D-aminoacylase; TIM bar 100.0 2E-27 6.8E-32 255.6 22.4 70 40-114 16-85 (496)
56 2ftw_A Dihydropyrimidine amido 100.0 3.4E-27 1.2E-31 255.0 23.3 214 363-578 169-447 (521)
57 3gip_A N-acyl-D-glutamate deac 100.0 5.1E-27 1.8E-31 251.0 23.5 204 363-579 196-464 (480)
58 2vr2_A Dihydropyrimidinase; hy 99.9 3.3E-26 1.1E-30 248.3 27.7 214 363-578 192-470 (541)
59 2vhl_A N-acetylglucosamine-6-p 99.9 3.6E-27 1.2E-31 246.3 18.9 177 370-578 186-388 (396)
60 3iv8_A N-acetylglucosamine-6-p 99.9 3.5E-25 1.2E-29 226.3 25.3 71 487-579 311-381 (381)
61 4ep8_C Urease subunit alpha; a 99.9 1.7E-26 6E-31 252.1 12.0 108 463-578 341-454 (566)
62 1onw_A Isoaspartyl dipeptidase 99.9 4.1E-24 1.4E-28 222.7 26.9 172 363-578 173-376 (390)
63 1o12_A N-acetylglucosamine-6-p 99.9 2.4E-22 8.3E-27 207.9 13.1 69 487-578 305-373 (376)
64 3pnu_A Dihydroorotase; TIM bar 99.7 7.5E-16 2.6E-20 156.4 20.6 252 255-557 48-332 (359)
65 3ggm_A Uncharacterized protein 99.6 5.7E-15 2E-19 116.4 8.6 73 44-117 3-75 (81)
66 2z26_A Dihydroorotase, dhoase; 99.5 2.8E-13 9.7E-18 137.9 17.9 161 363-540 117-312 (347)
67 2pgf_A Adenosine deaminase; me 99.1 6.5E-10 2.2E-14 113.7 14.1 236 240-535 108-360 (371)
68 3rys_A Adenosine deaminase 1; 98.9 1.1E-08 3.6E-13 102.9 15.1 240 241-535 75-322 (343)
69 3iar_A Adenosine deaminase; pu 98.9 1.7E-08 5.9E-13 102.1 16.0 140 366-535 192-334 (367)
70 3pao_A Adenosine deaminase; st 98.9 2.7E-09 9.4E-14 106.5 9.2 239 241-534 72-318 (326)
71 2ob3_A Parathion hydrolase; me 98.6 1.7E-06 5.8E-11 86.9 18.6 151 366-532 148-325 (330)
72 1zzm_A Putative deoxyribonucle 98.5 3.1E-06 1.1E-10 82.0 17.5 135 365-534 113-259 (259)
73 1yix_A Deoxyribonuclease YCFH; 98.4 3.7E-06 1.3E-10 81.7 15.3 137 365-535 110-258 (265)
74 1xwy_A DNAse TATD, deoxyribonu 98.4 3.5E-06 1.2E-10 81.9 14.8 135 366-534 112-263 (264)
75 2vc7_A Aryldialkylphosphatase; 98.4 1.3E-05 4.3E-10 80.0 19.1 143 366-532 151-314 (314)
76 1bf6_A Phosphotriesterase homo 98.4 1.3E-05 4.4E-10 78.9 18.0 141 366-532 138-291 (291)
77 3rcm_A TATD family hydrolase; 98.3 1E-05 3.5E-10 79.2 14.3 138 365-535 113-266 (287)
78 2y1h_A Putative deoxyribonucle 98.3 3.6E-05 1.2E-09 75.0 18.1 133 365-535 125-267 (272)
79 2gzx_A Putative TATD related D 98.1 0.00013 4.5E-09 70.5 18.7 138 364-535 107-257 (265)
80 4gxw_A Adenosine deaminase; am 98.1 3E-05 1E-09 78.8 14.5 244 240-534 89-342 (380)
81 3ovg_A Amidohydrolase; structu 98.1 0.00028 9.5E-09 71.2 20.8 160 365-549 168-345 (363)
82 2a3l_A AMP deaminase, AMPD; at 98.0 2.4E-06 8.2E-11 92.5 4.6 131 371-535 503-643 (701)
83 4i6k_A Amidohydrolase family p 98.0 0.00026 9E-09 69.7 19.0 144 364-535 135-293 (294)
84 1j6o_A TATD-related deoxyribon 98.0 8.2E-05 2.8E-09 72.3 14.0 137 364-534 118-266 (268)
85 2xio_A Putative deoxyribonucle 97.9 0.00073 2.5E-08 66.7 18.6 137 366-539 127-297 (301)
86 3tn4_A Phosphotriesterase; lac 97.8 0.0014 4.8E-08 65.9 19.9 147 365-531 192-358 (360)
87 3pnz_A Phosphotriesterase fami 97.8 0.0016 5.3E-08 64.9 19.9 148 365-534 167-329 (330)
88 3k2g_A Resiniferatoxin-binding 97.8 0.00065 2.2E-08 68.7 17.0 150 365-535 189-356 (364)
89 3lgd_A Adenosine deaminase CEC 97.7 0.00028 9.5E-09 74.0 13.1 142 365-534 308-460 (508)
90 3gtx_A Organophosphorus hydrol 97.7 0.0027 9.3E-08 63.5 19.4 143 365-532 172-339 (339)
91 3ipw_A Hydrolase TATD family p 97.5 0.0007 2.4E-08 67.0 12.1 133 366-534 154-323 (325)
92 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.3 0.0038 1.3E-07 61.5 14.8 146 363-538 135-297 (303)
93 3guw_A Uncharacterized protein 97.3 0.00088 3E-08 64.4 9.4 133 366-535 110-250 (261)
94 2dvt_A Thermophilic reversible 97.3 0.0026 8.8E-08 63.4 13.2 54 466-534 270-325 (327)
95 3rhg_A Putative phophotriester 97.2 0.0015 5E-08 66.1 10.1 153 365-536 178-347 (365)
96 3gg7_A Uncharacterized metallo 96.2 0.028 9.7E-07 53.5 10.8 133 366-535 104-246 (254)
97 2ffi_A 2-pyrone-4,6-dicarboxyl 95.5 0.047 1.6E-06 53.0 9.6 144 365-535 123-281 (288)
98 3cjp_A Predicted amidohydrolas 95.1 0.11 3.6E-06 50.0 10.6 129 366-534 130-265 (272)
99 2wje_A CPS4B, tyrosine-protein 94.5 0.67 2.3E-05 43.7 14.2 90 422-532 150-243 (247)
100 3irs_A Uncharacterized protein 93.5 0.24 8.1E-06 48.2 9.0 139 364-538 136-285 (291)
101 3qy7_A Tyrosine-protein phosph 92.5 3.4 0.00012 39.2 15.3 87 423-534 147-235 (262)
102 2f6k_A Metal-dependent hydrola 92.3 0.32 1.1E-05 47.3 8.1 135 366-533 135-307 (307)
103 4do7_A Amidohydrolase 2; enzym 90.4 2.6 9E-05 40.8 12.5 151 365-535 121-290 (303)
104 3ij6_A Uncharacterized metal-d 88.1 3.9 0.00013 39.9 11.7 136 365-533 141-305 (312)
105 1v77_A PH1877P, hypothetical p 87.7 3.8 0.00013 37.5 10.7 102 412-533 97-209 (212)
106 3nur_A Amidohydrolase; TIM bar 87.2 3.5 0.00012 41.1 10.9 49 472-535 306-355 (357)
107 3e2v_A 3'-5'-exonuclease; stru 85.4 3.6 0.00012 41.4 9.9 74 366-441 179-279 (401)
108 4inf_A Metal-dependent hydrola 83.3 5 0.00017 40.2 10.0 46 473-533 327-373 (373)
109 2hbv_A 2-amino-3-carboxymucona 81.8 11 0.00036 37.0 11.6 25 363-387 155-179 (334)
110 2gwg_A 4-oxalomesaconate hydra 79.1 11 0.00036 37.3 10.7 137 364-533 157-332 (350)
111 2i5g_A Amidohydrolase; NYSGXRC 78.6 8.1 0.00028 37.8 9.3 136 367-532 140-320 (325)
112 2wm1_A 2-amino-3-carboxymucona 77.7 7.8 0.00027 37.9 9.1 54 466-534 274-331 (336)
113 1itu_A Renal dipeptidase; glyc 70.6 8.2 0.00028 38.4 7.1 137 367-533 179-336 (369)
114 2qpx_A Predicted metal-depende 70.2 15 0.00053 36.6 9.2 143 368-534 211-371 (376)
115 2yxo_A Histidinol phosphatase; 65.7 54 0.0018 30.4 11.7 50 425-483 177-226 (267)
116 2rag_A Dipeptidase; aminohydro 62.8 15 0.00052 37.2 7.3 65 367-441 210-283 (417)
117 3id7_A Dipeptidase; streptomyc 54.5 31 0.0011 34.7 7.8 63 367-439 172-243 (400)
118 3b40_A PVDM, probable dipeptid 52.4 38 0.0013 34.2 8.2 63 367-439 194-265 (417)
119 3ly0_A Dipeptidase AC. metallo 52.1 26 0.0009 34.6 6.8 141 367-533 193-353 (364)
120 3neh_A Renal dipeptidase famil 43.1 65 0.0022 31.1 7.9 135 368-534 156-311 (318)
121 1nfg_A D-hydantoinase; TIM bar 37.2 13 0.00045 37.9 2.0 61 45-113 1-61 (457)
122 4e38_A Keto-hydroxyglutarate-a 24.7 2.3E+02 0.0077 25.9 7.9 75 363-444 43-117 (232)
123 3g8r_A Probable spore coat pol 22.8 2E+02 0.0067 28.2 7.4 70 363-442 75-144 (350)
124 3iix_A Biotin synthetase, puta 22.5 5E+02 0.017 24.6 12.3 109 363-478 84-196 (348)
125 4a29_A Engineered retro-aldol 22.0 2.8E+02 0.0097 25.7 7.9 36 363-398 137-172 (258)
126 4dpp_A DHDPS 2, dihydrodipicol 20.7 5.9E+02 0.02 24.8 12.5 45 246-292 79-123 (360)
No 1
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=100.00 E-value=2.2e-65 Score=550.43 Aligned_cols=467 Identities=30% Similarity=0.457 Sum_probs=413.1
Q ss_pred cEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhc-cCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 46 DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLA-ADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 46 ~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~-~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
.++|+|++|+++++......+|+|+||||++||+..+..... +++.++||++|++|+|||||+|+|+..++.....+++
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 489999999999776556779999999999999987764322 3567899999999999999999999998888888999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
.++.+.+++..+++++... ||+|.||.+..| ++.|++++||++ ++|+++.+.++|..++|+++|+.+|| ..
T Consensus 117 ~~~~s~~e~~~~l~~~~~~-----wi~g~G~~~~~~-~~~pt~~~LD~~--~~Pv~l~~~~~H~~~~Ns~AL~~~gi-~~ 187 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGR-----IIFGFGWDQDEL-GRWPTREDLDVI--DRPVFLYRRCFHVAVMNSKMIDLLNL-KP 187 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSS-----SEEEEEECHHHH-SSCCCHHHHTTS--SSCEEEEETTSSEEEECHHHHHHHCC-CC
T ss_pred CCCCCHHHHHHHHHHHHhh-----CEEEcccCHHHh-cCCCCHHHHhhC--CCeEEEEecCCcHhHHhHHHHHHcCC-CC
Confidence 9999999999999987653 999999999999 899999999999 99999999999999999999999999 87
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCC-C-CHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPE-V-SVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~ 282 (579)
+++|+ |. +|++.|.+...+...+|. . +.++.++.++.+.+.+.+.|+|++.+++. .+.
T Consensus 188 t~~p~---------G~-tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~----------~~~ 247 (534)
T 3icj_A 188 SKDFD---------ES-TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSV----------GEK 247 (534)
T ss_dssp CTTEE---------TT-TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEE----------CHH
T ss_pred CCCCC---------CC-CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCC----------CHH
Confidence 77765 78 999999998888888887 6 89999999999999999999999999852 146
Q ss_pred HHHHHHHHhhcCCCeeEEEEccCccchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcccC
Q 008063 283 FADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQV 362 (579)
Q Consensus 283 ~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~ 362 (579)
..+.++.+.+++.+++|++.+......+...+... .....++++.+++|++.||++++.++++.+||.+.++..|...
T Consensus 248 ~~~~~~~l~~~g~l~~rv~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~ 325 (534)
T 3icj_A 248 ALKALFELEREGRLKMNVFAYLSPELLDKLEELNL--GKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELV 325 (534)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEECGGGHHHHHHHTC--CSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCS
T ss_pred HHHHHHHHHhCCCCcEEEEEecCHHHHHHHHHhcc--ccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCccc
Confidence 67888899999999999997765543333332211 2345788999999999999999999999999999988889999
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccc
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 442 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~ 442 (579)
+++++++++++.|++.|+++.+|+.|+.+++..++++++.. .++.++|+.++++++++++++.|+.+++||.+
T Consensus 326 ~~~e~l~~~v~~A~~~G~~v~~Ha~gd~ai~~~l~a~~~~~-------~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~ 398 (534)
T 3icj_A 326 MNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAE-------FSGRIEHASLVRDDQLERIKELKVRISAQPHF 398 (534)
T ss_dssp SCHHHHHHHHHHHTTTTCEEEEEECSHHHHHHHHHHHHHHT-------CCCEEEECCBCCHHHHHHHHHHTCEEEECTTH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcChHHHHHHHHHHHhcc-------CCCEEEECCCCCHHHHHHHHHcCCeEEEcccc
Confidence 99999999999999999999999999999999999998764 58999999999999999999999999999998
Q ss_pred cccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHH
Q 008063 443 LLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIA 522 (579)
Q Consensus 443 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 522 (579)
...+. ++..+++++|. +..+|++.++++ +++++|||++..+.+++..++.++.| ..+....++|+++||++
T Consensus 399 ~~~~~-~~~~~lg~~r~-~~~~p~~~l~~~-v~valGSD~p~~~~~p~~~~~~av~r------~~~~~~~~ls~~eaL~~ 469 (534)
T 3icj_A 399 IVSDW-WIVNRVGEERA-KWAYRLKTLSSI-TKLGFSTDSPIEPADPWVSIDAAVNR------YVVDPGERVSREEALHL 469 (534)
T ss_dssp HHHCT-THHHHHHHHHG-GGBTCHHHHHHH-SCEEECCTTTTSCCCHHHHHHHHHHC------CSSCGGGCCCHHHHHHH
T ss_pred ccchh-HHHHhhCHHHH-hccHHHHHHHHh-CCEEeecCCCCCCCCHHHHHHHHHhc------cccCcccCCCHHHHHHH
Confidence 87655 66677888888 888999999999 99999999998889999999999987 23456778999999999
Q ss_pred HcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChh
Q 008063 523 HTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFA 560 (579)
Q Consensus 523 ~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~ 560 (579)
+|.|+|+.+|++ ++|+|+|||.|||||+|.||++++.
T Consensus 470 ~T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~~~~ 506 (534)
T 3icj_A 470 YTHGSAQVTLAE-DLGKLERGFRAEYIILDRDPLKEMK 506 (534)
T ss_dssp TTHHHHHHTTCT-TCSCCSTTSBCCEEEESSCTTC---
T ss_pred HHHHHHHHhCCC-CCeEECCCCCcCEEEECCChhhccc
Confidence 999999999999 8999999999999999999998654
No 2
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=3.1e-39 Score=338.66 Aligned_cols=365 Identities=18% Similarity=0.152 Sum_probs=253.9
Q ss_pred cEEEEcCeEEeCCCCCC-eeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 46 DLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 46 ~~likn~~v~~~~~~~~-~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
+++|+|++|+++++... .+++|+|+||||++|++..+ . .+++.++||++|++|+|||||+|+|+......
T Consensus 3 ~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~--~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~------ 73 (403)
T 3gnh_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGD-A--VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEV------ 73 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTS-C--CCTTCEEEEEEEEEEEECEEEEEECTTCCTTC------
T ss_pred cEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCC-C--CCCCCeEEECCCCEEcCCeEeeeEccccCccc------
Confidence 58999999999976543 67899999999999997653 1 13678999999999999999999998643210
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
.+++.
T Consensus 74 -------------------------------------------~~~~~-------------------------------- 78 (403)
T 3gnh_A 74 -------------------------------------------GGYNS-------------------------------- 78 (403)
T ss_dssp -------------------------------------------CSGGG--------------------------------
T ss_pred -------------------------------------------chhhh--------------------------------
Confidence 00000
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~ 284 (579)
...++++.........+.++++|+|++.+++... ....
T Consensus 79 ---------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~---------~~~~ 116 (403)
T 3gnh_A 79 ---------------------------------LEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAAD---------YDDV 116 (403)
T ss_dssp ---------------------------------GGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCST---------THHH
T ss_pred ---------------------------------hcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCCc---------cccH
Confidence 0112344455556677889999999999986421 1112
Q ss_pred HHHHHHhhcCCCeeEEEEccCc-------------------------cchhhHHHHHHhcCCCCCCceEEceEEEEEcCc
Q 008063 285 DVYQWASYSEKMKIRVCLFFPL-------------------------ETWSSLADLINKTGHVLSDWVYLGGVKAFADGS 339 (579)
Q Consensus 285 ~~~~~~~~~~~~~i~v~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~ 339 (579)
...+.+......+.++...... ...++..+..+...... ...+|++.+|.
T Consensus 117 ~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~G~ 191 (403)
T 3gnh_A 117 GLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKYG-----AQVIKICATGG 191 (403)
T ss_dssp HHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHTT-----CSEEEEECBCC
T ss_pred HHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCCcccCCHHHHHHHHHHHHHcC-----CCEEEEeecCC
Confidence 2333333333345565543221 11122222222211111 23578888876
Q ss_pred cCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeecc
Q 008063 340 LGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ 419 (579)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~ 419 (579)
+...... .+...++++.++++++.|+++|+++.+|+.++.+++..++. + ...+.|+.
T Consensus 192 ~~~~~~~-----------~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g----~~~i~H~~ 248 (403)
T 3gnh_A 192 VFSRGNE-----------PGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRA--------G----VDTIEHAS 248 (403)
T ss_dssp SSSSSCC-----------TTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT--------T----CSEEEECT
T ss_pred cCCCCCC-----------CccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------C----CCEEecCC
Confidence 5443322 23345789999999999999999999999988776655542 2 46899999
Q ss_pred CCChhhHHHHhhCCcEEEecccccccchhHHH------HhhChh--hhhhhhhhHHHHHHCCCeeeecCCCCCCCC-CHH
Q 008063 420 HLASGTAARFGDQGIVASMQPQHLLDDADSAR------KKLGVD--RAERESYLFQSLLANNALLALGSDWPVADI-NPL 490 (579)
Q Consensus 420 ~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~------~~l~~~--~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~-~~~ 490 (579)
++++++++++++.|+.++.+|........... ..+... .......+++.++++|+++++|||++..+. ..+
T Consensus 249 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~~~ 328 (403)
T 3gnh_A 249 LVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYPHGDNA 328 (403)
T ss_dssp TCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTCGG
T ss_pred cCCHHHHHHHHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCCchH
Confidence 99999999999999999988755322111110 001110 011234578999999999999999876553 334
Q ss_pred HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEE
Q 008063 491 CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEAT 570 (579)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v 570 (579)
.++..+.. .+++++++|+++|.|||++||+++++|+|++||.|||||+|.||++++..+. +|..|
T Consensus 329 ~e~~~~~~-------------~gl~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~~~~--~v~~v 393 (403)
T 3gnh_A 329 KQFAVMVR-------------YGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVTTLE--KPVFV 393 (403)
T ss_dssp GHHHHHHH-------------TTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGGGGG--SCSEE
T ss_pred HHHHHHHH-------------cCCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHHHhc--CcCEE
Confidence 45554432 3699999999999999999999998999999999999999999999877664 89999
Q ss_pred EECCEEeCC
Q 008063 571 YVSGVQAYP 579 (579)
Q Consensus 571 ~v~G~~v~~ 579 (579)
|++|++|+.
T Consensus 394 ~~~G~~v~~ 402 (403)
T 3gnh_A 394 MKGGAVVKA 402 (403)
T ss_dssp EETTEEEEC
T ss_pred EECCEEEeC
Confidence 999999874
No 3
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=7.6e-39 Score=337.86 Aligned_cols=354 Identities=19% Similarity=0.192 Sum_probs=246.8
Q ss_pred CccEEEEcCeEEeCCCCC-CeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccc
Q 008063 44 EADLVVTNGVIFTGDDSL-LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~~-~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~ 122 (579)
+++++|+|++|+|+++.. ...++|+|+||||++|++.... +++.++||++|++|+|||||+|+|+......
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~----~~~~~viD~~G~~v~PGlID~H~H~~~~~~~---- 74 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVD----LPNAQAIDVRGKTVMPGFIDCHVHVLASNAN---- 74 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSSC----
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCC----CCCCeEEeCCCCEECCCeeeeEeeecccCCC----
Confidence 457899999999997653 3567999999999999985221 3678999999999999999999998654320
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCC
Q 008063 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (579)
Q Consensus 123 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~ 202 (579)
....
T Consensus 75 --------------------------------------------~~~~-------------------------------- 78 (423)
T 3feq_A 75 --------------------------------------------LGVN-------------------------------- 78 (423)
T ss_dssp --------------------------------------------HHHH--------------------------------
T ss_pred --------------------------------------------hhhh--------------------------------
Confidence 0000
Q ss_pred CCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHH
Q 008063 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (579)
Q Consensus 203 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~ 282 (579)
...+.++.........+.++++|+|++.+++.. ..
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~~- 113 (423)
T 3feq_A 79 -----------------------------------ATQPNILAAIRSLPILDAMLSRGFTSVRDAGGA---------DW- 113 (423)
T ss_dssp -----------------------------------HHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSC---------CH-
T ss_pred -----------------------------------hcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCc---------hH-
Confidence 011223444455667888999999999998631 11
Q ss_pred HHHHHHHHhhcCCCeeEEEEccCc---------------------------------cchhhHHHHHHhcCCCCCCceEE
Q 008063 283 FADVYQWASYSEKMKIRVCLFFPL---------------------------------ETWSSLADLINKTGHVLSDWVYL 329 (579)
Q Consensus 283 ~~~~~~~~~~~~~~~i~v~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 329 (579)
.+.+.+......+.+++...+. ...++..+......... .
T Consensus 114 --~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g-----~ 186 (423)
T 3feq_A 114 --SLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKG-----A 186 (423)
T ss_dssp --HHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTT-----C
T ss_pred --HHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcC-----C
Confidence 2333344444445565542111 11122222222111111 2
Q ss_pred ceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCC
Q 008063 330 GGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKR 409 (579)
Q Consensus 330 ~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~ 409 (579)
..+|++.+|.+.... ++.+...++++.++++++.|++.|+++.+|+.++.+++..++. +
T Consensus 187 ~~ik~~~~g~~~~~~-----------~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l~~--------g-- 245 (423)
T 3feq_A 187 TQIKIMASGGVASPT-----------DPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIARAVRC--------G-- 245 (423)
T ss_dssp SSEEEECBCCSSSSS-----------CCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHH--------T--
T ss_pred CEEEEeccCCcCCCC-----------CCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHc--------C--
Confidence 357888777654321 1123455899999999999999999999999987776666553 2
Q ss_pred CCCceEeeccCCChhhHHHHhhCCcEEEe-----------------cccccccchhHHHHhhChhhhhhhhhhHHHHHHC
Q 008063 410 DQRFRIEHAQHLASGTAARFGDQGIVASM-----------------QPQHLLDDADSARKKLGVDRAERESYLFQSLLAN 472 (579)
Q Consensus 410 ~~~~~i~H~~~~~~~~~~~~~~~~i~~~~-----------------~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~ 472 (579)
...+.|+..+++++++++++.++.++. +|.++. .++..+. ....+++.++++
T Consensus 246 --~~~i~H~~~~~~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~-~~~~~~~~l~~~ 314 (423)
T 3feq_A 246 --VRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVA--------KVASVQQ-KGRESLEIYANA 314 (423)
T ss_dssp --CCEEEEEEECCHHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSS--------THHHHHH-HHHHHHHHHHHH
T ss_pred --CCEEeccCcCCHHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHH--------HHHHHHH-HHHHHHHHHHHC
Confidence 458999999999999999999998842 232222 1121222 456789999999
Q ss_pred CCeeeecCCCCCCC-CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEe
Q 008063 473 NALLALGSDWPVAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVIL 551 (579)
Q Consensus 473 Gi~v~~gsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvl 551 (579)
|+++++|||++..+ .+...+++... + .++++++|+++|.|||++||+++++|+|++||.|||||+
T Consensus 315 Gv~v~~gTD~~~~~~~~~~~e~~~~~-------------~-~ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~ 380 (423)
T 3feq_A 315 GVKMGFGSDLLGEMHAFQSGEFRIRA-------------E-VLGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVL 380 (423)
T ss_dssp TCCBCCCCCCCGGGGGGTTHHHHHHH-------------T-TSCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEE
T ss_pred CCEEEECCCCCCCCCcchHHHHHHHH-------------h-hCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEE
Confidence 99999999986433 22334443322 1 289999999999999999999998999999999999999
Q ss_pred CCCCCCChhhccC--CeEEEEEECCEEeCC
Q 008063 552 STSSWEDFAAEVS--ASIEATYVSGVQAYP 579 (579)
Q Consensus 552 d~~~~~~~~~~~~--~~v~~v~v~G~~v~~ 579 (579)
|.||++++..+.. .+|..||++|++||+
T Consensus 381 d~~p~~~~~~~~~~~~~v~~v~~~G~~v~~ 410 (423)
T 3feq_A 381 DGNPLEDIGVVADEGARVEYVLQRGTLVKR 410 (423)
T ss_dssp SSCTTTCGGGTSSSTTSEEEEEETTEEEEE
T ss_pred CCChhhCHHHHhccCCCceEEEECCEEEeC
Confidence 9999987765532 589999999999873
No 4
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=1.4e-38 Score=336.33 Aligned_cols=362 Identities=17% Similarity=0.179 Sum_probs=249.3
Q ss_pred CccEEEEcCeEEeCCCC-CCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccc
Q 008063 44 EADLVVTNGVIFTGDDS-LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~-~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~ 122 (579)
+++++|+|++|+++.+. ....++|+|+||||++|++.... +++.++||++|++|+|||||+|+|+.......
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~--- 75 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIK----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNL--- 75 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSSCH---
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCC----CCCCeEEECCCCEEcCCeEeeeeccccccCCc---
Confidence 45799999999999754 34567999999999999974221 36789999999999999999999986543200
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCC
Q 008063 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (579)
Q Consensus 123 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~ 202 (579)
...
T Consensus 76 ---------------------------------------------~~~-------------------------------- 78 (426)
T 2r8c_A 76 ---------------------------------------------PRV-------------------------------- 78 (426)
T ss_dssp ---------------------------------------------HHH--------------------------------
T ss_pred ---------------------------------------------hhh--------------------------------
Confidence 000
Q ss_pred CCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHH
Q 008063 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (579)
Q Consensus 203 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~ 282 (579)
...+.++.........+.++++|+|++.+++.. ..
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~~- 113 (426)
T 2r8c_A 79 -----------------------------------ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGA---------GY- 113 (426)
T ss_dssp -----------------------------------HHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSC---------CH-
T ss_pred -----------------------------------ccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCc---------hH-
Confidence 011224445556667888999999999998631 01
Q ss_pred HHHHHHHHhhcCCCeeEEEEccCc------------------------------------cchhhHHHHHHhcCCCCCCc
Q 008063 283 FADVYQWASYSEKMKIRVCLFFPL------------------------------------ETWSSLADLINKTGHVLSDW 326 (579)
Q Consensus 283 ~~~~~~~~~~~~~~~i~v~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~ 326 (579)
.+.+.+......+.++....+. ...++..+.........
T Consensus 114 --~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g--- 188 (426)
T 2r8c_A 114 --PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMG--- 188 (426)
T ss_dssp --HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHT---
T ss_pred --HHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcC---
Confidence 2333344434445566543211 11112222222111111
Q ss_pred eEEceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhc
Q 008063 327 VYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTT 406 (579)
Q Consensus 327 ~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~ 406 (579)
...+|++.+|.+.... ++++...++++.++++++.|++.|+++.+|+.+..+++..++.
T Consensus 189 --~~~ik~~~~G~~~~~~-----------~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~al~~-------- 247 (426)
T 2r8c_A 189 --ADQIKIMASGGVASPT-----------DPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVRC-------- 247 (426)
T ss_dssp --CSSEEEECBCCSSSSS-----------CCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHT--------
T ss_pred --CCEEEEEecCCCCCCC-----------CCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHc--------
Confidence 2357888887654321 1123455899999999999999999999999987766655542
Q ss_pred CCCCCCceEeeccCCChhhHHHHhhCCcEEEec-----ccccc----cchhHHHHhhChhhhhhhhhhHHHHHHCCCeee
Q 008063 407 GKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ-----PQHLL----DDADSARKKLGVDRAERESYLFQSLLANNALLA 477 (579)
Q Consensus 407 ~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~-----p~~~~----~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~ 477 (579)
+ ...+.|+..+++++++++++.++.++.+ |.... .........++..+. ....+++.++++|++++
T Consensus 248 G----~~~i~H~~~~~~~~~~~~~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~Gv~v~ 322 (426)
T 2r8c_A 248 G----VRTIEHGNLIDDETARLVAEHGAYVVPTLVTYDALASEGEKYGLPPESIAKIADVHG-AGLHSIEIMKRAGVKMG 322 (426)
T ss_dssp T----CSEEEECTTCCHHHHHHHHHTTCEEECCTHHHHHHHHHTTTTTCCHHHHTTSTTTGG-GHHHHHHHHHHTTCEEC
T ss_pred C----CCEEecCCcCCHHHHHHHHHcCCeEeechHHHHHHhhhccccCCCHHHHHHHHHHHH-HHHHHHHHHHHcCCeEE
Confidence 2 5689999999999999999999988432 11110 001122223333333 56778999999999999
Q ss_pred ecCCCCCCC-CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCC
Q 008063 478 LGSDWPVAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW 556 (579)
Q Consensus 478 ~gsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~ 556 (579)
+|||.+..+ .....+++.. .+ .++++++|+++|.|||+++|+++++|+|++||.|||||+|.||+
T Consensus 323 lgTD~~~~~~~~~~~e~~~~-------------~~-~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~ 388 (426)
T 2r8c_A 323 FGTDLLGEAQRLQSDEFRIL-------------AE-VLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPL 388 (426)
T ss_dssp CCCCCCGGGGGGTTHHHHHH-------------TT-TSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTT
T ss_pred EecCCCCCCCcchHHHHHHH-------------Hh-cCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChH
Confidence 999986433 2223333322 12 28999999999999999999999899999999999999999999
Q ss_pred CChhhccC--CeEEEEEECCEEeCC
Q 008063 557 EDFAAEVS--ASIEATYVSGVQAYP 579 (579)
Q Consensus 557 ~~~~~~~~--~~v~~v~v~G~~v~~ 579 (579)
+++..+.. .+|..||++|++||+
T Consensus 389 ~~~~~~~~~~~~v~~v~~~G~~v~~ 413 (426)
T 2r8c_A 389 KSVDCLLGQGEHIPLVMKDGRLFVN 413 (426)
T ss_dssp TCGGGTCSSSTTCCEEEETTEEEEE
T ss_pred hCHHHHhCcCCcceEEEECCEEEec
Confidence 97765532 589999999999873
No 5
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=3.9e-38 Score=338.05 Aligned_cols=388 Identities=18% Similarity=0.208 Sum_probs=256.0
Q ss_pred eeccCCCccEEEEcCeEE-eC--CCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccc
Q 008063 38 TTTTNLEADLVVTNGVIF-TG--DDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (579)
Q Consensus 38 ~~~~~~~~~~likn~~v~-~~--~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~ 114 (579)
.++..++++++|+|++++ ++ .+....+++|+|+||||++|++..+.+ +++.++||++|++|+|||||+|+|+..
T Consensus 22 ~~~~~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~---~~~~~viD~~g~~v~PGlID~H~Hl~~ 98 (479)
T 3h4u_A 22 NTSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP---ETADEVLDLRGHLVIPGLVNTHHHMYQ 98 (479)
T ss_dssp -------CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC---SCCSEEEECTTEEEEECEEECCCCGGG
T ss_pred CcccchhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC---CCCCeEEeCCCCEEecceeecccccch
Confidence 444456688999999966 33 344457889999999999999875533 257899999999999999999999976
Q ss_pred cCccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHH
Q 008063 115 GGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSV 194 (579)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~ 194 (579)
....... .....+. .+|+...
T Consensus 99 ~~~rg~~--~~~~~~l------------------------------------~~~l~~~--------------------- 119 (479)
T 3h4u_A 99 SLTRAVP--AAQNAEL------------------------------------FGWLTNL--------------------- 119 (479)
T ss_dssp GGSCSCT--TTTTCCH------------------------------------HHHHHHH---------------------
T ss_pred hhhcccc--ccCCCCH------------------------------------HHHHHHh---------------------
Confidence 5321000 0001111 1222111
Q ss_pred HHHHcCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCC
Q 008063 195 ALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGE 274 (579)
Q Consensus 195 ~~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~ 274 (579)
....+..++++.+.........++++|+|++.+++...+..
T Consensus 120 ---------------------------------------~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~ 160 (479)
T 3h4u_A 120 ---------------------------------------YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNG 160 (479)
T ss_dssp ---------------------------------------HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTT
T ss_pred ---------------------------------------hhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCc
Confidence 11123456788888888999999999999999985433322
Q ss_pred ccccchHHHHHHHHHHhhcCCCeeEEEEccCccc----------------hh----hHHHHHHhcCCCC-CCceEEceEE
Q 008063 275 SVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET----------------WS----SLADLINKTGHVL-SDWVYLGGVK 333 (579)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~----------------~~----~~~~~~~~~~~~~-~~~~~~~g~k 333 (579)
. .. ....+...+. +++......... .. ...+......... ...+ +
T Consensus 161 ~---~~---~~~~~~~~~~---g~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~ 226 (479)
T 3h4u_A 161 S---RL---DDSIGAAQRI---GMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAML-----R 226 (479)
T ss_dssp C---CH---HHHHHHHHHH---TCEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSE-----E
T ss_pred c---hH---HHHHHHHHHc---CCEEEEEeeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCce-----E
Confidence 1 12 2233333322 233322111000 01 1111111100000 0111 1
Q ss_pred EEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchH-HHHHHHHHHH----HHHHhcCC
Q 008063 334 AFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYK----SVVVTTGK 408 (579)
Q Consensus 334 ~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~-~~~~~~~~~~----~~~~~~~~ 408 (579)
+. .....+ ..++++.++++++.|+++|+++++|+.+.. ++...++.+. +.....+.
T Consensus 227 ~~---------~~~~~~----------~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~ 287 (479)
T 3h4u_A 227 VV---------VAPCSP----------FSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGW 287 (479)
T ss_dssp EE---------EEESCT----------TSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTC
T ss_pred EE---------EecCCC----------CCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 11 011122 236889999999999999999999998664 5555555442 34556777
Q ss_pred CCCCceEeeccCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--C
Q 008063 409 RDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--D 486 (579)
Q Consensus 409 ~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~ 486 (579)
.+.+..+.|+.++++++++++++.++.+++||.++. .++ ...++++.+.+.|+++++|||++.. .
T Consensus 288 ~~~~~~i~H~~~~~~~~~~~l~~~g~~v~~~p~s~~--------~l~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~ 354 (479)
T 3h4u_A 288 VGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNM--------RLA-----SGIAPVKKMRLAGVPVGLGVDGSASNDG 354 (479)
T ss_dssp CSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCCEEECCCCTTSSCC
T ss_pred CCCCeEEEEecCCCHHHHHHHHHcCCeEEEChhHhh--------hcC-----CCCCCHHHHHHCCCeEEEeCCCCccCCC
Confidence 788999999999999999999999999999999865 233 4566899999999999999998764 4
Q ss_pred CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCC-------h
Q 008063 487 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWED-------F 559 (579)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~-------~ 559 (579)
.+++.+++.++...... .....++++++|+++|.|||++||+++ +|+|++||.|||||+|.+++.. +
T Consensus 355 ~~~~~~~~~~~~~~~~~-----~~~~~l~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~ 428 (479)
T 3h4u_A 355 AQMVAEVRQALLLQRVG-----FGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGALHDPV 428 (479)
T ss_dssp CCHHHHHHHHHHHHHHH-----HCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTTCTTSHH
T ss_pred cCHHHHHHHHHHHhccc-----CCCCCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCccCCcccCHH
Confidence 78999998776532100 012348999999999999999999998 9999999999999999987541 1
Q ss_pred hhcc---CCeEEEEEECCEEeC
Q 008063 560 AAEV---SASIEATYVSGVQAY 578 (579)
Q Consensus 560 ~~~~---~~~v~~v~v~G~~v~ 578 (579)
.++. ..+|..||++|++||
T Consensus 429 ~~~~~~~~~~v~~v~v~G~~v~ 450 (479)
T 3h4u_A 429 AALVFCAPSQTAYTVVNGKVVV 450 (479)
T ss_dssp HHHHHSSCCCCSEEEETTEEEE
T ss_pred HHHHccCCCCcCEEEECCEEEE
Confidence 2221 458999999999987
No 6
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=3e-38 Score=336.65 Aligned_cols=390 Identities=17% Similarity=0.175 Sum_probs=259.3
Q ss_pred EEEEcC-eEEeCCC--CCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccc
Q 008063 47 LVVTNG-VIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (579)
Q Consensus 47 ~likn~-~v~~~~~--~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~ 123 (579)
++|+|+ .|+++++ ....+++|+|+||||++|++..+ . +++.++||++|++|+|||||+|+|+......... .
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~--~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~-~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLS--D--RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIP-Q 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCC--C--TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCG-G
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCC--C--CCCCeEEeCCCCEEecCeeecccccchhhhcccc-c
Confidence 789999 7777764 33478899999999999998632 1 3568999999999999999999999765331000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCC
Q 008063 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (579)
Q Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~ 203 (579)
....+.. +|+....
T Consensus 77 -~~~~~l~------------------------------------~~l~~~~----------------------------- 90 (456)
T 3ls9_A 77 -LERVTMA------------------------------------SWLEGVL----------------------------- 90 (456)
T ss_dssp -GSSCCHH------------------------------------HHHHHHH-----------------------------
T ss_pred -CCCCCHH------------------------------------HHHHHhc-----------------------------
Confidence 0011111 1211100
Q ss_pred CCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHH
Q 008063 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (579)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~ 283 (579)
... ..+.. ....++++.+.....+...++++|+|++.+++...+..... ...
T Consensus 91 -----------------------~~~-~~~~~-~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~---~~~ 142 (456)
T 3ls9_A 91 -----------------------TRS-AGWWR-DGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATAD---SYI 142 (456)
T ss_dssp -----------------------HHH-HHHHH-TTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCC---THH
T ss_pred -----------------------ccc-ccccc-cccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccc---hhH
Confidence 000 00000 01356788899999999999999999999984332222101 112
Q ss_pred HHHHHHHhhcCCCeeEEEEccCcc----------------chh----hHHHHHHhcCC-CCCCceEEceEEEEEcCccCC
Q 008063 284 ADVYQWASYSEKMKIRVCLFFPLE----------------TWS----SLADLINKTGH-VLSDWVYLGGVKAFADGSLGS 342 (579)
Q Consensus 284 ~~~~~~~~~~~~~~i~v~~~~~~~----------------~~~----~~~~~~~~~~~-~~~~~~~~~g~k~~~dg~~~~ 342 (579)
....+...+. +++........ ... ...++...... ..... +++..
T Consensus 143 ~~~~~a~~~~---g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~------ 208 (456)
T 3ls9_A 143 DATIEAATDL---GIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGM-----VRIAL------ 208 (456)
T ss_dssp HHHHHHHHHH---TCEEEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCS-----EEEEE------
T ss_pred HHHHHHHHHc---CCEEEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCc-----eEEEE------
Confidence 2223333222 33333321111 111 11111111000 00111 11110
Q ss_pred CcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHH----HHHHhcCCCCCCceEeec
Q 008063 343 NSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYK----SVVVTTGKRDQRFRIEHA 418 (579)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~ 418 (579)
.... ...++++.++++++.|+++|+++++|+.+.......++.+. +.....+..+.+..+.|+
T Consensus 209 ---~~~~----------~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~ 275 (456)
T 3ls9_A 209 ---GPCG----------VPYDKPELFEAFAQMAADYDVRLHTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHA 275 (456)
T ss_dssp ---CCCC----------TTTSCHHHHHHHHHHHHHHTCEEEEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTEEEEEC
T ss_pred ---ecCC----------CCCCCHHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCcEEEec
Confidence 0111 22378999999999999999999999997755555555443 345567777889999999
Q ss_pred cCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHH
Q 008063 419 QHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTA 496 (579)
Q Consensus 419 ~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~ 496 (579)
.++++++++++++.++.+++||.++. .++ ...++++.++++|+++++|||++.+ ..+++.+++.+
T Consensus 276 ~~~~~~~~~~l~~~g~~~~~~p~s~~--------~l~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~ 342 (456)
T 3ls9_A 276 VVPPREEIPEFADAGVAIAHLIAPDL--------RMG-----WGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLA 342 (456)
T ss_dssp CSCCGGGHHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCEEEEChhHHh--------hcC-----CCcchHHHHHHCCCcEEEECCCCccCCCCCHHHHHHHH
Confidence 99999999999999999999999765 233 4566899999999999999998765 46899999988
Q ss_pred HcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCCh------hhc----cCCe
Q 008063 497 MKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF------AAE----VSAS 566 (579)
Q Consensus 497 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~------~~~----~~~~ 566 (579)
+....... ....+.+++++++|+++|.|||+++|+++ +|+|++||.|||||||.+++... ..+ ...+
T Consensus 343 ~~~~~~~~--~~~~~~~~~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~ 419 (456)
T 3ls9_A 343 ALAHRPAD--PNEPEKWLSARELLRMATRGSAECLGRPD-LGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDR 419 (456)
T ss_dssp HHHTGGGS--TTCGGGSCCHHHHHHHTTHHHHHHTTCTT-SSCCSTTSBCCEEEEESCSGGGTTBSSHHHHHHHCCSBCC
T ss_pred HHHhcccc--ccccccCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEEeCCCCccCCCCChHHHhhccCCCCC
Confidence 75432110 01123379999999999999999999998 99999999999999999986521 111 1357
Q ss_pred EEEEEECCEEeC
Q 008063 567 IEATYVSGVQAY 578 (579)
Q Consensus 567 v~~v~v~G~~v~ 578 (579)
|..||++|++||
T Consensus 420 v~~v~v~G~~v~ 431 (456)
T 3ls9_A 420 ASLVVVNGQVLV 431 (456)
T ss_dssp CSEEEETTEEEE
T ss_pred eeEEEECCEEEE
Confidence 999999999987
No 7
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.3e-38 Score=337.72 Aligned_cols=381 Identities=19% Similarity=0.198 Sum_probs=259.1
Q ss_pred CCccEEEEcCeEEeCCC--CCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccc
Q 008063 43 LEADLVVTNGVIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (579)
Q Consensus 43 ~~~~~likn~~v~~~~~--~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~ 120 (579)
.+++++|+|++|+++++ ....+++|+|+||||++|++..+.+.. .++.++||++|++|+|||||+|+|+......
T Consensus 12 ~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~-~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~-- 88 (472)
T 4dzh_A 12 EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVR-FAPARTVSRPDAALMPGLVNAHTHNPMTLLR-- 88 (472)
T ss_dssp EEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHH-EEEEEEEEEEEEEEEECEEEEEECGGGGGGT--
T ss_pred CcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhc-CCCCeEEeCCCcEEEECccccccChhhHHhc--
Confidence 35779999999998753 345788999999999999987665422 2467899999999999999999999765321
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcC
Q 008063 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (579)
Q Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g 200 (579)
+... ..+..+|+....
T Consensus 89 -----g~~~---------------------------------~~~l~~~l~~~~-------------------------- 104 (472)
T 4dzh_A 89 -----GVAD---------------------------------DLPLMVWLQQHI-------------------------- 104 (472)
T ss_dssp -----TSSC---------------------------------SCCHHHHHHHTH--------------------------
T ss_pred -----cccC---------------------------------CCCHHHHHHHhh--------------------------
Confidence 1110 111122222100
Q ss_pred CCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccch
Q 008063 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (579)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~ 280 (579)
... .....++++.+.........++++|+|++.+++. ..
T Consensus 105 ------------------------------~~~--~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~ 143 (472)
T 4dzh_A 105 ------------------------------WPV--EAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYF---------FA 143 (472)
T ss_dssp ------------------------------HHH--HHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS---------CH
T ss_pred ------------------------------hhh--hhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------CH
Confidence 000 0001345788888888999999999999998752 11
Q ss_pred HHHHHHHHHHhhcCCCeeEEEEc-cCcc-----chhhHHH----HHHhcCCCCCCceEEceEEEEEcCccCCCcccccCC
Q 008063 281 EDFADVYQWASYSEKMKIRVCLF-FPLE-----TWSSLAD----LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEP 350 (579)
Q Consensus 281 ~~~~~~~~~~~~~~~~~i~v~~~-~~~~-----~~~~~~~----~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~ 350 (579)
. ...+.+.+.+ +...+... ...+ ..++..+ ...... ....+ ++.. ....+
T Consensus 144 ~---~~~~a~~~~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~~---------~~~~~ 203 (472)
T 4dzh_A 144 D---VQAAVYKQHG-FRALVGAVIIDFPTAWASSDDEYFARAGELHDQWR--DDPLI-----STAF---------APHAP 203 (472)
T ss_dssp H---HHHHHHHHTT-CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHT--TCSSE-----EEEE---------EECCT
T ss_pred H---HHHHHHHHhC-CeEEEEecccCCCcccccCHHHHHHHHHHHHHHhC--CCCce-----EEEE---------ecCCC
Confidence 1 2233333322 22222211 1111 1111111 111100 01122 1110 11222
Q ss_pred CCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHH----HHHHhcCCCCCCceEeeccCCChhh
Q 008063 351 YADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGT 425 (579)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~ 425 (579)
+ .++++.++++++.|+++|+++.+|+.+. .++...++.+. +.....+..+.+..+.|+.++++++
T Consensus 204 ~----------~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~~~~ 273 (472)
T 4dzh_A 204 Y----------TVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEAE 273 (472)
T ss_dssp T----------TSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHH
T ss_pred C----------CCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHH
Confidence 2 2688999999999999999999999855 44444444332 2344567778899999999999999
Q ss_pred HHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHHHcccCCC
Q 008063 426 AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPG 503 (579)
Q Consensus 426 ~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~~~~~~~~ 503 (579)
++++++.|+.+++||.++. .++ ....+++.+.++|+++++|||++.+ ..+++.+++.+.....
T Consensus 274 i~~l~~~g~~v~~~p~s~~--------~~~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~-- 338 (472)
T 4dzh_A 274 IHLCAERGVSVVHCPESNL--------KLA-----SGFCPACALQRASVNLAIGTDGCASNNDLDMFSENRTAAILAK-- 338 (472)
T ss_dssp HHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCEEEEChHHHH--------hcC-----CCCccHHHHHHCCCCEEEECCCCcCCCCCCHHHHHHHHHHHhh--
Confidence 9999999999999998764 233 4566899999999999999998754 5789999887754210
Q ss_pred CCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC------Chhhc----cCCeEEEEEEC
Q 008063 504 WDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE------DFAAE----VSASIEATYVS 573 (579)
Q Consensus 504 ~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~------~~~~~----~~~~v~~v~v~ 573 (579)
.......+++++++|+++|.|||+++|+++++|+|++||.|||||+|.+++. ++..+ ...+|..||++
T Consensus 339 --~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~l~~~~~~~~V~~v~v~ 416 (472)
T 4dzh_A 339 --AVANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPLHHVLSQLIYAAGRHQVTDVWIA 416 (472)
T ss_dssp --HHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHTCCGGGEEEEEET
T ss_pred --hhcCCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCCccCHHHHHhhcCCCCCceEEEEC
Confidence 0011345799999999999999999999998999999999999999998764 22333 25689999999
Q ss_pred CEEeC
Q 008063 574 GVQAY 578 (579)
Q Consensus 574 G~~v~ 578 (579)
|++||
T Consensus 417 G~~v~ 421 (472)
T 4dzh_A 417 GKPKL 421 (472)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 99987
No 8
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=1.6e-37 Score=332.16 Aligned_cols=381 Identities=23% Similarity=0.274 Sum_probs=256.6
Q ss_pred cCCCccEEEEcCeEEeCCCCC--------CeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccc
Q 008063 41 TNLEADLVVTNGVIFTGDDSL--------LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHF 112 (579)
Q Consensus 41 ~~~~~~~likn~~v~~~~~~~--------~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~ 112 (579)
+..+++++|+|++|+++++.. ..+++|+|+||||++|++..+ .. +++.++||++|++|+|||||+|+|+
T Consensus 19 ~~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~-~~--~~~~~viD~~g~~v~PGlID~H~H~ 95 (468)
T 3lnp_A 19 PKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSS-CQ--IPATETLDLGQQVLMPGWVNAHGHA 95 (468)
T ss_dssp --CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTT-CC--CCEEEEEECCSEEEEECEEECSCCG
T ss_pred CCccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCcc-cc--CCCCeEEeCCCcEEEeCeechhhCh
Confidence 345678999999999986543 468899999999999998654 11 3567899999999999999999999
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhc
Q 008063 113 IPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLAN 192 (579)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n 192 (579)
..... +|... ..+...|+....
T Consensus 96 ~~~~~-------~g~~~---------------------------------~~~l~~wl~~~~------------------ 117 (468)
T 3lnp_A 96 AMSLF-------RGLAD---------------------------------DLPLMTWLQEHV------------------ 117 (468)
T ss_dssp GGGGG-------TTSSC---------------------------------SCCHHHHHHHTH------------------
T ss_pred hhhhh-------ccCcC---------------------------------CCCHHHHHHHhh------------------
Confidence 65322 11110 111222222100
Q ss_pred HHHHHHcCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCC
Q 008063 193 SVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYP 272 (579)
Q Consensus 193 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~ 272 (579)
... .....++++.+.........++++|+|++.++...
T Consensus 118 --------------------------------------~~~--~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~-- 155 (468)
T 3lnp_A 118 --------------------------------------WPA--EAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY-- 155 (468)
T ss_dssp --------------------------------------HHH--HHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCSC--
T ss_pred --------------------------------------hhh--hhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC--
Confidence 000 00013457788888889999999999999997421
Q ss_pred CCccccchHHHHHHHHHHhhcCCCeeEEEEcc-----Ccc---chhh----HHHHHHhcCCC---CCCceEEceEEEEEc
Q 008063 273 GESVQLSWEDFADVYQWASYSEKMKIRVCLFF-----PLE---TWSS----LADLINKTGHV---LSDWVYLGGVKAFAD 337 (579)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~-----~~~---~~~~----~~~~~~~~~~~---~~~~~~~~g~k~~~d 337 (579)
.. ...+...+.+ ++..... +.. ..++ ..++....... ....+ ++..
