Query 008068
Match_columns 579
No_of_seqs 173 out of 935
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 19:03:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008068.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008068hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 4E-127 9E-132 1048.1 53.6 563 10-578 21-599 (612)
2 PLN02247 indole-3-acetic acid- 100.0 8E-125 2E-129 1032.5 53.9 571 1-578 1-596 (606)
3 PLN02249 indole-3-acetic acid- 100.0 2E-117 3E-122 983.4 54.6 559 9-578 19-588 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 7E-112 2E-116 936.9 41.1 513 13-562 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 3.6E-28 7.8E-33 257.7 26.5 397 16-555 14-433 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 2.5E-27 5.5E-32 258.7 25.8 390 23-533 13-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 6.5E-25 1.4E-29 237.8 26.5 381 22-532 6-409 (422)
8 TIGR02304 aden_form_hyp probab 99.9 4.6E-22 1E-26 215.0 26.5 316 23-484 23-377 (430)
9 PRK07529 AMP-binding domain pr 99.5 4.8E-13 1E-17 152.5 24.0 137 292-451 332-490 (632)
10 PRK06334 long chain fatty acid 99.5 3.9E-13 8.4E-18 150.4 22.7 134 292-451 298-455 (539)
11 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 5.7E-12 1.2E-16 143.3 30.7 228 292-567 357-624 (625)
12 COG1021 EntE Peptide arylation 99.5 2.9E-14 6.4E-19 147.2 10.7 132 293-452 305-460 (542)
13 PRK09274 peptide synthase; Pro 99.5 2.1E-12 4.6E-17 144.2 26.5 142 292-451 287-465 (552)
14 PRK00174 acetyl-CoA synthetase 99.5 7.6E-12 1.7E-16 142.7 31.0 228 292-568 366-632 (637)
15 PRK07788 acyl-CoA synthetase; 99.5 2.9E-12 6.2E-17 143.2 24.9 132 292-451 322-472 (549)
16 PLN02574 4-coumarate--CoA liga 99.5 7.6E-12 1.6E-16 140.4 27.2 133 292-450 318-474 (560)
17 PTZ00237 acetyl-CoA synthetase 99.5 6.8E-12 1.5E-16 143.6 26.6 132 292-451 379-537 (647)
18 PRK13295 cyclohexanecarboxylat 99.5 1.1E-11 2.3E-16 138.7 27.6 132 291-450 310-463 (547)
19 PRK04319 acetyl-CoA synthetase 99.5 1.2E-11 2.5E-16 139.1 27.5 132 292-451 322-477 (570)
20 PRK05677 long-chain-fatty-acid 99.5 2.1E-11 4.6E-16 136.8 29.4 131 292-450 325-477 (562)
21 TIGR01734 D-ala-DACP-lig D-ala 99.5 2E-11 4.2E-16 134.4 27.8 133 291-451 256-418 (502)
22 TIGR02316 propion_prpE propion 99.5 5E-11 1.1E-15 135.8 31.5 133 292-451 353-517 (628)
23 COG0318 CaiC Acyl-CoA syntheta 99.5 5.3E-12 1.1E-16 141.3 23.0 131 294-451 292-446 (534)
24 PRK06155 crotonobetaine/carnit 99.5 2.1E-11 4.5E-16 136.5 27.6 131 293-451 294-445 (542)
25 PRK06060 acyl-CoA synthetase; 99.5 1.9E-11 4.2E-16 141.1 27.9 133 292-451 259-410 (705)
26 PRK07514 malonyl-CoA synthase; 99.5 2.9E-11 6.3E-16 133.1 27.5 135 290-451 266-422 (504)
27 PRK05605 long-chain-fatty-acid 99.4 2.6E-11 5.6E-16 136.2 27.0 133 292-450 335-489 (573)
28 PLN02654 acetate-CoA ligase 99.4 1.6E-10 3.4E-15 132.8 33.8 226 293-567 397-662 (666)
29 TIGR03205 pimA dicarboxylate-- 99.4 3E-11 6.5E-16 134.8 26.1 134 292-451 311-466 (541)
30 PRK09088 acyl-CoA synthetase; 99.4 2E-11 4.2E-16 134.2 24.1 132 292-450 251-405 (488)
31 PRK08314 long-chain-fatty-acid 99.4 6.2E-11 1.3E-15 132.1 28.4 133 292-451 304-461 (546)
32 PRK06164 acyl-CoA synthetase; 99.4 5.9E-11 1.3E-15 132.2 27.9 111 319-451 319-451 (540)
33 PRK10524 prpE propionyl-CoA sy 99.4 1.3E-10 2.7E-15 132.4 31.1 132 293-451 355-518 (629)
34 PRK03584 acetoacetyl-CoA synth 99.4 1.1E-10 2.3E-15 133.8 30.5 227 293-567 383-648 (655)
35 PLN03051 acyl-activating enzym 99.4 5.3E-11 1.2E-15 131.8 26.9 132 292-450 235-401 (499)
36 PRK06145 acyl-CoA synthetase; 99.4 4.9E-11 1.1E-15 131.2 26.0 133 292-451 263-418 (497)
37 PRK07638 acyl-CoA synthetase; 99.4 4.1E-11 8.9E-16 131.7 25.1 128 300-451 258-406 (487)
38 PRK13382 acyl-CoA synthetase; 99.4 3.2E-11 6.9E-16 134.7 24.6 132 292-451 311-461 (537)
39 PRK04813 D-alanine--poly(phosp 99.4 6.8E-11 1.5E-15 129.9 26.8 132 292-451 259-420 (503)
