Query 008066
Match_columns 579
No_of_seqs 197 out of 1814
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 17:18:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008066.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008066hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-97 3E-102 816.6 57.1 509 33-579 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 8.2E-96 3E-100 794.6 49.7 463 32-561 64-544 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 9.8E-92 3.3E-96 754.4 52.0 471 34-579 2-488 (499)
4 1v10_A Laccase; multicopper bl 100.0 3.8E-92 1.3E-96 766.0 49.3 472 32-579 20-508 (521)
5 1zpu_A Iron transport multicop 100.0 5.6E-92 1.9E-96 765.4 50.3 478 34-579 1-500 (534)
6 3t6v_A Laccase; beta barrel, o 100.0 1E-91 3.5E-96 754.4 49.6 470 35-579 4-488 (495)
7 2q9o_A Laccase-1; multicopper 100.0 2E-89 6.9E-94 750.0 48.4 482 32-579 30-540 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 6.6E-89 2.2E-93 738.2 45.2 466 36-579 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 1.5E-81 5.1E-86 670.4 39.8 404 32-559 13-438 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.5E-81 8.6E-86 669.4 34.4 408 34-564 17-444 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.7E-79 5.7E-84 666.1 41.0 422 34-563 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 8.7E-78 3E-82 652.6 41.5 429 35-561 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 1.6E-77 5.6E-82 639.7 41.0 417 31-561 46-481 (481)
14 3aw5_A Multicopper oxidase; be 100.0 3.9E-77 1.4E-81 635.9 32.3 397 35-560 20-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 5.2E-76 1.8E-80 656.6 38.5 464 33-564 30-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 2.1E-75 7.1E-80 623.0 35.3 431 33-559 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 5.4E-73 1.9E-77 619.2 43.7 447 33-563 30-593 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1.6E-53 5.6E-58 434.0 30.7 272 34-320 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 3.6E-52 1.2E-56 485.1 39.7 268 30-321 16-359 (1065)
20 2zwn_A Two-domain type laccase 100.0 5.2E-52 1.8E-56 427.6 33.7 273 34-321 2-280 (339)
21 2r7e_A Coagulation factor VIII 100.0 1.5E-54 5.2E-59 485.7 12.0 241 38-300 49-317 (742)
22 2dv6_A Nitrite reductase; elec 100.0 1.4E-49 4.7E-54 426.4 25.0 399 31-564 24-436 (447)
23 3gdc_A Multicopper oxidase; be 100.0 2.1E-47 7.3E-52 384.3 29.9 239 32-299 31-275 (288)
24 1kbv_A ANIA, major outer membr 100.0 1.3E-47 4.3E-52 392.9 27.6 262 32-321 35-310 (327)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 5.9E-46 2E-50 432.8 21.1 399 52-563 616-1060(1065)
26 3kw8_A Laccase, putative coppe 100.0 1.1E-44 3.8E-49 362.2 25.0 239 31-319 3-266 (276)
27 3tas_A Small laccase, multi-co 100.0 1.6E-44 5.4E-49 367.4 24.5 242 29-320 7-273 (313)
28 2zoo_A Probable nitrite reduct 100.0 7E-44 2.4E-48 381.2 28.3 264 31-321 24-300 (442)
29 3t9w_A Small laccase, multi-co 100.0 3E-44 1E-48 362.5 23.6 242 30-320 24-289 (299)
30 1mzy_A Copper-containing nitri 100.0 4.5E-43 1.5E-47 360.8 28.0 270 30-321 27-321 (333)
31 1oe1_A Dissimilatory copper-co 100.0 2.7E-42 9.2E-47 355.6 24.3 269 32-321 29-321 (336)
32 2bw4_A Copper-containing nitri 100.0 2.3E-41 7.8E-46 349.3 26.9 270 31-321 34-327 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 4.7E-41 1.6E-45 345.4 23.7 238 32-320 45-308 (343)
34 1sdd_B Coagulation factor V; c 100.0 5.6E-40 1.9E-44 366.4 26.0 264 32-318 3-327 (647)
35 2dv6_A Nitrite reductase; elec 100.0 1.5E-38 5E-43 340.8 32.1 260 33-321 161-436 (447)
36 1sdd_A Coagulation factor V; c 100.0 2.6E-41 8.9E-46 342.9 9.7 217 55-299 50-287 (306)
37 2r7e_B Coagulation factor VIII 100.0 6.7E-40 2.3E-44 367.7 11.9 249 32-298 130-442 (770)
38 2r7e_A Coagulation factor VIII 100.0 7.5E-37 2.6E-41 342.6 5.5 217 62-299 448-698 (742)
39 3gdc_A Multicopper oxidase; be 100.0 2.6E-29 8.8E-34 252.5 17.0 234 198-561 54-288 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 2.3E-28 8E-33 251.0 17.6 216 219-562 77-307 (343)
41 3g5w_A Multicopper oxidase typ 100.0 4.9E-28 1.7E-32 246.2 15.4 246 199-561 23-276 (318)
42 3t9w_A Small laccase, multi-co 100.0 8.4E-28 2.9E-32 242.3 15.8 219 217-563 56-289 (299)
43 2zwn_A Two-domain type laccase 99.9 1.5E-27 5.2E-32 245.2 17.1 244 199-562 24-278 (339)
44 3kw8_A Laccase, putative coppe 99.9 1.8E-27 6.3E-32 237.5 16.9 218 218-563 35-267 (276)
45 3tas_A Small laccase, multi-co 99.9 4.3E-27 1.5E-31 239.0 19.4 219 217-563 40-273 (313)
46 1sdd_A Coagulation factor V; c 99.9 2.3E-25 7.7E-30 225.7 0.4 236 201-562 52-301 (306)
47 1sdd_B Coagulation factor V; c 99.9 1.8E-22 6.1E-27 225.1 18.3 245 218-561 68-327 (647)
48 1kbv_A ANIA, major outer membr 99.9 4.6E-21 1.6E-25 195.9 20.5 249 199-563 59-309 (327)
49 2bw4_A Copper-containing nitri 99.9 1.3E-20 4.4E-25 194.0 20.0 94 455-564 231-327 (340)
50 2r7e_B Coagulation factor VIII 99.8 8.7E-23 3E-27 229.2 0.4 88 455-560 368-455 (770)
51 1mzy_A Copper-containing nitri 99.8 5.5E-19 1.9E-23 181.2 21.7 94 455-563 225-320 (333)
52 1oe1_A Dissimilatory copper-co 99.8 5.1E-18 1.7E-22 174.3 20.9 94 455-564 225-321 (336)
53 2zoo_A Probable nitrite reduct 99.8 1.8E-18 6.3E-23 184.4 18.2 249 199-563 49-299 (442)
54 2xu9_A Laccase; oxidoreductase 99.8 1.1E-17 3.9E-22 177.7 22.0 218 51-299 174-427 (439)
55 2uxt_A Protein SUFI, SUFI; oxi 99.8 1.1E-17 3.7E-22 178.1 20.7 251 35-318 152-441 (451)
56 1hfu_A Laccase 1; oxidoreducta 99.7 2.2E-15 7.5E-20 162.7 25.6 259 37-299 143-457 (503)
57 1v10_A Laccase; multicopper bl 99.7 1.3E-15 4.4E-20 165.1 23.8 240 54-299 191-478 (521)
58 3zx1_A Oxidoreductase, putativ 99.7 1.4E-15 4.9E-20 162.0 23.1 229 53-299 210-468 (481)
59 3t6v_A Laccase; beta barrel, o 99.6 1.6E-14 5.5E-19 154.9 24.1 241 53-298 167-457 (495)
60 1zpu_A Iron transport multicop 99.6 4.3E-14 1.5E-18 153.4 26.0 226 54-299 167-468 (534)
61 3pxl_A Laccase; 4-copper prote 99.6 4.4E-14 1.5E-18 151.5 24.2 241 53-298 165-457 (499)
62 3od3_A Blue copper oxidase CUE 99.6 2E-14 6.9E-19 153.1 21.0 250 36-299 151-477 (488)
63 1aoz_A Ascorbate oxidase; oxid 99.6 3.7E-14 1.2E-18 155.0 22.7 214 67-299 205-512 (552)
64 2q9o_A Laccase-1; multicopper 99.6 1.8E-13 6.2E-18 149.4 26.3 243 54-299 195-508 (559)
65 3aw5_A Multicopper oxidase; be 99.6 2.3E-14 7.7E-19 152.3 17.2 212 52-299 167-436 (448)
66 2g23_A PHS, phenoxazinone synt 99.6 1.7E-13 5.8E-18 149.8 23.5 234 53-300 253-579 (612)
67 2wsd_A Spore coat protein A; o 99.6 7.1E-14 2.4E-18 151.3 19.6 232 53-317 229-509 (513)
68 3abg_A Bilirubin oxidase; clea 99.5 1.8E-13 6.3E-18 148.2 17.7 239 54-318 201-475 (534)
69 3cvb_A Plastocyanin; cupredoxi 99.5 6.7E-15 2.3E-19 124.2 5.0 89 62-154 15-105 (105)
70 3sqr_A Laccase; multicopper ox 99.4 3.4E-11 1.2E-15 130.8 24.6 240 54-298 225-530 (580)
71 1iby_A Nitrosocyanin; RED copp 99.4 1.6E-12 5.5E-17 110.9 11.0 104 37-154 3-112 (112)
72 3gyr_A PHS, phenoxazinone synt 99.3 4.1E-11 1.4E-15 133.0 21.4 235 53-300 253-579 (612)
73 2cal_A Rusticyanin; iron respi 99.3 4.3E-12 1.5E-16 114.2 10.5 98 51-153 47-154 (154)
74 1fwx_A Nitrous oxide reductase 99.2 2.7E-11 9.1E-16 130.6 11.1 96 50-156 497-594 (595)
75 2ov0_A Amicyanin; beta-sandwic 99.1 1.7E-10 5.7E-15 97.0 10.0 77 62-153 29-105 (105)
76 3cvb_A Plastocyanin; cupredoxi 99.1 1.4E-10 4.9E-15 97.4 8.1 86 455-561 19-105 (105)
77 2aan_A Auracyanin A; cupredoxi 99.1 1.1E-10 3.6E-15 103.6 6.5 95 455-560 35-139 (139)
78 2gim_A Plastocyanin; beta shee 98.9 2.5E-09 8.4E-14 90.0 8.4 83 66-154 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 1.3E-08 4.5E-13 90.0 11.4 90 63-153 32-139 (139)
80 3c75_A Amicyanin; copper prote 98.8 7.9E-09 2.7E-13 90.4 8.4 77 62-153 56-132 (132)
81 2gim_A Plastocyanin; beta shee 98.8 1.1E-08 3.7E-13 86.0 7.6 85 455-560 20-105 (106)
82 4hci_A Cupredoxin 1; structura 98.7 2.9E-08 9.9E-13 82.4 8.6 73 66-153 28-100 (100)
83 2plt_A Plastocyanin; electron 98.7 6.9E-08 2.4E-12 79.7 8.5 80 66-153 18-98 (98)
84 1qhq_A Protein (auracyanin); e 98.6 8.2E-08 2.8E-12 84.9 9.1 99 455-560 33-139 (140)
85 1qhq_A Protein (auracyanin); e 98.6 2.2E-07 7.7E-12 82.1 11.1 89 65-154 32-140 (140)
86 1pcs_A Plastocyanin; electron 98.6 2E-07 6.8E-12 76.9 8.8 79 455-560 19-98 (98)
87 1pcs_A Plastocyanin; electron 98.6 1.4E-07 4.8E-12 77.9 7.9 80 66-153 19-98 (98)
88 2plt_A Plastocyanin; electron 98.5 2.3E-07 8E-12 76.5 8.7 81 455-560 18-98 (98)
89 1bxv_A Plastocyanin; copper pr 98.5 2.2E-07 7.6E-12 75.4 8.2 73 66-153 19-91 (91)
90 1bxv_A Plastocyanin; copper pr 98.5 4E-07 1.4E-11 73.9 8.0 73 455-560 19-91 (91)
91 1b3i_A PETE protein, protein ( 98.4 5E-07 1.7E-11 74.3 7.8 77 66-153 19-97 (97)
92 1byp_A Protein (plastocyanin); 98.4 9.4E-07 3.2E-11 73.0 9.4 77 66-153 17-99 (99)
93 1kdj_A Plastocyanin; electron 98.4 5.1E-07 1.8E-11 75.0 7.7 82 66-153 17-102 (102)
94 3tu6_A Pseudoazurin (blue copp 98.4 4.5E-07 1.6E-11 78.2 7.4 76 66-156 23-98 (127)
95 1plc_A Plastocyanin; electron 98.4 1.1E-06 3.8E-11 72.5 9.4 77 66-153 17-99 (99)
96 1iby_A Nitrosocyanin; RED copp 98.4 9.9E-07 3.4E-11 74.7 9.2 75 455-561 38-112 (112)
97 3erx_A Pseudoazurin; copper pr 98.4 8.2E-07 2.8E-11 76.2 8.3 75 66-155 21-95 (123)
98 3ef4_A Pseudoazurin, blue copp 98.4 8E-07 2.7E-11 76.2 8.0 75 66-155 22-96 (124)
99 1b3i_A PETE protein, protein ( 98.4 5.4E-07 1.8E-11 74.1 6.7 79 455-560 19-97 (97)
100 4hci_A Cupredoxin 1; structura 98.3 2E-06 6.7E-11 71.2 8.9 73 455-560 28-100 (100)
101 1byp_A Protein (plastocyanin); 98.3 1.8E-06 6.2E-11 71.2 8.3 83 455-560 17-99 (99)
102 1cuo_A Protein (azurin ISO-2); 98.3 1.8E-06 6.2E-11 74.7 8.2 88 66-154 18-129 (129)
103 1id2_A Amicyanin; beta barrel, 98.3 4.5E-06 1.5E-10 69.8 9.9 73 66-153 34-106 (106)
104 3ay2_A Lipid modified azurin p 98.1 4.5E-06 1.5E-10 75.2 7.9 93 62-154 54-167 (167)
105 1kdj_A Plastocyanin; electron 98.1 2.8E-06 9.7E-11 70.4 6.0 85 455-560 17-102 (102)
106 1iuz_A Plastocyanin; electron 98.1 7.9E-06 2.7E-10 67.2 8.5 77 66-153 18-98 (98)
107 1paz_A Pseudoazurin precursor; 98.1 9.5E-06 3.2E-10 69.6 8.2 75 66-155 21-95 (123)
108 3sbq_A Nitrous-oxide reductase 98.1 1.5E-05 5.2E-10 84.1 11.0 86 56-155 548-638 (638)
109 2ccw_A Azurin II, AZN-2; elect 98.1 2.1E-05 7.1E-10 68.0 10.0 86 66-153 18-128 (129)
110 1pmy_A Pseudoazurin; electron 98.1 8.3E-06 2.8E-10 70.0 7.5 75 66-155 21-95 (123)
111 1nwp_A Azurin; electron transp 98.0 2.9E-05 9.8E-10 66.9 10.2 87 66-153 18-128 (128)
112 1plc_A Plastocyanin; electron 98.0 7E-06 2.4E-10 67.6 5.9 83 455-560 17-99 (99)
113 2iaa_C Azurin; quinoprotein, t 98.0 4E-05 1.4E-09 66.0 10.5 87 66-153 17-127 (128)
114 2ux6_A Pseudoazurin; type-1 co 98.0 2.2E-05 7.5E-10 67.2 8.4 73 66-155 21-93 (122)
115 2cal_A Rusticyanin; iron respi 97.9 4.1E-05 1.4E-09 68.4 10.2 85 455-560 61-154 (154)
116 2ov0_A Amicyanin; beta-sandwic 97.9 3E-05 1E-09 64.5 8.1 73 455-560 33-105 (105)
117 1fwx_A Nitrous oxide reductase 97.9 4.4E-05 1.5E-09 82.4 10.7 78 454-561 512-592 (595)
118 3s8f_B Cytochrome C oxidase su 97.6 0.00083 2.8E-08 60.4 12.2 74 66-154 93-168 (168)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00034 1.2E-08 60.1 6.2 76 455-563 23-98 (127)
120 3erx_A Pseudoazurin; copper pr 97.3 0.00063 2.1E-08 58.1 7.8 75 455-562 21-95 (123)
121 3ef4_A Pseudoazurin, blue copp 97.3 0.00049 1.7E-08 58.7 6.9 76 455-563 22-97 (124)
122 3fsa_A Azurin; copper, cupredo 97.2 0.002 6.9E-08 54.6 10.2 87 63-153 15-125 (125)
123 1iuz_A Plastocyanin; electron 97.1 0.0016 5.6E-08 53.1 8.3 81 455-560 18-98 (98)
124 1id2_A Amicyanin; beta barrel, 97.1 0.0016 5.6E-08 54.0 8.1 73 455-560 34-106 (106)
125 3c75_A Amicyanin; copper prote 97.0 0.0022 7.7E-08 55.4 8.1 73 455-560 60-132 (132)
126 2cua_A Protein (CUA); CUA cent 96.7 0.0087 3E-07 51.8 9.5 74 66-154 60-135 (135)
127 1paz_A Pseudoazurin precursor; 96.5 0.0064 2.2E-07 51.8 7.5 75 455-562 21-95 (123)
128 1pmy_A Pseudoazurin; electron 96.5 0.0052 1.8E-07 52.3 6.7 75 455-562 21-95 (123)
129 3sbq_A Nitrous-oxide reductase 96.1 0.022 7.5E-07 60.4 10.3 79 455-561 558-637 (638)
130 2ux6_A Pseudoazurin; type-1 co 95.6 0.025 8.5E-07 48.0 6.9 73 455-562 21-93 (122)
131 2cua_A Protein (CUA); CUA cent 95.6 0.051 1.7E-06 46.9 8.8 71 456-560 61-134 (135)
132 3ay2_A Lipid modified azurin p 95.5 0.031 1E-06 50.1 7.3 91 455-560 58-166 (167)
133 1cuo_A Protein (azurin ISO-2); 94.9 0.098 3.4E-06 44.7 8.4 91 455-560 18-128 (129)
134 2iaa_C Azurin; quinoprotein, t 94.1 0.15 5.3E-06 43.4 7.8 44 516-560 81-127 (128)
135 2ccw_A Azurin II, AZN-2; elect 94.0 0.2 6.9E-06 42.8 8.4 43 517-560 83-128 (129)
136 1nwp_A Azurin; electron transp 93.2 0.28 9.5E-06 41.8 7.9 97 455-559 18-127 (128)
137 3s8f_B Cytochrome C oxidase su 91.9 0.64 2.2E-05 41.5 8.8 74 456-561 94-168 (168)
138 3fsa_A Azurin; copper, cupredo 91.6 0.63 2.2E-05 39.2 7.8 96 455-559 18-124 (125)
139 3isy_A Bsupi, intracellular pr 86.1 8.9 0.0003 31.9 11.0 69 229-298 22-103 (120)
140 3isy_A Bsupi, intracellular pr 76.5 31 0.0011 28.5 11.1 74 55-139 23-101 (120)
141 1cyx_A CYOA; electron transpor 72.0 12 0.00042 34.1 8.0 61 220-299 42-102 (205)
142 1cyx_A CYOA; electron transpor 65.9 17 0.00059 33.2 7.6 76 66-156 41-119 (205)
143 1yew_A Particulate methane mon 57.6 35 0.0012 33.8 8.4 16 111-126 319-334 (382)
144 2gsm_B Cytochrome C oxidase su 51.7 32 0.0011 32.8 7.1 61 220-299 172-232 (262)
145 3hb3_B Cytochrome C oxidase su 51.6 33 0.0011 33.3 7.3 62 219-299 189-250 (298)
146 2gsm_B Cytochrome C oxidase su 49.7 47 0.0016 31.6 8.0 76 66-156 171-248 (262)
147 3hb3_B Cytochrome C oxidase su 46.0 58 0.002 31.6 8.1 76 66-156 189-266 (298)
148 2f1e_A Protein APAG; APAG prot 44.2 21 0.00072 29.9 4.0 47 77-124 34-86 (127)
149 3rfr_A PMOB; membrane, oxidore 44.1 38 0.0013 33.9 6.3 111 10-128 229-368 (419)
150 1nep_A EPV20, BNPC2, epididyma 42.8 40 0.0014 28.2 5.7 69 57-126 18-94 (130)
151 2xzz_A Protein-glutamine gamma 42.2 40 0.0014 27.0 5.2 52 74-133 22-79 (102)
152 1xvs_A Protein APAG; MCSG APC2 41.6 21 0.0007 29.9 3.5 47 77-124 33-85 (126)
153 4ubp_B Protein (urease (chain 41.4 52 0.0018 27.2 5.7 58 67-124 18-87 (126)
154 4ac7_B Urease subunit beta; hy 41.4 52 0.0018 27.2 5.7 58 67-124 18-87 (126)
155 1xwv_A DER F II; beta sheets, 39.1 52 0.0018 27.4 5.8 69 57-126 16-92 (129)
156 1xq4_A Protein APAG; all beta 36.9 29 0.00099 29.6 3.8 48 77-125 38-91 (139)
157 1v54_B Cytochrome C oxidase po 35.4 75 0.0025 29.5 6.7 62 219-299 140-201 (227)
158 2r39_A FIXG-related protein; s 35.4 75 0.0026 25.9 6.1 46 228-283 34-81 (118)
159 1tza_A APAG protein, SOR45; st 34.0 27 0.00091 29.6 3.1 44 77-123 33-84 (134)
160 1fft_B Ubiquinol oxidase; elec 33.9 51 0.0017 32.3 5.5 61 220-299 152-212 (315)
161 2p9r_A Alpha-2-M, alpha-2-macr 29.2 1.8E+02 0.0062 22.5 7.4 69 222-296 12-84 (102)
162 3kmh_A D-lyxose isomerase; cup 22.9 96 0.0033 28.8 4.9 50 66-122 129-184 (246)
163 2c34_A ICP, inhibitor of cyste 22.3 3.1E+02 0.011 22.1 7.7 25 65-89 14-38 (116)
164 4ep8_B Urease subunit beta; al 21.4 2E+02 0.007 22.7 5.8 58 67-124 12-81 (101)
165 1v54_B Cytochrome C oxidase po 20.9 1.6E+02 0.0054 27.2 6.1 76 454-561 139-215 (227)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1e-97 Score=816.56 Aligned_cols=509 Identities=30% Similarity=0.574 Sum_probs=404.5
Q ss_pred CceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCCcccc
Q 008066 33 AKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPEFVTQ 111 (579)
Q Consensus 33 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~~~~~ 111 (579)
+++|+|+|+|++..+++||..+++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHhhh
Q 008066 112 CPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATR 190 (579)
Q Consensus 112 ~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 190 (579)
|+|+||++|+|+|++ +++||||||||...++. ||+|+|||+++++...+++ .|+|++|+++||++....+.......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 89999999999988886 9999999999875544543 46899999999999887766544332
Q ss_pred CC-CCCCCCceEEEcCCCCCCCCC-------------CCC-----CeeeEEEecCCEEEEEEeecCCCccEEEEEcCCee
Q 008066 191 TG-AAPNISDAYTINGQPGDLYNC-------------SSQ-----DTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQF 251 (579)
Q Consensus 191 ~g-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~ 251 (579)
.. .....++.++|||+.. ++| +.. ..+.+++++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 21 1112467999999984 333 221 12379999999999999999999999999999999
Q ss_pred EEEeeCCcccCceEEeEEEECcccEEEEEEEc-CCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCC
Q 008066 252 TVVGADASYLKPFTTSVIMLGPGQTTDVLIKG-DQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIR 330 (579)
Q Consensus 252 ~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~-~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~ 330 (579)
+|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|+++... +. .+.....++|+|.+..... .+.
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~---~~~~~~~ail~y~~~~~~~----~p~ 308 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH---PNTPPGLTLLNYLPNSVSK----LPT 308 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC---CCSCCEEEEEEETTSCTTS----CCS
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC---CCCccEEEEEEECCCCCCC----CCC
Confidence 99999999999999999999999999999999 446799999999764 21 1345688999998765311 111
Q ss_pred CCCCCCCCCCCccchhhcccCcCCCC---CCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeec
Q 008066 331 PVMPPLPAFNDTATVTAFTKKLRSPQ---KVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVL 407 (579)
Q Consensus 331 ~~~p~~p~~~~~~~~~~~~~~~~~l~---p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~ 407 (579)
+..|..+.+++......+. ++.+. +...+...++++.+....+.. . ..+.|++||++|..
T Consensus 309 ~~~p~~p~~~~~~~~~~~~--l~~l~~~~~~~~~~~~~~~~~l~~~~~~~--------------~-~~~~w~iNg~s~~~ 371 (552)
T 1aoz_A 309 SPPPQTPAWDDFDRSKNFT--YRITAAMGSPKPPVKFNRRIFLLNTQNVI--------------N-GYVKWAINDVSLAL 371 (552)
T ss_dssp SCCCCCCCTTCHHHHHHHH--TTCCBCTTCCCCCSSCSEEEEEEEEEEEE--------------T-TEEEEEETTEEECC
T ss_pred CCCCCCCcccccccccccc--ccccccCCCCCCCCCCcEEEEEEEeeccC--------------C-CeEEEEECCCccCC
Confidence 1223444445433222111 22222 333456778888877654321 1 25679999999998
Q ss_pred CCchhhhhhcccCCCCcccCCCCCCCCc-cccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCC---CCCCCee
Q 008066 408 PSNFSLLQAHHHGIPGVFTTDFPANPPF-KFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFT---PENHPIH 483 (579)
Q Consensus 408 p~~~~~l~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~---~~~HP~H 483 (579)
|.. ++|.+.+.+.++.|..+++..++. .|+... +..+...+.++.++.++.|++|||+|+|.+.+. ...||||
T Consensus 372 p~~-P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~H 448 (552)
T 1aoz_A 372 PPT-PYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT--PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWH 448 (552)
T ss_dssp CSS-CHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS--CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEE
T ss_pred CCC-CHHHHHhhcCccccccCCCcccccccccccc--ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEE
Confidence 877 666666555566666666543321 233321 111112345677899999999999999976433 5679999
Q ss_pred eeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCc
Q 008066 484 IHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 484 lHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
||||+||||+++.|.|++ .+...+|+.+|.|||||.||++||++|||+|||||.|+|||||+||++.|||++|.|..
T Consensus 449 LHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-- 525 (552)
T 1aoz_A 449 LHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-- 525 (552)
T ss_dssp ETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG--
T ss_pred EcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc--
Confidence 999999999999999987 45567899999999999999999999999999999999999999999999999998643
Q ss_pred cccccCCCCCCCCCCC
Q 008066 564 TELEKLEAPPPDYPVC 579 (579)
Q Consensus 564 ~~~~~~~~~p~~~~~c 579 (579)
.+++.+|.++++|
T Consensus 526 ---~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 ---EKVGRIPTKALAC 538 (552)
T ss_dssp ---GGCCCCCHHHHSS
T ss_pred ---hhhccCCcchhhh
Confidence 3677789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=8.2e-96 Score=794.56 Aligned_cols=463 Identities=30% Similarity=0.508 Sum_probs=373.8
Q ss_pred cCceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCCccc
Q 008066 32 NAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
.+++++|+|++++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCCCCCCce-eEEeeeeccCChHHHHHHh
Q 008066 111 QCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFPKPKRET-PILLGEWWDANPIDVVRQA 188 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 188 (579)
||+|+||++|+|+|++ .++||||||||...++. ||+|+|||+++.+. .+|+|. +|+++||++....++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 79999999999998886 99999999988653 247787 9999999999988777665
Q ss_pred hhCCCCCCCCceEEEcCCCCCCCCCCC---------CCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCc
Q 008066 189 TRTGAAPNISDAYTINGQPGDLYNCSS---------QDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADAS 259 (579)
Q Consensus 189 ~~~g~~~~~~~~~liNG~~~~~~~~~~---------~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~ 259 (579)
...+ +..+++++|||+.. +.|+. ...+.+++++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~~--~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLGA--PPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTSC--CCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hccC--CCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 5432 45678999999964 55542 24578999999999999999999999999999999999999999
Q ss_pred ccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 008066 260 YLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAF 339 (579)
Q Consensus 260 ~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~ 339 (579)
+++|+.+++|.|++||||||+|++++.+|+|||++....+|. .........|||+|.++... . |..+.+
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~-~~~~~~~~~aiL~Y~~~~~~------~----P~~~~~ 362 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCS-TNNEAANATGILRYDSSSIA------N----PTSVGT 362 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTS-CBTTGGGCEEEEESSTTCCC------C----CCCCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccC-ccCCCCceEEEEEECCCCCC------C----CCCCCC
Confidence 999999999999999999999999988899999998876553 11233468999999865431 1 111112
Q ss_pred CCccchhhc-ccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeec-CCchhhhhhc
Q 008066 340 NDTATVTAF-TKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVL-PSNFSLLQAH 417 (579)
Q Consensus 340 ~~~~~~~~~-~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~~~~l~~~ 417 (579)
.....+... ...+.++.+..++...+.++.+.+. .+..+.|++||.+|.. +..|.+++.
T Consensus 363 ~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~------------------~~~~~~w~iN~~s~~~~~~~P~L~~~- 423 (580)
T 3sqr_A 363 TPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSA------------------FTNYFTWTINSSSLLLDWSSPTTLKI- 423 (580)
T ss_dssp CCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE------------------ESSSEEEEETTBCCCCCTTSCHHHHH-
T ss_pred CccchhhcccccccccCCCCCCCCccceEEEEEec------------------cCCceeEEECCEecccCCCCCchhhh-
Confidence 211111110 0233443344444444444444432 2235789999999975 466444443
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEee----cCcEEEEEEecCCCCCCCCCCeeeeccceEEEE
Q 008066 418 HHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLE----YGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIA 493 (579)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~ 493 (579)
+.+ ..+|+ ...+++.++ .|++|||+|+|.+. ....||||||||+||||+
T Consensus 424 ~~g-----~~~~~---------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~ 476 (580)
T 3sqr_A 424 FNN-----ETIFP---------------------TEYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVA 476 (580)
T ss_dssp HTT-----CCCCC---------------------GGGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEE
T ss_pred hcC-----CccCC---------------------CCcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEe
Confidence 221 01221 123445554 69999999999652 257999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEec
Q 008066 494 EGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 494 ~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
+|.|.|+++.+...+|+.||++||||.|+++||++|||++||||+|+|||||+||++.||+++|++..
T Consensus 477 ~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~ 544 (580)
T 3sqr_A 477 QETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ 544 (580)
T ss_dssp EESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG
T ss_pred cCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH
Confidence 99999998877788999999999999999999999999999999999999999999999999999754
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=9.8e-92 Score=754.41 Aligned_cols=471 Identities=26% Similarity=0.469 Sum_probs=364.9
Q ss_pred ceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-----CceEEeCCccccCCCCCCCCCc
Q 008066 34 KAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-----NVTIHWHGVRQMRTAWADGPEF 108 (579)
Q Consensus 34 ~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~siH~HG~~~~~~~~~DGv~~ 108 (579)
....|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++.+++|+||+++
T Consensus 2 ~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~ 81 (499)
T 3pxl_A 2 VGPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF 81 (499)
T ss_dssp BCSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT
T ss_pred ccceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc
Confidence 34679999999999999999999999999999999999999999999999985 7999999999999999999999
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeeccCChHHHHH
Q 008066 109 VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGS-SYPFPKPKRETPILLGEWWDANPIDVVR 186 (579)
Q Consensus 109 ~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 186 (579)
++||+|+||++|+|+|++++++||||||||...++. ||+|+|||+++.+. ..++...++|++|+++||++.....
T Consensus 82 vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~--- 158 (499)
T 3pxl_A 82 INQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL--- 158 (499)
T ss_dssp TTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT---
T ss_pred cccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc---
Confidence 999999999999999998789999999999988885 99999999987642 1123233567899999999876432
Q ss_pred HhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEE
Q 008066 187 QATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTT 266 (579)
Q Consensus 187 ~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~ 266 (579)
.+..+..+++++|||+.. ++.|.....+.+++++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.+
T Consensus 159 ----~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 233 (499)
T 3pxl_A 159 ----GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEV 233 (499)
T ss_dssp ----SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEE
T ss_pred ----ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEe
Confidence 233344679999999953 333444566899999999999999999999999999999999999999999999999
Q ss_pred eEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchh
Q 008066 267 SVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVT 346 (579)
Q Consensus 267 d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 346 (579)
++|.|++||||||+|++++.+|+|+|++.....+. .+......|||+|.+..... +.. +..+....
T Consensus 234 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~----p~~---~~~~~~~~----- 299 (499)
T 3pxl_A 234 DSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV--GFDGGINSAILRYDGAPAVE----PTT---NQTTSVKP----- 299 (499)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSC----CCC---CCCCCSSB-----
T ss_pred eeEEECCCcEEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEeCCCCCCC----CCC---CCCCCCcc-----
Confidence 99999999999999999987899999998754442 22333458999998754311 000 00010000
Q ss_pred hcccCcCCCCCCC-----CCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCC
Q 008066 347 AFTKKLRSPQKVE-----VPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGI 421 (579)
Q Consensus 347 ~~~~~~~~l~p~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~ 421 (579)
.....++++.+.. .+...|+++.+.+.+. + ..|++||++|..|+.|.|++.....
T Consensus 300 ~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~-----------------~--~~w~iNg~s~~~~~~P~L~~~~~g~- 359 (499)
T 3pxl_A 300 LNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFN-----------------G--SNFFINGASFVPPTVPVLLQILSGA- 359 (499)
T ss_dssp CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEC-----------------S--SCEEETTBCCCCCSSCHHHHHHTTC-
T ss_pred cccccccccccccCCCcccCCCCcEEEEEEEEec-----------------C--cEEEEcCEecCCCCCchhhhhhcCC-
Confidence 0112234433221 2234666666554321 1 1589999999988886566553211
Q ss_pred CCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCC
Q 008066 422 PGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNP 501 (579)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~ 501 (579)
+... .....+.++.++.|++|||+|+|.+......||||||||+|+|++.+.
T Consensus 360 ---~~~~--------------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g----- 411 (499)
T 3pxl_A 360 ---QTAQ--------------------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG----- 411 (499)
T ss_dssp ---CSTT--------------------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-----
T ss_pred ---cccc--------------------ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-----
Confidence 1000 011235688999999999999942213467999999999999998642
Q ss_pred CCCCCCCCCCCCCcceeEEeCC---CcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCcccccc-CCCCCCCCC
Q 008066 502 KTDTSKFNLVDPPLRNTVGVPV---GGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEK-LEAPPPDYP 577 (579)
Q Consensus 502 ~~~~~~~~~~~p~~rDTv~vp~---~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~-~~~~p~~~~ 577 (579)
...+|+.+|++||||.||+ ++|++|||+|||||.|+|||||+||++.||+++|++. ++...+ ...|+++..
T Consensus 412 ---~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~--~~~~~~~~~~p~~~~~ 486 (499)
T 3pxl_A 412 ---STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED--TPDVKAVNPVPQAWSD 486 (499)
T ss_dssp ---CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES--GGGHHHHSCCCHHHHT
T ss_pred ---CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC--hhHhccccCCCHHHHH
Confidence 2357889999999999997 9999999999999999999999999999999999743 322333 334555556
Q ss_pred CC
Q 008066 578 VC 579 (579)
Q Consensus 578 ~c 579 (579)
+|
T Consensus 487 ~C 488 (499)
T 3pxl_A 487 LC 488 (499)
T ss_dssp HH
T ss_pred hh
Confidence 66
No 4
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=3.8e-92 Score=766.05 Aligned_cols=472 Identities=26% Similarity=0.449 Sum_probs=362.5
Q ss_pred cCceEEEEEEEEEEeeecCce-eeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-----CCceEEeCCccccCCCCCCC
Q 008066 32 NAKAHHHDFVIQATPVKRLCK-THNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-----YNVTIHWHGVRQMRTAWADG 105 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~g~-~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~siH~HG~~~~~~~~~DG 105 (579)
.+.+.+|+|++++..+++||+ .+++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 456788999999999999999 999999999999999999999999999999999 99999999999998899999
Q ss_pred CCcccccccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeeccCChHH
Q 008066 106 PEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGS-SYPFPKPKRETPILLGEWWDANPID 183 (579)
Q Consensus 106 v~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~ 183 (579)
+++++||+|+||++|+|+|++++++||||||||.+.++. ||+|+|||+++.+. +.+++..++|++|+++||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 999999999999999999997789999999999998886 99999999987632 2223333479999999999987665
Q ss_pred HHHHhhhCCCCCCCCceEEEcCCCCCCCCCC--CCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCccc
Q 008066 184 VVRQATRTGAAPNISDAYTINGQPGDLYNCS--SQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYL 261 (579)
Q Consensus 184 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~ 261 (579)
+... .+.....+++++|||+.. +.|. ....+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 180 ~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 180 LFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp ---------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred Hhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 4321 112234578999999975 4564 23457899999999999999999999999999999999999999999
Q ss_pred CceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCC
Q 008066 262 KPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFND 341 (579)
Q Consensus 262 ~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~ 341 (579)
+|+.++++.|+|||||||+|++++.+|+|+|+++....+. .+......++|+|.+..... +... .......+
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~--~~~~~~~~ail~y~~~~~~~----p~~~-~~~~~~~~- 326 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN--GFTGGINSAIFRYQGAAVAE----PTTS-QNSGTALN- 326 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTCCSCC----CCCC-CCCSCBCC-
T ss_pred cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc--cCCCCceeEEEEECCCCCCC----CCCC-CCcccccc-
Confidence 9999999999999999999999977899999998754321 12222346999998765411 0000 00000011
Q ss_pred ccchhhcccCcCCCCCCCCC-----CCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhh
Q 008066 342 TATVTAFTKKLRSPQKVEVP-----TDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQA 416 (579)
Q Consensus 342 ~~~~~~~~~~~~~l~p~~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~ 416 (579)
...+.++.+...| ...+.++.+...+ ++..+.|++||++|..+..|.+++.
T Consensus 327 -------~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-----------------~~~~~~~~iNg~~~~~~~~P~l~~~ 382 (521)
T 1v10_A 327 -------EANLIPLINPGAPGNPVPGGADINLNLRIGR-----------------NATTADFTINGAPFIPPTVPVLLQI 382 (521)
T ss_dssp -------GGGCCBSSCCCCSSCSSTTCSSEEEECCEEC-----------------CSSSSCCEESSCCCCCCSSCHHHHH
T ss_pred -------hhhcccCCcccCCCcccCCcceEEEEEEEec-----------------CCceeEEEECCCcccCCCCchhhhh
Confidence 1123333221222 1334444333221 2223468999999998877444443
Q ss_pred cccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecC
Q 008066 417 HHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGF 496 (579)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~ 496 (579)
..... . .++ ...++.++.++.|++|||+++| .+.||||||||+|||++++.
T Consensus 383 ~~g~~-~--~~~---------------------~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~ 433 (521)
T 1v10_A 383 LSGVT-N--PND---------------------LLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPG 433 (521)
T ss_dssp HHTCC-C--GGG---------------------SSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTT
T ss_pred hcCCc-c--ccc---------------------CCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCC
Confidence 22110 0 001 1234678899999999999999 35999999999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCcceeEEe-CCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCccccccCCC-CCC
Q 008066 497 GNFNPKTDTSKFNLVDPPLRNTVGV-PVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEA-PPP 574 (579)
Q Consensus 497 g~~~~~~~~~~~~~~~p~~rDTv~v-p~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~~~~-~p~ 574 (579)
+. .+|+.+|.|||||.| |+++|++|||++||||.|+|||||+||++.|||++|+|.+... .++.. |+.