T Consensus 156 -------~~---~~~~~~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i-----~~~~- 216 (468)
T 3lnp_A 156 -------PQ---QSGEAALAAG---IRAVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLV-----QIGF- 216 (468)
T ss_dssp -------HH---HHHHHHHHHT---CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCE-----EEEE-
T ss_pred -------HH---HHHHHHHHcC---CeEEEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceE-----EEEE-
Confidence 11 2222222222 3333211 110 1111 11111110000 00111 1110
Q ss_pred CccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHH----HHHHhcCCCCCC
Q 008063 338 GSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGKRDQR 412 (579)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~----~~~~~~~~~~~~ 412 (579)
....+ ..++++.++++++.|+++|+++++|+.+. .++...++.+. +.....+..+.+
T Consensus 217 --------~~~~~----------~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~l~~~ 278 (468)
T 3lnp_A 217 --------GPHAP----------YTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNER 278 (468)
T ss_dssp --------EECCT----------TTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCHHHHHHHTTCCSTT
T ss_pred --------EcCCC----------CCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCC
Confidence 01111 23688999999999999999999999866 45555554332 234556777889
Q ss_pred ceEeeccCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHH
Q 008063 413 FRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPL 490 (579)
Q Consensus 413 ~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~ 490 (579)
..+.|+.++++++++++++.|+.+++||.++. .++ ...++++.+++.|+++++|||++.. ..+++
T Consensus 279 ~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~--------~~~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~ 345 (468)
T 3lnp_A 279 VSCVHMTQVDDGDIKILQKTGASIIHCPESNL--------KLA-----SGFCPIAKLSAANIPLAIGTDGAASNNDLDMF 345 (468)
T ss_dssp EEEEECCSCCHHHHHHHHHHCCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCCEEECCCCTTSSCCCCHH
T ss_pred eEEEeccCCCHHHHHHHHhcCCEEEEChhhhh--------hcC-----CCCCCHHHHHHCCCeEEEECCCCcCCCCCCHH
Confidence 99999999999999999999999999998764 223 4566899999999999999998765 47899
Q ss_pred HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC--C----hhhc--
Q 008063 491 CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE-- 562 (579)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~--~----~~~~-- 562 (579)
.+++.++..... ......+++++++|+++|.|||+++|+++++|+|++||.|||||||.+++. + +..+
T Consensus 346 ~~~~~~~~~~~~----~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~ 421 (468)
T 3lnp_A 346 SETKTAALLAKG----VSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVSHMVY 421 (468)
T ss_dssp HHHHHHHHHHHH----HHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHH
T ss_pred HHHHHHHHHhhh----ccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCccCHHHHhhc
Confidence 998877531100 001245799999999999999999999998999999999999999999754 1 1121
Q ss_pred --cCCeEEEEEECCEEeC
Q 008063 563 --VSASIEATYVSGVQAY 578 (579)
Q Consensus 563 --~~~~v~~v~v~G~~v~ 578 (579)
...+|..||++|++||
T Consensus 422 ~~~~~~v~~v~v~G~~v~ 439 (468)
T 3lnp_A 422 CTKSTQVSHVWVNGRCLL 439 (468)
T ss_dssp SCCGGGEEEEEETTEEEE
T ss_pred cCCCCCceEEEECCEEEE
Confidence 2468999999999997
No 9
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.3e-38 Score=333.28 Aligned_cols=378 Identities=20% Similarity=0.232 Sum_probs=257.5
Q ss_pred CCccEEEEcCeEEeCC--CCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccc
Q 008063 43 LEADLVVTNGVIFTGD--DSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (579)
Q Consensus 43 ~~~~~likn~~v~~~~--~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~ 120 (579)
.+++++|+|++|++++ +....+++|+|+||||++|++..+... +++.++||++|++|+|||||+|+|+.....
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~--- 80 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMR--HGATEIRELPGMLLAPGLVNAHGHSAMSLF--- 80 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTT--TCEEEEEEEEEEEEEECEEECCCCGGGGGG---
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCcccccc--CCCCeEEeCCCCEEeecccchhhChhhHHh---
Confidence 4678999999999965 334467899999999999998766522 356789999999999999999999965422
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcC
Q 008063 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (579)
Q Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g 200 (579)
+|... ..|...|+....
T Consensus 81 ----~g~~~---------------------------------~~~l~~wl~~~~-------------------------- 97 (451)
T 4dyk_A 81 ----RGLAD---------------------------------DLPLMTWLQDHI-------------------------- 97 (451)
T ss_dssp ----TTSSC---------------------------------SSCHHHHHHHTH--------------------------
T ss_pred ----ccCCC---------------------------------CCCHHHHHHHhh--------------------------
Confidence 11111 112222222200
Q ss_pred CCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccch
Q 008063 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (579)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~ 280 (579)
... .....++++.+.....+...++++|+|++.++... .
T Consensus 98 ------------------------------~~~--~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~ 136 (451)
T 4dyk_A 98 ------------------------------WPA--EGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY---------P 136 (451)
T ss_dssp ------------------------------HHH--HHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC---------H
T ss_pred ------------------------------hhh--hhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC---------H
Confidence 000 00013457778888889999999999999987421 1
Q ss_pred HHHHHHHHHHhhcCCCeeEEEEc---cCcc-----chhh----HHHHHHhcCCCCCCceEEceEEEEEcCccCCCccccc
Q 008063 281 EDFADVYQWASYSEKMKIRVCLF---FPLE-----TWSS----LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFH 348 (579)
Q Consensus 281 ~~~~~~~~~~~~~~~~~i~v~~~---~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~ 348 (579)
. ...+.+.+.+ ++.... ...+ ..++ ..++..... .... +++.. ...
T Consensus 137 ~---~~~~a~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----v~~~~---------~~~ 194 (451)
T 4dyk_A 137 Q---AICGVVHDSG---VRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLK--HHPR-----IRIAF---------GPH 194 (451)
T ss_dssp H---HHHHHHHHHT---CEEEEEEEECSSCBTTBSSHHHHHHHHHHHHHHTT--TCSS-----EEEEE---------EEC
T ss_pred H---HHHHHHHHcC---CeEEEEchhhCCCCccccCHHHHHHHHHHHHHHhc--CCCc-----eEEEE---------ecC
Confidence 1 2222222222 332221 1111 1111 111111100 1111 11110 111
Q ss_pred CCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHH----HHHHhcCCCCCCceEeeccCCCh
Q 008063 349 EPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLAS 423 (579)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~ 423 (579)
.+ ..++++.++++++.|+++|+++++|+.+. .++...++.+. +.....+..+.+..+.|+.++++
T Consensus 195 ~~----------~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~ 264 (451)
T 4dyk_A 195 AP----------YTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDN 264 (451)
T ss_dssp CG----------GGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCCCCH
T ss_pred CC----------CccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEECCCCCH
Confidence 22 23688999999999999999999999866 34555554332 23455677788999999999999
Q ss_pred hhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHHHcccC
Q 008063 424 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIP 501 (579)
Q Consensus 424 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~~~~~~ 501 (579)
++++++++.|+.+++||.++. .++ ...++++.++++|+++++|||++.. ..+++.+++.++....
T Consensus 265 ~~~~~l~~~g~~v~~~p~s~~--------~~~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~ 331 (451)
T 4dyk_A 265 DDLAMLVETNSSVIHCPESNL--------KLA-----SGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAK 331 (451)
T ss_dssp HHHHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHHTCCEEECCCCGGGSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEChhhhh--------hcc-----CCcccHHHHHhCCCeEEEECCCCccCCCCCHHHHHHHHHHHhh
Confidence 999999999999999998764 222 4566899999999999999998754 4689999987762110
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC--C----hhhc----cCCeEEEEE
Q 008063 502 PGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE----VSASIEATY 571 (579)
Q Consensus 502 ~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~--~----~~~~----~~~~v~~v~ 571 (579)
. ......+++++++|+++|.|||+++|+++++|+|++||.|||||+|.+++. + +..+ ...+|..||
T Consensus 332 ~----~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 407 (451)
T 4dyk_A 332 A----VYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVYDPVSQLIYASGRDCVRHVW 407 (451)
T ss_dssp H----HHTCTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHHCCGGGEEEEE
T ss_pred h----hcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCCCCCHHHHhhccCCCCCccEEE
Confidence 0 001245799999999999999999999998999999999999999999764 1 1222 245899999
Q ss_pred ECCEEeC
Q 008063 572 VSGVQAY 578 (579)
Q Consensus 572 v~G~~v~ 578 (579)
++|++||
T Consensus 408 v~G~~v~ 414 (451)
T 4dyk_A 408 VGGRQLL 414 (451)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 9999987
No 10
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=1.4e-37 Score=330.72 Aligned_cols=380 Identities=18% Similarity=0.212 Sum_probs=256.9
Q ss_pred CCccEEEEcCeEEeCCC--CCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccc
Q 008063 43 LEADLVVTNGVIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (579)
Q Consensus 43 ~~~~~likn~~v~~~~~--~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~ 120 (579)
.+++++|+|++|+++++ ....+++|+|+||||++|++..+.+. .++.++||++|++|+|||||+|+|+.....
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~--- 78 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAG--LEADERLELPDHVLMPGLINLHGHSAMSLL--- 78 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTT--SCEEEEEEEEEEEEEECEEEEEECGGGGGG---
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEeccccccc--CCCCeEEeCCCcEEeeCccchhhChhhHhh---
Confidence 35789999999998754 33468899999999999999776542 356789999999999999999999965322
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcC
Q 008063 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (579)
Q Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g 200 (579)
++... ..+..+|+....
T Consensus 79 ----~g~~~---------------------------------~~~~~~wl~~~~-------------------------- 95 (447)
T 4f0r_A 79 ----RGLAD---------------------------------DKALMDWLTNYI-------------------------- 95 (447)
T ss_dssp ----TTSSC---------------------------------SSCHHHHHHHTH--------------------------
T ss_pred ----ccCCC---------------------------------CCCHHHHHHHhh--------------------------
Confidence 11110 111122222100
Q ss_pred CCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccch
Q 008063 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (579)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~ 280 (579)
... ..+..++++...........++++|+|++.++... .
T Consensus 96 ------------------------------~~~--~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~ 134 (447)
T 4f0r_A 96 ------------------------------WPT--EGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFY---------N 134 (447)
T ss_dssp ------------------------------HHH--HHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBSC---------H
T ss_pred ------------------------------hhh--hhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC---------H
Confidence 000 00123457777888888999999999999997421 1
Q ss_pred HHHHHHHHHHhhcCCCeeEEEEcc-----Ccc---chhhHHHHHHh-cCC-CCCCceEEceEEEEEcCccCCCcccccCC
Q 008063 281 EDFADVYQWASYSEKMKIRVCLFF-----PLE---TWSSLADLINK-TGH-VLSDWVYLGGVKAFADGSLGSNSALFHEP 350 (579)
Q Consensus 281 ~~~~~~~~~~~~~~~~~i~v~~~~-----~~~---~~~~~~~~~~~-~~~-~~~~~~~~~g~k~~~dg~~~~~~~~~~~~ 350 (579)
. ...+.+.+.+ ++..... +.. ..++..+.... ... ..... +++.. ....+
T Consensus 135 ~---~~~~~~~~~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~---------~~~~~ 194 (447)
T 4f0r_A 135 A---AVARAGLASG---MRTFVGCSILEFPTNYASNADDYIAKGMAERSQFLGEDL-----LTFTL---------APHAP 194 (447)
T ss_dssp H---HHHHHHHHHT---CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHTTTTCTT-----EEEEE---------EECCG
T ss_pred H---HHHHHHHHcC---CeEEEEchhcCCCcccccCHHHHHHHHHHHHHHhcCCCc-----eEEEE---------ecCCC
Confidence 1 2222222222 3333211 111 11111111111 000 01112 22211 01111
Q ss_pred CCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHH----HHHHHhcCCCCCCceEeeccCCChhh
Q 008063 351 YADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGT 425 (579)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~ 425 (579)
..++++.++++++.|++.|+++.+|+.+. .++...++.+ -+.....+..+.+..+.|+.++++++
T Consensus 195 ----------~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~ 264 (447)
T 4f0r_A 195 ----------YTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAE 264 (447)
T ss_dssp ----------GGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHH
T ss_pred ----------CCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHH
Confidence 23688999999999999999999999876 5555555433 12344567778899999999999999
Q ss_pred HHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHHHcccCCC
Q 008063 426 AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPG 503 (579)
Q Consensus 426 ~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~~~~~~~~ 503 (579)
++++++.|+.+++||.++. .++ ....+++.+.+.|+++++|||++.. ..+++.+++.+......
T Consensus 265 ~~~~~~~g~~~~~~p~~~~--------~~~-----~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~- 330 (447)
T 4f0r_A 265 VELAARHGLSTAHNPASNM--------KLA-----SGISPVSKLMDAGVAVGIGTDGAASNNKLDMLAETRLAALLAKV- 330 (447)
T ss_dssp HHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCCGGGTCCCCHHHHHHHHHHHHHH-
T ss_pred HHHHHHcCCEEEECchhhh--------hcC-----CCCCcHHHHHHCCCcEEEeCCCCcCCCCCCHHHHHHHHHHHhhh-
Confidence 9999999999999998764 222 4566899999999999999998755 46889888876521100
Q ss_pred CCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC--C----hhhc----cCCeEEEEEEC
Q 008063 504 WDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE----VSASIEATYVS 573 (579)
Q Consensus 504 ~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~--~----~~~~----~~~~v~~v~v~ 573 (579)
......+++++++++++|.|||+++|+++++|+|++||.|||||||.+++. + +..+ ...+|..||++
T Consensus 331 ---~~~~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~ 407 (447)
T 4f0r_A 331 ---GTLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQVSHVWVK 407 (447)
T ss_dssp ---HHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHTCCGGGEEEEEET
T ss_pred ---hccCCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCCcChHHHheecCCCCCceEEEEC
Confidence 001245799999999999999999999998999999999999999999754 1 1111 24689999999
Q ss_pred CEEeC
Q 008063 574 GVQAY 578 (579)
Q Consensus 574 G~~v~ 578 (579)
|++||
T Consensus 408 G~~v~ 412 (447)
T 4f0r_A 408 GRALM 412 (447)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 99987
No 11
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=1.3e-35 Score=317.40 Aligned_cols=203 Identities=19% Similarity=0.210 Sum_probs=159.8
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHH------HHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcE
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMY------KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 435 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~------~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~ 435 (579)
++++.++++++.|+++|+++++|+.+. .++..+.+.+ .+.....+..+.+..+.|+.++++++++++++.++.
T Consensus 240 ~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~ 319 (476)
T 4aql_A 240 CSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGAS 319 (476)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCE
T ss_pred CCHHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCE
Confidence 789999999999999999999999865 3455555432 234556777788999999999999999999999999
Q ss_pred EEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC-CCCCHHHHHHHHHcccCCCCCCCCCCCCCC
Q 008063 436 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERI 514 (579)
Q Consensus 436 ~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 514 (579)
+++||.++. .++ ....+++.+++.|+++++|||.+. .+.+++.+++.++...... ........++
T Consensus 320 v~~~P~sn~--------~l~-----~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~l 385 (476)
T 4aql_A 320 IAHCPNSNL--------SLS-----SGFLNVLEVLKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNIL-LINKVNEKSL 385 (476)
T ss_dssp EEECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCTTTSSCCCHHHHHHHHHHHHHHH-HHTTSSSSCC
T ss_pred EEECchhhh--------hhC-----cchHHHHHHHHCCCcEEEeCCCCCCCCCCHHHHHHHHHHHHhhh-hcccCCCCcC
Confidence 999999875 333 456689999999999999999763 3578999988776421000 0000134579
Q ss_pred CHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCC----CCCC-------------hhhc----cCCeEEEEEEC
Q 008063 515 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS----SWED-------------FAAE----VSASIEATYVS 573 (579)
Q Consensus 515 s~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~----~~~~-------------~~~~----~~~~v~~v~v~ 573 (579)
+++++|+++|.|||++||+++++|+|++||.|||||+|.+ |+.. +..+ ...+|..||++
T Consensus 386 ~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~~~~~V~~v~v~ 465 (476)
T 4aql_A 386 TLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVG 465 (476)
T ss_dssp CHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCTTCSCCCCTHHHHSSSTTHHHHHHHHHCCGGGEEEEEET
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEcCCCCCCccccccccccCCchhcHHHHHhhcCCCCCccEEEEC
Confidence 9999999999999999999998999999999999999988 3321 1111 13479999999
Q ss_pred CEEeCC
Q 008063 574 GVQAYP 579 (579)
Q Consensus 574 G~~v~~ 579 (579)
||+||+
T Consensus 466 G~~v~~ 471 (476)
T 4aql_A 466 GKQVVP 471 (476)
T ss_dssp TEEEEC
T ss_pred CEEEec
Confidence 999974
No 12
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=1.3e-35 Score=312.85 Aligned_cols=362 Identities=18% Similarity=0.189 Sum_probs=242.9
Q ss_pred CCccEEEEcCeEEeCCCC-CCeeeEEEEECCEEEEecChHHHHhhccCCC--eEEeCCCCeeecccccccccccccCccc
Q 008063 43 LEADLVVTNGVIFTGDDS-LLFADSMAIKNGRIVSVGNYSAVQQLAADGT--NVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (579)
Q Consensus 43 ~~~~~likn~~v~~~~~~-~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~--~viD~~g~~V~PG~ID~H~H~~~~~~~~ 119 (579)
+.++++|+|++|+++++. ...+++|+|+||||++|++.. . +++. ++||++|++|+|||||+|+|+......
T Consensus 5 ~~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~--~---~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~- 78 (418)
T 2qs8_A 5 VDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF--I---SSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQS- 78 (418)
T ss_dssp --CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC--C---CCTTSSEEEEEEEEEEEECEEEEEECTTCCCCC-
T ss_pred CCccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC--C---CCCCcceEEECCCCEECCCeeeeeeccccCCCC-
Confidence 456799999999998765 335679999999999998753 1 2456 899999999999999999998653210
Q ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHc
Q 008063 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (579)
Q Consensus 120 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~ 199 (579)
..| +.
T Consensus 79 ---------------------------------~~~---------------~~--------------------------- 83 (418)
T 2qs8_A 79 ---------------------------------KAQ---------------AP--------------------------- 83 (418)
T ss_dssp ---------------------------------TTT---------------SC---------------------------
T ss_pred ---------------------------------Cch---------------hh---------------------------
Confidence 000 00
Q ss_pred CCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccc
Q 008063 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (579)
Q Consensus 200 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~ 279 (579)
+ ..++++.........+.++++|+|++.+++... .
T Consensus 84 -------------------------------------~-~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~----~--- 118 (418)
T 2qs8_A 84 -------------------------------------I-KVEREMQAILATQHAYVTFKSGFTTVRQVGDSG----L--- 118 (418)
T ss_dssp -------------------------------------S-CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSS----S---
T ss_pred -------------------------------------h-cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCc----c---
Confidence 0 012233344445578889999999999975311 0
Q ss_pred hHHHHHHHHHHhhcCC-CeeEEEEccCc-----------------------------cchhhHHHHHHhcCCCCCCceEE
Q 008063 280 WEDFADVYQWASYSEK-MKIRVCLFFPL-----------------------------ETWSSLADLINKTGHVLSDWVYL 329 (579)
Q Consensus 280 ~~~~~~~~~~~~~~~~-~~i~v~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~ 329 (579)
. ...++...+.+. .+.++...... ...++..+......... .
T Consensus 119 ~---~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~ 190 (418)
T 2qs8_A 119 V---AISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDG-----A 190 (418)
T ss_dssp H---HHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHT-----C
T ss_pred c---cHHHHHHHHCCCCCCCeEEecCccccccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcC-----C
Confidence 1 112333333332 23344331100 00111122211100001 1
Q ss_pred ceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCC
Q 008063 330 GGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKR 409 (579)
Q Consensus 330 ~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~ 409 (579)
..+|++.+|.+...... .+...++++.++++++.|++.|+++.+|+.++.+++..++. +
T Consensus 191 ~~ik~~~~g~~~~~~~~-----------~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g-- 249 (418)
T 2qs8_A 191 DGIKITVTGGVLSVAKS-----------GQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAIKA--------G-- 249 (418)
T ss_dssp SEEEEECBCCSSSSSSC-----------SSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------T--
T ss_pred CEEEEEecCCCCCCCCC-----------CCcccCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHc--------C--
Confidence 35788888765332211 12344789999999999999999999999987766655532 2
Q ss_pred CCCceEeeccCCChhhHHHHhhCCcEEEecccccccchhHHH---HhhCh----hhh----hhhhhhHHHHHHCCCeeee
Q 008063 410 DQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSAR---KKLGV----DRA----ERESYLFQSLLANNALLAL 478 (579)
Q Consensus 410 ~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~---~~l~~----~~~----~~~~~~l~~l~~~Gi~v~~ 478 (579)
...+.|+.++++++++++++.|+.+ +|........... ..+++ .+. .....+++.++++|+++++
T Consensus 250 --~~~i~H~~~~~~~~i~~l~~~gv~v--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~ 325 (418)
T 2qs8_A 250 --VDSIEHGTFMDLEAMDLMIENGTYY--VPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAF 325 (418)
T ss_dssp --CSEEEECTTCCHHHHHHHHHHTCEE--ECCHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred --CCEEEECCCCCHHHHHHHHHCCCEE--eeeechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4589999999999999999999864 5653211000000 01111 111 0235678999999999999
Q ss_pred cCCCCCCC-CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC
Q 008063 479 GSDWPVAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE 557 (579)
Q Consensus 479 gsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~ 557 (579)
|||.+..+ .+++.+++.++. .+++++++|+++|.|||+++|+++++|+|+|||.|||||+|.||++
T Consensus 326 gTD~~~~~~~~~~~e~~~~~~-------------~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~ 392 (418)
T 2qs8_A 326 GTDAGVQKHGTNWKEFVYMVE-------------NGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIE 392 (418)
T ss_dssp CCCBTTBCTTCTTHHHHHHHH-------------TTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTT
T ss_pred eCCCCcCCcchHHHHHHHHHH-------------cCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhh
Confidence 99986533 466777766543 2599999999999999999999988999999999999999999999
Q ss_pred ChhhccCCeEEEEEECCEEeC
Q 008063 558 DFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 558 ~~~~~~~~~v~~v~v~G~~v~ 578 (579)
++.++. ++..||++|+++.
T Consensus 393 ~~~~~~--~i~~v~~~G~~~~ 411 (418)
T 2qs8_A 393 DISVLE--NVDVVIKDGLLYE 411 (418)
T ss_dssp CGGGGG--GEEEEEETTEEEE
T ss_pred CHHHhc--CccEEEECCEEEe
Confidence 887765 8999999999874
No 13
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=9.4e-36 Score=320.57 Aligned_cols=391 Identities=15% Similarity=0.173 Sum_probs=239.4
Q ss_pred CCccEEEEcCe-EEeCCCC------CCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeeccccccccccccc
Q 008063 43 LEADLVVTNGV-IFTGDDS------LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (579)
Q Consensus 43 ~~~~~likn~~-v~~~~~~------~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~ 115 (579)
.+++++|+|++ |+++++. ....++|+|+||||++|++..+ +++.++||++|++|+|||||+|+|+..+
T Consensus 8 ~~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-----~~~~~viD~~G~~v~PG~ID~H~H~~~~ 82 (492)
T 2paj_A 8 TQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-----RPGETIVDATDCVIYPAWVNTHHHLFQS 82 (492)
T ss_dssp --CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-----CTTCEEEECBTCEEEECEECCCCCGGGG
T ss_pred CCCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-----CCCCeEEECCCcEEeeCccccccChhhH
Confidence 34679999999 9998732 2367799999999999997542 1456899999999999999999999765
Q ss_pred CccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHH
Q 008063 116 GLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVA 195 (579)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~ 195 (579)
... +..... ..+...|+...
T Consensus 83 ~~~-------g~~~~~-------------------------------~~~~~~~l~~~---------------------- 102 (492)
T 2paj_A 83 LLK-------GEPAGL-------------------------------DATLTPWLAAT---------------------- 102 (492)
T ss_dssp GCC-------SCC-------------------------------------------------------------------
T ss_pred hhc-------CccCCC-------------------------------CCCHHHHHHhc----------------------
Confidence 321 000000 00000111100
Q ss_pred HHHcCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCc
Q 008063 196 LQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGES 275 (579)
Q Consensus 196 ~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~ 275 (579)
.....+..++++.........+.+++.|+|++.+++...+...
T Consensus 103 -------------------------------------~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~ 145 (492)
T 2paj_A 103 -------------------------------------PYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGM 145 (492)
T ss_dssp ----------------------------------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTC
T ss_pred -------------------------------------ccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhccccc
Confidence 0001123466888888888999999999999999863222110
Q ss_pred cccchHHHHHHHHHHhhcCCCeeEEEEccCccc---------------------hhhHHHHHHhcCCCCCCceEEceEEE
Q 008063 276 VQLSWEDFADVYQWASYSEKMKIRVCLFFPLET---------------------WSSLADLINKTGHVLSDWVYLGGVKA 334 (579)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~g~k~ 334 (579)
. ...+....+...+ .++++........ ..+..++...... .... +.+++
T Consensus 146 ~---~~~~~~~~~~~~~---~g~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~ 215 (492)
T 2paj_A 146 P---FDSSAILFEEAEK---LGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHD-ASPR---AMRRV 215 (492)
T ss_dssp S---SCHHHHHHHHHHH---TTCEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCC-CSTT---CSEEE
T ss_pred c---cchHHHHHHHHHH---cCCEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhcc-CCCC---CceEE
Confidence 1 1122222222222 3455543221110 0011111111000 0000 00121
Q ss_pred EEcCccCCCcccccCCCCCCCCCCcc-cCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHH----HHHHhcCC
Q 008063 335 FADGSLGSNSALFHEPYADEPHNYGL-QVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGK 408 (579)
Q Consensus 335 ~~dg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~----~~~~~~~~ 408 (579)
.. .+ .+. ..++++.++++++.|++.|+++.+|+.+. .+++..++.+. +.....+.
T Consensus 216 ~~------------~~-------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 276 (492)
T 2paj_A 216 VM------------AP-------TTVLYSISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAFCGEHDW 276 (492)
T ss_dssp EE------------CC-------TTTTTSSCHHHHHHHHHHHHHTTCEEEEECC-------------CCCHHHHHHHTTC
T ss_pred EE------------ec-------ccCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHHHHHCCC
Confidence 11 01 011 23688999999999999999999999864 44444443221 22234566
Q ss_pred CCCCceEeeccCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC--CC
Q 008063 409 RDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV--AD 486 (579)
Q Consensus 409 ~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~--~~ 486 (579)
.+.+..+.|+.++++++++++++.|+.+++||.++. .++ ...+|++.++++|+++++|||++. ..
T Consensus 277 ~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~~~--------~l~-----~~~~p~~~~~~~Gv~v~lgTD~~~~~~~ 343 (492)
T 2paj_A 277 LGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNG--------RLG-----SGICPVREMADAGVPVSIGVDGAASNEA 343 (492)
T ss_dssp CSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHH--------CC----------CCTTHHHHTCCEEECCCHHHHCSC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHcCCEEEECchhhc--------ccC-----CCCCCHHHHHHCCCcEEEeCCCCCCCCC
Confidence 666788999999999999999999999999997653 122 334578889999999999999754 34
Q ss_pred CCHHHHHHHHHcccCCCC-----C-----CCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCC
Q 008063 487 INPLCAIRTAMKRIPPGW-----D-----NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW 556 (579)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~ 556 (579)
.+++.+++.++.+..... . ..+....+++++++|+++|.|||++||++ .+|+|+|||.|||||+|.|++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~-~~Gsl~~Gk~ADlvvld~~~~ 422 (492)
T 2paj_A 344 ADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD-EVGKVAVGYAADIAVYRLDDP 422 (492)
T ss_dssp CSHHHHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT-TSSCCSTTSBCCEEEEECCSG
T ss_pred CCHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC-CccccCCCCccCEEEEeCCCc
Confidence 688988887654221000 0 00113467999999999999999999999 689999999999999999964
Q ss_pred C------Chhhc----cCCeEEEEEECCEEeC
Q 008063 557 E------DFAAE----VSASIEATYVSGVQAY 578 (579)
Q Consensus 557 ~------~~~~~----~~~~v~~v~v~G~~v~ 578 (579)
. +.+.+ ...+|..||++|++||
T Consensus 423 ~~~~~~~p~~~i~~~~~~~~v~~v~v~G~~v~ 454 (492)
T 2paj_A 423 RYFGLHDPAIGPVASGGRPSVMALFSAGKRVV 454 (492)
T ss_dssp GGTTCSSGGGHHHHSCSCCEEEEEEETTEEEE
T ss_pred ccCCccCHHHHHHhcCCCCCceEEEECCEEEE
Confidence 2 22333 1347999999999987
No 14
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=5.3e-35 Score=311.78 Aligned_cols=382 Identities=18% Similarity=0.169 Sum_probs=239.1
Q ss_pred CCccEEEEcCeEEeCCCCC-CeeeEEEE-ECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccc
Q 008063 43 LEADLVVTNGVIFTGDDSL-LFADSMAI-KNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (579)
Q Consensus 43 ~~~~~likn~~v~~~~~~~-~~~~~v~I-~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~ 120 (579)
...+++|+|++|+++++.. ..+++|+| +||||++|++..+... +.+.++||++|++|+|||||+|+|+..++...
T Consensus 11 ~~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~--~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~- 87 (458)
T 2p9b_A 11 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSI--PAEYHYLDGTGKIVMPGLINAHTHLFSQGKPL- 87 (458)
T ss_dssp CCCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCC--CTTCEEEECTTCEEEECEEEEEECSCC------
T ss_pred CCCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCC--CCCCeEEECCCCEEccceeeeeeccccccccc-
Confidence 4567999999999987543 34579999 9999999997322111 24568999999999999999999997543210
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcC
Q 008063 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (579)
Q Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g 200 (579)
....+.+++..++... ..
T Consensus 88 ----~~~~~~~~~~~~~~~~---------------------------------~~------------------------- 105 (458)
T 2p9b_A 88 ----NPKLATPKGQRMVATF---------------------------------AH------------------------- 105 (458)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----cccccchhhhhhhhhh---------------------------------hh-------------------------
Confidence 0000000000000000 00
Q ss_pred CCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccch
Q 008063 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (579)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~ 280 (579)
...+.++....+....+.++++|+|++.+++... + .
T Consensus 106 -------------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~----~---~ 141 (458)
T 2p9b_A 106 -------------------------------------SPLGKPYMAATVKHNATTLLESGVTTIRTLGDVG----Y---E 141 (458)
T ss_dssp -------------------------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSS----S---H
T ss_pred -------------------------------------hcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCc----c---c
Confidence 0001122344556688899999999999975311 1 1
Q ss_pred HHHHHHHHHHhhcCCC-eeEEEEccCc----------------cchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCC
Q 008063 281 EDFADVYQWASYSEKM-KIRVCLFFPL----------------ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSN 343 (579)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~i~v~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~ 343 (579)
...++.+.+.+.. +.+++...+. ....+..+......... ...+|++.+|.+...
T Consensus 142 ---~~~~~~~~~~g~~~g~r~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~g~~~~~ 213 (458)
T 2p9b_A 142 ---VVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAG-----VNAIKIAATGGVTDA 213 (458)
T ss_dssp ---HHHHHHHHHTTSSCCCEEECCCSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTT-----CSCEEEECSCCTTSC
T ss_pred ---cHHHHHHHHcCCCCCCeEEecccccccCCCCCccccCccCCCHHHHHHHHHHHHHcC-----CCEEEEEecCCcCCC
Confidence 1223333333322 2354432110 11112222221111111 124788877654322
Q ss_pred cccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCCh
Q 008063 344 SALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS 423 (579)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~ 423 (579)
.+. . ..+...++++.+.++++.|++.|+++.+|+.++..++..++. | ...+.|+..+++
T Consensus 214 ~~~------~---~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~i~~~~~~--------G----~~~i~H~~~~~~ 272 (458)
T 2p9b_A 214 QEI------G---EAGSPQMSVEQMRAICDEAHQYGVIVGAHAQSPEGVRRSLLA--------G----VDTIEHGSVLDD 272 (458)
T ss_dssp CCC---------------CCCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHH--------T----CSEEEECCCCCH
T ss_pred Ccc------C---CCCCCcCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc--------C----CCEEEECCCCCH
Confidence 210 0 012334789999999999999999999999877665554332 2 458999999999
Q ss_pred hhHHHHh------hCCcEEEecccc--ccc----ch------hHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC-
Q 008063 424 GTAARFG------DQGIVASMQPQH--LLD----DA------DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV- 484 (579)
Q Consensus 424 ~~~~~~~------~~~i~~~~~p~~--~~~----~~------~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~- 484 (579)
+++++++ +.|+.+ +|.. +.. .. ++.... ++.+......+++.++++|+++++|||.+.
T Consensus 273 ~~~~~~~~~~~~~~~g~~v--~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~ 349 (458)
T 2p9b_A 273 ELIGMFRHNPNALRGYSAL--IPTLSAGLPLTLLGQDVTGITDIQLEN-SKNVVGGMVSGARQAHEAGLMIGVGTDTGMT 349 (458)
T ss_dssp HHHHHHHCCTTSTTSCCEE--ECCHHHHHHHHHSCHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCCBCCCCCTTST
T ss_pred HHHHHHhcccccccCCeEE--EeecchhhHHHhhhcccccCCHHHHHH-HHHHHHHHHHHHHHHHHCCCeEEEecCCCCC
Confidence 9999999 899865 4554 211 00 011111 122222445688999999999999999643
Q ss_pred -C-CCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhc
Q 008063 485 -A-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAE 562 (579)
Q Consensus 485 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~ 562 (579)
. ..+++.+++.++.. .+++++++|+++|.|||+++|+++++|+|+|||.|||||+|.||++++..+
T Consensus 350 ~~~~~~~~~e~~~~~~~------------~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~~~~~~ 417 (458)
T 2p9b_A 350 FVPQYATWRELELLVAY------------AGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLRAL 417 (458)
T ss_dssp TSCTTCHHHHHHHHHHH------------HCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGGG
T ss_pred CCccccHHHHHHHHHHh------------cCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchhCHHHh
Confidence 1 13566666654431 258999999999999999999998899999999999999999999876655
Q ss_pred cCCeEEEEEECCEEeCC
Q 008063 563 VSASIEATYVSGVQAYP 579 (579)
Q Consensus 563 ~~~~v~~v~v~G~~v~~ 579 (579)
. +|..||++|++||.
T Consensus 418 ~--~v~~v~v~G~~v~~ 432 (458)
T 2p9b_A 418 E--HPALVIAAGHPVWR 432 (458)
T ss_dssp T--SCSEEEETTEECCS
T ss_pred c--cceEEEECCEEEec
Confidence 3 79999999999873
No 15
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=5.6e-35 Score=307.98 Aligned_cols=387 Identities=22% Similarity=0.228 Sum_probs=240.6
Q ss_pred CccEEEEcCeEEeCCCC----C-CeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcc
Q 008063 44 EADLVVTNGVIFTGDDS----L-LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQ 118 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~----~-~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~ 118 (579)
+++++|+|++++++++. . ...++|+|+||||++||+..+.+...+++.++||++|++|+|||||+|+|+...+..
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 93 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNR 93 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhh
Confidence 46799999999998652 2 357799999999999997543221112246899999999999999999998654321
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHH
Q 008063 119 MARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQL 198 (579)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~ 198 (579)
..++..++.. .+| .....
T Consensus 94 -----------~~~~~~~~~~-------------~~~------------~~~~~-------------------------- 111 (419)
T 2puz_A 94 -----------AMEFEMRLNG-------------ATY------------EEIAK-------------------------- 111 (419)
T ss_dssp -----------HHHHHHHHTT-------------CCH------------HHHHH--------------------------
T ss_pred -----------HHHHHHHhcC-------------CCH------------HHHHh--------------------------
Confidence 1122111100 000 00000
Q ss_pred cCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCcccc
Q 008063 199 VGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQL 278 (579)
Q Consensus 199 ~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~ 278 (579)
.|+.+. . .....+..++++..+.....++.++++|+|++.+.+.+ +.. ..
T Consensus 112 ----------~~gg~~-----------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~--~~~-~~ 161 (419)
T 2puz_A 112 ----------AGGGIV-----------S------SVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGY--GLD-IE 161 (419)
T ss_dssp ----------TTCSHH-----------H------HHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCS--CCS-HH
T ss_pred ----------cCCCee-----------c------chhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCC--CCC-ch
Confidence 000000 0 00011123456777777788899999999999885321 110 00
Q ss_pred chHHHHHHHHHHhhcCCCeeEEEEcc----Ccc-chhh-HHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCC
Q 008063 279 SWEDFADVYQWASYSEKMKIRVCLFF----PLE-TWSS-LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYA 352 (579)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~i~v~~~~----~~~-~~~~-~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~ 352 (579)
......+.++.+.. ..++++.... ..+ .+.. ..++...... ..+. .....++.
T Consensus 162 ~~~~~~~~~~~~~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------------~~~~~~~~ 220 (419)
T 2puz_A 162 TELKMLRVARRLET--LRPVRIVTSYLAAHATPADYKGRNADYITDVVL---PGLE----------------KAHAEGLA 220 (419)
T ss_dssp HHHHHHHHHHHHTT--TSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHH---HHHH----------------HHHHTTCC
T ss_pred hHHHHHHHHHHHhh--hcCceEEEEecccccCchhhcccHHHHHHHHHh---hhhh----------------hhhhcccc
Confidence 11122233333322 3344443211 111 1100 0111110000 0000 00000000
Q ss_pred CC-CCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchH---HHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHH
Q 008063 353 DE-PHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR---ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAAR 428 (579)
Q Consensus 353 ~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~ 428 (579)
+. ....+...++++.++++++.+++.|+++.+|+.+.. .++.. ...+ ...+.|+.+++++++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~--------~~~g----~~~~~H~~~~~~~~~~~ 288 (419)
T 2puz_A 221 DAVDGFCEGIAFSVKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELA--------ASYN----ALSADHLEYLDETGAKA 288 (419)
T ss_dssp SEECCEESTTSBCHHHHHHHHHHHHHTTCCBEEEESSSSCCSHHHHH--------HHTT----CSEEEECTTCCHHHHHH
T ss_pred cccccccCCCCcCHHHHHHHHHHHHHCCCcEEEEecccccCCHHHHH--------HhcC----CceehHhccCCHHHHHH
Confidence 00 000011225789999999999999999999997432 22211 1122 46789999999999999
Q ss_pred HhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--C-CCHHHHHHHHHcccCCCCC
Q 008063 429 FGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--D-INPLCAIRTAMKRIPPGWD 505 (579)
Q Consensus 429 ~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~-~~~~~~~~~~~~~~~~~~~ 505 (579)
+++.|+.++++|.++.. + +. ...++++.++++|+++++|||++.. + .+++..++.++..
T Consensus 289 ~~~~g~~~~~~p~~~~~--------l---~~-~~~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~------ 350 (419)
T 2puz_A 289 LAKAGTVAVLLPGAFYA--------L---RE-KQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATL------ 350 (419)
T ss_dssp HHHHTCEEEECHHHHHH--------H---TC-CCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHH------
T ss_pred HHHcCCcEEECCchhhh--------h---cc-cccccHHHHHHCCCeEEEECCCCCCCCccccHHHHHHHhccc------
Confidence 99999999999986531 1 11 3456889999999999999998642 2 5888888876642
Q ss_pred CCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC-ChhhccCCeEEEEEECCEEeCC
Q 008063 506 NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 579 (579)
Q Consensus 506 ~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~-~~~~~~~~~v~~v~v~G~~v~~ 579 (579)
.++|++++|+++|.|||+++|+++++|+|+|||.|||||||.|++. ....+...+|..||++|++|.+
T Consensus 351 ------~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 419 (419)
T 2puz_A 351 ------FRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVYRIGFNPLHARIFKGQKVSP 419 (419)
T ss_dssp ------HCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHHHCBSCCCEEEEEETTEECC-
T ss_pred ------cCCCHHHHHHHHHHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcchhhhcCCceEEEEECCEEcCC
Confidence 2489999999999999999999988999999999999999999887 3344446689999999999864
No 16
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=1.4e-34 Score=303.81 Aligned_cols=360 Identities=18% Similarity=0.188 Sum_probs=236.8
Q ss_pred CccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccc
Q 008063 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~ 123 (579)
+.+++|+|++|+++++.....++|+|+||||++|++. . +.+.++||++|++|+|||||+|+|+. ....
T Consensus 5 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~-~-----~~~~~viD~~g~~v~PGlID~H~H~~-~~~~----- 72 (408)
T 3be7_A 5 SEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI-N-----TKDATVISIPDLILIPGLMDSHVHIV-GNDS----- 72 (408)
T ss_dssp CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC-C-----CSSSEEEEEEEEEEEECEEEEEECCS-SCCC-----
T ss_pred cceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC-C-----CCCCeEEECCCCEECcCceeeeEccc-CCCC-----
Confidence 3569999999999876433338999999999999975 1 24578999999999999999999985 2110
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCC
Q 008063 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (579)
Q Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~ 203 (579)
..| ...
T Consensus 73 -----------------------------~~~---------------~~~------------------------------ 78 (408)
T 3be7_A 73 -----------------------------KGE---------------ESI------------------------------ 78 (408)
T ss_dssp -----------------------------CSG---------------GGT------------------------------
T ss_pred -----------------------------cch---------------hhh------------------------------
Confidence 000 000
Q ss_pred CCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHH
Q 008063 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (579)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~ 283 (579)
..++++.........+.++++|+|++.+++... + ..
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~----~---~~-- 114 (408)
T 3be7_A 79 -----------------------------------ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAAN----Y---AD-- 114 (408)
T ss_dssp -----------------------------------TCCTHHHHHHHHHHHHHHHTTTEEEEEECCCST----T---HH--
T ss_pred -----------------------------------cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCcc----c---cC--
Confidence 001133333445577889999999999985321 1 11
Q ss_pred HHHHHHHhhcCC-CeeEEEEccCc-------------------------cchhhHHHHHHhcCCCCCCceEEceEEEEEc
Q 008063 284 ADVYQWASYSEK-MKIRVCLFFPL-------------------------ETWSSLADLINKTGHVLSDWVYLGGVKAFAD 337 (579)
Q Consensus 284 ~~~~~~~~~~~~-~~i~v~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~d 337 (579)
..++...+.+. .+.++...... ....+..+......... ...+|++.+
T Consensus 115 -~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~ 188 (408)
T 3be7_A 115 -VSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYG-----ADLIKFCAT 188 (408)
T ss_dssp -HHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTT-----CSEEEEECB
T ss_pred -HHHHHHHHCCCCCCCEEEEccceeeccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcC-----CCEEEEEec
Confidence 12333333222 12233321100 01112222222111111 124677777
Q ss_pred CccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEee
Q 008063 338 GSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH 417 (579)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H 417 (579)
|.+..... ..+...++++.++++++.|++.|+++.+|+.+..+++..++. + ...+.|
T Consensus 189 g~~~~~~~-----------~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g----~~~i~H 245 (408)
T 3be7_A 189 GGVMSRNT-----------DVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKA--------G----VDSVEH 245 (408)
T ss_dssp CCSSSSSC-----------CTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------T----CSEEEE
T ss_pred CCcCCCCC-----------CCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------C----CCEEEE
Confidence 65432211 012344789999999999999999999999987765554431 2 358999
Q ss_pred ccCCChhhHHHHhhCCcEEEecccccccchhHH-HHhhChh---hh----hhhhhhHHHHHHCCCeeeecCCCCCCC-CC
Q 008063 418 AQHLASGTAARFGDQGIVASMQPQHLLDDADSA-RKKLGVD---RA----ERESYLFQSLLANNALLALGSDWPVAD-IN 488 (579)
Q Consensus 418 ~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~-~~~l~~~---~~----~~~~~~l~~l~~~Gi~v~~gsD~~~~~-~~ 488 (579)
+...+++.++++++.|+.+..++.......... ...+++. +. .....+++.+++.|+++++|||.+..+ .+
T Consensus 246 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p~~~ 325 (408)
T 3be7_A 246 ASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHGD 325 (408)
T ss_dssp CTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBCTTC
T ss_pred CCCCCHHHHHHHHHCCCEEeeeecHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCch
Confidence 999999999999999987765543211000000 0011111 00 023467899999999999999986533 35
Q ss_pred HHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEE
Q 008063 489 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 568 (579)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~ 568 (579)
++.+++.++. .+++++++++++|.|||+++|++ .+|+|++||.|||||+|.||++++..+. +|.
T Consensus 326 ~~~~~~~~~~-------------~gls~~~al~~~T~n~A~~lgl~-~~G~i~~G~~ADlvvld~~p~~~~~~~~--~v~ 389 (408)
T 3be7_A 326 NAKQFAYMVE-------------WGMTPLEAIQASTIKTATLFGIE-NIGQIKEGFDADIVGVIENPLANIRTLE--EVA 389 (408)
T ss_dssp GGGHHHHHHH-------------TTCCHHHHHHTTTHHHHHHHTCS-SCSSCCTTSBCCEEEESSCTTTCGGGTT--SCC
T ss_pred HHHHHHHHHH-------------cCCCHHHHHHHHHHHHHHHhCCC-cccccCCCCccCEEEECCCchhhHHHhh--cee
Confidence 5666665442 25999999999999999999999 6899999999999999999998776654 799
Q ss_pred EEEECCEEeC
Q 008063 569 ATYVSGVQAY 578 (579)
Q Consensus 569 ~v~v~G~~v~ 578 (579)
.||++|++|+
T Consensus 390 ~v~~~G~~v~ 399 (408)
T 3be7_A 390 FVMKEGKVYK 399 (408)
T ss_dssp EEEETTEEEE
T ss_pred EEEECCEEEe
Confidence 9999999986
No 17
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=6.7e-35 Score=307.61 Aligned_cols=183 Identities=15% Similarity=0.146 Sum_probs=146.9
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccc
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 442 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~ 442 (579)
++++.++++++.|++.|+++.+|+.+..... .++ .. ...+ ...+.|+.++++++++++++.++.+++||.+
T Consensus 227 ~~~e~l~~~~~~a~~~g~~v~~H~~~~~~~~-~~~---~~-~~~g----~~~~~H~~~~~~~~i~~~~~~g~~~~~~p~~ 297 (421)
T 2bb0_A 227 FTVSQSRRYLQKAAEAGFGLKIHADEIDPLG-GAE---LA-GKLK----AVSADHLVGTSDEGIKKLAEAGTIAVLLPGT 297 (421)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECSSSCCS-HHH---HH-HHTT----CSEEEECTTCCHHHHHHHHHHTCEEEECHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccccccC-HHH---HH-HHcC----CcEEhhhhcCCHHHHHHHHHcCCeEEECCch
Confidence 5789999999999999999999986432100 011 11 1123 5679999999999999999999999999987
Q ss_pred cccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC-C--CCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHH
Q 008063 443 LLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-A--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 519 (579)
Q Consensus 443 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 519 (579)
+.. +. . ....+++.++++|+++++|||++. + ..+++..++.++.. .++|+++|
T Consensus 298 ~~~--------l~---~-~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~------------~~ls~~ea 353 (421)
T 2bb0_A 298 TFY--------LG---K-STYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALH------------LKMTAEEI 353 (421)
T ss_dssp HHH--------TT---C-CCCCCHHHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHH------------SCCCHHHH
T ss_pred hhh--------hc---c-cccchHHHHHHCCCeEEEeCCCCCCCCcccCHHHHHHHHhcc------------cCCCHHHH
Confidence 641 11 1 345688999999999999999754 2 24888888877642 35999999
Q ss_pred HHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC-ChhhccCCeEEEEEECCEEeC
Q 008063 520 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 520 l~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~-~~~~~~~~~v~~v~v~G~~v~ 578 (579)
|+++|.|||+++|+++++|+|+|||.|||||+|.|++. .+..+...+|..||++|++||
T Consensus 354 l~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~~~~~~~~~~~v~~t~v~G~~v~ 413 (421)
T 2bb0_A 354 WHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIPYHYGVNHVHQVMKNGTIVV 413 (421)
T ss_dssp HHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTTHHHHSCSSCCEEEEEETTEEEE
T ss_pred HHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccccCHhHcCCCceEEEEECCEEEE
Confidence 99999999999999988999999999999999999876 334444568999999999987
No 18
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=1.6e-34 Score=304.23 Aligned_cols=384 Identities=21% Similarity=0.206 Sum_probs=242.7
Q ss_pred ccEEEEcCeEEeCCCC-----CCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccc
Q 008063 45 ADLVVTNGVIFTGDDS-----LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (579)
Q Consensus 45 ~~~likn~~v~~~~~~-----~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~ 119 (579)
|+++|+|++|+++++. ....++|+|+||||++|++..+.+.. .+.++||++|++|+|||||+|+|+..++..
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~H~~~~~~~- 81 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGP--YPAHWQDMKGKLVTPGLIDCHTHLIFAGSR- 81 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC----CCTTSEECTTCEEEECEEEEEECCCCCSCC-
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhcccc--CCCeEEeCCCCEECCcccccccCcchhhhh-
Confidence 6799999999998762 23677999999999999976442210 145789999999999999999998765431
Q ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHc
Q 008063 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (579)
Q Consensus 120 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~ 199 (579)
..++..++. |.+|. +..
T Consensus 82 ----------~~~~~~~~~-------------g~~~~-----------~~~----------------------------- 98 (416)
T 2q09_A 82 ----------AEEFELRQK-------------GVPYA-----------EIA----------------------------- 98 (416)
T ss_dssp ----------HHHHHHHHT-------------TCCHH-----------HHH-----------------------------
T ss_pred ----------HHHHHHHHh-------------cCCHH-----------Hhh-----------------------------
Confidence 111211110 00000 000
Q ss_pred CCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccc
Q 008063 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (579)
Q Consensus 200 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~ 279 (579)
+.|+.+.+ .....+..++++.........+.++++|+|++.+++.+ +.. ...
T Consensus 99 --------~~~g~~~~-----------------~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~--~~~-~~~ 150 (416)
T 2q09_A 99 --------RKGGGIIS-----------------TVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGY--GLT-LED 150 (416)
T ss_dssp --------HTTCTHHH-----------------HHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCS--CCS-HHH
T ss_pred --------hcCCcEee-----------------hhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCc--ccC-hHh
Confidence 00000000 00011234567778888888999999999999996421 111 001
Q ss_pred hHHHHHHHHHHhhcCCCeeEEEE--c--cCcc-chhh-HHHHHHhcC-CCCCCceE---EceEEEEEcCccCCCcccccC
Q 008063 280 WEDFADVYQWASYSEKMKIRVCL--F--FPLE-TWSS-LADLINKTG-HVLSDWVY---LGGVKAFADGSLGSNSALFHE 349 (579)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~i~v~~--~--~~~~-~~~~-~~~~~~~~~-~~~~~~~~---~~g~k~~~dg~~~~~~~~~~~ 349 (579)
.....+.++.+... .++++.. . ...+ .... ..++..... .....+.. ...++..
T Consensus 151 ~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 214 (416)
T 2q09_A 151 ELKMLRVARRLGEA--LPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVF-------------- 214 (416)
T ss_dssp HHHHHHHHHHHHHH--SSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEB--------------
T ss_pred HHHHHHHHHHHHhh--CCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccc--------------
Confidence 11222333333222 2344332 1 1111 1100 011111000 00000000 0000000
Q ss_pred CCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHH
Q 008063 350 PYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARF 429 (579)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~ 429 (579)
.+...++++.+.++++.|++.|+++.+|+.+...... + +.+ ...+ ...+.|+.++++++++++
T Consensus 215 --------~~~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~-~---~~~-~~~g----~~~~~H~~~~~~~~~~~~ 277 (416)
T 2q09_A 215 --------CEHIGFSLAQTEQVYLAADQYGLAVKGHMDQLSNLGG-S---TLA-ANFG----ALSVDHLEYLDPEGIQAL 277 (416)
T ss_dssp --------BSTTSBCHHHHHHHHHHHHHTTCEEEEEESSSCCCSH-H---HHH-HHTT----CSEEEECTTCCHHHHHHH
T ss_pred --------cCCCcCCHHHHHHHHHHHHHCCCcEEEEECCCCchHH-H---HHH-HHcC----CCEEeecccCCHHHHHHH
Confidence 0112257899999999999999999999975421111 1 111 1123 457999999999999999
Q ss_pred hhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC---CCCHHHHHHHHHcccCCCCCC
Q 008063 430 GDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA---DINPLCAIRTAMKRIPPGWDN 506 (579)
Q Consensus 430 ~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~---~~~~~~~~~~~~~~~~~~~~~ 506 (579)
++.++.+++||.++.. +. . ...++++.++++|+++++|||.+.. ..+++..++.++..
T Consensus 278 ~~~g~~~~~~p~~~~~--------~~---~-~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~~------- 338 (416)
T 2q09_A 278 AHRGVVATLLPTAFYF--------LK---E-TKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTL------- 338 (416)
T ss_dssp HHHTCEEEECHHHHHH--------TT---C-CCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHH-------
T ss_pred HHcCCeEEEcCccHHh--------hc---c-ccccCHHHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHHH-------
Confidence 9999999999987541 11 1 3456889999999999999998642 35888888877642
Q ss_pred CCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC-ChhhccCCeEEEEEECCEEeCC
Q 008063 507 AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 579 (579)
Q Consensus 507 ~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~-~~~~~~~~~v~~v~v~G~~v~~ 579 (579)
.+++++++|+++|.|||+++|+++++|+|+|||.|||||+|.|++. .+..+...+|..||++|++||.