40 PRK08633 2-acyl-glycerophospho 99.4 3.3E-11 7.1E-16 145.9 26.3 134 291-451 896-1064(1146)
41 PRK05852 acyl-CoA synthetase; 99.4 2.4E-11 5.2E-16 135.4 22.8 135 291-451 293-453 (534)
42 PRK06187 long-chain-fatty-acid 99.4 3.4E-11 7.5E-16 132.5 23.4 190 291-527 279-498 (521)
43 PRK12583 acyl-CoA synthetase; 99.4 5.5E-11 1.2E-15 132.7 25.2 159 292-485 316-500 (558)
44 PRK07656 long-chain-fatty-acid 99.4 7.5E-11 1.6E-15 129.9 25.7 131 292-450 280-436 (513)
45 PRK07786 long-chain-fatty-acid 99.4 1.1E-10 2.3E-15 130.5 26.7 130 294-450 291-443 (542)
46 PRK08316 acyl-CoA synthetase; 99.4 1.4E-10 3E-15 128.1 27.1 132 293-451 286-440 (523)
47 TIGR03208 cyc_hxne_CoA_lg cycl 99.4 7.2E-11 1.6E-15 131.6 25.0 132 292-451 309-462 (538)
48 PLN02246 4-coumarate--CoA liga 99.4 1E-10 2.2E-15 130.4 26.2 132 293-450 298-456 (537)
49 COG0365 Acs Acyl-coenzyme A sy 99.4 5.8E-11 1.3E-15 131.3 23.6 133 290-451 287-441 (528)
50 PRK05851 long-chain-fatty-acid 99.4 1.2E-10 2.7E-15 129.6 26.7 63 384-451 366-440 (525)
51 PLN02860 o-succinylbenzoate-Co 99.4 1.7E-11 3.6E-16 137.7 19.6 149 291-451 286-459 (563)
52 PLN02736 long-chain acyl-CoA s 99.4 1.9E-11 4.2E-16 139.9 20.3 135 293-451 376-533 (651)
53 PRK07769 long-chain-fatty-acid 99.4 1.3E-10 2.7E-15 132.5 26.6 63 384-451 412-508 (631)
54 PRK12492 long-chain-fatty-acid 99.4 2.4E-10 5.3E-15 128.3 28.3 130 293-450 333-485 (562)
55 TIGR03098 ligase_PEP_1 acyl-Co 99.4 2.4E-10 5.3E-15 126.0 27.5 133 292-451 273-439 (515)
56 PLN02614 long-chain acyl-CoA s 99.4 1.4E-11 3.1E-16 141.4 18.2 134 293-450 386-541 (666)
57 COG1022 FAA1 Long-chain acyl-C 99.4 7.5E-12 1.6E-16 140.2 14.9 133 294-470 354-506 (613)
58 PRK10946 entE enterobactin syn 99.4 5E-11 1.1E-15 133.1 21.4 132 292-450 299-453 (536)
59 PRK08974 long-chain-fatty-acid 99.4 3.1E-10 6.7E-15 127.2 27.9 132 292-451 324-477 (560)
60 PRK07059 Long-chain-fatty-acid 99.4 2.7E-10 5.8E-15 127.6 27.2 131 293-451 327-480 (557)
61 PRK13383 acyl-CoA synthetase; 99.3 2.5E-10 5.4E-15 126.6 26.6 131 292-450 291-440 (516)
62 PRK07470 acyl-CoA synthetase; 99.3 1.3E-10 2.8E-15 129.1 24.2 132 291-450 278-438 (528)
63 TIGR01733 AA-adenyl-dom amino 99.3 5.1E-11 1.1E-15 127.1 19.5 132 292-450 233-399 (408)
64 PRK07867 acyl-CoA synthetase; 99.3 4.7E-10 1E-14 125.2 28.0 129 294-451 268-426 (529)
65 PLN02387 long-chain-fatty-acid 99.3 5.8E-11 1.3E-15 137.1 21.3 134 293-450 420-580 (696)
66 TIGR02275 DHB_AMP_lig 2,3-dihy 99.3 2.9E-10 6.3E-15 126.4 26.1 132 293-451 299-453 (527)
67 PRK07768 long-chain-fatty-acid 99.3 4.6E-10 9.9E-15 125.3 27.7 132 384-532 380-527 (545)
68 PRK08315 AMP-binding domain pr 99.3 3.9E-10 8.5E-15 126.0 27.2 134 292-451 314-472 (559)
69 PRK08751 putative long-chain f 99.3 9.6E-11 2.1E-15 131.2 22.0 132 292-451 328-482 (560)
70 PRK10252 entF enterobactin syn 99.3 1.3E-10 2.9E-15 142.6 25.1 131 293-451 717-882 (1296)
71 PRK06839 acyl-CoA synthetase; 99.3 4.6E-10 1E-14 123.2 26.5 131 292-451 263-416 (496)
72 KOG1176 Acyl-CoA synthetase [L 99.3 1.5E-10 3.2E-15 128.6 22.2 133 292-451 298-453 (537)
73 TIGR01217 ac_ac_CoA_syn acetoa 99.3 6.6E-10 1.4E-14 127.4 28.1 223 293-567 384-646 (652)
74 PRK07787 acyl-CoA synthetase; 99.3 2.4E-10 5.3E-15 125.2 23.6 132 292-450 240-395 (471)
75 TIGR03443 alpha_am_amid L-amin 99.3 3.9E-11 8.4E-16 148.5 19.1 135 292-451 528-723 (1389)
76 PRK08043 bifunctional acyl-[ac 99.3 3.1E-10 6.8E-15 131.4 25.3 127 293-451 479-636 (718)
77 PLN02330 4-coumarate--CoA liga 99.3 3.8E-10 8.3E-15 126.1 24.6 129 300-451 307-462 (546)
78 PRK13388 acyl-CoA synthetase; 99.3 7.2E-10 1.6E-14 124.0 26.6 128 307-450 277-424 (540)
79 PRK12467 peptide synthase; Pro 99.3 3.7E-11 7.9E-16 160.7 18.9 133 292-451 3350-3516(3956)
80 PRK12406 long-chain-fatty-acid 99.3 6.2E-10 1.3E-14 123.1 25.6 130 293-450 271-423 (509)
81 PRK12467 peptide synthase; Pro 99.3 1.7E-10 3.8E-15 154.4 24.4 131 293-450 771-934 (3956)