T Consensus 434 ~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~ 503 (521)
T 1v10_A 434 SS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPA 503 (521)
T ss_dssp CS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHH
T ss_pred CC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChH
Confidence 42 467889999999999 8999999999999999999999999999999999999865433 34443 445
Q ss_pred CCCCC
Q 008066 575 DYPVC 579 (579)
Q Consensus 575 ~~~~c 579 (579)
+.++|
T Consensus 504 ~~~~C 508 (521)
T 1v10_A 504 WDDLC 508 (521)
T ss_dssp HHTHH
T ss_pred Hhhhc
Confidence 67777
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-92 Score=765.45 Aligned_cols=478 Identities=26% Similarity=0.391 Sum_probs=373.8
Q ss_pred ceEEEEEEEEEEeeecCc-eeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCCcccc
Q 008066 34 KAHHHDFVIQATPVKRLC-KTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPEFVTQ 111 (579)
Q Consensus 34 ~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~~~~~ 111 (579)
++++|+|++++..+++|| ..+++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999999 99999999999999899999999999
Q ss_pred cccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHhhh
Q 008066 112 CPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATR 190 (579)
Q Consensus 112 ~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 190 (579)
|+|+||++|+|+|++.+++||||||||.+.++. ||+|+|||+++.+ + + .+|+|++|+++||++....++....+.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p--~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-P--Y-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-C--S-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-C--C-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 999999999999998669999999999998886 9999999999864 2 2 458999999999999988777665432
Q ss_pred C---CCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEe
Q 008066 191 T---GAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTS 267 (579)
Q Consensus 191 ~---g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d 267 (579)
. .+....++++||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12234678999999975 6899999999999999999999999999999999999999999999999
Q ss_pred EEEECcccEEEEEEEcCCC-CcceEEEEEeccCCCC--CCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCC-CCCcc
Q 008066 268 VIMLGPGQTTDVLIKGDQP-PSRYYLAARAYASAPN--APFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPA-FNDTA 343 (579)
Q Consensus 268 ~l~l~pG~R~dv~v~~~~~-~g~~~l~~~~~~~~~~--~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~-~~~~~ 343 (579)
+|.|++||||||+|++++. .++|+|++.....+.. .........++|+|.+.... +.++.....+. .++
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~~~-- 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFLDD-- 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSCCG--
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCccccccccccc--
Confidence 9999999999999999864 4789999886543210 11123457899999875431 11111111111 111
Q ss_pred chhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCC
Q 008066 344 TVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPG 423 (579)
Q Consensus 344 ~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~ 423 (579)
..++++.+...+...++++.+...+... .++ ...|.+||++|..+..|.+++.+.. +
T Consensus 300 ------~~l~p~~~~~~~~~~~~~~~l~~~~~~~-------------~~~-~~~~~iNg~s~~~~~~P~L~~~~~~---~ 356 (534)
T 1zpu_A 300 ------FYLQPYEKEAIYGEPDHVITVDVVMDNL-------------KNG-VNYAFFNNITYTAPKVPTLMTVLSS---G 356 (534)
T ss_dssp ------GGCCBSSCCCCCCSCSEEEEEEEEEEEC-------------TTS-CEEEEETTBCCCCCSSCHHHHHTTS---G
T ss_pred ------ccceeCCCCCCCCCCCeEEEEEEEeecc-------------CCc-eeEEEECCCcccCCCCCceeeeccc---C
Confidence 1233333333445677887777654310 022 2358899999998888666655321 1
Q ss_pred cccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCC------
Q 008066 424 VFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFG------ 497 (579)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g------ 497 (579)
.+.. . +. ....++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 357 ~~~~----~-~~-------------~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~ 415 (534)
T 1zpu_A 357 DQAN----N-SE-------------IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALG 415 (534)
T ss_dssp GGTT----C-GG-------------GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGT
T ss_pred cccC----C-Cc-------------ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCcccccc
Confidence 1100 0 00 1123467789999999999999964 679999999999999999864
Q ss_pred ----CCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCcccccc--CCC
Q 008066 498 ----NFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEK--LEA 571 (579)
Q Consensus 498 ----~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~--~~~ 571 (579)
.|++.. .. ....+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.+. ... ++.
T Consensus 416 G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~-~~~~~~~~ 492 (534)
T 1zpu_A 416 EVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGI-QDAHSQQL 492 (534)
T ss_dssp CCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHH-HHCGGGSC
T ss_pred CcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcccc-ccccccCC
Confidence 344321 11 224689999999999999999999999999999999999999999999999765332 222 555
Q ss_pred CCCCCCCC
Q 008066 572 PPPDYPVC 579 (579)
Q Consensus 572 ~p~~~~~c 579 (579)
|+...+.|
T Consensus 493 p~~~~~~C 500 (534)
T 1zpu_A 493 SENHLEVC 500 (534)
T ss_dssp CHHHHHHH
T ss_pred ChhHhhhh
Confidence 66555655
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1e-91 Score=754.38 Aligned_cols=470 Identities=25% Similarity=0.437 Sum_probs=362.5
Q ss_pred eEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-----CceEEeCCccccCCCCCCCCCcc
Q 008066 35 AHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-----NVTIHWHGVRQMRTAWADGPEFV 109 (579)
Q Consensus 35 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-----~~siH~HG~~~~~~~~~DGv~~~ 109 (579)
...|+|++++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++.+++|+||++++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4679999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeeccCChHHHHHH
Q 008066 110 TQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGS-SYPFPKPKRETPILLGEWWDANPIDVVRQ 187 (579)
Q Consensus 110 ~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 187 (579)
+||+|+||++|+|+|++++++||||||||...++. ||+|+|||+++++. ..++...++|++|+++||++......
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 99999999999999998789999999999988885 99999999987642 12232335678999999999875421
Q ss_pred hhhCCCCCCCCceEEEcCCCCCCCCCC-CCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEE
Q 008066 188 ATRTGAAPNISDAYTINGQPGDLYNCS-SQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTT 266 (579)
Q Consensus 188 ~~~~g~~~~~~~~~liNG~~~~~~~~~-~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~ 266 (579)
.+..+..+++++|||+.. +..|. ....+.+++++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 ---~~~~p~~~d~~liNG~g~-~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR-THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC-BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc-CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 223345789999999953 22222 2456789999999999999999999999999999999999999999999999
Q ss_pred eEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchh
Q 008066 267 SVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVT 346 (579)
Q Consensus 267 d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 346 (579)
+++.|+|||||||+|++++.+|+|+|++.....+. .+......|||+|.+..... +... .+.. ....
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~----p~~~-~~~~-~~~~----- 303 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE--GFDGGINSAILRYDGATTAD----PVTV-ASTV-HTKC----- 303 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSC----CCCC-CCSS-CSSB-----
T ss_pred eeEEEcCceEEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEECCCCCCC----CCCC-CCCC-Cccc-----
Confidence 99999999999999999987899999998754442 22333458999998754311 0000 0000 0000
Q ss_pred hcccCcCCCCCCC-----CCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCC
Q 008066 347 AFTKKLRSPQKVE-----VPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGI 421 (579)
Q Consensus 347 ~~~~~~~~l~p~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~ 421 (579)
.....+.++.+.. .+...++++.+.+.+. + ..|++||++|..+..|.+++.....
T Consensus 304 ~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~-----------------~--~~w~iNg~s~~~~~~P~L~~~~~g~- 363 (495)
T 3t6v_A 304 LIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA-----------------C--GNFVINGVSFTPPTVPVLLQICSGA- 363 (495)
T ss_dssp CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE-----------------T--TEEEETTBCCCCCSSCHHHHHHTTC-
T ss_pred cccccccccccccCCCccCCCCCcEEEEEEEEec-----------------C--cEEEEcCEecCCCCCcchhhhhcCC-
Confidence 0112233332221 2234566665544321 1 1589999999988885666553211
Q ss_pred CCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCC
Q 008066 422 PGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNP 501 (579)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~ 501 (579)
+... .....+.++.++.|++|||+|+|. .....||||||||+|+|++++.
T Consensus 364 ---~~~~--------------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g----- 413 (495)
T 3t6v_A 364 ---NTAA--------------------DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS----- 413 (495)
T ss_dssp ---CSST--------------------TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT-----
T ss_pred ---cCcc--------------------cccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC-----
Confidence 1000 011235688999999999999842 2467999999999999998642
Q ss_pred CCCCCCCCCCCCCcceeEEeCC-CcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCcccccc-CCCCCCCCCCC
Q 008066 502 KTDTSKFNLVDPPLRNTVGVPV-GGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEK-LEAPPPDYPVC 579 (579)
Q Consensus 502 ~~~~~~~~~~~p~~rDTv~vp~-~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~-~~~~p~~~~~c 579 (579)
...+|+.+|++||||.|++ |+|++|||+|||||.|+|||||+||++.||+++|++.+ +...+ ...|+.+.++|
T Consensus 414 ---~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~--~~~~~~~~~p~~~~~~C 488 (495)
T 3t6v_A 414 ---NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI--PNTASANPVPEAWSNLC 488 (495)
T ss_dssp ---CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH--HHHHHHCCCCHHHHHHH
T ss_pred ---CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh--hHhccccCCCHHHHHHh
Confidence 2357889999999999997 89999999999999999999999999999999997433 22333 34455555655
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2e-89 Score=750.01 Aligned_cols=482 Identities=26% Similarity=0.432 Sum_probs=364.4
Q ss_pred cCceEEEEEEEEEEe--eecCcee-eeEEEEcCCCCCCeEEEecCCEEEEEEEeCC-CCCceEEeCCccccCCCCCCCCC
Q 008066 32 NAKAHHHDFVIQATP--VKRLCKT-HNTITVNGMYPGPTLEVNNGDTLVVKVTNKA-RYNVTIHWHGVRQMRTAWADGPE 107 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l-~~~~siH~HG~~~~~~~~~DGv~ 107 (579)
.+.+++|+|++++.. ++++|+. +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++.+++|+||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 567899999999999 8899999 9999999999999999999999999999999 58999999999999888999999
Q ss_pred cccccccCC-CCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCCCCCCce-eEEeeeeccCChHHH
Q 008066 108 FVTQCPIRP-GMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFPKPKRET-PILLGEWWDANPIDV 184 (579)
Q Consensus 108 ~~~~~~i~P-G~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~ 184 (579)
+++||+|+| |++|+|+|++ .++||||||||...++. ||+|+|||++++.. ..|+|+ +|+++||++....++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHHH
Confidence 999999999 9999999997 78999999999988886 99999999988643 247777 999999999987776
Q ss_pred HHHhhhCCCCCCCCceEEEcCCCCCCCCCCC-CCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCc
Q 008066 185 VRQATRTGAAPNISDAYTINGQPGDLYNCSS-QDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKP 263 (579)
Q Consensus 185 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p 263 (579)
..... .+ .+..+++++|||+... .|.. ...+.+++++|++|||||||+|....+.|+|+||+|+||++||.+++|
T Consensus 184 ~~~~~-~~-~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 259 (559)
T 2q9o_A 184 VHFTQ-NN-APPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259 (559)
T ss_dssp HHHHT-TS-CCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred hhhhh-cC-CCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCc
Confidence 54332 22 3446789999999753 3532 235789999999999999999999999999999999999999999999
Q ss_pred eEEeEEEECcccEEEEEEEcCCCCcceEEEEEe--ccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCC
Q 008066 264 FTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARA--YASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFND 341 (579)
Q Consensus 264 ~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~--~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~ 341 (579)
+.++++.|+|||||||+|++++.+|+|+|++.. ...|. ........++|+|.+..... +... + .+. .+
T Consensus 260 ~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~--~~~~~~~~ail~y~~~~~~~----P~~~--~-~~~-~~ 329 (559)
T 2q9o_A 260 MTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACG--GSLNPHPAAIFHYAGAPGGL----PTDE--G-TPP-VD 329 (559)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTC--CBSSSCCEEEEEETTSCCSC----CCCC--C-CCC-CC
T ss_pred eEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccC--CCCCCceeEEEEECCCCCCC----CCCC--C-CcC-CC
Confidence 999999999999999999999878999999987 33332 12334568999998754311 0000 0 000 01
Q ss_pred ccchhhcccCcCCCCCCCCCC-----CCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhh
Q 008066 342 TATVTAFTKKLRSPQKVEVPT-----DIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQA 416 (579)
Q Consensus 342 ~~~~~~~~~~~~~l~p~~~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~ 416 (579)
. .+.. ...+.++.+..+|. ..+.++.+..... .+..+.|+|||++|..+...|+|..
T Consensus 330 ~-~~~~-~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~iNg~s~~~~~~~P~L~~ 391 (559)
T 2q9o_A 330 H-QCLD-TLDVRPVVPRSVPVNSFVKRPDNTLPVALDLT----------------GTPLFVWKVNGSDINVDWGKPIIDY 391 (559)
T ss_dssp C-TTCC-CSCCCBSSCCBCCCTTCCCCGGGEEEEEEECS----------------SSSSCEEEETTBCCCCCTTSCHHHH
T ss_pred c-cccc-ccccccCCCCCCCCcccccceeEEEEEEeecC----------------CCceEEEEECCEecccCCCCCcHhH
Confidence 0 0000 01122221211111 1123333332210 2234679999999976532244333
Q ss_pred cccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeec-CcEEEEEEecCCC-CCCCCCCeeeeccceEEEEe
Q 008066 417 HHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEY-GSRVQIVLQDTSI-FTPENHPIHIHGYDFYIIAE 494 (579)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~ve~~l~n~~~-~~~~~HP~HlHG~~F~vv~~ 494 (579)
...+. ++| ..+..++.++. +++++|+++|... ...+.||||||||+||||++
T Consensus 392 ~~~g~-----~~~---------------------~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~ 445 (559)
T 2q9o_A 392 ILTGN-----TSY---------------------PVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGR 445 (559)
T ss_dssp HHHTC-----CCC---------------------CGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEE
T ss_pred hhcCC-----ccC---------------------CCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEec
Confidence 22211 011 11345666765 5677888888430 01579999999999999999
Q ss_pred cC---------CCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCccc
Q 008066 495 GF---------GNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTE 565 (579)
Q Consensus 495 g~---------g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~ 565 (579)
+. |.|++..+...+|+.+|.|||||.||+++|++|||+|||||.|||||||+||++.|||++|+|..++
T Consensus 446 g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~-- 523 (559)
T 2q9o_A 446 SPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD-- 523 (559)
T ss_dssp SCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH--
T ss_pred ccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch--
Confidence 87 6666543345688999999999999999999999999999999999999999999999999986543
Q ss_pred cccCCC---CCCCCCCC
Q 008066 566 LEKLEA---PPPDYPVC 579 (579)
Q Consensus 566 ~~~~~~---~p~~~~~c 579 (579)
..++.. |+...++|
T Consensus 524 ~~~~~~~~~p~~~~~~C 540 (559)
T 2q9o_A 524 LRQRISQEDEDDFNRVC 540 (559)
T ss_dssp HGGGCCHHHHHHHHHHH
T ss_pred hhhccccCCchhhhhhc
Confidence 334432 33355666
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=6.6e-89 Score=738.17 Aligned_cols=466 Identities=27% Similarity=0.507 Sum_probs=358.0
Q ss_pred EEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-----CCceEEeCCccccCCCCCCCCCccc
Q 008066 36 HHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-----YNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 36 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-----~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
..|+|++++..+++||+.+++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4699999999999999999999999999 999999999999999999999 9999999999998888999999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeeccCChHHHHHHh
Q 008066 111 QCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGS-SYPFPKPKRETPILLGEWWDANPIDVVRQA 188 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 188 (579)
||+|+||++|+|+|++++++||||||||.+.++. ||+|+|||+++.+. +.++...++|++|+++||++....++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 9999999999999997789999999999998886 99999999987632 222333347999999999998765421
Q ss_pred hhCCCCCCCCceEEEcCCCCCCCCCCC-CCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEe
Q 008066 189 TRTGAAPNISDAYTINGQPGDLYNCSS-QDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTS 267 (579)
Q Consensus 189 ~~~g~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d 267 (579)
+ ...+++++|||+.. +.|.. ...+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13468999999974 56643 3458899999999999999999999999999999999999999999999999
Q ss_pred EEEECcccEEEEEEEcCCCCcceEEEEEeccCCCC--CCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccch
Q 008066 268 VIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPN--APFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATV 345 (579)
Q Consensus 268 ~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~--~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 345 (579)
++.|+|||||||+|++++.+|+|+|++.....+.. ..+......++|+|.+..... +.....+.....++
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~----p~~~~~~~~~~l~~---- 305 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD----PTTSANPNPAQLNE---- 305 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSC----CCCCCCSSCCBCCG----
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCC----CCCCCCCccCCCcc----
Confidence 99999999999999999778999999986532210 001222347999998755311 01111111111111
Q ss_pred hhcccCcCCCCCCCCC-----CCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccC
Q 008066 346 TAFTKKLRSPQKVEVP-----TDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHG 420 (579)
Q Consensus 346 ~~~~~~~~~l~p~~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~ 420 (579)
..++++.+...| ...+.++.+.... ++. .|++||++|..+..|.+++.....
T Consensus 306 ----~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-----------------~~~--~~~iNg~~~~~~~~P~l~~~~~g~ 362 (503)
T 1hfu_A 306 ----ADLHALIDPAAPGIPTPGAADVNLRFQLGF-----------------SGG--RFTINGTAYESPSVPTLLQIMSGA 362 (503)
T ss_dssp ----GGCBBSSSCSCSSCSSTTCSSEEEECCEEE-----------------ETT--EEEETTBCCCCCSSCHHHHHHTTC
T ss_pred ----ccccccCccCCCCcccCCcceEEEEEEeec-----------------cCc--eEEECCCccCCCCCcchhhhhcCC
Confidence 123333221222 1333333322211 122 589999999988774444432111
Q ss_pred CCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCC
Q 008066 421 IPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFN 500 (579)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~ 500 (579)
. . ..+ ...++.++.++.|++|||+++|.. ..+.||||||||+|||++++.+.
T Consensus 363 ~-~--~~~---------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~-- 414 (503)
T 1hfu_A 363 Q-S--AND---------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS-- 414 (503)
T ss_dssp C-S--GGG---------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--
T ss_pred c-c--ccc---------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--
Confidence 0 0 000 123467889999999999999533 36799999999999999997542
Q ss_pred CCCCCCCCCCCCCCcceeEEe-CCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCccccccCCC-CCCCCCC
Q 008066 501 PKTDTSKFNLVDPPLRNTVGV-PVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEA-PPPDYPV 578 (579)
Q Consensus 501 ~~~~~~~~~~~~p~~rDTv~v-p~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~~~~-~p~~~~~ 578 (579)
.+|+.+|.|||||.| |+++|++|||++||||.|+|||||+||++.|||++|.|.+.. ..++.. |+.+.++
T Consensus 415 ------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~ 486 (503)
T 1hfu_A 415 ------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQL 486 (503)
T ss_dssp ------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHH
T ss_pred ------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhh
Confidence 467889999999999 999999999999999999999999999999999999986533 234443 3355666
Q ss_pred C
Q 008066 579 C 579 (579)
Q Consensus 579 c 579 (579)
|
T Consensus 487 C 487 (503)
T 1hfu_A 487 C 487 (503)
T ss_dssp H
T ss_pred c
Confidence 6
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.5e-81 Score=670.44 Aligned_cols=404 Identities=22% Similarity=0.326 Sum_probs=319.7
Q ss_pred cCceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccc
Q 008066 32 NAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQ 111 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~ 111 (579)
.+.+++|+|++++..++++|..+++|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+ ++||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 34678999999999999999999999999999999999999999999999999999999999999876 699985
Q ss_pred cccCCCCeEEEEEEec-CCCcceeeeecccc----cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHH--
Q 008066 112 CPIRPGMSYTYRFTIQ-GQEGTLWWHAHSSW----LR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPID-- 183 (579)
Q Consensus 112 ~~i~PG~~~~y~f~~~-~~~Gt~~yH~h~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 183 (579)
+.|+||++|+|+|+++ +++||||||||.++ +. +||+|+|||+++.+.. +....++|++|+++||+.+....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 3599999999999983 58999999999865 33 3999999999876421 11134789999999998875200
Q ss_pred HHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCccc-C
Q 008066 184 VVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYL-K 262 (579)
Q Consensus 184 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~-~ 262 (579)
........| ..+++++|||+.+ +.+++++| +|||||||+|+.+.+.|+|+||+|+||+.||.++ +
T Consensus 166 ~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~ 231 (439)
T 2xu9_A 166 HTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEE 231 (439)
T ss_dssp CCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred CCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCC
Confidence 000000112 2458999999976 67999999 9999999999999999999999999999999998 8
Q ss_pred ceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCC-------------CCCCcceEEEEEeccCCCCCCCCCCC
Q 008066 263 PFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNA-------------PFDNTTTTAILEYKSAPCPAKKGLSI 329 (579)
Q Consensus 263 p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~-------------~~~~~~~~~il~y~~~~~~~~~~~~~ 329 (579)
|+.++++.|+|||||||+|++++ +|+|+|+++....+... ........++++|.+....
T Consensus 232 p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------- 303 (439)
T 2xu9_A 232 PLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP------- 303 (439)
T ss_dssp EEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC-------
T ss_pred ceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc-------
Confidence 99999999999999999999996 89999999865433210 0012356788899764431
Q ss_pred CCCCCCCCCCCCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCC
Q 008066 330 RPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPS 409 (579)
Q Consensus 330 ~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~ 409 (579)
..+|.... .+..+ .. ...++++.+..... + ..|.+||++|..+.
T Consensus 304 -~~~p~~l~------------~~~~l---~~-~~~~r~~~l~~~~~-----------------g--~~~~iNg~~~~~~~ 347 (439)
T 2xu9_A 304 -LPLPKALS------------PFPTL---PA-PVVTRRLVLTEDMM-----------------A--ARFFINGQVFDHRR 347 (439)
T ss_dssp -CCCCSCCC------------CCCCC---CC-CSEEEEEEEEEEGG-----------------G--TEEEETTBCCCTTC
T ss_pred -ccCcccCC------------CcccC---CC-CCcceEEEEEeecc-----------------C--ceEeECCEECCCCC
Confidence 00111000 01111 11 12235565554320 1 24889998886332
Q ss_pred chhhhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccce
Q 008066 410 NFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDF 489 (579)
Q Consensus 410 ~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F 489 (579)
. .+.++.|++++|+|+|.+ .+.||||||||+|
T Consensus 348 ~---------------------------------------------~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F 379 (439)
T 2xu9_A 348 V---------------------------------------------DLKGQAQTVEVWEVENQG---DMDHPFHLHVHPF 379 (439)
T ss_dssp C---------------------------------------------CEEECTTCEEEEEEEECS---SSCEEEEESSCCB
T ss_pred C---------------------------------------------ceecCCCCEEEEEEEcCC---CCCCCceeCCCcE
Confidence 1 257889999999999964 6799999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEE
Q 008066 490 YIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLV 559 (579)
Q Consensus 490 ~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V 559 (579)
||++++.+.+ .+|.|||||.|++++|++|||++||||.|+|||||++|++.|||++|+|
T Consensus 380 ~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~V 438 (439)
T 2xu9_A 380 QVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEV 438 (439)
T ss_dssp EEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred EEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEe
Confidence 9999875432 3799999999999999999999999999999999999999999999987
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.5e-81 Score=669.37 Aligned_cols=408 Identities=18% Similarity=0.233 Sum_probs=318.3
Q ss_pred ceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccccc
Q 008066 34 KAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQC 112 (579)
Q Consensus 34 ~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~ 112 (579)
.+++|+|++++..+++ +|..+++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.++ +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999887 99997 89
Q ss_pred ccCCCCeEEEEEEecCCCcceeeeecccccc-----cceeeeEEEeCCCCCCCCCCC--CCCceeEEeeeeccCChHHHH
Q 008066 113 PIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR-----ATVYGALIIHPKEGSSYPFPK--PKRETPILLGEWWDANPIDVV 185 (579)
Q Consensus 113 ~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 185 (579)
+|+||++|+|+|++++++||||||||.++.+ +||+|+|||+++++...+++. .++|++|+++||+++...+..
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999865699999999985533 399999999998754443443 478999999999987543221
Q ss_pred HHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEE-cCCeeEEEeeCCccc-Cc
Q 008066 186 RQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTI-ANHQFTVVGADASYL-KP 263 (579)
Q Consensus 186 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l-~gh~~~via~DG~~~-~p 263 (579)
. ...+.....+++++|||+.+ +.+++++| +|||||||+|+.+.+.|+| +||+|+||++||.++ +|
T Consensus 172 ~--~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 Y--NEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp C--CCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred c--ccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 1 11222345679999999987 67999999 9999999999999999999 899999999999998 89
Q ss_pred eEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCC------CCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCC
Q 008066 264 FTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNA------PFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLP 337 (579)
Q Consensus 264 ~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~------~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p 337 (579)
+.++++.|+|||||||+|+++ .+++|+|++.....+... ........++++|....... ... ..+|
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~----~~~---~~~p 310 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP----LVT---DSLP 310 (451)
T ss_dssp EEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----------CCC
T ss_pred eEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc----Ccc---ccCc
Confidence 999999999999999999999 478999998764322100 01122346788888654311 000 0111
Q ss_pred CCCCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhc
Q 008066 338 AFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAH 417 (579)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~ 417 (579)
. .|.++.+... ..+.+..+.+. + .|+|||++|..+.
T Consensus 311 ~------------~L~~~~~~~~--~~~~~~~~~l~-------------------~---~~~iNg~~f~~~~-------- 346 (451)
T 2uxt_A 311 M------------RLLPTEIMAG--SPIRSRDISLG-------------------D---DPGINGQLWDVNR-------- 346 (451)
T ss_dssp S------------CSSSSCCCCC--CCSEEEEEEEC-------------------S---SSSBTTBCCCTTC--------
T ss_pred c------------ccCCCCCCCC--CCcceEEEEEe-------------------e---EEEECCEeCCCCC--------
Confidence 0 1222211111 12222222221 1 3789998775321
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCC
Q 008066 418 HHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFG 497 (579)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g 497 (579)
..+.++.|++++|+|+|. +.||||||||+|||++++..
T Consensus 347 -------------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~ 384 (451)
T 2uxt_A 347 -------------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA 384 (451)
T ss_dssp -------------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB
T ss_pred -------------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc
Confidence 135789999999999994 48999999999999998522
Q ss_pred CCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCcee----EEEEecchhhHHccceEEEEEecCcc
Q 008066 498 NFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGV----WLMHCHLDVHITWGLAMAFLVENGVT 564 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~----wl~HCHi~~H~~~GM~~~~~V~~~~~ 564 (579)
.+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|+|.+...
T Consensus 385 ---------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 385 ---------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp ---------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred ---------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 345668999999999 899999999999988 99999999999999999999987544
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.7e-79 Score=666.11 Aligned_cols=422 Identities=21% Similarity=0.293 Sum_probs=319.7
Q ss_pred ceEEEEEEEEEEe--eecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccc
Q 008066 34 KAHHHDFVIQATP--VKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQ 111 (579)
Q Consensus 34 ~~~~~~l~~~~~~--~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~ 111 (579)
.++.|+|++++.. +.++|+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+. +||++ |
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---E 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---S
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---C
Confidence 3578999999644 668899999999999999999999999999999999999999999999998764 99974 7
Q ss_pred cccCCCCeEEEEEEecCCCcceeeeecccccc-----cceeeeEEEeCCCCCCCCCCC--CCCceeEEeeeeccCChHHH
Q 008066 112 CPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR-----ATVYGALIIHPKEGSSYPFPK--PKRETPILLGEWWDANPIDV 184 (579)
Q Consensus 112 ~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~ 184 (579)
|+|+||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+...+++. .++|++|+++||+.+...++
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 99999999999999866689999999998754 399999999999876555554 26789999999987653321
Q ss_pred HHHhhhCCC-CCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcC-------CeeEEEee
Q 008066 185 VRQATRTGA-APNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIAN-------HQFTVVGA 256 (579)
Q Consensus 185 ~~~~~~~g~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~g-------h~~~via~ 256 (579)
.. ..+. ....++.++|||+.+ +.+.+++ ++|||||||+|+.+.+.|+|++ |+|+||++
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~ 255 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS 255 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE
T ss_pred ec---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe
Confidence 11 1111 234578999999987 4588888 5999999999999999999987 99999999
Q ss_pred CCccc-CceEEeEEEECcccEEEEEEEcCCCCc-ceEEEEEecc-CCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCC
Q 008066 257 DASYL-KPFTTSVIMLGPGQTTDVLIKGDQPPS-RYYLAARAYA-SAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVM 333 (579)
Q Consensus 257 DG~~~-~p~~~d~l~l~pG~R~dv~v~~~~~~g-~~~l~~~~~~-~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~ 333 (579)
||.++ +|+.++++.|+|||||||+|++++.+| +|+|+..... .+...........++++|........ ...
T Consensus 256 DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~---~~~--- 329 (534)
T 3abg_A 256 DSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ---PDT--- 329 (534)
T ss_dssp TTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC---SCC---
T ss_pred CCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC---CCC---
Confidence 99865 999999999999999999999997677 5999875321 11100111223458889875443100 000
Q ss_pred CCCCCCCCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhh
Q 008066 334 PPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSL 413 (579)
Q Consensus 334 p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~ 413 (579)
...| ..+..+.....+...++++.+ +. . ...|+|||++|..+..
T Consensus 330 ~~~P------------~~L~~~~~p~~~~~~~~~~~~----~~---------------~--~~~w~iNG~~f~~~~~--- 373 (534)
T 3abg_A 330 SVVP------------ANLRDVPFPSPTTNTPRQFRF----GR---------------T--GPTWTINGVAFADVQN--- 373 (534)
T ss_dssp CCCC------------CCCCCCSCCCCCCCCCEEEEC----SC---------------C--CSTTCCCCBTTBCTTS---
T ss_pred CCCc------------cccccCCCCCCccccceEEEE----ec---------------c--CceeEECCcccCCCCC---
Confidence 0011 112221100111223343332 11 1 1248899988864322
Q ss_pred hhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEE
Q 008066 414 LQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIA 493 (579)
Q Consensus 414 l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~ 493 (579)
| ....++.|++++|+|+|.+ ..+.||||||||+|||++
T Consensus 374 --------------------p--------------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~ 411 (534)
T 3abg_A 374 --------------------R--------------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVIS 411 (534)
T ss_dssp --------------------C--------------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEE
T ss_pred --------------------c--------------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEE
Confidence 0 1235789999999999964 246999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEE-ecCceeEEEEecchhhHHccceEEEEEecCc
Q 008066 494 EGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFV-ADNPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 494 ~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~-adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
++.|.+. . ...++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.|...+
T Consensus 412 ~~~g~~~--~--~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 412 RTSGNNA--R--TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp ESSCCSS--S--CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EcCCCCc--C--cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9665432 1 1244556 8999999999999999998 8999999999999999999999999998755
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=8.7e-78 Score=652.63 Aligned_cols=429 Identities=18% Similarity=0.253 Sum_probs=315.4
Q ss_pred eEEEEEEEEEEeee--cCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC----------------------CceE
Q 008066 35 AHHHDFVIQATPVK--RLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY----------------------NVTI 90 (579)
Q Consensus 35 ~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~----------------------~~si 90 (579)
...|+|++++.... +++..+++|+|||++|||+||+++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 45599999998765 45678999999999999999999999999999999975 8999
Q ss_pred EeCCccccCCCCCCCCCc--ccccccCCCCeE---EEEEEecCCCcceeeeeccccc----c-cceeeeEEEeCCCCCCC
Q 008066 91 HWHGVRQMRTAWADGPEF--VTQCPIRPGMSY---TYRFTIQGQEGTLWWHAHSSWL----R-ATVYGALIIHPKEGSSY 160 (579)
Q Consensus 91 H~HG~~~~~~~~~DGv~~--~~~~~i~PG~~~---~y~f~~~~~~Gt~~yH~h~~~~----~-~Gl~G~liV~~~~~~~~ 160 (579)
||||+++.+ ++||+|+ ++||+|+||++| +|+|++++++||||||||.++. . +||+|+|||+++.+...
T Consensus 105 HwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 999999875 4999996 789999999555 9999876789999999999763 2 39999999999876655
Q ss_pred CCCCCCCceeEEeeeeccCChHHHHHHhh----------hCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEE
Q 008066 161 PFPKPKRETPILLGEWWDANPIDVVRQAT----------RTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNL 230 (579)
Q Consensus 161 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~r 230 (579)
+++..++|++|+++||+++...+...... ........+++++|||+.+ +.+.+++| +||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEE
Confidence 56667899999999998765432211100 0001234578999999987 56899885 899
Q ss_pred EEEeecCCCccEEEEEcCC-eeEEEeeCCccc-CceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCc
Q 008066 231 LRVINSGLNQPLFFTIANH-QFTVVGADASYL-KPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNT 308 (579)
Q Consensus 231 lRliN~g~~~~~~~~l~gh-~~~via~DG~~~-~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~ 308 (579)
|||||+|+.+.+.|+|+|| +|+||++||.++ +|+.++++.|+|||||||+|++++.+|++.. ......|. ..+...
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~-l~~~~~~~-~~~~~~ 329 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESII-LANSAGCG-GDVNPE 329 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEE-EEECCCSS-SSCCTT
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEE-EEeccccc-ccCCCC
Confidence 9999999999999999999 999999999998 8999999999999999999999976787433 22222221 111122
Q ss_pred ceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCCCC-CCCCCceeEEEEeccCcCCCCCCCCCCc
Q 008066 309 TTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVE-VPTDIDESLFFTVGLGLNNCPRNFRSSR 387 (579)
Q Consensus 309 ~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (579)
...++++|........ .... .+|. .+..+.... .+...++++.+......
T Consensus 330 ~~~~il~~~~~~~~~~---~~~~---~~p~------------~l~~~~~~~~~~~~~~~~~~l~~~~~~----------- 380 (513)
T 2wsd_A 330 TDANIMQFRVTKPLAQ---KDES---RKPK------------YLASYPSVQHERIQNIRTLKLAGTQDE----------- 380 (513)
T ss_dssp TTTEEEEEECCSCCSS---CCCC---CCCS------------BCSCCGGGCCCCEEEEEEEEEEEEECT-----------
T ss_pred CCcceEEEEeccCccc---CccC---CCCc------------cccCCCCcccCCCcceEEEEEEeecCC-----------
Confidence 3457889976542110 0011 1111 011110000 01123444444433211
Q ss_pred ccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEE
Q 008066 388 CQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQI 467 (579)
Q Consensus 388 ~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~ 467 (579)
.+ ...|.+||++|..+. .+.++.|++++|
T Consensus 381 ----~g-~~~~~iNg~~~~~~~----------------------------------------------~~~~~~g~~~~w 409 (513)
T 2wsd_A 381 ----YG-RPVLLLNNKRWHDPV----------------------------------------------TETPKVGTTEIW 409 (513)
T ss_dssp ----TS-CEEEEETTBCTTSCC----------------------------------------------CBCCBTTCEEEE
T ss_pred ----CC-CceEeECCccCCCcc----------------------------------------------cEecCCCCEEEE
Confidence 12 235779988764221 135678999999
Q ss_pred EEecCCCCCCCCCCeeeeccceEEEEecCC---CCCCCC------CCCCCCCCCCCcceeEEeCCCcEEEEEEEe-cCce
Q 008066 468 VLQDTSIFTPENHPIHIHGYDFYIIAEGFG---NFNPKT------DTSKFNLVDPPLRNTVGVPVGGWAVIRFVA-DNPG 537 (579)
Q Consensus 468 ~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vp~~g~v~irf~a-dnpG 537 (579)
+|+|.+ .+.||||||||+|||++++.+ .|++.. ........++.|||||.|+++++++|+|++ ||||
T Consensus 410 ~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG 486 (513)
T 2wsd_A 410 SIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG 486 (513)
T ss_dssp EEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE
T ss_pred EEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC
Confidence 999954 579999999999999998642 121110 000112234569999999999999999998 8999
Q ss_pred eEEEEecchhhHHccceEEEEEec
Q 008066 538 VWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 538 ~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
.|+|||||++|++.|||+.|+|.+
T Consensus 487 ~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 487 RYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CEEEEcCChhhhhcCCceeEEEeC
Confidence 999999999999999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.6e-77 Score=639.74 Aligned_cols=417 Identities=23% Similarity=0.338 Sum_probs=310.9
Q ss_pred ccCceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcc
Q 008066 31 ANAKAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFV 109 (579)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 109 (579)
+.+.+++|+|++++..+++ +|+.+++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.+ ++||++
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 4567899999999999996 68999999999999999999999999999999999999999999999864 599986
Q ss_pred cccccCCCCeEEEEEEecCC-Ccceeeeecccc----cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHH
Q 008066 110 TQCPIRPGMSYTYRFTIQGQ-EGTLWWHAHSSW----LR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPID 183 (579)
Q Consensus 110 ~~~~i~PG~~~~y~f~~~~~-~Gt~~yH~h~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 183 (579)
||+|+||++|+|+|+++++ +||||||||.++ +. .||+|+|||+++++...++ ++++ |+++||+.+...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999998443 799999999754 33 3999999999987654433 3455 9999998765432
Q ss_pred HHH---HhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcc
Q 008066 184 VVR---QATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASY 260 (579)
Q Consensus 184 ~~~---~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~ 260 (579)
... .....| ..++.++|||+.+ +.+++++|+ ||||||+|+.+.+.|+|+||+|+||++||..
T Consensus 197 ~~~~~~~~~~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 110 000112 3468999999987 679999998 9999999999999999999999999999877
Q ss_pred c-CceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 008066 261 L-KPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAF 339 (579)
Q Consensus 261 ~-~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~ 339 (579)
+ +|+.++++.|+|||||||+|+++ +++.|.|.+..................++++..... .+ .+|.
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-------~lP~---- 328 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NV-------ELPK---- 328 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CC-------CCCS----
T ss_pred cCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC-Cc-------cCCc----
Confidence 6 99999999999999999999999 578899988654321100001122344444433221 00 0111
Q ss_pred CCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCe-------eeeeecceeeecCCchh
Q 008066 340 NDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTR-------FTASMNNVSFVLPSNFS 412 (579)
Q Consensus 340 ~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~in~~~~~~p~~~~ 412 (579)
.+..+.+... ...++++.+..... .+. . ... .+.. ..|+|||+.|...
T Consensus 329 -----------~l~~~~~~~~-~~~~r~~~l~~~~~--~~~-----~-~~~-~~~~~~~~~~~~~~~iNG~~~~~~---- 383 (481)
T 3zx1_A 329 -----------NLKIFKPSEE-PKEFKEIIMSEDHM--QMH-----G-MMG-KSEGELKIALASMFLINRKSYDLK---- 383 (481)
T ss_dssp -----------CSCCCCCCCC-CCEEEEEEEEECCS--TTT-----T-GGG-CCHHHHHHHHHTTEEETTBCCCTT----
T ss_pred -----------cccCCCCCCC-CCcEEEEEEeccch--hcc-----c-ccc-cccccccccccceeEECCEeCCCC----
Confidence 0111111111 12334444433211 000 0 000 0000 1378888766421
Q ss_pred hhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEE
Q 008066 413 LLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYII 492 (579)
Q Consensus 413 ~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv 492 (579)
...+.++.|++|+|+|.|.+ .+.|||||||+.|||+
T Consensus 384 -----------------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl 419 (481)
T 3zx1_A 384 -----------------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELI 419 (481)
T ss_dssp -----------------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEE
T ss_pred -----------------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEE
Confidence 12368899999999999954 7899999999999999
Q ss_pred Eec-CCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEec
Q 008066 493 AEG-FGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 493 ~~g-~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
++. .|. .....++.|||||.|+|+++++|+|++||||.|+|||||++|++.|||+.|+|.+
T Consensus 420 ~~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 420 SSKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp EEEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred EecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 983 121 1122358899999999999999999999999999999999999999999999863
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.9e-77 Score=635.90 Aligned_cols=397 Identities=18% Similarity=0.280 Sum_probs=300.5
Q ss_pred eEEEEEEEEEEeeecCceeeeEEEEcCC-CCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccc
Q 008066 35 AHHHDFVIQATPVKRLCKTHNTITVNGM-YPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCP 113 (579)
Q Consensus 35 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~-~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~ 113 (579)
.+.|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++.+ ++||+++ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 45677776 999999 9999999999999999999999999999999999864 5999987 99
Q ss_pred cCCCCeEEEEEEecCCCcceeeeeccc----ccc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHh
Q 008066 114 IRPGMSYTYRFTIQGQEGTLWWHAHSS----WLR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQA 188 (579)
Q Consensus 114 i~PG~~~~y~f~~~~~~Gt~~yH~h~~----~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 188 (579)
|+||++|+|+|++++++||||||||.+ .+. +||+|+|||+++++. .+++...+|++|+++||+++. .++....