T Consensus 339 -----~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 407 (416)
T 2q09_A 339 -----FGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAELSYLIGVDQLVSRVVNGEETLH 407 (416)
T ss_dssp -----HCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHHHHSCSCCCEEEEEETTEECCC
T ss_pred -----cCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEECCCchhhhhhhhccCcceEEEECCEEEEe
Confidence 3489999999999999999999988999999999999999999887 3333345689999999999974
No 19
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=1.9e-34 Score=302.19 Aligned_cols=372 Identities=16% Similarity=0.118 Sum_probs=234.5
Q ss_pred CccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccc
Q 008063 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~ 123 (579)
+++++|+|++|+++.+. ++|+|+||||++|++..+ .++.++||++|++|+|||||+|+|+...........
T Consensus 4 ~~~~li~n~~v~~~~~~----~~v~I~~g~I~~vg~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~ 74 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV----YDIGIVGDRIIKIEAKIE-----GTVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERL 74 (403)
T ss_dssp CEEEEEEEEEETTTTEE----EEEEEETTEEEEEESSCC-----SCEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSS
T ss_pred ccceEEEeeEecCCCee----EEEEEECCEEEEeecCCC-----CCccceEcCCCCEecccceeeeeccchhhccccccc
Confidence 45799999999986542 799999999999997532 123579999999999999999999965421000000
Q ss_pred c--CCC--CCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHc
Q 008063 124 L--RGV--SHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (579)
Q Consensus 124 ~--~~~--~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~ 199 (579)
. .+. .....+..++..
T Consensus 75 ~~~~g~~~~~~~~l~~~~~~------------------------------------------------------------ 94 (403)
T 2qt3_A 75 PKFWSRPYTRDAAIEDGLKY------------------------------------------------------------ 94 (403)
T ss_dssp CTTCSSCCCHHHHHHHHHHH------------------------------------------------------------
T ss_pred ccccCCCcccCcCHHHHHHH------------------------------------------------------------
Confidence 0 000 000001111100
Q ss_pred CCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccc
Q 008063 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (579)
Q Consensus 200 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~ 279 (579)
.. ..++++...........++++|+|++.++....+.. ....
T Consensus 95 ---------------------------------~~----~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~-~~~~ 136 (403)
T 2qt3_A 95 ---------------------------------YK----NATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVA-KTKA 136 (403)
T ss_dssp ---------------------------------HH----HCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTT-TTHH
T ss_pred ---------------------------------hh----hcCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCcc-ccch
Confidence 00 114567777777888999999999997653221111 0011
Q ss_pred hHHHHHHHHHHhhcCCCeeEEEEccCc--cchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCC
Q 008063 280 WEDFADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHN 357 (579)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~i~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~ 357 (579)
.....+..+.. .....+.+..+... ...++..+..+.......+.. + + + .|..
T Consensus 137 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~----~--------~-~p~~----- 191 (403)
T 2qt3_A 137 VEAVLEAKEEL--KDLIDIQVVAFAQSGFFVDLESESLIRKSLDMGCDLV-----G----G--------V-DPAT----- 191 (403)
T ss_dssp HHHHHHHHHHH--TTTCEEEEEEECTTCTTTSTTHHHHHHHHHHTTCSEE-----E----C--------B-CTTT-----
T ss_pred HHHHHHHHHHh--hcceeEEEEEcCCcccccCcchHHHHHHHHhcCCCeE-----E----E--------e-cCCC-----
Confidence 12222222222 22344444332211 111122222221111111110 0 0 0 0110
Q ss_pred CcccCCCHHHHHHHHHHHHHCCCeEEEEecchHH-HHHHHHHHHHHHHhcCCCCCCceEeeccCCCh-------hhHHHH
Q 008063 358 YGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARF 429 (579)
Q Consensus 358 ~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-------~~~~~~ 429 (579)
....+++.++++++.|+++|+++.+|+.+... ....++.+-+.....+. +.+..+.|+..+++ ++++++
T Consensus 192 --~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l 268 (403)
T 2qt3_A 192 --RENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYSINRLAQKTIENGY-KGRVTTSHAWCFADAPSEWLDEAIPLY 268 (403)
T ss_dssp --TTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHHHHHHHTTC-TTSEEEEECTHHHHSCHHHHHHHHHHH
T ss_pred --CCCChHHHHHHHHHHHHHcCCCeEEEeCCcccchhHHHHHHHHHHHHcCC-CCCeEEEehhhhccCChhhHHHHHHHH
Confidence 11245689999999999999999999986533 22333322222334554 56889999998875 799999
Q ss_pred hhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC------CCCHHHHHHHHHcccCCC
Q 008063 430 GDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA------DINPLCAIRTAMKRIPPG 503 (579)
Q Consensus 430 ~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~------~~~~~~~~~~~~~~~~~~ 503 (579)
++.|+.+++||... ....+++.++++|+++++|||++.. ..+++..++.+.....
T Consensus 269 ~~~g~~v~~~p~~~-----------------~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~-- 329 (403)
T 2qt3_A 269 KDSGMKFVTCFSST-----------------PPTMPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLE-- 329 (403)
T ss_dssp HHHTCEEEEETTTC-----------------CTTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTT--
T ss_pred HHcCCEEEECCCCC-----------------CCCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhC--
Confidence 99999999999632 3355789999999999999998632 2477877776653221
Q ss_pred CCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCC-CCChhhccCCeEEEEEECCEEeC
Q 008063 504 WDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS-WEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 504 ~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~-~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
...+++++++|+++|.|||+++|+++ .|+|++||.|||||+|.++ ++.+.. ..+|..||++|++||
T Consensus 330 ------~~~~~~~~~al~~~T~~~A~~lg~~~-~g~i~~G~~ADlvv~d~~~~~~~~~~--~~~v~~v~v~G~~v~ 396 (403)
T 2qt3_A 330 ------LKTNRDLGLIWKMITSEGARVLGIEK-NYGIEVGKKADLVVLNSLSPQWAIID--QAKRLCVIKNGRIIV 396 (403)
T ss_dssp ------CCSHHHHHHHHHHTTHHHHHHHTCGG-GCSSSTTSBCCEEEESSSSHHHHHHH--CCCEEEEEETTEEEE
T ss_pred ------cCCccCHHHHHHHHHHHHHHhcCCCc-ccCCCCCCcCCEEEEcCCChHHHhhc--CCCccEEEECCEEEe
Confidence 01237999999999999999999987 4999999999999999986 543221 458999999999986
No 20
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.4e-34 Score=309.70 Aligned_cols=204 Identities=19% Similarity=0.193 Sum_probs=156.7
Q ss_pred CCCHHHHHHHHHHHHHC-CCeEEEEecch-HHHHHHHHH------HHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCC
Q 008063 362 VMELESLLSMTMASDKS-GLQVAIHAIGD-RANDLVLDM------YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG 433 (579)
Q Consensus 362 ~~~~~~l~~~~~~a~~~-g~~i~iH~~g~-~~~~~~~~~------~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~ 433 (579)
.++++.++++++.+++. |+++++|+.+. .++....+. ........+..+.+..+.|+.++++++++++++.|
T Consensus 210 ~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g 289 (475)
T 2ood_A 210 GASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKG 289 (475)
T ss_dssp GCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcC
Confidence 36889999999999999 99999999865 334444432 12233444556677889999999999999999999
Q ss_pred cEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCe--eeecCCCCC-CCCCHHHHHHHHHcccC-----CCCC
Q 008063 434 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL--LALGSDWPV-ADINPLCAIRTAMKRIP-----PGWD 505 (579)
Q Consensus 434 i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~--v~~gsD~~~-~~~~~~~~~~~~~~~~~-----~~~~ 505 (579)
+.+++||.++. .++ ...++++.+++.|++ +++|||.+. .+.+++.+++.++.+.. ..+.
T Consensus 290 ~~~~~~P~~~~--------~l~-----~~~~~~~~~~~~Gv~~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (475)
T 2ood_A 290 AAVVFCPCSNL--------FLG-----SGLFRLGRATDPEHRVKMSFGTDVGGGNRFSMISVLDDAYKVGMCNNTLLDGS 356 (475)
T ss_dssp CEEEECHHHHH--------HTT-----CCCCCHHHHTCTTSCCEEEECCCBTTBSCCCHHHHHHHHHHHHHHHHHHSSSS
T ss_pred CEEEEChhhhh--------hcc-----cCcCCHHHHHhCCCCCcEEEEccCCCCCCcCHHHHHHHHHHHhcccchhccCC
Confidence 99999998753 233 456689999999999 999999865 45788988888754311 0000
Q ss_pred -----CCC--CCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCC--hhh---------------
Q 008063 506 -----NAW--IPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWED--FAA--------------- 561 (579)
Q Consensus 506 -----~~~--~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~--~~~--------------- 561 (579)
..+ ..+.+++++++|+++|.|||+++|+++++|+|+|||.|||||+|.|++.. ...
T Consensus 357 ~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~s~~~~~~ 436 (475)
T 2ood_A 357 IDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQLAQPWHQSLIADGAGPRTVDE 436 (475)
T ss_dssp SCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSSTTHHHHHTTC--CCSCCSHHH
T ss_pred cccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCccccccccccccccccccccccc
Confidence 000 00257999999999999999999999889999999999999999998652 211
Q ss_pred c-----------cCCeEEEEEECCEEeC
Q 008063 562 E-----------VSASIEATYVSGVQAY 578 (579)
Q Consensus 562 ~-----------~~~~v~~v~v~G~~v~ 578 (579)
+ ...+|..||++|++||
T Consensus 437 ~~~p~~~~~~~~~~~~V~~t~v~G~~v~ 464 (475)
T 2ood_A 437 AASMLFAVMMVGDDRCVDETWVMGKRLY 464 (475)
T ss_dssp HHHHHHHHHHHCCGGGEEEEEETTEEEE
T ss_pred hhhHHHHHHhhCCCCCeeEEEECCEEEE
Confidence 1 2468999999999997
No 21
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=8.8e-34 Score=300.70 Aligned_cols=383 Identities=17% Similarity=0.187 Sum_probs=242.8
Q ss_pred CCccEEEEcCeEEeCCC---CCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccc
Q 008063 43 LEADLVVTNGVIFTGDD---SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (579)
Q Consensus 43 ~~~~~likn~~v~~~~~---~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~ 119 (579)
.+.+++|+|++|+++++ ....+++|+|+||||++|++..... .++.++||++|++|+|||||+|+|+.....
T Consensus 7 ~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~~viD~~G~~v~PGlID~H~H~~~~~~-- 81 (439)
T 2i9u_A 7 DINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDK---YKGNPIIDFRNNIIIPGMNDLHAHASQYKN-- 81 (439)
T ss_dssp --CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGG---GTTSCEEEEEEEEEEECEEEEEEEGGGGGG--
T ss_pred CcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEeccccccc---CCCceEEcCCCeEEEecceecccccchHhh--
Confidence 45679999999999862 2236789999999999998642211 135689999999999999999999975421
Q ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhh-CCCCeEEEEeCCCchhhhcHHHHHH
Q 008063 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDI-TPHNPVWLSRMDGHMGLANSVALQL 198 (579)
Q Consensus 120 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~-~~~~p~~~~~~~~~~~~~n~~~~~~ 198 (579)
+|... +.+...|+... +|
T Consensus 82 -----~g~~~---------------------------------~~~~~~~~~~~~~p----------------------- 100 (439)
T 2i9u_A 82 -----LGIGM---------------------------------DKELLPWLNNYTFP----------------------- 100 (439)
T ss_dssp -----TTCCC---------------------------------SSCHHHHHHHTHHH-----------------------
T ss_pred -----hCCcC---------------------------------CCCHHHHHHhcccc-----------------------
Confidence 01000 01111222110 00
Q ss_pred cCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCcccc
Q 008063 199 VGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQL 278 (579)
Q Consensus 199 ~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~ 278 (579)
....+ .++++.........+.+++.|+|++.+++..
T Consensus 101 ----------------------------------~~~~~--~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-------- 136 (439)
T 2i9u_A 101 ----------------------------------EEAKF--LNVDYAKKTYGRLIKDLIKNGTTRVALFATL-------- 136 (439)
T ss_dssp ----------------------------------HHHGG--GSHHHHHHHHHHHHHHHHHTTEEEEEEECCS--------
T ss_pred ----------------------------------hhhcc--CCHHHHHHHHHHHHHHHHhcCceEEEEcccc--------
Confidence 00000 1335666666777889999999999996421
Q ss_pred chHHHHHHHHHHhhcCCCeeEEEEc---cC--cc-----c----hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCc
Q 008063 279 SWEDFADVYQWASYSEKMKIRVCLF---FP--LE-----T----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNS 344 (579)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~i~v~~~---~~--~~-----~----~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~ 344 (579)
..+.....++.+.+.+ +++... .. .+ . ..+..++.+.... ... .+++..
T Consensus 137 ~~~~~~~~~~~~~~~g---~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~i~~~~-------- 199 (439)
T 2i9u_A 137 HKDSTIELFNMLIKSG---IGAYVGKVNMDYNCPDYLTENYITSLNDTEEIILKYKD-KSN-----IVKPII-------- 199 (439)
T ss_dssp CHHHHHHHHHHHHHHT---CEEEEECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTT-TCS-----SEEECB--------
T ss_pred ccchHHHHHHHHHHcC---CEEEEEeeeccccCCcccchhHHHHHHHHHHHHHHHhC-CCC-----ceEEEE--------
Confidence 1112233444333322 332211 10 01 0 1111222221100 001 122110
Q ss_pred ccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHH------HHHHHhcCCCC-CCceEe
Q 008063 345 ALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMY------KSVVVTTGKRD-QRFRIE 416 (579)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~------~~~~~~~~~~~-~~~~i~ 416 (579)
.|. ....++++.++++++.|++.|+++.+|+.+. .+.+..++.+ .+.....+..+ .+..+.
T Consensus 200 ----~~~-------~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~ 268 (439)
T 2i9u_A 200 ----TPR-------FVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMA 268 (439)
T ss_dssp ----EEC-------CGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEE
T ss_pred ----ecC-------CcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEE
Confidence 010 0123678999999999999999999999864 4455444421 12234456555 678899
Q ss_pred eccCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC-CCCCHHHHHHH
Q 008063 417 HAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRT 495 (579)
Q Consensus 417 H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~-~~~~~~~~~~~ 495 (579)
|+.++++++++++++.|+.+++||.++. .++ ...++++.++++|+++++|||.+. ...+++.+++.
T Consensus 269 H~~~~~~~~~~~l~~~g~~~~~~p~~~~--------~l~-----~~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~ 335 (439)
T 2i9u_A 269 HCIHSSKEEINLIKRNNVTIVHCPTSNF--------NLG-----SGMMPVRKYLNLGINVVLGSDISAGHTCSLFKVIAY 335 (439)
T ss_dssp ECCSCCHHHHHHHHHTTCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCBTTBCCSCHHHHHHH
T ss_pred EEecCCHHHHHHHHHcCCEEEECccchh--------hcc-----cccCCHHHHHHCCCcEEEecCCCCCCCcCHHHHHHH
Confidence 9999999999999999999999998753 222 345688999999999999999865 34688888877
Q ss_pred HHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCCh--------hhc----c
Q 008063 496 AMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF--------AAE----V 563 (579)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~--------~~~----~ 563 (579)
++...............+++++++|+++|.|||+++| ++|+|+|||.|||||+|.+++... ..+ .
T Consensus 336 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg---~~Gsl~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~ 412 (439)
T 2i9u_A 336 AIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDSNLYPEDYDLTERLERFIYLGD 412 (439)
T ss_dssp HHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTS---SCSSCSTTCBCCEEEECCTTSCGGGSCHHHHHHHHHHHCC
T ss_pred HHHHhccccccccCCCCCCCHHHHHHHHHHHHHHHhc---cCCccCCCCccCEEEEeCCCccccCCCccCHHHHheecCC
Confidence 6632100000001134579999999999999999999 389999999999999999975421 211 1
Q ss_pred CCeEEEEEECCEEeCC
Q 008063 564 SASIEATYVSGVQAYP 579 (579)
Q Consensus 564 ~~~v~~v~v~G~~v~~ 579 (579)
..+|..||++|++||.
T Consensus 413 ~~~v~~v~v~G~~v~~ 428 (439)
T 2i9u_A 413 DRNIMKRYVCGNEIFG 428 (439)
T ss_dssp GGGEEEEEETTEEEC-
T ss_pred CCCeeEEEECCEEEee
Confidence 3489999999999974
No 22
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=4.9e-35 Score=309.48 Aligned_cols=386 Identities=14% Similarity=0.153 Sum_probs=241.9
Q ss_pred CccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccc
Q 008063 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~ 123 (579)
+++++|+|++|++++ ..++|+|+||||++|++..+.+ .++.++||++|++|+|||||+|+|+......
T Consensus 7 ~~~~li~n~~v~~~~----~~~~v~I~~g~I~~vg~~~~~~---~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~----- 74 (430)
T 1ra0_A 7 NALQTIINARLPGEE----GLWQIHLQDGKISAIDAQSGVM---PITENSLDAEQGLVIPPFVEPHIHLDTTQTA----- 74 (430)
T ss_dssp -CCCEEEEEBCTTCC----SEEEEEEETTEEEEEEEESSCC---CCCTTEEECTTCEEESCEEEEEECTTTTTCT-----
T ss_pred CCcEEEEeeEecCCC----ceeEEEEECCEEEEeecCCCCC---CCCcceEccCCCEecccccccccchhhhhhc-----
Confidence 457999999999864 5679999999999999754321 1456899999999999999999998653210
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCC
Q 008063 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (579)
Q Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~ 203 (579)
+... +....+...|+..
T Consensus 75 --~~~~------------------------------~~~~~~~~~~l~~------------------------------- 91 (430)
T 1ra0_A 75 --GQPN------------------------------WNQSGTLFEGIER------------------------------- 91 (430)
T ss_dssp --TSSS------------------------------CCSSCCHHHHHHH-------------------------------
T ss_pred --CCCc------------------------------CCCCCCHHHHHHH-------------------------------
Confidence 0000 0000011112111
Q ss_pred CCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHH
Q 008063 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (579)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~ 283 (579)
+....+..++++.+.....+...++++|+|++.+++..... ....+...
T Consensus 92 -----------------------------~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~ 140 (430)
T 1ra0_A 92 -----------------------------WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDA--TLTALKAM 140 (430)
T ss_dssp -----------------------------HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCST--TCHHHHHH
T ss_pred -----------------------------hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCCh--HHHHHHHH
Confidence 01112345567888888889999999999999997532110 01112222
Q ss_pred HHHHHHHhhcCCCeeEEEEccCccc--hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCccc
Q 008063 284 ADVYQWASYSEKMKIRVCLFFPLET--WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQ 361 (579)
Q Consensus 284 ~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~ 361 (579)
.+..+.+ ...+.+.+..+..... .++..+.......... ++ +.. ....++. .
T Consensus 141 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~-------~~~---~~~~~~~--------~ 194 (430)
T 1ra0_A 141 LEVKQEV--APWIDLQIVAFPQEGILSYPNGEALLEEALRLGA------DV-------VGA---IPHFEFT--------R 194 (430)
T ss_dssp HHHHHHH--TTTCEEEEEEECTTCSSSSTTHHHHHHHHHHTTC------SE-------ECC---CGGGSSS--------H
T ss_pred HHHHHhh--hhhEEEEEEecCCcccccCchHHHHHHHHHHhCC------Ce-------Eee---eeccccc--------c
Confidence 2221111 2333333322211000 1111111111000000 01 000 0111110 0
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChh-------hHHHHhhCC
Q 008063 362 VMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASG-------TAARFGDQG 433 (579)
Q Consensus 362 ~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~-------~~~~~~~~~ 433 (579)
.++++.++++++.|++.|+++.+|+.+. .+....++.+.+.....+. +.+..+.|+.+++++ +++++++.|
T Consensus 195 ~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~g 273 (430)
T 1ra0_A 195 EYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSG 273 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHHHHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcC
Confidence 1467899999999999999999999753 3333333333344444454 667899999998875 899999999
Q ss_pred cEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC------CCCCHHHHHHHHHcccCCCCCCC
Q 008063 434 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNA 507 (579)
Q Consensus 434 i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~------~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
+.+++||.++...... ..+..+. +...+++.++++|+++++|||++. ...+++.+++.++.+...
T Consensus 274 v~v~~~p~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 344 (430)
T 1ra0_A 274 INFVANPLVNIHLQGR---FDTYPKR-RGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQL----- 344 (430)
T ss_dssp CEEEECHHHHHHHTTT---TCCSSCC-CCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTTC-----
T ss_pred CEEEECchhhhhhccc---cCCCCCc-CCCCCHHHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHHHHHHHcc-----
Confidence 9999999765421110 0111111 345678999999999999999853 336889998877653321
Q ss_pred CCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC-ChhhccCCeEEEEEECCEEeC
Q 008063 508 WIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 508 ~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~-~~~~~~~~~v~~v~v~G~~v~ 578 (579)
..+++++++|+++|.|||+++|+++ |+|+|||.|||||+|.++.. .+. ...+|..||++|++||
T Consensus 345 ---~~~~~~~~al~~~T~~~A~~lg~~~--G~i~~G~~ADlvv~d~~~~~~~~~--~~~~v~~v~~~G~~v~ 409 (430)
T 1ra0_A 345 ---MGYGQINDGLNLITHHSARTLNLQD--YGIAAGNSANLIILPAENGFDALR--RQVPVRYSVRGGKVIA 409 (430)
T ss_dssp ---CSHHHHHGGGGGGTHHHHHHTTCSS--CSSCTTSBCCEEEESSSSHHHHHH--HTCCCSEEEETTEEEE
T ss_pred ---CCcccHHHHHHHHHHHHHHHhCCCC--cccCCCCcCCEEEEcCCChhHHHh--ccCcceEEEECCEEEe
Confidence 1236999999999999999999986 99999999999999987533 221 2458999999999986
No 23
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=7.9e-34 Score=302.73 Aligned_cols=197 Identities=18% Similarity=0.152 Sum_probs=154.2
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEec-chHHHHHHHHHHH----HHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEE
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVAS 437 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~ 437 (579)
++++.++++++.|+ |+++++|+. +..++....+.+. +.....+..+.+..+.|+.++++++++++++.++.++
T Consensus 221 ~~~~~l~~~~~~a~--g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~ 298 (458)
T 4f0l_A 221 VTPDELDSVTQLLP--DAPVHIHVAEQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAG 298 (458)
T ss_dssp SCHHHHHHHTTSST--TSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHhc--CCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEE
Confidence 68899999999888 999999998 4455666555442 2344456677899999999999999999999999999
Q ss_pred ecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCCCHHHHHHHHHcc--cCCCCCCCCCCCCCCC
Q 008063 438 MQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKR--IPPGWDNAWIPSERIS 515 (579)
Q Consensus 438 ~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ls 515 (579)
+||.++. .++ ....+++.++++|+++++|||. ....+++.+++.+... ........+....+++
T Consensus 299 ~~p~s~~--------~l~-----~~~~~~~~~~~~Gv~v~lgtD~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (458)
T 4f0l_A 299 LCPVTEA--------NLG-----DGTFNATEFAAAGGKFGIGSDS-NVLIGIGDELRQLEYSQRLYHRARNVLAANEGST 364 (458)
T ss_dssp ECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCBT-TSSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBH
T ss_pred ECccccc--------ccc-----CCCccHHHHHHCCCeEEEECCC-CCCCCHHHHHHHHHHHHhhhccCccccCCcccCC
Confidence 9998764 233 4466899999999999999995 3557899888876532 1111111223455799
Q ss_pred HHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC--Chhhc--------cCCeEEEEEECCEEeC
Q 008063 516 LTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE--------VSASIEATYVSGVQAY 578 (579)
Q Consensus 516 ~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~--~~~~~--------~~~~v~~v~v~G~~v~ 578 (579)
++++|+++|.|||++||++ +|+|++||.|||||+|.++.. +..+. .. +|..||++|++||
T Consensus 365 ~~~~l~~~T~~~A~~lg~~--~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~-~v~~v~v~G~~v~ 434 (458)
T 4f0l_A 365 GRALFDGAVLGGNIAMGRP--EDGLKKGASADFVSLDVERLPHAKGDVVLDGWIFAGRA-HVCDVWVRGVKQV 434 (458)
T ss_dssp HHHHHHHHHHHHHHHTTCT--TCSSSTTSBCCEEEEECTTSTTCCHHHHHHHHHHTSCC-EEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHhCCC--CCcCCCCCcCCEEEEeCCCCccCCcccHHHhCeEcCCC-CceEEEECCEEEE
Confidence 9999999999999999993 799999999999999998754 22211 14 8999999999987
No 24
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=7.7e-33 Score=295.68 Aligned_cols=388 Identities=18% Similarity=0.210 Sum_probs=236.1
Q ss_pred cCCCccEEEEcCeEE-eCCC--CCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCc
Q 008063 41 TNLEADLVVTNGVIF-TGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (579)
Q Consensus 41 ~~~~~~~likn~~v~-~~~~--~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~ 117 (579)
...+.+++|||++|+ ++++ ...++++|+|+||||++||+..+.+ +.+.++||++|++|+|||||+|+|+++...
T Consensus 25 ~~~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~---~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~ 101 (479)
T 3hpa_A 25 SSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP---ETADEVLDLRGHLVIPGLVNTHHHMYQSLT 101 (479)
T ss_dssp ----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC---SCCSEEEECTTEEEEECEEECCCCGGGGGS
T ss_pred CCCCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCC---CCCCeEEECCCCEEeeCceeHhhCcchhcc
Confidence 445678999999966 4443 3447889999999999999877654 256789999999999999999999865432
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHH
Q 008063 118 QMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQ 197 (579)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~ 197 (579)
.. ....... +...|+...
T Consensus 102 ~g--~~~~~~~------------------------------------~~~~~l~~~------------------------ 119 (479)
T 3hpa_A 102 RA--VPAAQNA------------------------------------ELFGWLTNL------------------------ 119 (479)
T ss_dssp CS--CTTTTTC------------------------------------CHHHHHHHH------------------------
T ss_pred cc--cccCCCc------------------------------------chHHHHhhh------------------------
Confidence 10 0000001 111111110
Q ss_pred HcCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccc
Q 008063 198 LVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQ 277 (579)
Q Consensus 198 ~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~ 277 (579)
.........++...........+++.|+|++.+.........
T Consensus 120 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-- 161 (479)
T 3hpa_A 120 ------------------------------------YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGS-- 161 (479)
T ss_dssp ------------------------------------HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTC--
T ss_pred ------------------------------------hhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchh--
Confidence 001122334566667777888899999999998754322221
Q ss_pred cchHHHHHHHHHHhhcCCCeeEEEEc-cCccc-------------hh----hHHHHHHhcCCCCCCceEEceEEEEEcCc
Q 008063 278 LSWEDFADVYQWASYSEKMKIRVCLF-FPLET-------------WS----SLADLINKTGHVLSDWVYLGGVKAFADGS 339 (579)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~i~v~~~-~~~~~-------------~~----~~~~~~~~~~~~~~~~~~~~g~k~~~dg~ 339 (579)
.... ........+ +....... ..... .. .....................
T Consensus 162 -~~~~---~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 228 (479)
T 3hpa_A 162 -RLDD---SIGAAQRIG-MRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVV-------- 228 (479)
T ss_dssp -CHHH---HHHHHHHHT-CEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEE--------
T ss_pred -hHHH---HHHHHHHhc-chhhhhhheeeccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeE--------
Confidence 1222 222222211 11111110 00000 00 000000000000000000000
Q ss_pred cCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHH----HHHHHhcCCCCCCce
Q 008063 340 LGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFR 414 (579)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~----~~~~~~~~~~~~~~~ 414 (579)
..... ....+.+.+.++...+.+.|+++.+|+... .+........ .......+....+..
T Consensus 229 -----~~~~~----------~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 293 (479)
T 3hpa_A 229 -----VAPCS----------PFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVW 293 (479)
T ss_dssp -----EEESC----------TTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEE
T ss_pred -----ecccc----------cccCCHHHHHHHHHHHHhcCCeEEeecccchHHHHHHHHHcCCchHHHHhhhccccccce
Confidence 00011 122678899999999999999999998643 2222222211 123344566677889
Q ss_pred EeeccCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC--CCHHHH
Q 008063 415 IEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INPLCA 492 (579)
Q Consensus 415 i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~--~~~~~~ 492 (579)
+.|+.++.+.+.+++++.+.....+|.+... .. ....+.+.+.+.|+++++|||..... ...+..
T Consensus 294 ~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~~-----~~~~~~~~~~~~~~~v~~gtD~~~~~~~~~~~~~ 360 (479)
T 3hpa_A 294 HAHCVQLDDAGIGLFARTGTGVAHCPCSNMR--------LA-----SGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAE 360 (479)
T ss_dssp EEECTTCCHHHHHHHHHHTCEEEECHHHHHH--------TT-----CCCCCHHHHHHHTCCEEECCCCTTSSCCCCHHHH
T ss_pred eeeeEecchhHHHHHHhcCCceeeccccccc--------cc-----cCccchhHHHhcCCcEEeeccccccCCCccHHHH
Confidence 9999999999999999999999999886541 11 44557889999999999999976543 444444
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCC------CCCh-hhc---
Q 008063 493 IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS------WEDF-AAE--- 562 (579)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~------~~~~-~~~--- 562 (579)
.+.+..... ......++|++++|+++|.|||++||+++ +|+|+|||.|||||||.+. +.++ .++
T Consensus 361 ~~~~~~~~~-----~~~~~~~ls~~eal~~~T~~~A~~lgl~~-~G~I~~G~~ADlvv~D~~~~~~~~~~~dp~~~lv~~ 434 (479)
T 3hpa_A 361 VRQALLLQR-----VGFGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFC 434 (479)
T ss_dssp HHHHHHHHH-----HHHCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTTCTTSHHHHHHHS
T ss_pred HHHHHHHHh-----hhccccCCCHHHHHHHHHHHHHHHhCCCC-CccCCCCCcCCEEEEcCCCccccCCccCHHHHhhcc
Confidence 433321100 00134569999999999999999999975 8999999999999999773 3322 222
Q ss_pred cCCeEEEEEECCEEeC
Q 008063 563 VSASIEATYVSGVQAY 578 (579)
Q Consensus 563 ~~~~v~~v~v~G~~v~ 578 (579)
...+|.+||||||+||
T Consensus 435 ~~~~v~~tiV~G~~V~ 450 (479)
T 3hpa_A 435 APSQTAYTVVNGKVVV 450 (479)
T ss_dssp SCCCCSEEEETTEEEE
T ss_pred CCCCceEEEECCEEEE
Confidence 1458999999999997
No 25
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=1.2e-33 Score=298.11 Aligned_cols=366 Identities=14% Similarity=0.152 Sum_probs=240.9
Q ss_pred EEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccccCC
Q 008063 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (579)
Q Consensus 47 ~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~~~ 126 (579)
++|+|++|+++++ ..++++|+| ||||++||+..+.+.. .++.++||++|++|+|||||+|+|+.+.... +
T Consensus 2 ~~i~~~~v~~~~~-~~~~~~v~i-~g~I~~Vg~~~~~~~~-~~~~~vid~~g~~v~PGlId~H~H~~~~~~r-------g 71 (427)
T 3v7p_A 2 RIIKPFAILTPQT-IIQDKAVAF-DKKIEAIDTVENLIKK-YPNAAVEHDENSLLLPGFANPHLHLEFSANK-------A 71 (427)
T ss_dssp EEEEEEEEECSSS-EEESCEEEE-SSBEEEEECHHHHHHH-CTTSEEEEEEEEEEEECEEEEEECGGGTTCS-------S
T ss_pred EEEECCEEEcCCC-EEeCcEEEE-CCEEEEecChhhhccc-cCCceEEeCCCCEEecCEeecccCcchhhcc-------c
Confidence 5899999999987 557889999 9999999998766432 2567899999999999999999999765432 1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCCCC
Q 008063 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (579)
Q Consensus 127 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~~~ 206 (579)
.....++..++...... .
T Consensus 72 ~~~~~~l~~wl~~~~~~--------------------------~------------------------------------ 89 (427)
T 3v7p_A 72 TLQYGDFIPWLYSVIRH--------------------------R------------------------------------ 89 (427)
T ss_dssp CSCCSSHHHHHHHHHHH--------------------------H------------------------------------
T ss_pred ccccCCHHHHHHHHHHh--------------------------H------------------------------------
Confidence 11111122222222100 0
Q ss_pred CCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHHHH
Q 008063 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (579)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~~~ 286 (579)
...++++.+.....+...++++|+|++.++.... ..
T Consensus 90 -------------------------------~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~----------~~--- 125 (427)
T 3v7p_A 90 -------------------------------EDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYG----------ED--- 125 (427)
T ss_dssp -------------------------------HHHHHHSCHHHHHHHHHHHHHTTEEEEEEEESSS----------TT---
T ss_pred -------------------------------HhcCHHHHHHHHHHHHHHHHHhCCEEEEEecCcH----------HH---
Confidence 0011133455667788889999999999975320 11
Q ss_pred HHHHhhcCCCeeEEEEccCc----c-chh----hHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCC
Q 008063 287 YQWASYSEKMKIRVCLFFPL----E-TWS----SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHN 357 (579)
Q Consensus 287 ~~~~~~~~~~~i~v~~~~~~----~-~~~----~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~ 357 (579)
.+...+ .+++....... . ... +..+............+ +.. ...+.++.
T Consensus 126 ~~a~~~---~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~~---------~~~~~~~~----- 183 (427)
T 3v7p_A 126 LQACID---SALKVVYFNEVIGSNAATADVMYASFLERFHQSKKHENERF-----KAA---------VAIHSPYS----- 183 (427)
T ss_dssp HHHHHH---BSSEEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTCBTTE-----EEE---------EEECCTTT-----
T ss_pred HHHHHh---cCCeEEEeccccCCChhhhhHHHHHHHHHHHHhhhccCCce-----EEE---------EecCCCCc-----
Confidence 122222 23444432111 1 111 11111111111111111 111 11223333
Q ss_pred CcccCCCHHHHHHHHHHHHHCCCeEEEEecchHH-HHHHHHHHH-------H----------HHHhcCC-CCCCceEeec
Q 008063 358 YGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-NDLVLDMYK-------S----------VVVTTGK-RDQRFRIEHA 418 (579)
Q Consensus 358 ~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~-~~~~~~~~~-------~----------~~~~~~~-~~~~~~i~H~ 418 (579)
++++.++++++.|+++|+++++|+.+... ...+.+.+. . .....+. .+.+..+.|+
T Consensus 184 -----~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~ 258 (427)
T 3v7p_A 184 -----VHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHM 258 (427)
T ss_dssp -----BCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEEC
T ss_pred -----CCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCCCcccCHHHHHhhhcCCCEEEEEC
Confidence 68999999999999999999999986543 333322110 0 0010112 4568889999
Q ss_pred cCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHH
Q 008063 419 QHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTA 496 (579)
Q Consensus 419 ~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~ 496 (579)
.++++++++++++.++.+++||.++. .++ ...++++.+ +|+++++|||++.+ +.+++.+++.+
T Consensus 259 ~~~~~~~~~~l~~~g~~~~~~p~s~~--------~~~-----~~~~~~~~~--~Gv~v~lgtD~~~~~~~~~~~~~~~~a 323 (427)
T 3v7p_A 259 VWANEEEIQTIASYNAHIIHCPISNR--------LLG-----NGVLDLEKI--KSIPYAIATDGLSSNYSLNMYEELKAA 323 (427)
T ss_dssp TTCCHHHHHHHHHSEEEEEECHHHHH--------HTT-----CCCCCTTTT--TTSCEEECCCCTTSCSCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCEEEECHHHHH--------Hhc-----CCCCCHHHH--CCCeEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999875 233 334567777 99999999996543 58999999988
Q ss_pred HcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC-Chhh------ccCCeEEE
Q 008063 497 MKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAA------EVSASIEA 569 (579)
Q Consensus 497 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~-~~~~------~~~~~v~~ 569 (579)
+.+... ....++++++++++|.|||+++|++ +|+|++|+.|||||+|.+... .+.+ ....+|..
T Consensus 324 ~~~~~~-------~~~~~~~~~~~~~~t~~~a~~~g~~--~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~~~~v~~ 394 (427)
T 3v7p_A 324 LFVHPN-------KEATTFAKELIIRATKAGYDALGFE--GGEIAVGKDADMQLIDLPEGLTNVEDLYLHVILHTTKPKK 394 (427)
T ss_dssp HHHSTT-------SCHHHHHHHHHHHHTHHHHHHHTCS--CSSCCTTSBCCEEEEECCTTCCCGGGHHHHHHHHCSSCSE
T ss_pred HHhccC-------CCcccCHHHHHHHHHHHHHHHhCCC--CceeCCCCccCEEEEcCCCccCCCccchHHHhcccCCccE
Confidence 764321 2234678999999999999999997 799999999999999988643 2111 12568999
Q ss_pred EEECCEEeCC
Q 008063 570 TYVSGVQAYP 579 (579)
Q Consensus 570 v~v~G~~v~~ 579 (579)
||++|++||.
T Consensus 395 v~v~G~~v~~ 404 (427)
T 3v7p_A 395 VYIQGEEHVR 404 (427)
T ss_dssp EEETTEEEEC
T ss_pred EEECCEEEEE
Confidence 9999999873
No 26
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=100.00 E-value=8.5e-33 Score=294.09 Aligned_cols=200 Identities=19% Similarity=0.187 Sum_probs=156.2
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEec-chHHHHHHHHHHH----HHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEE
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVAS 437 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~ 437 (579)
++++.++++++.|+ .|+++++|+. +..++...++.+. +.....+..+.++.+.|+.++++++++++++.|+.++
T Consensus 211 ~~~e~l~~~~~~A~-~g~~v~~H~~e~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~ 289 (453)
T 3mdu_A 211 VTPQQIATVLAAGH-DDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAG 289 (453)
T ss_dssp SCHHHHHHHHTSSC-TTSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHHh-cCCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEE
Confidence 78999999999999 9999999987 4456666665543 2345567778899999999999999999999999999
Q ss_pred ecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCCCHHHHHHHHHcc--cC-CCCCCCCCCCCCC
Q 008063 438 MQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKR--IP-PGWDNAWIPSERI 514 (579)
Q Consensus 438 ~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~l 514 (579)
+||.++. .++ ...+|++.++++|+++++|||++ .+.+++.+++.+... .. ......+....++
T Consensus 290 ~~P~sn~--------~lg-----~g~~p~~~~~~~Gv~v~lgtD~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (453)
T 3mdu_A 290 LCLSTEA--------NLG-----DGIFPATDFLAQGGRLGIGSDSH-VSLSVVEELRWLEYGQRLRDRKRNRLYRDDQPM 355 (453)
T ss_dssp ECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCBTC-SCCCHHHHHHHHHHHHHHHHTCSCCSCBTTBCC
T ss_pred ECchhHh--------hcC-----CCCCCHHHHHHCCCEEEEECCCC-CCCCHHHHHHHHHHHHhhhccCCccccCcccCC
Confidence 9998764 334 45668999999999999999974 357888888877531 11 0111122334579
Q ss_pred CHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC----Chhhcc--------CCeEEEEEECCEEeCC
Q 008063 515 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFAAEV--------SASIEATYVSGVQAYP 579 (579)
Q Consensus 515 s~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~----~~~~~~--------~~~v~~v~v~G~~v~~ 579 (579)
+++++++++|.|||+++|+ .+|+|++||.|||||+|.+... +..++. ..+|..||++|++||.
T Consensus 356 ~~~~~~~~~t~~~a~~~~~--~~G~l~~G~~AD~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 430 (453)
T 3mdu_A 356 IGRTLYDAALAGGAQALGQ--PIGSLAVGRRADLLVLDGNDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVR 430 (453)
T ss_dssp HHHHHHHHHHHHHHHHHTS--SCSSCCTTSBCCEEEECTTCHHHHTCCHHHHHHHHHHHCCGGGEEEEEETTEEEEB
T ss_pred CHHHHHHHHHHHHHHHhCC--CCCccCCCCcCCEEEEeCCCccccCCCccChHHHheeeCCCCCeeEEEECCEEEEE
Confidence 9999999999999999999 4899999999999999987421 111211 3589999999999873
No 27
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=3.4e-33 Score=297.13 Aligned_cols=351 Identities=22% Similarity=0.279 Sum_probs=224.3
Q ss_pred cCCCccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHH--------hhccCCCeEEeCCCCeeecccccccccc
Q 008063 41 TNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQ--------QLAADGTNVLNLQGKVVVPGFIDSHVHF 112 (579)
Q Consensus 41 ~~~~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~--------~~~~~~~~viD~~g~~V~PG~ID~H~H~ 112 (579)
....++++|+|++|+++++ ...++|+|+||||++|++..+.. ...+++.++||++|++|+|||||+|+|+
T Consensus 63 ~~~~~dllI~n~~vvd~~g--~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~ 140 (570)
T 4ac7_C 63 TENVLDLLLTNALILDYTG--IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHF 140 (570)
T ss_dssp TTTBCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEEC
T ss_pred ccCCCCEEEECeEEECCCC--cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEeccccc
Confidence 3457899999999999765 36789999999999999753210 0012467899999999999999999998
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhc
Q 008063 113 IPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLAN 192 (579)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n 192 (579)
..++
T Consensus 141 ~~Pg---------------------------------------------------------------------------- 144 (570)
T 4ac7_C 141 INPD---------------------------------------------------------------------------- 144 (570)
T ss_dssp CCTT----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 4321
Q ss_pred HHHHHHcCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCC
Q 008063 193 SVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYP 272 (579)
Q Consensus 193 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~ 272 (579)
..+.+++.|+|++.+.+....
T Consensus 145 -----------------------------------------------------------~~~aAl~gGvTTvv~gg~~p~ 165 (570)
T 4ac7_C 145 -----------------------------------------------------------QVDVALANGITTLFGGGTGPA 165 (570)
T ss_dssp -----------------------------------------------------------HHHHHHHTTEEEEEEECSSSC
T ss_pred -----------------------------------------------------------hHHHHHhcCCeEEEecCcCcc
Confidence 124589999999997543111
Q ss_pred ---CCccccchHHHHHHHHHHhhcCCCeeEEEEccCc--cchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccc
Q 008063 273 ---GESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALF 347 (579)
Q Consensus 273 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~ 347 (579)
+..+........+.. ++......+++.++... ....+..+..+. + ..++|.+.+
T Consensus 166 ~~~n~~p~~~~~~~l~~~--l~aa~~~~v~~~~~g~~~~~~l~el~el~~a-G--------a~gfK~~~~---------- 224 (570)
T 4ac7_C 166 EGSKATTVTPGPWNIEKM--LKSTEGLPINVGILGKGHGSSIAPIMEQIDA-G--------AAGLKIHED---------- 224 (570)
T ss_dssp HHHHHSSCCCHHHHHHHH--HHHHTTCSSEEEEEEECCCSSHHHHHHHHHH-T--------CCEEEEEGG----------
T ss_pred cccCCcCcCCcHHHHHHH--HHHhhhCCeeEEEEeccCCcCHHHHHHHHHc-C--------CCeEeeccC----------
Confidence 011111111111211 22223455666655432 222333333221 1 113444321
Q ss_pred cCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC-hhhH
Q 008063 348 HEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTA 426 (579)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~-~~~~ 426 (579)
+ ..+++.+.+.++.++++|+++.+|+.+..+...+.+.++.. .+.....+++.|+...+ ++.+
T Consensus 225 ---~----------~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedalea~---~Gr~ih~~HiEgag~~hapd~i 288 (570)
T 4ac7_C 225 ---W----------GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAI---NGRVIHSFHVEGAGGGHAPDIM 288 (570)
T ss_dssp ---G----------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHH---TTCCEEETTTTSTTSSSTTTGG
T ss_pred ---C----------CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHHHh---CCCcceeEeeeccccccChHHH
Confidence 1 15789999999999999999999998554333333333322 23222233444444444 7778
Q ss_pred HHHhhCCcEEEe-ccccc--c---------------------cchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCC
Q 008063 427 ARFGDQGIVASM-QPQHL--L---------------------DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW 482 (579)
Q Consensus 427 ~~~~~~~i~~~~-~p~~~--~---------------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~ 482 (579)
+++...++..+. +|... . .+..+..+++. . +...+++.|++.|+.+++|||+
T Consensus 289 ~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir---~-~~i~a~~~L~d~G~~v~~gSD~ 364 (570)
T 4ac7_C 289 AMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIR---P-ETIAAEDILHDLGIISMMSTDA 364 (570)
T ss_dssp GGGGSTTEEEBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSC---H-HHHHHHHHHHHTTSSCBCCCCB
T ss_pred HHhccCCccccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhh---h-hhcccccchhhcCCEEEEECcc
Confidence 888888887765 34310 0 11112222332 3 5567899999999999999998
Q ss_pred CCCCC------CHHHHHHHH-HcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCC
Q 008063 483 PVADI------NPLCAIRTA-MKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS 555 (579)
Q Consensus 483 ~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~ 555 (579)
+.... ..|+....+ ..+....+. .+ ...++++++||+++|.|||+++|+++.+|+|++||.|||||||.++
T Consensus 365 p~~~~~ge~~~~~~~~a~~~~~~rg~l~~~-~~-~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~ 442 (570)
T 4ac7_C 365 LAMGRAGEMVLRTWQTADKMKKQRGPLAEE-KN-GSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKF 442 (570)
T ss_dssp TTSSCTTCHHHHHHHHHHHHHHHHCSCTTC-CT-TCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGG
T ss_pred cccCCcCcccCcHHHHHHHHHHhcCCCCCc-cc-cccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchh
Confidence 86441 233332222 222211111 11 4567999999999999999999999989999999999999999888
Q ss_pred CCChhhccCCeEEEEEECCEEeC
Q 008063 556 WEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 556 ~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
+. .++..||++|++||
T Consensus 443 ~~-------~~v~~t~~~G~~v~ 458 (570)
T 4ac7_C 443 FG-------VKADRVIKGGIIAY 458 (570)
T ss_dssp TT-------TSCSEEEETTEEEE
T ss_pred cc-------CceEEEEECCEEEE
Confidence 74 36899999999997
No 28
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=3.4e-33 Score=297.13 Aligned_cols=351 Identities=22% Similarity=0.279 Sum_probs=224.3
Q ss_pred cCCCccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHH--------hhccCCCeEEeCCCCeeecccccccccc
Q 008063 41 TNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQ--------QLAADGTNVLNLQGKVVVPGFIDSHVHF 112 (579)
Q Consensus 41 ~~~~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~--------~~~~~~~~viD~~g~~V~PG~ID~H~H~ 112 (579)
....++++|+|++|+++++ ...++|+|+||||++|++..+.. ...+++.++||++|++|+|||||+|+|+
T Consensus 63 ~~~~~dllI~n~~vvd~~g--~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~ 140 (570)
T 4ubp_C 63 TENVLDLLLTNALILDYTG--IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHF 140 (570)
T ss_dssp TTTBCSEEEEEEEEEETTE--EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEEC
T ss_pred ccCCCCEEEECeEEECCCC--cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCC
Confidence 3457899999999999765 36789999999999999753210 0012467899999999999999999998
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhc
Q 008063 113 IPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLAN 192 (579)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n 192 (579)
..++
T Consensus 141 ~~Pg---------------------------------------------------------------------------- 144 (570)
T 4ubp_C 141 INPD---------------------------------------------------------------------------- 144 (570)
T ss_dssp CCTT----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 4321
Q ss_pred HHHHHHcCCCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCC
Q 008063 193 SVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYP 272 (579)
Q Consensus 193 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~ 272 (579)
..+.+++.|+|++.+.+....
T Consensus 145 -----------------------------------------------------------~~~aAl~gGvTTvv~gg~~p~ 165 (570)
T 4ubp_C 145 -----------------------------------------------------------QVDVALANGITTLFGGGTGPA 165 (570)
T ss_dssp -----------------------------------------------------------HHHHHHHTTEEEEEEECCSSC
T ss_pred -----------------------------------------------------------hHHHHHhcCCeEEEecCcccc
Confidence 124589999999997543111
Q ss_pred ---CCccccchHHHHHHHHHHhhcCCCeeEEEEccCc--cchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccc
Q 008063 273 ---GESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALF 347 (579)
Q Consensus 273 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~ 347 (579)
+..+........+.. ++......+++.++... ....+..+..+. + ..++|.+.+
T Consensus 166 ~~~n~~p~~~~~~~l~~~--l~aa~~~~v~~~~~g~~~~~~l~el~el~~a-G--------a~gfK~~~~---------- 224 (570)
T 4ubp_C 166 EGSKATTVTPGPWNIEKM--LKSTEGLPINVGILGKGHGSSIAPIMEQIDA-G--------AAGLKIHED---------- 224 (570)
T ss_dssp HHHHHSSCCCHHHHHHHH--HHHHTTCSSEEEEEEECCCSSHHHHHHHHHH-T--------CCEEEEEGG----------
T ss_pred ccCCCcCCCCcHHHHHHH--HHHhhhCCeeEEEEeccCCcCHHHHHHHHHc-C--------CCeEeeccC----------
Confidence 011111111111211 22223455666655432 222333333221 1 113444321
Q ss_pred cCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC-hhhH
Q 008063 348 HEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTA 426 (579)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~-~~~~ 426 (579)
+ ..+++.+.+.++.++++|+++.+|+.+..+...+.+.++.. .+.....+++.|+...+ ++.+
T Consensus 225 ---~----------~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedalea~---~Gr~ih~~HiEgag~~hapd~i 288 (570)
T 4ubp_C 225 ---W----------GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAI---NGRVIHSFHVEGAGGGHAPDIM 288 (570)
T ss_dssp ---G----------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHH---TTCCEEETTTTSTTSSSTTTGG
T ss_pred ---C----------CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHHHh---CCCceeEEEecccccccChHHH
Confidence 1 15789999999999999999999998554333333333322 23222233444444444 7778
Q ss_pred HHHhhCCcEEEe-ccccc--c---------------------cchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCC
Q 008063 427 ARFGDQGIVASM-QPQHL--L---------------------DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW 482 (579)
Q Consensus 427 ~~~~~~~i~~~~-~p~~~--~---------------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~ 482 (579)
+++...++..+. +|... . .+..+..+++. . +...+++.|++.|+.+++|||+
T Consensus 289 ~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir---~-~~i~a~~~L~d~G~~v~~gSD~ 364 (570)
T 4ubp_C 289 AMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIR---P-ETIAAEDILHDLGIISMMSTDA 364 (570)
T ss_dssp GGGGSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSC---H-HHHHHHHHHHHTTSSCBCCCCB
T ss_pred HHhccCCccccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhh---h-hccccccchhhcCCEEEEECcc
Confidence 888888887765 34310 0 11112222332 3 5567899999999999999998
Q ss_pred CCCCC------CHHHHHHHH-HcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCC
Q 008063 483 PVADI------NPLCAIRTA-MKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS 555 (579)
Q Consensus 483 ~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~ 555 (579)
+.... ..|+....+ ..+....+. .+ ...++++++||+++|.|||+++|+++.+|+|++||.|||||||.++
T Consensus 365 p~~~~~ge~~~~~~~~a~~~~~~rg~l~~~-~~-~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~ 442 (570)
T 4ubp_C 365 LAMGRAGEMVLRTWQTADKMKKQRGPLAEE-KN-GSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKF 442 (570)
T ss_dssp TTSSCTTCHHHHHHHHHHHHHHHHCSCTTC-CS-SCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGG
T ss_pred cccCCcCcccCcHHHHHHHHHHhcCCCCCc-cc-cccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECccc
Confidence 86441 233332222 222211111 11 4567999999999999999999999989999999999999999888
Q ss_pred CCChhhccCCeEEEEEECCEEeC
Q 008063 556 WEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 556 ~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
+. .++..||++|++||
T Consensus 443 ~~-------~~v~~t~~~G~~v~ 458 (570)
T 4ubp_C 443 FG-------VKADRVIKGGIIAY 458 (570)
T ss_dssp TT-------TSCSEEEETTEEEE
T ss_pred cc-------CCeeEEEECCEEEE
Confidence 74 36899999999997
No 29
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=3.4e-33 Score=293.11 Aligned_cols=354 Identities=20% Similarity=0.186 Sum_probs=227.1
Q ss_pred EEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccccCC
Q 008063 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (579)
Q Consensus 47 ~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~~~ 126 (579)
++|+|++|+++++.....++|+|+||||++|++.. ++.+ ||++|++|+|||||+|+|+...... +
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~-------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~-------~ 65 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE-------VKVD-LDLSGKLVMPALFNTHTHAPMTLLR-------G 65 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS-------CCCS-EECTTEEEEECEEEEEECGGGGGGT-------T
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC-------Ccce-ecCCCcEEeecccchhhccchhhhc-------c
Confidence 47999999998654457789999999999998642 2346 9999999999999999999764321 0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCCCC
Q 008063 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (579)
Q Consensus 127 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~~~ 206 (579)
.. ...|..+|+...