82 PLN02861 long-chain-fatty-acid 99.3 4.6E-11 9.9E-16 137.1 16.4 133 294-450 384-538 (660)
83 PRK05857 acyl-CoA synthetase; 99.3 3E-10 6.4E-15 127.0 22.5 136 292-450 285-446 (540)
84 TIGR02262 benz_CoA_lig benzoat 99.3 1.1E-09 2.5E-14 121.0 26.9 131 293-451 278-429 (508)
85 PRK06188 acyl-CoA synthetase; 99.3 5.2E-10 1.1E-14 124.1 23.9 131 292-450 280-437 (524)
86 PRK06710 long-chain-fatty-acid 99.3 3.5E-10 7.5E-15 126.9 22.3 132 293-451 323-476 (563)
87 PRK06087 short chain acyl-CoA 99.3 8.4E-10 1.8E-14 123.3 25.0 130 292-450 301-454 (547)
88 PRK12316 peptide synthase; Pro 99.3 2.2E-10 4.7E-15 156.1 24.0 133 292-451 2260-2426(5163)
89 PTZ00342 acyl-CoA synthetase; 99.3 8.6E-10 1.9E-14 128.0 25.5 132 293-450 461-615 (746)
90 PRK08279 long-chain-acyl-CoA s 99.3 1.5E-09 3.2E-14 122.9 26.8 143 292-450 313-483 (600)
91 PRK03640 O-succinylbenzoic aci 99.3 1.3E-09 2.9E-14 119.3 25.5 128 293-450 254-404 (483)
92 PRK08180 feruloyl-CoA synthase 99.3 5.6E-10 1.2E-14 126.9 23.0 130 291-450 332-491 (614)
93 PRK12316 peptide synthase; Pro 99.2 2.2E-10 4.9E-15 156.0 22.7 133 292-451 769-931 (5163)
94 PRK09192 acyl-CoA synthetase; 99.2 1.9E-09 4.2E-14 121.5 26.1 63 384-451 405-483 (579)
95 PRK05691 peptide synthase; Val 99.2 5.8E-10 1.3E-14 150.5 25.3 133 292-451 1387-1550(4334)
96 PRK07824 O-succinylbenzoic aci 99.2 2.3E-09 5E-14 113.3 24.5 44 403-451 235-278 (358)
97 PRK08276 long-chain-fatty-acid 99.2 2.6E-09 5.6E-14 117.8 25.9 131 292-451 261-414 (502)
98 PRK08308 acyl-CoA synthetase; 99.2 3.7E-09 8E-14 114.1 26.4 59 387-451 278-336 (414)
99 PLN03052 acetate--CoA ligase; 99.2 1.3E-09 2.9E-14 126.4 24.4 132 292-450 470-633 (728)
100 PRK08008 caiC putative crotono 99.2 3.8E-09 8.2E-14 116.9 26.7 130 293-450 288-442 (517)
101 PLN03102 acyl-activating enzym 99.2 2E-09 4.3E-14 121.6 24.5 60 388-451 390-465 (579)
102 PRK06814 acylglycerophosphoeth 99.2 2E-09 4.3E-14 130.8 25.9 127 293-451 907-1055(1140)
103 KOG1177 Long chain fatty acid 99.2 1.1E-10 2.5E-15 123.5 13.0 63 384-450 426-505 (596)
104 PRK05850 acyl-CoA synthetase; 99.2 6.5E-09 1.4E-13 117.0 27.8 63 384-451 391-481 (578)
105 TIGR01923 menE O-succinylbenzo 99.2 3.6E-09 7.7E-14 114.2 24.5 58 389-450 291-364 (436)
106 PF00501 AMP-binding: AMP-bind 99.2 7.7E-10 1.7E-14 118.7 18.0 119 291-435 275-417 (417)
107 PLN02430 long-chain-fatty-acid 99.2 1.3E-09 2.9E-14 125.1 21.1 132 293-450 383-538 (660)
108 PRK07008 long-chain-fatty-acid 99.2 3.8E-09 8.3E-14 118.0 23.7 133 292-450 292-453 (539)
109 PRK05691 peptide synthase; Val 99.1 1E-09 2.2E-14 148.2 21.4 133 292-451 3982-4147(4334)
110 PRK12582 acyl-CoA synthetase; 99.1 9.8E-10 2.1E-14 125.2 18.2 128 292-449 345-502 (624)
111 KOG1256 Long-chain acyl-CoA sy 99.1 5.7E-10 1.2E-14 124.4 15.5 134 290-450 416-572 (691)
112 PTZ00216 acyl-CoA synthetase; 99.1 3.6E-10 7.9E-15 130.6 14.7 132 293-451 428-582 (700)
113 PRK05620 long-chain-fatty-acid 99.1 1E-08 2.3E-13 115.4 26.2 131 294-451 299-475 (576)
114 PRK07445 O-succinylbenzoic aci 99.1 4.1E-09 8.9E-14 115.6 21.4 61 387-451 298-369 (452)
115 PRK06178 acyl-CoA synthetase; 99.1 1.9E-08 4E-13 113.0 26.8 121 307-450 341-486 (567)
116 KOG1175 Acyl-CoA synthetase [L 99.1 6.2E-09 1.3E-13 116.2 21.4 232 293-569 359-624 (626)
117 PRK06018 putative acyl-CoA syn 99.1 2.4E-08 5.3E-13 111.6 26.0 132 292-450 293-454 (542)
118 PRK09029 O-succinylbenzoic aci 99.0 7.9E-08 1.7E-12 105.0 24.2 44 403-451 333-376 (458)
119 PRK08162 acyl-CoA synthetase; 99.0 5.2E-08 1.1E-12 108.7 22.7 59 389-451 387-461 (545)
120 PRK12476 putative fatty-acid-- 98.9 1.3E-08 2.9E-13 115.7 16.5 131 384-532 423-588 (612)
121 PLN02479 acetate-CoA ligase 98.9 3.8E-08 8.2E-13 110.8 17.6 58 389-450 401-474 (567)
122 PRK13391 acyl-CoA synthetase; 98.9 6.9E-08 1.5E-12 107.0 18.7 130 293-451 275-427 (511)
123 TIGR02372 4_coum_CoA_lig 4-cou 98.9 2.7E-07 5.8E-12 99.5 22.3 45 403-451 276-320 (386)