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccc
Confidence 999999999999866899999999954 444 399999999998765 333322389999999998876 3221100
Q ss_pred -hhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEE--cC---CeeEEEeeCCcccC
Q 008066 189 -TRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTI--AN---HQFTVVGADASYLK 262 (579)
Q Consensus 189 -~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l--~g---h~~~via~DG~~~~ 262 (579)
...+.....+++++|||+.+ +.+++++| +|||||||+|+.+.+.|+| +| |+|+||++||.+++
T Consensus 159 ~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~ 227 (448)
T 3aw5_A 159 TPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLA 227 (448)
T ss_dssp CHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEE
T ss_pred cccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccC
Confidence 00001123568999999987 67999999 9999999999999999999 99 99999999999996
Q ss_pred -ceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCC---------CCCCcceEEEEEeccCCCCCCCCCCCCCC
Q 008066 263 -PFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNA---------PFDNTTTTAILEYKSAPCPAKKGLSIRPV 332 (579)
Q Consensus 263 -p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~---------~~~~~~~~~il~y~~~~~~~~~~~~~~~~ 332 (579)
|..++++.|+|||||||+|++++ +.|+|++.....+... ........++++|.+..... .+..
T Consensus 228 ~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~ 300 (448)
T 3aw5_A 228 RPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV-----PVEA 300 (448)
T ss_dssp EEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC-----CCCC
T ss_pred CceEeceEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC-----Cccc
Confidence 99999999999999999999983 7899998865432110 11123467788886543311 0000
Q ss_pred CCCCCCCCCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchh
Q 008066 333 MPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFS 412 (579)
Q Consensus 333 ~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ 412 (579)
+..+.+...+...++++.+... ...|++||++|..+..
T Consensus 301 -------------------L~~lp~~~~~~~~~~~~~l~~~---------------------~~~~~iNg~~~~~~~p-- 338 (448)
T 3aw5_A 301 -------------------LSDPPPEPPKPTRTRRFALSLS---------------------GMQWTINGMFWNASNP-- 338 (448)
T ss_dssp -------------------CSCCCCCCCCCSEEEEEEEEEE---------------------TTEEEETTBCCCTTCT--
T ss_pred -------------------cCCCCCCCCCCCceEEEEEeCC---------------------CceeeECCCcCCCCCC--
Confidence 1111111122334455554432 1248999998863211
Q ss_pred hhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEE-eecCcEEEEEEecCCCCCCCCCCeeeeccceEE
Q 008066 413 LLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYK-LEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYI 491 (579)
Q Consensus 413 ~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~v 491 (579)
.+. ++.|++|+|+|+|.+ ..+.||||||||+|||
T Consensus 339 -------------------------------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~V 373 (448)
T 3aw5_A 339 -------------------------------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWI 373 (448)
T ss_dssp -------------------------------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEE
T ss_pred -------------------------------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEE
Confidence 123 689999999999954 1579999999999999
Q ss_pred EEecCCCCCCCCCCCCC----CCCCCCcceeEEeCCCcEEEEE--EE---ecCceeEEEEecchhhHHccceEEEEEe
Q 008066 492 IAEGFGNFNPKTDTSKF----NLVDPPLRNTVGVPVGGWAVIR--FV---ADNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 492 v~~g~g~~~~~~~~~~~----~~~~p~~rDTv~vp~~g~v~ir--f~---adnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
++++ |.+....+...+ +..++.|||||.|+++++++|+ |+ +||| |+|||||++|++.|||++|+|.
T Consensus 374 l~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 374 IERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 9984 433211111122 3345689999999999999655 99 9999 9999999999999999999873
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=5.2e-76 Score=656.61 Aligned_cols=464 Identities=19% Similarity=0.253 Sum_probs=306.8
Q ss_pred CceEEEEEEEEEEeee--cCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCC-----------------------
Q 008066 33 AKAHHHDFVIQATPVK--RLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYN----------------------- 87 (579)
Q Consensus 33 ~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~----------------------- 87 (579)
..++.|+|++++.... +++....+|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 3456788888887755 566788999999999999999999999999999999654
Q ss_pred ------------------ceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeeccccc----c-c
Q 008066 88 ------------------VTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWL----R-A 144 (579)
Q Consensus 88 ------------------~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~----~-~ 144 (579)
++|||||+++.+ ++||++ ||+|+||++|+|+|++++++||||||||.++. . +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678999988765 489874 99999999999999987778999999998653 3 3
Q ss_pred ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHhh-------------hC---CCCCCCCceEEEcCCCC
Q 008066 145 TVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQAT-------------RT---GAAPNISDAYTINGQPG 208 (579)
Q Consensus 145 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~~---g~~~~~~~~~liNG~~~ 208 (579)
||+|+|||+++.+..++++..++|++|+++||+++...+...... .. ......++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999988777777778999999999997654322110000 00 01234568899999987
Q ss_pred CCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCC-------eeEEEeeCCccc-CceEEe------EEEECcc
Q 008066 209 DLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANH-------QFTVVGADASYL-KPFTTS------VIMLGPG 274 (579)
Q Consensus 209 ~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~l~l~pG 274 (579)
+.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|++|
T Consensus 265 ----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 265 ----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 5677765 58999999999999999999998 499999999998 676654 7999999
Q ss_pred cEEEEEEEcCCCCcceEEEEEeccCCCCC---CCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccC
Q 008066 275 QTTDVLIKGDQPPSRYYLAARAYASAPNA---PFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKK 351 (579)
Q Consensus 275 ~R~dv~v~~~~~~g~~~l~~~~~~~~~~~---~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 351 (579)
|||||+|++++.+|.++............ .........+++|....... .....+|.......
T Consensus 334 eRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~---------- 399 (612)
T 3gyr_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCE----EDSFALPEVLSGSF---------- 399 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSC----CCCCCCCSSCCSSC----------
T ss_pred eEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCC----CCcccccccccccc----------
Confidence 99999999997767655443322111100 01122344566665433211 11111111110000
Q ss_pred cCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeeccee----eecCCchhhhhhcccCCCCcccC
Q 008066 352 LRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVS----FVLPSNFSLLQAHHHGIPGVFTT 427 (579)
Q Consensus 352 ~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~----~~~p~~~~~l~~~~~~~~~~~~~ 427 (579)
... .... ....+.......... ........+.+.... +..+.. ..+..
T Consensus 400 -~~~-~~~~--~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------- 451 (612)
T 3gyr_A 400 -RRM-SHDI--PHGHRLIVLTPPGTK------------GSGGHPEIWEMAEVEDPADVQVPAE-GVIQV----------- 451 (612)
T ss_dssp -CCC-CTTS--CCEEEEEEEECTTCT------------TTTTCCEEEEEEECC-----CCSCT-TEEEE-----------
T ss_pred -ccc-cccc--ccccccccccccccc------------ccccccccccccccccccccccccc-ceeee-----------
Confidence 000 0000 001111110000000 000001111111100 000000 00000
Q ss_pred CCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCC----
Q 008066 428 DFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKT---- 503 (579)
Q Consensus 428 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~---- 503 (579)
......+..+..++. ...+...+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++...
T Consensus 452 ~~~~~~~~~~~~n~~-------~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~ 521 (612)
T 3gyr_A 452 TGADGRTKTYRRTAR-------TFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALG 521 (612)
T ss_dssp ECTTSCEEEEEEEEC-------STTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTT
T ss_pred ccCCCccccccccCc-------cCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccccc
Confidence 000000001111110 112345678999999999999965 679999999999999998643322210
Q ss_pred -----------CCCCCCCCCCCcceeEEeCCCcEEEEEEE-ecCceeEEEEecchhhHHccceEEEEEecCcc
Q 008066 504 -----------DTSKFNLVDPPLRNTVGVPVGGWAVIRFV-ADNPGVWLMHCHLDVHITWGLAMAFLVENGVT 564 (579)
Q Consensus 504 -----------~~~~~~~~~p~~rDTv~vp~~g~v~irf~-adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~ 564 (579)
.....+..++.|||||.|++++|++|||+ +||||.|||||||++|||.|||+.|+|.+++.
T Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 522 GTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 01235567889999999999999999998 79999999999999999999999999987543
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.1e-75 Score=623.01 Aligned_cols=431 Identities=20% Similarity=0.268 Sum_probs=308.0
Q ss_pred CceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccccc
Q 008066 33 AKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQC 112 (579)
Q Consensus 33 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~ 112 (579)
...+.|+|++++..++++|+.+++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.+ ++||++ ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC---cC
Confidence 4567899999999999999999999999999999999999999999999999999999999999876 499986 89
Q ss_pred ccCCCCeEEEEEEecCCCcceeeeecccccc-----cceeeeEEEeCCCCCCCCCCC--CCCceeEEeeeeccCChHHHH
Q 008066 113 PIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR-----ATVYGALIIHPKEGSSYPFPK--PKRETPILLGEWWDANPIDVV 185 (579)
Q Consensus 113 ~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 185 (579)
+|+||++++|+|++.+++||||||||.++.+ .||+|+|||+++++...+++. ..+|++|+++||+.+...+..
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 9999999999999866689999999986533 399999999998765544443 246899999999886533211
Q ss_pred HHh-hhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEE-cCCeeEEEeeCCccc-C
Q 008066 186 RQA-TRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTI-ANHQFTVVGADASYL-K 262 (579)
Q Consensus 186 ~~~-~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l-~gh~~~via~DG~~~-~ 262 (579)
... .........++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred ccccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 000 00000123568999999987 44555 5789999999999999999999 699999999999987 8
Q ss_pred ceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCc
Q 008066 263 PFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDT 342 (579)
Q Consensus 263 p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~ 342 (579)
|+.+++|.|+|||||||+|+++ ..+.|.+++..................+++........ ...+|.
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~P~------- 304 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISA------SGALPD------- 304 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEEC------CCCCCS-------
T ss_pred ccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCC------CCCCCc-------
Confidence 9999999999999999999999 47889998765332110000111223344333211100 000111
Q ss_pred cchhhcccCcCCCCCC-CCCCCCceeEEEEeccCc--------------CCCCCCCC---------CCccc-CCCCCee-
Q 008066 343 ATVTAFTKKLRSPQKV-EVPTDIDESLFFTVGLGL--------------NNCPRNFR---------SSRCQ-GPNGTRF- 396 (579)
Q Consensus 343 ~~~~~~~~~~~~l~p~-~~p~~~~~~~~~~~~~~~--------------~~~~~~~~---------~~~~~-~~~~~~~- 396 (579)
.+..+.+. ......++++.+.+...+ .... +.. ...+. ...|..+
T Consensus 305 --------~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~g~~~~ 375 (488)
T 3od3_A 305 --------TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMA-GMDHSQMMGHMGHGNMNHMNHGGKFD 375 (488)
T ss_dssp --------CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGT-TSCHHHHCCCSCCCCCCCSCCCGGGC
T ss_pred --------ccccCCCCcccccccceEEEEEecccccccccccccccccccccc-cccccccccccccCcccccccccccc
Confidence 01111000 011123455555432100 0000 000 00000 0001112
Q ss_pred ---eeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCC
Q 008066 397 ---TASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTS 473 (579)
Q Consensus 397 ---~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~ 473 (579)
.|+|||++|.... ..+.++.|++++|+|.|.+
T Consensus 376 ~~~~~~ING~~~~~~~---------------------------------------------~~~~~~~G~~e~w~l~N~~ 410 (488)
T 3od3_A 376 FHHANKINGQAFDMNK---------------------------------------------PMFAAAKGQYERWVISGVG 410 (488)
T ss_dssp GGGCEEETTBCCCTTC---------------------------------------------CSEECCBSSCEEEEEECTT
T ss_pred ccceeeECCeeCCCCC---------------------------------------------CceEcCCCCEEEEEEEeCC
Confidence 2688888775211 2367899999999999965
Q ss_pred CCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe----cCceeEEEEecchhhH
Q 008066 474 IFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVA----DNPGVWLMHCHLDVHI 549 (579)
Q Consensus 474 ~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a----dnpG~wl~HCHi~~H~ 549 (579)
+.+.|||||||++|+|+++.... ....++.|||||.|+ |+++.|+|++ ++||.|||||||++|+
T Consensus 411 --~~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~He 478 (488)
T 3od3_A 411 --DMMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHE 478 (488)
T ss_dssp --CCCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHH
T ss_pred --CCCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHH
Confidence 25689999999999999985321 112346799999999 9999999997 4678999999999999
Q ss_pred HccceEEEEE
Q 008066 550 TWGLAMAFLV 559 (579)
Q Consensus 550 ~~GM~~~~~V 559 (579)
|.|||+.|+|
T Consensus 479 d~GMm~~f~V 488 (488)
T 3od3_A 479 DTGMMLGFTV 488 (488)
T ss_dssp HTTCEEEEEC
T ss_pred hcCCcEEEEC
Confidence 9999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=5.4e-73 Score=619.15 Aligned_cols=447 Identities=19% Similarity=0.285 Sum_probs=313.7
Q ss_pred CceEEEEEEEEEEeee--cCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCC-----------------------
Q 008066 33 AKAHHHDFVIQATPVK--RLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYN----------------------- 87 (579)
Q Consensus 33 ~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~----------------------- 87 (579)
...+.|+|++++..+. +++..+.+|+|||++|||+|++++||+|+|+++|+|+++
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 3467899999998876 445689999999999999999999999999999999853
Q ss_pred ------------------ceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccc----cc-c
Q 008066 88 ------------------VTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW----LR-A 144 (579)
Q Consensus 88 ------------------~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~----~~-~ 144 (579)
++|||||+++.+. +||++ ||+|+||++++|+|++.+++||||||||.++ +. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999998876 89985 8999999999999998668999999999986 33 4
Q ss_pred ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHH-HHH-Hh------hh----CCCC----CCCCceEEEcCCCC
Q 008066 145 TVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPID-VVR-QA------TR----TGAA----PNISDAYTINGQPG 208 (579)
Q Consensus 145 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~~----~~~~~~~liNG~~~ 208 (579)
||+|+|||+++++...+++..++|++|+++||+++.... .+. .. +. .++. +..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987666666778999999999999864211 000 00 00 1111 24678999999987
Q ss_pred CCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCC-------eeEEEeeCCccc-CceEEe------EEEECcc
Q 008066 209 DLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANH-------QFTVVGADASYL-KPFTTS------VIMLGPG 274 (579)
Q Consensus 209 ~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~l~l~pG 274 (579)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 67999999 9999999999999999999999 899999999999 799999 9999999
Q ss_pred cEEEEEEEcCCCCc-ceEEEEEeccCCCCCCCC---CcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhccc
Q 008066 275 QTTDVLIKGDQPPS-RYYLAARAYASAPNAPFD---NTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTK 350 (579)
Q Consensus 275 ~R~dv~v~~~~~~g-~~~l~~~~~~~~~~~~~~---~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 350 (579)
|||||+|++++.+| +++|+........ .... ......|+++....... .....+|..-. .
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~-g~~~~~~~~~~~~vm~f~V~~~~~----~~~~~~P~~L~--~--------- 397 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPA-GTPDPLGGVRYPEVMEFRVRETCE----EDSFALPEVLS--G--------- 397 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCT-TSCBGGGTBSCCEEEEEEEECCSC----CCCCCCCSSCC--S---------
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCC-CccccccCccccceEEEEEccCCC----CCCCCCChhhc--c---------
Confidence 99999999998766 4888765321110 0000 01112355554322210 01111111000 0
Q ss_pred CcCCCCCCCCCCCCceeEEEEe---ccCcC-----------CCCCCC---CCC--cccCCCCCeeeeeecceeeecCCch
Q 008066 351 KLRSPQKVEVPTDIDESLFFTV---GLGLN-----------NCPRNF---RSS--RCQGPNGTRFTASMNNVSFVLPSNF 411 (579)
Q Consensus 351 ~~~~l~p~~~p~~~~~~~~~~~---~~~~~-----------~~~~~~---~~~--~~~~~~~~~~~~~in~~~~~~p~~~ 411 (579)
....+.+ ..+ ..+++.+.. ..+.. ..+... ... .....+|....|++|++.|.
T Consensus 398 ~~~~l~~-~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~----- 469 (612)
T 2g23_A 398 SFRRMSH-DIP--HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN----- 469 (612)
T ss_dssp SCCCCCT-TSC--CEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-----
T ss_pred ccccCCc-ccc--cceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC-----
Confidence 0000100 000 011111110 00000 000000 000 00001222233445544332
Q ss_pred hhhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEE
Q 008066 412 SLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYI 491 (579)
Q Consensus 412 ~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~v 491 (579)
....+.++.|++|+|+|.|.+ .+.|||||||+.|||
T Consensus 470 -----------------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~V 505 (612)
T 2g23_A 470 -----------------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQV 505 (612)
T ss_dssp -----------------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEE
T ss_pred -----------------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEE
Confidence 223578999999999999964 679999999999999
Q ss_pred EEecCCCC---CCCCC------------CCCCCCCCCCcceeEEeCCCcEEEEEEEec-CceeEEEEecchhhHHccceE
Q 008066 492 IAEGFGNF---NPKTD------------TSKFNLVDPPLRNTVGVPVGGWAVIRFVAD-NPGVWLMHCHLDVHITWGLAM 555 (579)
Q Consensus 492 v~~g~g~~---~~~~~------------~~~~~~~~p~~rDTv~vp~~g~v~irf~ad-npG~wl~HCHi~~H~~~GM~~ 555 (579)
++++.+.+ +.... ....+..++.|||||.|+|+++++|+|+++ |||.|||||||++|++.|||+
T Consensus 506 l~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~ 585 (612)
T 2g23_A 506 LGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMR 585 (612)
T ss_dssp EEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEE
T ss_pred ecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCce
Confidence 99853221 11110 023455667899999999999999999998 999999999999999999999
Q ss_pred EEEEecCc
Q 008066 556 AFLVENGV 563 (579)
Q Consensus 556 ~~~V~~~~ 563 (579)
.|+|.+..
T Consensus 586 ~f~V~p~~ 593 (612)
T 2g23_A 586 PFVVMPPE 593 (612)
T ss_dssp EEEEECHH
T ss_pred EEEECchh
Confidence 99997643
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.6e-53 Score=433.97 Aligned_cols=272 Identities=26% Similarity=0.451 Sum_probs=228.9
Q ss_pred ceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccccc
Q 008066 34 KAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQC 112 (579)
Q Consensus 34 ~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~ 112 (579)
.+|+|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|.++.+++|||||+.+.++.++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3799999999999886 578899999999999999999999999999999999999999999999887789999999999
Q ss_pred ccCCCCeEEEEEEecCCCcceeeeecccccc----cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHh
Q 008066 113 PIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR----ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQA 188 (579)
Q Consensus 113 ~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 188 (579)
+|+||++++|+|++ +++||||||||.+.++ +||+|+|||++++..+.+. ..++|++|+++||+...... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999997 7999999999987654 5999999999886432111 35899999999998753211 1
Q ss_pred hhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCccc-CceEEe
Q 008066 189 TRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYL-KPFTTS 267 (579)
Q Consensus 189 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 267 (579)
...+.....+++++|||+.++ ....+++++|++|||||+|++.. .++||||||.|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 111222235689999999863 22458999999999999999965 689999999999999999998 899999
Q ss_pred EEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCC
Q 008066 268 VIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAP 320 (579)
Q Consensus 268 ~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~ 320 (579)
++.|+||||++|+++++ .||.|++|||......+...-..+..++|+|++..
T Consensus 227 tv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999999 69999999998655431111124678999998754
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.6e-52 Score=485.12 Aligned_cols=268 Identities=18% Similarity=0.241 Sum_probs=207.9
Q ss_pred cccCceEEEEEEEEEEeee--cCce--------------------------eeeEE-------EEcCC--------CCCC
Q 008066 30 FANAKAHHHDFVIQATPVK--RLCK--------------------------THNTI-------TVNGM--------YPGP 66 (579)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~--~~g~--------------------------~~~~~-------~~ng~--------~pgP 66 (579)
.+.+++|+|.+.|++..++ |.+. .+++. +||+. +|||
T Consensus 16 ~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP 95 (1065)
T 2j5w_A 16 PAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLGP 95 (1065)
T ss_dssp ----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCC
T ss_pred ccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcCC
Confidence 4457899999999998875 3322 23333 57877 8999
Q ss_pred eEEEecCCEEEEEEEeCCCCCceEEeCCccccC----CCCCCCCCc--ccccccCCCCeEEEEEEecCC---------Cc
Q 008066 67 TLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMR----TAWADGPEF--VTQCPIRPGMSYTYRFTIQGQ---------EG 131 (579)
Q Consensus 67 ~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~----~~~~DGv~~--~~~~~i~PG~~~~y~f~~~~~---------~G 131 (579)
+||+++||+|+|+|+|.|+++++|||||+++.. .+|.||+++ ++||+|+||++|+|+|++.++ +|
T Consensus 96 ~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aG 175 (1065)
T 2j5w_A 96 IIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCV 175 (1065)
T ss_dssp CEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEE
T ss_pred eEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCce
Confidence 999999999999999999999999999999874 467888888 899999999999999998544 49
Q ss_pred ceeeeecccccc---cceeeeEEEeCCCCCCCCCC-CCCCceeEEee------eeccCChHHHHHHhhhCCC----C---
Q 008066 132 TLWWHAHSSWLR---ATVYGALIIHPKEGSSYPFP-KPKRETPILLG------EWWDANPIDVVRQATRTGA----A--- 194 (579)
Q Consensus 132 t~~yH~h~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~----~--- 194 (579)
|||||||.+.++ +||+|+|||++++....|.+ ..|+|++|+++ +|+..+....+. ...+. .
T Consensus 176 T~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~~~~~ 253 (1065)
T 2j5w_A 176 TRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKDNEDF 253 (1065)
T ss_dssp EEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTTCHHH
T ss_pred EEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCccccccccccc
Confidence 999999999876 49999999999876443332 35789999999 455432111110 00000 0
Q ss_pred CCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCC-ccEEEEEcCCeeEEEeeCCcccCceEEeEEEECc
Q 008066 195 PNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLN-QPLFFTIANHQFTVVGADASYLKPFTTSVIMLGP 273 (579)
Q Consensus 195 ~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~p 273 (579)
...++.++|||+.+. ..+.+.+++|++|||||+|+|.. ..+.|||+||+|++ +|+.+|++.|+|
T Consensus 254 ~~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~p 318 (1065)
T 2j5w_A 254 QQSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFP 318 (1065)
T ss_dssp HHHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECB
T ss_pred cccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECC
Confidence 012357999999751 24679999999999999999976 68899999999992 578999999999
Q ss_pred ccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 274 GQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 274 G~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
|||+||+|++++ ||.|+|+||..... ..+..+++++.+...
T Consensus 319 Ger~dVlv~~~~-pG~y~i~~h~~~h~------~~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 319 ATLFDAYMVAQN-PGEWMLSCQNLNHL------KAGLQAFFQVQECNK 359 (1065)
T ss_dssp TCEEEEEEECCS-CEEEEEEECSHHHH------HTTCEEEEEEECSCC
T ss_pred CcEEEEEEEeCC-CeeEEEEecCcchh------hCCCEEEEEEecCCC
Confidence 999999999995 89999999976432 235688888876443
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=5.2e-52 Score=427.56 Aligned_cols=273 Identities=27% Similarity=0.478 Sum_probs=226.9
Q ss_pred ceEEEEEEEEEEeeecC-ceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccccc
Q 008066 34 KAHHHDFVIQATPVKRL-CKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQC 112 (579)
Q Consensus 34 ~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~ 112 (579)
++++|+|++++..++++ |.++.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999875 99999999999999999999999999999999999999999999999999899999999999
Q ss_pred ccCCCCeEEEEEEecCCCcceeeeecccc--cc--cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHh
Q 008066 113 PIRPGMSYTYRFTIQGQEGTLWWHAHSSW--LR--ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQA 188 (579)
Q Consensus 113 ~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~--~~--~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 188 (579)
+|+||++++|+|++ .++||||||||... +. .||+|+|||+++++...+ ...++|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999997 68999999999865 22 599999999987653211 134789999999998632110 0
Q ss_pred hhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCccc-CceEEe
Q 008066 189 TRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYL-KPFTTS 267 (579)
Q Consensus 189 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 267 (579)
...+.....+++++|||+.++ ....+++++|++|||||+|++. ..++||||||.|+||+.||.++ .|..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 011112224688999999763 2245899999999999999994 5889999999999999999998 589999
Q ss_pred EEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 268 VIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 268 ~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
++.|+||||++|+|+++ .||.|+++||....+........+..++++|++...
T Consensus 228 tv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~~ 280 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPV 280 (339)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSCC
T ss_pred EEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCCC
Confidence 99999999999999999 589999999976542211112345689999987543
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.5e-54 Score=485.71 Aligned_cols=241 Identities=17% Similarity=0.176 Sum_probs=184.4
Q ss_pred EEEEEEEEeeecC-ceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc--------
Q 008066 38 HDFVIQATPVKRL-CKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF-------- 108 (579)
Q Consensus 38 ~~l~~~~~~~~~~-g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~-------- 108 (579)
-.|+++++...+. |..+..|+ ++|||+||+++||+|+|+|+|.++++++|||||+++... +||+++
T Consensus 49 k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~ 123 (742)
T 2r7e_A 49 KTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQRE 123 (742)
T ss_dssp CCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSS
T ss_pred EEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCcccc
Confidence 3566666555544 56666664 899999999999999999999999999999999998653 666554
Q ss_pred ccccccCCCCeEEEEEEecC---------CCcceeeeeccccc--c-cceeeeEEEeCCCCCCCCCCCCCCceeEEeee-
Q 008066 109 VTQCPIRPGMSYTYRFTIQG---------QEGTLWWHAHSSWL--R-ATVYGALIIHPKEGSSYPFPKPKRETPILLGE- 175 (579)
Q Consensus 109 ~~~~~i~PG~~~~y~f~~~~---------~~Gt~~yH~h~~~~--~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d- 175 (579)
++||+|+||++|+|+|++.+ ++||||||||.+.. . .||+|+|||++++....+.....+|++|++++
T Consensus 124 vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~ 203 (742)
T 2r7e_A 124 KEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVF 203 (742)
T ss_dssp SSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECC
T ss_pred cccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecc
Confidence 89999999999999999843 46999999999874 3 39999999999875432222224888888764
Q ss_pred -----eccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCc-cEEEEEcCC
Q 008066 176 -----WWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQ-PLFFTIANH 249 (579)
Q Consensus 176 -----~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~l~gh 249 (579)
|+........... .........+.++|||+.+ | ..+.+++++|++|||||+|+|+.. .++||||||
T Consensus 204 de~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh 275 (742)
T 2r7e_A 204 DEGKSWHSETKNSLMQDR-DAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGH 275 (742)
T ss_dssp CCSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTC
T ss_pred cCCccccccccccccccC-CCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCC
Confidence 5544322111111 1111122356789999974 1 346789999999999999999775 789999999
Q ss_pred eeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCC
Q 008066 250 QFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASA 300 (579)
Q Consensus 250 ~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~ 300 (579)
.|+|++ ..+|++.|.||++++|.++++ .||.|++|||.....
T Consensus 276 ~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~~H~ 317 (742)
T 2r7e_A 276 TFLVRN--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHISSHQ 317 (742)
T ss_dssp CCEETT--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSSSSS
T ss_pred EEEEEe--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCChhHH
Confidence 999984 347899999999999999999 699999999976543
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.4e-49 Score=426.38 Aligned_cols=399 Identities=15% Similarity=0.111 Sum_probs=261.3
Q ss_pred ccCceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccc
Q 008066 31 ANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
+.+.++++.++++...+.++| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .+
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~ 88 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RS 88 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------EC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------cc
Confidence 345667777777665566555 456899999 999999999999999999998889999998642 25
Q ss_pred ccccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCC-----CCCCceeEEeeeeccCChHHH
Q 008066 111 QCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFP-----KPKRETPILLGEWWDANPIDV 184 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~-----~~~~e~~l~~~d~~~~~~~~~ 184 (579)
+|+|+||++++|.|++ .++||||||||..+++. ||.|.|+|+++....+... ....+++..+ |+.......+
T Consensus 89 ~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 89 AIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred ceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 7899999999999997 67999999999877775 9999999998765322100 0001111000 0000000000
Q ss_pred -H-----HHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCC-CccEEEEEcCCeeEEEeeC
Q 008066 185 -V-----RQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGL-NQPLFFTIANHQFTVVGAD 257 (579)
Q Consensus 185 -~-----~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~-~~~~~~~l~gh~~~via~D 257 (579)
+ ......| ...+.++|||+.- .|.+++++|++|||||+|.+. ...+++|+||. ++.|
T Consensus 167 ~l~~~~~~~~~~~g---~~~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 167 DLETVEVKGQLDDN---TTYTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEEETT---EEEEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEEeccCC---ceeEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 0 0000011 1235789999841 278999999999999999985 35567888874 3689
Q ss_pred CcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCC
Q 008066 258 ASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLP 337 (579)
Q Consensus 258 G~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p 337 (579)
|.+ +++.|.||||+++.++++ .+|+||+|||...... ....+..+.+.+..+.. +|
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~---~~~~Gl~g~l~v~~~~~-----------~P--- 286 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPT---HITNGMYGLLLVEPEGG-----------LP--- 286 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHH---HHHTTCEEEEEEECTTC-----------SC---
T ss_pred CCC------ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHH---HHhCCCEEEEEEeCCCC-----------CC---
Confidence 973 234599999999999999 5799999998521100 01124567777764321 11
Q ss_pred CCCCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhc
Q 008066 338 AFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAH 417 (579)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~ 417 (579)
..++.... ....-.. +... .......+.... .. ......|.+||+.+...
T Consensus 287 ~~d~~~~~-~~~~~~~---~~~~--~~~g~~~~~~~~-------------~~--~~~~~~~~iNG~~~~~~--------- 336 (447)
T 2dv6_A 287 QVDREFYV-MQGEIYT---VKSF--GTSGEQEMDYEK-------------LI--NEKPEYFLFNGSVGSLT--------- 336 (447)
T ss_dssp CCSEEEEE-EEEEECB---SSCT--TCCEECCBBHHH-------------HH--TTCCSEEEETTSTTCCC---------
T ss_pred CCCeeEEE-Eeccccc---CCcc--cccccccCChHH-------------hh--ccCCCEEEECCcccCCC---------
Confidence 11110000 0000000 0000 000000000000 00 00112345665433210
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCC
Q 008066 418 HHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFG 497 (579)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g 497 (579)
...++.++.|++++|+|.|.+ ....||||||||+|+||+...+
T Consensus 337 -----------------------------------~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~ 379 (447)
T 2dv6_A 337 -----------------------------------RSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGS 379 (447)
T ss_dssp -----------------------------------CCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGC
T ss_pred -----------------------------------CCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCc
Confidence 123578999999999999965 2568999999999999998532
Q ss_pred CCCCCCCCCCCCCCCCC-cceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCcc
Q 008066 498 NFNPKTDTSKFNLVDPP-LRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVT 564 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~p~-~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~ 564 (579)
. +..|. +|||+.|++|+++.|+|+++|||.|+||||+++|++.||+++|.|.+...
T Consensus 380 ~-----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 380 V-----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp S-----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred c-----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 1 12344 69999999999999999999999999999999999999999999976543
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=2.1e-47 Score=384.26 Aligned_cols=239 Identities=26% Similarity=0.332 Sum_probs=206.6
Q ss_pred cCceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccc
Q 008066 32 NAKAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
...+++|+|++++..+++ +|..+++|+|||++|||+||+++||+|+|+|+|.++.+++|||||++. .++||+|+++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 456789999999998876 489999999999999999999999999999999999999999999973 4699999999
Q ss_pred ccccCCCCeEEEEEEecCCCcceeeeecccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHH
Q 008066 111 QCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW---LR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVR 186 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 186 (579)
||+|+||++++|+|++ +++||||||||.+. +. +||+|+|||++++..+ ..++|++|+++||+..+
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC------
Confidence 9999999999999997 89999999999974 23 4999999999987532 34799999999998762
Q ss_pred HhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCc-cEEEEEcCCeeEEEeeCCcccCceE
Q 008066 187 QATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQ-PLFFTIANHQFTVVGADASYLKPFT 265 (579)
Q Consensus 187 ~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~l~gh~~~via~DG~~~~p~~ 265 (579)
| ..++.++|||+.+++ ....+++++|++|||||+|++... .++||||||.|+|++.++....|..
T Consensus 177 -----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~ 242 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEY 242 (288)
T ss_dssp -----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEE
T ss_pred -----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCce
Confidence 1 135789999997621 123589999999999999999654 6899999999999984443337799
Q ss_pred EeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 266 TSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 266 ~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
+|++.|+||||++|+++++ .||.|.++||....
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~~H 275 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFP-YPGKFMFHAHKTEF 275 (288)
T ss_dssp ESEEEEETTCEEEEEECCC-SCEEEEEECSSHHH
T ss_pred eeEEEeCCCceEEEEEECC-CCEEEEEEecChHH
Confidence 9999999999999999999 79999999997544
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.3e-47 Score=392.89 Aligned_cols=262 Identities=23% Similarity=0.283 Sum_probs=218.9
Q ss_pred cCceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC--CCceEEeCCccccCCCCCCCCCc
Q 008066 32 NAKAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR--YNVTIHWHGVRQMRTAWADGPEF 108 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DGv~~ 108 (579)
.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||.+.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 467789999999999997 799999999999999999999999999999999986 589999999852 688765
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeeeecccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHH
Q 008066 109 VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW---LR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDV 184 (579)
Q Consensus 109 ~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 184 (579)
.+ .|+||++++|+|++ +++||||||||.+. +. +||+|+|||++++. ++..|+|++++++||++......
T Consensus 110 ~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 110 AT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred ce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 33 59999999999997 78999999999753 23 49999999998753 33568999999999998652100
Q ss_pred -------HHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeC
Q 008066 185 -------VRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGAD 257 (579)
Q Consensus 185 -------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~D 257 (579)
..... + ..++.++|||+.+++.+| +.+++++|++|||||+|+|....+.|||+||+|+||+.|
T Consensus 183 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~~-----~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 183 QGLQPFDMDKAV--A---EQPEYVVFNGHVGALTGD-----NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp CEEECBCHHHHH--H---TCCSEEEETTSTTTTSGG-----GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccChhHhc--c---CCCceEEEcCcccCCCCc-----eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 00000 1 245799999998754322 569999999999999999998999999999999999999
Q ss_pred CcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 258 ASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 258 G~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
|.+++|..++++.|+||||+||+|+++ .||.|+|+||....+ ...+..++++|++...
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~-----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRA-----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHH-----HHSSCEEEEEEESCCC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEEEecccccc-----ccCCcEEEEEECCCCC
Confidence 999999999999999999999999999 589999999975432 1235789999987554
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.9e-46 Score=432.82 Aligned_cols=399 Identities=16% Similarity=0.147 Sum_probs=263.3
Q ss_pred eeeeEEEEcCCCCC--CeEEEecCCEEEEEEEeCCCCCceEEeCCccccC-CCCCCCCCcccccccCCCCeEEEEEEecC
Q 008066 52 KTHNTITVNGMYPG--PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMR-TAWADGPEFVTQCPIRPGMSYTYRFTIQG 128 (579)
Q Consensus 52 ~~~~~~~~ng~~pg--P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~-~~~~DGv~~~~~~~i~PG~~~~y~f~~~~ 128 (579)
..+.+.++||++|| |.|++++||+|+++|.|. .+.+||||+++.+ +.++||++.++ |+|.||.+++|.|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56789999999999 889999999999999976 4459999999999 88999999999 999999999999987 7
Q ss_pred CCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCCCCCCceeEEe----eeeccCChHHHHHHhh-hCCCCCCCCceEE
Q 008066 129 QEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFPKPKRETPILL----GEWWDANPIDVVRQAT-RTGAAPNISDAYT 202 (579)
Q Consensus 129 ~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~l 202 (579)
++||||||||...++. ||.|.++|++......++..++.|.++.+ .||++........... ..+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 9999999999988775 99999999988654445446678888888 8999877655433221 11221 22233
Q ss_pred EcCCCCC----------------CCCC----------CCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEee
Q 008066 203 INGQPGD----------------LYNC----------SSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGA 256 (579)
Q Consensus 203 iNG~~~~----------------~~~~----------~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~ 256 (579)
+|+.... .+.- ..-..|.+++++|+++++||.|.. ...+++|.||.. +...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HGl~--~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ--TESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESSCB--CSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeecccc--ccCC
Confidence 3332110 0000 022458999999999999999997 455577877743 3322
Q ss_pred CCcccCceEEeEEEECcccEEEEEEEcCCC---------CcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCC
Q 008066 257 DASYLKPFTTSVIMLGPGQTTDVLIKGDQP---------PSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGL 327 (579)
Q Consensus 257 DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~---------~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~ 327 (579)
| ...+.||++++..+.+.+. +|.||+|+|.....+ ...+..+.|.......
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q----~~~GL~G~liV~~~~~------ 904 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD----LYSGLIGPLIVCRRPY------ 904 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH----HHTTCEEEEEEECCC-------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh----hhccccceeEecCccc------
Confidence 2 1246799998888887642 258999988432100 0123445455543221
Q ss_pred CCCCCCCCCCCCCCccchhhcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeec
Q 008066 328 SIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVL 407 (579)
Q Consensus 328 ~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~ 407 (579)
.. +. ..+...+..+.+.. +.. +..-+ ...|+.+|..
T Consensus 905 l~----~~-----------------------~~~~d~D~~l~~~~-~d~---------------~~~~y-~~~n~~~~~~ 940 (1065)
T 2j5w_A 905 LK----VF-----------------------NPRRKLEFALLFLV-FDE---------------NESWY-LDDNIKTYSD 940 (1065)
T ss_dssp -------------------------------CCCCEEEEEEEEEE-EEG---------------GGSTT-HHHHHHHHCS
T ss_pred cc----cc-----------------------CCCcceEEEEEEEe-ecC---------------Cccee-eccCcccccC
Confidence 00 00 00011111111110 000 00000 0112222210
Q ss_pred -C-CchhhhhhcccCCCCcccCCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeee
Q 008066 408 -P-SNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIH 485 (579)
Q Consensus 408 -p-~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlH 485 (579)
| .. +++...+.. .+..+..+|. .......+.++.|++|+|+|.|.+. ..+.||||||
T Consensus 941 ~P~~v-~~~~~~~~~------------~~~~~~iNG~-------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlH 999 (1065)
T 2j5w_A 941 HPEKV-NKDDEEFIE------------SNKMHAINGR-------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFH 999 (1065)
T ss_dssp CGGGC-CTTCHHHHH------------HTEEEEETTB-------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEES
T ss_pred Ccccc-Ccchhhhhc------------cCceEEECCc-------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEc
Confidence 0 00 011000000 0000111111 0112456789999999999999641 3578999999
Q ss_pred ccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCc
Q 008066 486 GYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 486 G~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
||.|+|++++ |.+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|.|.+..