T Consensus 66 ~~---------------------------------~~~~~~~~~~~~--------------------------------- 79 (406)
T 1p1m_A 66 VA---------------------------------EDLSFEEWLFSK--------------------------------- 79 (406)
T ss_dssp SS---------------------------------CSCCHHHHHHTT---------------------------------
T ss_pred cc---------------------------------CCCCHHHHHHhh---------------------------------
Confidence 00 011222222210
Q ss_pred CCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHHHH
Q 008063 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (579)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~~~ 286 (579)
.....+..++++.......++..++++|+|++.+++. ... ..
T Consensus 80 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~~---~~ 121 (406)
T 1p1m_A 80 --------------------------VLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF---------HEE---WI 121 (406)
T ss_dssp --------------------------HHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES---------SHH---HH
T ss_pred --------------------------hccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh---------CHH---HH
Confidence 0000012355777777778888999999999999742 111 22
Q ss_pred HHHHhhcCCCeeEEEEccCc-----cc---hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCC
Q 008063 287 YQWASYSEKMKIRVCLFFPL-----ET---WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNY 358 (579)
Q Consensus 287 ~~~~~~~~~~~i~v~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~ 358 (579)
.+.+.+ .+++++...+. .. .....+..+...... +.+++.. ....++
T Consensus 122 ~~~~~~---~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~---------~~~~~~------- 176 (406)
T 1p1m_A 122 AKAVRD---FGMRALLTRGLVDSNGDDGGRLEENLKLYNEWNGFE------GRIFVGF---------GPHSPY------- 176 (406)
T ss_dssp HHHHHH---HCCEEEEEEEECCBTTBCTTHHHHHHHHHHHHTTGG------GTEEEEE---------EECCTT-------
T ss_pred HHHHHH---cCCEEEEEcccccCCCCHHHHHHHHHHHHHHhhCCC------CcEEEEE---------ecCccC-------
Confidence 333322 23444321111 11 111111221100000 1122111 112222
Q ss_pred cccCCCHHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHH--HHHHHHHhcCCCCCCceEeecc---CCChhhHHHHhhC
Q 008063 359 GLQVMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLD--MYKSVVVTTGKRDQRFRIEHAQ---HLASGTAARFGDQ 432 (579)
Q Consensus 359 ~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~--~~~~~~~~~~~~~~~~~i~H~~---~~~~~~~~~~~~~ 432 (579)
.++++.+.++++.|++.|+++++|+.+. .+++.+++ .+. ....|..+ ..+.|+. +++++++++++
T Consensus 177 ---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g--~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~-- 247 (406)
T 1p1m_A 177 ---LCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIG--LKEVKTIA--AHCVHLPERYFGVLKDIPFFV-- 247 (406)
T ss_dssp ---TSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTT--TTTSCEEE--EECTTCCGGGTTTTTTSSEEE--
T ss_pred ---cCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCC--HhHcCcce--eEeeeccCcccCCHHHHHHHH--
Confidence 2678999999999999999999999854 33443333 111 11122111 5789999 99998877765
Q ss_pred CcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHHHcccCCCCCCCCCC
Q 008063 433 GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIP 510 (579)
Q Consensus 433 ~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (579)
.+||.++. .++ ....+++.+++.|+++++|||++.. ..+++.+++.++.+... ..
T Consensus 248 ----~~~p~~~~--------~~~-----~~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~------~~ 304 (406)
T 1p1m_A 248 ----SHNPASNL--------KLG-----NGIAPVQRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKA------QN 304 (406)
T ss_dssp ----EECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCCTTTTSCCCHHHHHHHHHHHHHT------TC
T ss_pred ----HhCcHHHh--------hcC-----CCcCcHHHHHhCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhcc------cC
Confidence 66776432 223 3455889999999999999998754 36888888877643210 01
Q ss_pred CCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC--Chhhcc--------CCeEEEEEECCEEeC
Q 008063 511 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV--------SASIEATYVSGVQAY 578 (579)
Q Consensus 511 ~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~--~~~~~~--------~~~v~~v~v~G~~v~ 578 (579)
..+++++++++++|.|||+++|+++ |+|+|||.|||||+|.+++. +..+.. ..+|..||++|++||
T Consensus 305 ~~~ls~~~al~~~T~~~A~~lgl~~--G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 380 (406)
T 1p1m_A 305 PRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHAFSGEVFATMVAGKWIYF 380 (406)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHTCSC--SSCCTTSBCCEEEEECCSGGGCSGGGHHHHHHHTCCSCCSEEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCC--cccCCCCcccEEEEeCCccccCCccChHHHheEecCCCCceEEEECCEEEE
Confidence 4579999999999999999999986 99999999999999999643 212211 468999999999986
No 30
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=100.00 E-value=1.5e-32 Score=287.27 Aligned_cols=177 Identities=21% Similarity=0.264 Sum_probs=138.3
Q ss_pred HHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccccch
Q 008063 368 LLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDA 447 (579)
Q Consensus 368 l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~ 447 (579)
..+.+..+.+.++++.+|+.+...+...++..++. +.+..+.|+...++ +++++++.|+.+++||.+.....
T Consensus 209 ~~e~l~~~~~~~~~v~iHa~~~~~i~~~~~~~~~~-------g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~ 280 (396)
T 3ooq_A 209 KMEVGEMVLRKKIPARMHAHRADDILTAIRIAEEF-------GFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTK 280 (396)
T ss_dssp HHHHHHHHHTTSSCEEEEECSHHHHHHHHHHHHHH-------TCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCS
T ss_pred hHHHHHHHHcCCCcEEEEECchhHHHHHHHHHHHc-------CCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccc
Confidence 34445555689999999999887776666655543 23679999998765 59999999999999997654221
Q ss_pred hHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCCCHHH-HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHH
Q 008063 448 DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLC-AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLS 526 (579)
Q Consensus 448 ~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~n 526 (579)
. .+ +. ....+++.++++|+++++|||++..+...+. .+..+ .+.+++++++|+++|.|
T Consensus 281 ~----~~---~~-~~~~~~~~l~~~Gv~v~lgtD~~~~~~~~l~~~~~~~-------------~~~gl~~~~al~~~T~n 339 (396)
T 3ooq_A 281 L----EL---KD-LTMETIAKLLKDGVLIALMCDHPVIPLEFATVQAATA-------------MRYGAKEEDLLKILTVN 339 (396)
T ss_dssp G----GG---TT-CCTTHHHHHHHTTCCEEECCTTTTSCGGGHHHHHHHG-------------GGGTCCHHHHHHTTTHH
T ss_pred h----hH---Hh-hhhHHHHHHHHCCCEEEEEcCCCccCccHHHHHHHHH-------------HHcCCCHHHHHHHHHHH
Confidence 1 11 11 4566899999999999999999876644442 22222 12469999999999999
Q ss_pred HHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEeC
Q 008063 527 AARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 527 pA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
||++||+++++|+|++||.|||||+|.||++. ..+|..||++|++||
T Consensus 340 ~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~-----~~~v~~v~~~G~~v~ 386 (396)
T 3ooq_A 340 PAKILGLEDRIGSIEPGKDADLVVWSGHPFDM-----KSVVERVYIDGVEVF 386 (396)
T ss_dssp HHHHTTCTTTSSSCCTTSBCCEEEESSCTTST-----TCCEEEEEETTEEEE
T ss_pred HHHHhCCCCCeeeECCCCcCCEEEECCCcccc-----ccceeEEEECCEEEe
Confidence 99999999989999999999999999999874 348999999999986
No 31
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=1.4e-31 Score=285.19 Aligned_cols=363 Identities=18% Similarity=0.216 Sum_probs=223.9
Q ss_pred ccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 45 ~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
|+++|+|++|+++++ ...++|+|+||||++|++..+ +++.++||++|++|+|||||+|+|+..+..
T Consensus 1 M~~~i~n~~v~~~~~--~~~~~v~i~~g~I~~i~~~~~-----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~------- 66 (461)
T 3sfw_A 1 MKKWIRNGTVVTASD--TYQADVLIDGEKVVAIGSDLQ-----ATDAEVIDATGYYLLPGGIDPHTHLDMPFG------- 66 (461)
T ss_dssp CEEEEESCEEECSSC--EEECEEEEETTEEEEEESCCC-----CSSCEEEECTTCEEEECEEEEEECTTCEET-------
T ss_pred CcEEEECeEEECCCC--cEEEEEEEECCEEEEEeCCCC-----CCCCeEEECCCCEEEeeeEEeEeccCcCCC-------
Confidence 578999999999765 367799999999999997542 256789999999999999999999854310
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
+ ...
T Consensus 67 -----------------------------~---------~~~-------------------------------------- 70 (461)
T 3sfw_A 67 -----------------------------G---------TVT-------------------------------------- 70 (461)
T ss_dssp -----------------------------T---------EEC--------------------------------------
T ss_pred -----------------------------C---------ccc--------------------------------------
Confidence 0 000
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~ 284 (579)
.+.+....+.+++.|+|++.++....+. .......
T Consensus 71 -----------------------------------------~e~~~~~~~~~~~~GvTt~~~~~~~~~~----~~~~~~~ 105 (461)
T 3sfw_A 71 -----------------------------------------SDNFFTGTKAAAFGGTTSIVDFCLTSKG----ESLHSAI 105 (461)
T ss_dssp -----------------------------------------SCCHHHHHHHHHHTTEEEEEEEECCCTT----SCHHHHH
T ss_pred -----------------------------------------HhHHHHHHHHHHhCCEEEEEccCCCCCc----chHHHHH
Confidence 0012335566889999999997643222 2233333
Q ss_pred HHHHHHhhcCCCeeEEEEccCcc--chh---hHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCc
Q 008063 285 DVYQWASYSEKMKIRVCLFFPLE--TWS---SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYG 359 (579)
Q Consensus 285 ~~~~~~~~~~~~~i~v~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~ 359 (579)
+....... ....+++..+.... ..+ +..+..+. ....++|++.+. . +
T Consensus 106 ~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~G~~~ik~~~~~-------------~------~ 157 (461)
T 3sfw_A 106 ATWHEKAR-GKAVIDYGFHLMVSDANDHVLEELESVVNN--------EGITSLKVFMAY-------------K------N 157 (461)
T ss_dssp HHHHHHHT-TTCSSEEEEEEECSCCCHHHHHHHHHHHHT--------SCCCEEEEESSS-------------T------T
T ss_pred HHHHHHhh-cCcEEEEEEEEEEeCCCHHHHHHHHHHHHh--------CCCCEEEEEEec-------------C------C
Confidence 33322222 22333433322221 111 22222221 012234544321 0 1
Q ss_pred ccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHH------------------------HHHHHHHhcCCCCCCceE
Q 008063 360 LQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD------------------------MYKSVVVTTGKRDQRFRI 415 (579)
Q Consensus 360 ~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~i 415 (579)
....+.+.+.++++.++++|.++.+|+.....+....+ ...+........+.+.++
T Consensus 158 ~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi 237 (461)
T 3sfw_A 158 VLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYV 237 (461)
T ss_dssp TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 12368899999999999999999999875544332211 111111111112446666
Q ss_pred eeccCCCh-hhHHHHhhCCc--EEEecccccccchhHHHH---------hhChhhhhhhhhhHHHHHHCCCeeeecCCCC
Q 008063 416 EHAQHLAS-GTAARFGDQGI--VASMQPQHLLDDADSARK---------KLGVDRAERESYLFQSLLANNALLALGSDWP 483 (579)
Q Consensus 416 ~H~~~~~~-~~~~~~~~~~i--~~~~~p~~~~~~~~~~~~---------~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~ 483 (579)
.|...... +.++++++.|+ ++.+||++.....+.+.. ..++.|.......+...++.|++++++||+.
T Consensus 238 ~H~s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~ 317 (461)
T 3sfw_A 238 VHVSCADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHC 317 (461)
T ss_dssp CSCCSHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBC
T ss_pred EecCcHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCC
Confidence 66553222 55666677765 458899876554443321 2244444455566788999999999999976
Q ss_pred CCCCC--------HH-----------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCC
Q 008063 484 VADIN--------PL-----------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 544 (579)
Q Consensus 484 ~~~~~--------~~-----------~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~ 544 (579)
..... .+ ..+...+.. +....+++++++++++|.|||+++|+++.+|+|++|+
T Consensus 318 p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~ 389 (461)
T 3sfw_A 318 PFNFSGQKELGRRDFTKIPNGGPIIEDRMTILFSE--------GVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGS 389 (461)
T ss_dssp CCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHH--------TTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTS
T ss_pred CCCchhhhhcccCCHhhCCCCCccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCC
Confidence 44311 11 111111111 1134569999999999999999999977799999999
Q ss_pred cccEEEeCCCC-CC-Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 545 IADFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 545 ~ADlvvld~~~-~~-~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
.|||||+|.+. +. +.+++. ..+|..||++|++||
T Consensus 390 ~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~~~v~~t~v~G~~v~ 438 (461)
T 3sfw_A 390 DADIVLFDPTVQRTISVETHHMNVDYNPFEGMQVHGDVISVLSRGAFVV 438 (461)
T ss_dssp BCCEEEEEEEEEEECCTTTCCSSSSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred cCCEEEEcCCCCEEEchHHcccccCCCCCCCCEecceEEEEEECCEEEE
Confidence 99999999772 22 222221 248999999999997
No 32
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=9.1e-32 Score=286.72 Aligned_cols=361 Identities=17% Similarity=0.177 Sum_probs=218.7
Q ss_pred ccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 45 ~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
++++|+|++|+++++. ..++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+...+.
T Consensus 2 ~~~li~~~~v~~~~~~--~~~~v~I~~g~I~~ig~~~~~----~~~~~viD~~g~~v~PGlID~H~H~~~~~~------- 68 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGI--TEADILVKDGKVAAISADTSD----VEASRTIDAGGKFVMPGVVDEHVHIIDMDL------- 68 (458)
T ss_dssp EEEEEEEEEEEETTEE--EEEEEEEETTEEEEEESCCTT----CCEEEEEECTTCEEEECEEEEEEECCCGGG-------
T ss_pred ceEEEECcEEECCCCc--eeeeEEEECCEEEEecCCCCC----CCCCeEEeCCCCEEecCEEEeeecccCCCC-------
Confidence 4689999999998753 678999999999999875321 134579999999999999999999853210
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
...
T Consensus 69 ---------------------------------------~~~-------------------------------------- 71 (458)
T 1gkr_A 69 ---------------------------------------KNR-------------------------------------- 71 (458)
T ss_dssp ---------------------------------------TTT--------------------------------------
T ss_pred ---------------------------------------CCc--------------------------------------
Confidence 000
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCC-cCCCCCccccchHHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFG-RYYPGESVQLSWEDF 283 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~-~~~~~~~~~~~~~~~ 283 (579)
+ + .+....+.++++|+|++.+++ +..+.. ...+.+
T Consensus 72 ---~----------------------------------~----~~~~~~~~~~~~GvTtv~~~~~~~~~~~---~~~~~~ 107 (458)
T 1gkr_A 72 ---Y----------------------------------G----RFELDSESAAVGGITTIIEMPITFPPTT---TLDAFL 107 (458)
T ss_dssp ---S----------------------------------C----CHHHHHHHHHHHTEEEEEECSCSSSCSC---SHHHHH
T ss_pred ---h----------------------------------h----HHHHHHHHHHcCCEEEEEeCCCCCCCCC---CcHHHH
Confidence 0 0 012244567899999999986 322211 123333
Q ss_pred HHHHHHHhhcCCCeeEEEEccCccchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcccCC
Q 008063 284 ADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVM 363 (579)
Q Consensus 284 ~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (579)
....+...... ....++........++..+.... . ..++|++.+... .+ .....
T Consensus 108 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----g-----~~~i~~~~~~~~-----------~~-----~~~~~ 161 (458)
T 1gkr_A 108 EKKKQAGQRLK-VDFALYGGGVPGNLPEIRKMHDA----G-----AVGFKSMMAASV-----------PG-----MFDAV 161 (458)
T ss_dssp HHHHHHHHHCS-SEEEEEEECCTTCHHHHHHHHHT----T-----CCEEEEESSCSB-----------TT-----TBCBC
T ss_pred HHHHHHhhhCc-eeEEEEeccCCCCHHHHHHHHHc----C-----CcEEEEeecccC-----------CC-----CcccC
Confidence 33444444333 32222211111222333333221 1 123454432110 00 02236
Q ss_pred CHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHH------------------------H---HHHhcCCCCCCceEe
Q 008063 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYK------------------------S---VVVTTGKRDQRFRIE 416 (579)
Q Consensus 364 ~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~------------------------~---~~~~~~~~~~~~~i~ 416 (579)
+.+.++++++.|++++.++.+|+.....++..++.+. + ..... +.+.++.
T Consensus 162 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~---g~~~h~~ 238 (458)
T 1gkr_A 162 SDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEA---GCRLIVL 238 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHH---CCEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHh---CCCEEEE
Confidence 8899999999999999999999986554433222111 1 11112 2234555
Q ss_pred eccCCChhhHHHHh---hCC--cEEEecccccccchhHHHH------hhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC
Q 008063 417 HAQHLASGTAARFG---DQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDWPVA 485 (579)
Q Consensus 417 H~~~~~~~~~~~~~---~~~--i~~~~~p~~~~~~~~~~~~------~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~ 485 (579)
|+.. ..+++.+. +.| +.+.+||.+.....+.+.. ..++.|......++..+++.|+++++|||....
T Consensus 239 H~~~--~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD~~~~ 316 (458)
T 1gkr_A 239 HVSN--PDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGH 316 (458)
T ss_dssp CCCS--HHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECC
T ss_pred eCCC--HHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 5542 34444443 365 7888899876544333321 122222224456778899999999999997432
Q ss_pred C--------CCHHH----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCccc
Q 008063 486 D--------INPLC----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIAD 547 (579)
Q Consensus 486 ~--------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~AD 547 (579)
. .+.+. .+...+... ....++|++++++++|.|||++||+++.+|+|++||.||
T Consensus 317 ~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~--------~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~AD 388 (458)
T 1gkr_A 317 PVEDKEPGWKDVWKAGNGALGLETSLPMMLTNG--------VNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDAD 388 (458)
T ss_dssp CGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHT--------GGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCC
T ss_pred ChHHhccccCCHhHCCCCcccHHHHHHHHHHHH--------HHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCC
Confidence 2 12221 111111110 122369999999999999999999987799999999999
Q ss_pred EEEeCCCCC-C-Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 548 FVILSTSSW-E-DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 548 lvvld~~~~-~-~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
|||+|.++. . +..++. ..+|..||++|++||
T Consensus 389 lvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~ 434 (458)
T 1gkr_A 389 LLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVA 434 (458)
T ss_dssp EEEEESCCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEE
T ss_pred EEEEcCCcceEEcHHHccccCCCCCcCCCEeeeEEEEEEECCEEEE
Confidence 999998853 2 222221 248999999999987
No 33
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.98 E-value=1e-31 Score=290.30 Aligned_cols=198 Identities=17% Similarity=0.128 Sum_probs=133.3
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC----hhhHHHHhhCCcEEEe
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA----SGTAARFGDQGIVASM 438 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~----~~~~~~~~~~~i~~~~ 438 (579)
.+++.+.++++.|+++|+++.+|+.+..+...+.+.++. . .+.+.++.|+.... ++.++++++.|+..+.
T Consensus 226 ~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~g~~~~~la~---~---~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~~~ 299 (569)
T 1e9y_B 226 TTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAA---I---AGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAS 299 (569)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECCCTTCSSCCHHHHHHH---H---TTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEcCCcccchHHHHHHHH---H---cCCCEEEEEcccCcccccHHHHHHHHHcCCeeEe
Confidence 578999999999999999999999753211111112211 1 23477888888765 7899999999986555
Q ss_pred cccccccchhHHH---------HhhCh------------hhhhhhhhhHHHHHHCCCeeeecCCCCCCCC------CHHH
Q 008063 439 QPQHLLDDADSAR---------KKLGV------------DRAERESYLFQSLLANNALLALGSDWPVADI------NPLC 491 (579)
Q Consensus 439 ~p~~~~~~~~~~~---------~~l~~------------~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~------~~~~ 491 (579)
++.+...+.+... ..+.+ .+. ....+++.+.+.|+++++|||++..+. ++|.
T Consensus 300 ~~ptl~~t~~~~~~~~d~~~v~h~l~~~~~ed~~~~~~rlr~-~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~~~ 378 (569)
T 1e9y_B 300 TNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRP-QTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITRTWQ 378 (569)
T ss_dssp CGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCH-HHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHHH
T ss_pred eCCccccccchhhhhhchhhhhhhcCcccHHHHHHhhcchhh-hHHHHHHHHHhCCCEEEEeCCCCccCcccccccchhh
Confidence 4333222111110 00110 111 234456778889999999999865432 2332
Q ss_pred ---HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEE
Q 008063 492 ---AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 568 (579)
Q Consensus 492 ---~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~ 568 (579)
.+....... . .....+.+++++++|+++|.|||+++|+++.+|+|++||.|||||||.+++ ..++.
T Consensus 379 ~~~~~~~~~G~l--~--~~~~~~~~ls~~~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~-------~~~v~ 447 (569)
T 1e9y_B 379 TADKNKKEFGRL--K--EEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF-------GVKPN 447 (569)
T ss_dssp HHHHHHHHHCSC--S--SCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT-------TTCCS
T ss_pred HHHHhHhhccCc--c--hhhccccCCCHHHHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc-------CCCcc
Confidence 222111100 0 011235679999999999999999999998899999999999999999986 33789
Q ss_pred EEEECCEEeC
Q 008063 569 ATYVSGVQAY 578 (579)
Q Consensus 569 ~v~v~G~~v~ 578 (579)
.||++|++||
T Consensus 448 ~v~~~G~iv~ 457 (569)
T 1e9y_B 448 MIIKGGFIAL 457 (569)
T ss_dssp EEEETTEEEE
T ss_pred EEEECCEEEE
Confidence 9999999986
No 34
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=99.98 E-value=6.7e-31 Score=279.21 Aligned_cols=366 Identities=19% Similarity=0.214 Sum_probs=230.2
Q ss_pred CccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecC--hHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccc
Q 008063 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGN--YSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMAR 121 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~--~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~ 121 (579)
+|+++|+|++|+++++. ..++|+|+||||++|++ ..+ +++.++||++|++|+|||||+|+|+..++..
T Consensus 5 ~~~~~i~~~~v~~~~~~--~~~~v~i~~g~I~~i~~~~~~~-----~~~~~~id~~g~~v~PG~ID~H~H~~~~~~~--- 74 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTT--YRADVAIRNGIVSAITEPGSIS-----SDDGPAIDGTGLHLFPGMVDVHVHFNEPGRT--- 74 (448)
T ss_dssp CCSEEEEEEEEECSSCE--EEEEEEEETTEEEEEESTTCSC-----TTSSCEEECTTCEEEECEEEEEECCCTTTSG---
T ss_pred cccEEEEeeEEECCCCc--eEeEEEEECCEEEEeeCccCCC-----CCCCeEEECCCCEEecCEEEeeeccCCCCCC---
Confidence 47899999999998765 77899999999999997 322 2467899999999999999999998543210
Q ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCC
Q 008063 122 VKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (579)
Q Consensus 122 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~ 201 (579)
.
T Consensus 75 --------------------------------------------~----------------------------------- 75 (448)
T 3hm7_A 75 --------------------------------------------E----------------------------------- 75 (448)
T ss_dssp --------------------------------------------G-----------------------------------
T ss_pred --------------------------------------------c-----------------------------------
Confidence 0
Q ss_pred CCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCC-cCCCCCccccch
Q 008063 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFG-RYYPGESVQLSW 280 (579)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~-~~~~~~~~~~~~ 280 (579)
.+.+....+.+.+.|+|++.+++ ...+. ....
T Consensus 76 --------------------------------------------~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~---~~~~ 108 (448)
T 3hm7_A 76 --------------------------------------------WEGFASGSKSLAAGGVTTYFDMPLNSNPP---TITR 108 (448)
T ss_dssp --------------------------------------------GCCSHHHHHHHHTTTEEEEEECSSSSSSC---SCSH
T ss_pred --------------------------------------------HhHHHHHHHHHHhCCEEEEEeCCCCCCCC---CChH
Confidence 00112355678999999999986 33222 2234
Q ss_pred HHHHHHHHHHhhcCCCeeEEEEccCccchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcc
Q 008063 281 EDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGL 360 (579)
Q Consensus 281 ~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~ 360 (579)
+.+....+.........+..+.........+..+.... ...+++.+.+... .+ ..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---------g~~~~~~~l~~~~-----------~~-----~~ 163 (448)
T 3hm7_A 109 EELDKKRQLANEKSLVDYRFWGGLVPGNIDHLQDLHDG---------GVIGFKAFMSECG-----------TD-----DF 163 (448)
T ss_dssp HHHHHHHTHHHHHCSSEEEEEEECCTTCGGGHHHHHHT---------TCSEEEEESSSCS-----------SS-----SS
T ss_pred HHHHHHHHHhccCCeeEEEEEEEecccCHHHHHHHHHc---------CCCEEEEeecccc-----------CC-----cc
Confidence 44444444444333344444433333333444444321 1223444332110 00 01
Q ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHH------------------------HHHHHHHHHHhcCCCCCCceEe
Q 008063 361 QVMELESLLSMTMASDKSGLQVAIHAIGDRANDL------------------------VLDMYKSVVVTTGKRDQRFRIE 416 (579)
Q Consensus 361 ~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~i~ 416 (579)
...+.+.+.+.++.+++.|+++.+|+.....+.. .....++........+.+..+.
T Consensus 164 ~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~ 243 (448)
T 3hm7_A 164 QFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHIC 243 (448)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 1247899999999999999999999975443221 0111111111111113467777
Q ss_pred eccCCCh-hhHHHHhhCC--cEEEecccccccchhHHHH------hhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCC
Q 008063 417 HAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDWPVADI 487 (579)
Q Consensus 417 H~~~~~~-~~~~~~~~~~--i~~~~~p~~~~~~~~~~~~------~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~ 487 (579)
|...... +.++++++.| +.+.+||++.....+.+.. ..++.|......++...++.|+..+++||......
T Consensus 244 H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD~~p~~~ 323 (448)
T 3hm7_A 244 HVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLP 323 (448)
T ss_dssp CCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCCBCCCCG
T ss_pred eCCCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeCCCCCCH
Confidence 7753222 3444455554 6788999888766655543 23334443556678888899999999999543321
Q ss_pred C-H----H-----------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEe
Q 008063 488 N-P----L-----------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVIL 551 (579)
Q Consensus 488 ~-~----~-----------~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvl 551 (579)
. . + ..+...+.. +....+++++++++++|.|||+++|+++.+|+|++|+.|||||+
T Consensus 324 ~~k~~~~~~~~~~G~~g~e~~l~~~~~~--------~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad~~~~ 395 (448)
T 3hm7_A 324 QMKTGKTIFEVWGGIAGCQNTLAVMLTE--------GYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEASFTLI 395 (448)
T ss_dssp GGGCCSSTTTSCCCBCCTTTHHHHHHHH--------TTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBCCEEEE
T ss_pred HHcccCCHhhCCCCCccHHHHHHHHHHH--------HHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcCCEEEE
Confidence 0 0 0 011111110 11356799999999999999999999877999999999999999
Q ss_pred CCC-CCC-Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 552 STS-SWE-DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 552 d~~-~~~-~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
|.+ ++. +.+++. ..+|..||++|++||
T Consensus 396 d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~ 437 (448)
T 3hm7_A 396 DLNESYTLNASDLYYRHPISPYVGQRFRGKVKHTICQGKHVY 437 (448)
T ss_dssp EEEEEEECCGGGCCSSSCCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred eCCCCEEEChHhcccccCCCCCCCCEEEEEEEEEEECCEEEE
Confidence 976 332 222221 358999999999997
No 35
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=99.98 E-value=1.3e-32 Score=293.95 Aligned_cols=368 Identities=18% Similarity=0.203 Sum_probs=207.1
Q ss_pred cCCCccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccc
Q 008063 41 TNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (579)
Q Consensus 41 ~~~~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~ 120 (579)
...+|+++|+|++|+++.+.....++|+|+||||++|++..+ +++.++||++|++|+|||||+|+|+...+.
T Consensus 43 ~~~mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~iD~~g~~v~PGlID~H~H~~~~~~--- 114 (467)
T 1xrt_A 43 DRWMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-----VPEAEIIDAKGLIVCPGFIDIHVHLRDPGQ--- 114 (467)
T ss_dssp ---CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-----CSSEEEEECTTSEEEECEEEEEECCCTTTC---
T ss_pred ccceeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-----CCCCcEEeCCCCEEccCEEEEeecccCCCC---
Confidence 345677999999999976543467899999999999987432 134689999999999999999999853211
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcC
Q 008063 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (579)
Q Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g 200 (579)
.| +
T Consensus 115 ---------------------------------~~---------~----------------------------------- 117 (467)
T 1xrt_A 115 ---------------------------------TY---------K----------------------------------- 117 (467)
T ss_dssp ---------------------------------TT---------T-----------------------------------
T ss_pred ---------------------------------Cc---------h-----------------------------------
Confidence 00 0
Q ss_pred CCCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccch
Q 008063 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (579)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~ 280 (579)
+ .+....+.++++|+|++.+++...+. ....
T Consensus 118 ------------------------------------------~----~~~~~~~~~~~~GvTtv~~~~~~~~~---~~~~ 148 (467)
T 1xrt_A 118 ------------------------------------------E----DIESGSRCAVAGGFTTIVCMPNTNPP---IDNT 148 (467)
T ss_dssp ------------------------------------------C----CHHHHHHHHHHTTEEEEEECSCSSSC---SCSH
T ss_pred ------------------------------------------h----hHHHHHHHHHhCCeEEEEecCCCCCC---CChH
Confidence 0 11224556899999999998642211 1122
Q ss_pred HHHHHHHHHHhhcCCCeeEEEEccCccc------hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCC
Q 008063 281 EDFADVYQWASYSEKMKIRVCLFFPLET------WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADE 354 (579)
Q Consensus 281 ~~~~~~~~~~~~~~~~~i~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~ 354 (579)
+......+.....+. +++........ ..+..++... |.. .+. +
T Consensus 149 ~~~~~~~~~~~~~g~--~~~~~~g~~~~~~~~~~~~~~~~l~~~------------g~~------------~i~-~---- 197 (467)
T 1xrt_A 149 TVVNYILQKSKSVGL--CRVLPTGTITKGRKGKEIADFYSLKEA------------GCV------------AFT-D---- 197 (467)
T ss_dssp HHHHHHHHHHHHHCS--SEEEECBCSBGGGCSSSBCCHHHHHHH------------TCC------------CBC-C----
T ss_pred HHHHHHHHHhcccCc--ceEEEEeeecCCCCcccHHHHHHHHHc------------CCE------------EEE-c----
Confidence 233333333333322 34443322111 1111111110 000 000 0
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHH--------------HHH------HHHHhcCCCCCCce
Q 008063 355 PHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD--------------MYK------SVVVTTGKRDQRFR 414 (579)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~--------------~~~------~~~~~~~~~~~~~~ 414 (579)
.+....+.+.++++++.|+++|+++.+|+.+...++..++ ... .........+.+.+
T Consensus 198 ---~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~h 274 (467)
T 1xrt_A 198 ---DGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHVH 274 (467)
T ss_dssp ---TTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC--------------------CHHHHHHHHHHHHHHHCCEEE
T ss_pred ---CCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHhcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCEE
Confidence 0112368899999999999999999999986432211110 000 00000001123445
Q ss_pred EeeccCCC-hhhHHHHhhCC--cEEEecccccccchhHHH------HhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC
Q 008063 415 IEHAQHLA-SGTAARFGDQG--IVASMQPQHLLDDADSAR------KKLGVDRAERESYLFQSLLANNALLALGSDWPVA 485 (579)
Q Consensus 415 i~H~~~~~-~~~~~~~~~~~--i~~~~~p~~~~~~~~~~~------~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~ 485 (579)
+.|+.... .+.++++++.| +.+.+||.+.....+.+. +..++.|......+++.+++.|+++++|||.+..
T Consensus 275 i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~~~~ 354 (467)
T 1xrt_A 275 IQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPH 354 (467)
T ss_dssp ESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHHHHHHTCSCEECCCBCCC
T ss_pred EEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCCCCC
Confidence 55654321 23445555788 778889987553332211 1122222223456788899999999999997543
Q ss_pred CC---CHHHHHHHHHcccCCCCC--CCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCC-C-C
Q 008063 486 DI---NPLCAIRTAMKRIPPGWD--NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-D 558 (579)
Q Consensus 486 ~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~-~-~ 558 (579)
.. ++|..+..++........ ..+.....++++++|+++|.|||++||++ +|+|+|||.|||||+|.++. . +
T Consensus 355 ~~~~~~~~~~~~~g~~g~e~~l~~~l~~~~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~ADlvvld~~~~~~i~ 432 (467)
T 1xrt_A 355 QTFEKELVEFAMPGIIGLQTALPSALELYRKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITIFDPNKEWILN 432 (467)
T ss_dssp CC-----------CCCCGGGHHHHHHHHHHTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBCCEEEEEEEEEEECS
T ss_pred ChhHhcccccCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCCCEEEEeCCCCEEEC
Confidence 32 222211110000000000 00001223999999999999999999997 79999999999999998762 1 2
Q ss_pred hhhc-------------cCCeEEEEEECCEEeC
Q 008063 559 FAAE-------------VSASIEATYVSGVQAY 578 (579)
Q Consensus 559 ~~~~-------------~~~~v~~v~v~G~~v~ 578 (579)
.+++ ...+|..||++|++||
T Consensus 433 ~~~~~~~~~~~p~~g~~~~~~V~~viv~G~~v~ 465 (467)
T 1xrt_A 433 EETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVY 465 (467)
T ss_dssp TTTCCSSCCCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred hHHccCcCCCCCccCCEEeEEEEEEEECCEEEe
Confidence 1111 1458999999999997
No 36
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.98 E-value=2.9e-30 Score=266.17 Aligned_cols=189 Identities=17% Similarity=0.125 Sum_probs=129.1
Q ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecc
Q 008063 361 QVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQP 440 (579)
Q Consensus 361 ~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p 440 (579)
.....+.+.++++.+++.+.++.+|..+.......++.. .....+.......................
T Consensus 202 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (403)
T 3mtw_A 202 QQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRAG------------VDTIEHASLVDDEGIKLAVQKGAYFSMDI 269 (403)
T ss_dssp BCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTT------------CSEEEECTTCCHHHHHHHHHHTCEEECCC
T ss_pred cccCHHHHHHHHHHHHHcCCeEEEEeccchhHHHHHHhc------------ccccccccccccchhhhhccccceeeeee
Confidence 345788999999999999999999998776555443321 22344444444444444433333333222
Q ss_pred cccccchhHH---------HHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC-CCHHHHHHHHHcccCCCCCCCCCC
Q 008063 441 QHLLDDADSA---------RKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD-INPLCAIRTAMKRIPPGWDNAWIP 510 (579)
Q Consensus 441 ~~~~~~~~~~---------~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 510 (579)
.......... ......... ....+.+.+.+.|+.+.+|||.+... ...+..+..++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~gt~~~~~~~~~~~~~~~~~~~------------ 336 (403)
T 3mtw_A 270 YNTDYTQAEGKKNGVLEDNLRKDRDIGE-LQRENFRKALKAGVKMVYGTDAGIYPHGDNAKQFAVMVR------------ 336 (403)
T ss_dssp STHHHHHHHHHHHTCCHHHHHHHHHHHH-HHHHHHHHHHHHTCEEECCCCBTTBCTTCGGGHHHHHHH------------
T ss_pred ccchhhhhhhhccccchhhccccccccc-cccchhhHHHhcCCeEeeccCCcccccchHHHHHHHHHH------------
Confidence 2111000000 000011111 34456788889999999999987554 345555555443
Q ss_pred CCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEe
Q 008063 511 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQA 577 (579)
Q Consensus 511 ~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v 577 (579)
.|+|++|||+++|.|||++||+++++|+|++||.|||||||.||++++..+. +|..||++||+|
T Consensus 337 -~gls~~eal~~~T~npA~~lgl~~~~GsI~~G~~ADlvvld~dPl~di~~~~--~v~~Vi~~G~vv 400 (403)
T 3mtw_A 337 -YGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVTTLE--KPVFVMKGGAVV 400 (403)
T ss_dssp -TTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGGGGG--SCSEEEETTEEE
T ss_pred -cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcceEEEECCChhHhHhhhc--CcCEEEECCEEE
Confidence 3599999999999999999999998999999999999999999998877664 689999999987
No 37
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=99.98 E-value=2.1e-30 Score=276.25 Aligned_cols=363 Identities=20% Similarity=0.223 Sum_probs=224.6
Q ss_pred ccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 45 ~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
++++|+|++|+++++ ...++|+|+||||++|++..+ ...++||++|++|+|||||+|+|+..++.
T Consensus 23 ~~~~i~~~~v~~~~~--~~~~~v~i~~g~I~~i~~~~~------~~~~~id~~g~~v~PG~iD~H~H~~~~g~------- 87 (473)
T 3e74_A 23 FDLIIKNGTVILENE--ARVVDIAVKGGKIAAIGQDLG------DAKEVMDASGLVVSPGMVDAHTHISEPGR------- 87 (473)
T ss_dssp EEEEEESCEEECSSC--EEECEEEEETTEEEEEESCCC------CEEEEEECTTCEEEECEEEEEECC------------
T ss_pred CCEEEEeeEEECCCC--ceeeeEEEECCEEEEEcCCCC------CCCcEEECCCCEEecCEEEEecccCCCCC-------
Confidence 468999999999876 367899999999999997532 22689999999999999999999854321
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
T Consensus 88 -------------------------------------------------------------------------------- 87 (473)
T 3e74_A 88 -------------------------------------------------------------------------------- 87 (473)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCC-cCCCCCccccchHHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFG-RYYPGESVQLSWEDF 283 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~-~~~~~~~~~~~~~~~ 283 (579)
...+.+....+.+++.|+|++.++. ...+.. ...+..
T Consensus 88 ---------------------------------------~~~~~~~~~~~~~~~~G~Tt~~~~~~~t~p~~---~~~~~~ 125 (473)
T 3e74_A 88 ---------------------------------------SHWEGYETGTRAAAKGGITTMIEMPLNQLPAT---VDRASI 125 (473)
T ss_dssp -------------------------------------------CHHHHHHHHHHTTEEEEEECCSSSSSCS---CSHHHH
T ss_pred ---------------------------------------CcHHHHHHHHHHHHhCCEEEEEcCcccCCCCc---ccHHHH
Confidence 0011234456678999999999986 332222 233333
Q ss_pred HHHHHHHhhcCCCeeEEEEcc--CccchhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCccc
Q 008063 284 ADVYQWASYSEKMKIRVCLFF--PLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQ 361 (579)
Q Consensus 284 ~~~~~~~~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~ 361 (579)
....+...... .+++..+. ......+..+.... + ..++|++...... ...+.+..
T Consensus 126 ~~~~~~a~~~~--~~d~~~~~~~~~~~~~~l~~l~~~-G--------~~~~K~~~~~~~~------------~~~~~~~~ 182 (473)
T 3e74_A 126 ELKFDAAKGKL--TIDAAQLGGLVSYNIDRLHELDEV-G--------VVGFKCFVATCGD------------RGIDNDFR 182 (473)
T ss_dssp HHHHHHHTTTC--SSEEEECEECCTTCTTTHHHHHHH-T--------CSCEEEEC------------------------C
T ss_pred HHHHHHhccCC--eEEEEEEeecccchHHHHHHHHHc-C--------CCEEEEeccccCC------------cccccccC
Confidence 33333333322 34444432 22233333333322 1 1245555331100 00001223
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecchHHHHH---------------------------HHHHHHHHHHhcCCCCCCce
Q 008063 362 VMELESLLSMTMASDKSGLQVAIHAIGDRANDL---------------------------VLDMYKSVVVTTGKRDQRFR 414 (579)
Q Consensus 362 ~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~ 414 (579)
..+++.+.++++.+++.|.++.+|+........ .++......... +.+.+
T Consensus 183 ~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~---g~~lh 259 (473)
T 3e74_A 183 DVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVA---GCRLH 259 (473)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHH---TCCEE
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHh---CCcEE
Confidence 368899999999999999999999985422211 111111112222 35777
Q ss_pred EeeccCCCh-hhHHHHhhCC--cEEEecccccccchhHHHH------hhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC
Q 008063 415 IEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDWPVA 485 (579)
Q Consensus 415 i~H~~~~~~-~~~~~~~~~~--i~~~~~p~~~~~~~~~~~~------~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~ 485 (579)
+.|...... +.++++++.| +++.+||++.....+.+.. ..++.|.......+...++.|++++++||....
T Consensus 260 i~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tDh~p~ 339 (473)
T 3e74_A 260 VCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPC 339 (473)
T ss_dssp ECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCCBCCC
T ss_pred EEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 778664222 3444455544 6778899988766665543 234444435566788889999999999997544
Q ss_pred CCC---------------HHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEE
Q 008063 486 DIN---------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 550 (579)
Q Consensus 486 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvv 550 (579)
... .-..+...+... ....+++++++++++|.|||+++|+++ +|+|++|+.|||||
T Consensus 340 ~~~~k~~~f~~~~~G~~g~e~~l~~~~~~~--------~~~~~~~~~~~~~~~t~~~a~~~g~~~-~G~l~~G~~AD~vv 410 (473)
T 3e74_A 340 PPEMKAGNIMKAWGGIAGLQSCMDVMFDEA--------VQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDADFVF 410 (473)
T ss_dssp CTTTTCSCTTTSCCCBCCGGGHHHHHHHHH--------TTTTCCCHHHHHHHHTHHHHHHTTCTT-SSCCSTTSBCCEEE
T ss_pred CHHHcccChhhcCCCcccHHhHHHHHHHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCccCEEE
Confidence 321 111121111111 134569999999999999999999985 79999999999999
Q ss_pred eCCC-CCC-Chhhcc-------------CCeEEEEEECCEEeCC
Q 008063 551 LSTS-SWE-DFAAEV-------------SASIEATYVSGVQAYP 579 (579)
Q Consensus 551 ld~~-~~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 579 (579)
+|.+ ++. +.+++. ..+|..||++|++||.
T Consensus 411 ~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~v~G~~v~~ 454 (473)
T 3e74_A 411 IQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYD 454 (473)
T ss_dssp EESSCCEECCGGGCCSSSCCCTTTTCEESCEEEEEEETTEEEEE
T ss_pred EeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEECCEEEEe
Confidence 9966 332 222221 4579999999999973
No 38
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.98 E-value=1.3e-31 Score=282.37 Aligned_cols=168 Identities=14% Similarity=0.065 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchH-HHHHHHHHH------------------------------HHHHHhcCCCCC
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMY------------------------------KSVVVTTGKRDQ 411 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~-~~~~~~~~~------------------------------~~~~~~~~~~~~ 411 (579)
++++.++++++.|++.|+++.+|+.++. ++...++.+ .+.....+..+.
T Consensus 218 ~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 297 (420)
T 2imr_A 218 VSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAA 297 (420)
T ss_dssp BCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGG
T ss_pred cCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCC
Confidence 5789999999999999999999997553 444443321 112233455556
Q ss_pred CceEeeccCCChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC--CCCCH
Q 008063 412 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV--ADINP 489 (579)
Q Consensus 412 ~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~--~~~~~ 489 (579)
+..+.|+.++++++++++++.|+.+++||.++. .++ ...++++.++++|+++++|||++. ...++
T Consensus 298 ~~~i~H~~~l~~~~i~~l~~~g~~~~~~p~~~~--------~~~-----~~~~~l~~~~~~Gv~~~lgtD~~~~~~~~~~ 364 (420)
T 2imr_A 298 RPTLVHMVNVTPDDIARVARAGCAVVTCPRSNH--------HLE-----CGTFDWPAFAAAGVEVALGTDSVASGETLNV 364 (420)
T ss_dssp CCEEEECCSCCHHHHHHHHHHTCCEEECHHHHH--------HTT-----CCCCCHHHHHHTTCCEEECCCCHHHHSCSCT
T ss_pred CeEEEecCcCCHHHHHHHHHcCCeEEECHHHHH--------Hhc-----cCCCCHHHHHHCCCeEEEECCCCccCCCCCH
Confidence 789999999999999999999999999998653 222 345688999999999999999853 24678
Q ss_pred HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCC
Q 008063 490 LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS 555 (579)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~ 555 (579)
+.+++.++.+ ..+++++++|+++|.|||++||+++++|+|++||.||| |+|.++
T Consensus 365 ~~~~~~~~~~-----------~~~ls~~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~~ 418 (420)
T 2imr_A 365 REEVTFARQL-----------YPGLDPRVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELSR 418 (420)
T ss_dssp HHHHHHHHHH-----------CTTSCHHHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGCC
T ss_pred HHHHHHHHhc-----------CCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECCC
Confidence 8888887642 13699999999999999999999988999999999999 777664
No 39
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=99.98 E-value=3.4e-31 Score=279.59 Aligned_cols=205 Identities=19% Similarity=0.131 Sum_probs=135.5
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHH----------------------H---HHHHHHHHHH---hcCCCCCCce
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRAND----------------------L---VLDMYKSVVV---TTGKRDQRFR 414 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~----------------------~---~~~~~~~~~~---~~~~~~~~~~ 414 (579)
.+.+.+.++++.|+++|+++.+|+.++.... + +.+.++.+.. ..+ .+.+..
T Consensus 152 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~-~g~~~~ 230 (426)
T 2z00_A 152 EDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSP-ATPRLH 230 (426)
T ss_dssp CCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCS-SCCCEE
T ss_pred CCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCccchhcccccCChHHHHHHHHHHHHHHhhcccccc-CCCcEE
Confidence 6889999999999999999999998765432 1 1111111111 112 356788
Q ss_pred EeeccCCC-hhhHHHHhhCCc--EEEecccccccchhHHHH------hhChhhhhhhhhhHHHHHHCCCeeeecCCC-CC
Q 008063 415 IEHAQHLA-SGTAARFGDQGI--VASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDW-PV 484 (579)
Q Consensus 415 i~H~~~~~-~~~~~~~~~~~i--~~~~~p~~~~~~~~~~~~------~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~-~~ 484 (579)
+.|+.... .+.++++++.|+ .+++||.++..+.+.... ..++.+.......+...++.|+++++|||+ +.
T Consensus 231 i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~lgsD~~p~ 310 (426)
T 2z00_A 231 VQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPH 310 (426)
T ss_dssp ETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEECCCBCCC
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCCcEEEecCCCCC
Confidence 99998643 366677777764 566799887654433211 122222112233556677799999999996 44
Q ss_pred CCC---CHHH-----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEE
Q 008063 485 ADI---NPLC-----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 550 (579)
Q Consensus 485 ~~~---~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvv 550 (579)
... +++. .+...+.. +....++|++++++++|.|||+++|++ +|+|+|||.|||||
T Consensus 311 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~~ADlvv 380 (426)
T 2z00_A 311 TLAEKEKDLLRAPFGIPSLEVAFPLLYTE--------LHLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGAEASLVL 380 (426)
T ss_dssp CTTGGGSCTTTSCCCBCCTTTHHHHHHHH--------THHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTSBCCEEE
T ss_pred CHHHccCChhhCCCCcccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCCCCCEEE
Confidence 321 1110 00000000 002235999999999999999999996 89999999999999
Q ss_pred eCCCCCC-Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 551 LSTSSWE-DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 551 ld~~~~~-~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
+|.+++. +.+.+. ..+|..||++|++||
T Consensus 381 ~d~~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~t~v~G~~v~ 422 (426)
T 2z00_A 381 LSPKERPVDPSAFASKARYSPWAGWVLGGWPVLTLVAGRIVH 422 (426)
T ss_dssp EECCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEE
T ss_pred EeCCcEEEcHHHccccCCCCCcCCCEEEEEEEEEEECCEEEE
Confidence 9998765 444432 369999999999997
No 40
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.97 E-value=4.5e-30 Score=267.38 Aligned_cols=176 Identities=20% Similarity=0.185 Sum_probs=127.8
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEec-------chHHHHHHHHHHHHHHHhcCCCCCCceEeeccC----CChhhHHHHhh
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAI-------GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH----LASGTAARFGD 431 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~----~~~~~~~~~~~ 431 (579)
++++.+.++++.|+++|+++.+|+. +...+...++ .| ...+.|+.. .+++.++++++
T Consensus 171 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~~~~~--------~G----~~~i~H~~~~~~~~~~~~~~~~~~ 238 (386)
T 2vun_A 171 KNPEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVIK--------TK----PDVVSHINGGPTAISVQEVDRIMD 238 (386)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHHH--------HC----CSEEETTTCSSSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCeEEEecCCccccccCHHHHHHHHH--------cC----CCEEEEccCCCCCCCHHHHHHHHH
Confidence 4688999999999999999999994 2233332221 23 236899988 88999999999
Q ss_pred CCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCCCCC-CC----CHHHHHHHHHcccCCCC
Q 008063 432 QGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVA-DI----NPLCAIRTAMKRIPPGW 504 (579)
Q Consensus 432 ~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~~~~-~~----~~~~~~~~~~~~~~~~~ 504 (579)
.|+.+..++. .. . .. ....+++.+++.|+ +++++||++.. +. ++..+++.+.
T Consensus 239 ~g~~vl~~~~-~g-~-----------~~-~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~------- 297 (386)
T 2vun_A 239 ETDFAMEIVQ-CG-N-----------PK-IADYVARRAAEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIAS------- 297 (386)
T ss_dssp HCCCEEEEES-SS-C-----------HH-HHHHHHHHHHHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHH-------
T ss_pred cCCeEEEecc-CC-c-----------cc-ccHHHHHHHHHcCCCceeEEecCCCCCCCCCcchhHHHHHHHHh-------
Confidence 9987733222 10 0 11 44557899999999 99999998522 11 2333443322
Q ss_pred CCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC----Chhhcc---CCeEEEEEECCEEe
Q 008063 505 DNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFAAEV---SASIEATYVSGVQA 577 (579)
Q Consensus 505 ~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~----~~~~~~---~~~v~~v~v~G~~v 577 (579)
+.+++++++++++|.|||+++|+ + +|+|++||.|||||+|.++.. .+.++. ..+|..||++|++|
T Consensus 298 ------~~~ls~~~~~~~~T~n~A~~lgl-~-~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 369 (386)
T 2vun_A 298 ------MSDIDPEVAVCMATGNSTAVYGL-N-TGVIAPGKEADLIIMDTPLGSVAEDAMGAIAAGDIPGISVVLIDGEAV 369 (386)
T ss_dssp ------HSCCCHHHHHHHHTHHHHHHHTC-S-CSSCSTTSBCCEEEEECBTTCSCSSHHHHHHHTCCCEEEEEEETTEEE
T ss_pred ------hcCCCHHHHHHHHhHHHHHHcCC-C-ceeeCCCCeeCEEEECCCcccccchhHHHhhccCCCceeEEEECCEEE
Confidence 24699999999999999999999 4 899999999999999998832 122221 24899999999998
Q ss_pred CC
Q 008063 578 YP 579 (579)
Q Consensus 578 ~~ 579 (579)
+.
T Consensus 370 ~~ 371 (386)
T 2vun_A 370 VT 371 (386)
T ss_dssp ES
T ss_pred ee
Confidence 63
No 41
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=99.97 E-value=3.7e-30 Score=275.10 Aligned_cols=357 Identities=18% Similarity=0.197 Sum_probs=221.7
Q ss_pred ccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 45 ~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
|+++|+|++|+++++. ..++|+|+||||++|++.. .+.++||++|++|+|||||+|+|+..++..
T Consensus 1 m~~~i~~~~v~~~~~~--~~~~v~I~~G~I~~i~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~~~~~------ 65 (490)
T 3dc8_A 1 MSTVIKGGTIVTADLT--YKADVKVEGGRIVEIGPNL-------SGAETLDATGCYVMPGGIDPHTHLEMPFMG------ 65 (490)
T ss_dssp -CEEEESCEEECSSCE--EECEEEEETTEEEEEESSC-------CCSEEEECTTCEEEECEEEEEECTTCEETT------
T ss_pred CcEEEEccEEECCCCc--eeeeEEEECCEEEEeccCC-------CCCeEEECCCCEEecCEEeeccccCCCCCC------
Confidence 5789999999998765 6779999999999999752 257899999999999999999998543210
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
...