124 PRK07868 acyl-CoA synthetase; 98.8 1E-07 2.2E-12 114.5 18.5 146 292-451 719-881 (994)
125 PRK13390 acyl-CoA synthetase; 98.8 2E-07 4.3E-12 103.0 18.7 129 293-450 270-423 (501)
126 PRK07798 acyl-CoA synthetase; 98.8 2.6E-07 5.7E-12 102.1 18.8 133 293-451 296-453 (533)
127 KOG1180 Acyl-CoA synthetase [L 98.7 7.8E-07 1.7E-11 96.3 18.4 160 268-472 390-574 (678)
128 PF04443 LuxE: Acyl-protein sy 98.5 6.2E-06 1.3E-10 88.0 17.5 80 25-118 30-116 (365)
129 KOG1179 Very long-chain acyl-C 98.2 6.5E-05 1.4E-09 82.1 16.9 222 307-554 369-623 (649)
130 COG1020 EntF Non-ribosomal pep 97.5 0.0047 1E-07 70.7 18.1 63 384-450 561-640 (642)
131 PTZ00297 pantothenate kinase; 96.4 0.052 1.1E-06 67.6 15.6 56 390-450 825-881 (1452)
132 PF14535 AMP-binding_C_2: AMP- 95.8 0.0093 2E-07 51.4 3.6 82 436-533 1-84 (96)
133 PRK09188 serine/threonine prot 95.1 0.13 2.8E-06 55.2 10.3 40 403-451 210-252 (365)
134 KOG1178 Non-ribosomal peptide 75.3 5.7 0.00012 48.0 6.5 45 403-451 455-499 (1032)
135 KOG3628 Predicted AMP-binding 58.5 53 0.0011 39.9 9.7 127 384-533 1174-1334(1363)
136 cd04931 ACT_PAH ACT domain of 58.5 58 0.0013 27.7 7.7 58 441-504 25-82 (90)
137 PRK12476 putative fatty-acid-- 56.9 11 0.00023 43.0 3.9 27 90-117 193-219 (612)
138 PF01797 Y1_Tnp: Transposase I 48.7 89 0.0019 27.2 7.7 102 423-537 7-117 (121)
139 cd04880 ACT_AAAH-PDT-like ACT 43.9 1.5E+02 0.0033 23.4 7.8 56 442-502 11-66 (75)
140 PRK07798 acyl-CoA synthetase; 41.5 13 0.00028 40.9 1.3 23 94-117 167-189 (533)
141 KOG1179 Very long-chain acyl-C 40.6 16 0.00034 41.2 1.7 31 386-416 484-520 (649)
142 PF11454 DUF3016: Protein of u 37.7 87 0.0019 29.0 5.9 56 385-442 47-112 (141)
143 PF09926 DUF2158: Uncharacteri 36.1 34 0.00073 26.2 2.5 19 404-425 1-19 (53)
144 COG5475 Uncharacterized small 35.9 39 0.00085 26.1 2.7 24 404-430 5-28 (60)
145 PRK11899 prephenate dehydratas 34.0 3E+02 0.0065 28.5 9.9 57 441-502 205-261 (279)
146 PF12401 DUF3662: Protein of u 32.2 56 0.0012 29.1 3.6 86 434-530 19-106 (116)
147 PRK11898 prephenate dehydratas 31.3 3.1E+02 0.0067 28.4 9.5 57 441-502 208-264 (283)
148 cd04904 ACT_AAAH ACT domain of 31.1 2.6E+02 0.0056 22.4 7.2 54 441-501 11-64 (74)
149 cd04905 ACT_CM-PDT C-terminal 29.6 3E+02 0.0065 22.1 7.9 55 443-502 14-68 (80)
150 PRK04306 50S ribosomal protein 27.3 45 0.00098 28.9 2.1 36 402-437 33-71 (98)
151 COG0077 PheA Prephenate dehydr 27.3 3.9E+02 0.0085 27.7 9.2 56 441-501 205-260 (279)
152 COG2139 RPL21A Ribosomal prote 26.4 50 0.0011 28.4 2.2 36 401-436 30-68 (98)
153 PRK13390 acyl-CoA synthetase; 26.1 33 0.00071 37.7 1.3 19 93-112 151-169 (501)
154 cd03483 MutL_Trans_MLH1 MutL_T 25.4 3.1E+02 0.0067 24.6 7.3 44 408-453 30-73 (127)
155 PTZ00189 60S ribosomal protein 25.4 57 0.0012 30.8 2.5 34 403-436 33-69 (160)
156 cd04866 LigD_Pol_like_3 LigD_P 25.2 42 0.00092 33.5 1.8 48 87-135 122-171 (223)
157 cd04861 LigD_Pol_like LigD_Pol 23.1 50 0.0011 33.1 1.8 46 89-135 129-175 (227)
158 TIGR02778 ligD_pol DNA polymer 23.0 51 0.0011 33.4 1.8 48 87-135 143-191 (245)
159 CHL00123 rps6 ribosomal protei 22.9 3.8E+02 0.0083 22.9 7.1 49 436-485 15-70 (97)
160 PRK10622 pheA bifunctional cho 22.6 5.3E+02 0.011 28.0 9.7 58 440-502 307-364 (386)
161 PRK13391 acyl-CoA synthetase; 20.5 84 0.0018 34.6 3.2 19 93-112 157-175 (511)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4e-127 Score=1048.12 Aligned_cols=563 Identities=40% Similarity=0.738 Sum_probs=529.5
Q ss_pred hHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCccC
Q 008068 10 VDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTG 89 (579)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll~~ 89 (579)
+++.++.+|..++||.++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+||++||.++|||+
T Consensus 21 ~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~s~vL~~ 100 (612)
T PLN02620 21 NKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIANGDTSPILCS 100 (612)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCCccCC
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999997799999
Q ss_pred CCcceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeEecccccccc
Q 008068 90 KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYR 168 (579)
Q Consensus 90 ~pi~~f~~TSGTT~G~~K~iP~t~~~l~~~~~~~~~~~~~l~~~~p-~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~ 168 (579)
+||.+|++|||||+|++|+||+|+++++.++.++.+|..++++.+| +..||.+++++.+.+.+|++|||+|++|+.+++
T Consensus 101 ~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~st~~y~ 180 (612)
T PLN02620 101 KPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYK 180 (612)
T ss_pred CChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccccchhhh
Confidence 9999999999999889999999999998888888999999999888 889999999999999999999999999999999
Q ss_pred CchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcccC
Q 008068 169 SSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLS 248 (579)
Q Consensus 169 ~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI~~g~~~ 248 (579)
+.+|+.++..+...|++|.+++.++|..+++||||||+|.++++|..++++|+++|+.++++|+++|++||+||++|+++
T Consensus 181 s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI~~G~ls 260 (612)
T PLN02620 181 SSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGTID 260 (612)
T ss_pred hhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99998877766678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhCCCCeeccccc
Q 008068 249 SRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYG 328 (579)
Q Consensus 249 ~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~~~~~~~~l~~~~g~v~v~~~~Yg 328 (579)
.+++++++|+++.+.|+|+|++|++|+++|.+. +|+|++++|||||++|+||++|+|++|.+.|+.|+||+|+++.+|+
T Consensus 261 ~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~-~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ 339 (612)
T PLN02620 261 SQITDPSVREAVMKILKPDPKLADFVEAECRKE-SWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYA 339 (612)
T ss_pred ccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccc-cccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCcccccccc
Confidence 999999999999999999999999999999984 9999999999999999999999999999999999999999999999
Q ss_pred cCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccc----------cccCCCccccccccCCCceEEEEEccc
Q 008068 329 SSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ----------VLCIEPKPVGLTEVKVGEEYEIIVTNV 398 (579)
Q Consensus 329 aSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~----------~~~~~~~~l~~~eve~G~~yeLVvTt~ 398 (579)
||||.+|+|++|.|+++...|+++|+.+||||||.+ +.+.. +..+++++|+++||+.|+.|||||||+
T Consensus 340 ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~ 417 (612)
T PLN02620 340 SSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVH--RNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTY 417 (612)
T ss_pred ccceEEEeccCCCCCcccceeeecCCcEEEEEeecc--CcccccccccccccccccccCccccHHHccCCCeEEEEEEec
Confidence 999999999999998877899999999999999976 32100 001346789999999999999999999
Q ss_pred cceeccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceE
Q 008068 399 AGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHY 478 (579)
Q Consensus 399 ~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y 478 (579)
+||||||+||||+|+||||++|+|+|++|.+.++++.|||++|++|..||.+|...|...++.|+||++.+|.+..||||
T Consensus 418 ~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~PghY 497 (612)
T PLN02620 418 AGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPGHY 497 (612)
T ss_pred CceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999987755689999999999988899999
Q ss_pred EEEEEec--cC--CCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCcc
Q 008068 479 VIFWEVS--GE--VNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRC 553 (579)