T Consensus 1000 G~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1000 GHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp SCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred ccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 9999998652 779999999999999999999999999999999999999999999998754
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.1e-44 Score=362.25 Aligned_cols=239 Identities=18% Similarity=0.267 Sum_probs=200.5
Q ss_pred ccCceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccc
Q 008066 31 ANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
+.+.+|+|+|+|++.. .+...+.++++||++|||+||+++||+|+|+|+|.++.+++|||||+++.. ++||++ ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CC
Confidence 4678999999999864 344455677899999999999999999999999999999999999999876 499999 89
Q ss_pred ccccCCCCeEEEEEEecC------------CCcceeeeecccc------cc-cceeeeEEEeCCCCCCCCCCCCCCceeE
Q 008066 111 QCPIRPGMSYTYRFTIQG------------QEGTLWWHAHSSW------LR-ATVYGALIIHPKEGSSYPFPKPKRETPI 171 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~------------~~Gt~~yH~h~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l 171 (579)
||+|+||++++|+|++.+ ++||||||||.++ +. +||+|+|||+++++.. .|+|++|
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceEE
Confidence 999999999999999843 3799999999865 22 3999999999987532 3899999
Q ss_pred EeeeeccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCee
Q 008066 172 LLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQF 251 (579)
Q Consensus 172 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~ 251 (579)
++++ ++|||+.++ ..+.++++.|++|||||+|.+. ..++||||||.|
T Consensus 153 ~l~~-------------------------~~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f 199 (276)
T 3kw8_A 153 VFND-------------------------MTINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 199 (276)
T ss_dssp EEET-------------------------TEETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Eecc-------------------------cccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEcccee
Confidence 8865 389999752 4578999999999999999996 578999999999
Q ss_pred EEEeeCCccc----CceEEeEEEECcccEEEEEEEcCC--CCcceEEEEEeccCCCCCCCCCcceEEEEEeccC
Q 008066 252 TVVGADASYL----KPFTTSVIMLGPGQTTDVLIKGDQ--PPSRYYLAARAYASAPNAPFDNTTTTAILEYKSA 319 (579)
Q Consensus 252 ~via~DG~~~----~p~~~d~l~l~pG~R~dv~v~~~~--~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~ 319 (579)
.+++ ||... .+..+|++.|.||+++++.+++++ .||.|++|||..... ..+..+.+++...
T Consensus 200 ~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~------~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 200 ADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS------DMGMVGLFLVKKP 266 (276)
T ss_dssp ESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH------HTTCEEEEEEECT
T ss_pred EEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHh------hCCCeEEEEEeCC
Confidence 9875 77543 356899999999999999999985 689999999975432 2356677777654
No 27
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.6e-44 Score=367.43 Aligned_cols=242 Identities=18% Similarity=0.291 Sum_probs=201.5
Q ss_pred ccccCceEEEEEEEEEEeeecCc-eeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCC
Q 008066 29 SFANAKAHHHDFVIQATPVKRLC-KTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPE 107 (579)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~ 107 (579)
+.+.+.+++++|.+++. ++| ..+.++..||++|||+||+++||+|+|+|+|+++++++|||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 34567889999987643 455 4456677899999999999999999999999999999999999998764 99997
Q ss_pred cccccccCCCCeEEEEEEec------------CCCcceeeeecccccc-------cceeeeEEEeCCCCCCCCCCCCCCc
Q 008066 108 FVTQCPIRPGMSYTYRFTIQ------------GQEGTLWWHAHSSWLR-------ATVYGALIIHPKEGSSYPFPKPKRE 168 (579)
Q Consensus 108 ~~~~~~i~PG~~~~y~f~~~------------~~~Gt~~yH~h~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 168 (579)
++||+|+||++++|+|++. .++||||||||..++. .||+|+|||+++.+. .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5899999999999999862 3679999999986542 399999999998753 34899
Q ss_pred eeEEeeeeccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcC
Q 008066 169 TPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIAN 248 (579)
Q Consensus 169 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~g 248 (579)
++|+++|| ++||+..+ ..+.+.++.|++|||||+|++ ...++|||||
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHG-EYYHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEES-SCCEEEEETT
T ss_pred ceeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEeccc-ccceeeeecC
Confidence 99999886 45666542 336799999999999999999 5678999999
Q ss_pred CeeEEEeeCCccc---CceEEeEEEECcccEEEEEEEcCC--CCcceEEEEEeccCCCCCCCCCcceEEEEEeccCC
Q 008066 249 HQFTVVGADASYL---KPFTTSVIMLGPGQTTDVLIKGDQ--PPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAP 320 (579)
Q Consensus 249 h~~~via~DG~~~---~p~~~d~l~l~pG~R~dv~v~~~~--~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~ 320 (579)
|.|++++.||... .|..+|++.|.||||++++|.+.. .||.|++|||..... ..+..+++.++...
T Consensus 203 h~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~------~~GM~~~f~V~~~d 273 (313)
T 3tas_A 203 HRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS------DMGMVGLFLVKKPD 273 (313)
T ss_dssp CCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH------HTTCEEEEEEECTT
T ss_pred CeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH------HCCCeEEEEEECCC
Confidence 9999999998765 478899999999999999998764 589999999975433 23567777776543
No 28
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=7e-44 Score=381.22 Aligned_cols=264 Identities=19% Similarity=0.255 Sum_probs=219.1
Q ss_pred ccCceEEEEEEEEEEeee-cCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC--CCceEEeCCccccCCCCCCCCC
Q 008066 31 ANAKAHHHDFVIQATPVK-RLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR--YNVTIHWHGVRQMRTAWADGPE 107 (579)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DGv~ 107 (579)
+.+.+++|+|++++..++ .+|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||.+
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 456789999999999998 5899999999999999999999999999999999986 499999999863 67876
Q ss_pred cccccccCCCCeEEEEEEecCCCcceeeeecccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHH
Q 008066 108 FVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW---LR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPID 183 (579)
Q Consensus 108 ~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 183 (579)
..+ +|+||++++|+|++ +++||||||||.+. +. +||+|+|||++++. .+..|+|++|+++||+......
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~----~~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG----LAPVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC----CCCCCceEEEEeeeeeccCccc
Confidence 543 69999999999997 78999999998542 33 49999999998754 2355899999999999875310
Q ss_pred H-----H-HHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeC
Q 008066 184 V-----V-RQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGAD 257 (579)
Q Consensus 184 ~-----~-~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~D 257 (579)
. . ...+ . ...+++++|||+.++.. ..+.+++++|++|||||+|+|....+.|||+||+|+||+.|
T Consensus 172 ~~~~~~~~~~~~-~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 172 EAGLQPFDMAKA-I---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp CCEEECBCHHHH-H---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccCChhHh-c---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 0 0 0001 1 13568999999976321 12579999999999999999988999999999999999999
Q ss_pred CcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 258 ASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 258 G~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
|.+++|..++++.|.||||+||+|+++ .+|.|+++|+.+... ......++++|.+...
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~-----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRA-----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHH-----HTTSCEEEEEEESCCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccc-----cccCceEEEEecCCCC
Confidence 999999999999999999999999999 589999999975432 1345789999987553
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=3e-44 Score=362.53 Aligned_cols=242 Identities=19% Similarity=0.286 Sum_probs=197.9
Q ss_pred cccCceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcc
Q 008066 30 FANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFV 109 (579)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 109 (579)
.+.+.+++|+|.+++..-. ...+.++.+||++|||+||+++||+|+|+|+|++++++||||||+.+.+. +||++ +
T Consensus 24 ~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~ 98 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDE--LYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-M 98 (299)
T ss_dssp ---CCEEEEEEEEEEEETT--EEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred ccCCCEEEEEEEEEecCCC--ceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-c
Confidence 4577889999999976422 24455667799999999999999999999999999999999999998754 99996 8
Q ss_pred cccccCCCCeEEEEEEec------------CCCcceeeeecccccc-------cceeeeEEEeCCCCCCCCCCCCCCcee
Q 008066 110 TQCPIRPGMSYTYRFTIQ------------GQEGTLWWHAHSSWLR-------ATVYGALIIHPKEGSSYPFPKPKRETP 170 (579)
Q Consensus 110 ~~~~i~PG~~~~y~f~~~------------~~~Gt~~yH~h~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~ 170 (579)
+||+|+||++++|+|+++ .++||||||||..++. .||+|+|||+++.+. .+|+|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999873 3689999999986643 299999999988753 3489999
Q ss_pred EEeeeeccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCe
Q 008066 171 ILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQ 250 (579)
Q Consensus 171 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~ 250 (579)
|++++| .+||+.. ...+.+.++.||+|||||+|++. ..++||||||.
T Consensus 174 l~~~~~-------------------------~~Ng~~~-------~~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~ 220 (299)
T 3t9w_A 174 VVFNDM-------------------------MINNRAH-------HDAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHR 220 (299)
T ss_dssp EEEETT-------------------------EETTCCT-------TCCCEEEEETTCEEEEEEEEESS-CCCEEEETTCC
T ss_pred eeeeee-------------------------eecCccc-------cccccceecCCCEEEEEEEeccc-cceeeeEecce
Confidence 998764 4777765 24578999999999999999995 55799999999
Q ss_pred eEEEeeCCccc---CceEEeEEEECcccEEEEEEEcCC--CCcceEEEEEeccCCCCCCCCCcceEEEEEeccCC
Q 008066 251 FTVVGADASYL---KPFTTSVIMLGPGQTTDVLIKGDQ--PPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAP 320 (579)
Q Consensus 251 ~~via~DG~~~---~p~~~d~l~l~pG~R~dv~v~~~~--~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~ 320 (579)
|.++..|+... .+..+|++.|.||||++++|.+.+ .||.|++|||..... ..+..+++...+..
T Consensus 221 F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~------~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 221 WLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHS------DMGMAGMFLVRNAD 289 (299)
T ss_dssp EESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHH------HTTCEEEEEEECTT
T ss_pred EEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHH------hcCCeEEEEEECCC
Confidence 99999988765 345789999999999999997653 589999999975433 23456777766543
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=4.5e-43 Score=360.81 Aligned_cols=270 Identities=17% Similarity=0.158 Sum_probs=209.3
Q ss_pred cccCceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc
Q 008066 30 FANAKAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF 108 (579)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~ 108 (579)
.+.+.+++|+|++++..+++ +|..+++|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 45668899999999999886 5999999999999999999999999999999999 5789999999876544555556
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeeeecccc-----cc-cceeeeEEEeCCCCCCCCC---CCCCCceeEEeeeeccC
Q 008066 109 VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW-----LR-ATVYGALIIHPKEGSSYPF---PKPKRETPILLGEWWDA 179 (579)
Q Consensus 109 ~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~-----~~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~ 179 (579)
++ .|+||++++|+|++ +++||||||||.++ +. +||+|+|||+++++.+.+. ...|+|++|+++||+..
T Consensus 104 ~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 104 LT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred ee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 65 49999999999997 78999999999974 44 3999999999875422111 14488999999999883
Q ss_pred --ChH---------HHHHH--hhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEE
Q 008066 180 --NPI---------DVVRQ--ATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTI 246 (579)
Q Consensus 180 --~~~---------~~~~~--~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l 246 (579)
... ..+.. ....+ ..++.++|||+.+++. ..+.+++++|+++|||++|.+....+ ..+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i 251 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAVMDT---LIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLI 251 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHHHTT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEE
T ss_pred ccccccccccccccccccchhHHhhc---cCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEE
Confidence 111 01000 00112 3568999999986321 13669999999988877766533332 347
Q ss_pred cCCeeEEEeeCCcccC-ce-EEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 247 ANHQFTVVGADASYLK-PF-TTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 247 ~gh~~~via~DG~~~~-p~-~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
++|.|+|++ ||.+++ |. .+|++.|.||||+||+|+++ .||+|+++||.+... ...+..++++|.+...
T Consensus 252 ~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~-----~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 252 GGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEA-----VHKGATAHVLVEGEWD 321 (333)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHH-----HTTCCEEEEEEESCCC
T ss_pred CCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhH-----hhCCCEEEEEEcCCCC
Confidence 899999999 999984 44 58999999999999999999 589999999976432 0245789999987544
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2.7e-42 Score=355.63 Aligned_cols=269 Identities=22% Similarity=0.239 Sum_probs=202.6
Q ss_pred cCceEEEEEEEEEEeee--cCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcc
Q 008066 32 NAKAHHHDFVIQATPVK--RLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFV 109 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 109 (579)
.+.+++|+|++++..++ +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 55779999999998876 5699999999999999999999999999999999974 345555555544456676666
Q ss_pred cccccCCCCeEEEEEEecCCCcceeeeeccccc----c-cceeeeEEEeCCCCCCCCC---CCCCCceeEEeeeeccCCh
Q 008066 110 TQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWL----R-ATVYGALIIHPKEGSSYPF---PKPKRETPILLGEWWDANP 181 (579)
Q Consensus 110 ~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~----~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~~ 181 (579)
++ |+||++++|+|++ +++||||||||.++. . +||+|+|||+++++...+. ...|+|++|+++||++...
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 64 9999999999997 789999999998753 3 4999999999876422111 1358899999999987411
Q ss_pred --HH---------HHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEE-EEcCC
Q 008066 182 --ID---------VVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFF-TIANH 249 (579)
Q Consensus 182 --~~---------~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~-~l~gh 249 (579)
.. .....+.. .....+++++|||+.+++.+ .+.+++++|++||| +|++....+.+ +|+||
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~-----~~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTG-----ANALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSG-----GGCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred cCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCC-----CcceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 00 00000000 00134589999999864321 26799999997775 56665555544 46999
Q ss_pred eeEEEeeCCcccCce--EEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 250 QFTVVGADASYLKPF--TTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 250 ~~~via~DG~~~~p~--~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
.|+|++ ||.+++|. .++++.|++|||+||+|++++ ||.|+++||..... ...+..++++|.+...
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~-----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA-----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH-----HTTSCEEEEEEESCCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc-----ccCCCeEEEEECCCCC
Confidence 999998 99998553 468999999999999999994 89999999975322 1245789999987554
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2.3e-41 Score=349.26 Aligned_cols=270 Identities=16% Similarity=0.219 Sum_probs=204.6
Q ss_pred ccCceEEEEEEEEEEeee--cCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc
Q 008066 31 ANAKAHHHDFVIQATPVK--RLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF 108 (579)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~ 108 (579)
+.+.+++|+|++++..++ +||..+++|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||...
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 356789999999999887 459999999999999999999999999999999998 778999988766533444444
Q ss_pred ccccccCCCCeEEEEEEecCCCcceeeeecccc----cc-cceeeeEEEeCCCCCC----CCCCCCCCceeEEeeeeccC
Q 008066 109 VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW----LR-ATVYGALIIHPKEGSS----YPFPKPKRETPILLGEWWDA 179 (579)
Q Consensus 109 ~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 179 (579)
++ .|+||++++|+|++ .++||||||||.++ +. +||+|+|||+++++.. .+. ..|+|++|+++||+..
T Consensus 111 ~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 111 LT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred ce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 55 49999999999998 68999999999874 33 4999999999875311 121 3588999999999873
Q ss_pred --ChH---------HHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcC
Q 008066 180 --NPI---------DVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIAN 248 (579)
Q Consensus 180 --~~~---------~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~g 248 (579)
... ......... .....++.++|||+.++. ...+.+++++|+++||+++|.+.... ..+++|
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~g 259 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQANRDTR-PHLIGG 259 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBC-EEEETC
T ss_pred cccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCCCccc-eEEecC
Confidence 111 011100000 001245799999998632 11377999999988877666553332 446899
Q ss_pred CeeEEEeeCCccc-Cce-EEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 249 HQFTVVGADASYL-KPF-TTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 249 h~~~via~DG~~~-~p~-~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
|.|+|++ ||.++ .|. .++++.|.||||+||+|++++ ||+|+++||..... ...+..++++|.+...
T Consensus 260 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h-----~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 260 HGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA-----FELGAAGHFKVTGEWN 327 (340)
T ss_dssp CEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH-----HTTSCEEEEEEESCCC
T ss_pred cceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH-----HhCCCEEEEEECCCCc
Confidence 9999997 99988 453 589999999999999999995 89999999976311 1235678999987554
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=4.7e-41 Score=345.43 Aligned_cols=238 Identities=18% Similarity=0.262 Sum_probs=193.3
Q ss_pred cCceEEEEEEEEEEeeecCceeee-EEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccc
Q 008066 32 NAKAHHHDFVIQATPVKRLCKTHN-TITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
.+.+++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+.+.. ++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cc
Confidence 45679999999975 3453221 22358999999999999999999999999999999999999873 599998 89
Q ss_pred ccccCCCCeEEEEEEecC------------CCcceeeeecccc------cc-cceeeeEEEeCCCCCCCCCCCCCCceeE
Q 008066 111 QCPIRPGMSYTYRFTIQG------------QEGTLWWHAHSSW------LR-ATVYGALIIHPKEGSSYPFPKPKRETPI 171 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~------------~~Gt~~yH~h~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l 171 (579)
||+|+||++++|+|++.. ++|+||||||..+ +. .||+|+|||+++++. .+|+|++|
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEE
Confidence 999999999999998732 3599999999743 23 399999999988653 24789999
Q ss_pred EeeeeccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCee
Q 008066 172 LLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQF 251 (579)
Q Consensus 172 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~ 251 (579)
+++|| +|||+.++ ..+.+.++.||+|||||+|.+. ..++||||||.|
T Consensus 194 ~~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f 240 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 240 (343)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Ecccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEE
Confidence 88764 79998742 3467999999999999999995 678999999999
Q ss_pred EEEeeCCcccC----ceEEeEEEECcccEEEEEEEcC--CCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCC
Q 008066 252 TVVGADASYLK----PFTTSVIMLGPGQTTDVLIKGD--QPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAP 320 (579)
Q Consensus 252 ~via~DG~~~~----p~~~d~l~l~pG~R~dv~v~~~--~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~ 320 (579)
+++ .||.... +..+|++.|.|||+++++++++ +.||.|++|||..... ..+..+++++....
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~------~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS------DMGMVGLFLVKKPD 308 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH------HTTCEEEEEEECTT
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHH------hccCcEEEEEecCC
Confidence 997 4675442 4678999999999999999984 3789999999975432 23567788887543
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=5.6e-40 Score=366.45 Aligned_cols=264 Identities=16% Similarity=0.161 Sum_probs=191.3
Q ss_pred cCceEEEEEEEEEEeeecC-------------c-eeee--EEEE----------------cCCCCCCeEEEecCCEEEEE
Q 008066 32 NAKAHHHDFVIQATPVKRL-------------C-KTHN--TITV----------------NGMYPGPTLEVNNGDTLVVK 79 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~--~~~~----------------ng~~pgP~i~v~~Gd~v~v~ 79 (579)
.+.+|+|.+.|++..+.-. | +..+ +..| ++++|||+||+++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4678999999999887632 2 1112 2233 44789999999999999999
Q ss_pred EEeCCCCCceEEeCCccccCCCCCCCCCccc--------ccccCCCCeEEEEEEecCC-----Cc----ceeeeeccccc
Q 008066 80 VTNKARYNVTIHWHGVRQMRTAWADGPEFVT--------QCPIRPGMSYTYRFTIQGQ-----EG----TLWWHAHSSWL 142 (579)
Q Consensus 80 l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~--------~~~i~PG~~~~y~f~~~~~-----~G----t~~yH~h~~~~ 142 (579)
|+|.++++++|||||+++.. ++||+|+++ ||+|+||++++|+|+++++ +| |||||||.+..
T Consensus 83 ~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 99999999999999999875 499999876 9999999999999998554 57 99999999643
Q ss_pred --c-cceeeeEEEeCCCCCCC--CCCCCCCceeEEee------eeccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCC
Q 008066 143 --R-ATVYGALIIHPKEGSSY--PFPKPKRETPILLG------EWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLY 211 (579)
Q Consensus 143 --~-~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~ 211 (579)
. +||+|+|||++++.... ..+..++|++|+++ ||+.+........... ......+++++|||+.++
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~iNG~~~~-- 237 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS-SEVKNSHEFHAINGMIYN-- 237 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSSC--
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-cchhhcCceeccCCEecC--
Confidence 3 39999999999865321 12334689999999 6777643321000011 111234689999999752
Q ss_pred CCCCCCeeeEEEecCCEEEEEEeecCCCc-cEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcce
Q 008066 212 NCSSQDTVVVPIDSGETNLLRVINSGLNQ-PLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRY 290 (579)
Q Consensus 212 ~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~ 290 (579)
.+.+++++|++|||||+|++... .++||||||.|++++.|| ..+|++.|+||||+||+|+++ .||.|
T Consensus 238 ------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG~w 305 (647)
T 1sdd_B 238 ------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPGWW 305 (647)
T ss_dssp ------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSEEE
T ss_pred ------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cceEe
Confidence 26799999999999999999764 889999999999999886 478999999999999999999 58999
Q ss_pred EEEEEeccCCCCCCCCCcceEEEEEecc
Q 008066 291 YLAARAYASAPNAPFDNTTTTAILEYKS 318 (579)
Q Consensus 291 ~l~~~~~~~~~~~~~~~~~~~~il~y~~ 318 (579)
++|||...... .+..+++.+..
T Consensus 306 ~~hch~~~h~~------~Gm~~~~~V~~ 327 (647)
T 1sdd_B 306 LLDTEVGEIQR------AGMQTPFLIVD 327 (647)
T ss_dssp EEECCCHHHHT------TTCEEEEEEEC
T ss_pred ecccCcccccc------cccccceeeec
Confidence 99999754332 34556666643
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.5e-38 Score=340.80 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=210.1
Q ss_pred CceEEEEEEEEEEeeec-CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC--CCceEEeCCccccCCCCCCCCCcc
Q 008066 33 AKAHHHDFVIQATPVKR-LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR--YNVTIHWHGVRQMRTAWADGPEFV 109 (579)
Q Consensus 33 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DGv~~~ 109 (579)
+.++.|+|++.+....+ +|....+|+|||++|||+|++++||+++|||.|.+. ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 35668888887777665 688899999999999999999999999999999985 579999999752 6898765
Q ss_pred cccccCCCCeEEEEEEecCCCcceeeeecccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHH-
Q 008066 110 TQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW---LR-ATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDV- 184 (579)
Q Consensus 110 ~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~- 184 (579)
+ .|.||++++|.|++ +++|+||||||.+. +. .||+|+|+|+++.. ++..++|+++++++|+.......
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 4 49999999999997 68999999999742 22 49999999998753 23568899999999987532100
Q ss_pred ------HHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCC
Q 008066 185 ------VRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADA 258 (579)
Q Consensus 185 ------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG 258 (579)
..... + ..++.++|||+.+++.. ...+.+++|++|||||+|++....++||||||+|+||+.||
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 00011 1 23578999999875321 24699999999999999999888999999999999999999
Q ss_pred cccC-ce-EEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCC
Q 008066 259 SYLK-PF-TTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC 321 (579)
Q Consensus 259 ~~~~-p~-~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~ 321 (579)
.++. |. .+|++.|.||||++|+|+++ .||.|++|||..... ..+..++++|.+...
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~------~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRL------EHGLVGFLNVDGPKN 436 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGG------GGTCCEEEEECSCSC
T ss_pred cccCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCcc------ccCCEEEEEEeCCCC
Confidence 9984 44 68999999999999999999 589999999976442 245689999986543
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.6e-41 Score=342.86 Aligned_cols=217 Identities=18% Similarity=0.223 Sum_probs=158.4
Q ss_pred eEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCC----CCCCCCCccc--ccccCCCCeEEEEEEecC
Q 008066 55 NTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRT----AWADGPEFVT--QCPIRPGMSYTYRFTIQG 128 (579)
Q Consensus 55 ~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~----~~~DGv~~~~--~~~i~PG~~~~y~f~~~~ 128 (579)
..+++| ++|||+||+++||+|+|+|+|.++++++|||||+++... ++.||+++++ ||+|+||++++|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 345578 589999999999999999999999999999999996543 3334443344 799999999999999854
Q ss_pred C---------Ccceeeeecccccc---cceeeeEEEeCCCCCCC-CC-CCCCCceeEEeeeeccCChHHHHHHhhhCCCC
Q 008066 129 Q---------EGTLWWHAHSSWLR---ATVYGALIIHPKEGSSY-PF-PKPKRETPILLGEWWDANPIDVVRQATRTGAA 194 (579)
Q Consensus 129 ~---------~Gt~~yH~h~~~~~---~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~ 194 (579)
+ +||||||||....+ .||+|+|||+++.+... +. ...|+|++|+++||..... . .
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~---------~--~ 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS---------W--N 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS---------S--S
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc---------c--c
Confidence 4 37999999987633 39999999998753211 11 1357899999999843210 0 0
Q ss_pred CCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCC-ccEEEEEcCCeeEEEeeCCcccCceEEeEEEECc
Q 008066 195 PNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLN-QPLFFTIANHQFTVVGADASYLKPFTTSVIMLGP 273 (579)
Q Consensus 195 ~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~p 273 (579)
...++.++|||+.+. ..+.+++++|+++||||+|++.. ..++||||||.|.+ || ..+|++.|.|
T Consensus 198 ~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~p 262 (306)
T 1sdd_A 198 QTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVS 262 (306)
T ss_dssp CCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEET
T ss_pred cCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECC
Confidence 123578999999752 23678999999999999999976 56789999999985 77 4589999999
Q ss_pred ccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 274 GQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 274 G~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
|||++|+|+++ .||.|+++||....
T Consensus 263 ger~~v~~~~~-~pG~~~~hch~~~H 287 (306)
T 1sdd_A 263 ATSTTANMTVS-PEGRWTIASLIPRH 287 (306)
T ss_dssp TCCBC---------CCCCCBCCSTTT
T ss_pred CcEEEEEEEcC-CCeEEEEEeCChHH
Confidence 99999999998 68999999997543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=6.7e-40 Score=367.73 Aligned_cols=249 Identities=13% Similarity=0.108 Sum_probs=195.8
Q ss_pred cCceEEEEEEEEEEee--ecCce---------------eeeE--EEE-----cC-----------CCCCCeEEEecCCEE
Q 008066 32 NAKAHHHDFVIQATPV--KRLCK---------------THNT--ITV-----NG-----------MYPGPTLEVNNGDTL 76 (579)
Q Consensus 32 ~~~~~~~~l~~~~~~~--~~~g~---------------~~~~--~~~-----ng-----------~~pgP~i~v~~Gd~v 76 (579)
.+.+|+|.|.|++..+ +|+|. .+++ +.| ++ ++|||+||+++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5789999999999885 56653 1222 222 22 589999999999999
Q ss_pred EEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecC---------CCcceeeeecccccc---c
Q 008066 77 VVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQG---------QEGTLWWHAHSSWLR---A 144 (579)
Q Consensus 77 ~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~---------~~Gt~~yH~h~~~~~---~ 144 (579)
+|+|+|.++.+++|||||+++..... ||+++ +||+|+||++|+|+|++.+ ++||||||||.+... .
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999988742 69988 8999999999999999854 899999999998743 3
Q ss_pred ceeeeEEEeCCCCCCC--CCCCCCCceeEEeee------eccCChHHHHHHhhh-CC----C---CCCCCceEEEcCCCC
Q 008066 145 TVYGALIIHPKEGSSY--PFPKPKRETPILLGE------WWDANPIDVVRQATR-TG----A---APNISDAYTINGQPG 208 (579)
Q Consensus 145 Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g----~---~~~~~~~~liNG~~~ 208 (579)
||+|+|||+++..... ..+..++|++|++++ ||.+.... .... .. . .....+.++|||+.+
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCccC
Confidence 9999999999865321 112457899888754 54432110 0000 00 0 011245789999975
Q ss_pred CCCCCCCCCeeeEEEecCCEEEEEEeecCCC-ccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCC
Q 008066 209 DLYNCSSQDTVVVPIDSGETNLLRVINSGLN-QPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPP 287 (579)
Q Consensus 209 ~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~ 287 (579)
...+.+.+++|++|||||+|++.. ..++||||||.|+|++.||. .+|++.|.||||++|+|+++ .|
T Consensus 365 -------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~p 431 (770)
T 2r7e_B 365 -------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KA 431 (770)
T ss_dssp -------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SC
T ss_pred -------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CC
Confidence 134678999999999999999965 47899999999999999973 88999999999999999999 68
Q ss_pred cceEEEEEecc
Q 008066 288 SRYYLAARAYA 298 (579)
Q Consensus 288 g~~~l~~~~~~ 298 (579)
|.|++|||...
T Consensus 432 G~w~~hcH~~~ 442 (770)
T 2r7e_B 432 GIWRVECLIGE 442 (770)
T ss_dssp BCCCBCCCSHH
T ss_pred CceEEEecccc
Confidence 99999999753
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=7.5e-37 Score=342.61 Aligned_cols=217 Identities=20% Similarity=0.275 Sum_probs=169.1
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCC-----CCCcccccccCCCCeEEEEEEecCCCc-----
Q 008066 62 MYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWAD-----GPEFVTQCPIRPGMSYTYRFTIQGQEG----- 131 (579)
Q Consensus 62 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~D-----Gv~~~~~~~i~PG~~~~y~f~~~~~~G----- 131 (579)
.+|||+||+++||+|+|+|+|.++.+++|||||+.+. ..|+| |+++++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999975 44565 567788999999999999999965544
Q ss_pred ----ceeeeecccccc---cceeeeEEEeCCCCCC-CC-CCCCCCceeEEeee------eccCChHHHHHHhhh-CCCC-
Q 008066 132 ----TLWWHAHSSWLR---ATVYGALIIHPKEGSS-YP-FPKPKRETPILLGE------WWDANPIDVVRQATR-TGAA- 194 (579)
Q Consensus 132 ----t~~yH~h~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g~~- 194 (579)
|||||||.+.++ .||+|+|||+++.+.. .. ....|+|++|++++ |+..... ..... ....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 999999998764 3999999999885321 11 12458999999965 5442211 11110 0000
Q ss_pred ------CCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCC-ccEEEEEcCCeeEEEeeCCcccCceEEe
Q 008066 195 ------PNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLN-QPLFFTIANHQFTVVGADASYLKPFTTS 267 (579)
Q Consensus 195 ------~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~l~gh~~~via~DG~~~~p~~~d 267 (579)
......++|||+.+. ..+ +.+++|++|||||+|+|+. ..++||||||+|+|+ +..+|
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~-------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~D 667 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD-------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYED 667 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS-------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBC
T ss_pred cccccccccCceeeecCcCCC-------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cccee
Confidence 001135789999752 113 8999999999999998764 467999999999986 56789
Q ss_pred EEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 268 VIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 268 ~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
++.|.||||++|+|+++ .||.|++|||....
T Consensus 668 tv~l~Pg~~~~v~~~ad-~pG~w~~hcH~~~H 698 (742)
T 2r7e_A 668 TLTLFPFSGETVFMSME-NPGLWILGCHNSDF 698 (742)
T ss_dssp SSCCCCCSSEECCEECC-CCCCSCCEECCCST
T ss_pred EEEECCCcEEEEEEEcC-CCeEEEEEeCCchH
Confidence 99999999999999999 68999999997654
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=2.6e-29 Score=252.46 Aligned_cols=234 Identities=17% Similarity=0.176 Sum_probs=165.4
Q ss_pred CceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEE
Q 008066 198 SDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTT 277 (579)
Q Consensus 198 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~ 277 (579)
...+++||+.- .|.+++++|++++++|.|.... .+++|+||.. ..+.||.+. .+...|.||+++
T Consensus 54 ~~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRIP---------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCccC---------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 35799999852 3789999999999999999854 5589999976 458899854 234578999999
Q ss_pred EEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCC
Q 008066 278 DVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQK 357 (579)
Q Consensus 278 dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p 357 (579)
++.++++ .+|.||+|||...... . ...+..+.+..+.+.. .+
T Consensus 118 ~y~f~~~-~~Gt~~yH~H~~~~~~-~--~~~Gl~G~liV~~~~~--------------~~-------------------- 159 (288)
T 3gdc_A 118 TYEFDAT-PFGTHLYHCHQSPLAP-H--IAKGLYGGFIVEPKEG--------------RP-------------------- 159 (288)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHH-H--HHTTCEEEEEEECSSC--------------CC--------------------
T ss_pred EEEEEcC-CCccEEEEecCcchHH-H--HhCcCeEEEEEeCCcc--------------CC--------------------
Confidence 9999997 7999999999632000 0 1123455555543221 00
Q ss_pred CCCCCCCceeEEEEe-ccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCcc
Q 008066 358 VEVPTDIDESLFFTV-GLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFK 436 (579)
Q Consensus 358 ~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~ 436 (579)
..++.+.+.+ ++... + ....-.|++||+.|..
T Consensus 160 -----~~d~e~~l~~~d~~~~---------~----g~~~~~~~iNG~~~~~----------------------------- 192 (288)
T 3gdc_A 160 -----PADDEMVMVMNGYNTD---------G----GDDNEFYSVNGLPFHF----------------------------- 192 (288)
T ss_dssp -----CCSEEEEEEEEEECCS---------S----TTCCSEEEETTSTTHH-----------------------------
T ss_pred -----CCcceEEEEEeeEecC---------C----CCCcceEEECcccccc-----------------------------
Confidence 0111121111 11100 0 0001236788764421
Q ss_pred ccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 008066 437 FDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLR 516 (579)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~r 516 (579)
....+.++.|++|+|.|.|.+. ....||||||||.|+|++.+.. +..+.++
T Consensus 193 ----------------~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~ 243 (288)
T 3gdc_A 193 ----------------MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYT 243 (288)
T ss_dssp ----------------HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEE
T ss_pred ----------------cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCcee
Confidence 0123688999999999999651 1246999999999999875321 2346899
Q ss_pred eeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEec
Q 008066 517 NTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 517 DTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
||+.|+||+++.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 244 Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 244 DTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp SEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred eEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999863
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=2.3e-28 Score=250.97 Aligned_cols=216 Identities=15% Similarity=0.207 Sum_probs=153.3
Q ss_pred eeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCC------------
Q 008066 219 VVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQP------------ 286 (579)
Q Consensus 219 ~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~------------ 286 (579)
|.+++++|+++|+||+|.....+ .+|.||..+. .+.||.++ +...|.||++++..++++++
T Consensus 77 P~I~v~~Gd~v~v~~~N~l~~~~-sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~ 149 (343)
T 3cg8_A 77 PLIEVNEGDTLHIEFTNTMDVRA-SLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGS 149 (343)
T ss_dssp CCEEEETTCEEEEEEEECSSSCB-CCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECCS
T ss_pred CEEEEECCCEEEEEEEECCCCCe-eEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCCC
Confidence 78999999999999999996544 6999998877 68999864 24468999999999998742
Q ss_pred CcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCCCCCCCCCce
Q 008066 287 PSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDE 366 (579)
Q Consensus 287 ~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~~~ 366 (579)
.|.||+|+|.............+..+.+....+.. . . .|+
T Consensus 150 ~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~--------~-----~---------------------------pd~ 189 (343)
T 3cg8_A 150 AGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--------V-----L---------------------------PDA 189 (343)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------C-----C---------------------------CSE
T ss_pred ceEEEEecCccccccchhhhhcCCeEEEEEecCCC--------C-----C---------------------------CCc
Confidence 37899999853210000000112333332322111 0 0 012
Q ss_pred eEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCCCCcC
Q 008066 367 SLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRS 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 446 (579)
.+.+.+. .|.+||+.+.
T Consensus 190 e~~l~~~-----------------------d~~iNG~~~~---------------------------------------- 206 (343)
T 3cg8_A 190 THTIVFN-----------------------DMTINNRKPH---------------------------------------- 206 (343)
T ss_dssp EEEEEEE-----------------------TTEETTCCTT----------------------------------------
T ss_pred eEEEEcc-----------------------cceecccCCC----------------------------------------
Confidence 2222211 1567875431
Q ss_pred ccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcE
Q 008066 447 LWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGW 526 (579)
Q Consensus 447 ~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~ 526 (579)
..+.+.++.|++|+|+|.|.+ ...||||||||.|+|+.. |.++. ....+.++||+.|+||++
T Consensus 207 ------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~~ 268 (343)
T 3cg8_A 207 ------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPADS 268 (343)
T ss_dssp ------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTCE
T ss_pred ------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCCE
Confidence 123578999999999999965 579999999999999743 32221 112357899999999999
Q ss_pred EEEEEEe---cCceeEEEEecchhhHHccceEEEEEecC
Q 008066 527 AVIRFVA---DNPGVWLMHCHLDVHITWGLAMAFLVENG 562 (579)
Q Consensus 527 v~irf~a---dnpG~wl~HCHi~~H~~~GM~~~~~V~~~ 562 (579)
+.++|++ +|||.|+||||+++|++.|||++|.|.+.
T Consensus 269 ~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 269 FGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 307 (343)
T ss_dssp EEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred EEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecC
Confidence 9999995 89999999999999999999999999764
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=4.9e-28 Score=246.17 Aligned_cols=246 Identities=18% Similarity=0.202 Sum_probs=164.5
Q ss_pred ceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEE-EeeCCcccCceEEeEEEECcccEE
Q 008066 199 DAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTV-VGADASYLKPFTTSVIMLGPGQTT 277 (579)
Q Consensus 199 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~v-ia~DG~~~~p~~~d~l~l~pG~R~ 277 (579)
..+++||+. ..|.+++++|+++++||.|... ...++|+||....- .+.||.+. +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 578999984 2389999999999999999985 45589999986553 47899753 233578999999
Q ss_pred EEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCC
Q 008066 278 DVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQK 357 (579)
Q Consensus 278 dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p 357 (579)
+..++++ .+|+||+|||.....+ ....+..+.|....+.. . + .+
T Consensus 89 ~y~f~~~-~~Gt~wYH~H~~~~~~---~~~~Gl~G~lIV~~~~~------~-----~-~~-------------------- 132 (318)
T 3g5w_A 89 TYKFKAE-PAGTMWYHCHVNVNEH---VTMRGMWGPLIVEPKNP------L-----P-IE-------------------- 132 (318)
T ss_dssp EEEEECC-SCEEEEEECCSSHHHH---HHHSCCEEEEEEECSSC------C-----H-HH--------------------
T ss_pred EEEEEcC-CCEEEEEEccCChhhh---hccCCCEEEEEEcCCCc------c-----c-cc--------------------
Confidence 9999998 6899999999632100 00123344444443211 0 0 00
Q ss_pred CCCCCCCceeEEEEec-cCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCcc
Q 008066 358 VEVPTDIDESLFFTVG-LGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFK 436 (579)
Q Consensus 358 ~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~ 436 (579)
...++.+.+.+. ....... .. .....+....-.|.|||+.|.
T Consensus 133 ----~~~d~e~~l~l~dw~~~~~~--~~-~~~~~~~~~~d~~~ING~~~~------------------------------ 175 (318)
T 3g5w_A 133 ----KTVTKDYILMLSDWVSSWAN--KP-GEGGIPGDVFDYYTINAKSFP------------------------------ 175 (318)
T ss_dssp ----HTCCEEEEEEEEEECGGGTT--CT-TCCCCTTCCCCEEEETTBCBT------------------------------
T ss_pred ----ccccceeEEEEEeecccccc--cc-ccCCCCCCcCcEEEEcCcCCC------------------------------
Confidence 000111111100 0000000 00 000000001123677776442
Q ss_pred ccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 008066 437 FDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLR 516 (579)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~r 516 (579)
.+..+.++.|++++|+|.|.+ ...||||||||.|+|++...+ .+.+|.++
T Consensus 176 ----------------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~ 225 (318)
T 3g5w_A 176 ----------------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKG 225 (318)
T ss_dssp ----------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEE
T ss_pred ----------------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccc
Confidence 123468899999999999965 458999999999999998422 12357899
Q ss_pred eeEEeCCCcEEEEEEEecCceeEEEEecchhhHH------ccceEEEEEec
Q 008066 517 NTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHIT------WGLAMAFLVEN 561 (579)
Q Consensus 517 DTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~------~GM~~~~~V~~ 561 (579)
||+.|+||+++.|+|+++|||.|+||||+++|++ .|||.++.|..