T Consensus 66 ---------------------------------------~~~-------------------------------------- 68 (490)
T 3dc8_A 66 ---------------------------------------TYS-------------------------------------- 68 (490)
T ss_dssp ---------------------------------------EEC--------------------------------------
T ss_pred ---------------------------------------CCC--------------------------------------
Confidence 000
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~ 284 (579)
.+.+....+.+++.|+|++.++.... +........
T Consensus 69 -----------------------------------------~e~~~~~~~aa~~~GvTtv~~~~~~~----p~~~~~~~~ 103 (490)
T 3dc8_A 69 -----------------------------------------SDDFESGTRAALAGGTTMVVDFALPS----PGQSLLEAL 103 (490)
T ss_dssp -----------------------------------------SCCHHHHHHHHHHTTEEEEEEEECCC-----CCCHHHHH
T ss_pred -----------------------------------------HHHHHHHHHHHHHcCEEeecccCCCC----CCcCHHHHH
Confidence 00123355667899999999986432 222333333
Q ss_pred HHHHHHhhcCCCeeEEEEccCccc-----hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCc
Q 008063 285 DVYQWASYSEKMKIRVCLFFPLET-----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYG 359 (579)
Q Consensus 285 ~~~~~~~~~~~~~i~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~ 359 (579)
+.+..... ...+++..+..... ..+..+..... ...++|++.+. . +
T Consensus 104 ~~~~~~a~--~~~~d~~~~~~~~~~~~~~l~el~~l~~~~--------G~~~~k~~~~~-------------~------~ 154 (490)
T 3dc8_A 104 TMWDNKST--RANCDYSFHMAITWWGEQVFNEMETIVKDK--------GINTFKHFMAY-------------K------G 154 (490)
T ss_dssp HHHHHHTT--TCSSEEEEEEECCSCSHHHHHHHHHHHHHS--------CCCEEEEESCS-------------T------T
T ss_pred HHHHHHhh--cccceeeeEEEEecCcHHHHHHHHHHHHhC--------CCCEEEEEecC-------------C------C
Confidence 43333332 33444444332222 11222222110 11234544211 0 1
Q ss_pred ccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHH------------------------HHHHHHHhcCCCCCCceE
Q 008063 360 LQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD------------------------MYKSVVVTTGKRDQRFRI 415 (579)
Q Consensus 360 ~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~i 415 (579)
...++++.+.++++.+++.|.++.+|+.....+....+ ............+.+.++
T Consensus 155 ~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi 234 (490)
T 3dc8_A 155 ALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYI 234 (490)
T ss_dssp TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 22358899999999999999999999875433221111 111111100112357778
Q ss_pred eeccCCCh-hhHHHHhhC--CcEEEecccccccchhHH----------HHhhChhhhhhhhhhHHHHHHCCCeeeecCCC
Q 008063 416 EHAQHLAS-GTAARFGDQ--GIVASMQPQHLLDDADSA----------RKKLGVDRAERESYLFQSLLANNALLALGSDW 482 (579)
Q Consensus 416 ~H~~~~~~-~~~~~~~~~--~i~~~~~p~~~~~~~~~~----------~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~ 482 (579)
.|...... +.++..++. .+++.+||++.....+.+ ....++.|.......+...++.|.+.+++||.
T Consensus 235 ~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh 314 (490)
T 3dc8_A 235 VHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDH 314 (490)
T ss_dssp SSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCB
T ss_pred EeCCCHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCC
Confidence 88654221 333444444 467788898765444332 12344555546666788888999999999997
Q ss_pred CCCCCCH---------------------HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCcccccc
Q 008063 483 PVADINP---------------------LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 541 (579)
Q Consensus 483 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~ 541 (579)
+....+. +..+... +....+++++++++++|.|||+++|+++.+|+|+
T Consensus 315 ~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~-----------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~ 383 (490)
T 3dc8_A 315 CAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTY-----------GVATGRITMNEFVAVTSTNIAKILNIYPKKGAIL 383 (490)
T ss_dssp CCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHH-----------HTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCS
T ss_pred CCCCHHHhhccCCChhhCCCChHHHHHHHHHHHHH-----------HHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccC
Confidence 5432110 1111111 0135669999999999999999999977799999
Q ss_pred CCCcccEEEeCCC-CCC-Chhhc-------------cCCeEEEEEECCEEeC
Q 008063 542 PGKIADFVILSTS-SWE-DFAAE-------------VSASIEATYVSGVQAY 578 (579)
Q Consensus 542 ~G~~ADlvvld~~-~~~-~~~~~-------------~~~~v~~v~v~G~~v~ 578 (579)
+|+.|||||||.+ ++. +.+++ ...+|..||++|++||
T Consensus 384 ~G~~ADlvv~d~~~~~~i~~~~~~s~~~~sp~~g~~~~g~v~~t~~~G~~v~ 435 (490)
T 3dc8_A 384 VGADADLVVWDPKRSKTISAKTQQSAIDYNVFEGKTVTGLPRFTLTRGVVSI 435 (490)
T ss_dssp TTSBCCEEEEEEEEEEECCTTTCSSSSSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred CCCcCCEEEEecCcceEechhhccccCCCCcccCcEEeeEEEEEEECCEEEE
Confidence 9999999999977 222 11111 1458999999999997
No 42
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=99.97 E-value=2.6e-30 Score=280.51 Aligned_cols=208 Identities=16% Similarity=0.113 Sum_probs=131.4
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHH------------------------HHHHHHHhcCCCCCCceEeec
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD------------------------MYKSVVVTTGKRDQRFRIEHA 418 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~i~H~ 418 (579)
++.+.+.++++.|+++|+++.+|+.....+....+ ...+........+.+.++.|+
T Consensus 176 ~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~la~~~g~~vhi~H~ 255 (559)
T 2fty_A 176 ISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHV 255 (559)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEECSC
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 68899999999999999999999976544433211 111111111112446677776
Q ss_pred cCCC-hhhHHHHhhCC--cEEEecccccccchhHH------------------------------------HHhhChhhh
Q 008063 419 QHLA-SGTAARFGDQG--IVASMQPQHLLDDADSA------------------------------------RKKLGVDRA 459 (579)
Q Consensus 419 ~~~~-~~~~~~~~~~~--i~~~~~p~~~~~~~~~~------------------------------------~~~l~~~~~ 459 (579)
..-. .+.++++++.| +++.+||.+...+.+.+ ....++.|.
T Consensus 256 s~~~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~ 335 (559)
T 2fty_A 256 SSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRP 335 (559)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCC
T ss_pred CCHHHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccccccccCccccccccccccCccccccCcEECCCCCC
Confidence 4311 12333444566 55688998654332211 011122232
Q ss_pred hhhhhhHHHHHHCCCeeeecCCCCCCCCC--------------------HHH---------HHHHH--HcccCCCCCCCC
Q 008063 460 ERESYLFQSLLANNALLALGSDWPVADIN--------------------PLC---------AIRTA--MKRIPPGWDNAW 508 (579)
Q Consensus 460 ~~~~~~l~~l~~~Gi~v~~gsD~~~~~~~--------------------~~~---------~~~~~--~~~~~~~~~~~~ 508 (579)
.....++..+++.|+++++|||.+....+ .+. +++.. +...
T Consensus 336 ~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l~~ll~~~-------- 407 (559)
T 2fty_A 336 EGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYG-------- 407 (559)
T ss_dssp TTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHT--------
T ss_pred HHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHHHHHHHHH--------
Confidence 23445688899999999999997543321 111 11111 1111
Q ss_pred CCCCCC-CHHHHHHHHcHHHHHhcccCCccccccCC-CcccEEEeCCCC---------CC-Chhhcc-------------
Q 008063 509 IPSERI-SLTDALIAHTLSAARACFLENDVGSLSPG-KIADFVILSTSS---------WE-DFAAEV------------- 563 (579)
Q Consensus 509 ~~~~~l-s~~~al~~~T~npA~~lgl~~~~G~I~~G-~~ADlvvld~~~---------~~-~~~~~~------------- 563 (579)
.....+ +++++++++|.|||++||+++.+|+|++| +.|||||||.+. +. +..++.
T Consensus 408 v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~s~~~~sp~~g~~~ 487 (559)
T 2fty_A 408 YLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEI 487 (559)
T ss_dssp TTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTGGGTSSCSCCTTTTCBC
T ss_pred HHcCCCCCHHHHHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEchHHhcccCCCCCccCCEe
Confidence 123458 99999999999999999997678999999 999999999884 43 322222
Q ss_pred CCeEEEEEECCEEeC
Q 008063 564 SASIEATYVSGVQAY 578 (579)
Q Consensus 564 ~~~v~~v~v~G~~v~ 578 (579)
..+|..||++|++||
T Consensus 488 ~g~v~~t~v~G~~v~ 502 (559)
T 2fty_A 488 KNWPRYTIVKGKIVY 502 (559)
T ss_dssp SCCEEEEEETTEEEE
T ss_pred cceEEEEEECCEEEE
Confidence 347999999999997
No 43
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=99.97 E-value=1e-29 Score=270.96 Aligned_cols=208 Identities=15% Similarity=0.101 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHH------------------------HHHHhcCCCCCCceEeec
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYK------------------------SVVVTTGKRDQRFRIEHA 418 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~i~H~ 418 (579)
.+++.+.++++.|++.+.++++|+.....++...+.+. +.....+..+.+.++.|+
T Consensus 160 ~~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~ 239 (458)
T 1gkp_A 160 VDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHL 239 (458)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 67899999999999999999999965444433322211 111101112345566665
Q ss_pred cCCC-hhhHHHHhhCCcE--EEecccccccchhHH------HH---hhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC
Q 008063 419 QHLA-SGTAARFGDQGIV--ASMQPQHLLDDADSA------RK---KLGVDRAERESYLFQSLLANNALLALGSDWPVAD 486 (579)
Q Consensus 419 ~~~~-~~~~~~~~~~~i~--~~~~p~~~~~~~~~~------~~---~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~ 486 (579)
.... .+.++.+++.|+. +.+||.+........ .. ..++.|.......+..+++.|+++++|||.....
T Consensus 240 ~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~ 319 (458)
T 1gkp_A 240 SCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFD 319 (458)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCC
T ss_pred CCHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCC
Confidence 4321 2457778888864 468887432211111 00 1123332233445678999999999999975432
Q ss_pred CC-------HHH-----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccE
Q 008063 487 IN-------PLC-----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADF 548 (579)
Q Consensus 487 ~~-------~~~-----------~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADl 548 (579)
.+ .+. .+...+.+. ....++|++++++++|.|||++||+++++|+|++||.|||
T Consensus 320 ~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~--------~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 391 (458)
T 1gkp_A 320 TEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYG--------VSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADL 391 (458)
T ss_dssp HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHH--------TTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCE
T ss_pred HHHhhcccCChhhCCCCcccHHHHHHHHHHHH--------HHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCE
Confidence 11 110 111111111 0123499999999999999999999877999999999999
Q ss_pred EEeCCCCCC--C------------hhhc-cCCeEEEEEECCEEeC
Q 008063 549 VILSTSSWE--D------------FAAE-VSASIEATYVSGVQAY 578 (579)
Q Consensus 549 vvld~~~~~--~------------~~~~-~~~~v~~v~v~G~~v~ 578 (579)
||+|.++.. + +..+ ...+|..||++|++||
T Consensus 392 vv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~v~v~G~~v~ 436 (458)
T 1gkp_A 392 VVYDPQYRGTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAV 436 (458)
T ss_dssp EEEETTCCEECCGGGCCSSSSCCTTTTCEESCEEEEEEETTEEEE
T ss_pred EEEeCCCCeEEchHHcccccCCCccCCCEEeeEEEEEEECCEEEE
Confidence 999988642 1 1111 1347999999999986
No 44
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=7.5e-30 Score=268.91 Aligned_cols=350 Identities=18% Similarity=0.243 Sum_probs=215.6
Q ss_pred EEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccccccCC
Q 008063 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (579)
Q Consensus 47 ~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~~~ 126 (579)
++|+|++|++ .+ ....++|+|+||||++|++..+. +++.++||++|++|+|||||+|+|+...+..
T Consensus 2 ~~i~~~~v~~-~~-~~~~~~v~i~~g~I~~i~~~~~~----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~-------- 67 (424)
T 3gri_A 2 KLIKNGKVLQ-NG-ELQQADILIDGKVIKQIAPAIEP----SNGVDIIDAKGHFVSPGFVDVHVHLREPGGE-------- 67 (424)
T ss_dssp EEEESCEEEE-TT-EEEECEEEEETTEEEEEESCCCC----CSSCEEEECTTCEEEECEEEEEECCCTTTCT--------
T ss_pred EEEEeeEEEc-CC-CceeeeEEEECCEEEEecCCCCC----CCCCeEEECCCCEEEeCeEEeeecCCCCCCC--------
Confidence 7899999999 33 44778999999999999975431 2467899999999999999999998643210
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCCCC
Q 008063 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (579)
Q Consensus 127 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~~~ 206 (579)
.
T Consensus 68 ---------------------------------------~---------------------------------------- 68 (424)
T 3gri_A 68 ---------------------------------------Y---------------------------------------- 68 (424)
T ss_dssp ---------------------------------------T----------------------------------------
T ss_pred ---------------------------------------C----------------------------------------
Confidence 0
Q ss_pred CCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHHHH
Q 008063 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (579)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~~~ 286 (579)
.+.+....+.+++.|+|++.++....+.. ...+.....
T Consensus 69 ---------------------------------------~~~~~~~~~~~~~~G~t~~~~~~~~~~~~---~~~~~~~~~ 106 (424)
T 3gri_A 69 ---------------------------------------KETIETGTKAAARGGFTTVCPMPNTRPVP---DSVEHFEAL 106 (424)
T ss_dssp ---------------------------------------TCCHHHHHHHHHHTTEEEEEECSCSSSCS---CSHHHHHHH
T ss_pred ---------------------------------------HHHHHHHHHHHHhCCEEEEeECcCCCCCC---ChHHHHHHH
Confidence 00123356667999999999986432222 223333344
Q ss_pred HHHHhhcCCCeeEEEEccCccc------hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcc
Q 008063 287 YQWASYSEKMKIRVCLFFPLET------WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGL 360 (579)
Q Consensus 287 ~~~~~~~~~~~i~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~ 360 (579)
.+.+...+. .++..+..... ..+..+.... |...+.+ .+.
T Consensus 107 ~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~l~~~------------G~~~~~~--------------------~~~ 152 (424)
T 3gri_A 107 QKLIDDNAQ--VRVLPYASITTRQLGKELVDFPALVKE------------GAFAFTD--------------------DGV 152 (424)
T ss_dssp HHHHHHHCS--SEECCCEESBGGGCSSSBCCHHHHHTT------------TCCCEEE--------------------CSS
T ss_pred HHHhccCCC--ceEEEEEEEecCCCcchHHHHHHHHhc------------CcEEEec--------------------CCc
Confidence 444443332 23322211111 1112222110 0000000 012
Q ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEecchHH-------------------------HHHHHHHHHHHHHhcCCCCCCceE
Q 008063 361 QVMELESLLSMTMASDKSGLQVAIHAIGDRA-------------------------NDLVLDMYKSVVVTTGKRDQRFRI 415 (579)
Q Consensus 361 ~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~i 415 (579)
...+++.+.++++.++++|.++.+|+..... ...+.+.+. ..... +.+.++
T Consensus 153 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~-la~~~---g~~~~i 228 (424)
T 3gri_A 153 GVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVL-LAEAA---GCHYHV 228 (424)
T ss_dssp CCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHH-HHHHH---TCCEEE
T ss_pred CcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHH-HHHHh---CCcEEE
Confidence 2367899999999999999999999974321 111111111 11222 347788
Q ss_pred eeccCCCh-hhHHHHhhCC--cEEEecccccccchhHH------HHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC
Q 008063 416 EHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSA------RKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD 486 (579)
Q Consensus 416 ~H~~~~~~-~~~~~~~~~~--i~~~~~p~~~~~~~~~~------~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~ 486 (579)
.|+..... +.++..++.| +.+.+||++.....+.+ ....++.|.......+...++.|+..++|||+....
T Consensus 229 ~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~~ 308 (424)
T 3gri_A 229 CHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHA 308 (424)
T ss_dssp CSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCCC
T ss_pred EeCCCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCC
Confidence 88753222 3344444444 67788998775443322 122344444455667888899999999999974332
Q ss_pred CC---------------HHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEe
Q 008063 487 IN---------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVIL 551 (579)
Q Consensus 487 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvl 551 (579)
.+ .-..+...+.. +....+++++++++++|.|||+++|+ .+|+|++|+.|||||+
T Consensus 309 ~~~k~~~~~~~~~G~~g~e~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~--~~g~l~~G~~Ad~~~~ 378 (424)
T 3gri_A 309 RDEKAQPMEKAPFGIVGSETAFPLLYTH--------FVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTII 378 (424)
T ss_dssp HHHHTSCTTTSCCCCCCTTTHHHHHHHH--------HTTTSSCCHHHHHHHHTHHHHHHTTC--SCSCCCTTSBCCEEEE
T ss_pred HHHccCCHhHCCCCCccccccHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHhCC--CCCcccCCCcCCEEEE
Confidence 10 00011111110 11345699999999999999999999 3799999999999999
Q ss_pred CCC-CCC-Chhhcc-------------CCeEEEEEECCEEeCC
Q 008063 552 STS-SWE-DFAAEV-------------SASIEATYVSGVQAYP 579 (579)
Q Consensus 552 d~~-~~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 579 (579)
|.+ ++. +.+++. ..+|..||++|++||.
T Consensus 379 d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~ 421 (424)
T 3gri_A 379 DLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFE 421 (424)
T ss_dssp ESSCCEECCGGGCSSSCCCCTTTTCEESCEEEEEEETTEEEEE
T ss_pred cCCCCEEEchhhcccccCCCCcCCCEEeeeEEEEEECCEEEEe
Confidence 988 333 323222 4689999999999973
No 45
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.97 E-value=1.2e-30 Score=271.49 Aligned_cols=181 Identities=14% Similarity=0.101 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHCCCeEEE-Eecc-hHHHHHHHHHHHHHHHhc--CCCC---------------CCc---eEeeccCCChh
Q 008063 367 SLLSMTMASDKSGLQVAI-HAIG-DRANDLVLDMYKSVVVTT--GKRD---------------QRF---RIEHAQHLASG 424 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~i-H~~g-~~~~~~~~~~~~~~~~~~--~~~~---------------~~~---~i~H~~~~~~~ 424 (579)
.+.++++.|+++|+++.+ |+.+ ..++...++......... +... .+. .+.|+.+++++
T Consensus 176 ~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~~ 255 (382)
T 1yrr_A 176 VPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYA 255 (382)
T ss_dssp SCHHHHHHHHHTTCEEEECSCCCCHHHHHHHHHHTCCEESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCHH
T ss_pred ChHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHcCCCeeEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCHH
Confidence 345788999999999998 9984 444555544321111100 0000 012 68899999999
Q ss_pred hHHHHhhCC-cEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCee-eecCCCCCCCCCHHHHHHHHHcccCC
Q 008063 425 TAARFGDQG-IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALL-ALGSDWPVADINPLCAIRTAMKRIPP 502 (579)
Q Consensus 425 ~~~~~~~~~-i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v-~~gsD~~~~~~~~~~~~~~~~~~~~~ 502 (579)
+++++++.+ ..+.+++......+ +....-....++.+++.|+++ ..|||.+ ...+++.+++.++..
T Consensus 256 ~~~~~~~~~~~~~~~~~d~~~~~g--------~~~~~~~~~~~~~~~~~Gv~~~~~Gt~~g-~~~~~~~~~~~~~~~--- 323 (382)
T 1yrr_A 256 NIRNAKRLKGDKLCLVTDATAPAG--------ANIEQFIFAGKTIYYRNGLCVDENGTLSG-SSLTMIEGVRNLVEH--- 323 (382)
T ss_dssp HHHHHHHHHGGGEEEECCBCTTTT--------SCCSEEEETTEEEEECSSCEECTTCCEEE-BCCCHHHHHHHHHHH---
T ss_pred HHHHHHHcCCCcEEEECcChHhcC--------CCCceEEECCEEEEEECCEEEeCCCcCcC-CccCHHHHHHHHHHH---
Confidence 999988876 55556665543111 000000011245677899987 5677753 346889999887742
Q ss_pred CCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEeC
Q 008063 503 GWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 503 ~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
.+++++++|+++|.|||++||+++++|+|+|||.|||||+|.|+ +|..||++|++||
T Consensus 324 ---------~g~~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~~----------~v~~v~~~G~~v~ 380 (382)
T 1yrr_A 324 ---------CGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDF----------KITKTIVNGNEVV 380 (382)
T ss_dssp ---------HCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTS----------CEEEEEETTEEEE
T ss_pred ---------hCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCCCCEEEECCCC----------CEEEEEECCEEEE
Confidence 25899999999999999999999889999999999999999875 7999999999987
No 46
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=99.97 E-value=5.9e-30 Score=270.28 Aligned_cols=351 Identities=20% Similarity=0.255 Sum_probs=216.7
Q ss_pred ccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCcccccccc
Q 008063 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (579)
Q Consensus 45 ~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~~~~ 124 (579)
|+++|+|++|++..+ ....++|+|+||||++|++..+ +++.++||++|++|+|||||+|+|+...+..
T Consensus 1 m~~~i~~~~v~~~~~-~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~------ 68 (428)
T 3mpg_A 1 MNYLFKNGRYMNEEG-KIVATDLLVQDGKIAKVAENIT-----ADNAEVIDVNGKLIAPGLVDVHVHLREPGGE------ 68 (428)
T ss_dssp CEEEEEEEEEECSSS-CEEEEEEEEESSBEEECCSSCC-----CTTSEEEECTTCEEEECEEEEEECCCTTTCT------
T ss_pred CcEEEEeeEEEeCCC-CeeeeeEEEECCEEEEecCCCC-----CCCCeEEECCCCEEeeCEEEEeeccCCCCCC------
Confidence 578999999998544 4577899999999999997543 2467899999999999999999998543210
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCCCCC
Q 008063 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (579)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~~~~ 204 (579)
.
T Consensus 69 -----------------------------------------~-------------------------------------- 69 (428)
T 3mpg_A 69 -----------------------------------------H-------------------------------------- 69 (428)
T ss_dssp -----------------------------------------T--------------------------------------
T ss_pred -----------------------------------------c--------------------------------------
Confidence 0
Q ss_pred CCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHH
Q 008063 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (579)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~ 284 (579)
.+.+....+.+.+.|+|++.++....+.. ...+...
T Consensus 70 -----------------------------------------~~~~~~~~~~~~~~GvTt~~~~~~~~~~~---~~~~~~~ 105 (428)
T 3mpg_A 70 -----------------------------------------KETIETGTLAAAKGGFTTICAMPNTRPVP---DCREHME 105 (428)
T ss_dssp -----------------------------------------TCCHHHHHHHHHHHTEEEEEECSCSSSCS---CSHHHHH
T ss_pred -----------------------------------------hhHHHHHHHHHHhCCeEEEEeCCCCCCCC---CcHHHHH
Confidence 00123356678999999999986432222 2233333
Q ss_pred HHHHHHhhcCCCeeEEEEccCccc------hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCC
Q 008063 285 DVYQWASYSEKMKIRVCLFFPLET------WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNY 358 (579)
Q Consensus 285 ~~~~~~~~~~~~~i~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~ 358 (579)
...+......... +..+..... ..+..+.... |...+.+ .
T Consensus 106 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~l~~~------------G~~~~~~--------------------~ 151 (428)
T 3mpg_A 106 DLQNRIKEKAHVN--VLPYGAITVRQAGSEMTDFETLKEL------------GAFAFTD--------------------D 151 (428)
T ss_dssp HHHHHHHHHCSSE--EEECEESBGGGCSSSBCCHHHHHHT------------TCCCEEC--------------------T
T ss_pred HHHHHhcccCCcE--EEEEeeEecCCCcchHHHHHHHHHh------------CCEEEEC--------------------C
Confidence 4444444444222 222211111 1112222111 0000000 0
Q ss_pred cccCCCHHHHHHHHHHHHHCCCeEEEEecchHH-------------------------HHHHHHHHHHHHHhcCCCCCCc
Q 008063 359 GLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-------------------------NDLVLDMYKSVVVTTGKRDQRF 413 (579)
Q Consensus 359 ~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~ 413 (579)
+....+++.+.++++.++++|.++.+|+..... ...+.+.+. ..... +.+.
T Consensus 152 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~-la~~~---g~~~ 227 (428)
T 3mpg_A 152 GVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDIL-LAEAA---DCHY 227 (428)
T ss_dssp TSCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHH-HHHHH---TCCE
T ss_pred CcCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHH-HHHHh---CCCE
Confidence 122367899999999999999999999974310 011111111 11112 3477
Q ss_pred eEeeccCCCh-hhHHHHhhCC--cEEEecccccccchhHH------HHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCC
Q 008063 414 RIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSA------RKKLGVDRAERESYLFQSLLANNALLALGSDWPV 484 (579)
Q Consensus 414 ~i~H~~~~~~-~~~~~~~~~~--i~~~~~p~~~~~~~~~~------~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~ 484 (579)
.+.|+..... +.++.+++.| +.+.+||.+.....+.+ .+..++.|......++..+++.|+..+++||.+.
T Consensus 228 ~i~H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~p 307 (428)
T 3mpg_A 228 HVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAP 307 (428)
T ss_dssp EECSCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBCC
T ss_pred EEEeCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCCC
Confidence 7888764222 3445555555 56677887765333221 1233444444556678888999999999999764
Q ss_pred CCCCHH---------------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEE
Q 008063 485 ADINPL---------------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFV 549 (579)
Q Consensus 485 ~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlv 549 (579)
...+.. ..+...+.. +....+++++++++++|.|||++||++ +|+|++|+.||||
T Consensus 308 ~~~~~k~~~~~~~p~g~~g~e~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~~Ad~~ 377 (428)
T 3mpg_A 308 HTAEEKAQGIERAPFGITGFETAFPLLYTN--------LVKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTADIT 377 (428)
T ss_dssp CCTTGGGSCTTTSCSCCCCTTTHHHHHHHH--------TTTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTSBCCEE
T ss_pred CCHHHcccCHhhCCCCceehhhHHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCCcCCEE
Confidence 432110 011111111 113356999999999999999999997 7999999999999
Q ss_pred EeCCCC-CC-Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 550 ILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 550 vld~~~-~~-~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
|+|.+. +. +.+++. ..+|..||++|++||
T Consensus 378 ~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~ 421 (428)
T 3mpg_A 378 IIDLEQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAW 421 (428)
T ss_dssp EEESSCCEECCGGGCSSSCCCCSCTTCEECCEEEEEEETTEEEE
T ss_pred EEcCCCCEEEchhhccccCCCCCcCCCEEeeEEEEEEECCEEEE
Confidence 999764 22 222211 347999999999987
No 47
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=99.97 E-value=1.8e-29 Score=268.25 Aligned_cols=156 Identities=19% Similarity=0.203 Sum_probs=100.2
Q ss_pred CCceEeeccCCChhhHHHHhh------CCcEEEecccccccchhHHHH------hhChhhhhhhhhhHHHHHHCCCeeee
Q 008063 411 QRFRIEHAQHLASGTAARFGD------QGIVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLAL 478 (579)
Q Consensus 411 ~~~~i~H~~~~~~~~~~~~~~------~~i~~~~~p~~~~~~~~~~~~------~l~~~~~~~~~~~l~~l~~~Gi~v~~ 478 (579)
.+.++.|+. +.+.++.+++ ..+.+.++|++...+.+.+.. ..++.+......+++.++++|+++++
T Consensus 236 ~~v~i~H~~--~~~~~~~~~~~~a~~~~~v~~~~~~h~~~l~~~~~~~~g~~~~~~P~lr~~~~~~~l~~~l~~Gv~~~l 313 (452)
T 2gwn_A 236 ARLHILHLS--TEKELSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREALRAAVRNGRIDII 313 (452)
T ss_dssp CCEEECCCC--CTGGGGGSCCSSCGGGCSEEEEEEHHHHHCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHSSSCEE
T ss_pred CCEEEEeCC--CHHHHHHHHHhhcccCCCeEEEEchHHhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHHHCCCceEE
Confidence 456666766 3344444333 246666677665443333321 11111222356688999999999999
Q ss_pred cCCCCCCCC-----CHHH--------HH--HHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCC
Q 008063 479 GSDWPVADI-----NPLC--------AI--RTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 543 (579)
Q Consensus 479 gsD~~~~~~-----~~~~--------~~--~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G 543 (579)
|||++.... +.+. ++ ...+... ...+++++++++++|.|||++||++ .+|+|++|
T Consensus 314 gTD~~~~~~~~k~~~~~~~~~g~~~~e~~~~~~~~~~---------~~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~G 383 (452)
T 2gwn_A 314 ATDHAPHLLREKEGSCLQAASGGPLVQHSLLALLELC---------NQGIFSIEEIVSKTAHIPATLFAIE-KRGYIRPG 383 (452)
T ss_dssp ECCBCCCCHHHHCSCTTTSCCCCCCTTTHHHHHHHHH---------HTTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCTT
T ss_pred EeCCCCCChHHhcCChhhCCCCCccHHHHHHHHHHHH---------HcCCCCHHHHHHHHhHhHHHHcCCC-CCCcccCC
Confidence 999753321 1111 11 0111100 1346999999999999999999998 58999999
Q ss_pred CcccEEEeCCCCC-C-Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 544 KIADFVILSTSSW-E-DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 544 ~~ADlvvld~~~~-~-~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
|.|||||+|.++. . +..++. ..+|..||++|++||
T Consensus 384 ~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~ 433 (452)
T 2gwn_A 384 YYADLVLVDPSSPHTVSADNILSLCGWSPFEGFTFSHSVAYTFVNGCLAY 433 (452)
T ss_dssp SBCCEEEEETTSCEECCTTTCCSTTCCCTTTTCEESCEEEEEEETTEEEE
T ss_pred CcCCEEEEcCCCCeEECHHHccccCCCCCCCCcEEeeeEEEEEECCEEEE
Confidence 9999999999853 2 222221 458999999999986
No 48
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.97 E-value=6.2e-30 Score=269.22 Aligned_cols=176 Identities=13% Similarity=0.098 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHH-HHHHHHHHHHHHHhcCCCCCCceEeeccCCCh-----------hhHHHHh
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRA-NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-----------GTAARFG 430 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-----------~~~~~~~ 430 (579)
++.+.+.+.++.+++.|+++.+|+..... .+.....+ .....+.|+....+ +++.+++
T Consensus 186 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l----------~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~ 255 (417)
T 2ogj_A 186 WGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEIL----------GPGDVVTHCFNGKSGSSIMEDEDLFNLAERCA 255 (417)
T ss_dssp CTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHC----------CTTCEEETTTCCCTTTCTTSCHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHh----------cCCCEEEeccCCCccchhccCHHHHHHHHHHH
Confidence 46678888999999999999999964221 22222221 11368889876443 4777788
Q ss_pred hCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCC-CeeeecCCCCCCC-C-----CHHHHHHHHHcccCCC
Q 008063 431 DQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVAD-I-----NPLCAIRTAMKRIPPG 503 (579)
Q Consensus 431 ~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~G-i~v~~gsD~~~~~-~-----~~~~~~~~~~~~~~~~ 503 (579)
+.|+.+.++|.... ....+++.+.++| +++++|||.+ .+ . .....+...+.
T Consensus 256 ~~g~~v~~~~~~~~----------------~~~~~~~~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~~~----- 313 (417)
T 2ogj_A 256 GEGIRLDIGHGGAS----------------FSFKVAEAAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKLLS----- 313 (417)
T ss_dssp -CCCEEECCBCSSS----------------CCHHHHHHHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHHHH-----
T ss_pred hcCcEEEecCCCcc----------------ccchHHHHHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHHHH-----
Confidence 88988887776432 1133678999999 9999999976 32 1 22233322221
Q ss_pred CCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC----Chh-hcc----CCeEEEEEECC
Q 008063 504 WDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFA-AEV----SASIEATYVSG 574 (579)
Q Consensus 504 ~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~----~~~-~~~----~~~v~~v~v~G 574 (579)
.+++++++++++|.|||+.||+++ +|+|+|||.|||||+|.+... ++. ... ..+|..||++|
T Consensus 314 --------~~l~~~~al~~~T~n~A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~g~~~~~~~~~~v~~t~v~G 384 (417)
T 2ogj_A 314 --------VDMPFENVVEAVTRNPASVIRLDM-ENRLDVGQRADFTVFDLVDADLEATDSNGDVSRLKRLFEPRYAVIGA 384 (417)
T ss_dssp --------TTCCHHHHHHTTTHHHHHHTTCCC-SSTTSTTSBCEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETT
T ss_pred --------cCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcccEEEEecccCCceecCCCCceEecccccceEEEEECC
Confidence 359999999999999999999998 899999999999999976421 111 111 23899999999
Q ss_pred EEeCC
Q 008063 575 VQAYP 579 (579)
Q Consensus 575 ~~v~~ 579 (579)
++||.
T Consensus 385 ~~v~~ 389 (417)
T 2ogj_A 385 EAIAA 389 (417)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99874
No 49
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=99.97 E-value=3.6e-29 Score=266.59 Aligned_cols=202 Identities=17% Similarity=0.163 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHH------------------------HH---HHHhcCCCCCCceE
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMY------------------------KS---VVVTTGKRDQRFRI 415 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~------------------------~~---~~~~~~~~~~~~~i 415 (579)
.+.+.+.++++.+++.+.++.+|+.....++..++.+ ++ ..... +.+.++
T Consensus 159 ~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~---g~~~~~ 235 (457)
T 1nfg_A 159 IDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIV---NAPIYI 235 (457)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHH---TCCEEE
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHH---CCCEEE
Confidence 4678888899999999999999987544333332211 11 11112 335566
Q ss_pred eeccCCChhhHHHH---hhCC--cEEEecccccccchhHHHH---------hhChhhhhhhhhhHHHHHHCCCeeeecCC
Q 008063 416 EHAQHLASGTAARF---GDQG--IVASMQPQHLLDDADSARK---------KLGVDRAERESYLFQSLLANNALLALGSD 481 (579)
Q Consensus 416 ~H~~~~~~~~~~~~---~~~~--i~~~~~p~~~~~~~~~~~~---------~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD 481 (579)
.|+. +.+.++.+ ++.| +.+.++|++.....+.... ..++.+......++..+++.|+++++|||
T Consensus 236 ~H~~--~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD 313 (457)
T 1nfg_A 236 VHVT--CEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSD 313 (457)
T ss_dssp CCCC--SHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECC
T ss_pred EeCC--cHHHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecC
Confidence 6765 33333333 3445 4555566654322222110 11112222345678889999999999999
Q ss_pred CCCCCCC--------HHH---------H--HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccC
Q 008063 482 WPVADIN--------PLC---------A--IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSP 542 (579)
Q Consensus 482 ~~~~~~~--------~~~---------~--~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~ 542 (579)
....... .+. + +...+... ...+++++++++++|.|||++||+++.+|+|++
T Consensus 314 ~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~~---------~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~ 384 (457)
T 1nfg_A 314 HCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGV---------NEGRISLTQFVELVATRPAKVFGMFPQKGTIAV 384 (457)
T ss_dssp BCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHHH---------HTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCST
T ss_pred CCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHHHHH---------HcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCC
Confidence 7533211 111 1 11111100 123599999999999999999999877999999
Q ss_pred CCcccEEEeCCCCCC--Chhhcc-------------CCeEEEEEECCEEeC
Q 008063 543 GKIADFVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAY 578 (579)
Q Consensus 543 G~~ADlvvld~~~~~--~~~~~~-------------~~~v~~v~v~G~~v~ 578 (579)
||.|||||+|.++.. +..++. ..+|..||++|++||
T Consensus 385 G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~ 435 (457)
T 1nfg_A 385 GSDADIVLWDPEAEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIV 435 (457)
T ss_dssp TSBCCEEEEEEEEEEECCGGGSCSSCSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred CCccCEEEEeCCCCEEecHHHccCCCCCCCccCCEecceEEEEEECCEEEE
Confidence 999999999988632 111111 238999999999986
No 50
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=99.97 E-value=6.1e-29 Score=267.91 Aligned_cols=214 Identities=14% Similarity=0.097 Sum_probs=126.4
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHH------------------------HHHHHHHHhcCCCCCCceEeec
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVL------------------------DMYKSVVVTTGKRDQRFRIEHA 418 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~i~H~ 418 (579)
.+.+.+.++++.|++++.++.+|+.....+...+ ..++.........+.+.++.|+
T Consensus 187 ~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~h~ 266 (501)
T 2vm8_A 187 LTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKV 266 (501)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 6789999999999999999999998643222111 1111111110012446788887
Q ss_pred cCCC-hhhHHHHhhCCcEEE--ecccccccchhHH-------H---HhhChhhhh-hhhhhHHHHHHCCCeeeecCCCCC
Q 008063 419 QHLA-SGTAARFGDQGIVAS--MQPQHLLDDADSA-------R---KKLGVDRAE-RESYLFQSLLANNALLALGSDWPV 484 (579)
Q Consensus 419 ~~~~-~~~~~~~~~~~i~~~--~~p~~~~~~~~~~-------~---~~l~~~~~~-~~~~~l~~l~~~Gi~v~~gsD~~~ 484 (579)
.... .+.++..++.|+.+. .+|.+...+...+ . +..++.|.+ ....++..+++.|+.+++|||.+.
T Consensus 267 ~~~~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~~~ 346 (501)
T 2vm8_A 267 MSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCT 346 (501)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCC
T ss_pred CcHHHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecCCC
Confidence 6322 233445577786542 2222221111110 0 011222221 235567789999999999999643
Q ss_pred CCCCHHHHHHH--HHcccCCC---CCC-------CCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeC
Q 008063 485 ADINPLCAIRT--AMKRIPPG---WDN-------AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILS 552 (579)
Q Consensus 485 ~~~~~~~~~~~--~~~~~~~~---~~~-------~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld 552 (579)
.. ....+.. .......+ .+. .+....+++++++++++|.|||++||+++.+|+|++||.|||||+|
T Consensus 347 ~~--~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 424 (501)
T 2vm8_A 347 FN--TAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWD 424 (501)
T ss_dssp CC--HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEE
T ss_pred CC--hhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEc
Confidence 22 1111100 00000000 000 0113456999999999999999999998779999999999999999
Q ss_pred CCCCC--Chhhc-------------cCCeEEEEEECCEEeC
Q 008063 553 TSSWE--DFAAE-------------VSASIEATYVSGVQAY 578 (579)
Q Consensus 553 ~~~~~--~~~~~-------------~~~~v~~v~v~G~~v~ 578 (579)
.++.. +..++ ....|..||++|++||
T Consensus 425 ~~~~~~~~~~~~~s~~~~~~~~g~~~~~~v~~v~v~G~~v~ 465 (501)
T 2vm8_A 425 PDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVL 465 (501)
T ss_dssp EEEEEECCTTTSSSSCSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred CCCCeeeccccccccccCCCccCcEeCceEEEEEECCEEEE
Confidence 88632 11111 1347899999999986
No 51
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.96 E-value=8e-29 Score=256.64 Aligned_cols=191 Identities=14% Similarity=0.128 Sum_probs=121.6
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEeccc
Q 008063 362 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQ 441 (579)
Q Consensus 362 ~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~ 441 (579)
..+.......+..+.+.+.....+............ .+ .....+...............+......+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (426)
T 3mkv_A 211 GYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVR--------CG----VRTIEHGNLIDDETARLVAEHGAYVVPTLV 278 (426)
T ss_dssp CSCHHHHHHHHHHHHTTTCCEEEEECSHHHHHHHHH--------TT----CCEEEECTTCCHHHHHHHHHHTCEEECCHH
T ss_pred hhhHHHHHHHHHHHHhcccceeehhhhhhhHHHHHh--------hc----cccccccccccchhhhhhhhcCcccccccc
Confidence 356667777777777788777777654332222111 11 223444444444455555555554444332
Q ss_pred ccccch---------hHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCC
Q 008063 442 HLLDDA---------DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSE 512 (579)
Q Consensus 442 ~~~~~~---------~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (579)
...... ............ ....+...+.+.|+.+.+++|....+......+...+. .
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~g~d~~~~~~~~~~~~~~~~~-------------~ 344 (426)
T 3mkv_A 279 TYDALASEGEKYGLPPESIAKIADVHG-AGLHSIEIMKRAGVKMGFGTDLLGEAQRLQSDEFRILA-------------E 344 (426)
T ss_dssp HHHHHHHHTTTTTCCHHHHTTHHHHHT-THHHHHHHHHHHTCCBCCCCCCCGGGGGGTTHHHHHHH-------------T
T ss_pred chhhhhhhhhhcccccccccccccccc-ccchhhHHhhhcCceeeeccCCcccccchHHHHHHHHH-------------h
Confidence 211000 000000001111 44556778889999999999987655443333333332 2
Q ss_pred CCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhcc--CCeEEEEEECCEEeC
Q 008063 513 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEV--SASIEATYVSGVQAY 578 (579)
Q Consensus 513 ~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~--~~~v~~v~v~G~~v~ 578 (579)
++|++|||+++|.|||++||+++++|+|+|||.|||||||.||++++..+. ..+|..||++||+|.
T Consensus 345 gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~ADlvvlD~dPl~di~~~~~~~~~v~~Vi~~G~vv~ 412 (426)
T 3mkv_A 345 VLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVDCLLGQGEHIPLVMKDGRLFV 412 (426)
T ss_dssp TSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCSTTTCSSSTTCCEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcceEEEECCChHHhHHHHhCCCCCccEEEECCEEEE
Confidence 589999999999999999999998999999999999999999998665442 447999999999874
No 52
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.96 E-value=7.8e-29 Score=257.28 Aligned_cols=177 Identities=15% Similarity=0.090 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHH-CCCeEEEEecc-hHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCCh------------hhHHH
Q 008063 363 MELESLLSMTMASDK-SGLQVAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS------------GTAAR 428 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~-~g~~i~iH~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~------------~~~~~ 428 (579)
++.+.+.+.++.|++ .|+++.+|+.. ....++..+.++. + ..+.|+..... +++.+
T Consensus 165 ~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~~~-----g-----~~~~H~~~~~~~~~~~~s~~~~~~~~~~ 234 (379)
T 2ics_A 165 NGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEK-----G-----DVLTHCFNGKENGILDQATDKIKDFAWQ 234 (379)
T ss_dssp CTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCT-----T-----CEEESTTCCSTTSSEETTTTEECHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHhhc-----C-----CeeeeccCCCccchhhccCHHHHHHHHH
Confidence 456788899999999 99999999964 2223333332211 1 36677765433 78888
Q ss_pred HhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCC-CeeeecCCCCCC-----C-CCHHHHHHHHHcccC
Q 008063 429 FGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVA-----D-INPLCAIRTAMKRIP 501 (579)
Q Consensus 429 ~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~G-i~v~~gsD~~~~-----~-~~~~~~~~~~~~~~~ 501 (579)
+++.|+.++++|.+... ...+++.+++.| ++++++||.+.. + ......+...+.
T Consensus 235 ~~~~g~~~~~~p~~~~~----------------~~~~~~~~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~~~--- 295 (379)
T 2ics_A 235 AYNKGVVFDIGHGTDSF----------------NFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKLRV--- 295 (379)
T ss_dssp HHHTTCEEECCCTTTSC----------------CHHHHHHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHHHH---
T ss_pred HHHcCCEEEecCCCCCc----------------CHHHHHHHHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHHHH---
Confidence 88999999999875431 123567889999 889999997411 1 222333332221
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCC----Chh-hccCC----eEEEEEE
Q 008063 502 PGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFA-AEVSA----SIEATYV 572 (579)
Q Consensus 502 ~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~----~~~-~~~~~----~v~~v~v 572 (579)
.+++++++++++|.|||++||+++ +|+|+|||.|||||+|.+.+. ++. ..... +|..||+
T Consensus 296 ----------~~ls~~~~~~~~T~n~A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~g~~~~~~~~~~v~~t~v 364 (379)
T 2ics_A 296 ----------VGYDWPEIIEKVTKAPAENFHLTQ-KGTLEIGKDADLTIFTIQAEEKTLTDSNGLTRVAKEQIRPIKTII 364 (379)
T ss_dssp ----------HTCCHHHHHHTTTHHHHHHTTCTT-SSSCCTTSBCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ----------cCCCHHHHHHHHHHHHHHHhCCCC-CcCCCCCCccCEEEEecccccceeecCCCCEEEeeeeeeeEEEEE
Confidence 259999999999999999999987 899999999999999864431 111 11133 8999999
Q ss_pred CCEEeCC
Q 008063 573 SGVQAYP 579 (579)
Q Consensus 573 ~G~~v~~ 579 (579)
+|++||.
T Consensus 365 ~G~~v~~ 371 (379)
T 2ics_A 365 GGQIYDN 371 (379)
T ss_dssp TTEEEEC
T ss_pred CCEEEec
Confidence 9999974
No 53
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.95 E-value=2.2e-27 Score=258.92 Aligned_cols=322 Identities=20% Similarity=0.200 Sum_probs=200.8
Q ss_pred CCCccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCccccc
Q 008063 42 NLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMAR 121 (579)
Q Consensus 42 ~~~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~~~~~ 121 (579)
..+++++|+|++|+++.......++|+|+||||++|++... . +++.++||++|++|+|||||+|+|+..+..
T Consensus 32 ~~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~--~--~~~~~vID~~G~~v~PG~ID~H~Hl~~~~~---- 103 (608)
T 3nqb_A 32 DQRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPAS--R--RDAAQVIDAGGAYVSPGLIDTHMHIESSMI---- 103 (608)
T ss_dssp SSCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTS--C--CCEEEEEECTTSEEEECEEEEEECGGGGTS----
T ss_pred CCCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCC--C--CCCCeEEeCCCCEEecCeEecccCcccccC----
Confidence 45678999999999987666677899999999999997541 1 246789999999999999999999853210
Q ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCCCCCCCChHHhhhhCCCCeEEEEeCCCchhhhcHHHHHHcCC
Q 008063 122 VKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (579)
Q Consensus 122 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~ld~~~~~~p~~~~~~~~~~~~~n~~~~~~~g~ 201 (579)
T Consensus 104 -------------------------------------------------------------------------------- 103 (608)
T 3nqb_A 104 -------------------------------------------------------------------------------- 103 (608)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCeEEeCCCCCcCEEEhHhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchH
Q 008063 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (579)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~ 281 (579)
......+.++..|+|++.+.....+ +..
T Consensus 104 ----------------------------------------------~~~~~~~~al~~GvTtvv~~p~~~~------~v~ 131 (608)
T 3nqb_A 104 ----------------------------------------------TPAAYAAAVVARGVTTIVWDPHEFG------NVH 131 (608)
T ss_dssp ----------------------------------------------CHHHHHHHHHTTTEEEEEECCHHHH------HHH
T ss_pred ----------------------------------------------CHHHHHHHHHhCCeEEEEcCCcccc------ccC
Confidence 0012356788999999997532100 111
Q ss_pred HHHHHHHHHhhcCCCeeEEEEcc----Cc-cc---------hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccc
Q 008063 282 DFADVYQWASYSEKMKIRVCLFF----PL-ET---------WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALF 347 (579)
Q Consensus 282 ~~~~~~~~~~~~~~~~i~v~~~~----~~-~~---------~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~ 347 (579)
........+......+++++... +. .. .++..++... -...+++.+.+.
T Consensus 132 g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~--------~~v~glgE~~~~--------- 194 (608)
T 3nqb_A 132 GVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSW--------PEIGGIAEIMNM--------- 194 (608)
T ss_dssp THHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTS--------TTEEEEEEECCH---------
T ss_pred CHHHHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhc--------cCcceeeEeecc---------
Confidence 11112222222334455555433 11 00 1112222111 012223222110
Q ss_pred cCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHH
Q 008063 348 HEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAA 427 (579)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~ 427 (579)
.......+.+.+.++.|++.|.++.+|+.+... ..++.+.. .+ ....|+....++..+
T Consensus 195 -----------~~v~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~--~~L~~~~~----aG-----v~~~H~~~~~eea~e 252 (608)
T 3nqb_A 195 -----------RGVIERDPRMSGIVQAGLAAEKLVCGHARGLKN--ADLNAFMA----AG-----VSSDHELVSGEDLMA 252 (608)
T ss_dssp -----------HHHHTTCHHHHHHHHHHHHHTCEEEECCTTCCH--HHHHHHHH----TT-----CCEECCCCSHHHHHH
T ss_pred -----------CCcCCCcHHHHHHHHHHHHcCCEEEEcCCCCCH--HHHHHHHH----cC-----CCeeeccCCHHHHHH
Confidence 001124577889999999999999999975432 22222222 22 234898887776666
Q ss_pred HHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC-----CCHHHHHHHHHcccCC
Q 008063 428 RFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD-----INPLCAIRTAMKRIPP 502 (579)
Q Consensus 428 ~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~-----~~~~~~~~~~~~~~~~ 502 (579)
+++ .|..+.+. .+...... .....++.+...|++++++||..... .+....++.++.
T Consensus 253 ~l~-~G~~i~i~-gs~~~~~~------------~l~~~i~~~~~~g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~~---- 314 (608)
T 3nqb_A 253 KLR-AGLTIELR-GSHDHLLP------------EFVAALNTLGHLPQTVTLCTDDVFPDDLLQGGGLDDVVRRLVR---- 314 (608)
T ss_dssp HHH-TTCEEEEE-SSSGGGHH------------HHHHHHHHHTSCCTTEEEECBSCCHHHHHHTCSHHHHHHHHHH----
T ss_pred HHH-CCCEEEEe-ccccccHH------------HHHHHHHhHhhcCceEEEecCCCCCcchhhhcchHHHHHHHHH----
Confidence 665 68888776 43321111 11111121223899999999963110 123334444432
Q ss_pred CCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEeC
Q 008063 503 GWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 503 ~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
.|++++++++++|.|||+++|+++ +|+|+||+.||||++|. + + ..++..||++|++|+
T Consensus 315 ---------~Gls~~eal~~aT~n~A~~lgl~~-~G~i~~G~~ADlvv~d~--l---~---~~~v~~v~~~G~~v~ 372 (608)
T 3nqb_A 315 ---------YGLKPEWALRAATLNAAQRLGRSD-LGLIAAGRRADIVVFED--L---N---GFSARHVLASGRAVA 372 (608)
T ss_dssp ---------TTCCHHHHHHHHTHHHHHHHTCTT-SSCCSTTSBCCEEEESC--T---T---TCCEEEEEETTEEEE
T ss_pred ---------cCCCHHHHHHHHHHHHHHHcCCCC-CcCcCCCCCccEEEECC--C---C---CCcceEEEECCEEEE
Confidence 269999999999999999999964 89999999999999995 1 1 337999999999986
No 54
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.95 E-value=1e-27 Score=267.32 Aligned_cols=107 Identities=18% Similarity=0.130 Sum_probs=76.7
Q ss_pred hhHHHHHHCCCeeeecCCCCCCCC--CH----HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCcc
Q 008063 464 YLFQSLLANNALLALGSDWPVADI--NP----LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDV 537 (579)
Q Consensus 464 ~~l~~l~~~Gi~v~~gsD~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~ 537 (579)
.....+.+.|+..+++||...... .. +........... ..........+++++++|+++|+|||+.||+++++
T Consensus 616 a~~~ll~dlGvi~~isSD~~p~~~~~e~~~~~~~~a~~~~~~~g-~~~~e~~~~~~Lsl~eAIr~aTiNPAraLGLddr~ 694 (840)
T 4gy7_A 616 AAEDVLNDIGAISIISSDSQAMGRVGEVISRTWQTADKMKAQTG-PLKCDSSDNDNFRIRRYIAKYTINPAIANGFSQYV 694 (840)
T ss_dssp HHHHHHHHTTSSCEEECCBTTTBCGGGHHHHHHHHHHHHHHHHC-SCTTSCSSCCHHHHHHHHHTTTHHHHHHHTCTTTS
T ss_pred hHHHHHHhCCCeEEEeccccccccccccchhhhcccccchhhcc-cchhhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 345667789999999999754431 11 111111111100 01122234567999999999999999999999999
Q ss_pred ccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEeC
Q 008063 538 GSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 538 G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
|+|+|||.|||||||...| ..++..|+++|++||
T Consensus 695 GSIEpGK~ADLVLfDPa~F-------GvKPe~Vik~G~Iv~ 728 (840)
T 4gy7_A 695 GSVEVGKLADLVMWKPSFF-------GTKPEMVIKGGMVAW 728 (840)
T ss_dssp SSSCTTSBCCEEEECGGGT-------TTCCSEEEETTEEEE
T ss_pred cccCCCCcceEEEECchHc-------CCCCeEEEECCEEEE
Confidence 9999999999999985443 458899999999997
No 55
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.95 E-value=2e-27 Score=255.60 Aligned_cols=70 Identities=30% Similarity=0.521 Sum_probs=56.1
Q ss_pred ccCCCccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccc
Q 008063 40 TTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (579)
Q Consensus 40 ~~~~~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~ 114 (579)
.+..+|+++|+|++|+++.+.....++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+..