Q Consensus 479 ~~~vE~~--~~--~~~~~l~~~~~~ld~~L~n~~Y~~~R~~~-~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~ 553 (579)
++|||+. ++ ++.+.+++||..||++| |.+|+.+|..+ .|+|++|++|++|||+.++++++++|++.+|||+|||
T Consensus 498 vl~~El~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~Pr~ 576 (612)
T PLN02620 498 VLFWELCLNGSTPIPPSVFEDCCLTIEESL-NSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRC 576 (612)
T ss_pred EEEEEEecCCCCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccCceE
Confidence 9999983 22 45678999999999997 99999999987 5999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhcccceeecccCC
Q 008068 554 VGPTNKTVLQILCNNIGKSYFSTAY 578 (579)
Q Consensus 554 ~~~~~~~~~~~l~~~~~~~~~~~~~ 578 (579)
++ +++++++|+++|+++|+|+++
T Consensus 577 v~--~~~~~~~l~~~v~~~~~s~~~ 599 (612)
T PLN02620 577 VK--FAPIIELLNSRVVSNYFSPKC 599 (612)
T ss_pred ec--CHHHHHHHHhhhheeeccccC
Confidence 99 999999999999999999875
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=8e-125 Score=1032.47 Aligned_cols=571 Identities=40% Similarity=0.714 Sum_probs=531.3
Q ss_pred CCccccCCChHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhc
Q 008068 1 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80 (579)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~ 80 (579)
|||..|..++++.++.+|..++||.++|+++|++||+.|++|+|||+|+| +|.++++||++|||++|||++|||+||++
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~ 79 (606)
T PLN02247 1 MLPSYDPNDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIAN 79 (606)
T ss_pred CCCccCCcchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHc
Confidence 89999999999999999999999999999999999999999999999855 89999999999999999999999999999
Q ss_pred CCCCCCccCCCcceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeE
Q 008068 81 GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNA 159 (579)
Q Consensus 81 Ge~~~ll~~~pi~~f~~TSGTT~G~~K~iP~t~~~l~~~~~~~~~~~~~l~~~~p-~~~gk~l~~~~~~~~~~t~~Gi~~ 159 (579)
||.+++++++||.+|++|||||+|++|+||+|++++.....++.+|..++++..| +..||.+++++.+++.+|++|+|+
T Consensus 80 Ge~~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~ 159 (606)
T PLN02247 80 GESSSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMA 159 (606)
T ss_pred CCCCceeCCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCccc
Confidence 9965667799999999999999889999999999998877778899999999777 889999999999999999999999
Q ss_pred eccccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHH
Q 008068 160 GTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239 (579)
Q Consensus 160 g~~S~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~ 239 (579)
|++++.++++.+|+.++......|++|.+++.++|..+++||||||+|.+++++..++++|++++++++++|+++|++||
T Consensus 160 g~~~t~y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~ 239 (606)
T PLN02247 160 RPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELC 239 (606)
T ss_pred ccccchhhccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHH
Confidence 99999999999888777654568999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHhcccCCCCCchHHHHHhhccC-CCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhC
Q 008068 240 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG 318 (579)
Q Consensus 240 ~dI~~g~~~~~~~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~~~~~~~~l~~~~g 318 (579)
+||++|+++.++++|++|+++.+.+ +|+|++|++|+++|.+. ||.|++++|||||++|+||++|+|++|.+.|+.|+|
T Consensus 240 ~DI~~G~ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~-~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~g 318 (606)
T PLN02247 240 SNIRTGCVSDWITDPSCRNAVSSILSKPNSELADLIESECSGK-SWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSG 318 (606)
T ss_pred HHHhcCCcccccCCHHHHHHHhhcccCCCHHHHHHHHHHhccc-CccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcC
Confidence 9999999999999999999999999 69999999999999885 999999999999999999999999999999999999
Q ss_pred CCCeeccccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccc----------c-----ccCCCcccccc