T Consensus 226 dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 226 DTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp SEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred cEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECC
Confidence 9999999999999999999999999999999998 68999999865
No 42
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=8.4e-28 Score=242.29 Aligned_cols=219 Identities=19% Similarity=0.237 Sum_probs=152.2
Q ss_pred CeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCC-----------
Q 008066 217 DTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQ----------- 285 (579)
Q Consensus 217 ~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~----------- 285 (579)
+.|+|++++|++++++|.|.... ..++|.||..+.. +.||..+. .-.|.||+++...++++.
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~-~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYDV-NSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCCC-CccEEeCCcccCC-ccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 34889999999999999999855 4589999987653 68997641 124789999999998762
Q ss_pred -CCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCCCCCCCCC
Q 008066 286 -PPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDI 364 (579)
Q Consensus 286 -~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~ 364 (579)
.+|.||+|||.........-...+..+.|....+.. . ..
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--------~--------------------------------~~ 168 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--------L--------------------------------LP 168 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------C--------------------------------CC
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEecccc--------c--------------------------------Cc
Confidence 459999999853221100000113444444443221 0 01
Q ss_pred ceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCCCC
Q 008066 365 DESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVS 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 444 (579)
|+.+.+.+. .|.+|++.+
T Consensus 169 d~e~~l~~~-----------------------~~~~Ng~~~--------------------------------------- 186 (299)
T 3t9w_A 169 KRQFTVVFN-----------------------DMMINNRAH--------------------------------------- 186 (299)
T ss_dssp SEEEEEEEE-----------------------TTEETTCCT---------------------------------------
T ss_pred cccceeeee-----------------------eeeecCccc---------------------------------------
Confidence 222222211 144565422
Q ss_pred cCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCC
Q 008066 445 RSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVG 524 (579)
Q Consensus 445 ~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~ 524 (579)
.+...+.++.|++|+|+|.|.+ ...||||||||.|+|+..+.. ......+.++||+.|.||
T Consensus 187 -------~~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~---------~~~~~~~~~~Dtv~v~PG 247 (299)
T 3t9w_A 187 -------HDAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMR---------TSEYDPSPLIDIKDLNPG 247 (299)
T ss_dssp -------TCCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSC---------CSTTCCCCEESEEECCTT
T ss_pred -------cccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEecccc---------cCCcCCCCceeeEEeCCc
Confidence 1234578999999999999965 568999999999998876432 122345678999999999
Q ss_pred cEE---EEEEEecCceeEEEEecchhhHHccceEEEEEecCc
Q 008066 525 GWA---VIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 525 g~v---~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
... +++|+++|||.|+|||||++|++.|||+.|+|.+.+
T Consensus 248 e~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 248 VSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp CEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eeEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 654 455667899999999999999999999999998754
No 43
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=1.5e-27 Score=245.18 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=159.7
Q ss_pred ceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEe---eCCcccCceEEeEEEECccc
Q 008066 199 DAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVG---ADASYLKPFTTSVIMLGPGQ 275 (579)
Q Consensus 199 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via---~DG~~~~p~~~d~l~l~pG~ 275 (579)
..+++||+. ..|.+++++|+++|+||+|..... .++|.||. .+.. .||.+. ++...|.|||
T Consensus 24 ~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~HG~--~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSLP-HTIHWHGV--HQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEEESSSC-BCCEEETC--CCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCcc---------CCCeEEEECCCEEEEEEEECCCCC-ccEEeCCC--CcCCCcccCCCCc----cccCccCCCC
Confidence 579999984 128899999999999999999544 46666664 4555 599853 2345799999
Q ss_pred EEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCC
Q 008066 276 TTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSP 355 (579)
Q Consensus 276 R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l 355 (579)
|+++.++++ .+|+||+|||.....+ ....+..+.+....+.. . .++
T Consensus 88 ~~~y~f~~~-~~Gt~wyH~H~~~~~q---~~~~Gl~G~liV~p~~~------~------~~~------------------ 133 (339)
T 2zwn_A 88 SYTYKFKAD-RIGTLWYHCHVNVNEH---VGVRGMWGPLIVDPKQP------L------PIE------------------ 133 (339)
T ss_dssp EEEEEEECC-SCEEEEEECCSSHHHH---TTTSCCEEEEEEECSSC------C------TTG------------------
T ss_pred eEEEEEECC-CCEEEEEEecCCchhh---hhcCCceEeEEecCCCc------c------ccc------------------
Confidence 999999998 6899999999632110 01022233333332111 0 000
Q ss_pred CCCCCCCCCceeEEEEec-cCcCCCCCCCCCCcccCCCC-CeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCC
Q 008066 356 QKVEVPTDIDESLFFTVG-LGLNNCPRNFRSSRCQGPNG-TRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANP 433 (579)
Q Consensus 356 ~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 433 (579)
...++.+.+.+. ....... ... . .+... ....|.+||+.+.
T Consensus 134 ------~~~d~e~~l~l~d~~~~~~~--~~~-~-~g~~~~~~~~~~ING~~~~--------------------------- 176 (339)
T 2zwn_A 134 ------KRVTKDVIMMMSTWESAVAD--KYG-E-GGTPMNVADYFSVNAKSFP--------------------------- 176 (339)
T ss_dssp ------GGCSEEEEEEEEEECGGGTT--CTT-C-CCSTTSCCCEEEETTBCTT---------------------------
T ss_pred ------ccCCceEEEEeeheeccccc--ccC-C-CCCCccccceEEEccccCC---------------------------
Confidence 000111111110 0000000 000 0 00000 0123556664331
Q ss_pred CccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCC
Q 008066 434 PFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDP 513 (579)
Q Consensus 434 p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p 513 (579)
...++.++.|++++|+|.|.+ ...||||||||+|+|++.... .+.+|
T Consensus 177 -------------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p 223 (339)
T 2zwn_A 177 -------------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSP 223 (339)
T ss_dssp -------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEE
T ss_pred -------------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCC
Confidence 123478899999999999975 459999999999999998422 12347
Q ss_pred CcceeEEeCCCcEEEEEEEecCceeEEEEecchhh------HHccceEEEEEecC
Q 008066 514 PLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVH------ITWGLAMAFLVENG 562 (579)
Q Consensus 514 ~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H------~~~GM~~~~~V~~~ 562 (579)
.++||+.|+||+++.|+|++++||.|++|||+++| ++.||++.+.|...
T Consensus 224 ~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 224 YYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred cEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 88999999999999999999999999999999999 78999999988643
No 44
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=1.8e-27 Score=237.49 Aligned_cols=218 Identities=15% Similarity=0.205 Sum_probs=156.9
Q ss_pred eeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCC-----------
Q 008066 218 TVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQP----------- 286 (579)
Q Consensus 218 ~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~----------- 286 (579)
.|.+++++|++++++|.|.. ....++|+||..+.. +.||.. +..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 48899999999999999997 455589999987765 689975 233468999999999999752
Q ss_pred -CcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCCCCCCCCCc
Q 008066 287 -PSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDID 365 (579)
Q Consensus 287 -~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~~ 365 (579)
+|.||+|+|.........-...+..+.|....+.. . . .|
T Consensus 108 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~------~-------~---------------------------~d 147 (276)
T 3kw8_A 108 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD------V-------L---------------------------PD 147 (276)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------C-------C---------------------------CS
T ss_pred CCEEEEEecCccccccchhhhhCccEEEEEEecCCC------c-------c---------------------------cc
Confidence 58899999963210000001123445554443222 0 0 02
Q ss_pred eeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCCCCc
Q 008066 366 ESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSR 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 445 (579)
+.+.+.+. .|+|||+.|.
T Consensus 148 rE~~l~l~-----------------------~~~iNG~~~~--------------------------------------- 165 (276)
T 3kw8_A 148 ATHTIVFN-----------------------DMTINNRKPH--------------------------------------- 165 (276)
T ss_dssp EEEEEEEE-----------------------TTEETTCCTT---------------------------------------
T ss_pred cceEEEec-----------------------ccccceeccc---------------------------------------
Confidence 22222211 1578876442
Q ss_pred CccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCc
Q 008066 446 SLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGG 525 (579)
Q Consensus 446 ~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 525 (579)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|++++. |.++.. ...+.++||+.|+|++
T Consensus 166 -------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v~pg~ 226 (276)
T 3kw8_A 166 -------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKITGPAD 226 (276)
T ss_dssp -------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEECTTC
T ss_pred -------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEecc--CccCCC-------cccccCCccEEeCCCc
Confidence 124578999999999999965 469999999999999753 322211 1235699999999999
Q ss_pred EEEEEEEec---CceeEEEEecchhhHHccceEEEEEecCc
Q 008066 526 WAVIRFVAD---NPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 526 ~v~irf~ad---npG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
++.++|+++ |||.|+||||+++|++.|||+.|+|.+.+
T Consensus 227 ~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 227 SFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 999999996 89999999999999999999999998764
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=4.3e-27 Score=238.99 Aligned_cols=219 Identities=15% Similarity=0.165 Sum_probs=152.5
Q ss_pred CeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCC-----------
Q 008066 217 DTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQ----------- 285 (579)
Q Consensus 217 ~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~----------- 285 (579)
+.|.|++++|++++++|.|.... ..++|.||..+.. +.||... ..-.|.||++++..+++..
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 34889999999999999999854 4589999987653 6799754 1124789999999887652
Q ss_pred -CCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCCCCCCCCC
Q 008066 286 -PPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDI 364 (579)
Q Consensus 286 -~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p~~~p~~~ 364 (579)
..|.||+|||.....+...-...+..+.|....+.. ...
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----------------------------------------~~~ 152 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----------------------------------------VLP 152 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------------------------------BCC
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc----------------------------------------ccc
Confidence 358899999953221100000123444444443221 001
Q ss_pred ceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCCCC
Q 008066 365 DESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVS 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 444 (579)
|+.+.+.+. .|++|+..+.
T Consensus 153 d~e~~l~~~-----------------------d~t~Ng~~~~-------------------------------------- 171 (313)
T 3tas_A 153 DRTHTIVFN-----------------------DMTINNRPAH-------------------------------------- 171 (313)
T ss_dssp SEEEEEEEE-----------------------TTEETTCCTT--------------------------------------
T ss_pred cccceeecc-----------------------chhcccCCcc--------------------------------------
Confidence 222222221 1456654221
Q ss_pred cCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCC
Q 008066 445 RSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVG 524 (579)
Q Consensus 445 ~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~ 524 (579)
..+.+.++.|++|+|+|.|.+ ...||||||||.|+|+..+.. ......+.++||+.|.|+
T Consensus 172 --------~~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~---------~~~~~~~~~~Dtv~l~Pg 231 (313)
T 3tas_A 172 --------TGPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGML---------TGPDDPSQVIDNKICGPA 231 (313)
T ss_dssp --------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSC---------CSTTCCCCEESEEEECTT
T ss_pred --------cccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCc---------cCCCCCCeeeeEEEeCCC
Confidence 123478899999999999965 578999999999999876422 112345789999999999
Q ss_pred cEEEEEEEe---cCceeEEEEecchhhHHccceEEEEEecCc
Q 008066 525 GWAVIRFVA---DNPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 525 g~v~irf~a---dnpG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
+.+.+++.+ +|||.|+|||||++|++.|||+.|+|.+.+
T Consensus 232 er~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 232 DSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp CEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred cceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 888777754 699999999999999999999999998754
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=2.3e-25 Score=225.69 Aligned_cols=236 Identities=12% Similarity=0.081 Sum_probs=135.8
Q ss_pred EEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccC----ceEEeEEEECcccE
Q 008066 201 YTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLK----PFTTSVIMLGPGQT 276 (579)
Q Consensus 201 ~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~l~l~pG~R 276 (579)
.++||.++ |.+++++|+++++||.|.. ...+++|.||..+.. +.||.+.. +..++...|.|||+
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 45788766 7899999999999999987 455689999987543 68998651 12233567999999
Q ss_pred EEEEEEcCCCC---------cceEEEEEeccCCCCCCCCCcce-EEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchh
Q 008066 277 TDVLIKGDQPP---------SRYYLAARAYASAPNAPFDNTTT-TAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVT 346 (579)
Q Consensus 277 ~dv~v~~~~~~---------g~~~l~~~~~~~~~~~~~~~~~~-~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~ 346 (579)
++..+++++.+ |+||+|+|.....+ . ..+. .++|.+....... . +.....+.
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q---~-~~GL~G~liV~~~~~~~~-----~----~~~~~~d~----- 181 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED---F-NSGLIGPLLICKKGTLTE-----D----GTQKMFEK----- 181 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH---H-HTTCCEEEEEECTTCBCT-----T----SSBSSSCC-----
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh---h-ccCceEEEEEccCCCCCc-----c----CCcCcccc-----
Confidence 99999998643 69999999522100 0 1122 2344433211100 0 00000000
Q ss_pred hcccCcCCCCCCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCccc
Q 008066 347 AFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFT 426 (579)
Q Consensus 347 ~~~~~~~~l~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~ 426 (579)
++..+. .. +...... . ... ...+.+||+.+.
T Consensus 182 ----e~~l~~-----~d------~d~~~~~--~----------~~~--~~~~~ING~~~~-------------------- 212 (306)
T 1sdd_A 182 ----QHVLMF-----AV------FDESKSW--N----------QTS--SLMYTVNGYVNG-------------------- 212 (306)
T ss_dssp ----CCCCBC-----CE------EETTSSS--S----------CCC--CEEECSSSCCSS--------------------
T ss_pred ----eEEEEE-----Ee------ccccccc--c----------cCC--CcceeeCCEecC--------------------
Confidence 000000 00 0000000 0 001 123566765431
Q ss_pred CCCCCCCCccccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCC
Q 008066 427 TDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTS 506 (579)
Q Consensus 427 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~ 506 (579)
..+.+.++.|++++|+|.|.+. ....|+||+|||.|++ .
T Consensus 213 --------------------------~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----d---------- 251 (306)
T 1sdd_A 213 --------------------------TMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----N---------- 251 (306)
T ss_dssp --------------------------CCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----T----------
T ss_pred --------------------------CCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----C----------
Confidence 0123467889999999999652 2357999999999986 1
Q ss_pred CCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecC
Q 008066 507 KFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENG 562 (579)
Q Consensus 507 ~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~ 562 (579)
+.++||+.|.||+.+.++|++++||.|+||||+++|++.|||+.|.|.+.
T Consensus 252 ------G~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 252 ------HHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp ------TEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred ------CEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 13589999999999999999999999999999999999999999999764
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=1.8e-22 Score=225.13 Aligned_cols=245 Identities=12% Similarity=0.148 Sum_probs=143.4
Q ss_pred eeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccC---c-eEEeEEEECcccEEEEEEEcCCC-----Cc
Q 008066 218 TVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLK---P-FTTSVIMLGPGQTTDVLIKGDQP-----PS 288 (579)
Q Consensus 218 ~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~---p-~~~d~l~l~pG~R~dv~v~~~~~-----~g 288 (579)
.|++++++|+++++||.|.... ..++|.||.... .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 3889999999999999999854 458999998765 478998642 1 22346679999999999999864 57
Q ss_pred ----ceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCC-CCccchh-hcccCcCCCCCCCCCC
Q 008066 289 ----RYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAF-NDTATVT-AFTKKLRSPQKVEVPT 362 (579)
Q Consensus 289 ----~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~-~~~~~~~-~~~~~~~~l~p~~~p~ 362 (579)
+||+|+|.....+ ...+..+.|....+.... .. +..+.. .+..... .+..........
T Consensus 146 ~~c~T~wYHsH~~~~~q----~~~GL~G~lIV~~~~~~~-----~~---~~~~~~~~e~~l~l~~~d~~~~w~~~~---- 209 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKD----IHSGLIGPLLICRKGTLD-----KE---TNMPVDMREFVLLFMVFDEKKSWYYDK---- 209 (647)
T ss_dssp CSEEEEEEECCSSHHHH----HTTTCEEEEEEECTTSSC-----TT---SCCCSSCCEEEEEEEEEEGGGSSCCC-----
T ss_pred CCceEEEEccCCCCccc----ccccCccCEEEeeCCCcc-----cc---cCCCCcceeEEEEEEeecCcccccccc----
Confidence 9999999632110 011233333333222100 00 001100 0000000 000000000000
Q ss_pred CCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCCCC
Q 008066 363 DIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGN 442 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 442 (579)
.. +..+.. .. ... ......+.+||+.+
T Consensus 210 ~~--~~~~~~-~~----------~~~---~~~~~~~~iNG~~~------------------------------------- 236 (647)
T 1sdd_B 210 KP--TRSWRR-AS----------SEV---KNSHEFHAINGMIY------------------------------------- 236 (647)
T ss_dssp ------------------------------CCCEEEEETTBSS-------------------------------------
T ss_pred Cc--cccccc-CC----------cch---hhcCceeccCCEec-------------------------------------
Confidence 00 000000 00 000 00011234454332
Q ss_pred CCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeC
Q 008066 443 VSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVP 522 (579)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp 522 (579)
..+.+.++.|++++|+|.|.+. ..+.||||+|||.|+|++. ++.++||+.|.
T Consensus 237 ----------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l~ 288 (647)
T 1sdd_B 237 ----------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWPLL 288 (647)
T ss_dssp ----------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEEEC
T ss_pred ----------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceEEEC
Confidence 1234678999999999999651 2358999999999999854 25589999999
Q ss_pred CCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEec
Q 008066 523 VGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 523 ~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
||+++.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 289 pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 289 PGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp TTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 999999999999999999999999999999999999964
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=4.6e-21 Score=195.87 Aligned_cols=249 Identities=15% Similarity=0.140 Sum_probs=158.4
Q ss_pred ceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCC-ccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEE
Q 008066 199 DAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLN-QPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTT 277 (579)
Q Consensus 199 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~ 277 (579)
..+++||+. ..|.+++++|++++||++|.... ..+++|+||.. +.||... ...|.||+++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 579999984 23789999999999999999853 56789999863 6788743 1248999999
Q ss_pred EEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCC
Q 008066 278 DVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQK 357 (579)
Q Consensus 278 dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p 357 (579)
++.++++ .+|+||+|||...... . ...+..+.+....+.. +| ..++.. .. -++...-
T Consensus 120 ~y~f~~~-~~Gt~wyH~h~~~~~~-~--~~~Gl~G~~iV~~~~~-----------~p---~~d~e~-~l----~~~d~~~ 176 (327)
T 1kbv_A 120 TFSFKAL-QPGLYIYHCAVAPVGM-H--IANGMYGLILVEPKEG-----------LP---KVDKEF-YI----VQGDFYT 176 (327)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHH-H--HHTTCEEEEEEECTTC-----------CC---CCSEEE-EE----EEEEECB
T ss_pred EEEEECC-CCeEEEEEeCCCChhh-h--hhcceEEEEEEecCCC-----------CC---CCceEE-EE----Eeeeeec
Confidence 9999998 4899999998532100 0 0112334444433211 01 111000 00 0000000
Q ss_pred CCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccc
Q 008066 358 VEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKF 437 (579)
Q Consensus 358 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~ 437 (579)
.... .......+ .... ..+..+ ..+.+||+.+..
T Consensus 177 ~~~~-~~~g~~~~--~~~~-----------~~~~~~--~~~~iNG~~~~~------------------------------ 210 (327)
T 1kbv_A 177 KGKK-GAQGLQPF--DMDK-----------AVAEQP--EYVVFNGHVGAL------------------------------ 210 (327)
T ss_dssp SSCT-TCCEEECB--CHHH-----------HHHTCC--SEEEETTSTTTT------------------------------
T ss_pred cCcc-cccccccc--ChhH-----------hccCCC--ceEEEcCcccCC------------------------------
Confidence 0000 00000000 0000 000000 123344432210
Q ss_pred cCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcce
Q 008066 438 DYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRN 517 (579)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rD 517 (579)
.....+.++.|++++|.|.|.+ ....|+||+|||.|+|++...+ +.+|.++|
T Consensus 211 --------------~~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~------------~~~p~~~d 262 (327)
T 1kbv_A 211 --------------TGDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGG------------KLINENVQ 262 (327)
T ss_dssp --------------SGGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBS
T ss_pred --------------CCceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCC------------cCCCCcee
Confidence 0124578999999999999965 2468999999999999998533 12367899
Q ss_pred eEEeCCCcEEEEEEEecCceeEEEEecchhhH-HccceEEEEEecCc
Q 008066 518 TVGVPVGGWAVIRFVADNPGVWLMHCHLDVHI-TWGLAMAFLVENGV 563 (579)
Q Consensus 518 Tv~vp~~g~v~irf~adnpG~wl~HCHi~~H~-~~GM~~~~~V~~~~ 563 (579)
++.|.+|+.+.|.|++++||.|++|||+.+|. ..||++.+.|....
T Consensus 263 ~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 263 STIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999999999999999999999995 89999999997644
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=1.3e-20 Score=194.02 Aligned_cols=94 Identities=26% Similarity=0.332 Sum_probs=77.9
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCC--cceeEEeCCCcEEEEEEE
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPP--LRNTVGVPVGGWAVIRFV 532 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~g~v~irf~ 532 (579)
..+.++.|++++|++.|.+ ...|++|+|||.|+|++. |.+ .+++ ++||+.|++|+.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 5678999999998877743 567899999999999852 221 1233 479999999999999999
Q ss_pred ecCceeEEEEecch-hhHHccceEEEEEecCcc
Q 008066 533 ADNPGVWLMHCHLD-VHITWGLAMAFLVENGVT 564 (579)
Q Consensus 533 adnpG~wl~HCHi~-~H~~~GM~~~~~V~~~~~ 564 (579)
+++||.|+||||++ +|++.|||+.|.|.+..+
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999986543
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.84 E-value=8.7e-23 Score=229.15 Aligned_cols=88 Identities=18% Similarity=0.331 Sum_probs=78.0
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++++|+|.|.+. ....||||||||.|+|++.+ +.++||+.|+||+++.|+|+++
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCS
T ss_pred CCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeC
Confidence 34678999999999999652 24589999999999998652 2389999999999999999999
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
+||.|+||||+++|++.|||+.|.|.
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCCceEEEeccccccccccccccccc
Confidence 99999999999999999999999984
No 51
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.82 E-value=5.5e-19 Score=181.23 Aligned_cols=94 Identities=21% Similarity=0.197 Sum_probs=73.2
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCC-cceeEEeCCCcEEEEEEEe
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPP-LRNTVGVPVGGWAVIRFVA 533 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vp~~g~v~irf~a 533 (579)
..+.++.|++++|++.|.+ ...|+.++|+|.|+|++ .|.+. ..|. ++||+.|.+|+.+.+.|.+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWE--TGKFH----------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEe--CCccc----------CCCccCcceEEECCCceEEEEEEc
Confidence 4578999999998777643 23344446778888876 23211 1122 5899999999999999999
Q ss_pred cCceeEEEEecchhhH-HccceEEEEEecCc
Q 008066 534 DNPGVWLMHCHLDVHI-TWGLAMAFLVENGV 563 (579)
Q Consensus 534 dnpG~wl~HCHi~~H~-~~GM~~~~~V~~~~ 563 (579)
++||.|+||||++.|+ +.|||+.|.|....
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 9999999999999997 99999999997644
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.79 E-value=5.1e-18 Score=174.33 Aligned_cols=94 Identities=20% Similarity=0.268 Sum_probs=74.8
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCC--cceeEEeCCCcEEEEEEE
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPP--LRNTVGVPVGGWAVIRFV 532 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~g~v~irf~ 532 (579)
+.+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ .+|. +.||+.|++|+.+.+.+.
T Consensus 225 ~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~pGer~dvlv~ 288 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIRGGSAGAALYT 288 (336)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCCccccceEEEECCCCcEEEEEE
Confidence 5688999999998655532 34556667999999985 3321 2233 469999999999999999
Q ss_pred ecCceeEEEEecchhhH-HccceEEEEEecCcc
Q 008066 533 ADNPGVWLMHCHLDVHI-TWGLAMAFLVENGVT 564 (579)
Q Consensus 533 adnpG~wl~HCHi~~H~-~~GM~~~~~V~~~~~ 564 (579)
+++||.|+||||.+.|. +.||++.|.|.+..+
T Consensus 289 ~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 289 FKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred cCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 99999999999999985 999999999986543
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.78 E-value=1.8e-18 Score=184.37 Aligned_cols=249 Identities=12% Similarity=0.118 Sum_probs=159.3
Q ss_pred ceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCC-ccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEE
Q 008066 199 DAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLN-QPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTT 277 (579)
Q Consensus 199 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~ 277 (579)
..+++||+. ..|.+++++|++++|||.|.... ..+++|+||+. ..||... +..|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 579999985 23789999999999999999643 56789999975 4788642 2258999999
Q ss_pred EEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCcCCCCC
Q 008066 278 DVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQK 357 (579)
Q Consensus 278 dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~p 357 (579)
++.++++ .+|.||+|||...... . ...+..+.+.+..+.. .+.++. .... -++...-
T Consensus 110 ~y~f~~~-~~Gt~~yH~H~~~~~~-~--~~~Gl~G~~iv~~~~~--------------~~~~d~-e~~l----~l~d~~~ 166 (442)
T 2zoo_A 110 TFNFKAL-NPGLYIYHCATAPVGM-H--IANGMYGLILVEPKEG--------------LAPVDR-EYYL----VQGDFYT 166 (442)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHH-H--HHTTCEEEEEEECTTC--------------CCCCSE-EEEE----EEEEECB
T ss_pred EEEEEcC-CCeEEEEecCCCChHH-H--HhCccEEEEEEeCCCC--------------CCCCCc-eEEE----Eeeeeec
Confidence 9999998 6999999997421100 0 1123455555553211 011110 0000 0000000
Q ss_pred CCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccc
Q 008066 358 VEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKF 437 (579)
Q Consensus 358 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~ 437 (579)
. ......-....... ... ....-.+.|||+.+..
T Consensus 167 ~---~~~~~~~~~~~~~~-----------~~~--~~~~~~~liNG~~~~~------------------------------ 200 (442)
T 2zoo_A 167 K---GEFGEAGLQPFDMA-----------KAI--DEDADYVVFNGSVGST------------------------------ 200 (442)
T ss_dssp S---SCTTCCEEECBCHH-----------HHH--TTCCSEEEETTSTTTT------------------------------
T ss_pred c---CcccccccccCChh-----------Hhc--cCCCCEEEECCCcCCC------------------------------
Confidence 0 00000000000000 000 0000113344432100
Q ss_pred cCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcce
Q 008066 438 DYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRN 517 (579)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rD 517 (579)
...+.+.++.|++++|.|.|.+ ....|+||+||+.|.|++...+ ...|.+.|
T Consensus 201 --------------~~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~ 252 (442)
T 2zoo_A 201 --------------TDENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQ 252 (442)
T ss_dssp --------------SGGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBS
T ss_pred --------------CCCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCc------------cCCCccce
Confidence 0113578999999999999965 2468999999999999987432 12367889
Q ss_pred eEEeCCCcEEEEEEEecCceeEEEEecchhh-HHccceEEEEEecCc
Q 008066 518 TVGVPVGGWAVIRFVADNPGVWLMHCHLDVH-ITWGLAMAFLVENGV 563 (579)
Q Consensus 518 Tv~vp~~g~v~irf~adnpG~wl~HCHi~~H-~~~GM~~~~~V~~~~ 563 (579)
++.|.||+...+.|++++||.|.+|||...| ...||++.|.|....
T Consensus 253 ~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 253 TTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 9999999999999999999999999999999 599999999997654
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.77 E-value=1.1e-17 Score=177.69 Aligned_cols=218 Identities=20% Similarity=0.222 Sum_probs=155.4
Q ss_pred ceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCCCCCCCc-----ccccccCCCCeEEEEE
Q 008066 51 CKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAWADGPEF-----VTQCPIRPGMSYTYRF 124 (579)
Q Consensus 51 g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DGv~~-----~~~~~i~PG~~~~y~f 124 (579)
|.....+++||+. .|.|+|++| ++++||.|.... ...+|++|...... ..||.+- +....|.||||++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi-~~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI-AADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE-ecCCCCCCCceEeceEEECCceeEEEEE
Confidence 3456789999997 699999999 999999999864 67888888754432 2688542 3456799999999999
Q ss_pred EecCCCcceeeeecccccc----cce--------------eeeEEEeCCCC-CCCCCCCC----------CCceeEEeee
Q 008066 125 TIQGQEGTLWWHAHSSWLR----ATV--------------YGALIIHPKEG-SSYPFPKP----------KRETPILLGE 175 (579)
Q Consensus 125 ~~~~~~Gt~~yH~h~~~~~----~Gl--------------~G~liV~~~~~-~~~~~~~~----------~~e~~l~~~d 175 (579)
+. +++|.||++++..... .|| ....+++.... ...+++.. .....+.+.-
T Consensus 251 ~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~~l~~~~~~r~~~l~~ 329 (439)
T 2xu9_A 251 RL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTE 329 (439)
T ss_dssp EC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCCCCCCCSEEEEEEEEE
T ss_pred Ec-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccCCCcccCCCCCcceEEEEEe
Confidence 97 5599999999742111 022 11222222111 11111110 0001111110
Q ss_pred eccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEe
Q 008066 176 WWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVG 255 (579)
Q Consensus 176 ~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via 255 (579)
- . ....++|||+.+. .....+.++.|++++|+|.|.+ ...|+||||||.|+|++
T Consensus 330 ~------------~-------~g~~~~iNg~~~~------~~~~~~~~~~g~~~~~~~~N~~-~~~HP~HLHG~~F~Vl~ 383 (439)
T 2xu9_A 330 D------------M-------MAARFFINGQVFD------HRRVDLKGQAQTVEVWEVENQG-DMDHPFHLHVHPFQVLS 383 (439)
T ss_dssp E------------G-------GGTEEEETTBCCC------TTCCCEEECTTCEEEEEEEECS-SSCEEEEESSCCBEEEE
T ss_pred e------------c-------cCceEeECCEECC------CCCCceecCCCCEEEEEEEcCC-CCCCCceeCCCcEEEEe
Confidence 0 0 0136899999863 1224588999999999999997 56679999999999999
Q ss_pred eCCccc-CceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 256 ADASYL-KPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 256 ~DG~~~-~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
.+|... .|.++||+.|.||+++.|.++++ .||.|.+|||....
T Consensus 384 ~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil~H 427 (439)
T 2xu9_A 384 VGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIVEH 427 (439)
T ss_dssp ETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSHHH
T ss_pred eCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcchh
Confidence 999876 68899999999999999999988 79999999997543
No 55
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.77 E-value=1.1e-17 Score=178.15 Aligned_cols=251 Identities=16% Similarity=0.143 Sum_probs=159.7
Q ss_pred eEEEEEEEEEEeeecC-----------ceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-CceEEe-CCccccCCC
Q 008066 35 AHHHDFVIQATPVKRL-----------CKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-NVTIHW-HGVRQMRTA 101 (579)
Q Consensus 35 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~-HG~~~~~~~ 101 (579)
.+++.|.++.-....+ |.....++|||+. .|+|+|++| ++|+||.|.... ...+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 4567777665443322 3445789999996 699999999 999999999864 677888 785543221
Q ss_pred CCCCCC-----cccccccCCCCeEEEEEEecCCCcceeeeecccccccce-------------eeeEEEeCCCCCCCCCC
Q 008066 102 WADGPE-----FVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATV-------------YGALIIHPKEGSSYPFP 163 (579)
Q Consensus 102 ~~DGv~-----~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~Gl-------------~G~liV~~~~~~~~~~~ 163 (579)
.||.+ .+....|.||||+++.+++ .+.|+||++++......|+ ...+-.........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 68853 2557789999999999997 5689999998864332221 011111111100000
Q ss_pred CCCCceeEEeeeeccCCh-HHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccE
Q 008066 164 KPKRETPILLGEWWDANP-IDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPL 242 (579)
Q Consensus 164 ~~~~e~~l~~~d~~~~~~-~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~ 242 (579)
..+.+..+..+..... ..........+ .++|||+.+. ...+.+.++.|++++|+|+|. ..+
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~~-------~~~iNg~~f~------~~~~~~~~~~G~~~~~~l~N~---~~H 367 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLGD-------DPGINGQLWD------VNRIDVTAQQGTWERWTVRAD---EPQ 367 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEECS-------SSSBTTBCCC------TTCCCEEEETTCEEEEEEEEE---EEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEee-------EEEECCEeCC------CCCCcEEcCCCCEEEEEEECC---CCc
Confidence 0000000000000000 00000000000 3679999863 123568999999999999998 478
Q ss_pred EEEEcCCeeEEEeeCCccc---CceEEeEEEECcccEEEEEEEcCCCCcc----eEEEEEeccCCCCCCCCCcceEEEEE
Q 008066 243 FFTIANHQFTVVGADASYL---KPFTTSVIMLGPGQTTDVLIKGDQPPSR----YYLAARAYASAPNAPFDNTTTTAILE 315 (579)
Q Consensus 243 ~~~l~gh~~~via~DG~~~---~p~~~d~l~l~pG~R~dv~v~~~~~~g~----~~l~~~~~~~~~~~~~~~~~~~~il~ 315 (579)
+||||||.|+|++.||... .|.++||+.| |+++.|.++++ .||. |.+|||.+...+ .+..+.+.
T Consensus 368 P~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil~H~d------~GMm~~~~ 438 (451)
T 2uxt_A 368 AFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTLEMAD------RGSIGQLL 438 (451)
T ss_dssp EEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSHHHHH------TTCEEEEE
T ss_pred CeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCchhHHh------CCCcEEEE
Confidence 9999999999999999875 4789999999 99999999999 4666 999999765432 24556666
Q ss_pred ecc
Q 008066 316 YKS 318 (579)
Q Consensus 316 y~~ 318 (579)
+..
T Consensus 439 v~~ 441 (451)
T 2uxt_A 439 VNP 441 (451)
T ss_dssp EEC
T ss_pred Ecc
Confidence 653
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.70 E-value=2.2e-15 Score=162.68 Aligned_cols=259 Identities=17% Similarity=0.153 Sum_probs=161.5
Q ss_pred EEEEEEEEEeeecCce-----eeeEEEEcCCCC--------CCeEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCC
Q 008066 37 HHDFVIQATPVKRLCK-----THNTITVNGMYP--------GPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAW 102 (579)
Q Consensus 37 ~~~l~~~~~~~~~~g~-----~~~~~~~ng~~p--------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~ 102 (579)
++.|.+..-....++. ....++|||+.. .|+|+|++|+++|+||.|.... ...+|++|...... .
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi-~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTII-E 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-E
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEE-e
Confidence 4455555433333331 246789999863 2899999999999999999864 57788887654332 2
Q ss_pred CCCCC----cccccccCCCCeEEEEEEecCCCcceeeeeccccc-------c-cceeeeEEEeCCCCCCCCCCCCCCcee
Q 008066 103 ADGPE----FVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWL-------R-ATVYGALIIHPKEGSSYPFPKPKRETP 170 (579)
Q Consensus 103 ~DGv~----~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~-------~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 170 (579)
.||.+ .+....|.||||++..+++...+|.||.+++.... . .++..+++.........|......+ .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-P 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-C
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-c
Confidence 68853 13456699999999999985568999999985311 1 1333344433221111010000000 0
Q ss_pred EEeeeeccCC------hHHHH---HH-hhhCCCCCCCCceEEEcCCCCCCCCC-------------C--CCCeeeEEEec
Q 008066 171 ILLGEWWDAN------PIDVV---RQ-ATRTGAAPNISDAYTINGQPGDLYNC-------------S--SQDTVVVPIDS 225 (579)
Q Consensus 171 l~~~d~~~~~------~~~~~---~~-~~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~ 225 (579)
..+.++.... ..... .. ...-... .....|+|||+.+..-.- . ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 0000000000 00000 00 0000000 001268899998632100 0 01235689999
Q ss_pred CCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCccc----CceEEeEEEE-CcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 226 GETNLLRVINSGLNQPLFFTIANHQFTVVGADASYL----KPFTTSVIML-GPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 226 G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~----~p~~~d~l~l-~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
|++++++++|......|+||||||.|+|++.+|... .|.++||+.| .+|+++.|.++++ .||.|.+|||....
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil~H 457 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIEFH 457 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSHHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCchhH
Confidence 999999999655466789999999999999999752 6899999999 8999999999999 79999999997543
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.70 E-value=1.3e-15 Score=165.07 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=154.0
Q ss_pred eeEEEEcCCCC---------CCeEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCCCCCCCc----ccccccCCCCe
Q 008066 54 HNTITVNGMYP---------GPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAWADGPEF----VTQCPIRPGMS 119 (579)
Q Consensus 54 ~~~~~~ng~~p---------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~ 119 (579)
...++|||+.. -|+|+|++|+++|+||.|.... ...+|++|...... ..||.+- +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVI-EVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEE-ecCCccccceeeeeEEEcccce
Confidence 46889999853 1899999999999999999864 56788888654432 2688532 34567999999
Q ss_pred EEEEEEecCCCcceeeeeccccc---c-cceeeeEEEeCCCCCCCCCCCC-----CCceeEEee-eeccCC-hH--HHHH
Q 008066 120 YTYRFTIQGQEGTLWWHAHSSWL---R-ATVYGALIIHPKEGSSYPFPKP-----KRETPILLG-EWWDAN-PI--DVVR 186 (579)
Q Consensus 120 ~~y~f~~~~~~Gt~~yH~h~~~~---~-~Gl~G~liV~~~~~~~~~~~~~-----~~e~~l~~~-d~~~~~-~~--~~~~ 186 (579)
++..++++..+|.||.+++.... . .|+..+++.........|.... ..+..|.-. ...... .. ....
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 99999985567999999985421 1 1443344433222111111000 000000000 000000 00 0000
Q ss_pred Hh-hhCCCCCCCCceEEEcCCCCCCCCC-------------C--CCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCe
Q 008066 187 QA-TRTGAAPNISDAYTINGQPGDLYNC-------------S--SQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQ 250 (579)
Q Consensus 187 ~~-~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~ 250 (579)
.. +..+.. .....|+|||+.+..-.- . ......+.++.|++++|+++| ...|+||||||.
T Consensus 350 ~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh~ 425 (521)
T 1v10_A 350 NLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGHN 425 (521)
T ss_dssp EEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSCC
T ss_pred EEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccce
Confidence 00 000000 011257899998632100 0 012356899999999999999 456799999999
Q ss_pred eEEEeeCCcc----cCceEEeEEEE-CcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 251 FTVVGADASY----LKPFTTSVIML-GPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 251 ~~via~DG~~----~~p~~~d~l~l-~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
|+|++.+|.. ..|.++||+.| .+|+++.|.++++ .||.|.+|||....
T Consensus 426 F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H 478 (521)
T 1v10_A 426 FDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWH 478 (521)
T ss_dssp EEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHH
T ss_pred EEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHH
Confidence 9999999875 26899999999 7999999999999 79999999997544
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.69 E-value=1.4e-15 Score=162.03 Aligned_cols=229 Identities=13% Similarity=0.159 Sum_probs=153.0
Q ss_pred eeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCC-----cccccccCCCCeEEEEEEe
Q 008066 53 THNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPE-----FVTQCPIRPGMSYTYRFTI 126 (579)
Q Consensus 53 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~-----~~~~~~i~PG~~~~y~f~~ 126 (579)
....+++||+. .|+|.|++|+ |+||.|... ....+|++|...... ..||.. .+....|.||||++..++.