T Consensus 16 ~~~~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~iD~~g~~v~PG~iD~H~H~~~ 85 (496)
T 1rk6_A 16 PDATPFDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-----SSARRRIDVAGKVVSPGFIDSHTHDDN 85 (496)
T ss_dssp ----CBSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-----SCBSCEEECTTCEEEECEEESSCCCTT
T ss_pred CCCCcccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-----CCCCeEEeCCCCEEecCEeeeeecCCc
Confidence 3455678999999999987655577899999999999987532 244679999999999999999999854
No 56
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=99.95 E-value=3.4e-27 Score=254.99 Aligned_cols=214 Identities=15% Similarity=0.075 Sum_probs=123.7
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHH------------------------HHHhcCCCCCCceEeec
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKS------------------------VVVTTGKRDQRFRIEHA 418 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~i~H~ 418 (579)
++.+.+.++++.|+++|.++.+|+.....+...++.+.+ ........+.+.++.|+
T Consensus 169 ~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi~h~ 248 (521)
T 2ftw_A 169 VTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYIVHV 248 (521)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 688999999999999999999999754322222221110 00000001234556665
Q ss_pred cC-CChhhHHHHhhCCcEE--EecccccccchhHH----------HHhhChhhh-hhhhhhHHHHHHCCCeeeecCCCCC
Q 008063 419 QH-LASGTAARFGDQGIVA--SMQPQHLLDDADSA----------RKKLGVDRA-ERESYLFQSLLANNALLALGSDWPV 484 (579)
Q Consensus 419 ~~-~~~~~~~~~~~~~i~~--~~~p~~~~~~~~~~----------~~~l~~~~~-~~~~~~l~~l~~~Gi~v~~gsD~~~ 484 (579)
.. ...+.++++++.|+.+ ..+|.+...+...+ ....++.|. .+....+..+++.|...++|||.+.
T Consensus 249 ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~~~ 328 (521)
T 2ftw_A 249 QSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCT 328 (521)
T ss_dssp CCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCBCC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCCCC
Confidence 42 1123455677777653 33444332222111 001122221 1234456678899999999999643
Q ss_pred CCCCHHHHHH--HHHcccCC--CCCC--------CCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeC
Q 008063 485 ADINPLCAIR--TAMKRIPP--GWDN--------AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILS 552 (579)
Q Consensus 485 ~~~~~~~~~~--~~~~~~~~--~~~~--------~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld 552 (579)
.. ..+... ....+... .+.. .+....+++++++++++|.|||+++|+++++|+|++|+.|||||||
T Consensus 329 ~~--~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv~d 406 (521)
T 2ftw_A 329 FC--ADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVIWD 406 (521)
T ss_dssp CC--HHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEE
T ss_pred CC--HHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEEEe
Confidence 21 110000 00000000 0000 0113456999999999999999999998779999999999999999
Q ss_pred CCCCC--Chhhc-------------cCCeEEEEEECCEEeC
Q 008063 553 TSSWE--DFAAE-------------VSASIEATYVSGVQAY 578 (579)
Q Consensus 553 ~~~~~--~~~~~-------------~~~~v~~v~v~G~~v~ 578 (579)
.++.. ....+ ....|..||++|++||
T Consensus 407 ~~~~~~i~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~ 447 (521)
T 2ftw_A 407 PNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVW 447 (521)
T ss_dssp EEEEEECCTTTCCCSSSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred CCCCEEEChHHccccCCCCCcCCCEeeeeEEEEEECCEEEE
Confidence 87521 11111 1347899999999987
No 57
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=99.95 E-value=5.1e-27 Score=251.00 Aligned_cols=204 Identities=16% Similarity=0.156 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecch--HHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC-------hh---hHHHHh
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGD--RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-------SG---TAARFG 430 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~-------~~---~~~~~~ 430 (579)
.+.+++.++++.++++|.++.+|+... .....+.+.+.. .... +.+.++.|+.... .+ .++..+
T Consensus 196 ~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~a~~e~i~l-a~~~---g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~ 271 (480)
T 3gip_A 196 AQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAI-GRGT---GCATVVSHHKCMMPQNWGRSRATLANIDRAR 271 (480)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECSCSSTTHHHHHHHHHHH-HHHH---CCEEEETTCCCCSGGGTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCccccHHHHHHHHHHH-HHHh---CCCEEEEEEeccCccchhhHHHHHHHHHHHH
Confidence 578899999999999999999999742 222222222221 1222 3467788876432 33 334445
Q ss_pred hCC--cEEEecccccccchhHHHH------hh-------Chhhh-----------hhhhh------------------hH
Q 008063 431 DQG--IVASMQPQHLLDDADSARK------KL-------GVDRA-----------ERESY------------------LF 466 (579)
Q Consensus 431 ~~~--i~~~~~p~~~~~~~~~~~~------~l-------~~~~~-----------~~~~~------------------~l 466 (579)
+.| +.+.++|.+.......... .. ++.+. ..... .+
T Consensus 272 ~~G~~Vt~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~ 351 (480)
T 3gip_A 272 EQGVEVALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEV 351 (480)
T ss_dssp HTTCCEEEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHH
T ss_pred HcCCceEEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHH
Confidence 554 6777888776432100000 00 00000 00000 11
Q ss_pred HHHHHCCCeeeecCCCCCCCCC----HHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccC
Q 008063 467 QSLLANNALLALGSDWPVADIN----PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSP 542 (579)
Q Consensus 467 ~~l~~~Gi~v~~gsD~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~ 542 (579)
..+.+ +-...+|||+...... .+..+...+.... ....+++++++++++|.|||+.+|+++ +|+|++
T Consensus 352 ~~~~~-~~~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~~~t~~~a~~~g~~~-~G~l~~ 422 (480)
T 3gip_A 352 KRIFQ-HPCCMVGSDGLPNDARPHPRLWGSFTRVLGRYV-------REARLMTLEQAVARMTALPARVFGFAE-RGVLQP 422 (480)
T ss_dssp HHHHH-STTEEECCCCCTTCSSCCTHHHHHHHHHHHCCC-------CCTCSSCHHHHHHHHTHHHHHHHTCTT-CSSCST
T ss_pred HHHHc-CCCeEEecCCcccCCCCChhhhhhHHHHHHHHh-------hhcCCCCHHHHHHHHHHHHHHHcCCCC-CCccCC
Confidence 22333 3446778997654322 2333333332211 124569999999999999999999986 599999
Q ss_pred CCcccEEEeCCCCCCChhhc-----cCCeEEEEEECCEEeCC
Q 008063 543 GKIADFVILSTSSWEDFAAE-----VSASIEATYVSGVQAYP 579 (579)
Q Consensus 543 G~~ADlvvld~~~~~~~~~~-----~~~~v~~v~v~G~~v~~ 579 (579)
|+.|||||||.++..+...+ ....|..||++|++||.
T Consensus 423 G~~AD~vv~d~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 464 (480)
T 3gip_A 423 GAWADVVVFDPDTVADRATWDEPTLASVGIAGVLVNGAEVFP 464 (480)
T ss_dssp TSBCCEEEECTTTCBCCCCSSSTTCCCBSEEEEEETTEEEES
T ss_pred CCCCCEEEEcCccccCccccccccccCCCccEEEECCEEEEE
Confidence 99999999999874322211 23579999999999873
No 58
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=99.95 E-value=3.3e-26 Score=248.31 Aligned_cols=214 Identities=18% Similarity=0.115 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHH------------------------HHHhcCCCCCCceEeec
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKS------------------------VVVTTGKRDQRFRIEHA 418 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~i~H~ 418 (579)
++.+.+.++++.+++.+.++.+|+.....+...++.+.+ ........+.+.++.|+
T Consensus 192 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~~~~h~ 271 (541)
T 2vr2_A 192 VTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCPLYIVHV 271 (541)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 688999999999999999999999654322222211110 00000011235566666
Q ss_pred cC-CChhhHHHHhhCCcEE--EecccccccchhHH-----H-----HhhChhhh-hhhhhhHHHHHHCCCeeeecCCCCC
Q 008063 419 QH-LASGTAARFGDQGIVA--SMQPQHLLDDADSA-----R-----KKLGVDRA-ERESYLFQSLLANNALLALGSDWPV 484 (579)
Q Consensus 419 ~~-~~~~~~~~~~~~~i~~--~~~p~~~~~~~~~~-----~-----~~l~~~~~-~~~~~~l~~l~~~Gi~v~~gsD~~~ 484 (579)
.. ...+.++.+++.|+.+ ..+|.+...+...+ . ...++.|. .+....+.++++.|+..++|||.+.
T Consensus 272 ss~~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~gtD~~~ 351 (541)
T 2vr2_A 272 MSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCT 351 (541)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCCBCCBCC
T ss_pred CCHHHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEEEeCCCC
Confidence 42 1123344566677543 23333322111100 0 01112111 0233446778999999999999753
Q ss_pred CCCCHHHHHH--HHHcccCCC--C-CC-------CCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeC
Q 008063 485 ADINPLCAIR--TAMKRIPPG--W-DN-------AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILS 552 (579)
Q Consensus 485 ~~~~~~~~~~--~~~~~~~~~--~-~~-------~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld 552 (579)
. ...+... ....+...+ + +. .+....+++++++++++|.|||++||+++++|+|++|+.|||||||
T Consensus 352 ~--~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADlvv~d 429 (541)
T 2vr2_A 352 F--NTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWD 429 (541)
T ss_dssp C--CHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEE
T ss_pred C--ChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCEEEEc
Confidence 2 2211100 000000000 0 00 0013456999999999999999999998779999999999999999
Q ss_pred CCCCC--------------Chhhc-cCCeEEEEEECCEEeC
Q 008063 553 TSSWE--------------DFAAE-VSASIEATYVSGVQAY 578 (579)
Q Consensus 553 ~~~~~--------------~~~~~-~~~~v~~v~v~G~~v~ 578 (579)
.++.. +++.. ...+|..||++|++||
T Consensus 430 ~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~ 470 (541)
T 2vr2_A 430 PKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVY 470 (541)
T ss_dssp EEEEEECCTTTCSSSCSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred CCcCeEeCHHHhhcccCCCccCCCEEeeeEEEEEECCEEEE
Confidence 77531 11111 1346899999999987
No 59
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.95 E-value=3.6e-27 Score=246.33 Aligned_cols=177 Identities=18% Similarity=0.057 Sum_probs=115.6
Q ss_pred HHHHHHHHCCCeEEE-Eecc-hHHHHHHHHHHHHHHHh--cCCC---------------CCCc---eEeeccCCChhhHH
Q 008063 370 SMTMASDKSGLQVAI-HAIG-DRANDLVLDMYKSVVVT--TGKR---------------DQRF---RIEHAQHLASGTAA 427 (579)
Q Consensus 370 ~~~~~a~~~g~~i~i-H~~g-~~~~~~~~~~~~~~~~~--~~~~---------------~~~~---~i~H~~~~~~~~~~ 427 (579)
++++.++++|+++.+ |+.. ...+...++........ ++.. ..+. .+.|+.++++++++
T Consensus 186 ~~~~~a~~~g~~v~~gH~~~~~~~~~~a~~~G~~~i~H~~~~~~~~~~~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~ 265 (396)
T 2vhl_A 186 ELIRHLKDESIIASMGHTDADSALLSDAAKAGASHMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAK 265 (396)
T ss_dssp HHHHHHHHTTCEEEECSBCCCHHHHHHHHHTTCCEESSTTSSBCCCCSSSCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred HHHHHHHHCCCEEeecccCCCHHHHHHHHHcCCCEeEeCCccCcccccCCCCchhhhhcCCCcEEEEcCCccccCHHHHH
Confidence 567888999999988 9873 34344333210000000 0000 0122 56788888888888
Q ss_pred HHhhC-Cc-EEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC--CCCHHHHHHHHHcccCCC
Q 008063 428 RFGDQ-GI-VASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPG 503 (579)
Q Consensus 428 ~~~~~-~i-~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~--~~~~~~~~~~~~~~~~~~ 503 (579)
.+.+. +. .+..+|.+....+ +.+... ...++..+.+.| .+.+ +|+... ..+++.+++.++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~g------~~~~~~--~~~~~~~~~~~g-~~~~-~d~~~~g~~~~l~~~l~~~~~~---- 331 (396)
T 2vhl_A 266 LAFLAKGSSKLILITDSMRAKG------LKDGVY--EFGGQSVTVRGR-TALL-SDGTLAGSILKMNEGARHMREF---- 331 (396)
T ss_dssp HHHHHHCTTSEEEECCBCTTTT------SCSEEE--EETTEEEEEETT-EEEC-TTSCBCSBCCCHHHHHHHHHHH----
T ss_pred HHHhhcCCccEEEECcChhhcC------CCCceE--EECCeEEEEECC-EEEe-CCCcccccccCHHHHHHHHHHh----
Confidence 77765 54 5677776643110 010000 001233345667 6666 664333 25788888777642
Q ss_pred CCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEeC
Q 008063 504 WDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 504 ~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
.+++++++++++|.|||++||+++++|+|++||.|||||+|.+. +|..||++|++||
T Consensus 332 --------~~~~~~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~----------~v~~v~~~G~~v~ 388 (396)
T 2vhl_A 332 --------TNCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSDC----------EVILTICRGNIAF 388 (396)
T ss_dssp --------HCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTTC----------CEEEEEETTEEEE
T ss_pred --------cCCCHHHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECCCC----------cEEEEEECCEEEE
Confidence 24899999999999999999999879999999999999999762 7999999999986
No 60
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.94 E-value=3.5e-25 Score=226.29 Aligned_cols=71 Identities=24% Similarity=0.369 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCe
Q 008063 487 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSAS 566 (579)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~ 566 (579)
.+++..++.++. ..++++++|++|+|.|||+++|+++++|+|++||.||||+||.+. +
T Consensus 311 l~l~~~v~~~v~------------~~g~~~~~al~~aT~~pA~~lg~~~~~G~i~~G~~ADlvvld~~~----------~ 368 (381)
T 3iv8_A 311 LTMIEAVQNTVE------------HVGIALDEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRDF----------N 368 (381)
T ss_dssp CCHHHHHHHHHH------------TTCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTTC----------C
T ss_pred hhHHHHHHHHHH------------hhCCCHHHHHHHHHHHHHHHhCCCCCCceECCCCcCCEEEECCCC----------C
Confidence 567888887764 235999999999999999999999889999999999999999653 7
Q ss_pred EEEEEECCEEeCC
Q 008063 567 IEATYVSGVQAYP 579 (579)
Q Consensus 567 v~~v~v~G~~v~~ 579 (579)
|..||++|++||+
T Consensus 369 v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 369 VKATVVNGQYEQN 381 (381)
T ss_dssp EEEEEETTEEEEC
T ss_pred EEEEEECCEEeeC
Confidence 9999999999985
No 61
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.93 E-value=1.7e-26 Score=252.07 Aligned_cols=108 Identities=16% Similarity=0.109 Sum_probs=78.7
Q ss_pred hhhHHHHHHCCCeeeecCCCCCCCC--CHH----HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCc
Q 008063 463 SYLFQSLLANNALLALGSDWPVADI--NPL----CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 536 (579)
Q Consensus 463 ~~~l~~l~~~Gi~v~~gsD~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~ 536 (579)
......+++.|....+++|...... ... .....+...... .........+++++++|+++|+|||++||++++
T Consensus 341 ~~~~~~l~~~G~~~~i~sD~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~gls~~eal~~aTiNPAralGL~d~ 419 (566)
T 4ep8_C 341 IAAEDVLHDLGAFSLTSSDSQAMGRVGEVILRTWQVAHRMKVQRGA-LAEETGDNDNFRVKRYIAKYTINPALTHGIAHE 419 (566)
T ss_dssp HHHHHHHHHHTSSCEECCCTTSSSCTTCHHHHHHHHHHHHHHHHCS-CTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTTT
T ss_pred hHHHHHHHhCCCcceEeecccccccccccccccCCCCchHHHHHHH-HHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 3445667788999999999764431 111 111111111110 011223456799999999999999999999999
Q ss_pred cccccCCCcccEEEeCCCCCCChhhccCCeEEEEEECCEEeC
Q 008063 537 VGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 578 (579)
Q Consensus 537 ~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v~v~G~~v~ 578 (579)
+|+|++||+|||||||.++|. .++..|+++|++||
T Consensus 420 iGSIevGK~ADLVL~Dp~~f~-------vkP~~v~~~G~iv~ 454 (566)
T 4ep8_C 420 VGSIEVGKLADLVVWSPAFFG-------VKPATVIKGGMIAI 454 (566)
T ss_dssp SSSSCTTSBCCEEEECGGGTT-------TSCSEEEETTEEEE
T ss_pred CcCCCCCCCCCEEEECccccC-------CCeeEEeeCCEEEE
Confidence 999999999999999988764 37899999999997
No 62
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.93 E-value=4.1e-24 Score=222.70 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=106.4
Q ss_pred CCHHHHHHHHHHHHHCCC------eEEEEec-chHHHHHHHHHHHHHHHhcCCCCCCc-eEeeccCCCh----hhHHHHh
Q 008063 363 MELESLLSMTMASDKSGL------QVAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRF-RIEHAQHLAS----GTAARFG 430 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~------~i~iH~~-g~~~~~~~~~~~~~~~~~~~~~~~~~-~i~H~~~~~~----~~~~~~~ 430 (579)
.+.+++.++++.+++.+. .+.+|+. .....+.+.+..+ . +....++ ...|+. ..+ +.++.++
T Consensus 173 ~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~~~~~~----~-g~~~v~~l~~~h~~-~~~~~~~~~~~~~~ 246 (390)
T 1onw_A 173 PDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLE----N-CDVPISKLLPTHVN-RNVPLFEQALEFAR 246 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHHHHHHH----T-CCCCGGGEEEECGG-GSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHHHHHHh----c-cCCceEEeeccccc-cCHHHHHHHHHHHh
Confidence 577888888887765543 3677873 3333333333221 1 1111111 224542 222 3344455
Q ss_pred hCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCe---eeecCCCCCC-CC----------------CHH
Q 008063 431 DQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL---LALGSDWPVA-DI----------------NPL 490 (579)
Q Consensus 431 ~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~---v~~gsD~~~~-~~----------------~~~ 490 (579)
..+.....++.... . ....+++.+++.|++ ++++||+... +. ...
T Consensus 247 ~~~~~~~~~~~~~~--------------~-~~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~ 311 (390)
T 1onw_A 247 KGGTIDITSSIDEP--------------V-APAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLL 311 (390)
T ss_dssp TTCCEEEETTCCSS--------------S-CHHHHHHHHHHTTCCGGGEEEECCBTCC-------------CCCCSHHHH
T ss_pred cCCccccccccCCC--------------C-cCHHHHHHHHHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHH
Confidence 55543344432211 0 234478899999984 7999997422 10 122
Q ss_pred HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCeEEEE
Q 008063 491 CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEAT 570 (579)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~v~~v 570 (579)
..++.++. ..+++++++++++|.|||+.||++ .+|+|++|+.|||||+|.+ + .|..|
T Consensus 312 ~~~~~~~~------------~~~~~~~~~~~~~t~npA~~~gl~-~~G~i~~G~~ADlvv~d~~-~---------~v~~v 368 (390)
T 1onw_A 312 ETVQVLVK------------DYDFSISDALRPLTSSVAGFLNLT-GKGEILPGNDADLLVMTPE-L---------RIEQV 368 (390)
T ss_dssp HHHHHHHH------------HHCCCHHHHHGGGTHHHHHHTTCT-TCSSCCTTSBCCEEEECTT-C---------CEEEE
T ss_pred HHHHHHHH------------HcCCCHHHHHHHHhHHHHHHhCCC-CCcccCCCCcCCEEEEcCC-C---------cEEEE
Confidence 33333321 235999999999999999999996 4799999999999999976 2 58899
Q ss_pred EECCEEeC
Q 008063 571 YVSGVQAY 578 (579)
Q Consensus 571 ~v~G~~v~ 578 (579)
|++|++||
T Consensus 369 ~~~G~~v~ 376 (390)
T 1onw_A 369 YARGKLMV 376 (390)
T ss_dssp EETTEEEE
T ss_pred EECCEEEE
Confidence 99999886
No 63
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.87 E-value=2.4e-22 Score=207.87 Aligned_cols=69 Identities=19% Similarity=0.227 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEEEeCCCCCCChhhccCCe
Q 008063 487 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSAS 566 (579)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlvvld~~~~~~~~~~~~~~ 566 (579)
.+++.+++.++.. .+++++++++++|.|||++||++++ |+|++|+.|||||+|.+ .+
T Consensus 305 ~~l~~~l~~~~~~------------~~~~~~~~l~~~T~~~A~~lgl~~~-G~i~~G~~ADlv~~d~~----------~~ 361 (376)
T 1o12_A 305 LFFSQAVKNFRKF------------TGCSITELAKVSSYNSCVELGLDDR-GRIAEGTRADLVLLDED----------LN 361 (376)
T ss_dssp CCHHHHHHHHHHH------------HCCCHHHHHHHHTHHHHHHTTCTTS-SCCSTTSBCCEEEECTT----------CC
T ss_pred cCHHHHHHHHHHH------------cCCCHHHHHHHHHHHHHHHhCCCCC-ccCCCCCcCCEEEECCC----------CC
Confidence 5788888877642 2489999999999999999999875 99999999999999966 27
Q ss_pred EEEEEECCEEeC
Q 008063 567 IEATYVSGVQAY 578 (579)
Q Consensus 567 v~~v~v~G~~v~ 578 (579)
|..||++|++||
T Consensus 362 v~~v~~~G~~v~ 373 (376)
T 1o12_A 362 VVMTIKEGEVVF 373 (376)
T ss_dssp EEEEEETTEEEE
T ss_pred EEEEEECCEEEe
Confidence 999999999986
No 64
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=99.70 E-value=7.5e-16 Score=156.35 Aligned_cols=252 Identities=12% Similarity=0.096 Sum_probs=149.2
Q ss_pred HHHhcCccEEEeCCcCCCCCccccchHHHHHHHHHHhhcCC-CeeEEEEc--cCccchhhHHHHHHhcCCCCCCceEEce
Q 008063 255 LALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEK-MKIRVCLF--FPLETWSSLADLINKTGHVLSDWVYLGG 331 (579)
Q Consensus 255 ~~~~~Git~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g 331 (579)
.+.+.|+|++.++.+..|. ..+.+......+.++.... ..+..+.. ....+.++..+... . ..+
T Consensus 48 aA~aGG~Ttvi~mPnt~P~---~~~~~~~~~~~~~a~~~~~~vd~~~~~~l~lt~~~~~el~~l~~-------~---v~~ 114 (359)
T 3pnu_A 48 PLSARDFCAAVIMPNLIPP---LCNLEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLYSAKD-------E---IFG 114 (359)
T ss_dssp HHHHTTCSEEEECCCCSSC---CCSHHHHHHHHHHHHHHHTTSCCEEEEEEECSCCCHHHHHHHTT-------T---CSE
T ss_pred HHHhCCCcEEEECCCCCCC---CCcHHHHHHHHHHHhccCCCceEEEeeeeEecCCCHHHHHHHHH-------h---hhe
Confidence 5777899999998744332 2334333333444433222 22222222 33222223322211 1 235
Q ss_pred EEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHH----HHHHHHHHHHHHHhcC
Q 008063 332 VKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA----NDLVLDMYKSVVVTTG 407 (579)
Q Consensus 332 ~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~----~~~~~~~~~~~~~~~~ 407 (579)
+|++..|... +.+ .+....+.+.+.++++.+++.|.++.+|+....- ....++....+.+.+
T Consensus 115 ~Kl~~aga~~---------~s~----~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~~E~~ai~r~~~la~~~- 180 (359)
T 3pnu_A 115 IKLYPAGITT---------NSN----GGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHF- 180 (359)
T ss_dssp EEECBTTSSS---------SCT----TSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGGGTTGGGHHHHHHHHHHC-
T ss_pred hhheeCCCcc---------cCc----CCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhHHHHHHHHHHHHHHHHHc-
Confidence 6776554321 110 0122247899999999999999999999974320 011111111111212
Q ss_pred CCCCCceEeeccCCChhhHHHHhh-CCcEEEecccccccchhHHH--------HhhChhhhhhhhhhHHHHHHCCCee-e
Q 008063 408 KRDQRFRIEHAQHLASGTAARFGD-QGIVASMQPQHLLDDADSAR--------KKLGVDRAERESYLFQSLLANNALL-A 477 (579)
Q Consensus 408 ~~~~~~~i~H~~~~~~~~~~~~~~-~~i~~~~~p~~~~~~~~~~~--------~~l~~~~~~~~~~~l~~l~~~Gi~v-~ 477 (579)
.+.+.++.|... .+.++.+++ ..+++.+||++...+.+.+. +..+|.|.++....+.+.+..|.+. .
T Consensus 181 -~g~~lhi~HvSt--~~~v~~I~~A~~VtaEv~phhL~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~ 257 (359)
T 3pnu_A 181 -PRLKIVMEHITT--KTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVM 257 (359)
T ss_dssp -TTSCEEECSCCS--HHHHHHHHHCTTEEEEECSGGGTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEE
T ss_pred -CCCcEEEEecCc--HHHHHHHHhcCCceEEEechhhEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEE
Confidence 256888888763 555565555 58999999999987666553 2345666656677788888999888 7
Q ss_pred ecCCCCCCCCCHH----------------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCcccccc
Q 008063 478 LGSDWPVADINPL----------------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 541 (579)
Q Consensus 478 ~gsD~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~ 541 (579)
++||.+.-..+.. ..+...+ ..+++++++++.++.|||+++|++.+.
T Consensus 258 iaTDHaPh~~~eK~~~~g~~Gi~~~~~~L~l~~~~~-------------~~~~~l~~lv~~~s~nPAki~gL~~~~---- 320 (359)
T 3pnu_A 258 FGSDSAPHPKDTKECCGCAAGVFSAPVILPVLAELF-------------KQNSSEENLQKFLSDNTCKIYDLKFKE---- 320 (359)
T ss_dssp ECCCBCCCBC------CCCSCBCCGGGHHHHHHHHH-------------HHHSCHHHHHHHHTHHHHHHHTCCCSS----
T ss_pred EecCCCCCCHHHhCCCCCCCChhhHHHHHHHHHHHH-------------hhcCCHHHHHHHHHHhHHHHhCCCCCC----
Confidence 9999654322111 1112221 123689999999999999999997533
Q ss_pred CCCcccEEEeCCCCCC
Q 008063 542 PGKIADFVILSTSSWE 557 (579)
Q Consensus 542 ~G~~ADlvvld~~~~~ 557 (579)
| |||+|+| .+|.
T Consensus 321 -G--Adlvl~d-~~~~ 332 (359)
T 3pnu_A 321 -D--KILTLEE-KEWQ 332 (359)
T ss_dssp -C--CEEEEEC-CCEE
T ss_pred -C--CeEEEEe-cCEE
Confidence 4 9999999 7665
No 65
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.57 E-value=5.7e-15 Score=116.40 Aligned_cols=73 Identities=34% Similarity=0.484 Sum_probs=60.9
Q ss_pred CccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeecccccccccccccCc
Q 008063 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (579)
Q Consensus 44 ~~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~~~~~ 117 (579)
.++++|+|++|+++++.....++|+|+||||++|++..+... .+++.++||++|++|+|||||+|+|+..+.+
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~ 75 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNS-ATEKTKKIDLKRKRAIPGLNDSHIHVIRGLE 75 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGG-CCTTCEEEECTTCEEEECCCCTTEEEECCCC
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcc-cCCCCEEEECCCCEEeeCeEeeeeCCCCccc
Confidence 467999999999987765567899999999999998755322 1356789999999999999999999988765
No 66
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.51 E-value=2.8e-13 Score=137.94 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=103.8
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchH--------HHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhh--C
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDR--------ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD--Q 432 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~--~ 432 (579)
.+.+.+.++++.+++.|.++.+|+.... +...+.+.+...... ..+.+.++.|... .+.++.+++ .
T Consensus 117 ~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la~--~~~~~~hi~Hvst--~~~~~~i~~ak~ 192 (347)
T 2z26_A 117 TSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQR--LTALKVVFEHITT--KDAADYVRDGNE 192 (347)
T ss_dssp SCGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHHH--STTCCEEECSCCS--HHHHHHHHTSCT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHHh--hcCCcEEEEECCc--HHHHHHHHHhCC
Confidence 3567899999999999999999996322 111111111111222 2466888888753 555555554 4
Q ss_pred CcEEEecccccccchhHHH--------HhhChhhhhhhhhhHHHHHHCCCee-eecCCCCCCCC---------------C
Q 008063 433 GIVASMQPQHLLDDADSAR--------KKLGVDRAERESYLFQSLLANNALL-ALGSDWPVADI---------------N 488 (579)
Q Consensus 433 ~i~~~~~p~~~~~~~~~~~--------~~l~~~~~~~~~~~l~~l~~~Gi~v-~~gsD~~~~~~---------------~ 488 (579)
++++.+||++...+.+.+. +..++.|.++....+...+..|.+. .++||...... .
T Consensus 193 ~Vt~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~~~g~~Gi~~~e 272 (347)
T 2z26_A 193 RLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAP 272 (347)
T ss_dssp TEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSSSSBCCCCCCTT
T ss_pred CceEeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcCCCCCCCcCcHH
Confidence 6899999999876655443 2345555445666788888899877 89999732210 0
Q ss_pred -HHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCccccc
Q 008063 489 -PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 540 (579)
Q Consensus 489 -~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I 540 (579)
.+..+...+ ..+++++++++++|.|||+++|+..++|+|
T Consensus 273 ~~l~l~~~~~-------------~~~~sl~~~v~~~s~nPAki~gl~~~kG~i 312 (347)
T 2z26_A 273 TALGSYATVF-------------EEMNALQHFEAFCSVNGPQFYGLPVNDTFI 312 (347)
T ss_dssp THHHHHHHHH-------------HHTTCGGGHHHHHHTHHHHHHTCCCCCCEE
T ss_pred HHHHHHHHHh-------------hcCCCHHHHHHHHhHhHHHHhCCCCCCCeE
Confidence 111111111 124799999999999999999997557875
No 67
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=99.10 E-value=6.5e-10 Score=113.71 Aligned_cols=236 Identities=14% Similarity=0.066 Sum_probs=147.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCccEEEeC---Cc--CCCCCccccchHHHHHHHHHHhhcC--CCeeEEEEccC----ccc
Q 008063 240 VSVDERREALLRASNLALSRGVTTVVDF---GR--YYPGESVQLSWEDFADVYQWASYSE--KMKIRVCLFFP----LET 308 (579)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~Git~v~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~~~~~----~~~ 308 (579)
.++++++......++.+.+.|+|.+.-. .. ...+.+.....+...+..+.+.+.- .+.+++..... .+.
T Consensus 108 ~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r~~~~~~ 187 (371)
T 2pgf_A 108 HDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHEAAN 187 (371)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEESSTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCHHH
Confidence 4789999999999999999999987321 00 0112222122222333444443333 44444443321 122
Q ss_pred hhhHHHHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecc
Q 008063 309 WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIG 388 (579)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g 388 (579)
..+..+.... ..+. ..|+.+..+ +. . ++.+.++++.|++.|+++.+|+.+
T Consensus 188 ~~~~~~~a~~----~~~~--vvg~dl~g~-------------e~----------~-~~~~~~~~~~A~~~gl~~~~HagE 237 (371)
T 2pgf_A 188 IKASADFCLK----HKAD--FVGFDHGGH-------------EV----------D-LKEYKEIFDYVRESGVPLSVHAGE 237 (371)
T ss_dssp HHHHHHHHHH----TTTT--EEEEEEEES-------------CC----------C-GGGGHHHHHHHHHTTCCBEEEESC
T ss_pred HHHHHHHHHh----CCCC--EEEEecCCC-------------cc----------c-HHHHHHHHHHHHHcCCcEEEeeCC
Confidence 2233333222 1111 223322211 11 1 456889999999999999999975
Q ss_pred h--HHH-HHHHHHHHHHHHhcCCCCCCceEeeccCCChhh--HHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhh
Q 008063 389 D--RAN-DLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT--AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERES 463 (579)
Q Consensus 389 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~--~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 463 (579)
. ... ..+.+++. ..+ ...+.|+..+.+++ ++++++.++.+++||.+|.. ++.... -..
T Consensus 238 ~~~~~~~~~i~~al~----~lg----~~ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~--------l~~~~~-~~~ 300 (371)
T 2pgf_A 238 DVTLPNLNTLYSAIQ----VLK----VERIGHGIRVAESQELIDMVKEKNILLEVCPISNVL--------LKNAKS-MDT 300 (371)
T ss_dssp CTTSSSSHHHHHHHH----TSC----CSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHH--------TTSSSC-GGG
T ss_pred CCCCCchHHHHHHHh----ccC----CCEEecchhccccHHHHHHHHHcCCeEEECcchhHH--------hCCCCc-ccc
Confidence 4 221 22222222 112 34899999997766 99999999999999999852 221000 134
Q ss_pred hhHHHHHHCCCeeeecCCCCCC-CCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 464 YLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 464 ~~l~~l~~~Gi~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
.|++.++++|++|++|||.+.. ..+++.+++.+.... +++++++ ..+|.|++++.++++
T Consensus 301 ~pi~~ll~~Gv~V~lgTD~~~~~~~~l~~e~~~a~~~~------------~l~~~~l-~~lt~ns~~asf~~~ 360 (371)
T 2pgf_A 301 HPIRQLYDAGVKVSVNSDDPGMFLTNINDDYEELYTHL------------NFTLEDF-MKMNEWALEKSFMDS 360 (371)
T ss_dssp CTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHHHHHH------------CCCHHHH-HHHHHHHHHHCCSCH
T ss_pred ChHHHHHHCCCeEEEeCCCCcccCCCHHHHHHHHHHHh------------CCCHHHH-HHHHHHHHHHHcCCH
Confidence 5899999999999999997643 358888888776532 5899995 888999999998864
No 68
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=98.94 E-value=1.1e-08 Score=102.91 Aligned_cols=240 Identities=11% Similarity=0.048 Sum_probs=146.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCccEEEeCCc----CCCCCccccchHHHHHHHHHHhhcCCCeeEEEEccC-ccchhhHHHH
Q 008063 241 SVDERREALLRASNLALSRGVTTVVDFGR----YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFP-LETWSSLADL 315 (579)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~Git~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~-~~~~~~~~~~ 315 (579)
++++++......++.+.+.|++.+--... ...|.+....++...+..+..++.-.+.+++..... ..+.+...+.
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~ 154 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDSALEV 154 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCCCHHHHHHH
Confidence 67899999999999999999987643210 001221111122222222222222234444443221 1111222222
Q ss_pred HHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHH
Q 008063 316 INKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLV 395 (579)
Q Consensus 316 ~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~ 395 (579)
....... .+. ..|+.+..+. . ..+++.+.++++.|++.|+++++|+.+......+
T Consensus 155 l~~a~~~-~~~--vvG~dL~g~E------------~----------~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i 209 (343)
T 3rys_A 155 LDQLLAM-HAP--IAGIGLDSAE------------V----------GNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYI 209 (343)
T ss_dssp HHHHHHT-TCC--CCEEEEESCC------------T----------TCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHH
T ss_pred HHHHHhC-CCC--EEEEecCCcc------------c----------CCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHH
Confidence 2221111 121 2344332110 0 0345678899999999999999999754333333
Q ss_pred HHHHHHHHHhcCCCCCCceEeeccCCC--hhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCC
Q 008063 396 LDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN 473 (579)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~G 473 (579)
.+++. ..+ ...+.|+..+. ++.++++++.++.+.+||.+|.. ++.... -...|++.|+++|
T Consensus 210 ~~al~----~lg----~~rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~--------l~~~~~-~~~hPi~~ll~~G 272 (343)
T 3rys_A 210 TEALD----VLH----VERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVR--------LRAVDK-LADHPLPEMLAIG 272 (343)
T ss_dssp HHHHH----TSC----CSEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHH--------TTSSSC-GGGCSHHHHHHTT
T ss_pred HHHHh----cCC----cceeeeeeeecCChHHHHHHHhcCCCeeEchhHHHH--------hCCCCC-cccchHHHHHHCC
Confidence 33322 122 45799999886 47999999999999999999862 221000 1345899999999
Q ss_pred CeeeecCCCCCCC-CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 474 ALLALGSDWPVAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 474 i~v~~gsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
++++++||.+... .++..+++.+.... ++++++ +..++.|++++..+++
T Consensus 273 v~V~l~TDdp~~~~~~l~~E~~~a~~~~------------~l~~~~-l~~l~~nsi~~sf~~~ 322 (343)
T 3rys_A 273 LNVCVNSDDPAYFGGYVDDNFEQLVKVL------------EFSVPE-QATLAANSIRSSFASD 322 (343)
T ss_dssp CCEEECCBSTTTTTCCHHHHHHHHHHHH------------CCCHHH-HHHHHHHHHHHSSSCH
T ss_pred CeEEEeCCCccccCCCHHHHHHHHHHHc------------CCCHHH-HHHHHHHHHHHHCCCH
Confidence 9999999987543 57888888776532 489999 4666799999988764
No 69
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=98.92 E-value=1.7e-08 Score=102.15 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC--hhhHHHHhhCCcEEEeccccc
Q 008063 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHL 443 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~~~~~~~~~i~~~~~p~~~ 443 (579)
+.+.++++.|++.|+++++|+.+......+.+++. ..+ ...+.|+..+. ++.++++++.++.+.+||.+|
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~----~lg----~~RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN 263 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVD----ILK----TERLGHGYHTLEDQALYNRLRQENMHFEICPWSS 263 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHH----TSC----CSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHH----ccC----CceeeeeeeecCCHHHHHHHHhCCcEEEECHHHH
Confidence 67889999999999999999974433333333322 122 44899999885 579999999999999999998
Q ss_pred ccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCC-CCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHH
Q 008063 444 LDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIA 522 (579)
Q Consensus 444 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 522 (579)
. .++.... -...|++.|+++|++++++||.+.. ..++..++..+... .++++++ +..
T Consensus 264 ~--------~l~~~~~-~~~hPi~~ll~~Gv~v~l~TDdp~~~~~~l~~e~~~a~~~------------~glt~~e-l~~ 321 (367)
T 3iar_A 264 Y--------LTGAWKP-DTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTKRD------------MGFTEEE-FKR 321 (367)
T ss_dssp H--------HTSSSCT-TSCCHHHHHHHTTCCEEECCBSHHHHTCCHHHHHHHHHHH------------HCCCHHH-HHH
T ss_pred H--------HhCCCCC-cccChHHHHHHCCCEEEECCCCccccCCCHHHHHHHHHHH------------cCCCHHH-HHH
Confidence 6 2221111 2356899999999999999997633 34677777666532 2589999 666
Q ss_pred HcHHHHHhcccCC
Q 008063 523 HTLSAARACFLEN 535 (579)
Q Consensus 523 ~T~npA~~lgl~~ 535 (579)
+|.|++++..+++
T Consensus 322 l~~nsi~~sf~~~ 334 (367)
T 3iar_A 322 LNINAAKSSFLPE 334 (367)
T ss_dssp HHHHHHHTSSSCH
T ss_pred HHHHHHHHhCCCH
Confidence 6799999887753
No 70
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=98.90 E-value=2.7e-09 Score=106.52 Aligned_cols=239 Identities=10% Similarity=0.011 Sum_probs=144.0
Q ss_pred CHHHHHHHHHHHHHHHHhcCccEEEeCC---c-CCCCCccccchHHHHHHHHHHhhcCCCeeEEEEcc-CccchhhHHHH
Q 008063 241 SVDERREALLRASNLALSRGVTTVVDFG---R-YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF-PLETWSSLADL 315 (579)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~Git~v~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~-~~~~~~~~~~~ 315 (579)
++++++......++++.+.|++.+--.. . ...+.+....++...+..+..++.-.+.+++.... ...+.+...+.
T Consensus 72 t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~ 151 (326)
T 3pao_A 72 TEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKT 151 (326)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEETTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeCCCCCHHHHHHH
Confidence 5789999999999999999998753211 0 00122222222223333443333333333333321 11112222232
Q ss_pred HHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchHHHHHH
Q 008063 316 INKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLV 395 (579)
Q Consensus 316 ~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~ 395 (579)
.+..... .+ ...|+.+..+. . ..+++.+.++++.|++.|+++++|+.+......+
T Consensus 152 ~~~a~~~-~~--~vvG~dL~g~E-------------~---------~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i 206 (326)
T 3pao_A 152 LDQALPF-RD--AFIAVGLDSSE-------------V---------GHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYI 206 (326)
T ss_dssp HHHHGGG-GG--GCSEEEEESCC-------------T---------TCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHH
T ss_pred HHHHhhc-cc--cceeeCCCCCC-------------C---------CCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHH
Confidence 2222111 11 12343332110 0 0345678899999999999999999754333333
Q ss_pred HHHHHHHHHhcCCCCCCceEeeccCCC--hhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCC
Q 008063 396 LDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN 473 (579)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~G 473 (579)
.++++. .+ ...+.|+..+. +++++++++.++.+.+||.+|.. ++.... -...|++.|+++|
T Consensus 207 ~~al~~----lg----~~rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~--------l~~~~~-~~~hPi~~ll~~G 269 (326)
T 3pao_A 207 WEALDL----LK----VERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTK--------LCVFDD-MSQHTILDMLERG 269 (326)
T ss_dssp HHHHHT----TC----CSSEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHH--------TTSSSS-GGGCCHHHHHHHT
T ss_pred HHHHhc----CC----CceeeeeeeecccHHHHHHHHHcCCeEEECchhHHH--------hCCCCC-cccChHHHHHHCC
Confidence 333221 22 34699999887 56999999999999999999862 221100 1355899999999
Q ss_pred CeeeecCCCCCC-CCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 474 ALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 474 i~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
++++++||.+.. ..++..+++.+... .++++++ +..++.|++++..+.
T Consensus 270 v~V~l~TDdp~~~~~~l~~e~~~a~~~------------~~l~~~~-l~~l~~nsi~~sf~~ 318 (326)
T 3pao_A 270 VKVTVNSDDPAYFGGYVTENFHALQQS------------LGMTEEQ-ARRLAQNSLDARLVK 318 (326)
T ss_dssp CCEEECCBSHHHHTCCHHHHHHHHHHH------------HCCCHHH-HHHHHHHHHHTCC--
T ss_pred CeEEEeCCCcccCCCCHHHHHHHHHHH------------cCCCHHH-HHHHHHHHHHHHHhc
Confidence 999999997643 34888888877653 2589999 577779999987664
No 71
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.60 E-value=1.7e-06 Score=86.94 Aligned_cols=151 Identities=12% Similarity=0.113 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEec--chHHHHHHHHHHHHHHHhcCCCCCCceEeecc-CCChhhHHHHhhCCcEEEecc--
Q 008063 366 ESLLSMTMASDKSGLQVAIHAI--GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQP-- 440 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~~~~~~~~~i~~~~~p-- 440 (579)
+.+++.+++|++.|+|+.+|+. +..+. ..++.+++ .+....+..+.||. ..+.+...++.+.|..++..-
T Consensus 148 ~~f~~q~~lA~~~glPv~iH~~~~~r~a~-e~l~iL~~----~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G 222 (330)
T 2ob3_A 148 LVLKAAARASLATGVPVTTHTAASQRDGE-QQAAIFES----EGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIP 222 (330)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCGGGTHHH-HHHHHHHH----TTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHHhCCeEEEECCCCCCCHH-HHHHHHHH----cCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeCCCc
Confidence 4478889999999999999994 33333 44444433 23222234689998 578899999999999888762
Q ss_pred cccccch--h-HHHH-hhChhhhhhhhhhHHHHHHCC--CeeeecCCCCC-CCCC----HHH-----------HHHHHHc
Q 008063 441 QHLLDDA--D-SARK-KLGVDRAERESYLFQSLLANN--ALLALGSDWPV-ADIN----PLC-----------AIRTAMK 498 (579)
Q Consensus 441 ~~~~~~~--~-~~~~-~l~~~~~~~~~~~l~~l~~~G--i~v~~gsD~~~-~~~~----~~~-----------~~~~~~~ 498 (579)
....... + ...+ ...+. . +....++.+.+.+ -++.+.||.+. ..+. ... .+...+.
T Consensus 223 ~~tf~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~~~n~pn~~~~~~~~~ia 300 (330)
T 2ob3_A 223 YSAIGLEDNASASALLGIRSW-Q-TRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIP 300 (330)
T ss_dssp CCCTTCTTCHHHHHHHCSSCH-H-HHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHHHHCTTGGGHHHHTHHH
T ss_pred cccccccccccccccccCCCH-H-HHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCcccccCCCCcchHHHHHHH
Confidence 1111000 0 0000 00000 0 2223477888888 57899999875 2221 000 0111111
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcc
Q 008063 499 RIPPGWDNAWIPSERISLTDALIAHTLSAARACF 532 (579)
Q Consensus 499 ~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lg 532 (579)
.. .+.|++++++.++.|.||+++|+
T Consensus 301 ~l---------~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 301 FL---------REKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp HH---------HHTTCCHHHHHHHHTHHHHHHHS
T ss_pred HH---------HHcCCCHHHHHHHHHHHHHHHhc
Confidence 11 12569999999999999999997
No 72
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.52 E-value=3.1e-06 Score=81.98 Aligned_cols=135 Identities=16% Similarity=0.051 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
.+.+.+.++.|.+.|+|+.+|+... ...+++.+++. +. . ...+.|+...+.+.++++.+.|+.+++.+....
T Consensus 113 ~~~f~~~~~~a~~~~~Pv~iH~~~a--~~~~~~il~~~----~~-~-~~~i~H~~~g~~~~~~~~~~~g~~i~~~g~~~~ 184 (259)
T 1zzm_A 113 QWLLDEQLKLAKRYDLPVILHSRRT--HDKLAMHLKRH----DL-P-RTGVVHGFSGSLQQAERFVQLGYKIGVGGTITY 184 (259)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESC--HHHHHHHHHHH----CC-T-TCEEETTCCSCHHHHHHHHHTTCEEEECGGGGC
T ss_pred HHHHHHHHHHHHHhCCcEEEEeccc--HHHHHHHHHhc----CC-C-CCEEEEcCCCCHHHHHHHHHCCCEEEECceeec
Confidence 3568889999999999999999642 23444444332 22 1 234569988788888888889999988754321
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHC-C-CeeeecCCCCCCCCCH----------HHHHHHHHcccCCCCCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLAN-N-ALLALGSDWPVADINP----------LCAIRTAMKRIPPGWDNAWIPSE 512 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~-G-i~v~~gsD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 512 (579)
+....++.+.+. + -++.++||.|...+.+ .......+. ...
T Consensus 185 ----------------~~~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la-----------~~~ 237 (259)
T 1zzm_A 185 ----------------PRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLC-----------ELR 237 (259)
T ss_dssp ----------------TTTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHH-----------HHC
T ss_pred ----------------cccHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHH-----------HHH
Confidence 001123344443 2 3689999998653221 111111111 123
Q ss_pred CCCHHHHHHHHcHHHHHhcccC
Q 008063 513 RISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 513 ~ls~~~al~~~T~npA~~lgl~ 534 (579)
+++.+++.+..|.|++++++++
T Consensus 238 g~~~e~~~~~~~~Na~rl~~l~ 259 (259)
T 1zzm_A 238 REPADEIAQALLNNTYTLFNVP 259 (259)
T ss_dssp SSCHHHHHHHHHHHHHHHHCCC
T ss_pred CcCHHHHHHHHHHHHHHHhCcC
Confidence 5999999999999999999863
No 73
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.42 E-value=3.7e-06 Score=81.66 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
.+.+.+.++.|.+.|+++.+|+... ....++.+++ .+....+. +.|+...+.+.++.+.+.|+.+.++.....
T Consensus 110 ~~~~~~~~~~a~~~~~pv~iH~~~~--~~~~~~~l~~----~~~p~~~~-v~H~~~~~~~~~~~~~~~g~~~~~sg~~~~ 182 (265)
T 1yix_A 110 QESFIHHIQIGRELNKPVIVHTRDA--RADTLAILRE----EKVTDCGG-VLHCFTEDRETAGKLLDLGFYISFSGIVTF 182 (265)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHH----TTGGGTCE-EETTCCSCHHHHHHHHTTTCEEEECGGGGS
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCc--hHHHHHHHHh----cCCCCCCE-EEEcCCCCHHHHHHHHHCCcEEEECCcccc
Confidence 4568889999999999999999633 2334443333 22122233 459988888888999888999988864322
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHC-C-CeeeecCCCCCCCCCH----------HHHHHHHHcccCCCCCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLAN-N-ALLALGSDWPVADINP----------LCAIRTAMKRIPPGWDNAWIPSE 512 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~-G-i~v~~gsD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 512 (579)
. ....++.+.+. + -++.+|||+|...+.+ +......+.. ..
T Consensus 183 ~----------------~~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~~-----------~~ 235 (265)
T 1yix_A 183 R----------------NAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV-----------LK 235 (265)
T ss_dssp T----------------TCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHH-----------HH
T ss_pred C----------------chHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHH-----------Hh
Confidence 1 01123444443 4 3789999998653211 1111112211 12
Q ss_pred CCCHHHHHHHHcHHHHHhcccCC
Q 008063 513 RISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 513 ~ls~~~al~~~T~npA~~lgl~~ 535 (579)
+++.+++.++.+.|+++++|++.
T Consensus 236 ~~~~~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 236 GVAVEELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCCG
T ss_pred CcCHHHHHHHHHHHHHHHhCcCh
Confidence 48999999999999999999853
No 74
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.42 E-value=3.5e-06 Score=81.87 Aligned_cols=135 Identities=10% Similarity=0.008 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEeccccc-c
Q 008063 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHL-L 444 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~-~ 444 (579)
+.+.+.++.|.+.|+++.+|+... ....++.+++ .+....+. +.|+...+.+.++.+.+.|+.+++..... .
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a--~~~~~~il~~----~~~~~~~~-v~H~~~g~~~~~~~~~~~g~yi~~~g~~~~~ 184 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDA--HERFMTLLEP----WLDKLPGA-VLHCFTGTREEMQACVAHGIYIGITGWVCDE 184 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHGG----GGGGSSCE-EECSCCCCHHHHHHHHHTTCEEEECGGGGCT
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCc--hHHHHHHHHh----cCCCCCcE-EEEccCCCHHHHHHHHHCCeEEEECccccCC
Confidence 458889999999999999999632 2333333332 22212233 55988778888888888999988875322 1
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCCC--------------HHHHHHHHHcccCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADIN--------------PLCAIRTAMKRIPPGWDNAW 508 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 508 (579)
+....++.+.+. +. ++.++||+|...+. .+......+.
T Consensus 185 ----------------~~~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a---------- 238 (264)
T 1xwy_A 185 ----------------RRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIA---------- 238 (264)
T ss_dssp ----------------TTSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHH----------
T ss_pred ----------------cCcHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHH----------
Confidence 001123444443 22 69999999864322 1111111111
Q ss_pred CCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 509 IPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 509 ~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
...+++.+++.+..+.|+++++|++
T Consensus 239 -~~~g~~~e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 239 -HWRGEDAAWLAATTDANVKTLFGIA 263 (264)
T ss_dssp -HHHTCCHHHHHHHHHHHHHHHHCCC
T ss_pred -HHHCcCHHHHHHHHHHHHHHHhCcc
Confidence 1125899999999999999999874
No 75
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.41 E-value=1.3e-05 Score=79.98 Aligned_cols=143 Identities=8% Similarity=0.046 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHCCCeEEEEec--chHHHHHHHHHHHHHHHhcCCCCCCceEeeccC-CChhhHHHHhhCCcEEEecccc
Q 008063 366 ESLLSMTMASDKSGLQVAIHAI--GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFGDQGIVASMQPQH 442 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~-~~~~~~~~~~~~~i~~~~~p~~ 442 (579)
+.+++.++.|++.|+++.+|+. +... ...++.+++ .+....+..+.|+.. .+.+.+.++.+.|..+.++-..