Q 008068 319 DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ----------V-----LCIEPKPVGLT 383 (579)
Q Consensus 319 ~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~----------~-----~~~~~~~l~~~ 383 (579)
|+|+++.+|+||||.+|+|++|.|+++...|+++|+.+||||||.+ +.+.+ . .++++.+|+++
T Consensus 319 glpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 396 (606)
T PLN02247 319 GLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVD--KNNGEVIHFVQCNGTDDDDDALKEDLEIVDLV 396 (606)
T ss_pred CCceecccccccceEEEeccCcCCCccCCceeecCCcEEEEEeecC--CCcccccccccccccccccccccccCceecHH
Confidence 9999999999999999999999988777899999999999999976 32110 0 01245699999
Q ss_pred ccCCCceEEEEEccccceeccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeE
Q 008068 384 EVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVV 463 (579)
Q Consensus 384 eve~G~~yeLVvTt~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~ 463 (579)
||+.|+.|||||||++||||||+||||+|+||||++|+|+|+||.+.++++.|||++|+++..||.+|...++..++.++
T Consensus 397 evk~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~ 476 (606)
T PLN02247 397 DVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLT 476 (606)
T ss_pred HccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876655688999
Q ss_pred eeEEeecCCCCCceEEEEEEecc-------CCCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccchHHHHH
Q 008068 464 DFTSHVDLSTDPGHYVIFWEVSG-------EVNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQIL 535 (579)
Q Consensus 464 ~f~~~~~~~~~~~~y~~~vE~~~-------~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~~-~l~p~~v~~v~~gtf~~~~ 535 (579)
||++.+|.++.||||++|||+.. +.+...+++||..||++| |.+|+.+|..+ +|+|++|++|++|||+.++
T Consensus 477 d~ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~~igPLeirvv~~GtF~~l~ 555 (606)
T PLN02247 477 EYTSYADTSSIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESL-DSVYRRCRKRDKSIGPLEIRVVKHGTFDALM 555 (606)
T ss_pred eeecccccCCCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHh-hHHHHHHhhccCcCCCcEEEEeCCChHHHHH
Confidence 99999998889999999999952 124568899999999997 99999999995 9999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCcccCCCCHHHHHHHhcccceeecccCC
Q 008068 536 DHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTAY 578 (579)
Q Consensus 536 ~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~~~~~~~~~~~ 578 (579)
++++++|++.+|||+|||++ +++++++|+++|+++|+|+++
T Consensus 556 ~~~~~~G~s~~Q~K~Pr~v~--~~~~~~~l~~~v~~~~~s~~~ 596 (606)
T PLN02247 556 DFCVSQGSSVNQYKTPRCIK--SEEALKILDSRVIGRFFSKRV 596 (606)
T ss_pred HHHHHcCCCcccccCceEec--CHHHHHHHHhhhheeeccccC
Confidence 99999999999999999999 999999999999999999875
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=1.6e-117 Score=983.41 Aligned_cols=559 Identities=41% Similarity=0.732 Sum_probs=512.1
Q ss_pred ChHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCcc
Q 008068 9 DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILT 88 (579)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll~ 88 (579)
++++.++.++..++||.++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+||++||.++|||
T Consensus 19 ~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~~~vL~ 98 (597)
T PLN02249 19 KDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRSPILS 98 (597)
T ss_pred cHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCceeC
Confidence 44677899999999999999999999999999999999999999999999999999999999999999999998677999
Q ss_pred CCCcceeecccccCCCCcccccCChHHHH--HHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeEeccccc
Q 008068 89 GKPITTISRSSGTTQGKPKFLPFNDELME--TTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTN 165 (579)
Q Consensus 89 ~~pi~~f~~TSGTT~G~~K~iP~t~~~l~--~~~~~~~~~~~~l~~~~p-~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~ 165 (579)
++||.+|++|||||+|++|+||+|++++. .+..++..|. .+..+| +..||.|++++.+.+.+|++|+|+|++++.