T Consensus 210 ~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI-a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~ 285 (481)
T 3zx1_A 210 EGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV-GTDGGLIEKTIYKEELFLSPASRVEVLIDA 285 (481)
T ss_dssp CCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE-EETTEEEEEEEEESSEEECTTCEEEEEEEC
T ss_pred cCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE-EcCCCccCCceEeCeEEECCccEEEEEEEc
Confidence 45789999997 6999999999 999999986 567888888764332 268621 2456679999999999997
Q ss_pred cCCCcceeeeeccccccc---------ceeeeEEEeCCCC-CCC------CCCCCCCceeEEeeeeccCChHHHHHHhhh
Q 008066 127 QGQEGTLWWHAHSSWLRA---------TVYGALIIHPKEG-SSY------PFPKPKRETPILLGEWWDANPIDVVRQATR 190 (579)
Q Consensus 127 ~~~~Gt~~yH~h~~~~~~---------Gl~G~liV~~~~~-~~~------~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 190 (579)
.+.|+|...++...... ....-+.+...+. .+. +++..+....+.++.....- . .+..
T Consensus 286 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~-~----~~~~ 359 (481)
T 3zx1_A 286 -PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQM-H----GMMG 359 (481)
T ss_dssp -SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTT-T----TGGG
T ss_pred -CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhc-c----cccc
Confidence 56788777665322110 0111122221110 000 11112233334443211100 0 0000
Q ss_pred CCCCC---CCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEee--CCccc---C
Q 008066 191 TGAAP---NISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGA--DASYL---K 262 (579)
Q Consensus 191 ~g~~~---~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~--DG~~~---~ 262 (579)
.+... .....++|||+.+. ...+.+.++.|++++|+|+|.+ ...|+||||||+|+|++. ||... +
T Consensus 360 ~~~~~~~~~~~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~ 432 (481)
T 3zx1_A 360 KSEGELKIALASMFLINRKSYD------LKRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEF 432 (481)
T ss_dssp CCHHHHHHHHHTTEEETTBCCC------TTCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECSS
T ss_pred cccccccccccceeEECCEeCC------CCCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCccc
Confidence 00000 00024899999862 2346799999999999999976 667899999999999999 99865 4
Q ss_pred ceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 263 PFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 263 p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
+.+.|++.|.||+++.|.++++ .||.|.+|||....
T Consensus 433 ~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil~H 468 (481)
T 3zx1_A 433 RALRDTINVRPNEELRLRMKQD-FKGLRMYHCHILEH 468 (481)
T ss_dssp CCEESEEEECTTCEEEEEECCC-SCEEEEEEESSHHH
T ss_pred CcccceEEECCCCEEEEEEEcC-CCeeEEEEcCChHH
Confidence 6799999999999999999998 79999999997543
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.64 E-value=1.6e-14 Score=154.92 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=152.2
Q ss_pred eeeEEEEcCCC---------CCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCCc----ccccccCCCC
Q 008066 53 THNTITVNGMY---------PGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPEF----VTQCPIRPGM 118 (579)
Q Consensus 53 ~~~~~~~ng~~---------pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~~~~~i~PG~ 118 (579)
....++|||+- +-|.|+|++|+++++||.|... ....++++|...... ..||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTII-ETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEE-EeCCcccCCEEeeeEEEcCce
Confidence 45789999963 3479999999999999999875 456777777654332 2688532 3456799999
Q ss_pred eEEEEEEecCCCcceeeeecccccc----cceeeeEEEeCCCCCCCCCCCC-------CCceeEEeee-eccCCh---HH
Q 008066 119 SYTYRFTIQGQEGTLWWHAHSSWLR----ATVYGALIIHPKEGSSYPFPKP-------KRETPILLGE-WWDANP---ID 183 (579)
Q Consensus 119 ~~~y~f~~~~~~Gt~~yH~h~~~~~----~Gl~G~liV~~~~~~~~~~~~~-------~~e~~l~~~d-~~~~~~---~~ 183 (579)
|++..+++++.+|.||..+...... .|...+++.........|.... ..|..|.--+ ...... ..
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCC
Confidence 9999999865679999998643211 1332344433322111111000 0110000000 000000 00
Q ss_pred HHHHh-hhCCCCCCCCceEEEcCCCCCCCCC-----------C----CCCeeeEEEecCCEEEEEEeecCCCccEEEEEc
Q 008066 184 VVRQA-TRTGAAPNISDAYTINGQPGDLYNC-----------S----SQDTVVVPIDSGETNLLRVINSGLNQPLFFTIA 247 (579)
Q Consensus 184 ~~~~~-~~~g~~~~~~~~~liNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~ 247 (579)
..... ...+ .....|+|||+.+....- . .....++.++.|++|+|.|.|......|+||||
T Consensus 326 ~d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLH 402 (495)
T 3t6v_A 326 ADCNLNLSLG---FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLH 402 (495)
T ss_dssp SSEEEECCEE---EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEET
T ss_pred CcEEEEEEEE---ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeec
Confidence 00000 0000 011368899987632100 0 012346899999999999984344667899999
Q ss_pred CCeeEEEeeCCccc----CceEEeEEEECc-ccEEEEEEEcCCCCcceEEEEEecc
Q 008066 248 NHQFTVVGADASYL----KPFTTSVIMLGP-GQTTDVLIKGDQPPSRYYLAARAYA 298 (579)
Q Consensus 248 gh~~~via~DG~~~----~p~~~d~l~l~p-G~R~dv~v~~~~~~g~~~l~~~~~~ 298 (579)
||.|.|++.+|... .|...|++.|.+ |+.+.+.++++ +||.|.+|||...
T Consensus 403 Gh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~~ 457 (495)
T 3t6v_A 403 GHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHIDW 457 (495)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCHH
T ss_pred CCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecchh
Confidence 99999999988654 688999999997 99999999999 7999999999743
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.63 E-value=4.3e-14 Score=153.40 Aligned_cols=226 Identities=12% Similarity=0.124 Sum_probs=150.0
Q ss_pred eeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCCCCCCC----cccccccCCCCeEEEEEEecC
Q 008066 54 HNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAWADGPE----FVTQCPIRPGMSYTYRFTIQG 128 (579)
Q Consensus 54 ~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DGv~----~~~~~~i~PG~~~~y~f~~~~ 128 (579)
...++|||+. .|+|+|++|+++|+||.|.... ...++++|...... ..||.+ .+....|.||||++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVV-EIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEE-eccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4689999996 6999999999999999999864 56677777654332 168853 234567999999999999843
Q ss_pred C-Ccceeeeecccccc-------cceeeeEEEeCCCCCCCCCC-------------------------CCCCceeEEeee
Q 008066 129 Q-EGTLWWHAHSSWLR-------ATVYGALIIHPKEGSSYPFP-------------------------KPKRETPILLGE 175 (579)
Q Consensus 129 ~-~Gt~~yH~h~~~~~-------~Gl~G~liV~~~~~~~~~~~-------------------------~~~~e~~l~~~d 175 (579)
+ .|.||......... ....+..+++-......+.+ ..++.+.|.+.-
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57899988754221 01111222222211110100 001111111100
Q ss_pred eccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCC--------------C----CCCeeeEEEecCCEEEEEEeecC
Q 008066 176 WWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNC--------------S----SQDTVVVPIDSGETNLLRVINSG 237 (579)
Q Consensus 176 ~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~--------------~----~~~~~~~~v~~G~~~rlRliN~g 237 (579)
.. ......+++|||+.+....- . ......+.++.|++++|.|.|.+
T Consensus 325 --------------~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 325 --------------DN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp --------------EE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred --------------ec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 00 00112468999997632100 0 01134689999999999999987
Q ss_pred CCccEEEEEcCCeeEEEeeCCc-----------c---------cCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEec
Q 008066 238 LNQPLFFTIANHQFTVVGADAS-----------Y---------LKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAY 297 (579)
Q Consensus 238 ~~~~~~~~l~gh~~~via~DG~-----------~---------~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~ 297 (579)
...|+||||||.|+|++.++. + ..|.++||+.|.+|+.+.|.|+++ .||.|.+|||..
T Consensus 389 -~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 389 -TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp -SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred -CCCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 557899999999999998853 1 247899999999999999999998 799999999975
Q ss_pred cC
Q 008066 298 AS 299 (579)
Q Consensus 298 ~~ 299 (579)
..
T Consensus 467 ~H 468 (534)
T 1zpu_A 467 WH 468 (534)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.62 E-value=4.4e-14 Score=151.52 Aligned_cols=241 Identities=15% Similarity=0.170 Sum_probs=150.6
Q ss_pred eeeEEEEcCCC--------CCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCCc----ccccccCCCCe
Q 008066 53 THNTITVNGMY--------PGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPEF----VTQCPIRPGMS 119 (579)
Q Consensus 53 ~~~~~~~ng~~--------pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~ 119 (579)
....++|||+- +-|.|+|++|+++++||.|... ....+|++|...... ..||.+- +....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi-a~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII-EVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEE-EECCcccCceEeeeEEECCCcE
Confidence 35789999973 3479999999999999999876 456788888654432 2688532 34567999999
Q ss_pred EEEEEEecCCCcceeeeecccccc---c-ceeeeEEEeCCCCCCCCCCC------CCCceeEEee-eeccCC-h--HHHH
Q 008066 120 YTYRFTIQGQEGTLWWHAHSSWLR---A-TVYGALIIHPKEGSSYPFPK------PKRETPILLG-EWWDAN-P--IDVV 185 (579)
Q Consensus 120 ~~y~f~~~~~~Gt~~yH~h~~~~~---~-Gl~G~liV~~~~~~~~~~~~------~~~e~~l~~~-d~~~~~-~--~~~~ 185 (579)
++..+++++.+|.||..+...... . +..-+++.........|... ...|..|.-- ...... . ....
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSSBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCcccccccccccccccCCCcccCCCCc
Confidence 999999866679999987643111 1 22123333322211111100 0011000000 000000 0 0000
Q ss_pred HHh-hhCCCCCCCCceEEEcCCCCCCCCC-----------C----CCCeeeEEEecCCEEEEEEeec--CCCccEEEEEc
Q 008066 186 RQA-TRTGAAPNISDAYTINGQPGDLYNC-----------S----SQDTVVVPIDSGETNLLRVINS--GLNQPLFFTIA 247 (579)
Q Consensus 186 ~~~-~~~g~~~~~~~~~liNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRliN~--g~~~~~~~~l~ 247 (579)
... ...+ .....|+|||+.+....- . ......+.++.|++|+|.|.|. .....|+||||
T Consensus 324 ~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLH 400 (499)
T 3pxl_A 324 KAINMAFN---FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLH 400 (499)
T ss_dssp EEEECCEE---ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEET
T ss_pred EEEEEEEE---ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceec
Confidence 000 0000 011258899987631100 0 0123568999999999999942 23456799999
Q ss_pred CCeeEEEeeCCccc----CceEEeEEEECc---ccEEEEEEEcCCCCcceEEEEEecc
Q 008066 248 NHQFTVVGADASYL----KPFTTSVIMLGP---GQTTDVLIKGDQPPSRYYLAARAYA 298 (579)
Q Consensus 248 gh~~~via~DG~~~----~p~~~d~l~l~p---G~R~dv~v~~~~~~g~~~l~~~~~~ 298 (579)
||.|.|++.+|... .|...|++.|.+ |+.+.+.++++ +||.|.+|||...
T Consensus 401 Gh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~~ 457 (499)
T 3pxl_A 401 GHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHIDF 457 (499)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSHH
T ss_pred CCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCChh
Confidence 99999999888643 689999999986 99999999999 7999999999643
No 62
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.61 E-value=2e-14 Score=153.13 Aligned_cols=250 Identities=14% Similarity=0.144 Sum_probs=158.1
Q ss_pred EEEEEEEEEEeeecCc--------------eeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEe-CCcc--c
Q 008066 36 HHHDFVIQATPVKRLC--------------KTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHW-HGVR--Q 97 (579)
Q Consensus 36 ~~~~l~~~~~~~~~~g--------------~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~-HG~~--~ 97 (579)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++|+||.|... ....+++ +|.. +
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4566777654443332 344689999986 588876 67899999999976 4566777 5653 4
Q ss_pred cCCCCCCCCC-----cccccccCCCCeEEEEEEecCCCcceeeeecccccccce----ee----eEEEeC-----CCCCC
Q 008066 98 MRTAWADGPE-----FVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATV----YG----ALIIHP-----KEGSS 159 (579)
Q Consensus 98 ~~~~~~DGv~-----~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~Gl----~G----~liV~~-----~~~~~ 159 (579)
.. .||.. .+....|.||||++..+++ .+.+.|+.-+...... |+ +. .+-|.+ ....+
T Consensus 229 Ia---~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~P 303 (488)
T 3od3_A 229 IA---SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQM-GMAIAPFDKPHPVMRIQPIAISASGALP 303 (488)
T ss_dssp EE---ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSST-TTTSTTTTSCEEEEEEEEEEEECCCCCC
T ss_pred EE---eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCC-CcccccccCccceeEecccccCCCCCCC
Confidence 43 68842 2456779999999999998 5677887765432111 11 01 122221 11111
Q ss_pred C---CC---CC----CCCceeEEeee-eccCChHHHHH----Hhhh------------CCCC--------CCCCceEEEc
Q 008066 160 Y---PF---PK----PKRETPILLGE-WWDANPIDVVR----QATR------------TGAA--------PNISDAYTIN 204 (579)
Q Consensus 160 ~---~~---~~----~~~e~~l~~~d-~~~~~~~~~~~----~~~~------------~g~~--------~~~~~~~liN 204 (579)
. ++ +. ..+++.|.+.. +.......... ..+. .|.. ......++||
T Consensus 304 ~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~IN 383 (488)
T 3od3_A 304 DTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKIN 383 (488)
T ss_dssp SCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEET
T ss_pred cccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeEC
Confidence 0 11 11 11334444321 00000000000 0000 0100 0011247999
Q ss_pred CCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccC---ceEEeEEEECcccEEEEEE
Q 008066 205 GQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLK---PFTTSVIMLGPGQTTDVLI 281 (579)
Q Consensus 205 G~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~---p~~~d~l~l~pG~R~dv~v 281 (579)
|+.+. ...+.+.++.|++++|+|+|.+....|+||||||+|+|++.||.... +.++|++.|. |+++.|.|
T Consensus 384 G~~~~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~ 456 (488)
T 3od3_A 384 GQAFD------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLV 456 (488)
T ss_dssp TBCCC------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEE
T ss_pred CeeCC------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEE
Confidence 99873 23466899999999999999997677899999999999999998764 4589999999 99999999
Q ss_pred EcCC---CCcceEEEEEeccC
Q 008066 282 KGDQ---PPSRYYLAARAYAS 299 (579)
Q Consensus 282 ~~~~---~~g~~~l~~~~~~~ 299 (579)
++++ .+|.|++|||.+..
T Consensus 457 ~f~~~~~~~G~~m~HCH~l~H 477 (488)
T 3od3_A 457 KFNHDAPKEHAYMAHCHLLEH 477 (488)
T ss_dssp CBCSCCCGGGCEEEEESSHHH
T ss_pred EeccCCCCCCCEEEeCCchHH
Confidence 9974 35799999997643
No 63
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.61 E-value=3.7e-14 Score=154.97 Aligned_cols=214 Identities=17% Similarity=0.209 Sum_probs=140.4
Q ss_pred eEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCCCCCCC----cccccccCCCCeEEEEEEe-cCCCcceeeeeccc
Q 008066 67 TLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAWADGPE----FVTQCPIRPGMSYTYRFTI-QGQEGTLWWHAHSS 140 (579)
Q Consensus 67 ~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DGv~----~~~~~~i~PG~~~~y~f~~-~~~~Gt~~yH~h~~ 140 (579)
+|+|++|+++|+||.|.... ...+|++|...... ..||.+ .+....|.||||++..+++ ++.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV-EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE-EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE-EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 89999999999999999764 56788887654432 268843 2345679999999999998 44589999999865
Q ss_pred ccc-c--ceeeeEEEeCCCCCCCC---CCC-----------------------------CCCceeEEeeeeccCChHHHH
Q 008066 141 WLR-A--TVYGALIIHPKEGSSYP---FPK-----------------------------PKRETPILLGEWWDANPIDVV 185 (579)
Q Consensus 141 ~~~-~--Gl~G~liV~~~~~~~~~---~~~-----------------------------~~~e~~l~~~d~~~~~~~~~~ 185 (579)
... . ...+.|-.........+ .+. .++.+.|.+..
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~---------- 353 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQ---------- 353 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEE----------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEee----------
Confidence 311 1 12233333222210000 000 00111111100
Q ss_pred HHhhhCCCCCCCCceEEEcCCCCCC-----------------------------CC------CCC--CCeeeEEEecCCE
Q 008066 186 RQATRTGAAPNISDAYTINGQPGDL-----------------------------YN------CSS--QDTVVVPIDSGET 228 (579)
Q Consensus 186 ~~~~~~g~~~~~~~~~liNG~~~~~-----------------------------~~------~~~--~~~~~~~v~~G~~ 228 (579)
+ .......++|||+.+.. ++ |.. .....+.++.|++
T Consensus 354 ------~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 354 ------N-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ------E-EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ------c-cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 0 00011247788875411 00 000 0123588999999
Q ss_pred EEEEEeecCC-----CccEEEEEcCCeeEEEeeC-Ccc----------cCceEEeEEEECcccEEEEEEEcCCCCcceEE
Q 008066 229 NLLRVINSGL-----NQPLFFTIANHQFTVVGAD-ASY----------LKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYL 292 (579)
Q Consensus 229 ~rlRliN~g~-----~~~~~~~l~gh~~~via~D-G~~----------~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l 292 (579)
++|.|.|.+. ...|+||||||.|.|++.. |.+ ..|..+||+.|.+|+.+.|.++++ .||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEE
Confidence 9999999875 3468999999999999984 553 268899999999999999999999 7999999
Q ss_pred EEEeccC
Q 008066 293 AARAYAS 299 (579)
Q Consensus 293 ~~~~~~~ 299 (579)
|||....
T Consensus 506 HCHi~~H 512 (552)
T 1aoz_A 506 HCHIEPH 512 (552)
T ss_dssp EESSHHH
T ss_pred EeeehhH
Confidence 9997543
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.59 E-value=1.8e-13 Score=149.40 Aligned_cols=243 Identities=12% Similarity=0.101 Sum_probs=148.8
Q ss_pred eeEEEEcCCCC--------CCeEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCCCCCCC----cccccccCCCCeE
Q 008066 54 HNTITVNGMYP--------GPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAWADGPE----FVTQCPIRPGMSY 120 (579)
Q Consensus 54 ~~~~~~ng~~p--------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DGv~----~~~~~~i~PG~~~ 120 (579)
...++|||+.. -|+|+|++|+++|+||.|.... ...+|++|....... .||.+ .+....|.||||+
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 46789999973 3799999999999999999865 567888886543321 68864 2345679999999
Q ss_pred EEEEEecCCCcceeeeecc--ccc---c-cc-eeeeEEEeCCCCCCCCCCC----CC----CceeEE-eeeeccCChH--
Q 008066 121 TYRFTIQGQEGTLWWHAHS--SWL---R-AT-VYGALIIHPKEGSSYPFPK----PK----RETPIL-LGEWWDANPI-- 182 (579)
Q Consensus 121 ~y~f~~~~~~Gt~~yH~h~--~~~---~-~G-l~G~liV~~~~~~~~~~~~----~~----~e~~l~-~~d~~~~~~~-- 182 (579)
+..++++..+|.||..... ... . .. ..+.|....... ..|... .+ .+..+. +.........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999986568999998875 211 1 11 122222322211 111000 00 000000 0000000000
Q ss_pred -HHHHHhh-hCCCCCCCCceEEEcCCCCCCCCCCC-------------CCeeeEEEecCCEEEEEEeecCC----CccEE
Q 008066 183 -DVVRQAT-RTGAAPNISDAYTINGQPGDLYNCSS-------------QDTVVVPIDSGETNLLRVINSGL----NQPLF 243 (579)
Q Consensus 183 -~~~~~~~-~~g~~~~~~~~~liNG~~~~~~~~~~-------------~~~~~~~v~~G~~~rlRliN~g~----~~~~~ 243 (579)
....... ...........++|||+.+....-.. .....+.++.++.+++.++|... ...|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 0000000 00000112246899999763210000 01234777777777776776654 57889
Q ss_pred EEEcCCeeEEEeeCC---------cc------------cCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 244 FTIANHQFTVVGADA---------SY------------LKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 244 ~~l~gh~~~via~DG---------~~------------~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
||||||.|+|++.++ .. ..|.++||+.|.+|+++.|.|+++ .||.|.+|||....
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil~H 508 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIAWH 508 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCHHH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecchhH
Confidence 999999999999986 21 147799999999999999999999 79999999997544
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.58 E-value=2.3e-14 Score=152.34 Aligned_cols=212 Identities=15% Similarity=0.193 Sum_probs=143.9
Q ss_pred eeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEe--CC---c--cccCCCCCCCCC-----cccccccCCCC
Q 008066 52 KTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHW--HG---V--RQMRTAWADGPE-----FVTQCPIRPGM 118 (579)
Q Consensus 52 ~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~--HG---~--~~~~~~~~DGv~-----~~~~~~i~PG~ 118 (579)
.....++|||+. .|+|+|++| ++|+||.|... ....+|+ +| . .+.. .||.+ .+....|.|||
T Consensus 167 ~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via---~DG~~~~~P~~~~~l~l~pge 241 (448)
T 3aw5_A 167 FLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA---VDQGFLARPIEVRALFLAPAE 241 (448)
T ss_dssp CCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE---ETTEEEEEEEEESCEEECTTC
T ss_pred ccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE---eCCCccCCceEeceEEECCcc
Confidence 345789999996 699999999 99999999986 4677898 66 4 3333 68843 13456799999
Q ss_pred eEEEEEEecCCCcceeeeecccccc-c---ce----------eee--EEEeCCCCC--CCCC---C----CCCCceeEEe
Q 008066 119 SYTYRFTIQGQEGTLWWHAHSSWLR-A---TV----------YGA--LIIHPKEGS--SYPF---P----KPKRETPILL 173 (579)
Q Consensus 119 ~~~y~f~~~~~~Gt~~yH~h~~~~~-~---Gl----------~G~--liV~~~~~~--~~~~---~----~~~~e~~l~~ 173 (579)
|++..++.+ .|.||..++..... + ++ ... +.+...... +..+ + ....+..+.+
T Consensus 242 R~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l 319 (448)
T 3aw5_A 242 RAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFAL 319 (448)
T ss_dssp EEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEE
T ss_pred eEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEE
Confidence 999999874 47889887743210 0 01 111 222111110 0000 0 0011111222
Q ss_pred eeeccCChHHHHHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEE-EecCCEEEEEEeecCCCccEEEEEcCCeeE
Q 008066 174 GEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVP-IDSGETNLLRVINSGLNQPLFFTIANHQFT 252 (579)
Q Consensus 174 ~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~g~~~~~~~~l~gh~~~ 252 (579)
.. + ...|+|||+.+.. ..+.+. ++.|++++|+|.|.+....|+||||||.|+
T Consensus 320 ~~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~ 372 (448)
T 3aw5_A 320 SL----------------S-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMW 372 (448)
T ss_dssp EE----------------E-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBE
T ss_pred eC----------------C-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEE
Confidence 10 0 0248999998731 234466 899999999999998566789999999999
Q ss_pred EEeeCCccc---------------CceEEeEEEECcccEEEEEEEcC----CCCcceEEEEEeccC
Q 008066 253 VVGADASYL---------------KPFTTSVIMLGPGQTTDVLIKGD----QPPSRYYLAARAYAS 299 (579)
Q Consensus 253 via~DG~~~---------------~p~~~d~l~l~pG~R~dv~v~~~----~~~g~~~l~~~~~~~ 299 (579)
|++.+|... ++.++||+.|.||+++.|.+++. +.| |.+|||....
T Consensus 373 Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H 436 (448)
T 3aw5_A 373 IIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEH 436 (448)
T ss_dssp EEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHH
T ss_pred EEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHH
Confidence 999999764 23589999999999999996553 245 9999997543
No 66
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.57 E-value=1.7e-13 Score=149.81 Aligned_cols=234 Identities=19% Similarity=0.169 Sum_probs=147.9
Q ss_pred eeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEeCCc---------cccCCCCCCCCCc-----cc------c
Q 008066 53 THNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGV---------RQMRTAWADGPEF-----VT------Q 111 (579)
Q Consensus 53 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~---------~~~~~~~~DGv~~-----~~------~ 111 (579)
....++|||+. .|.|.|++| ++|+||.|... ....+++.|. .+.+ .||.+- +. .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccE
Confidence 34688999996 699999999 99999999986 4556666553 3443 688431 33 5
Q ss_pred cccCCCCeEEEEEEecCCCcc-eeeeecccccccc-----------eeeeEEEeCCCC-CCCCCCCC----------C--
Q 008066 112 CPIRPGMSYTYRFTIQGQEGT-LWWHAHSSWLRAT-----------VYGALIIHPKEG-SSYPFPKP----------K-- 166 (579)
Q Consensus 112 ~~i~PG~~~~y~f~~~~~~Gt-~~yH~h~~~~~~G-----------l~G~liV~~~~~-~~~~~~~~----------~-- 166 (579)
..|.||||++..+++.+.+|+ ++..........| ..--+.|..+.. .....+.. +
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 679999999999998655674 6666543211111 111244543321 11111110 0
Q ss_pred C-ceeEEee------------eeccCC--hHHHHHHhhhCC-----CCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecC
Q 008066 167 R-ETPILLG------------EWWDAN--PIDVVRQATRTG-----AAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSG 226 (579)
Q Consensus 167 ~-e~~l~~~------------d~~~~~--~~~~~~~~~~~g-----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 226 (579)
. ...+++. .|.... ....+ .....+ ........++|||+.+ ...+.++++.|
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~iNG~~~-------~~~~~~~v~~G 479 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV-QVPAEGVIQVTGADGRTKTYRRTAATF-------NDGLGFTIGEG 479 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETT
T ss_pred cceeEEeeccccccccccccceeecccccccccc-ccccccceeeeccCCceeEEEECCccC-------CCCCceEecCC
Confidence 0 0111110 011000 00000 000000 0000113588999976 24467999999
Q ss_pred CEEEEEEeecCCCccEEEEEcCCeeEEEeeCCc------------------------cc---CceEEeEEEECcccEEEE
Q 008066 227 ETNLLRVINSGLNQPLFFTIANHQFTVVGADAS------------------------YL---KPFTTSVIMLGPGQTTDV 279 (579)
Q Consensus 227 ~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~d~l~l~pG~R~dv 279 (579)
++++|+|+|.+ ...|+||||||.|+|++.+|. .. ++.++|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 99999999998 667899999999999987542 11 234799999999999999
Q ss_pred EEEcCCCCcceEEEEEeccCC
Q 008066 280 LIKGDQPPSRYYLAARAYASA 300 (579)
Q Consensus 280 ~v~~~~~~g~~~l~~~~~~~~ 300 (579)
.++++..||.|++|||.+...
T Consensus 559 ~~~~~~~pG~w~~HCHil~He 579 (612)
T 2g23_A 559 MGKFDGAYGRFMYHCHLLEHE 579 (612)
T ss_dssp EEECCSCCEEEEEEESSHHHH
T ss_pred EEEeCCCCccEEEEeCchhHh
Confidence 999997799999999986544
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.56 E-value=7.1e-14 Score=151.25 Aligned_cols=232 Identities=15% Similarity=0.092 Sum_probs=148.1
Q ss_pred eeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-CceEEeCCc-cccCCCCCCCCC-----cccccccCCCCeEEEEEE
Q 008066 53 THNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-NVTIHWHGV-RQMRTAWADGPE-----FVTQCPIRPGMSYTYRFT 125 (579)
Q Consensus 53 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~-~~~~~~~~DGv~-----~~~~~~i~PG~~~~y~f~ 125 (579)
....++|||+. .|.|.++.| ++|+||.|.... ...+|++|. ..... ..||.. .+....|.||||++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQI-GSDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEE-ccCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 35789999997 699999885 999999999875 467888775 33221 168832 145667999999999999
Q ss_pred ecCCCcceeee-eccc--cccc-ce-eeeEEEeCCC--CC--CCCCCCC------------CCceeEEeeeeccCChHHH
Q 008066 126 IQGQEGTLWWH-AHSS--WLRA-TV-YGALIIHPKE--GS--SYPFPKP------------KRETPILLGEWWDANPIDV 184 (579)
Q Consensus 126 ~~~~~Gt~~yH-~h~~--~~~~-Gl-~G~liV~~~~--~~--~~~~~~~------------~~e~~l~~~d~~~~~~~~~ 184 (579)
.++.+|.++.- .... +... .. ...+-..... .. ....+.. ..+..+.+....
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~------- 378 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ------- 378 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-------
Confidence 85557873332 1110 0000 11 1122222111 00 0001100 001112221100
Q ss_pred HHHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcc----
Q 008066 185 VRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASY---- 260 (579)
Q Consensus 185 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~---- 260 (579)
.......++|||+.+. ....+.++.|++++|.|.|.+ ...|+||||||.|+|++.+|..
T Consensus 379 ---------~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~-~~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 379 ---------DEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPT-RGTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp ---------CTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred ---------CCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCC-CCCcCEeEeCceEEEEEecCcccccc
Confidence 0011135789999862 224568999999999999988 4578999999999999987620
Q ss_pred -----------------cCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEec
Q 008066 261 -----------------LKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYK 317 (579)
Q Consensus 261 -----------------~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~ 317 (579)
-++.++|++.|.||+++.|.+++++.||.|.+|||.....+ .+..+.+++.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~------~GMm~~~~V~ 509 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHED------YDMMRPMDIT 509 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHT------TTCEEEEEEB
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhh------cCCceeEEEe
Confidence 02358999999999999999999657999999999765432 2345555554
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.52 E-value=1.8e-13 Score=148.19 Aligned_cols=239 Identities=17% Similarity=0.167 Sum_probs=148.3
Q ss_pred eeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-CceEEeCC---------ccccCCCCCCCCC-----cccccccCCCC
Q 008066 54 HNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-NVTIHWHG---------VRQMRTAWADGPE-----FVTQCPIRPGM 118 (579)
Q Consensus 54 ~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG---------~~~~~~~~~DGv~-----~~~~~~i~PG~ 118 (579)
...+++||+. .|.|.|+.| ++|+||.|.... ...++++| +.+.. .||.. .+....|.|||
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa---~DG~~~~~P~~~~~l~l~pge 275 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA---SDSGLLEHPADTSLLYISMAE 275 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE---ETTEEEEEEEEESCEEECTTC
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE---eCCCcccCceEeceEEECCcc
Confidence 5689999985 799999985 999999999864 46788855 34444 68742 24566799999
Q ss_pred eEEEEEEecCCCc-ceeeeecccccc--------cceeeeEEEeCCCCC----CCCCCCCCCceeEEeeeeccCChHHHH
Q 008066 119 SYTYRFTIQGQEG-TLWWHAHSSWLR--------ATVYGALIIHPKEGS----SYPFPKPKRETPILLGEWWDANPIDVV 185 (579)
Q Consensus 119 ~~~y~f~~~~~~G-t~~yH~h~~~~~--------~Gl~G~liV~~~~~~----~~~~~~~~~e~~l~~~d~~~~~~~~~~ 185 (579)
|++..++....+| +||......... ....+.+-....... ....+..-.... ... ......
T Consensus 276 R~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~-~~~~~~--- 349 (534)
T 3abg_A 276 RYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPS-PTTNTP--- 349 (534)
T ss_dssp EEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCC-CCCCCC---
T ss_pred EEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCC-Cccccc---
Confidence 9999999855578 587765321000 011122222211110 000000000000 000 000000
Q ss_pred HHhhhCCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEee-CCc---cc
Q 008066 186 RQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGA-DAS---YL 261 (579)
Q Consensus 186 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~-DG~---~~ 261 (579)
.... -+. ....|+|||+.+... .....+.++.|++++|.|.|.+....|+||||||.|+|++. +|. ..
T Consensus 350 ~~~~-~~~---~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~ 421 (534)
T 3abg_A 350 RQFR-FGR---TGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTV 421 (534)
T ss_dssp EEEE-CSC---CCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCC
T ss_pred eEEE-Eec---cCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcC
Confidence 0000 000 112478999976311 11234689999999999999986667899999999999998 663 11
Q ss_pred ---CceEEeEEEECcccEEEEEEE-cCCCCcceEEEEEeccCCCCCCCCCcceEEEEEecc
Q 008066 262 ---KPFTTSVIMLGPGQTTDVLIK-GDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKS 318 (579)
Q Consensus 262 ---~p~~~d~l~l~pG~R~dv~v~-~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~ 318 (579)
+..++||+.|.||+++.|.++ ++ .||.|.+|||.....+ .+..+.+++..
T Consensus 422 ~~~~~~~rDTV~v~pg~~v~I~~~~ad-npG~w~~HCHil~H~d------~GMm~~~~V~~ 475 (534)
T 3abg_A 422 MPYESGLKDVVWLGRRETVVVEAHYAP-FPGVYMFHCHNLIHED------HDMMAAFNATV 475 (534)
T ss_dssp CSGGGSCBSEECCCSSEEEEEEEECCS-CCEEEEEEESCHHHHH------TTCEEEEEECS
T ss_pred CccccCCcCeEEcCCCCEEEEEEEECC-CCccEEEecChHHHHh------cCCceEEEEEe
Confidence 125789999999999999999 55 7999999999765432 23455666654
No 69
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.51 E-value=6.7e-15 Score=124.25 Aligned_cols=89 Identities=20% Similarity=0.225 Sum_probs=69.4
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCC--CCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecc
Q 008066 62 MYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRT--AWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS 139 (579)
Q Consensus 62 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~--~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~ 139 (579)
++++|+|++++||+|+ ++|.+..++++|+||...... ..+||.+ .+++.|.||++++|.|++++++|+||||||.
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 5678999999999975 679988999999999865431 0123322 3467899999999999754789999999994
Q ss_pred cccccceeeeEEEeC
Q 008066 140 SWLRATVYGALIIHP 154 (579)
Q Consensus 140 ~~~~~Gl~G~liV~~ 154 (579)
+ ..+||.|.|+|++
T Consensus 92 H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 92 H-RGAGMVGKITVEG 105 (105)
T ss_dssp T-GGGTCEEEEEECC
T ss_pred c-hhcCCEEEEEEcC
Confidence 3 2359999999964
No 70
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.40 E-value=3.4e-11 Score=130.81 Aligned_cols=240 Identities=13% Similarity=0.074 Sum_probs=145.6
Q ss_pred eeEEEEcCCCC----------------CCeEEEecCCEEEEEEEeCCCC-CceEEeCCccccCCCCCCCCC----ccccc
Q 008066 54 HNTITVNGMYP----------------GPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQMRTAWADGPE----FVTQC 112 (579)
Q Consensus 54 ~~~~~~ng~~p----------------gP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~~~~~~DGv~----~~~~~ 112 (579)
...++|||+.. .++|+|++|+++++||.|.... ...++++|..+... ..||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VI-a~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVI-ANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEE-EeCCccCCceEeeEE
Confidence 45789999742 3799999999999999999864 45778877654432 268854 23456
Q ss_pred ccCCCCeEEEEEEecCCCcceeeeeccccc-----ccceeeeEEEeCCCCCCCCCCCCCCcee-EEeee--eccCC--hH
Q 008066 113 PIRPGMSYTYRFTIQGQEGTLWWHAHSSWL-----RATVYGALIIHPKEGSSYPFPKPKRETP-ILLGE--WWDAN--PI 182 (579)
Q Consensus 113 ~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~-----~~Gl~G~liV~~~~~~~~~~~~~~~e~~-l~~~d--~~~~~--~~ 182 (579)
.|.||||++..+++++.+|.||........ ..+..-+++.........|.... .+.. ..+.+ ..... ..
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCC
Confidence 799999999999986678999999875421 11111233333222111111000 0000 00000 00000 00
Q ss_pred HHHHHh-----hhCCCCCCCCceEEEcCCCCCC-CC---------CCC---CCeeeEEE----ecCCEEEEEEeecC-CC
Q 008066 183 DVVRQA-----TRTGAAPNISDAYTINGQPGDL-YN---------CSS---QDTVVVPI----DSGETNLLRVINSG-LN 239 (579)
Q Consensus 183 ~~~~~~-----~~~g~~~~~~~~~liNG~~~~~-~~---------~~~---~~~~~~~v----~~G~~~rlRliN~g-~~ 239 (579)
...... ..-+ ......+.|||..+.. .. ... .....+.+ +.|++|.|.|-|.+ ..
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 000000 0000 0112357899987521 00 000 01112334 45999999999987 23
Q ss_pred ccEEEEEcCCeeEEEeeCCc------------ccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEecc
Q 008066 240 QPLFFTIANHQFTVVGADAS------------YLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYA 298 (579)
Q Consensus 240 ~~~~~~l~gh~~~via~DG~------------~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~ 298 (579)
..|+||||||.|.|++.+.. +..|...|++.+.+|+.+.+.++++ +||.|.+|||...
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~~ 530 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIAW 530 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSHH
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcHH
Confidence 57899999999999988432 2358899999999999999999999 7999999999643
No 71
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.39 E-value=1.6e-12 Score=110.91 Aligned_cols=104 Identities=24% Similarity=0.194 Sum_probs=79.2
Q ss_pred EEEEEEEEEee-----ecCceeeeE-EEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccc
Q 008066 37 HHDFVIQATPV-----KRLCKTHNT-ITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVT 110 (579)
Q Consensus 37 ~~~l~~~~~~~-----~~~g~~~~~-~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~ 110 (579)
.|.+.+.+... ..+|..... ..+|+++++|.|++++||+|+++++|.... +||+..... |+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~---- 69 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV---- 69 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE----
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc----
Confidence 45665555433 234555555 488888988999999999999999999865 455543321 22
Q ss_pred ccccCCCCeEEEEEEecCCCcceeeeecccccccceeeeEEEeC
Q 008066 111 QCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHP 154 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~Gl~G~liV~~ 154 (579)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 4569999999999986 899999999998776657999999964
No 72
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.34 E-value=4.1e-11 Score=132.97 Aligned_cols=235 Identities=16% Similarity=0.095 Sum_probs=137.8
Q ss_pred eeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-CceEEeCC---------ccccCCCCCCCCC-----------cccc
Q 008066 53 THNTITVNGMYPGPTLEVNNGDTLVVKVTNKARY-NVTIHWHG---------VRQMRTAWADGPE-----------FVTQ 111 (579)
Q Consensus 53 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG---------~~~~~~~~~DGv~-----------~~~~ 111 (579)
....+++||+. .|.+.++. .++|+||.|.... ...+.+-+ +.+.+ .||.. .++.