T Consensus 151 ~~~~~~~~lA~~~~~pv~iH~~~~~~~~-~~~~~~l~~----~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~ 225 (314)
T 2vc7_A 151 KVIRAAAIANKETKVPIITHSNAHNNTG-LEQQRILTE----EGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYG 225 (314)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTTTHH-HHHHHHHHH----TTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCcccCh-HHHHHHHHH----cCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 4577889999999999999995 2332 344444332 343334567899986 5688899999999988877321
Q ss_pred cccchhHHHHhhChhhhhhhhhhHHHHHHCC--CeeeecCCCCCCC------CCHHH----------HHHHHHcccCCCC
Q 008063 443 LLDDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVAD------INPLC----------AIRTAMKRIPPGW 504 (579)
Q Consensus 443 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~G--i~v~~gsD~~~~~------~~~~~----------~~~~~~~~~~~~~ 504 (579)
.... ... . +....+..+.+.| -++.++||++..+ +.+.. .+...+...
T Consensus 226 ~~~~-------~~~--~-~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~l---- 291 (314)
T 2vc7_A 226 LDLF-------LPV--D-KRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTIPFL---- 291 (314)
T ss_dssp CTTT-------SCH--H-HHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHHHHH----
T ss_pred cccC-------CCH--H-HHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHHHHH----
Confidence 1100 000 0 2223456677763 4789999986432 01100 010111000
Q ss_pred CCCCCCCCCCCHHHHHHHHcHHHHHhcc
Q 008063 505 DNAWIPSERISLTDALIAHTLSAARACF 532 (579)
Q Consensus 505 ~~~~~~~~~ls~~~al~~~T~npA~~lg 532 (579)
...|++.+++.++.|.||+++++
T Consensus 292 -----~~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 292 -----KRNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp -----HHTTCCHHHHHHHHTHHHHHHTC
T ss_pred -----HHcCCCHHHHHHHHHHCHHHHhC
Confidence 12468999999999999999875
No 76
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.37 E-value=1.3e-05 Score=78.92 Aligned_cols=141 Identities=11% Similarity=0.080 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccC-CChhhHHHHhhCCcEEEecccccc
Q 008063 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~-~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
+.+++.++.|++.|+++.+|+.........++.+ ...+....+..+.|+.+ .+.+.+.++.+.|..+........
T Consensus 138 ~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~~~l----~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~ 213 (291)
T 1bf6_A 138 KVFIAAALAHNQTGRPISTHTSFSTMGLEQLALL----QAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKN 213 (291)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGCSHHHHHHHH----HHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTCT
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCCChHHHHHHH----HHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccCccc
Confidence 4688899999999999999994211111333333 22343344668999965 677888899999988877633100
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHCC--CeeeecCCCCCCCC---------CH-HHHHHHHHcccCCCCCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVADI---------NP-LCAIRTAMKRIPPGWDNAWIPSE 512 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~G--i~v~~gsD~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~ 512 (579)
. ..+ .. .....++.+.+.+ -++.++||++..++ .. +......+ ...
T Consensus 214 ~--------~~~-~~-~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~l------------~~~ 271 (291)
T 1bf6_A 214 S--------YYP-DE-KRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQL------------RQS 271 (291)
T ss_dssp T--------TSC-HH-HHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHHHHH------------HHT
T ss_pred C--------CCC-HH-HHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHHHHH------------HHc
Confidence 0 000 00 1223467788887 37899999875321 11 11111111 123
Q ss_pred CCCHHHHHHHHcHHHHHhcc
Q 008063 513 RISLTDALIAHTLSAARACF 532 (579)
Q Consensus 513 ~ls~~~al~~~T~npA~~lg 532 (579)
|++.+++.++.|.||++++|
T Consensus 272 g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 272 GFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp TCCHHHHHHHHTHHHHHHCC
T ss_pred CCCHHHHHHHHHHhHHHHhC
Confidence 58999999999999999885
No 77
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.27 E-value=1e-05 Score=79.20 Aligned_cols=138 Identities=15% Similarity=0.052 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
.+.+.+.+++|++.++|+.+|+... ....++.+++... . ..-.+.|+...+.++++++.+.|..+++......
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a--~~~~l~il~~~~~----~-~~~~V~H~fsG~~e~a~~~l~~G~yis~~g~i~~ 185 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDA--SERLLAILKDYRD----H-LTGAVVHCFTGEREALFAYLDLDLHIGITGWICD 185 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHTTGG----G-CSCEEECSCCCCHHHHHHHHHTTCEEEECGGGGC
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCc--HHHHHHHHHHcCC----C-CCeEEEEeCCCCHHHHHHHHHCCcEEEECchhcc
Confidence 4568899999999999999999743 2444444443211 1 1225679988899999999999999988743221
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCCCHH--------------HHHHHHHcccCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADINPL--------------CAIRTAMKRIPPGWDNAW 508 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 508 (579)
. +....++.+.+. +. ++.+.||.|...+.++ ......+.
T Consensus 186 ~---------------k~~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~lA---------- 240 (287)
T 3rcm_A 186 E---------------RRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVA---------- 240 (287)
T ss_dssp T---------------TTCGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHHHH----------
T ss_pred c---------------cCHHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHHHH----------
Confidence 0 001123444443 32 6899999886543221 11111111
Q ss_pred CCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 509 IPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 509 ~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
...|++++++.+..|.|+.+++|++.
T Consensus 241 -~~~g~s~eev~~~~~~N~~rlf~l~~ 266 (287)
T 3rcm_A 241 -LHRGESAEHTAAHTTATARDFFQLPA 266 (287)
T ss_dssp -HHHTSCHHHHHHHHHHHHHHHTTCCC
T ss_pred -HHhCcCHHHHHHHHHHHHHHHHCCCh
Confidence 12358999999999999999999865
No 78
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.27 E-value=3.6e-05 Score=74.99 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
.+.+++.+++|.+.|+|+.+|+... ....++.+++ .+ ..+ .+.|+...+.+.++++.+.|+.+++.+....
T Consensus 125 ~~~f~~~~~la~~~~lPv~iH~~~a--~~~~~~il~~----~~--~~~-~v~H~~~g~~~~~~~~~~~g~~i~~~g~~~~ 195 (272)
T 2y1h_A 125 RQVLIRQIQLAKRLNLPVNVHSRSA--GRPTINLLQE----QG--AEK-VLLHAFDGRPSVAMEGVRAGYFFSIPPSIIR 195 (272)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTC--HHHHHHHHHH----TT--CCS-EEEETCCSCHHHHHHHHHTTCEEEECGGGGT
T ss_pred HHHHHHHHHHHHHhCCcEEEEeCCc--HHHHHHHHHh----CC--CCC-EEEEccCCCHHHHHHHHHCCCEEEECCcccC
Confidence 3467899999999999999999632 2333443332 33 123 4559988788889999999999988865421
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHCC--CeeeecCCCCCCCCC--------HHHHHHHHHcccCCCCCCCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVADIN--------PLCAIRTAMKRIPPGWDNAWIPSERI 514 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~G--i~v~~gsD~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l 514 (579)
+ + .++.+.+.. -++.++||.|...+. .+......+.. ..|+
T Consensus 196 ----------~-----~---~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la~-----------~~g~ 246 (272)
T 2y1h_A 196 ----------S-----G---QKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQ-----------VKGI 246 (272)
T ss_dssp ----------C-----H---HHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHHH-----------HHTS
T ss_pred ----------c-----H---HHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHHH-----------HHCc
Confidence 1 0 133444432 268999999854321 11122222211 1258
Q ss_pred CHHHHHHHHcHHHHHhcccCC
Q 008063 515 SLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 515 s~~~al~~~T~npA~~lgl~~ 535 (579)
+.+++.+..+.|+++++++++
T Consensus 247 ~~e~~~~~~~~N~~~l~~~~~ 267 (272)
T 2y1h_A 247 SVEEVIEVTTQNALKLFPKLR 267 (272)
T ss_dssp CHHHHHHHHHHHHHHHSTTHH
T ss_pred CHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999864
No 79
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.13 E-value=0.00013 Score=70.51 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhh-CCcEEEecccc
Q 008063 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD-QGIVASMQPQH 442 (579)
Q Consensus 364 ~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~-~~i~~~~~p~~ 442 (579)
..+.+...++.+.+.|+++.+|+.... ..+++.++ .++....+. +.|+...+.+.+..+.+ .|+.+.+....
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~l~----~~p~~~~~~-i~H~~~g~~~~~~~~l~~~~~y~~~sg~~ 179 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREAT--QDCIDILL----EEHAEEVGG-IMHSFSGSPEIADIVTNKLNFYISLGGPV 179 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHHHH----HTTGGGTCE-EETTCCSCHHHHHHHHHTSCCEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecccH--HHHHHHHH----hcCCCCCcE-EEEcCCCCHHHHHHHHHHCCceEEeccee
Confidence 346689999999999999999996432 33333333 333212344 56777666666666666 78888877443
Q ss_pred cccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCCCC----------HHHHHHHHHcccCCCCCCCCCC
Q 008063 443 LLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVADIN----------PLCAIRTAMKRIPPGWDNAWIP 510 (579)
Q Consensus 443 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 510 (579)
.... ...++.+.+ .|. ++.+|||+|...+. ........+..
T Consensus 180 ~~~~----------------~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~~l~~----------- 232 (265)
T 2gzx_A 180 TFKN----------------AKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAE----------- 232 (265)
T ss_dssp GCSS----------------CCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHHHHH-----------
T ss_pred ecCC----------------cHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHHHHHH-----------
Confidence 2210 012344444 343 79999999865432 11122222211
Q ss_pred CCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 511 SERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 511 ~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
..+++.++.-+..+.|+++++++..
T Consensus 233 ~~~~~~~~~~~i~~~Na~rl~~~~~ 257 (265)
T 2gzx_A 233 LKGLSYEEVCEQTTKNAEKLFNLNS 257 (265)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHC---
T ss_pred HhCCCHHHHHHHHHHHHHHHhCCch
Confidence 1358999999999999999999864
No 80
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=98.12 E-value=3e-05 Score=78.76 Aligned_cols=244 Identities=14% Similarity=0.063 Sum_probs=140.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCccEEEeCCc---C--CCCCccccchHHHHHHHHHHhhcCCCeeEEEEccC-ccchhhHH
Q 008063 240 VSVDERREALLRASNLALSRGVTTVVDFGR---Y--YPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFP-LETWSSLA 313 (579)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~Git~v~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~-~~~~~~~~ 313 (579)
-++++++......++.+.+.||.-+--... . ..|.+....++...+.++.....-.+.+++..... ..+.+...
T Consensus 89 ~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~~~e~a~ 168 (380)
T 4gxw_A 89 TRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAV 168 (380)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCHHHHH
Confidence 367888888899999999999987653210 0 01222222222333333444433345555544221 12222333
Q ss_pred HHHHhcCCCCCCceEEceEEEEEcCccCCCcccccCCCCCCCCCCcccCCCHHHHHHHHHHHHHCCCeEEEEecchH-HH
Q 008063 314 DLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-AN 392 (579)
Q Consensus 314 ~~~~~~~~~~~~~~~~~g~k~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~i~iH~~g~~-~~ 392 (579)
+..........+. ..|+.+. |. ..+ .++......++.|++.|+++++|+-+.. ..
T Consensus 169 ~~~~~a~~~~~~~--VvG~dL~--g~-----------E~~---------~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~ 224 (380)
T 4gxw_A 169 AIVDWMKANRADE--VAGIGID--YR-----------END---------RPPELFWKAYRDARAAGFRTTAHAGEFGMPW 224 (380)
T ss_dssp HHHHHHHHTCCTT--BCEEEEE--SC-----------CTT---------CCGGGGHHHHHHHHHTTCEEEEEESCTTCCH
T ss_pred HHHHHHHHhCCCC--EEEEeec--CC-----------CCC---------CCHHHHHHHHHHHHHcCCCeeeeccccCCch
Confidence 3322221112222 2233322 11 000 2345678889999999999999996432 12
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEeeccCC--ChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHH
Q 008063 393 DLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLL 470 (579)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~H~~~~--~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 470 (579)
+.+.+++. ..+ ...|.|+..+ +++.++++++.+|.+.+||.+|...+ ..+.... -...|++.++
T Consensus 225 ~~i~~al~----~lg----a~RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~-----~v~~~~~-~~~HP~~~l~ 290 (380)
T 4gxw_A 225 RNVETAVD----LLH----VDRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLR-----TLPPDQW-AERHPMRKMP 290 (380)
T ss_dssp HHHHHHHH----TSC----CSEEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHH-----HSCTTTH-HHHCGGGGTG
T ss_pred HHHHHHHH----HcC----CcccccceeeccChHHHHHHHHhCceeEECCcchhhhc-----ccccccc-cccChHHHHH
Confidence 22222222 122 5689999866 56789999999999999999985211 1111111 1234799999
Q ss_pred HCCCeeeecCCCCCC-CCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 471 ANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 471 ~~Gi~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
+.|++++++||.+.. ..++-.+...+.. ..|++.++..++ +.|+.+.-.++
T Consensus 291 ~~Gv~vtinTDDp~~f~t~Ls~Ey~~~~~------------~~gls~~dl~~l-~~nsi~~sF~~ 342 (380)
T 4gxw_A 291 GLGLKIHPNTDDPTLHKVNPSEAWELMFS------------HFGFTIADLKQF-MLNGIDGAWVD 342 (380)
T ss_dssp GGTCEEEECCBSHHHHTCCHHHHHHHHHH------------TSCCCHHHHHHH-HHHHHHHSSSC
T ss_pred HCCCeEEECCCCchhhCCCHHHHHHHHHH------------HhCcCHHHHHHH-HHHHHHHHcCC
Confidence 999999999997632 2455566555443 346999996654 58988877665
No 81
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.10 E-value=0.00028 Score=71.18 Aligned_cols=160 Identities=12% Similarity=0.047 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHHHHHHhcCCCCCCceEeeccC-CChhhHHHHh-hCCcEEEeccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFG-DQGIVASMQPQ 441 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~-~~~~~~~~~~-~~~i~~~~~p~ 441 (579)
.+.+++.+++|++.|+|+.+|+... .+. ..++.+++ .+....+..+.||.. .+.+..+++. +.|..+...-.
T Consensus 168 ~~~f~aq~~~A~e~glPViiH~r~gr~a~-d~l~iL~e----~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~ 242 (363)
T 3ovg_A 168 LKALEVAARTSILTGCPILVHTQLGTMAL-EVAKHLIG----FGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGP 242 (363)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEETTCSHH-HHHHHHHH----HTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCT
T ss_pred HHHHHHHHHHHHHhCCEEEEeCCCCCCHH-HHHHHHHh----cCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCe
Confidence 3467888999999999999998521 222 44444443 233334567889984 5666667777 78888877632
Q ss_pred ccccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCCCCCCCCHHHH-------------HHHHHcccCCCCCC
Q 008063 442 HLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVADINPLCA-------------IRTAMKRIPPGWDN 506 (579)
Q Consensus 442 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 506 (579)
....+ .+.. +....++.+.+.+. ++.+.||++..++-.... .......
T Consensus 243 ~~~~~-------~~~~---~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~~~~~~~------- 305 (363)
T 3ovg_A 243 DRVKY-------YPDS---LLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLPL------- 305 (363)
T ss_dssp TCTTT-------CCHH---HHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHHH-------
T ss_pred ecccc-------CChh---HHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHHHHHHHH-------
Confidence 11100 0100 22335778888886 799999998443211111 1111110
Q ss_pred CCCCCCCCCHHHHHHHHcHHHHHhcccCCccccccCCCcccEE
Q 008063 507 AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFV 549 (579)
Q Consensus 507 ~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~I~~G~~ADlv 549 (579)
....|++.+++.++.|.||+++|++.. .+++++||.-+-|
T Consensus 306 --a~~rGis~eei~~it~~Np~rlf~l~~-~~~~~~~~~~~~~ 345 (363)
T 3ovg_A 306 --LKQVGVSKEAIFDILVNNPKRVLAFDE-KRNFDPLKVSKEV 345 (363)
T ss_dssp --HHHHTCCHHHHHHHHTHHHHHHTSCCC-CCCCCGGGSCHHH
T ss_pred --HHHcCCCHHHHHHHHHHHHHHHHCCCC-cCccCcccCCHHH
Confidence 123469999999999999999999976 6999999976544
No 82
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=98.04 E-value=2.4e-06 Score=92.52 Aligned_cols=131 Identities=14% Similarity=0.074 Sum_probs=94.7
Q ss_pred HHHHHHH-CCC---eEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhh--HHHHhhCCcEEEecccccc
Q 008063 371 MTMASDK-SGL---QVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT--AARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 371 ~~~~a~~-~g~---~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~--~~~~~~~~i~~~~~p~~~~ 444 (579)
.+..+++ .|+ ++++|+.+....+.+.+++ . + ...+.|+..+.+++ ++++++.++.+.+||.+|.
T Consensus 503 ~Ln~ar~~~Gl~~i~~t~HaGE~~~~e~l~~al----L--g----~~RIgHGv~l~edp~Li~lla~~~I~vevCP~SN~ 572 (701)
T 2a3l_A 503 VLNKLRESKGMTTITLRPHSGEAGDIDHLAATF----L--T----CHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNN 572 (701)
T ss_dssp HHHHHHTTTTCCCCEECCCCSSSSCTHHHHHHH----H--H----CSSCSCCGGGGGCHHHHHHHHHHTCCEEECHHHHT
T ss_pred HHHHHHHHcCCCCCCcccccCCCCCHHHHHHHh----c--C----CCeEEEEeecccCHHHHHHHHHcCCcEEECccchh
Confidence 3455664 687 8999997554444444442 1 1 22479999988766 8999999999999999986
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCCC----CHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHH
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI----NPLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 520 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 520 (579)
. +... -...|+..|+++|++|++|||.+.... +++.+++.+.... +++..++.
T Consensus 573 k--------l~~~---~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~------------~ls~~dl~ 629 (701)
T 2a3l_A 573 S--------LFLD---YHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVW------------KLSACDLC 629 (701)
T ss_dssp T--------TTCC---STTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHH------------TCCHHHHH
T ss_pred h--------hccC---chHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHHHHc------------CCCHHHHH
Confidence 1 2211 122389999999999999999875432 5888888776532 48999977
Q ss_pred HHHcHHHHHhcccCC
Q 008063 521 IAHTLSAARACFLEN 535 (579)
Q Consensus 521 ~~~T~npA~~lgl~~ 535 (579)
++ |.|++++.++++
T Consensus 630 ~l-a~Ns~~asfl~~ 643 (701)
T 2a3l_A 630 EI-ARNSVYQSGFSH 643 (701)
T ss_dssp HH-HHHHHHHSCCCH
T ss_pred HH-HHHHHHHhCCCH
Confidence 77 899999999864
No 83
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.03 E-value=0.00026 Score=69.66 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC---------hhhHHHHhhC-C
Q 008063 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA---------SGTAARFGDQ-G 433 (579)
Q Consensus 364 ~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~---------~~~~~~~~~~-~ 433 (579)
..+.+...++.+.+.|+++.+|+.... +..+.......+ .+..+.|+.... .+.+..+.+. |
T Consensus 135 ~~~~~~~~~~~a~~~glpv~iH~~~~~-----l~~~~~~l~~~p---~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~~n 206 (294)
T 4i6k_A 135 NTPDWQKFLRNVESLNWQVELHAPPKY-----LVQLLPQLNEYS---FDVVIDHFGRVDPVKGIEDPDYQKFLSLLNVKQ 206 (294)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEECCHHH-----HHHHHHHHTTSS---SCEEESGGGCCCTTTCTTCHHHHHHHHHCCTTT
T ss_pred ccHHHHHHHHHHHHcCCEEEEeeCcch-----HHHHHHHHHHCC---CCEEEECCCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence 347889999999999999999996321 222333333343 467788887642 1233334443 6
Q ss_pred cEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCCCC---HHHHHHHHHcccCCCCCCCC
Q 008063 434 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVADIN---PLCAIRTAMKRIPPGWDNAW 508 (579)
Q Consensus 434 i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 508 (579)
+.+.++-........+. .. .....++.+++ .|. ++.+|||+|..... .+..+...+...
T Consensus 207 v~~k~Sg~~~~~~~~~~-------~~-~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~~~l~~~-------- 270 (294)
T 4i6k_A 207 HWIKVSGFYRLGATPSN-------IN-IAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAIKAFKQI-------- 270 (294)
T ss_dssp EEEECCCGGGSSSTTHH-------HH-HHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHHHHHHHH--------
T ss_pred EEEEecccccccccCCC-------ch-hhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHHHHHHHH--------
Confidence 66665432221110000 00 11123444443 565 79999999987643 122222223221
Q ss_pred CCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 509 IPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 509 ~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
+++.++.-+....|+++++|+++
T Consensus 271 ----~~~~~~~~~i~~~NA~rl~~l~~ 293 (294)
T 4i6k_A 271 ----VFDKHEQCLILNQNPTELFGFSR 293 (294)
T ss_dssp ----CCCHHHHHHHHTHHHHHHHTC--
T ss_pred ----CCCHHHHHHHHHHCHHHHhCCCC
Confidence 27899988999999999999864
No 84
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=97.98 E-value=8.2e-05 Score=72.27 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEeccccc
Q 008063 364 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHL 443 (579)
Q Consensus 364 ~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~ 443 (579)
..+.+...++.|.+.|+++.+|+... ...+++.+ ..++....+..+ |+...+.+.++++.+.|+.+++.....
T Consensus 118 q~~~f~~~~~~a~~~~lPv~iH~~~~--~~~~~~il----~~~p~~~~~~I~-H~~~g~~~~~~~~~~~g~y~~~sg~~~ 190 (268)
T 1j6o_A 118 QKRVFVEQIELAGKLNLPLVVHIRDA--YSEAYEIL----RTESLPEKRGVI-HAFSSDYEWAKKFIDLGFLLGIGGPVT 190 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHH----HHSCCCSSCEEE-TTCCSCHHHHHHHHHHTEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCch--HHHHHHHH----HhcCCCCCCEEE-EcCCCCHHHHHHHHHCCCeEEeccccc
Confidence 35678999999999999999999632 23333333 334432345555 998888888888888898888774432
Q ss_pred ccchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCCCH----------HHHHHHHHcccCCCCCCCCCCC
Q 008063 444 LDDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADINP----------LCAIRTAMKRIPPGWDNAWIPS 511 (579)
Q Consensus 444 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 511 (579)
... ...++.+.+. +. ++.++||+|...+.+ +......+.. .
T Consensus 191 ~~~----------------~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~la~-----------~ 243 (268)
T 1j6o_A 191 YPK----------------NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQ-----------V 243 (268)
T ss_dssp CTT----------------CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHHH-----------H
T ss_pred ccc----------------hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHH-----------H
Confidence 110 0123333332 33 699999998654322 1111122211 1
Q ss_pred CCCCHHHHHHHHcHHHHHhcccC
Q 008063 512 ERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 512 ~~ls~~~al~~~T~npA~~lgl~ 534 (579)
.+++.++.-+..+.|+++++++.
T Consensus 244 ~~~~~e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 244 LGVPEAKVDEATTENARRIFLEV 266 (268)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHSC
T ss_pred hCcCHHHHHHHHHHHHHHHhCcc
Confidence 24899999999999999999874
No 85
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=97.86 E-value=0.00073 Score=66.71 Aligned_cols=137 Identities=15% Similarity=0.097 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEeccccccc
Q 008063 366 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLD 445 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~~ 445 (579)
+.+++.+++|++.|+|+.+|+... ....++.+++. +. .....+.|+...+.+.++++.+.|..+++.... ..
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a--~~~~~~il~~~----~~-~~~~~i~H~f~g~~~~~~~~l~~g~yi~~~g~~-~~ 198 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNS--HAEFLDITKRN----RD-RCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCS-LK 198 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESC--HHHHHHHHHHT----GG-GSSCEEETTCCCCHHHHHHHHHTTCEEEECGGG-SS
T ss_pred HHHHHHHHHHHHhCCcEEEEecCc--hHHHHHHHHhc----cC-CCCcEEEEccCCCHHHHHHHHhcCcEEEEcccc-cC
Confidence 567888999999999999999632 33444444432 11 113368999888888899999999998887542 10
Q ss_pred chhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCC-----------------------------C-H--HH
Q 008063 446 DADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADI-----------------------------N-P--LC 491 (579)
Q Consensus 446 ~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~-----------------------------~-~--~~ 491 (579)
.. + ...+.+. +. ++.++||+|.... + | ..
T Consensus 199 ~~-------------~----~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~ 261 (301)
T 2xio_A 199 TE-------------A----NLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHII 261 (301)
T ss_dssp SH-------------H----HHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHH
T ss_pred Ch-------------H----HHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHH
Confidence 00 0 1233333 22 6899999986421 0 1 11
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCCcccc
Q 008063 492 AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 539 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~~~G~ 539 (579)
.+...+.. -.+++.+++.+..+.|++++++++. +|-
T Consensus 262 ~~~~~ia~-----------l~g~~~e~~~~~~~~Na~rlf~~~~-~~~ 297 (301)
T 2xio_A 262 QILEIMSA-----------VRDEDPLELANTLYNNTIKVFFPVI-AEN 297 (301)
T ss_dssp HHHHHHHH-----------HHTCCHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHH-----------HHCcCHHHHHHHHHHHHHHHhCchh-hhh
Confidence 11112211 1259999999999999999999864 443
No 86
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.81 E-value=0.0014 Score=65.88 Aligned_cols=147 Identities=11% Similarity=0.062 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEee-ccCCChhhHHHHhhCCcEEEeccccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH-AQHLASGTAARFGDQGIVASMQPQHL 443 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H-~~~~~~~~~~~~~~~~i~~~~~p~~~ 443 (579)
...+++.++++++.|+|+.+|..........++.+. +.+....+..+.| |...+.+..+++.+.|..+...---.
T Consensus 192 ~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~----eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~ 267 (360)
T 3tn4_A 192 KMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLL----EHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGI 267 (360)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHH----HTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHH----HcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEccccc
Confidence 446889999999999999999964322222333332 3455555778999 67778888889999998887642110
Q ss_pred ccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCC-------CCCCCCHHHHHHH----------HHcccCCCC
Q 008063 444 LDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDW-------PVADINPLCAIRT----------AMKRIPPGW 504 (579)
Q Consensus 444 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~-------~~~~~~~~~~~~~----------~~~~~~~~~ 504 (579)
.... ..+ ... +....++.+.+.|- ++.++||. +...+.++..... .+.+
T Consensus 268 ~~~~-----~~p-~d~-~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~----- 335 (360)
T 3tn4_A 268 QGMV-----GAP-TDE-ERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPA----- 335 (360)
T ss_dssp CCST-----TCC-CHH-HHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHH-----
T ss_pred cccc-----CCC-ChH-HHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHH-----
Confidence 0000 000 001 34446788899886 79999997 3333333322111 1111
Q ss_pred CCCCCCCCCCCHHHHHHHHcHHHHHhc
Q 008063 505 DNAWIPSERISLTDALIAHTLSAARAC 531 (579)
Q Consensus 505 ~~~~~~~~~ls~~~al~~~T~npA~~l 531 (579)
..+.|++.+++-++.+.||+++|
T Consensus 336 ----L~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 336 ----LKNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp ----HHHTTCCHHHHHHHHTHHHHHHH
T ss_pred ----HHHcCCCHHHHHHHHHHhHHHHh
Confidence 02357999999999999999986
No 87
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.80 E-value=0.0016 Score=64.92 Aligned_cols=148 Identities=8% Similarity=0.006 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeecc-CCChhhHHHHhhCCcEEEeccccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQPQHL 443 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~~~~~~~~~i~~~~~p~~~ 443 (579)
.+.+++.+++|++.|+|+.+|+.........++.+++ .+....+..+.||. ..+.+...++.+.|..+...-...
T Consensus 167 ~~~f~aq~~~A~~~glPViiH~r~g~~a~~~l~iL~e----~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t 242 (330)
T 3pnz_A 167 EKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQ----ENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAK 242 (330)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECGGGCCHHHHHHHHHH----TTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTC
T ss_pred HHHHHHHHHHHHHHCCeEEEeCCCCcChHHHHHHHHH----cCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcc
Confidence 3467888999999999999998632111223444433 34333355678996 667788888999998888763221
Q ss_pred ccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCCCCCCCCH----------H-HHHHHHHcccCCCCCCCCCC
Q 008063 444 LDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVADINP----------L-CAIRTAMKRIPPGWDNAWIP 510 (579)
Q Consensus 444 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~ 510 (579)
.. +.+. . +....++.+.+.|. ++.+.||++..+.-. . ..+...+... ..
T Consensus 243 ~~-------~~~~--~-~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~l~~~--------a~ 304 (330)
T 3pnz_A 243 IK-------YAPE--S-ARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDE--------AN 304 (330)
T ss_dssp TT-------TCCH--H-HHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHHHHHH--------HH
T ss_pred cC-------CCCh--H-HHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHHHHHH--------HH
Confidence 10 0000 0 23335778888885 799999987422111 1 1111111000 02
Q ss_pred CCCCCHHH-HHHHHcHHHHHhcccC
Q 008063 511 SERISLTD-ALIAHTLSAARACFLE 534 (579)
Q Consensus 511 ~~~ls~~~-al~~~T~npA~~lgl~ 534 (579)
..|++.++ +.++.|.||+++|+++
T Consensus 305 ~~Gis~ee~i~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 305 EKGFDGEKLVKKFFVDNPARCFTFK 329 (330)
T ss_dssp HTTSCHHHHHHHHHTHHHHHHSSCC
T ss_pred HcCCCHHHHHHHHHHHhHHHHhcCC
Confidence 34699998 9999999999999974
No 88
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.78 E-value=0.00065 Score=68.66 Aligned_cols=150 Identities=14% Similarity=0.060 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecch-HHHHHHHHHHHHHHHhcCCCCCCceEeecc-CC-ChhhHHHHhhCCcEEEeccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HL-ASGTAARFGDQGIVASMQPQ 441 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~-~~~~~~~~~~~~i~~~~~p~ 441 (579)
.+.+++.+++|++.|+|+.+|+.+. .+....++.+++ .+....+..+.||. .. +.+...++.+.|..+...-.
T Consensus 189 ~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e----~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~ 264 (364)
T 3k2g_A 189 EKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEE----EGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMI 264 (364)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHH----TTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCT
T ss_pred HHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHH----cCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCC
Confidence 3457888999999999999998422 223444554433 33333355678998 45 88889999999988877632
Q ss_pred cc---ccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCCCCCC---------CC-HHHHHHHHHcccCCCCCC
Q 008063 442 HL---LDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVAD---------IN-PLCAIRTAMKRIPPGWDN 506 (579)
Q Consensus 442 ~~---~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~~~~~---------~~-~~~~~~~~~~~~~~~~~~ 506 (579)
.. ..+.. ...+... +....++.+.+.|. ++.+.||.+..+ +. ....+...+
T Consensus 265 gt~~~f~~~~----~~~~~d~-~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~~~~~l--------- 330 (364)
T 3k2g_A 265 GMDFFYADQG----VQCPSDD-EVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFLPRL--------- 330 (364)
T ss_dssp TCCCEETTTT----EECCCHH-HHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHHHHH---------
T ss_pred cccccccccc----cccccHH-HHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHHHHHHH---------
Confidence 11 00000 0000000 23345788888885 799999986422 11 112121122
Q ss_pred CCCCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 507 AWIPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 507 ~~~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
...|++.+++.++.|.||+++|+++.
T Consensus 331 ---~~~Gis~eei~~~~~~Np~rlf~l~~ 356 (364)
T 3k2g_A 331 ---RRHGLDDAALETLMVTNPRRVFDASI 356 (364)
T ss_dssp ---HHTTCCHHHHHHHHTHHHHHHHCTTS
T ss_pred ---HHcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 12469999999999999999999874
No 89
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=97.70 E-value=0.00028 Score=73.98 Aligned_cols=142 Identities=16% Similarity=0.091 Sum_probs=92.8
Q ss_pred HHHHHHHHHH--HHHCCCeEEEEecchH--H---HHHHHHHHHHHHHhcCCCCCCceEeeccCCC--hhhHHHHhhCCcE
Q 008063 365 LESLLSMTMA--SDKSGLQVAIHAIGDR--A---NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIV 435 (579)
Q Consensus 365 ~~~l~~~~~~--a~~~g~~i~iH~~g~~--~---~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~~~~~~~~~i~ 435 (579)
+..+...++. |++.|+++.+|+.+.. . ...+.+++ . .+ ...|.|+..+. ++.++++++.++.
T Consensus 308 ~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al-~----Lg----a~RIgHGv~l~~dp~l~~~l~~~~I~ 378 (508)
T 3lgd_A 308 LHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDAL-M----LN----TTRIGHGFALSKHPAVRTYSWKKDIP 378 (508)
T ss_dssp TGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHH-H----TT----CSSEEECTTGGGCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHH-h----cC----CceeeeeEecCccHHHHHHHHhcCCe
Confidence 3456667777 8899999999997431 1 22333333 1 12 45899999886 7899999999999
Q ss_pred EEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC-C-CHHHHHHHHHcccCCCCCCCCCCCCC
Q 008063 436 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD-I-NPLCAIRTAMKRIPPGWDNAWIPSER 513 (579)
Q Consensus 436 ~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (579)
+.+||.+|.. ++.... -...|++.++++|++++++||.+... . .+-.+...+..... ..+
T Consensus 379 levCP~SN~~--------l~~v~~-~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~~Ls~Ey~~a~~~~~---------~~~ 440 (508)
T 3lgd_A 379 IEVCPISNQV--------LKLVSD-LRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEVFMGIG---------GMK 440 (508)
T ss_dssp EEECHHHHHH--------TTSCSS-GGGCTHHHHHHTTCCEEECCBSHHHHTCCTTHHHHHHHHHTTS---------CTT
T ss_pred EEECcchHHH--------hCCCCC-cccChHHHHHHCCCcEEEcCCCccccCCCchHHHHHHHHHHcc---------cCC
Confidence 9999999862 221100 22458999999999999999976432 2 34455555543221 112
Q ss_pred CCHHHHHHHHcHHHHHhcccC
Q 008063 514 ISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 514 ls~~~al~~~T~npA~~lgl~ 534 (579)
++.++..++ +.|..++-.++
T Consensus 441 ~~~~~l~~L-a~NSi~~Sfl~ 460 (508)
T 3lgd_A 441 ADLRTLKQL-AMNSIKYSTLL 460 (508)
T ss_dssp CCHHHHHHH-HHHHHHTSSSC
T ss_pred CCHHHHHHH-HHHHHHHHCCC
Confidence 466765444 46877766554
No 90
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.67 E-value=0.0027 Score=63.48 Aligned_cols=143 Identities=15% Similarity=0.078 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec-chHHHHHHHHHHHHHHHhcCCCCCCceEeecc-CCChhhHHHHhhCCcEEEecccc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQPQH 442 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~~~~~~~~~i~~~~~p~~ 442 (579)
.+.+++-+++|++.|+|+.+|+. +..+.+ .++.+++ .+....+..+.||. ..+.+...++.+.|..+...-..
T Consensus 172 ~~~f~aq~~lA~~~glPViiH~~~gr~a~~-~~~iL~~----~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g~~ 246 (339)
T 3gtx_A 172 QLFFRAAARVQRETGVPIITHTQEGQQGPQ-QAELLTS----LGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIG 246 (339)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECSTTCCHHH-HHHHHHH----TTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTT
T ss_pred HHHHHHHHHHHHHHCCeEEEeCCCCcCHHH-HHHHHHH----cCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEccCc
Confidence 34578889999999999999994 222222 3444433 33333345678998 57888899999999988875432
Q ss_pred c-ccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCCCCCC-CCH-----H--------------HHHHHHHcc
Q 008063 443 L-LDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVAD-INP-----L--------------CAIRTAMKR 499 (579)
Q Consensus 443 ~-~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~~~~~-~~~-----~--------------~~~~~~~~~ 499 (579)
. .+.. .+... +....++++.+.+. ++.+.||.+... ..+ . ..+...+
T Consensus 247 t~~~~~-------~p~~~-~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~-- 316 (339)
T 3gtx_A 247 LQGMVG-------TPTDA-ERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDL-- 316 (339)
T ss_dssp CCSSTT-------CCCHH-HHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHH--
T ss_pred cccccC-------CCchH-HHHHHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHH--
Confidence 1 0000 00000 22335678888876 799999988531 110 1 1111111
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcc
Q 008063 500 IPPGWDNAWIPSERISLTDALIAHTLSAARACF 532 (579)
Q Consensus 500 ~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lg 532 (579)
...|++.+++.++.|.||+++|+
T Consensus 317 ----------~~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 317 ----------RRRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp ----------HHTTCCHHHHHHHHTHHHHHHHC
T ss_pred ----------HHcCCCHHHHHHHHHHHHHHHhC
Confidence 23569999999999999999875
No 91
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.49 E-value=0.0007 Score=67.03 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHH-CCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccc
Q 008063 366 ESLLSMTMASDK-SGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 366 ~~l~~~~~~a~~-~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
+.+++-+++|++ .++|+.+|+... .+.+++.+++. +.. ..-.+.||+..+.++++++.+.|..+++.....
T Consensus 154 ~~F~~ql~lA~e~~~lPviiH~r~A--~~d~l~iL~~~----~~~-~~~gViH~FsGs~e~a~~~l~lG~yis~~G~~~- 225 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPFFFHCRKS--WSDLCQLNKEL----GYN-GCKGVVHCFDGTEEEMNQILNEGWDIGVTGNSL- 225 (325)
T ss_dssp HHHHHTHHHHHHCTTCCEEEEEESC--HHHHHHHHHHT----TCT-TSCEEECSCCCCHHHHHHHHHTTCEEEECSGGG-
T ss_pred HHHHHHHHHHHHhhCCeEEEEeCch--HHHHHHHHHhc----CCC-CCcEEEEECCCCHHHHHHHHhcCcEEeeCcccc-
Confidence 457888999999 999999999743 24445444432 211 123577999999999999999999998887532
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCCC----------------------------------
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADIN---------------------------------- 488 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~~---------------------------------- 488 (579)
...+ .+ ++.+. .. ++.+-||+|...+.
T Consensus 226 k~~~----------------~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~ 288 (325)
T 3ipw_A 226 QSIE----------------LL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPS 288 (325)
T ss_dssp SSHH----------------HH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGG
T ss_pred CcHH----------------HH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHH
Confidence 1111 11 22221 22 48999998865211
Q ss_pred HHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 489 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
....+-..+. .-.+++++++.+..+.|.-+++++.
T Consensus 289 ~v~~v~~~iA-----------~l~g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 289 NIIDIAIIMS-----------SIKHISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp GHHHHHHHHH-----------HHHTCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHH-----------HhhCcCHHHHHHHHHHHHHHHhCcC
Confidence 1111111121 1236999999999999999999864
No 92
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.30 E-value=0.0038 Score=61.50 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=82.0
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC----------hhhHHHHhh-
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA----------SGTAARFGD- 431 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~----------~~~~~~~~~- 431 (579)
.+.+.+..+++.+.+ |+.+.+|+.... ... +......+ +.+..+.|+.... .+.++.+++
T Consensus 135 ~~~~~~~~~~~~l~~-gl~v~l~~~~~~-l~~----l~~~~~~~---~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~ 205 (303)
T 4d9a_A 135 APKDKFLEVAGRLPA-GWHVVIYFEADI-LEE----LRPFMDAI---PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSR 205 (303)
T ss_dssp CCHHHHHHHHTSCCT-TCEEEEECCGGG-HHH----HHHHHHHC---SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHhc-CCEEEEeccccc-HHH----HHHHHHHC---CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhC
Confidence 567889999999999 999999986332 222 23333333 4588999998643 234445555
Q ss_pred CCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCC-eeeecCCCCCCCCC----HHHHHHHHHcccCCCCCC
Q 008063 432 QGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWPVADIN----PLCAIRTAMKRIPPGWDN 506 (579)
Q Consensus 432 ~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi-~v~~gsD~~~~~~~----~~~~~~~~~~~~~~~~~~ 506 (579)
-++.+.++-....... +.. .....+-++.+++.+. ++++|||+|..... -+..+...+.+.
T Consensus 206 ~NV~vKlSg~~~~~~~-------~~~-~~~~~~~~~~~~~~~~dRlmfGSDwP~~~~~~~~~~~~~~~~~~~~~------ 271 (303)
T 4d9a_A 206 EDIWFKATCPDRLDPA-------GPP-WDDFARSVAPLVADYADRVIWGTAWPHPNMQDAIPDDGLVVDMIPRI------ 271 (303)
T ss_dssp TTEEEECCCHHHHCTT-------CTT-CHHHHHHHHHHHHHTTTSEECCCCTTCTTCTTSCCCHHHHHHTHHHH------
T ss_pred CCEEEEeeCceecCCC-------CCC-HHHHHHHHHHHHHhCcccEEEecCCCCcccccCCCCHHHHHHHHHHH------
Confidence 4555554422111000 000 0011122345555443 79999999977532 122222222211
Q ss_pred CCCCCCCC-CHHHHHHHHcHHHHHhcccCCccc
Q 008063 507 AWIPSERI-SLTDALIAHTLSAARACFLENDVG 538 (579)
Q Consensus 507 ~~~~~~~l-s~~~al~~~T~npA~~lgl~~~~G 538 (579)
+ +.++-=+..-.|++++++++.+-|
T Consensus 272 -------~~~~~~~~~il~~NA~rly~~~~~~~ 297 (303)
T 4d9a_A 272 -------APTPELQHKMLVTNPMRLYWSEEMEG 297 (303)
T ss_dssp -------SCSHHHHHHHHTHHHHHHHCGGGC--
T ss_pred -------CCCHHHHHHHHHHHHHHHhCCCcccc
Confidence 3 566666777889999999986544
No 93
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.26 E-value=0.00088 Score=64.40 Aligned_cols=133 Identities=15% Similarity=0.074 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEecch---HHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEec--c
Q 008063 366 ESLLSMTMASDKSGLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ--P 440 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~--p 440 (579)
+.+++.+++|++.++|+.+|+... .+.+.+++.+++ .+....+..+.|| +.+.++++.+.|..++.. |
T Consensus 110 ~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~~~~il~~----~~~~~~~~vi~H~---~~~~a~~~l~~G~yis~~~~p 182 (261)
T 3guw_A 110 EVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILES----LDFPADLAVIDHV---NFETLDMVLETEYWIGLTVQP 182 (261)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHHHH----TTCCTTSEEEESC---CTTTHHHHHTSSSEEEEECC-
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCcccchHHHHHHHHHH----cCCCCCCEEEEeC---CHHHHHHHHhCCEEEEecCCC
Confidence 457889999999999999999643 334555555544 2322224457798 678888888999888776 3
Q ss_pred cccccchhHHHHhhChhhhhhhhhhHHHHH-HCCC-eeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCC-CCCCHH
Q 008063 441 QHLLDDADSARKKLGVDRAERESYLFQSLL-ANNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPS-ERISLT 517 (579)
Q Consensus 441 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~-~~Gi-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ls~~ 517 (579)
....+ . ++ +++. .-+. ++.+.||+|..+..|.. +... .....+ .|++.
T Consensus 183 g~~t~-----~------~~-------~~~v~~ipldrlLlETD~P~~pn~P~~-----v~~~-----~~~la~~~g~~~- 233 (261)
T 3guw_A 183 GKLSA-----E------DA-------ARIVAEHGPERFMLNSDAGYRDVEITT-----VAEA-----AVKIEEAVGREE- 233 (261)
T ss_dssp -----------------CC-------TTGGGGCC-CCEEEECCCCCC-----------CCCC-----TTHHHHHCTTGG-
T ss_pred CcccH-----H------HH-------HHHHHhCCcceEEEecCCCCCCCCHHH-----HHHH-----HHHHHhhCChhH-
Confidence 32110 0 00 1111 2232 58999999874322210 0000 000011 34554
Q ss_pred HHHHHHcHHHHHhcccCC
Q 008063 518 DALIAHTLSAARACFLEN 535 (579)
Q Consensus 518 ~al~~~T~npA~~lgl~~ 535 (579)
+.+..+.|+.+++|++.
T Consensus 234 -v~~~~~~Na~rlf~~~~ 250 (261)
T 3guw_A 234 -MEKVARENARKFLRVLE 250 (261)
T ss_dssp -GGHHHHSSHHHHTTC--
T ss_pred -HHHHHHHHHHHHHCCCc
Confidence 67788889999999875
No 94
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.25 E-value=0.0026 Score=63.36 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=36.4
Q ss_pred HHHHHHC-CC-eeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 466 FQSLLAN-NA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 466 l~~l~~~-Gi-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
++.+.+. |. ++.+|||+|...+ -..+ ..+.. .+++.++.-+..+.|+++++|++
T Consensus 270 ~~~~~~~~g~dril~gSD~P~~~~--~~~~-~~~~~------------~~l~~~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 270 LIDAILEIGADRILFSTDWPFENI--DHAS-DWFNA------------TSIAEADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp HHHHHTTTCGGGEECCCCTTTSCH--HHHH-HHHHH------------SSSCHHHHHHHHTHHHHHHTTCC
T ss_pred HHHHHHHhCcccEEEecCCCCccH--HHHH-HHHHH------------CCCCHHHHHHHHHHhHHHHhCCC
Confidence 4455543 44 7999999986532 1221 22221 14899999999999999999984
No 95
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.16 E-value=0.0015 Score=66.08 Aligned_cols=153 Identities=16% Similarity=0.108 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHC-CCeEEEEecch-HHHHHHHHHHHHHHHhcCCCCCCceEeecc-C-CChhhHHHHhhCCcEEEecc
Q 008063 365 LESLLSMTMASDKS-GLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-H-LASGTAARFGDQGIVASMQP 440 (579)
Q Consensus 365 ~~~l~~~~~~a~~~-g~~i~iH~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~-~~~~~~~~~~~~~i~~~~~p 440 (579)
.+.+++.+++|++. |+|+.+|+.++ .+....++.+.+ ..+....+..+.||. . .+.+...++.+.|..+...-
T Consensus 178 ~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e---~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g 254 (365)
T 3rhg_A 178 KNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLT---EMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDM 254 (365)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTT---TTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHh---ccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecC
Confidence 34578889999999 99999998321 223344443322 113333355678999 4 68888999999999888763
Q ss_pred ccc-ccchhHHHHhhChhhhhhhhhhHHHHHHCCC--eeeecCCCCCCCCCH----------HHHHHHHHcccCCCCCCC
Q 008063 441 QHL-LDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVADINP----------LCAIRTAMKRIPPGWDNA 507 (579)
Q Consensus 441 ~~~-~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi--~v~~gsD~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 507 (579)
... ....+. .. .+... +....++.+.+.|. ++.+.||.+..++-+ +..+...+
T Consensus 255 ~g~~~tf~~~--~~-~~~d~-~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~~~~~~~~---------- 320 (365)
T 3rhg_A 255 IGLDISFPKE--GA-APSVM-DTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVPNVFLSLL---------- 320 (365)
T ss_dssp TTCCCBCSSS--CB-CCCHH-HHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHHHTHHHHH----------
T ss_pred CCcccccccc--cc-ccchH-HHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHHHHHHHHH----------
Confidence 210 000000 00 00000 23335788888886 799999987643211 11111111
Q ss_pred CCCCCCCCHHHHHHHHcHHHHHhcccCCc
Q 008063 508 WIPSERISLTDALIAHTLSAARACFLEND 536 (579)
Q Consensus 508 ~~~~~~ls~~~al~~~T~npA~~lgl~~~ 536 (579)
...|++.+++.++.|.||+++|+++.+
T Consensus 321 --~~~Gis~e~i~~~~~~Np~rlf~l~~~ 347 (365)
T 3rhg_A 321 --AQRGIDKTIIDKLCIDNPANLLAAENL 347 (365)
T ss_dssp --HHTTCCHHHHHHHTTHHHHHHHHSCCS
T ss_pred --HHcCCCHHHHHHHHHHHHHHHHCCCCc
Confidence 234699999999999999999998753
No 96
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=96.18 E-value=0.028 Score=53.49 Aligned_cols=133 Identities=12% Similarity=0.056 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHCCCeEE-EEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccccc
Q 008063 366 ESLLSMTMASDKSGLQVA-IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 444 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~-iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~~~ 444 (579)
+.+++.+++|++.++|+. +|+... .+.+++.+++. +. ..-.+.|+...+.+.++++.+.|..++..+....
T Consensus 104 ~~F~~ql~lA~e~~lPviSiH~r~a--~~~~~~il~~~----~~--~~~~v~H~fsG~~e~a~~~l~~G~yis~~g~~~~ 175 (254)
T 3gg7_A 104 AVFQHILRRCEDHGGRILSIHSRRA--ESEVLNCLEAN----PR--SGTPILHWYSGSVTELRRAISLGCWFSVGPTMVR 175 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTC--HHHHHHHHHHC----GG--GEEEEEETCCSCHHHHHHHHHTTCEEEECHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCc--HHHHHHHHHHc----CC--CCcEEEEeCCCCHHHHHHHHcCCcEEEECcccCc
Confidence 457889999999999998 999643 34455555443 11 1124779999999999999999998887754320
Q ss_pred cchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCC-------CHHHHHHHHHcccCCCCCCCCCCCCCCC
Q 008063 445 DDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADI-------NPLCAIRTAMKRIPPGWDNAWIPSERIS 515 (579)
Q Consensus 445 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ls 515 (579)
.+ .++++.+. +. ++.+.||+|..+. .........+.. ..+++
T Consensus 176 --~~----------------~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~~~iA~-----------~~g~~ 226 (254)
T 3gg7_A 176 --TQ----------------KGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLSK-----------IWQIP 226 (254)
T ss_dssp --SH----------------HHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHHHHHHH-----------HHTSC
T ss_pred --hH----------------HHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHHHHHHH-----------HhCcC
Confidence 00 12233332 22 5899999986531 112222222221 13589
Q ss_pred HHHHHHHHcHHHHHhcccCC
Q 008063 516 LTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 516 ~~~al~~~T~npA~~lgl~~ 535 (579)
.+++.+..+.|+.+++++..
T Consensus 227 ~ee~~~~~~~N~~~lf~~~~ 246 (254)
T 3gg7_A 227 ASEVERIVKENVSRLLGTVR 246 (254)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHCCCc
Confidence 99999999999999998753
No 97
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=95.53 E-value=0.047 Score=52.96 Aligned_cols=144 Identities=15% Similarity=0.087 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCC---------hhhHHHHhhC-Cc
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA---------SGTAARFGDQ-GI 434 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~---------~~~~~~~~~~-~i 434 (579)
.+.+..+++.+.++|+++.+|+.... .. .+......++ .+..+.|+.... .+.+..+.+. ++
T Consensus 123 ~~~~~~~~~~a~~~~lpv~iH~~~~~-~~----~~~~~~~~~p---l~~vi~H~g~~~~~~~~~~~~~~~~~~l~~~~n~ 194 (288)
T 2ffi_A 123 GAQWRPLLERIGEQGWHVELHRQVAD-IP----VLVRALQPYG---LDIVIDHFGRPDARRGLGQPGFAELLTLSGRGKV 194 (288)
T ss_dssp STTTHHHHHHHHHHTCEEEECSCTTT-HH----HHHHHHTTTT---CCEEESGGGSCCTTSCTTCTTHHHHTTCCCCSCE
T ss_pred cHHHHHHHHHHHHCCCeEEEeechhh-HH----HHHHHHHHCC---CCEEEECCCCCCCCCCCCChhHHHHHHHHhCCCE
Confidence 35678899999999999999986321 11 2233334444 467888998765 2444444443 56
Q ss_pred EEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCCC---HHHHHHHHHcccCCCCCCCCC
Q 008063 435 VASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADIN---PLCAIRTAMKRIPPGWDNAWI 509 (579)
Q Consensus 435 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 509 (579)
.+.++............ . . .....++.+.+. |. ++.+|||+|..... .+......+...
T Consensus 195 y~~~sg~~~~~~~~~~~--~----~-~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~~~~~--------- 258 (288)
T 2ffi_A 195 WVKVSGIYRLQGSPEEN--L----A-FARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQFEAL--------- 258 (288)
T ss_dssp EEEEECGGGSSSCHHHH--H----H-HHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHHHHHH---------
T ss_pred EEEeCcchhhccccCCC--H----H-HHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHHHHHH---------
Confidence 55554332211000000 0 0 111234555554 65 79999999876531 222222233221
Q ss_pred CCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 510 PSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 510 ~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
+++.++.-+....|++++++++.
T Consensus 259 ---~~~~~~~~~i~~~NA~rl~~l~~ 281 (288)
T 2ffi_A 259 ---GCSAQLRQALLLDTARALFGFEL 281 (288)
T ss_dssp ---CCCHHHHHHHHTHHHHHHTTCCC
T ss_pred ---CCCHHHHHHHHHHCHHHHhCccc
Confidence 25888888899999999999863
No 98
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=95.13 E-value=0.11 Score=50.00 Aligned_cols=129 Identities=15% Similarity=0.050 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHC-CCeEEEEecch---HHHHHHHHHHHHHHHhcCCCCCCceEeeccCCCh-hhHHHHhh-CCcEEEec
Q 008063 366 ESLLSMTMASDKS-GLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGD-QGIVASMQ 439 (579)
Q Consensus 366 ~~l~~~~~~a~~~-g~~i~iH~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-~~~~~~~~-~~i~~~~~ 439 (579)
+.+...++.+.+. |+++.+|+... ..... +......++ +.+..+.|+..... +.++.+.+ .|+.+.++
T Consensus 130 ~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~----~~~~l~~~p--~l~iv~~H~G~~~~~~~~~~~~~~~~~y~~~s 203 (272)
T 3cjp_A 130 KSLKPIFKYSMDSGSLPIWIHAFNPLVLQDIKE----IAELCKAFP--KVPVILGHMGGSNWMTAVELAKEIQNLYLDTS 203 (272)
T ss_dssp GGGHHHHHHHHHTTCCCEEECCSTTCCHHHHHH----HHHHHHHST--TSCEEEGGGGGGGHHHHHHHHHHCTTEEEECT
T ss_pred HHHHHHHHHHHhccCCcEEEeCCCCCccccHHH----HHHHHHHCC--CceEEEECCCCccHHHHHHHHHhCCCEEEEec
Confidence 4688999999999 99999999632 22222 233344444 34555666654322 22233333 46666655
Q ss_pred ccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCCeeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHH
Q 008063 440 PQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTD 518 (579)
Q Consensus 440 p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 518 (579)
..... . .++.+.+ .+-++.+|||+|...+... ...+.. .+++.++
T Consensus 204 ~~~~~---~----------------~~~~~~~~~~dril~gSD~P~~~~~~~---~~~~~~------------~~l~~~~ 249 (272)
T 3cjp_A 204 AYFST---F----------------VLKIVINELPLKCIFGTDMPFGDLQLS---IEAIKK------------MSNDSYV 249 (272)
T ss_dssp TCSCH---H----------------HHHHHHHHSTTTEECCCCTTSSCHHHH---HHHHHH------------HCSSHHH
T ss_pred ccccH---H----------------HHHHHHHhCCCeEEEeCCCCCCChHHH---HHHHHh------------cCCCHHH
Confidence 43221 0 1122222 3468999999987543221 122211 2489999
Q ss_pred HHHHHcHHHHHhcccC
Q 008063 519 ALIAHTLSAARACFLE 534 (579)
Q Consensus 519 al~~~T~npA~~lgl~ 534 (579)
.-+....|+++++|++
T Consensus 250 ~~~i~~~Na~rl~~l~ 265 (272)
T 3cjp_A 250 ANAVLGDNISRLLNIE 265 (272)
T ss_dssp HHHHHTHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999999986
No 99
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=94.49 E-value=0.67 Score=43.68 Aligned_cols=90 Identities=11% Similarity=0.048 Sum_probs=50.9
Q ss_pred ChhhHHHHhhCCcEEEeccccc--ccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC--CCHHHHHHHHH
Q 008063 422 ASGTAARFGDQGIVASMQPQHL--LDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INPLCAIRTAM 497 (579)
Q Consensus 422 ~~~~~~~~~~~~i~~~~~p~~~--~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~--~~~~~~~~~~~ 497 (579)
.++.++.+++.|+.+.++..+. .. ..+.... ....-++.+.+.|+.+.+|||.-... ...+......+
T Consensus 150 ~~~~l~~l~~~G~~lEiN~~s~~~~~-------~~g~~~~-~~~~~~~~~~~~gl~~~~GSDaH~~~~~~~~~~~a~~~l 221 (247)
T 2wje_A 150 NEKRVRELIDMGCYTQVNSSHVLKPK-------LFGERYK-FMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLV 221 (247)
T ss_dssp CHHHHHHHHHTTCEEEEEHHHHSCCC-------SSCCSCH-HHHHHHHHHHHTTCCSEEECCBCCSSSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEecHhhHhcC-------CCCCcCh-HHHHHHHHHHHCCCeEEEEeCCCCCcccChhHHHHHHHH
Confidence 3567888889998877664433 21 0110000 11223566778999999999965432 23344444444
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcc
Q 008063 498 KRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 532 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lg 532 (579)
.+. +..+.+-.+...||.+.+.
T Consensus 222 ~~~-------------~G~~~~~~l~~~n~~~i~~ 243 (247)
T 2wje_A 222 TQK-------------YGEAKAQELFIDNPRKIVM 243 (247)
T ss_dssp HHH-------------HCHHHHHHHHTHHHHHHHT
T ss_pred HHH-------------hCHHHHHHHHHHHHHHHHc
Confidence 221 2455555555579988875
No 100
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=93.50 E-value=0.24 Score=48.16 Aligned_cols=139 Identities=13% Similarity=0.047 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHCCCeEEEEecchH-------HHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHh-h-CCc
Q 008063 364 ELESLLSMTMASDKSGLQVAIHAIGDR-------ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFG-D-QGI 434 (579)
Q Consensus 364 ~~~~l~~~~~~a~~~g~~i~iH~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~-~-~~i 434 (579)
..+.+..+++.+.+.|+++.+|+.... .... +..+...++ +.+..+.|+.....+++..+. + .++
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~~~~~p~~----~~~v~~~~P--~l~ivl~H~G~~~~~~~~~l~~~~~nv 209 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEH----IDRVLGDFP--DLTVVSSHGNWPWVQEIIHVAFRRPNL 209 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHH----HHHHHHHCT--TCCEEEEGGGTTCHHHHHHHHHHCTTE
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCCCCCccCCHHH----HHHHHHHCC--CCEEEeecCCcccHHHHHHHHhHCCCe
Confidence 345788999999999999999986420 0112 233334443 557788998765444333332 2 355
Q ss_pred EEEecccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCC
Q 008063 435 VASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSE 512 (579)
Q Consensus 435 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (579)
.+... ..... .+ ....+..+.+ .|. ++.+|||+|...+ ...+ ..+.. .
T Consensus 210 y~~~S--g~~~~-------~~------~~~~~~~~~~~~g~drllfgSD~P~~~~--~~~~-~~~~~------------l 259 (291)
T 3irs_A 210 YLSPD--MYLYN-------LP------GHADFIQAANSFLADRMLFGTAYPMCPL--KEYT-EWFLT------------L 259 (291)
T ss_dssp EEECG--GGGSS-------ST------THHHHHHHHTTGGGGTBCCCCCBTSSCH--HHHH-HHHHT------------S
T ss_pred EecHH--HHhcc-------CC------CHHHHHHHHHHhCcceEEEecCCCCCCH--HHHH-HHHHH------------C
Confidence 54432 21100 00 0012233333 344 6999999987642 2222 22221 2
Q ss_pred CCCHHHHHHHHcHHHHHhcccCCccc
Q 008063 513 RISLTDALIAHTLSAARACFLENDVG 538 (579)
Q Consensus 513 ~ls~~~al~~~T~npA~~lgl~~~~G 538 (579)
+++.++.-+....|++++++++.+-|
T Consensus 260 ~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 260 PIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp SCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred CCCHHHHHHHHHHHHHHHhCcccccc
Confidence 58999999999999999999987655
No 101
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=92.52 E-value=3.4 Score=39.21 Aligned_cols=87 Identities=10% Similarity=-0.005 Sum_probs=48.4
Q ss_pred hhhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCCCCC--CCHHHHHHHHHccc
Q 008063 423 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INPLCAIRTAMKRI 500 (579)
Q Consensus 423 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~~~~--~~~~~~~~~~~~~~ 500 (579)
++.+..+++.|+.+.++..+... ..+. ......+.+.+.|+.+++|||.-... ...+......+...
T Consensus 147 ~~~l~~l~~~G~~iEiN~~s~~g-------~~g~----~~~~~~~~~~~~gl~~~igSDaH~~~~r~~~~~~a~~~l~~~ 215 (262)
T 3qy7_A 147 PSLLYHLVEKGAASQITSGSLAG-------IFGK----QLKAFSLRLVEANLIHFVASDAHNVKTRNFHTQEALYVLEKE 215 (262)
T ss_dssp THHHHHHHHTTCEEEEEHHHHHT-------TTCH----HHHHHHHHHHHTTCCCEEECCBCSSSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCccCc-------ccch----HHHHHHHHHHhCCCeEEEEccCCCCCCCCchHHHHHHHHHHH
Confidence 34577788888776665443320 1111 12224577889999999999964332 22233333333210
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 501 PPGWDNAWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 501 ~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
+..+.+-+ ...||.+.+.-.
T Consensus 216 -------------~G~~~a~~-~~~n~~~il~~~ 235 (262)
T 3qy7_A 216 -------------FGSELPYM-LTENAELLLRNQ 235 (262)
T ss_dssp -------------HCSHHHHH-HHHHHHHHHTTC
T ss_pred -------------hCHHHHHH-HHHHHHHHHCCC
Confidence 23344444 557999988643
No 102
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=92.27 E-value=0.32 Score=47.33 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHCCCeEEEEecchHH-------------HH-------HHHH-HHHHHHHhcCCCCCCceEeeccCCCh-
Q 008063 366 ESLLSMTMASDKSGLQVAIHAIGDRA-------------ND-------LVLD-MYKSVVVTTGKRDQRFRIEHAQHLAS- 423 (579)
Q Consensus 366 ~~l~~~~~~a~~~g~~i~iH~~g~~~-------------~~-------~~~~-~~~~~~~~~~~~~~~~~i~H~~~~~~- 423 (579)
+.+...++.+.++|+++.+|+..... .. .+.+ .+......++ +.+..+.|+....+
T Consensus 135 ~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~P--~l~~v~~H~gg~~p~ 212 (307)
T 2f6k_A 135 PVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKYP--NIKVIIPHAGAFLGI 212 (307)
T ss_dssp GGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHCT--TCEEEESGGGTTHHH
T ss_pred HhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchHHHHHHHHHHHhcCccccCC--CCeEEccCCCccchh
Confidence 56888999999999999999863211 11 0111 1122344444 45677888853211
Q ss_pred --------------hhHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCC
Q 008063 424 --------------GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADI 487 (579)
Q Consensus 424 --------------~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~ 487 (579)
+....... |+.+.++..... ..++.+.+. |. ++.+|||+|....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~-n~y~~~s~~~~~-------------------~~l~~~~~~~g~drll~gSD~P~~~~ 272 (307)
T 2f6k_A 213 VDDRIAQYAQKVYQVDVYDVMH-HVYFDVAGAVLP-------------------RQLPTLMSLAQPEHLLYGSDIPYTPL 272 (307)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHH-HSEEECCSSCTT-------------------THHHHHTTTSCGGGEECCCCTTTSCH
T ss_pred hHHHHHhhccccCcccHHHHHh-heEEeccCCCCH-------------------HHHHHHHHhcCcccEEEecCCCCCCc
Confidence 11222223 565554433210 123444443 44 7999999987654
Q ss_pred CHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 488 NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
.........+.. ..+++.++.-+....|+++++|+
T Consensus 273 ~~~~~~~~~l~~-----------~~~l~~~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 273 DGSRQLGHALAT-----------TDLLTNEQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHHHHHHHHH-----------CTTSCHHHHHHHHTHHHHHHHHC
T ss_pred hhHHHHHHHHhh-----------ccCCCHHHHHHHHHHHHHHHhCc
Confidence 322222222211 12489999888889999998864
No 103
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=90.37 E-value=2.6 Score=40.83 Aligned_cols=151 Identities=14% Similarity=0.130 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCCh--------------hhHHHHh
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS--------------GTAARFG 430 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~--------------~~~~~~~ 430 (579)
.+.+...++.+.++|+++.+|+.... ... +......++ +.+..+.|+..... +.+..++
T Consensus 121 ~~~~~~~~~~~~~~glpv~ih~~~~~-l~~----l~~ll~~~P--~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la 193 (303)
T 4do7_A 121 DADFARGVAWLQANDYVYDVLVFERQ-LPD----VQAFCARHD--AHWLVLDHAGKPALAEFDRDDTALARWRAALRELA 193 (303)
T ss_dssp CHHHHHHHHHHHHTTCEEEECCCGGG-HHH----HHHHHHHCC--SSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEecCHHH-HHH----HHHHHHHCC--CCCEEEeCCCCCCccccccccchHHHHHHHHHHHH
Confidence 45788999999999999999986431 122 233333333 56889999987532 2344455
Q ss_pred hC-CcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCCC-CHHHHHHHHHcc-cCCCCC
Q 008063 431 DQ-GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVADI-NPLCAIRTAMKR-IPPGWD 505 (579)
Q Consensus 431 ~~-~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~~-~~~~~~~~~~~~-~~~~~~ 505 (579)
+. ++.+.++-........ ............+-++.+++ .|. ++++|||+|.... ..+......+.. .
T Consensus 194 ~~~nv~~klSg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~~~~~~~~~~~~~~~~~~----- 265 (303)
T 4do7_A 194 ALPHVVCKLSGLVTEADWR---RGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWA----- 265 (303)
T ss_dssp TSTTEEEEECSCGGGSCTT---TCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGGGGTCCHHHHHHHHHHHH-----
T ss_pred hCCCEEEEeCCcccccccc---ccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCCcCcCCHHHHHHHHHHHH-----
Confidence 44 5555544222111000 00000000011112344444 355 7999999987642 122222222211 0
Q ss_pred CCCCCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 506 NAWIPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 506 ~~~~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
..+++.++.=+....|+++++|++.
T Consensus 266 -----~~~l~~~~~~~i~~~Na~rl~~l~~ 290 (303)
T 4do7_A 266 -----ESRLSAAERSALWGGTAARCYALPE 290 (303)
T ss_dssp -----HHHCCHHHHHHHTTHHHHHHTTCC-
T ss_pred -----hcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 0137888888888899999999864
No 104
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=88.05 E-value=3.9 Score=39.88 Aligned_cols=136 Identities=13% Similarity=0.027 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecchH--------------HHHHHHHHH-HHHHHhcCCCCCCceEeeccCCChhhHHHH
Q 008063 365 LESLLSMTMASDKSGLQVAIHAIGDR--------------ANDLVLDMY-KSVVVTTGKRDQRFRIEHAQHLASGTAARF 429 (579)
Q Consensus 365 ~~~l~~~~~~a~~~g~~i~iH~~g~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~ 429 (579)
.+.+..+.+.+.+.|+++.+|..... ....+...+ ..+...+| +.+..+.|+...-+-.++++
T Consensus 141 d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~~~li~~gv~~rfP--~Lkii~~H~Gg~~P~~~~r~ 218 (312)
T 3ij6_A 141 DKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQDYP--NLKILVHHAGAMVPFFSGRI 218 (312)
T ss_dssp STTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHHHCT--TCCEEESGGGTTTTTSHHHH
T ss_pred CccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHcChHhhCC--CCeEEecCCcccHHHHHHHH
Confidence 34678889999999999999985221 011111111 22344444 67888999873222222222
Q ss_pred h----------hCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHH-HCCC-eeeecCCCCCCC-C-CHHHHHHH
Q 008063 430 G----------DQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLL-ANNA-LLALGSDWPVAD-I-NPLCAIRT 495 (579)
Q Consensus 430 ~----------~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~-~~Gi-~v~~gsD~~~~~-~-~~~~~~~~ 495 (579)
. -.++.+..+-.... ..++.+. ..|. ++.+|||.|... + ........
T Consensus 219 ~~~~~~~~~~~~~nvy~dts~~~~~-------------------~~l~~~~~~~g~drilfgSD~P~~~~p~~~~~~~~~ 279 (312)
T 3ij6_A 219 DHILDEKHAQDFKKFYVDTAILGNT-------------------PALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIITQ 279 (312)
T ss_dssp HHHSCHHHHHHGGGCEEECCSSSCH-------------------HHHHHHHHHHCGGGEECCCCBTSSSTTTCSHHHHHH
T ss_pred HHhcccchHHHcCeEEEeCCCCCCH-------------------HHHHHHHHhCCCCeEEEeCCCCCCcCCCcchHHHHH
Confidence 1 12343333211110 0122333 2344 699999998764 2 22222223
Q ss_pred HHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 496 AMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
.+.. .+++.++.-+....|+++++|.
T Consensus 280 ~l~~------------l~l~~~~~~~i~~~NA~rl~~~ 305 (312)
T 3ij6_A 280 AIND------------LTISDKDKQKIFHDNYYSLIKE 305 (312)
T ss_dssp HHHT------------SSSCHHHHHHHHTHHHHHHHCC
T ss_pred HHHH------------cCCCHHHHHHHHHHHHHHHHhC
Confidence 3332 2489999888999999999875
No 105
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=87.74 E-value=3.8 Score=37.46 Aligned_cols=102 Identities=11% Similarity=-0.102 Sum_probs=64.7
Q ss_pred CceEeeccCC------ChhhHHHHhhCCcEEEecccccccchhHHHHhhChhhh---hhhhhhHHHHHHCCCeeeecCCC
Q 008063 412 RFRIEHAQHL------ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA---ERESYLFQSLLANNALLALGSDW 482 (579)
Q Consensus 412 ~~~i~H~~~~------~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~---~~~~~~l~~l~~~Gi~v~~gsD~ 482 (579)
-..+.|.... +.+.++..++.|+.+.++-.+...... ..|. .....-++...+.|+++.++||.
T Consensus 97 vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~-------~~R~~~~~~~~~il~l~k~~g~~ivisSDA 169 (212)
T 1v77_A 97 VDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNP-------YERANLLRFMMKAWKLVEKYKVRRFLTSSA 169 (212)
T ss_dssp CSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCH-------HHHHHHHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred CCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCc-------chHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 5577887654 567778889999999998776421100 0111 01112344556779999999997
Q ss_pred CCCC--CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 483 PVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 483 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
.... .++......+ ...|++.++++++.|.+|.+.+..
T Consensus 170 h~~~~v~~~~~~~~l~-------------~~~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 170 QEKWDVRYPRDLISLG-------------VVIGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp SSGGGCCCHHHHHHHH-------------HHTTCCHHHHHHTTTHHHHHHHC-
T ss_pred CChhhcCCHHHHHHHH-------------HHcCCCHHHHHHHHHHHHHHHHHh
Confidence 5332 3333333322 234699999999999999998753
No 106
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=87.20 E-value=3.5 Score=41.12 Aligned_cols=49 Identities=10% Similarity=0.061 Sum_probs=34.6
Q ss_pred CCC-eeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccCC
Q 008063 472 NNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 535 (579)
Q Consensus 472 ~Gi-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~~ 535 (579)
.|. ++.+|||.|...+.... ..+ ...+++.++.-+....|+++++|++.
T Consensus 306 ~g~drilfgSD~P~~~~~~~~---~~~------------~~~~l~~~~~~~i~~~NA~rl~~l~~ 355 (357)
T 3nur_A 306 VGIDRILYAADYPYIEPEKLG---VFL------------DELGLTDEEKEKISYTNGAKLLGLSS 355 (357)
T ss_dssp HCGGGBCBCCCTTTCCCTTHH---HHT------------TSSCCCHHHHHHHHTHHHHHHHTC--
T ss_pred cCCceEEEeCCCCCCCchHHH---HHH------------HHcCCCHHHHHHHHhHHHHHHhCCCC
Confidence 454 79999999987654321 111 12359999999999999999999863
No 107
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=85.40 E-value=3.6 Score=41.45 Aligned_cols=74 Identities=11% Similarity=-0.004 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHC----CCeEEEEecchHHHHHHHHHHHHHHHhc---------------------CCCCCCceEeeccC
Q 008063 366 ESLLSMTMASDKS----GLQVAIHAIGDRANDLVLDMYKSVVVTT---------------------GKRDQRFRIEHAQH 420 (579)
Q Consensus 366 ~~l~~~~~~a~~~----g~~i~iH~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~i~H~~~ 420 (579)
+.+++-+++|.+. ++|+.+|+... .+.+++.+++..... ......-.+.||+.
T Consensus 179 ~~F~~QL~LA~e~~~~~~lPv~IH~R~A--~~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~H~Fs 256 (401)
T 3e2v_A 179 VFFEEQLKISCLNDKLSSYPLFLHMRSA--CDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVHSFT 256 (401)
T ss_dssp HHHHHHHHHTTSSHHHHTSCEEEEEESC--HHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCEEECSCC
T ss_pred HHHHHHHHHHHhhhccCCCeEEEEecch--HHHHHHHHHHhhccccccccccccccccccccccccccCCCCcEEEEcCC
Confidence 3467789999999 99999999743 245555555543210 00011347899999
Q ss_pred CChhhHHHHhhCC--cEEEeccc
Q 008063 421 LASGTAARFGDQG--IVASMQPQ 441 (579)
Q Consensus 421 ~~~~~~~~~~~~~--i~~~~~p~ 441 (579)
.+.++++++.+.| ..+++...
T Consensus 257 Gs~e~a~~~l~lG~~~yis~~g~ 279 (401)
T 3e2v_A 257 GSAIDLQKLLNLSPNIFIGVNGC 279 (401)
T ss_dssp CCHHHHHHHHHHCTTEEEEECGG
T ss_pred CCHHHHHHHHhCCCCEEEEeCCE
Confidence 9999999999988 88888765
No 108
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=83.34 E-value=5 Score=40.22 Aligned_cols=46 Identities=15% Similarity=0.141 Sum_probs=32.7
Q ss_pred CC-eeeecCCCCCCCCCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 473 NA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 473 Gi-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
|. ++.+|||.|...... .+ ..+. ..+++.++.-+....|+++++|+
T Consensus 327 g~drilfgSD~P~~~~~~--~~-~~l~------------~~~l~~e~~~~I~~~NA~rlf~L 373 (373)
T 4inf_A 327 GEDRVMYAMDYPYQYVAD--EV-RAMD------------AMDMSAQTKKKFFQTNAEKWFKL 373 (373)
T ss_dssp CGGGEECCCCTTTTCCHH--HH-HHHH------------TCSCCHHHHHHHHTHHHHHHTTC
T ss_pred CcceEEEecCCCCCccHH--HH-HHHH------------hCCCCHHHHHHHHhHHHHHHhCc
Confidence 44 699999998776532 11 1221 13589999888999999999875
No 109
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=81.75 E-value=11 Score=36.95 Aligned_cols=25 Identities=8% Similarity=0.231 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEec
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAI 387 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~ 387 (579)
.+.+.+..+++.+.++|+++.+|+.
T Consensus 155 l~d~~~~p~~~~~~e~~lpv~iH~~ 179 (334)
T 2hbv_A 155 LDDATLEAFLTHCANEDIPILVHPW 179 (334)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCcHHHHHHHHHHHHCCCEEEECCC
Confidence 3457899999999999999999986
No 110
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=79.11 E-value=11 Score=37.26 Aligned_cols=137 Identities=10% Similarity=-0.064 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHCCCeEEEEecchHHH-------H----HHHHH----HHHHHHhcCCCCCCceEeeccCCChhhHH-
Q 008063 364 ELESLLSMTMASDKSGLQVAIHAIGDRAN-------D----LVLDM----YKSVVVTTGKRDQRFRIEHAQHLASGTAA- 427 (579)
Q Consensus 364 ~~~~l~~~~~~a~~~g~~i~iH~~g~~~~-------~----~~~~~----~~~~~~~~~~~~~~~~i~H~~~~~~~~~~- 427 (579)
..+.+..+++.+.+.|+++.+|+...... . ..+.. +..+...++ +.+..+.|+...-+-.+.
T Consensus 157 ~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~~~P--~l~~vi~H~Gg~~p~~~~r 234 (350)
T 2gwg_A 157 TDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFKDFP--ELKFVIPHGGGAVPYHWGR 234 (350)
T ss_dssp TSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHHHCT--TCCEEESGGGTTTGGGHHH
T ss_pred CCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccccCC--CCcEEeccCCCcchhhHHH
Confidence 45678999999999999999998643210 0 11100 112334444 567889999732221111
Q ss_pred --------------HHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCCCC--H
Q 008063 428 --------------RFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVADIN--P 489 (579)
Q Consensus 428 --------------~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~~~--~ 489 (579)
.....++.+.++.... ..++.+.+ .|. ++.+|||+|..... +
T Consensus 235 ~~~~~~~~~~~~l~~~~~~n~y~d~s~~~~--------------------~~l~~l~~~~g~dril~gSD~P~~~~~~~p 294 (350)
T 2gwg_A 235 FRGLAQEMKKPLLEDHVLNNIFFDTCVYHQ--------------------PGIDLLNTVIPVDNVLFASEMIGAVRGIDP 294 (350)
T ss_dssp HHHHHHHTTCCCHHHHTTTTEEEECCCCSH--------------------HHHHHHHHHSCGGGEECCCCCSSSCCCEET
T ss_pred HHHHHHhccCCCcHHHHhhcEEEEecccCc--------------------HHHHHHHHHhCcccEEEecCCCCCcccCCc
Confidence 1122355554443110 12344443 354 79999999865321 1
Q ss_pred -----HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 490 -----LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 490 -----~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
+......+.. ..+++.++.-+....|+++++++
T Consensus 295 ~~~~~~~~~~~~l~~-----------~~~l~~~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 295 RTGFYYDDTKRYIEA-----------STILTPEEKQQIYEGNARRVYPR 332 (350)
T ss_dssp TTTEETTCTHHHHHH-----------CSSSCHHHHHHHHTHHHHHHCHH
T ss_pred ccccchhhHHHHHHh-----------ccCCCHHHHHHHHHHHHHHHHHh
Confidence 0111111111 12489999889999999999976
No 111
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=78.57 E-value=8.1 Score=37.80 Aligned_cols=136 Identities=9% Similarity=0.115 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeecc---------CCChhhHHHHhhCCcEEE
Q 008063 367 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVAS 437 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~---------~~~~~~~~~~~~~~i~~~ 437 (579)
.=+++++...+.|+.+.+-..++.....+++.. ..+..++|.. .++++.++.+++.|..+-
T Consensus 140 ~G~~vV~emnrlGmivDlSH~s~~~~~dvl~~s----------~~Pvi~SHsn~~al~~h~RNl~De~irala~~GGvig 209 (325)
T 2i5g_A 140 FGREIVAEMNRVGIMCDLSHVGSKTSEEVILES----------KKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFVG 209 (325)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHC----------SSCCEEEEECBTTTCCCTTSBCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCcEEEcCcCCHHHHHHHHHHh----------CCCEEEeCCCccccCCCCCCCCHHHHHHHHHcCCeEE
Confidence 457788888999999987544555555444432 1356777774 457899999999987775
Q ss_pred ec--ccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCC---------------------------
Q 008063 438 MQ--PQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVAD--------------------------- 486 (579)
Q Consensus 438 ~~--p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~--------------------------- 486 (579)
++ |.+....... ........+..+.+ .|+ .|++|||.+.+.
T Consensus 210 v~~~~~fl~~~~~~--------t~~~~~~hi~~i~~~~G~dhVgiGsDf~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~ 281 (325)
T 2i5g_A 210 VTMFAPFLKKGIDS--------TIDDYAEAIEYVMNIVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFGKIVNP 281 (325)
T ss_dssp ECCCGGGSSSGGGC--------BHHHHHHHHHHHHHHHCTTSEEECCCBCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCC
T ss_pred EeecchhcCCCCCC--------CHHHHHHHHHHHHHhcCCceEEECCcCcccccccchhhhcccccccccccccCCCCCc
Confidence 54 3333211000 00011222333333 466 799999984211
Q ss_pred -----CCHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcc
Q 008063 487 -----INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 532 (579)
Q Consensus 487 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lg 532 (579)
...+..+...+ .+.|+|.+++=..+-.|..+.+.
T Consensus 282 ~gl~~~~~~~~l~~~L------------~~~G~se~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 282 LGIRTVGEFPNLTETL------------LKRGMPERVVRKVMGENWVRVLR 320 (325)
T ss_dssp BTCSSGGGTHHHHHHH------------HHTTCCHHHHHHHHTHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHH------------HHcCCCHHHHHHHHHHHHHHHHH
Confidence 11222222222 23468999988888888888775
No 112
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=77.71 E-value=7.8 Score=37.92 Aligned_cols=54 Identities=19% Similarity=0.097 Sum_probs=35.6
Q ss_pred HHHHHH-CCC-eeeecCCCCCCCC--CHHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 466 FQSLLA-NNA-LLALGSDWPVADI--NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 466 l~~l~~-~Gi-~v~~gsD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
++.+.+ .|. ++++|||+|.... .+.. .+.. -.+++.++.-+....|++++++++
T Consensus 274 l~~~i~~~g~drilfGSD~P~~~~~~~~~~----~l~~-----------~~~l~~~~~~~i~~~NA~rl~~l~ 331 (336)
T 2wm1_A 274 LKLLTDVIGKDKVILGTDYPFPLGELEPGK----LIES-----------MEEFDEETKNKLKAGNALAFLGLE 331 (336)
T ss_dssp HHHHHHHHCTTSEECCCCBTSTTSCSSTTH----HHHT-----------CTTSCHHHHHHHHTHHHHHHHTCC
T ss_pred HHHHHHHhCCccEEEeCCCCCCcCCcCHHH----HHHh-----------ccCCCHHHHHHHHHHHHHHHhCcC
Confidence 344433 354 7999999987532 2211 1111 135899998899999999999985
No 113
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=70.63 E-value=8.2 Score=38.42 Aligned_cols=137 Identities=7% Similarity=0.033 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeecc---------CCChhhHHHHhhCCcEEE
Q 008063 367 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVAS 437 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~---------~~~~~~~~~~~~~~i~~~ 437 (579)
.=+++++...+.|+.+.+-..++.+...+++.. ..+..++|.. .++++.++.+++.|..+-
T Consensus 179 ~G~~vV~emnrlGmivDlSH~s~~~~~dvl~~s----------~~PviaSHSn~ral~~h~RNl~De~l~~la~~GGvig 248 (369)
T 1itu_A 179 FGQRVVKELNRLGVLIDLAHVSVATMKATLQLS----------RAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVM 248 (369)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHC----------SSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEEE
T ss_pred hHHHHHHHHHHcCCEEEcCCCCHHHHHHHHHhc----------CCCEEEeCCChhhcCCCCCCCCHHHHHHHHHcCCeEE
Confidence 457788888999999987555666655555432 1244566654 567899999999887665
Q ss_pred ecc--cccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCC--------CCCHHHHHHHHHcccCCCCC
Q 008063 438 MQP--QHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVA--------DINPLCAIRTAMKRIPPGWD 505 (579)
Q Consensus 438 ~~p--~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~--------~~~~~~~~~~~~~~~~~~~~ 505 (579)
++- .+..... ..........+..+.+ .|+ .|++|||.... +...+..+...+.
T Consensus 249 v~~~~~fl~~~~--------~~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~L~------- 313 (369)
T 1itu_A 249 VNFYNNYISCTN--------KANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELL------- 313 (369)
T ss_dssp ECCCHHHHTSSS--------CCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHH-------
T ss_pred EEechhhcCCCC--------CCCHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH-------
Confidence 543 2221000 0000011222333333 376 69999996321 1344555555543
Q ss_pred CCCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 506 NAWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 506 ~~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
+.|+|.+++=..+-.|..+.+..
T Consensus 314 -----~~G~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 314 -----RRNWTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp -----HTTCCHHHHHHHHTHHHHHHHHH
T ss_pred -----HcCCCHHHHHHHHhHhHHHHHHH
Confidence 24589999999999999998865
No 114
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=70.23 E-value=15 Score=36.60 Aligned_cols=143 Identities=10% Similarity=-0.038 Sum_probs=71.1
Q ss_pred HHHHHHHHHHCCCeEEEEecc-hHHH---HHHHHHHHHHHH--hcCCCCCCceEeeccCCChhhHHHHhh--CCcEEEec
Q 008063 368 LLSMTMASDKSGLQVAIHAIG-DRAN---DLVLDMYKSVVV--TTGKRDQRFRIEHAQHLASGTAARFGD--QGIVASMQ 439 (579)
Q Consensus 368 l~~~~~~a~~~g~~i~iH~~g-~~~~---~~~~~~~~~~~~--~~~~~~~~~~i~H~~~~~~~~~~~~~~--~~i~~~~~ 439 (579)
+..+++.+.++|+++.+|... +... ......+..... .++ +.+..+.|+.. ...++..+.+ .++.+...
T Consensus 211 l~~~~e~a~e~glpv~iH~g~~d~~~~~~~~~p~~l~~ll~~~~~P--~lkiVl~Hg~~-~~~~~~~l~~~~~nvy~d~s 287 (376)
T 2qpx_A 211 LYHVAPFIIAQDMPLQFHVGYGDADTDMYLGNPLLMRDYLKAFTKK--GLKVVLLHCYP-YHREAGYLASVFPNLYFDIS 287 (376)
T ss_dssp HHHHHHHHHHHTCCEEEEESCCCTTSCGGGCCGGGGHHHHHHHGGG--TCCEEEEECTT-CHHHHHHHHHHSTTEEEECT
T ss_pred HHHHHHHHHHCCCeEEEEeCCCCCCCCccccCHHHHHHHHhcCCCC--CCcEEEECCCc-cHHHHHHHHHhCCCEEEecc
Confidence 334559999999999999963 1000 000001112222 333 45678999433 3333555544 45555544
Q ss_pred ccccccchhHHHHhhChhhhhhhhhhHHHHHHC-CC-eeeecCCCCCCCCC--H-HHHHHHHHcccCCCCCCCCCCCCCC
Q 008063 440 PQHLLDDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADIN--P-LCAIRTAMKRIPPGWDNAWIPSERI 514 (579)
Q Consensus 440 p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~-Gi-~v~~gsD~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l 514 (579)
. .. +..+. .....++.+.+. |. ++.+|||++..+.. + ....+..+.... ...++
T Consensus 288 ~-~~---------~~~~~---~~~~~l~~l~~~~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~--------~~~~l 346 (376)
T 2qpx_A 288 L-LD---------NLGPS---GASRVFNEAVELAPYTRILFASDASTYPEMYGLAARQFKQALVAHF--------NQLPF 346 (376)
T ss_dssp T-HH---------HHSGG---GHHHHHHHHTSSSCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHH--------HTCSS
T ss_pred c-cc---------ccChh---hHHHHHHHHHHhcCCCCEEEECCCCccchhhcccHHHHHHHHHHHH--------cccCc
Confidence 3 11 11110 011234555554 32 78999999865300 0 001112221110 00236
Q ss_pred CHHH-----HHHHHcHHHHHhcccC
Q 008063 515 SLTD-----ALIAHTLSAARACFLE 534 (579)
Q Consensus 515 s~~~-----al~~~T~npA~~lgl~ 534 (579)
+.++ .-+....|+++++|++
T Consensus 347 s~~~~~~~~~~~I~~~NA~rlf~l~ 371 (376)
T 2qpx_A 347 VDLAQKKAWINAICWQTSAKLYHQE 371 (376)
T ss_dssp CCHHHHHHHHHHHHTHHHHHHTTCG
T ss_pred chhhcCHHHHHHHHHHhHHHHhCCC
Confidence 6555 6677889999999985
No 115
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=65.67 E-value=54 Score=30.40 Aligned_cols=50 Identities=16% Similarity=0.087 Sum_probs=29.4
Q ss_pred hHHHHhhCCcEEEecccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeeecCCCC
Q 008063 425 TAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 483 (579)
Q Consensus 425 ~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~gsD~~ 483 (579)
.++.+++.|+.+.++....... .+.. . ....-++.+.+.|+++++|||.-
T Consensus 177 ~l~~~~~~g~~iEvn~~~~~~~-------~~~~-~-~~~~~~~~~~~~g~~~~~gSDaH 226 (267)
T 2yxo_A 177 ALRAVAEAGLFLDVNTAGLRRP-------AKEV-Y-PAPALLRRARELGIGLVLGSDAH 226 (267)
T ss_dssp HHHHHHHHTCEEEEEGGGGGST-------TCSC-B-SCHHHHHHHHHHTCCEEEECCBS
T ss_pred HHHHHHHcCCEEEEEchHhcCC-------CCCC-C-CCHHHHHHHHHcCCCEEEecCCC
Confidence 3556667777777654433210 0100 0 12224677889999999999974
No 116
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=62.78 E-value=15 Score=37.18 Aligned_cols=65 Identities=12% Similarity=0.191 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeecc---------CCChhhHHHHhhCCcEEE
Q 008063 367 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVAS 437 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~---------~~~~~~~~~~~~~~i~~~ 437 (579)
.=+++++...+.|+.+++-..++.....+++.. ..+..++|.. .++++.++.+++.|..+-
T Consensus 210 ~G~~vV~eMnrlGmivDlSH~s~~t~~dvl~~s----------~~PvIaSHSnaral~~hpRNl~De~l~~la~~GGvig 279 (417)
T 2rag_A 210 LGLRWLAEANRLGIVIDVSHASDDVVDQSVALS----------KAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAIC 279 (417)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBCHHHHHHHHHHC----------SSCCEEEEEEETTTSCCTTEECHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHcCCEEECCCCCHHHHHHHHHhc----------CCCeEEecCchHhhCCCCCCCCHHHHHHHHHcCCEEE
Confidence 457788888999999987555666666555431 2256777775 467899999999987776
Q ss_pred eccc
Q 008063 438 MQPQ 441 (579)
Q Consensus 438 ~~p~ 441 (579)
++..
T Consensus 280 v~f~ 283 (417)
T 2rag_A 280 INSI 283 (417)
T ss_dssp ECSS
T ss_pred EEEE
Confidence 6644
No 117
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=54.47 E-value=31 Score=34.65 Aligned_cols=63 Identities=13% Similarity=0.185 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeec---------cCCChhhHHHHhhCCcEEE
Q 008063 367 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHA---------QHLASGTAARFGDQGIVAS 437 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~---------~~~~~~~~~~~~~~~i~~~ 437 (579)
.=+++++...+.|+.+.+-..++.....+++.. ..+..++|. -.++++.++.+++.|-.+-
T Consensus 172 fG~~vV~eMNrlGmiVDlSH~s~~t~~dvl~~S----------~~PvIaSHSnaral~~hpRNl~De~lkala~~GGVIg 241 (400)
T 3id7_A 172 FGREVVREMNREGMLVDLSHVAATTMRDALDTS----------TAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAM 241 (400)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHC----------SSCCEESSCCBTTTSCCTTSBCHHHHTTHHHHTCEEE
T ss_pred HHHHHHHHHHHcCCeEEcCCCCHHHHHHHHHhC----------CCCEEEecCCccccCCCCCCCCHHHHHHHHHcCCEEE
Confidence 347788888999999987555666666555542 124455555 4577899999999886665
Q ss_pred ec
Q 008063 438 MQ 439 (579)
Q Consensus 438 ~~ 439 (579)
++
T Consensus 242 vn 243 (400)
T 3id7_A 242 VT 243 (400)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 118
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=52.38 E-value=38 Score=34.24 Aligned_cols=63 Identities=13% Similarity=0.127 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeecc---------CCChhhHHHHhhCCcEEE
Q 008063 367 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVAS 437 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~---------~~~~~~~~~~~~~~i~~~ 437 (579)
.=+++++...+.|+.+.+-..++.....+++.. ..+..++|.. .++++.++.+++.|..+-
T Consensus 194 ~G~~vV~eMNrlGmiVDlSH~s~~t~~dvl~~s----------~~PVIaSHSnaral~~hpRNl~De~l~~la~~GGVIg 263 (417)
T 3b40_A 194 LGKQAVERLNDLGVIIDVSQMSTKALEQVAALS----------RAPIVASHSAPRALVDIKRNLSDHEMQLIKDSGGVIQ 263 (417)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHC----------SSCEEEEEECBTTTSCCTTSBCHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHcCCEEECCCCCHHHHHHHHHhc----------CCCEEEeCCchhhcCCCCCCCCHHHHHHHHHcCCEEE
Confidence 457788888999999987655666666555431 2255677765 567999999999987665
Q ss_pred ec
Q 008063 438 MQ 439 (579)
Q Consensus 438 ~~ 439 (579)
++
T Consensus 264 v~ 265 (417)
T 3b40_A 264 VV 265 (417)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 119
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=52.07 E-value=26 Score=34.61 Aligned_cols=141 Identities=13% Similarity=0.086 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeec---------cCCChhhHHHHhhCCcEEE
Q 008063 367 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHA---------QHLASGTAARFGDQGIVAS 437 (579)
Q Consensus 367 ~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~---------~~~~~~~~~~~~~~~i~~~ 437 (579)
.=+++++...+.|+-+.+-..++.....+++.. ..+..++|. -.++++.++.+++.|-.+-
T Consensus 193 ~G~~vV~emnrlGmivDlSH~s~~t~~dvl~~s----------~~PviaSHSnaral~~h~RNl~De~l~ala~~GGvig 262 (364)
T 3ly0_A 193 AGRRLVAECNRLKIMLDLSHLNEKGFDDVARLS----------DAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVG 262 (364)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBCHHHHHHHHHHC----------SSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHHHHHHHHhc----------CCCeEEeCCchhhcCCCCCCCCHHHHHHHHHcCcEEE
Confidence 347788888999999976555555555555432 123344444 4678899999999987666
Q ss_pred eccc--ccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCC-------CCHHHHHHHHHcccCCCCCC
Q 008063 438 MQPQ--HLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVAD-------INPLCAIRTAMKRIPPGWDN 506 (579)
Q Consensus 438 ~~p~--~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~-------~~~~~~~~~~~~~~~~~~~~ 506 (579)
++-. +...... .-+..........+..+.+ .|+ .|++|||..... ...+..+..++.+
T Consensus 263 v~f~~~fl~~~~~----~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~gl~d~s~~p~L~~~L~~------- 331 (364)
T 3ly0_A 263 LNFATSFLREDGR----RSAEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQGIADVTGLPALQAAMRA------- 331 (364)
T ss_dssp ECCCHHHHSTTCC----CCSCCCSHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTTTCSGGGHHHHHHHHHH-------
T ss_pred EeccHhhhcCCCC----CCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH-------
Confidence 5432 2211000 0000000022222333333 477 799999954221 2334455555432
Q ss_pred CCCCCCCCCHHHHHHHHcHHHHHhccc
Q 008063 507 AWIPSERISLTDALIAHTLSAARACFL 533 (579)
Q Consensus 507 ~~~~~~~ls~~~al~~~T~npA~~lgl 533 (579)
.|.|.+++-..+-.|.-+.+..
T Consensus 332 -----rG~se~~i~ki~g~N~lRvl~~ 353 (364)
T 3ly0_A 332 -----HGYDEPLMRKLCHENWYGLLER 353 (364)
T ss_dssp -----HTCCHHHHHHHHTHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHhHhHHHHHHH
Confidence 3589999999999898888764
No 120
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=43.13 E-value=65 Score=31.14 Aligned_cols=135 Identities=8% Similarity=0.032 Sum_probs=81.4
Q ss_pred HHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeec---------cCCChhhHHHHhhCCcEEEe
Q 008063 368 LLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHA---------QHLASGTAARFGDQGIVASM 438 (579)
Q Consensus 368 l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~---------~~~~~~~~~~~~~~~i~~~~ 438 (579)
=+++++...+.|+.+++-..++.....+++.. ..+ ..+|. -.++++.++.+++.|-.+-+
T Consensus 156 G~~vV~eMnrlGmivDlSH~s~~t~~dvl~~s----------~~P-iaSHSnaral~~h~RNl~D~~l~ala~~GGvigv 224 (318)
T 3neh_A 156 GKDIIHLLNERKVFTDVSHLSVKAFWETLEQA----------EFV-IASHSNAKAICSHPRNLDDEQIKAMIEHDAMIHV 224 (318)
T ss_dssp HHHHHHHHHHHTCEEECTTBCHHHHHHHHHHC----------SSE-EESSCCBTTTSCCTTSBCHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHcCCeEEcCCCCHHHHHHHHHhc----------CCC-cccccchhhcCCCCCCCCHHHHHHHHHcCCEEEE
Confidence 36778888999999987555666665555442 113 55554 35678999999999876655
Q ss_pred c--ccccccchhHHHHhhChhhhhhhhhhHHHHHH-CCC-eeeecCCCCCCC--------CCHHHHHHHHHcccCCCCCC
Q 008063 439 Q--PQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNA-LLALGSDWPVAD--------INPLCAIRTAMKRIPPGWDN 506 (579)
Q Consensus 439 ~--p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~-~Gi-~v~~gsD~~~~~--------~~~~~~~~~~~~~~~~~~~~ 506 (579)
+ |.+..... ..........+..+.+ .|+ .|++|||.-... ...+..+..++.
T Consensus 225 ~~~~~fl~~~~--------~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~gl~d~s~~p~L~~~L~-------- 288 (318)
T 3neh_A 225 VFYPLFTTNNG--------VADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGKYQSFLETLE-------- 288 (318)
T ss_dssp CCCHHHHCTTS--------CCBHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBTBSSGGGHHHHHHHHT--------
T ss_pred EeeHHhhCCCC--------CCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH--------
Confidence 4 33221100 0000122333444444 365 699999964321 234555555553
Q ss_pred CCCCCCCCCHHHHHHHHcHHHHHhcccC
Q 008063 507 AWIPSERISLTDALIAHTLSAARACFLE 534 (579)
Q Consensus 507 ~~~~~~~ls~~~al~~~T~npA~~lgl~ 534 (579)
+ |.|.+++=..+-.|--+.+.-+
T Consensus 289 ----~-g~se~~i~ki~g~N~lRv~~~~ 311 (318)
T 3neh_A 289 ----K-HYTKEEIEGFASRNFLNHLPKE 311 (318)
T ss_dssp ----T-TSCHHHHHHHHTHHHHHTCCC-
T ss_pred ----h-cCCHHHHHHHHhHhHHHHHhhh
Confidence 3 5899998888888887777644
No 121
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=37.21 E-value=13 Score=37.91 Aligned_cols=61 Identities=31% Similarity=0.571 Sum_probs=52.4
Q ss_pred ccEEEEcCeEEeCCCCCCeeeEEEEECCEEEEecChHHHHhhccCCCeEEeCCCCeeeccccccccccc
Q 008063 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (579)
Q Consensus 45 ~~~likn~~v~~~~~~~~~~~~v~I~~GkI~~Ig~~~~~~~~~~~~~~viD~~g~~V~PG~ID~H~H~~ 113 (579)
++++|+|++|+++++. ..++|+|+||||++|++..+ ++.++||++|++|+|||||+|+|+.
T Consensus 1 ~~~li~n~~v~~~~~~--~~~~v~I~~g~I~~ig~~~~------~~~~viD~~G~~v~PGlID~H~H~~ 61 (457)
T 1nfg_A 1 MDIIIKNGTIVTADGI--SRADLGIKDGKITQIGGALG------PAERTIDAAGRYVFPGGIDVHTHVE 61 (457)
T ss_dssp CCEEEEEEEEEETTEE--EEEEEEEETTEEEEESSCCC------CCSEEEECTTCEEEECEEEEEECCS
T ss_pred CcEEEEeeEEEeCCCc--eeeeEEEECCEEEEecCCCC------CCCeEEeCCCCEEccceEeeccccc
Confidence 3689999999998653 57799999999999987421 3468999999999999999999986
No 122
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=24.67 E-value=2.3e+02 Score=25.89 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccc
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 442 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~ 442 (579)
.+++....+.+.+.+.|++..-=........ +.+++.....+ ...+.+.+.++.++++...+.|..+.+.|..
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~---e~I~~l~~~~~----~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~~ 115 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRSDAAV---EAIRLLRQAQP----EMLIGAGTILNGEQALAAKEAGATFVVSPGF 115 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTTHH---HHHHHHHHHCT----TCEEEEECCCSHHHHHHHHHHTCSEEECSSC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCCCHH---HHHHHHHHhCC----CCEEeECCcCCHHHHHHHHHcCCCEEEeCCC
Confidence 3567888999999999999653222222222 33333333332 3577788889999999999999999999986
Q ss_pred cc
Q 008063 443 LL 444 (579)
Q Consensus 443 ~~ 444 (579)
..
T Consensus 116 ~~ 117 (232)
T 4e38_A 116 NP 117 (232)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 123
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=22.78 E-value=2e+02 Score=28.17 Aligned_cols=70 Identities=10% Similarity=0.160 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEecccc
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 442 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~~p~~ 442 (579)
.+.+.++.+.+.+++.|+++..-.....+++.. ++. + -..+-|.-....+-..++.+++.|..+.+....
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l----~~~----~--v~~~KI~S~~~~N~pLL~~va~~gKPviLstGm 144 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLI----EAH----G--IEIIKIASCSFTDWPLLERIARSDKPVVASTAG 144 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH----HHT----T--CCEEEECSSSTTCHHHHHHHHTSCSCEEEECTT
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHH----HHc----C--CCEEEECcccccCHHHHHHHHhhCCcEEEECCC
Confidence 678999999999999999999887765544433 221 1 012233334455667888888888766665443
No 124
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=22.46 E-value=5e+02 Score=24.63 Aligned_cols=109 Identities=11% Similarity=0.056 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecch-HHH--HHHHHHHHHHHHhcCCCCCCceEeeccCCChhhHHHHhhCCcEEEe-
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGD-RAN--DLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASM- 438 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~-~~~--~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~i~~~~- 438 (579)
.+.+++.+.++.+.+.|+.-..=..|. ... +.+.+.++.+... +.... .....++++.++++++.|+....
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~----~~~i~-~s~g~l~~e~l~~L~~ag~~~v~i 158 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM----GVAVT-LSLGEWPREYYEKWKEAGADRYLL 158 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT----SCEEE-EECCCCCHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc----CceEE-EecCCCCHHHHHHHHHhCCCEEee
Confidence 688999888888888887643223343 322 4444444443322 22222 35566789999999998864332
Q ss_pred cccccccchhHHHHhhChhhhhhhhhhHHHHHHCCCeeee
Q 008063 439 QPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLAL 478 (579)
Q Consensus 439 ~p~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Gi~v~~ 478 (579)
...+ .+.+.+....+....++....++.+.+.|+.+..
T Consensus 159 ~let--~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~ 196 (348)
T 3iix_A 159 RHET--ANPVLHRKLRPDTSFENRLNCLLTLKELGYETGA 196 (348)
T ss_dssp CCBC--SCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eeee--CCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeecc
Confidence 2222 1223333333222333556678888999986544
No 125
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.96 E-value=2.8e+02 Score=25.68 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEEecchHHHHHHHHH
Q 008063 363 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDM 398 (579)
Q Consensus 363 ~~~~~l~~~~~~a~~~g~~i~iH~~g~~~~~~~~~~ 398 (579)
.+++.++++.+.|++.|+.+.+-++...+.++.++.
T Consensus 137 L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~ 172 (258)
T 4a29_A 137 LTERELESLLEYARSYGMEPLILINDENDLDIALRI 172 (258)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcC
Confidence 578899999999999999999888776666665553
No 126
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=20.74 E-value=5.9e+02 Score=24.80 Aligned_cols=45 Identities=22% Similarity=0.306 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCcCCCCCccccchHHHHHHHHHHhh
Q 008063 246 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASY 292 (579)
Q Consensus 246 ~~~~~~~~~~~~~~Git~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (579)
.+.++..++.+.+.|+.++.-.|+. |-.+.-+.++-.++.+...+
T Consensus 79 ~~al~~lv~~li~~Gv~Gl~v~GTT--GE~~~Ls~eEr~~vi~~~ve 123 (360)
T 4dpp_A 79 LEAYDDLVNIQIQNGAEGVIVGGTT--GEGQLMSWDEHIMLIGHTVN 123 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTT--TTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecccc--cChhhCCHHHHHHHHHHHHH
Confidence 3456677888899999999887753 44444455555566655444
Done!