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCcccccE
Confidence 35678999986 69998865 5899999998753 33444432 33443 58731 1235
Q ss_pred cccCCCCeEEEEEEecCCCcceeeeecccccc--------cce----eeeEEEeCCCC-CCCCCCC--------CC----
Q 008066 112 CPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR--------ATV----YGALIIHPKEG-SSYPFPK--------PK---- 166 (579)
Q Consensus 112 ~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~--------~Gl----~G~liV~~~~~-~~~~~~~--------~~---- 166 (579)
..|.||||++..++..+..|.+|+-....... .+. .-.+.+..... .....+. ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 67999999999999866666665543321110 000 01122222211 0000000 00
Q ss_pred Cce-eEEeeeeccCC-------------hHHHHHHhhh-----CCCCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCC
Q 008066 167 RET-PILLGEWWDAN-------------PIDVVRQATR-----TGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGE 227 (579)
Q Consensus 167 ~e~-~l~~~d~~~~~-------------~~~~~~~~~~-----~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~ 227 (579)
... ......-.... .......... ..........+.+||+.+ .....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-------~~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF-------NDGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC-------CCCcceEeCCCC
Confidence 000 01110000000 0000000000 000111223567888765 234568899999
Q ss_pred EEEEEEeecCCCccEEEEEcCCeeEEEeeCCccc---------------------------CceEEeEEEECcccEEEEE
Q 008066 228 TNLLRVINSGLNQPLFFTIANHQFTVVGADASYL---------------------------KPFTTSVIMLGPGQTTDVL 280 (579)
Q Consensus 228 ~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~---------------------------~p~~~d~l~l~pG~R~dv~ 280 (579)
+++|.|.|.+. ..|+||||||.|+|++.+|... ++.++||+.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSS-SCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCCC-CCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 99999999984 5679999999999999876422 2335899999999999999
Q ss_pred EEcCCCCcceEEEEEeccCC
Q 008066 281 IKGDQPPSRYYLAARAYASA 300 (579)
Q Consensus 281 v~~~~~~g~~~l~~~~~~~~ 300 (579)
+++.+.||.|.+|||.+...
T Consensus 560 ~rfadnpG~w~~HCHil~He 579 (612)
T 3gyr_A 560 GKFDGAYGRFMYHCHLLEHE 579 (612)
T ss_dssp EECCSCCEEEEEEESSHHHH
T ss_pred EEeCCCCcceEEcCCChHHH
Confidence 99665899999999986543
No 73
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.33 E-value=4.3e-12 Score=114.22 Aligned_cols=98 Identities=16% Similarity=0.210 Sum_probs=70.4
Q ss_pred ceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCC------CCcc-cccccCCCC--eEE
Q 008066 51 CKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADG------PEFV-TQCPIRPGM--SYT 121 (579)
Q Consensus 51 g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG------v~~~-~~~~i~PG~--~~~ 121 (579)
|...+.+.++|. ++|+|+|++||+|+++++|... ...|.+.+...+.++.+. .++. ....|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 455556677776 5799999999999999999733 335555555444333221 1000 012689999 999
Q ss_pred EEEEecCCCcceeeeeccccccc-ceeeeEEEe
Q 008066 122 YRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIH 153 (579)
Q Consensus 122 y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~ 153 (579)
|.|++ ++|+||||||..++.. ||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99974 9999999999877665 999999984
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=2.7e-11 Score=130.57 Aligned_cols=96 Identities=23% Similarity=0.324 Sum_probs=74.8
Q ss_pred CceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCC
Q 008066 50 LCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQ 129 (579)
Q Consensus 50 ~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~ 129 (579)
+++...+|++|+++++|+|++++||+|+++|+|.+...-. +||+.+.. .|+ ...+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4578889999999999999999999999999998653111 35555432 232 2579999999999986 89
Q ss_pred Ccceeeeeccc-c-cccceeeeEEEeCCC
Q 008066 130 EGTLWWHAHSS-W-LRATVYGALIIHPKE 156 (579)
Q Consensus 130 ~Gt~~yH~h~~-~-~~~Gl~G~liV~~~~ 156 (579)
+|+||||||.. + .-.||.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 1 113999999999764
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.14 E-value=1.7e-10 Score=97.00 Aligned_cols=77 Identities=21% Similarity=0.347 Sum_probs=62.0
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccc
Q 008066 62 MYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW 141 (579)
Q Consensus 62 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~ 141 (579)
.+..+.|++++||+|+ +.|..+.++++|+++. .||.....+..+.||++++|.| +++|+|||||+.|.
T Consensus 29 ~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~ 96 (105)
T 2ov0_A 29 KYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP 96 (105)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 4556899999999965 4699888999999852 3555444555699999999988 58999999998865
Q ss_pred cccceeeeEEEe
Q 008066 142 LRATVYGALIIH 153 (579)
Q Consensus 142 ~~~Gl~G~liV~ 153 (579)
||.|.|+|+
T Consensus 97 ---gM~G~i~V~ 105 (105)
T 2ov0_A 97 ---FMRGKVVVE 105 (105)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.11 E-value=1.4e-10 Score=97.39 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=65.9
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe-
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVA- 533 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a- 533 (579)
+.+.++.|++|+|+ |.. ...|++|+||..+... .|. + .+....++..++||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~---~g~-----~------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA---SKE-----L------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG---CHH-----H------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc---ccc-----c------cccccccccccCCCCeEEEEEecC
Confidence 46789999999874 632 5689999999866321 000 0 00112578899999999999998
Q ss_pred cCceeEEEEecchhhHHccceEEEEEec
Q 008066 534 DNPGVWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 534 dnpG~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
+.||.|.|||| .|..+||++.+.|.+
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 89999999999 799999999999853
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.08 E-value=1.1e-10 Score=103.61 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=71.4
Q ss_pred eeEEeecCcEEEEEEecCCCCCCC-CCCeeeeccceEEE--------EecC-CCCCCCCCCCCCCCCCCCcceeEEeCCC
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPE-NHPIHIHGYDFYII--------AEGF-GNFNPKTDTSKFNLVDPPLRNTVGVPVG 524 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~-~HP~HlHG~~F~vv--------~~g~-g~~~~~~~~~~~~~~~p~~rDTv~vp~~ 524 (579)
..+.++.|++|+|++.|.+ .. .|.||+|+....+. ..+. ..+.+.. ....++||..|.||
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCC
Confidence 4578999999999999954 45 89999998643110 0000 0111110 12357899999999
Q ss_pred cEEEEEEEecCceeEEEEecchhhHHccceEEEEEe
Q 008066 525 GWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 525 g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
....+.|.+++||.|.||||+..|.+ ||+..++|.
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999873
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.92 E-value=2.5e-09 Score=89.97 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=60.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCC----cccccccCCCCeEEEEEEecCCCcceeeeecccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPE----FVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW 141 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~----~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~ 141 (579)
+.|++++||+|++ .|....++++|+|+..... .+|.. ......+.||++++|.|+.++++|+|||||+ ..
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 7999999999755 5887778899988754321 12210 0122358999999999964478999999999 22
Q ss_pred cccceeeeEEEeC
Q 008066 142 LRATVYGALIIHP 154 (579)
Q Consensus 142 ~~~Gl~G~liV~~ 154 (579)
..+||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3349999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.87 E-value=1.3e-08 Score=89.99 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=65.0
Q ss_pred CCCCeEEEecCCEEEEEEEeCCCC-CceEEeCCcccc--------------CCCCC-CCCCc--ccccccCCCCeEEEEE
Q 008066 63 YPGPTLEVNNGDTLVVKVTNKARY-NVTIHWHGVRQM--------------RTAWA-DGPEF--VTQCPIRPGMSYTYRF 124 (579)
Q Consensus 63 ~pgP~i~v~~Gd~v~v~l~N~l~~-~~siH~HG~~~~--------------~~~~~-DGv~~--~~~~~i~PG~~~~y~f 124 (579)
+--+.|+|++||+|+++|+|.... +++++.++.... ...+. ++.+. .....|.||+++++.|
T Consensus 32 F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f 111 (139)
T 2aan_A 32 FDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTF 111 (139)
T ss_dssp BSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEE
Confidence 333799999999999999999877 888888874210 00000 01000 0122489999999999
Q ss_pred EecCCCcceeeeecccccccceeeeEEEe
Q 008066 125 TIQGQEGTLWWHAHSSWLRATVYGALIIH 153 (579)
Q Consensus 125 ~~~~~~Gt~~yH~h~~~~~~Gl~G~liV~ 153 (579)
++ +++|+|+||||..+...||.|.|+|.
T Consensus 112 ~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 112 TA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 86 79999999999766555999999984
No 80
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.83 E-value=7.9e-09 Score=90.39 Aligned_cols=77 Identities=14% Similarity=0.238 Sum_probs=56.1
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccc
Q 008066 62 MYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW 141 (579)
Q Consensus 62 ~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~ 141 (579)
.+-.+.|++++||+|++ .|....++++++.... +|........+.||++++|.| +++|+|+|+|-.|.
T Consensus 56 ~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~ 123 (132)
T 3c75_A 56 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 123 (132)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc
Confidence 34337999999999764 5887777777765321 122222223589999999988 58999999998754
Q ss_pred cccceeeeEEEe
Q 008066 142 LRATVYGALIIH 153 (579)
Q Consensus 142 ~~~Gl~G~liV~ 153 (579)
||.|.|+|+
T Consensus 124 ---gM~G~I~V~ 132 (132)
T 3c75_A 124 ---FMRGKVIVE 132 (132)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.79 E-value=1.1e-08 Score=86.01 Aligned_cols=85 Identities=13% Similarity=0.124 Sum_probs=62.8
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe-
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVA- 533 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a- 533 (579)
..+.++.|++|+|+ |.+ ...|++|+|+..+.. ..|. +. ....+|++.+.||....+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~---~~g~-----~~------~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA---KSAD-----LA------KSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT---CCHH-----HH------HHHCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc---cccc-----cc------hhccccceeeCCCCEEEEEEecC
Confidence 45789999999986 532 468999999864310 0000 00 0011467789999999999988
Q ss_pred cCceeEEEEecchhhHHccceEEEEEe
Q 008066 534 DNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 534 dnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
+.||.|.|||| .|.++||.+.+.|.
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999985
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.74 E-value=2.9e-08 Score=82.40 Aligned_cols=73 Identities=11% Similarity=0.107 Sum_probs=59.3
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
..|++++||+|++.++|....++++...+.... ..+.||++.++.|+. +++|+|.|+|..|. ..|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~H~-~~g 92 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRYHL-LKG 92 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcccc-CCC
Confidence 689999999999999999877777766554321 248999999999985 89999999997432 249
Q ss_pred eeeeEEEe
Q 008066 146 VYGALIIH 153 (579)
Q Consensus 146 l~G~liV~ 153 (579)
|.|.|+|+
T Consensus 93 M~G~i~Ve 100 (100)
T 4hci_A 93 MEGKVIVK 100 (100)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999995
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.65 E-value=6.9e-08 Score=79.70 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=57.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCC-CCcccccccCCCCeEEEEEEecCCCcceeeeeccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADG-PEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA 144 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG-v~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~ 144 (579)
+.|++++||+|+ ++|....++++|+|+...+.. .|. ........+.||+++++.| +++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEe---CCCeEEEEEcCCc-ccc
Confidence 789999999865 589887899999998543211 111 0001123589999999988 3899999999933 234
Q ss_pred ceeeeEEEe
Q 008066 145 TVYGALIIH 153 (579)
Q Consensus 145 Gl~G~liV~ 153 (579)
||.|.|+|.
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.64 E-value=8.2e-08 Score=84.94 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=71.0
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeecc--ceEEEE-e----c-CCCCCCCCCCCCCCCCCCCcceeEEeCCCcE
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGY--DFYIIA-E----G-FGNFNPKTDTSKFNLVDPPLRNTVGVPVGGW 526 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~--~F~vv~-~----g-~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~ 526 (579)
..+.++.|++|+|++.|.+ .+...|.||++.. ++.-+. . + ...|-+.. -....+++|..|.+|..
T Consensus 33 ~~i~v~~G~tV~~~~~N~~-~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~ 105 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQN-NLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGES 105 (140)
T ss_dssp SEEEEETTCEEEEEEEECC-SSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEE
T ss_pred CeEEECCCCEEEEEEECCC-CCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCce
Confidence 4578999999999999932 1257999999842 121000 0 0 00000000 01234678999999999
Q ss_pred EEEEEEecCceeEEEEecchhhHHccceEEEEEe
Q 008066 527 AVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 527 v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
..+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 106 ~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 106 GSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999999885
No 85
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.61 E-value=2.2e-07 Score=82.08 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=63.2
Q ss_pred CCeEEEecCCEEEEEEEe--CCCCCceEEeCCcc------------ccCC-CC---CCCCCc-ccccccCCCCeEEEEEE
Q 008066 65 GPTLEVNNGDTLVVKVTN--KARYNVTIHWHGVR------------QMRT-AW---ADGPEF-VTQCPIRPGMSYTYRFT 125 (579)
Q Consensus 65 gP~i~v~~Gd~v~v~l~N--~l~~~~siH~HG~~------------~~~~-~~---~DGv~~-~~~~~i~PG~~~~y~f~ 125 (579)
-+.|+|++||+|+++++| .....++++.+... .... .+ .|.... .....|.||++.++.|+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 379999999999999999 66678888776311 0000 00 011000 01135899999999998
Q ss_pred ecCCCcceeeeeccccccc-ceeeeEEEeC
Q 008066 126 IQGQEGTLWWHAHSSWLRA-TVYGALIIHP 154 (579)
Q Consensus 126 ~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~ 154 (579)
+ +.+|+|+|||+..+... ||.|.|+|.|
T Consensus 112 ~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 112 T-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp C-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred e-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 7 78999999999866554 9999999974
No 86
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.56 E-value=2e-07 Score=76.92 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=59.5
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCc-ceeEEeCCCcEEEEEEEe
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPL-RNTVGVPVGGWAVIRFVA 533 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~v~irf~a 533 (579)
..+.++.|++|+|+ |. +...|.+|+++..+- +. ..+.+ .|+..+.+|....++|
T Consensus 19 ~~i~v~~G~~V~~~--n~---~~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NN---KLSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp SEEEECTTCEEEEE--EC---SSCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--
T ss_pred CEEEECCCCEEEEE--EC---CCCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--
Confidence 35789999999987 53 246899999874321 00 00111 5788999999888877
Q ss_pred cCceeEEEEecchhhHHccceEEEEEe
Q 008066 534 DNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 534 dnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
+.||.|.|||| .|..+||.+.+.|+
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 79999999999 79999999999873
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.56 E-value=1.4e-07 Score=77.85 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=56.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
+.|++++||+|++ .|....+++++.++...++. ..++.. .....+.||+++++.| +++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999999664 58777789999887432210 000000 1234589999999988 5899999999933 2349
Q ss_pred eeeeEEEe
Q 008066 146 VYGALIIH 153 (579)
Q Consensus 146 l~G~liV~ 153 (579)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 88
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.54 E-value=2.3e-07 Score=76.47 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=60.2
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+| .|.+ ...|.+|+|+..+ ...++. ...++|+..+.+|....++| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~------p~~~~~----------~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNA---GFPHNIVFDEDAI------PSGVNA----------DAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECS---SCCEEEEECGGGS------CTTCCH----------HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCC------CCcccc----------ccccccceecCCCCEEEEEe--C
Confidence 4578999999998 4532 5689999997532 000000 01246889999999888866 5
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||| .|.++||.+.+.|.
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999873
No 89
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.53 E-value=2.2e-07 Score=75.44 Aligned_cols=73 Identities=19% Similarity=0.322 Sum_probs=54.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
+.|++++||+|+ +.|....+++++.++... + ......+.||+++++.| +++|+|+|||+.+ ..+|
T Consensus 19 ~~i~v~~Gd~V~--~~n~~~~~H~v~~~~~~~----~-----~~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQ--WVNNKLAPHNVVVEGQPE----L-----SHKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGAG 83 (91)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEETTCGG----G-----CEEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEE--EEECCCCCcEEEEeCCCc----c-----CcccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccCC
Confidence 689999999976 458777789998887210 0 01223589999988877 6899999999943 2249
Q ss_pred eeeeEEEe
Q 008066 146 VYGALIIH 153 (579)
Q Consensus 146 l~G~liV~ 153 (579)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 90
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.46 E-value=4e-07 Score=73.87 Aligned_cols=73 Identities=19% Similarity=0.320 Sum_probs=57.7
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+ |. +...|.+|+++.. +...++..+.+|+...+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~---~~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NN---KLAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--EC---SSCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--EC---CCCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--C
Confidence 35789999999986 43 2468999988720 1124778899998877776 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||| .|...||.+.+.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999873
No 91
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.43 E-value=5e-07 Score=74.32 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=54.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc--ccccccCCCCeEEEEEEecCCCcceeeeecccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF--VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR 143 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~--~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~ 143 (579)
+.|++++||+| ++.|....+++++.++.... +|..+ .....+.||+++++.| +++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999995 55687666788777764321 11100 0123589999999987 6899999999933 22
Q ss_pred cceeeeEEEe
Q 008066 144 ATVYGALIIH 153 (579)
Q Consensus 144 ~Gl~G~liV~ 153 (579)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 4999999984
No 92
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.42 E-value=9.4e-07 Score=72.96 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=55.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc------ccccccCCCCeEEEEEEecCCCcceeeeecc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF------VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS 139 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~------~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~ 139 (579)
+.|++++||+| +++|....+++++.++...+ +|... .....+.||+++++.| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 68999999985 55888777888888864321 22110 1113589999999988 489999999993
Q ss_pred cccccceeeeEEEe
Q 008066 140 SWLRATVYGALIIH 153 (579)
Q Consensus 140 ~~~~~Gl~G~liV~ 153 (579)
| ..+||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 2 234999999984
No 93
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.42 E-value=5.1e-07 Score=75.01 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=54.3
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCC--CCCCCCCcc--cccccCCCCeEEEEEEecCCCcceeeeecccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRT--AWADGPEFV--TQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW 141 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~--~~~DGv~~~--~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~ 141 (579)
+.|++++||+|+ +.|....+++++.+.-..... ..++..+++ ....+.||+++++.| +++|+|+|||+ ..
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 789999999976 568876788888763100000 000000111 223589999999887 68999999999 22
Q ss_pred cccceeeeEEEe
Q 008066 142 LRATVYGALIIH 153 (579)
Q Consensus 142 ~~~Gl~G~liV~ 153 (579)
..+||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 335999999984
No 94
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.41 E-value=4.5e-07 Score=78.19 Aligned_cols=76 Identities=12% Similarity=0.181 Sum_probs=52.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
+.|++++||+|++.+.|. ++++..+.-. +-||. ....+.||++++|.| +.+|+|||||..| ...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~---~~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGA---ETWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTC---CCCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977665553 4444433211 11222 112457999998888 5899999999854 2359
Q ss_pred eeeeEEEeCCC
Q 008066 146 VYGALIIHPKE 156 (579)
Q Consensus 146 l~G~liV~~~~ 156 (579)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999998754
No 95
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.40 E-value=1.1e-06 Score=72.54 Aligned_cols=77 Identities=13% Similarity=0.237 Sum_probs=55.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc------ccccccCCCCeEEEEEEecCCCcceeeeecc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF------VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS 139 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~------~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~ 139 (579)
+.|++++||+|+ ++|....+++++.++...+ +|... .....+.||+++++.| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 689999999865 5888777888887764221 12110 0113589999999888 489999999993
Q ss_pred cccccceeeeEEEe
Q 008066 140 SWLRATVYGALIIH 153 (579)
Q Consensus 140 ~~~~~Gl~G~liV~ 153 (579)
| ..+||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 234999999984
No 96
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.40 E-value=9.9e-07 Score=74.66 Aligned_cols=75 Identities=21% Similarity=0.360 Sum_probs=58.2
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
+.+.++.|++|+|++.|.. ...|-|++... .-+..++||....+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKS---PISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECC---CCeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 4678999999999999953 23444433321 1256799999999999999
Q ss_pred CceeEEEEecchhhHHccceEEEEEec
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVEN 561 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~ 561 (579)
.||.|.||||+..|... |.+.+.|.+
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887554 999998853
No 97
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.39 E-value=8.2e-07 Score=76.17 Aligned_cols=75 Identities=12% Similarity=0.121 Sum_probs=52.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
..|++++||+|++.+.| .++++..+.- .+-+|. ....+.||++++|.| +++|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H~-~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPHF-GMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 69999999998777766 2344443321 111332 122367999999888 58999999999432 349
Q ss_pred eeeeEEEeCC
Q 008066 146 VYGALIIHPK 155 (579)
Q Consensus 146 l~G~liV~~~ 155 (579)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 98
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.37 E-value=8e-07 Score=76.15 Aligned_cols=75 Identities=9% Similarity=0.003 Sum_probs=52.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
..|++++||+|+ +.|.. .++++..+.... -+|. ....+.||++++|.| +.+|+|+|||..| ..+|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 699999999965 55554 566666653211 1222 122467999999988 5899999999743 2249
Q ss_pred eeeeEEEeCC
Q 008066 146 VYGALIIHPK 155 (579)
Q Consensus 146 l~G~liV~~~ 155 (579)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999864
No 99
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.37 E-value=5.4e-07 Score=74.13 Aligned_cols=79 Identities=18% Similarity=0.294 Sum_probs=58.9
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+ |. +...|.+++++..+ ..+ . ....+++..+.+|+...+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~---~~~~H~~~~~~~~~-----~~~-------~------~~~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MN---KVGPHNVIFDKVPA-----GES-------A------PALSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp SEEEECTTCEEEEE--EC---SSCCCCBEEEECCT-----TSC-------H------HHHCBCCCCCSCSCCEEEEC--C
T ss_pred CEEEECCCCEEEEE--EC---CCCCeEEEEeCCCC-----ccc-------c------ccccccceecCCCCEEEEEe--C
Confidence 35789999999887 53 24689999987644 000 0 00114667788888877776 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||+ .|.++||.+.+.|+
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 89999999999873
No 100
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.32 E-value=2e-06 Score=71.21 Aligned_cols=73 Identities=16% Similarity=0.321 Sum_probs=58.7
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|.++
T Consensus 28 ~~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPK 76 (100)
T ss_dssp SEEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCC
T ss_pred CEEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEecc
Confidence 3579999999999999953 4466666544322 34577888899999999
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|+|. .|...||.+.+.|+
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCceEEEECc--cccCCCCEEEEEEC
Confidence 9999999997 59999999999884
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.30 E-value=1.8e-06 Score=71.20 Aligned_cols=83 Identities=11% Similarity=0.119 Sum_probs=59.0
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+| .|.+ ...|.+|+++..|- .+ ++.. . ....+|++.+.+|....++| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p-----~g-~~~~------~--~~~~~~~~~~~~G~~~~~~f--~ 75 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNA---GFPHNDLFDKKEVP-----AG-VDVT------K--ISMPEEDLLNAPGEEYSVTL--T 75 (99)
T ss_dssp SEEEECTTEEEEE--EECS---SCCBCCEECTTSSC-----TT-CCHH------H--HSCCTTCCBCSTTCEEEEEE--C
T ss_pred CEEEECCCCEEEE--EECC---CCcceEEEeCCCCc-----cc-cccc------c--ccccccceeeCCCCEEEEEe--C
Confidence 3578999999988 4532 46899999985430 00 0000 0 01125667888998888876 5
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||+ .|.++||.+.+.|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 8999999999 79999999999873
No 102
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.29 E-value=1.8e-06 Score=74.65 Aligned_cols=88 Identities=10% Similarity=0.068 Sum_probs=59.0
Q ss_pred CeEEEecC-CEEEEEEEeCCCCC-----ceEE--eCCccc-------c-C--CCC---CCC-CCcccccccCCCCeEEEE
Q 008066 66 PTLEVNNG-DTLVVKVTNKARYN-----VTIH--WHGVRQ-------M-R--TAW---ADG-PEFVTQCPIRPGMSYTYR 123 (579)
Q Consensus 66 P~i~v~~G-d~v~v~l~N~l~~~-----~siH--~HG~~~-------~-~--~~~---~DG-v~~~~~~~i~PG~~~~y~ 123 (579)
..|.|++| |+|+|+|+|....+ +++- -+|... . + .++ .|. +-. ....|.||++.++.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~-~t~~l~pGet~svt 96 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIA-FTPIIGGGEKTSVK 96 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSE-ECCCBCTTCEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccccccee-eeeEECCCCEEEEE
Confidence 58999999 99999999987543 3332 222100 0 0 000 011 100 11248999999999
Q ss_pred EEec--CCCcceeeeecccccccceeeeEEEeC
Q 008066 124 FTIQ--GQEGTLWWHAHSSWLRATVYGALIIHP 154 (579)
Q Consensus 124 f~~~--~~~Gt~~yH~h~~~~~~Gl~G~liV~~ 154 (579)
|+++ .++|+|||.|-..+.+.||.|.|+|.+
T Consensus 97 f~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9863 289999999987776779999999963
No 103
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.26 E-value=4.5e-06 Score=69.80 Aligned_cols=73 Identities=14% Similarity=0.243 Sum_probs=52.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
..|++++||+|++ .|....++++....... |........+.||+++++.| +++|+|+|+|-.|. |
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---~ 98 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---F 98 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---T
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---C
Confidence 6999999999754 58876666666543211 11111112488999999888 58999999998754 9
Q ss_pred eeeeEEEe
Q 008066 146 VYGALIIH 153 (579)
Q Consensus 146 l~G~liV~ 153 (579)
|.|.|+|+
T Consensus 99 M~G~I~V~ 106 (106)
T 1id2_A 99 MRGKVIVE 106 (106)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 104
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.14 E-value=4.5e-06 Score=75.19 Aligned_cols=93 Identities=9% Similarity=0.064 Sum_probs=60.3
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCCCC-----ceEEe--CCccc---------cCCCC---CCCCCcccccccCCCCeEE
Q 008066 62 MYPGPTLEV-NNGDTLVVKVTNKARYN-----VTIHW--HGVRQ---------MRTAW---ADGPEFVTQCPIRPGMSYT 121 (579)
Q Consensus 62 ~~pgP~i~v-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~---------~~~~~---~DGv~~~~~~~i~PG~~~~ 121 (579)
+|--..|.| ++||+|+|+|+|....+ |++-+ +|... ...++ .|.--......|.||++.+
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 342258999 99999999999997653 33322 22100 00000 0110000112489999999
Q ss_pred EEEEec-CCCcceeeeecccccccceeeeEEEeC
Q 008066 122 YRFTIQ-GQEGTLWWHAHSSWLRATVYGALIIHP 154 (579)
Q Consensus 122 y~f~~~-~~~Gt~~yH~h~~~~~~Gl~G~liV~~ 154 (579)
+.|+++ -++|+|||+|-..+++.||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999862 289999999987777779999999963
No 105
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.14 E-value=2.8e-06 Score=70.44 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=57.7
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCc-ceeEEeCCCcEEEEEEEe
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPL-RNTVGVPVGGWAVIRFVA 533 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~v~irf~a 533 (579)
..+.++.|++|+|+ |.+ ...|.++++.-... .+.+.... ..+.+ .+++.+.+|....+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~~-------~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASEL-------KAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHHH-------HHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccchh-------hcccccccceecCCCCEEEEEe--
Confidence 45789999999986 532 45899998731000 00000000 00122 3667788988888776
Q ss_pred cCceeEEEEecchhhHHccceEEEEEe
Q 008066 534 DNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 534 dnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
+.||.|.|||+ .|.++||.+.+.|+
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999873
No 106
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.12 E-value=7.9e-06 Score=67.21 Aligned_cols=77 Identities=12% Similarity=0.137 Sum_probs=54.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCc----ccccccCCCCeEEEEEEecCCCcceeeeecccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEF----VTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSW 141 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~----~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~ 141 (579)
+.|++++||+|+ +.|....++++....-.. -+|... .....+.||+++++.| +++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIE--FVNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEE--EEECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 699999999955 468876777777664211 122210 0113589999999888 58999999998642
Q ss_pred cccceeeeEEEe
Q 008066 142 LRATVYGALIIH 153 (579)
Q Consensus 142 ~~~Gl~G~liV~ 153 (579)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 24999999984
No 107
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.07 E-value=9.5e-06 Score=69.61 Aligned_cols=75 Identities=12% Similarity=0.191 Sum_probs=49.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
+.|++++||+|++ .|... ++++..+ ....-||... ....||++++|.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 7999999999754 55533 4444432 1111123211 2356899988887 57999999997432 249
Q ss_pred eeeeEEEeCC
Q 008066 146 VYGALIIHPK 155 (579)
Q Consensus 146 l~G~liV~~~ 155 (579)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 108
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.06 E-value=1.5e-05 Score=84.15 Aligned_cols=86 Identities=16% Similarity=0.277 Sum_probs=61.7
Q ss_pred EEEEcCCCCCCeEEEecCCEEEEEEEeCC---CCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcc
Q 008066 56 TITVNGMYPGPTLEVNNGDTLVVKVTNKA---RYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGT 132 (579)
Q Consensus 56 ~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l---~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt 132 (579)
+...+-.+-.+.|+|++||+|++.++|.. +..+++...++ |+ ..-+.||++.++.|++ +++|+
T Consensus 548 Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI----K~DaiPGrtnsvtFta-dkPGv 613 (638)
T 3sbq_A 548 MTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV----SMEISPQQTSSITFVA-DKPGL 613 (638)
T ss_dssp EEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEEEEEC-CSCEE
T ss_pred EEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc----eeeeCCCCeEEEEEEc-CCCEE
Confidence 33444455457999999999999999974 33433333221 11 1258999999999986 89999
Q ss_pred eeeeecccccc--cceeeeEEEeCC
Q 008066 133 LWWHAHSSWLR--ATVYGALIIHPK 155 (579)
Q Consensus 133 ~~yH~h~~~~~--~Gl~G~liV~~~ 155 (579)
|||+|...-.. .+|.|.|+|+|+
T Consensus 614 Y~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 614 HWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEECCCcCCCCcccceEEEEEecC
Confidence 99999852222 389999999874
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.06 E-value=2.1e-05 Score=67.99 Aligned_cols=86 Identities=13% Similarity=0.157 Sum_probs=57.3
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----ceEEe--CCccc---------cC-CCC---CCCCCcc-cccccCCCCeEEEE
Q 008066 66 PTLEV-NNGDTLVVKVTNKARYN-----VTIHW--HGVRQ---------MR-TAW---ADGPEFV-TQCPIRPGMSYTYR 123 (579)
Q Consensus 66 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~---------~~-~~~---~DGv~~~-~~~~i~PG~~~~y~ 123 (579)
..|.| ++||+|+|+|+|....+ +++-+ +|... .. .++ .|. ..+ ....|.||++.++.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDT-RVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCT-TEEEECCCBCTTCEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccc-cceeeeeEECCCCEEEEE
Confidence 58999 99999999999997553 44332 22100 00 000 111 001 11248999999999
Q ss_pred EEecC--CCcc-eeeeecccccccceeeeEEEe
Q 008066 124 FTIQG--QEGT-LWWHAHSSWLRATVYGALIIH 153 (579)
Q Consensus 124 f~~~~--~~Gt-~~yH~h~~~~~~Gl~G~liV~ 153 (579)
|++ . .+|. |||.|...+.++||.|.|+|.
T Consensus 97 f~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 97 FDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EEG-GGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred Eec-cccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 986 4 5655 999998777777999999995
No 110
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.05 E-value=8.3e-06 Score=69.97 Aligned_cols=75 Identities=12% Similarity=0.274 Sum_probs=49.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
+.|++++||+|+ |.|... ++++..+ ...+-||... ..+.||+++++.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETI-----KGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEEC-----TTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 799999999955 555543 4444433 1111123211 2357999988888 57999999997432 249
Q ss_pred eeeeEEEeCC
Q 008066 146 VYGALIIHPK 155 (579)
Q Consensus 146 l~G~liV~~~ 155 (579)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 111
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.02 E-value=2.9e-05 Score=66.94 Aligned_cols=87 Identities=10% Similarity=0.113 Sum_probs=57.6
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----ceEEe--CCccc-------cCCCCC-----CCCCcc-cccccCCCCeEEEEE
Q 008066 66 PTLEV-NNGDTLVVKVTNKARYN-----VTIHW--HGVRQ-------MRTAWA-----DGPEFV-TQCPIRPGMSYTYRF 124 (579)
Q Consensus 66 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~-------~~~~~~-----DGv~~~-~~~~i~PG~~~~y~f 124 (579)
..|.| ++||+|+|+|+|....+ +++-+ .|... .....+ |....+ ....|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 58999 99999999999997653 54433 22110 000000 110001 011489999999999
Q ss_pred EecC--CCcc-eeeeecccccccceeeeEEEe
Q 008066 125 TIQG--QEGT-LWWHAHSSWLRATVYGALIIH 153 (579)
Q Consensus 125 ~~~~--~~Gt-~~yH~h~~~~~~Gl~G~liV~ 153 (579)
+. . .+|+ |+|.|...++++||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 98 DV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 86 4 5776 999998777777999999983
No 112
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.01 E-value=7e-06 Score=67.62 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=57.8
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+| .|.+ ...|.++++...+- .+ .+ ..+ ....++.+.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p-----~~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP-----SG-VD------ASK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC-----TT-CC------HHH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc-----cc-cc------ccc--cccccCccccCCCCEEEEEE--C
Confidence 4678999999988 4532 46899998875320 00 00 000 01123556788988877766 6
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||+ .|..+||.+.+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 8999999999 79999999999873
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.98 E-value=4e-05 Score=66.03 Aligned_cols=87 Identities=9% Similarity=0.161 Sum_probs=58.3
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----ceEEeCC-----------ccccC-CCC---CCCCCcccccccCCCCeEEEEE
Q 008066 66 PTLEV-NNGDTLVVKVTNKARYN-----VTIHWHG-----------VRQMR-TAW---ADGPEFVTQCPIRPGMSYTYRF 124 (579)
Q Consensus 66 P~i~v-~~Gd~v~v~l~N~l~~~-----~siH~HG-----------~~~~~-~~~---~DGv~~~~~~~i~PG~~~~y~f 124 (579)
..|.| ++||+|+|+|+|....+ +++-+-. +..-. ..+ .|.---.....|.||++.++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 58999 99999999999997654 5543321 00000 000 1110000112479999999999
Q ss_pred EecC--CCcc-eeeeecccccccceeeeEEEe
Q 008066 125 TIQG--QEGT-LWWHAHSSWLRATVYGALIIH 153 (579)
Q Consensus 125 ~~~~--~~Gt-~~yH~h~~~~~~Gl~G~liV~ 153 (579)
++ . ++|+ |+|.|...++++||.|.|+|.
T Consensus 97 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 127 (128)
T 2iaa_C 97 DV-SKLKEGEDYAFFCSFPGHWSIMKGTIELG 127 (128)
T ss_dssp ES-SCCCTTCCEEEECCSTTCTTTSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEe
Confidence 86 4 7885 999998877777999999995
No 114
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.96 E-value=2.2e-05 Score=67.23 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=50.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecccccccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRAT 145 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~G 145 (579)
+.|++++||+|+ +.|... .++++... ...-+|.. ...+.||++++|.| +++|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 699999999865 456643 44444432 11112221 12457999999888 589999999987544
Q ss_pred eeeeEEEeCC
Q 008066 146 VYGALIIHPK 155 (579)
Q Consensus 146 l~G~liV~~~ 155 (579)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.95 E-value=4.1e-05 Score=68.45 Aligned_cols=85 Identities=14% Similarity=0.229 Sum_probs=60.9
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCccee-------EEeCCCc--
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNT-------VGVPVGG-- 525 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDT-------v~vp~~g-- 525 (579)
+.+.++.|++|++++.|.+ ....|-+-++.. +. .+.. .|...+. ..|.||.
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------GP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------CS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------Cc-chhc----------cccccccccccccccccCCCCce
Confidence 4689999999999999953 244666665532 10 0100 0000111 2567888
Q ss_pred EEEEEEEecCceeEEEEecchhhHHccceEEEEEe
Q 008066 526 WAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 526 ~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
...++|.+ .||.|.||||+..|...||-+.+.|+
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 88999999 99999999999999999999999873
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.91 E-value=3e-05 Score=64.54 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=51.2
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+ |. +...|.+|+|... .|. +.+ +.-.+++|....+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~---d~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NR---EAMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--EC---SSSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--EC---CCCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--C
Confidence 46899999999985 53 2468999988521 110 001 122367887766665 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||++ |. ||.+.+.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999999873
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.87 E-value=4.4e-05 Score=82.38 Aligned_cols=78 Identities=21% Similarity=0.395 Sum_probs=62.8
Q ss_pred ceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe
Q 008066 454 TKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVA 533 (579)
Q Consensus 454 ~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a 533 (579)
.+.+.++.|++|+|++.|.....+..|.|+++++.+. ..+.||....++|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 4567899999999999995322344788888875421 467888999999999
Q ss_pred cCceeEEEEec---chhhHHccceEEEEEec
Q 008066 534 DNPGVWLMHCH---LDVHITWGLAMAFLVEN 561 (579)
Q Consensus 534 dnpG~wl~HCH---i~~H~~~GM~~~~~V~~ 561 (579)
+.||.|.|||| ...|. ||.+.++|.+
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 99999999999 45675 9999999975
No 118
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=97.55 E-value=0.00083 Score=60.36 Aligned_cols=74 Identities=22% Similarity=0.372 Sum_probs=54.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecc--cccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS--SWLR 143 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~--~~~~ 143 (579)
..|.+..|++|++.++|. +.. |+...+.. |+ +.-+.||+.-++.|+. +++|+|++.|.. +..-
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSC-----EEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 434 33333221 11 1246799999999986 899999999984 3223
Q ss_pred cceeeeEEEeC
Q 008066 144 ATVYGALIIHP 154 (579)
Q Consensus 144 ~Gl~G~liV~~ 154 (579)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 58999999863
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.30 E-value=0.00034 Score=60.10 Aligned_cols=76 Identities=20% Similarity=0.350 Sum_probs=50.9
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|++.|. .|-+..+.. .+ +.. . ..+.+.+|....+.| +
T Consensus 23 ~~i~V~~GDtVtf~n~~~------~H~v~~~~~----------~~-P~g-~-----------~~f~s~pGet~s~TF--~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK------GHNSALMKG----------GA-PEG-A-----------ETWKGKINEEITVTL--S 71 (127)
T ss_dssp SEEEECTTCEEEEECSSS------SCCCEECTT----------CS-CTT-C-----------CCCBCCTTCCCEEEC--C
T ss_pred CEEEECCCCEEEEEECCC------CceEEEccC----------cC-CCC-c-----------cceecCCCCEEEEEe--C
Confidence 457899999999987651 455554321 00 000 0 011224666555555 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEecCc
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
.||.|.|||- .|...||.+.+.|.++.
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999998754
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.29 E-value=0.00063 Score=58.08 Aligned_cols=75 Identities=15% Similarity=0.272 Sum_probs=51.7
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|++.|. .|-+..+.. .+. .. . +.+.+.||....+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~~------~H~v~~~~~----------~~P-~g-~-----------~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK------SHNVEAIKE----------ILP-EG-V-----------ESFKSKINESYTLTV--T 69 (123)
T ss_dssp SEEEECTTEEEEEEESST------TCCCEECTT----------SSC-TT-C-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECCC------CceEEEcCC----------cCC-CC-c-----------cceecCCCCEEEEEe--C
Confidence 457899999999988761 465554421 000 00 0 011234677666666 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEecC
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVENG 562 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~~ 562 (579)
.||.|.|+|- .|..+||.+.+.|.++
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 9999999999 8999999999999863
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.28 E-value=0.00049 Score=58.72 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=52.2
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+..+ ..|-+..+.. .+... .+...+.+|....+.| +
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~ 70 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--E 70 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--C
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--C
Confidence 45789999999998543 3676665421 11100 0122345677666655 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEecCc
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVENGV 563 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~~~ 563 (579)
.||.|.|||- .|..+||.+.+.|.++.
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 9999999995 89999999999998643
No 122
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.24 E-value=0.002 Score=54.60 Aligned_cols=87 Identities=10% Similarity=0.154 Sum_probs=54.7
Q ss_pred CCCCeEEEec-CCEEEEEEEeCCCCC-----ceEEeC-----------Ccccc-CCCC---CCC-CCcccccccCCCCeE
Q 008066 63 YPGPTLEVNN-GDTLVVKVTNKARYN-----VTIHWH-----------GVRQM-RTAW---ADG-PEFVTQCPIRPGMSY 120 (579)
Q Consensus 63 ~pgP~i~v~~-Gd~v~v~l~N~l~~~-----~siH~H-----------G~~~~-~~~~---~DG-v~~~~~~~i~PG~~~ 120 (579)
+--..|.|+. |++|+|+|+|....+ +++-+- |+... ..++ .|. +-. ...-|.||++.
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via-~t~~l~pGes~ 93 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIA-HTKLIGSGEKD 93 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCE-ECCCBCTTCEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCcccee-ccceeCCCcEE
Confidence 3336999976 999999999998543 443221 11110 0011 111 100 11238999999
Q ss_pred EEEEEecC--CCcceeeeecccccccceeeeEEEe
Q 008066 121 TYRFTIQG--QEGTLWWHAHSSWLRATVYGALIIH 153 (579)
Q Consensus 121 ~y~f~~~~--~~Gt~~yH~h~~~~~~Gl~G~liV~ 153 (579)
+..|+.+. ++|+|.|.|. +.+ ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 99998742 8999999999 445 999999883
No 123
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.11 E-value=0.0016 Score=53.07 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=54.0
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+ |.+ ...|-+.+... .+.. ..+. .....+...+.+|....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~----------~~p~-----g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDED----------AVPA-----GVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTT----------SSCT-----TCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCC----------CCcc-----cccc-ccccccccccCCCCEEEEEc--C
Confidence 46789999999996 532 35676655431 0000 0000 00113456788998877776 7
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|+|-+ |..+||-+.+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999873
No 124
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.09 E-value=0.0016 Score=53.99 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=49.7
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+ |.+ ...|.+++....- | . . .-++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~----~---~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------G----E---D--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------S----S---S--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------C----c---c--------cccccccCCCCEEEEEe--C
Confidence 46789999999997 532 4567766543210 0 0 0 01233467887777766 7
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|+|-+ |. ||.+.+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999999873
No 125
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.96 E-value=0.0022 Score=55.44 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=50.4
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+ |. +...|.+++.... .| . .. -++-.+.+|....+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~---d~~~H~v~~~~~~-------~g----~----------~~-~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NG---EVMPHNVAFKKGI-------VG----E----------DA-FRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--EC---SSSCBCCEECTTT-------SS----S----------SC-EECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--EC---CCCceEEEEeCCC-------CC----c----------cc-ccccccCCCCEEEEEc--C
Confidence 46789999999996 53 2457877764321 00 0 00 1233567888777776 7
Q ss_pred CceeEEEEecchhhHHccceEEEEEe
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.||.|.|||-+ |. ||.+.+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 89999999987 76 999999873
No 126
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.66 E-value=0.0087 Score=51.85 Aligned_cols=74 Identities=22% Similarity=0.372 Sum_probs=53.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecc--cccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS--SWLR 143 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~--~~~~ 143 (579)
..|.+..|++|++.++|.. .. |++..... |. ..-+.||+.-++.|+. +++|+|.|+|.. +..-
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 44433321 21 1247899988899986 899999999953 1112
Q ss_pred cceeeeEEEeC
Q 008066 144 ATVYGALIIHP 154 (579)
Q Consensus 144 ~Gl~G~liV~~ 154 (579)
++|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 48999998863
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.51 E-value=0.0064 Score=51.79 Aligned_cols=75 Identities=20% Similarity=0.355 Sum_probs=48.6
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+..+ . .|-+.++- +.. +.. ... +...+|....+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~-----~-~H~v~~~~----------~~~-p~~-~~~-----------~~~~pG~t~~~tF--~ 69 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVD-----K-GHNVESIK----------DMI-PEG-AEK-----------FKSKINENYVLTV--T 69 (123)
T ss_dssp SEEEECTTCEEEEEESS-----S-SCCCEECT----------TCS-CTT-CCC-----------CBCCTTCCEEEEC--C
T ss_pred CEEEECCCCEEEEEECC-----C-CeEEEEec----------ccC-CCC-ccc-----------eecCCCCEEEEEe--C
Confidence 45789999999997654 1 45555431 000 000 000 1124666544444 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEecC
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVENG 562 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~~ 562 (579)
.||.|.|+|- .|...||.+.+.|.++
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 70 QPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 8999999997 5999999999999763
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.46 E-value=0.0052 Score=52.34 Aligned_cols=75 Identities=25% Similarity=0.446 Sum_probs=48.6
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+..+ ..|-+.++- +... .. . ..+.+.+|....+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~~------~~H~v~~~~----------~~~p-~~-~-----------~~~~~~pG~t~~~tF--~ 69 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTD------KGHNVETIK----------GMAP-DG-A-----------DYVKTTVGQEAVVKF--D 69 (123)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECT----------TSSC-TT-C-----------CCCBCCTTSCEEEEC--C
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEec----------ccCC-CC-c-----------cceecCCCCEEEEEe--C
Confidence 45789999999986543 145554431 0000 00 0 011234666655554 7
Q ss_pred CceeEEEEecchhhHHccceEEEEEecC
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVENG 562 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~~ 562 (579)
.||.|.|+|- .|...||.+.+.|.+.
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 70 KEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp SCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred CCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 8999999998 5999999999999763
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.10 E-value=0.022 Score=60.43 Aligned_cols=79 Identities=18% Similarity=0.316 Sum_probs=60.5
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|+.|+|++.|.....+..|.|.+.+... -+.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 45789999999999999532235678777765432 23577888889999999
Q ss_pred CceeEEEEecchhhHH-ccceEEEEEec
Q 008066 535 NPGVWLMHCHLDVHIT-WGLAMAFLVEN 561 (579)
Q Consensus 535 npG~wl~HCHi~~H~~-~GM~~~~~V~~ 561 (579)
.||.|.++|...-|.. .+|...++|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 9999999999755543 57999998864
No 130
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.60 E-value=0.025 Score=48.01 Aligned_cols=73 Identities=16% Similarity=0.227 Sum_probs=47.5
Q ss_pred eeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec
Q 008066 455 KLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVAD 534 (579)
Q Consensus 455 ~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad 534 (579)
..+.++.|++|+|+..+ . .|-+++... .+... .. .+.+.+|....+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d-----~-~H~v~~~~~----------~~p~~--~~-----------~~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD-----K-GHNVETIKG----------MIPDG--AE-----------AFKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS-----S-SCCCEECTT----------CSCTT--CC-----------CCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC-----C-CcEEEEccc----------ccCCC--cc-----------eeecCCCCEEEEEe--C
Confidence 45789999999997432 2 566666531 11100 00 11234666655555 8
Q ss_pred CceeEEEEecchhhHHccceEEEEEecC
Q 008066 535 NPGVWLMHCHLDVHITWGLAMAFLVENG 562 (579)
Q Consensus 535 npG~wl~HCHi~~H~~~GM~~~~~V~~~ 562 (579)
.||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999987 766 9999999864
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.58 E-value=0.051 Score=46.95 Aligned_cols=71 Identities=17% Similarity=0.271 Sum_probs=51.8
Q ss_pred eEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecC
Q 008066 456 LYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADN 535 (579)
Q Consensus 456 ~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn 535 (579)
.+.++.|+.|+|++.|. +..|. |.+-+. .--+.+.||....+.|.++.
T Consensus 61 ~l~Vp~G~~V~~~vts~----DV~Hs-------f~ip~~---------------------~~k~d~~PG~~~~~~~~~~~ 108 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSP----DVIHG-------FHVEGT---------------------NINVEVLPGEVSTVRYTFKR 108 (135)
T ss_dssp SEEEETTSEEEEEEEBS----SSCEE-------EEETTS---------------------SCEEEECBTBCEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEeC----Cccce-------EEecCC---------------------CceeEeCCCCcEEEEEEcCC
Confidence 37899999999999883 23443 433111 01245667777789999999
Q ss_pred ceeEEEEecc---hhhHHccceEEEEEe
Q 008066 536 PGVWLMHCHL---DVHITWGLAMAFLVE 560 (579)
Q Consensus 536 pG~wl~HCHi---~~H~~~GM~~~~~V~ 560 (579)
||.|.++|.. ..| .+|-..++|.
T Consensus 109 ~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 109 PGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp CEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred CEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 9999999987 677 5898888875
No 132
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.48 E-value=0.031 Score=50.09 Aligned_cols=91 Identities=12% Similarity=0.075 Sum_probs=60.9
Q ss_pred eeEEe-ecCcEEEEEEecCCCCC--CCCCCeeeeccceEEEEecC-----------C--CCCCCCCCCCCCCCCCCccee
Q 008066 455 KLYKL-EYGSRVQIVLQDTSIFT--PENHPIHIHGYDFYIIAEGF-----------G--NFNPKTDTSKFNLVDPPLRNT 518 (579)
Q Consensus 455 ~~~~~-~~G~~ve~~l~n~~~~~--~~~HP~HlHG~~F~vv~~g~-----------g--~~~~~~~~~~~~~~~p~~rDT 518 (579)
..+.+ +.|++|.|+|.|.+... ++.|-|- +...+. + .+-+.. +......+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~v-------i~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t 123 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLV-------IAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHT 123 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCE-------EEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEE-------eccCcchhhhHHHhhhcccccccccc-------ccchhccc
Confidence 35788 89999999999965210 1135443 333210 0 000000 01123456
Q ss_pred EEeCCCcEEEEEEEec--CceeEEEEecchhhHHccceEEEEEe
Q 008066 519 VGVPVGGWAVIRFVAD--NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 519 v~vp~~g~v~irf~ad--npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
..|.+|....+.|.++ .||.|-|+|-+--|.. ||-+.+.|.
T Consensus 124 ~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 124 KLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 6789999999999987 8999999999999998 999999885
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.90 E-value=0.098 Score=44.73 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=61.7
Q ss_pred eeEEeecC-cEEEEEEecCCCCC--CCCCCeeeeccceEEEEecC-----------C---CCCCCCCCCCCCCCCCCcce
Q 008066 455 KLYKLEYG-SRVQIVLQDTSIFT--PENHPIHIHGYDFYIIAEGF-----------G---NFNPKTDTSKFNLVDPPLRN 517 (579)
Q Consensus 455 ~~~~~~~G-~~ve~~l~n~~~~~--~~~HP~HlHG~~F~vv~~g~-----------g---~~~~~~~~~~~~~~~p~~rD 517 (579)
..+.++.| +.|.+++.|.+... .+.|-|- +...+. | .+-+.. ..-....
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~~~~~~~~~m~~~~~~~~v~~~-------~~~~~~~ 83 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSADVGDVAKEGAHAGADNNFVTPG-------DKRVIAF 83 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGGHHHHHHHHHTTCGGGTTSCTT-------CTTCSEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcchhhhHHHhhhccccccccccc-------cccceee
Confidence 45789999 99999999965211 1235543 333221 0 000000 0112335
Q ss_pred eEEeCCCcEEEEEEEec---CceeEEEEecchhhHHccceEEEEEe
Q 008066 518 TVGVPVGGWAVIRFVAD---NPGVWLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 518 Tv~vp~~g~v~irf~ad---npG~wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
+..|.||....+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 84 t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 84 TPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 66789999999999987 8999999999999988 899999885
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.11 E-value=0.15 Score=43.41 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=38.4
Q ss_pred ceeEEeCCCcEEEEEEEec--Ccee-EEEEecchhhHHccceEEEEEe
Q 008066 516 RNTVGVPVGGWAVIRFVAD--NPGV-WLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 516 rDTv~vp~~g~v~irf~ad--npG~-wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
..|..|.||....+.|.+. .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3456789999999999987 8995 999999999998 999999885
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.02 E-value=0.2 Score=42.75 Aligned_cols=43 Identities=14% Similarity=0.188 Sum_probs=37.6
Q ss_pred eeEEeCCCcEEEEEEEec--Ccee-EEEEecchhhHHccceEEEEEe
Q 008066 517 NTVGVPVGGWAVIRFVAD--NPGV-WLMHCHLDVHITWGLAMAFLVE 560 (579)
Q Consensus 517 DTv~vp~~g~v~irf~ad--npG~-wl~HCHi~~H~~~GM~~~~~V~ 560 (579)
.+..|.||....+.|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 455689999999999997 7866 999999999998 899999885
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.23 E-value=0.28 Score=41.79 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=59.3
Q ss_pred eeEEe-ecCcEEEEEEecCCCCC--CCCCCeeeeccceEEEEecCCC-C--CCCCCCCCCCCC---C-CCcceeEEeCCC
Q 008066 455 KLYKL-EYGSRVQIVLQDTSIFT--PENHPIHIHGYDFYIIAEGFGN-F--NPKTDTSKFNLV---D-PPLRNTVGVPVG 524 (579)
Q Consensus 455 ~~~~~-~~G~~ve~~l~n~~~~~--~~~HP~HlHG~~F~vv~~g~g~-~--~~~~~~~~~~~~---~-p~~rDTv~vp~~ 524 (579)
.-+.+ +.|++|.+++.|.+... .+.|-|-+ ...+... . +.-.....-++. + .....|-.|.||
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pG 90 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAG 90 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTT
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCC
Confidence 35788 89999999999965210 11355443 2221000 0 000000000010 1 112345568999
Q ss_pred cEEEEEEEec--Ccee-EEEEecchhhHHccceEEEEE
Q 008066 525 GWAVIRFVAD--NPGV-WLMHCHLDVHITWGLAMAFLV 559 (579)
Q Consensus 525 g~v~irf~ad--npG~-wl~HCHi~~H~~~GM~~~~~V 559 (579)
....+.|.+. .||. |-|.|-+--|.. ||-+.+.|
T Consensus 91 et~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 91 EKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp CEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9999999987 7876 999999999998 89999887
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=91.93 E-value=0.64 Score=41.48 Aligned_cols=74 Identities=16% Similarity=0.279 Sum_probs=54.2
Q ss_pred eEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecC
Q 008066 456 LYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADN 535 (579)
Q Consensus 456 ~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn 535 (579)
.+.++.|+.|++.+.|. +..|.|-+=.... -+.+-||....+.|.++.
T Consensus 94 ~l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~k 141 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKR 141 (168)
T ss_dssp SEEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCS
T ss_pred EEEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCC
Confidence 36899999999999984 4566665432211 234557777789999999
Q ss_pred ceeEEEEecc-hhhHHccceEEEEEec
Q 008066 536 PGVWLMHCHL-DVHITWGLAMAFLVEN 561 (579)
Q Consensus 536 pG~wl~HCHi-~~H~~~GM~~~~~V~~ 561 (579)
||.|.+.|.. --+.-.+|...+.|++
T Consensus 142 pG~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 142 PGEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred CEEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 9999999985 3344578988888753
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.55 E-value=0.63 Score=39.22 Aligned_cols=96 Identities=8% Similarity=0.165 Sum_probs=58.3
Q ss_pred eeEEeec-CcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCC-CCC-C--CCC-CCCC-C-CCCCCcceeEEeCCCcE
Q 008066 455 KLYKLEY-GSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFG-NFN-P--KTD-TSKF-N-LVDPPLRNTVGVPVGGW 526 (579)
Q Consensus 455 ~~~~~~~-G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g-~~~-~--~~~-~~~~-~-~~~p~~rDTv~vp~~g~ 526 (579)
.-+.++. |++|+++|.|.+.+ |--.=||.|-+...+.- ... . ... ...| . -+......|..|.||..
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred CEEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcE
Confidence 4567875 99999999996622 11111344544432110 000 0 000 0011 0 02234557778999999
Q ss_pred EEEEEEec---CceeEEEEecchhhHHccceEEEEE
Q 008066 527 AVIRFVAD---NPGVWLMHCHLDVHITWGLAMAFLV 559 (579)
Q Consensus 527 v~irf~ad---npG~wl~HCHi~~H~~~GM~~~~~V 559 (579)
..+.|.+. .+|.|-|-|- -|. ||-+.+.|
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99999987 8999999999 887 99999987
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=86.12 E-value=8.9 Score=31.89 Aligned_cols=69 Identities=14% Similarity=0.162 Sum_probs=48.7
Q ss_pred EEEEEeecCCCccEEEEEc-CCeeEEEe--eCCcccC--------ceEEeEEEECcccEEEEEEEcCC--CCcceEEEEE
Q 008066 229 NLLRVINSGLNQPLFFTIA-NHQFTVVG--ADASYLK--------PFTTSVIMLGPGQTTDVLIKGDQ--PPSRYYLAAR 295 (579)
Q Consensus 229 ~rlRliN~g~~~~~~~~l~-gh~~~via--~DG~~~~--------p~~~d~l~l~pG~R~dv~v~~~~--~~g~~~l~~~ 295 (579)
+.|.+.|.+ ...+.+.+. |+.++++- .+|..+- .+......|.||+...+-...++ .||.|.+++.
T Consensus 22 ~~ltv~N~s-~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 22 FNMSLKNQS-ERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEEEECS-SSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEEEcCC-CCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 467778888 444577775 56544444 4466541 23457899999999999999985 5799999887
Q ss_pred ecc
Q 008066 296 AYA 298 (579)
Q Consensus 296 ~~~ 298 (579)
...
T Consensus 101 l~~ 103 (120)
T 3isy_A 101 FKG 103 (120)
T ss_dssp ECC
T ss_pred EEe
Confidence 543
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=76.53 E-value=31 Score=28.55 Aligned_cols=74 Identities=11% Similarity=0.128 Sum_probs=46.7
Q ss_pred eEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCC---cccccccCCCCeEEEEEEecC--C
Q 008066 55 NTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPE---FVTQCPIRPGMSYTYRFTIQG--Q 129 (579)
Q Consensus 55 ~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~---~~~~~~i~PG~~~~y~f~~~~--~ 129 (579)
.+...|-+--.=+|+...|.+..+.|.+.... ..| .|+||-. .+....|+||++.+|..+.++ .
T Consensus 23 ~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~ 91 (120)
T 3isy_A 23 NMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPE 91 (120)
T ss_dssp EEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCC
T ss_pred EEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCC
Confidence 33344433323477778888888777775321 222 3466632 234566999999999999953 5
Q ss_pred Ccceeeeecc
Q 008066 130 EGTLWWHAHS 139 (579)
Q Consensus 130 ~Gt~~yH~h~ 139 (579)
+|+|..+.-.
T Consensus 92 pG~Ytl~a~l 101 (120)
T 3isy_A 92 PGTYEVKVTF 101 (120)
T ss_dssp SEEEEEEEEE
T ss_pred CccEEEEEEE
Confidence 8999877543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=72.04 E-value=12 Score=34.14 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=44.9
Q ss_pred eEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 220 VVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 220 ~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
.+.++.|+.+||+|-+.. -.+.|.|......+ ..-||..-.+.+.++ .||.|...|..+..
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG~y~g~CsE~CG 102 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGICAEICG 102 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSEEEEEEECSCCS
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeC-CCeEEEEEcccccc
Confidence 589999999999998764 45566666443333 234777778888888 79999999986543
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=65.92 E-value=17 Score=33.18 Aligned_cols=76 Identities=16% Similarity=0.072 Sum_probs=53.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecc--cccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS--SWLR 143 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~--~~~~ 143 (579)
..|.+..|+.|++.|++.. .- ||..++.- | .+.-+.||..-+..|.+ +++|+|+..|.. +..-
T Consensus 41 n~l~lP~g~~V~~~lTS~D-Vi-----HSF~IP~l----g----vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-VM-----HSFFIPRL----G----SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-SC-----EEEEEGGG----T----EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecCC-ce-----eeEEeccc----C----cEEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 4799999999999999873 22 44443321 1 12346789999999975 899999999974 2222
Q ss_pred cceeeeEEEe-CCC
Q 008066 144 ATVYGALIIH-PKE 156 (579)
Q Consensus 144 ~Gl~G~liV~-~~~ 156 (579)
+.|.+.++|. +.+
T Consensus 106 s~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 106 SGMKFKAIATPDRA 119 (205)
T ss_dssp TTCCEEEEEESSHH
T ss_pred hhceEEEEEECCHH
Confidence 3788888887 443
No 143
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=57.56 E-value=35 Score=33.76 Aligned_cols=16 Identities=31% Similarity=0.530 Sum_probs=14.2
Q ss_pred ccccCCCCeEEEEEEe
Q 008066 111 QCPIRPGMSYTYRFTI 126 (579)
Q Consensus 111 ~~~i~PG~~~~y~f~~ 126 (579)
..||+|||+.+...++
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 4579999999999987
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=51.69 E-value=32 Score=32.81 Aligned_cols=61 Identities=8% Similarity=0.169 Sum_probs=44.4
Q ss_pred eEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 220 VVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 220 ~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
.+.++.|+.+|+++-+.. -.|.|.+.+....+ ..-||..-.+.+.++ .||.|...|..+..
T Consensus 172 ~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k~----------------da~PG~~n~~~~~~~-~~G~y~g~Cse~CG 232 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAE-REGIFFGQCSELCG 232 (262)
T ss_dssp CEEEETTSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECBTCCEEEEEECC-SCEEEEECCCSCCS
T ss_pred eEEEecCCEEEEEEEECc--ccceeeecccCceE----------------EecCCceeEEEEecC-CcEEEEEEChHhcc
Confidence 489999999999998653 45566666443332 233777778888888 79999999986543
No 145
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=51.56 E-value=33 Score=33.28 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=45.4
Q ss_pred eeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEecc
Q 008066 219 VVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYA 298 (579)
Q Consensus 219 ~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~ 298 (579)
..+.++.|+.+|+++-+.. -.|.|.|......+ ..-||..-.+.+.++ .||.|...|..+.
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k~----------------daiPG~~n~~~~~~~-~~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVKQ----------------DAVPGRIAQLWFSVD-QEGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEEECS-SSEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCceE----------------EecCCceEEEEEEeC-CCEEEEEEccccc
Confidence 4689999999999998744 45566665443332 234788888888888 7999999998654
Q ss_pred C
Q 008066 299 S 299 (579)
Q Consensus 299 ~ 299 (579)
.
T Consensus 250 G 250 (298)
T 3hb3_B 250 G 250 (298)
T ss_dssp S
T ss_pred C
Confidence 3
No 146
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=49.68 E-value=47 Score=31.58 Aligned_cols=76 Identities=21% Similarity=0.195 Sum_probs=51.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecc--cccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS--SWLR 143 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~--~~~~ 143 (579)
..|.+..|+.|++.++... .- ||..++.- | + +.-+-||..-+..|++ +++|+|...|.. +..-
T Consensus 171 n~l~lP~g~~v~~~~tS~D-Vi-----Hsf~ip~l----~---~-k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VI-----HSWTVPAF----G---V-KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SC-----EEEEEGGG----T---E-EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc-cc-----ceeeeccc----C---c-eEEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 4699999999999999873 22 34333321 1 1 1235679888888975 899999999974 2222
Q ss_pred cceeeeEEEeCCC
Q 008066 144 ATVYGALIIHPKE 156 (579)
Q Consensus 144 ~Gl~G~liV~~~~ 156 (579)
+.|.+.+.|.+++
T Consensus 236 ~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 236 AYMPITVKVVSEE 248 (262)
T ss_dssp GGCCEEEEEECHH
T ss_pred ccCeEEEEEEcHH
Confidence 3677777776543
No 147
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=46.03 E-value=58 Score=31.56 Aligned_cols=76 Identities=20% Similarity=0.183 Sum_probs=52.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCcccccccCCCCeEEEEEEecCCCcceeeeecc--cccc
Q 008066 66 PTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHS--SWLR 143 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~~~~~Gt~~yH~h~--~~~~ 143 (579)
..|.+..|+.|++.+++.. .| |+..++.- |+ +.-+-||..-+..|++ +++|+|...|.. +..-
T Consensus 189 N~lvlP~g~~V~~~ltS~D----Vi--Hsf~iP~l----g~----k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VI--HAWTIPAF----AV----KQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SC--EEEEEGGG----TE----EEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC----cc--ceeeEccc----Cc----eEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999963 22 33333221 11 1235689888888976 899999999984 2222
Q ss_pred cceeeeEEEeCCC
Q 008066 144 ATVYGALIIHPKE 156 (579)
Q Consensus 144 ~Gl~G~liV~~~~ 156 (579)
+.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 3777777776554
No 148
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=44.23 E-value=21 Score=29.92 Aligned_cols=47 Identities=19% Similarity=0.292 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCc---eEEeCCccccCCC---CCCCCCcccccccCCCCeEEEEE
Q 008066 77 VVKVTNKARYNV---TIHWHGVRQMRTA---WADGPEFVTQCPIRPGMSYTYRF 124 (579)
Q Consensus 77 ~v~l~N~l~~~~---siH~HG~~~~~~~---~~DGv~~~~~~~i~PG~~~~y~f 124 (579)
+|++.|....+. +=||.=....+.- ..+||-| .|.-|.||++|+|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeC
Confidence 466677665543 3366422211110 1245533 356699999888764
No 149
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=44.07 E-value=38 Score=33.88 Aligned_cols=111 Identities=21% Similarity=0.172 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHhhhcccccCce-EEEEEEEEEEe------------eecCceeeeEEEEcCCCCCCeEEEecCCEE
Q 008066 10 NSFGFFLGLVLLIASNALLSFANAKA-HHHDFVIQATP------------VKRLCKTHNTITVNGMYPGPTLEVNNGDTL 76 (579)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~------------~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v 76 (579)
++++++++..+++...+....+..+. +..-|.+.... ....-+..++...+=++||-+++++
T Consensus 229 rkv~~~~~~~tlv~v~~gy~~t~~~yP~tiPlQag~~~~i~Pl~~~~~~~~~~~~V~~~v~~A~Y~vpgR~l~~~----- 303 (419)
T 3rfr_A 229 RRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKEQVTTELNGGVYKVPGRELTIN----- 303 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCSCCCCCCSCCSCCCCCCSSCSTTCSSCCCEEEEEEEEEESSSSEEEEE-----
T ss_pred ceeehhHHHHHHHHHHHHHHhhhhcCCCccccccccccCCccCccccccCCCCCceEEEEeceEEecCCcEEEEE-----
Q ss_pred EEEEEeCCCCCceE---EeCCccccCCCC-------------CCCCCcccccccCCCCeEEEEEEecC
Q 008066 77 VVKVTNKARYNVTI---HWHGVRQMRTAW-------------ADGPEFVTQCPIRPGMSYTYRFTIQG 128 (579)
Q Consensus 77 ~v~l~N~l~~~~si---H~HG~~~~~~~~-------------~DGv~~~~~~~i~PG~~~~y~f~~~~ 128 (579)
++++|+.+.+..| -.-|++...... .+|.. -.. ||+|||+.+.+.++.+
T Consensus 304 -~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 304 -VKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp -EEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEEC
T ss_pred -EEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeeh
No 150
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=42.76 E-value=40 Score=28.17 Aligned_cols=69 Identities=22% Similarity=0.327 Sum_probs=40.2
Q ss_pred EEEcCCCCCCeEEEecCCEEEEEEE---eCCCCCceEEe----CCccccC-CCCCCCCCcccccccCCCCeEEEEEEe
Q 008066 57 ITVNGMYPGPTLEVNNGDTLVVKVT---NKARYNVTIHW----HGVRQMR-TAWADGPEFVTQCPIRPGMSYTYRFTI 126 (579)
Q Consensus 57 ~~~ng~~pgP~i~v~~Gd~v~v~l~---N~l~~~~siH~----HG~~~~~-~~~~DGv~~~~~~~i~PG~~~~y~f~~ 126 (579)
..++|- +.+.=.++.|..+.+.+. |.......... .|+..+- ....|+-.....|||.+|+.++|.+++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 344443 245667888998888877 22222222222 3444421 112455433358999999999999877
No 151
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=42.17 E-value=40 Score=27.01 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=34.1
Q ss_pred CEEEEEEEeCCCCC---ceEEeCC--ccccCCCCCCCCCcccccccCCCCeEEEEEEe-cCCCcce
Q 008066 74 DTLVVKVTNKARYN---VTIHWHG--VRQMRTAWADGPEFVTQCPIRPGMSYTYRFTI-QGQEGTL 133 (579)
Q Consensus 74 d~v~v~l~N~l~~~---~siH~HG--~~~~~~~~~DGv~~~~~~~i~PG~~~~y~f~~-~~~~Gt~ 133 (579)
-.+.|.|+|-|+.+ ..++..| +... . -+....|+||++..+++.. +..+|..
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~-------~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-K-------ILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTTEEE-E-------EEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCCCcc-e-------EEEcCcCCCCCEEEEEEEEecCcccce
Confidence 35789999999864 3344444 3322 1 1222359999999999988 6667764
No 152
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=41.63 E-value=21 Score=29.95 Aligned_cols=47 Identities=21% Similarity=0.237 Sum_probs=24.5
Q ss_pred EEEEEeCCCCCc---eEEeCCccccCC---CCCCCCCcccccccCCCCeEEEEE
Q 008066 77 VVKVTNKARYNV---TIHWHGVRQMRT---AWADGPEFVTQCPIRPGMSYTYRF 124 (579)
Q Consensus 77 ~v~l~N~l~~~~---siH~HG~~~~~~---~~~DGv~~~~~~~i~PG~~~~y~f 124 (579)
+|++.|....+. +=||.=....+. -..+||-| .|.-|.||++|+|.=
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEeC
Confidence 466667665543 336642221111 00245433 356699999887765
No 153
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=41.44 E-value=52 Score=27.18 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=37.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCCceE--EeCCccccCCCCCC-----C----CCcccccccCCCCeEEEEE
Q 008066 67 TLEVNNG-DTLVVKVTNKARYNVTI--HWHGVRQMRTAWAD-----G----PEFVTQCPIRPGMSYTYRF 124 (579)
Q Consensus 67 ~i~v~~G-d~v~v~l~N~l~~~~si--H~HG~~~~~~~~~D-----G----v~~~~~~~i~PG~~~~y~f 124 (579)
.|.+++| ++++|+|.|..+.|.-+ |+|=....+.-..| | .|.-|..-..||++.+...
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~L 87 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVEL 87 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEE
Confidence 5777887 68999999999988665 66655444321122 2 3333444577888877777
No 154
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=41.44 E-value=52 Score=27.18 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=37.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCCceE--EeCCccccCCCCCC-----C----CCcccccccCCCCeEEEEE
Q 008066 67 TLEVNNG-DTLVVKVTNKARYNVTI--HWHGVRQMRTAWAD-----G----PEFVTQCPIRPGMSYTYRF 124 (579)
Q Consensus 67 ~i~v~~G-d~v~v~l~N~l~~~~si--H~HG~~~~~~~~~D-----G----v~~~~~~~i~PG~~~~y~f 124 (579)
.|.+++| ++++|+|.|..+.|.-+ |+|=....+.-..| | .|.-|..-..||++.+...
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~L 87 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVEL 87 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEE
Confidence 5777887 68999999999988665 66655444321122 2 3333444577888877777
No 155
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=39.12 E-value=52 Score=27.44 Aligned_cols=69 Identities=17% Similarity=0.337 Sum_probs=40.4
Q ss_pred EEEcCCCCCCeEEEecCCEEEEEEEeCCC---CC--ceEE--eCCccccC-CCCCCCCCcccccccCCCCeEEEEEEe
Q 008066 57 ITVNGMYPGPTLEVNNGDTLVVKVTNKAR---YN--VTIH--WHGVRQMR-TAWADGPEFVTQCPIRPGMSYTYRFTI 126 (579)
Q Consensus 57 ~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~---~~--~siH--~HG~~~~~-~~~~DGv~~~~~~~i~PG~~~~y~f~~ 126 (579)
..++|--+.+.=.++.|..+.+.+.=..+ .. +.++ ..|+..+- ....|+-.+ ..|||.+|+.++|.+++
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 34554312455678889988888772222 22 2222 23544432 112455433 68999999999999876
No 156
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=36.92 E-value=29 Score=29.57 Aligned_cols=48 Identities=21% Similarity=0.259 Sum_probs=24.9
Q ss_pred EEEEEeCCCCCc---eEEeCCccccCCC---CCCCCCcccccccCCCCeEEEEEE
Q 008066 77 VVKVTNKARYNV---TIHWHGVRQMRTA---WADGPEFVTQCPIRPGMSYTYRFT 125 (579)
Q Consensus 77 ~v~l~N~l~~~~---siH~HG~~~~~~~---~~DGv~~~~~~~i~PG~~~~y~f~ 125 (579)
+|++.|....+. +=||.=....+.- ..+||-| .|.-|.||++|+|.=-
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~YtSg 91 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYTSG 91 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEcCC
Confidence 356667665543 3366422211110 0245533 3566999998877653
No 157
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.43 E-value=75 Score=29.46 Aligned_cols=62 Identities=13% Similarity=0.128 Sum_probs=43.4
Q ss_pred eeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEecc
Q 008066 219 VVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYA 298 (579)
Q Consensus 219 ~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~ 298 (579)
..+.++.|+.+|+.+-.+. -.|+|.+....+.+ | .-||..-.+.+.++ +||.|...|..+.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K~-------------D---aiPGr~n~~~~~~~-~~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLKT-------------D---AIPGRLNQTTLMSS-RPGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE-------------E---ECTTCCEEEEECCS-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcEE-------------E---ecCCceEEEEEecC-CcEEEEEEehhhc
Confidence 3589999999999987644 44566665443222 2 23677777778788 7999999998654
Q ss_pred C
Q 008066 299 S 299 (579)
Q Consensus 299 ~ 299 (579)
.
T Consensus 201 G 201 (227)
T 1v54_B 201 G 201 (227)
T ss_dssp S
T ss_pred c
Confidence 3
No 158
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=35.35 E-value=75 Score=25.86 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=29.8
Q ss_pred EEEEEEeecCCCcc-EEEEEcCC-eeEEEeeCCcccCceEEeEEEECcccEEEEEEEc
Q 008066 228 TNLLRVINSGLNQP-LFFTIANH-QFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKG 283 (579)
Q Consensus 228 ~~rlRliN~g~~~~-~~~~l~gh-~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~ 283 (579)
.|+|+|+|.+.... +.+.+.|. .+.++. + ..+.|.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 68999999995543 35566553 233321 2 14999999977766654
No 159
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=33.97 E-value=27 Score=29.59 Aligned_cols=44 Identities=20% Similarity=0.380 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCceE---EeC-----CccccCCCCCCCCCcccccccCCCCeEEEE
Q 008066 77 VVKVTNKARYNVTI---HWH-----GVRQMRTAWADGPEFVTQCPIRPGMSYTYR 123 (579)
Q Consensus 77 ~v~l~N~l~~~~si---H~H-----G~~~~~~~~~DGv~~~~~~~i~PG~~~~y~ 123 (579)
+|++.|....+.-| ||. |-..... .+||-| .|.-|.||++|+|.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVG-eqP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQ--GAGVVG-ETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEE--EESBTT-BCCEECTTEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--cCceEc-CCCcCCCCCceEEc
No 160
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=33.88 E-value=51 Score=32.26 Aligned_cols=61 Identities=13% Similarity=0.182 Sum_probs=43.7
Q ss_pred eEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCCCCcceEEEEEeccC
Q 008066 220 VVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAS 299 (579)
Q Consensus 220 ~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~~~g~~~l~~~~~~~ 299 (579)
.+.++.|+.+||++-.. .-.|.|.+.+....+ ..-||..-.+.+.++ .||.|...|..+..
T Consensus 152 ~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~-~~G~y~g~CsE~CG 212 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGISASYSG 212 (315)
T ss_dssp BCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEE----------------EECBTSCEEEEEECC-SCBCCEEBCCSCCS
T ss_pred eEEEeCCCEEEEEEEeC--CccceeeecccCcEE----------------eecCCcceeeEEecC-CCeEEEEeccccch
Confidence 47899999999998754 345566665443332 233788888888888 79999999986543
No 161
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=29.23 E-value=1.8e+02 Score=22.53 Aligned_cols=69 Identities=10% Similarity=0.020 Sum_probs=38.3
Q ss_pred EEecCCEEEEEEeecCCCccEEEEEcCC--eeEEEeeCCcccCceEEeEEEECcccEEEEEEEcCC--CCcceEEEEEe
Q 008066 222 PIDSGETNLLRVINSGLNQPLFFTIANH--QFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQ--PPSRYYLAARA 296 (579)
Q Consensus 222 ~v~~G~~~rlRliN~g~~~~~~~~l~gh--~~~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~~~--~~g~~~l~~~~ 296 (579)
--++||++++|++-.... ..+. .+- .+++..-+|+.+. .-.........++..+..+. ..|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~-~~p~--~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDEN-FHPL--NELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGG-GCBC--CCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCC-CcCC--CCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 368899999998755422 1111 111 3455555665331 11122233445666666654 35999998873
No 162
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.89 E-value=96 Score=28.82 Aligned_cols=50 Identities=26% Similarity=0.348 Sum_probs=34.2
Q ss_pred CeEEEecCCEEEEEEEeCCCC------CceEEeCCccccCCCCCCCCCcccccccCCCCeEEE
Q 008066 66 PTLEVNNGDTLVVKVTNKARY------NVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTY 122 (579)
Q Consensus 66 P~i~v~~Gd~v~v~l~N~l~~------~~siH~HG~~~~~~~~~DGv~~~~~~~i~PG~~~~y 122 (579)
.+|+.+-|-++.|.|.|..+. +..+...|...... .-++.-+.|||++|.
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-------aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-------AGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-------TTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-------CCCEEEECCCCeEec
Confidence 578888888899999998643 55566666554332 123556899998763
No 163
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=22.33 E-value=3.1e+02 Score=22.13 Aligned_cols=25 Identities=8% Similarity=0.130 Sum_probs=19.8
Q ss_pred CCeEEEecCCEEEEEEEeCCCCCce
Q 008066 65 GPTLEVNNGDTLVVKVTNKARYNVT 89 (579)
Q Consensus 65 gP~i~v~~Gd~v~v~l~N~l~~~~s 89 (579)
|-+|+++.||++.|.|.-+-.....
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~ 38 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYM 38 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcE
Confidence 4589999999999999977654443
No 164
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=21.41 E-value=2e+02 Score=22.66 Aligned_cols=58 Identities=22% Similarity=0.265 Sum_probs=37.6
Q ss_pred eEEEecC-CEEEEEEEeCCCCCceE--EeCCccccCCCCCC-----C----CCcccccccCCCCeEEEEE
Q 008066 67 TLEVNNG-DTLVVKVTNKARYNVTI--HWHGVRQMRTAWAD-----G----PEFVTQCPIRPGMSYTYRF 124 (579)
Q Consensus 67 ~i~v~~G-d~v~v~l~N~l~~~~si--H~HG~~~~~~~~~D-----G----v~~~~~~~i~PG~~~~y~f 124 (579)
.|.+++| ++++|+|.|..+.|.-+ |+|=......-..| | .|.-|..-..||++.+.+.
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~L 81 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVEL 81 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEE
T ss_pred cEEEcCCCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEE
Confidence 5777777 67899999999987665 66644443321122 2 3333445578888888777
No 165
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=20.91 E-value=1.6e+02 Score=27.18 Aligned_cols=76 Identities=8% Similarity=0.129 Sum_probs=50.9
Q ss_pred ceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe
Q 008066 454 TKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVA 533 (579)
Q Consensus 454 ~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a 533 (579)
.+.+.++.|+.|++.+.+. +..|.|-+=.....+ | +-||-.-.+.|.+
T Consensus 139 dn~lvlP~~~~Vr~~vtS~----DViHsf~vP~lg~K~-------------------------D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE----DVLHSWAVPSLGLKT-------------------------D---AIPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEES----SSCEEEEEGGGTEEE-------------------------E---ECTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEeC----cccceeeecccCcEE-------------------------E---ecCCceEEEEEec
Confidence 4567899999999999984 456766654433222 2 2344555678899
Q ss_pred cCceeEEEEecchhhHH-ccceEEEEEec
Q 008066 534 DNPGVWLMHCHLDVHIT-WGLAMAFLVEN 561 (579)
Q Consensus 534 dnpG~wl~HCHi~~H~~-~GM~~~~~V~~ 561 (579)
+.||.+...|.-.-... .-|-..++|.+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEEc
Confidence 99999999998655443 34555555544
Done!