T Consensus 99 ~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~~--~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~~~~~~ 176 (597)
T PLN02249 99 SHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPV--MNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTS 176 (597)
T ss_pred CCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHHH--HhccCCccccCcEEEEEeccccccCCCCCccCccccc
Confidence 99999999999999999999999999997 3444465653 333356 888999998989989999999999999988
Q ss_pred cccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 008068 166 VYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 245 (579)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI~~g 245 (579)
++++..|+..+. ...|++|.+++.+.|..+++||||||||..++++..|++.||+.++.++++++++|+++|+||++|
T Consensus 177 ~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI~~g 254 (597)
T PLN02249 177 YYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTG 254 (597)
T ss_pred cccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 777776655443 567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhhccC-CCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhCCCCeec
Q 008068 246 VLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMS 324 (579)
Q Consensus 246 ~~~~~~~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~~~~~~~~l~~~~g~v~v~~ 324 (579)
+++.++++|++|+.|..++ .|+|++|++++++|.+. +|+|++++|||||++|+||++||+.+|++.+++++|++++++
T Consensus 255 ~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~-~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~~~~ 333 (597)
T PLN02249 255 TLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQE-NWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMAS 333 (597)
T ss_pred CCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccc-cccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCcccc
Confidence 9999999999999998888 79999999999999874 799999999999999999999999999999999999999999
Q ss_pred cccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEccccceecc
Q 008068 325 ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRY 404 (579)
Q Consensus 325 ~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~~Gl~RY 404 (579)
.+|+||||++|+|+++.|+++..+|+++++++||||||.+ +.++ ...+++++|+++|||.|+.|||||||++|||||
T Consensus 334 ~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~--~~~~-~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLyRY 410 (597)
T PLN02249 334 TIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHN--HDGD-GALDETSLVELADVEVGKEYELVITTYAGLYRY 410 (597)
T ss_pred ccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecc--cCCc-ccCCCCcEecHHHcCCCCeEEEEEEcccceeEe
Confidence 9999999999999998887777899999999999999986 3321 001356799999999999999999999999999
Q ss_pred ccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEe
Q 008068 405 RLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEV 484 (579)
Q Consensus 405 r~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~ 484 (579)
++||+|+|+||+|++|+|+|+||++.++|+.|||++|++++.||.++...++..++.|.||++.++.++.|+||++|||+
T Consensus 411 ~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p~Hyvl~wei 490 (597)
T PLN02249 411 RVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYWEL 490 (597)
T ss_pred ecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999998766656799999999988877779999999999
Q ss_pred c-cC-----CCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 008068 485 S-GE-----VNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPT 557 (579)
Q Consensus 485 ~-~~-----~~~~~l~~~~~~ld~~L~n~~Y~~~R~~~-~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~ 557 (579)
. .+ .+.+.+++||+.++++| |.+|+++|..+ +|+||+|++|++|+|.+|+++++++|++.||||+|||++
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~e~~l-n~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~-- 567 (597)
T PLN02249 491 LGRDQSNALPSDEVMAKCCLEMEESL-NSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVS-- 567 (597)
T ss_pred eccccccCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeC--
Confidence 3 21 45678889999999997 99999999885 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHhcccceeecccCC
Q 008068 558 NKTVLQILCNNIGKSYFSTAY 578 (579)
Q Consensus 558 ~~~~~~~l~~~~~~~~~~~~~ 578 (579)
+++++++|+++|+++|+|+++
T Consensus 568 ~~~~~~~l~~~~~~~~~~~~~ 588 (597)
T PLN02249 568 LTPIMELLDSRVVSAHFSPSL 588 (597)
T ss_pred CHHHHHHHHhhhheeeccccC
Confidence 999999999999999999875
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=7.1e-112 Score=936.93 Aligned_cols=513 Identities=38% Similarity=0.671 Sum_probs=407.8
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHcCCChhhHhcCCCCCCChhh--hhhcCCCcccccchHHHHHHhcCCCCCCccCC
Q 008068 13 LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPES--FKSCVPLVTHEDLQPYIQRIIDGDISPILTGK 90 (579)
Q Consensus 13 ~~~~~~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~ed--F~~~vPl~~Yed~~p~ier~~~Ge~~~ll~~~ 90 (579)
.+++|+++++||+++|+++|++||+.|++|+|||+|||++|+|++| ||++|||++||||+|||+||++|| .+|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge-~~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGE-ENVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCC-CCCCCCC
Confidence 4789999999999999999999999999999999999999999999 999999999999999999999999 5699999
Q ss_pred CcceeecccccCCCCcccccCChHHHHHHH--HHHHHHHHHHhccCC-C-CCCce--EEEeecccccccCCCCeEecccc
Q 008068 91 PITTISRSSGTTQGKPKFLPFNDELMETTL--QIFRTSYAFRNREFP-I-GKGKA--LQFIYGSKQSKTKGGLNAGTATT 164 (579)
Q Consensus 91 pi~~f~~TSGTT~G~~K~iP~t~~~l~~~~--~~~~~~~~~l~~~~p-~-~~gk~--l~~~~~~~~~~t~~Gi~~g~~S~ 164 (579)
|+.+|+.|||||++++|+||+|++++..+. .++..|+.++.+++| . ..||. +.+.+.+....|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999444999999999998866 457788888999999 5 57884 44445578899999999999999
Q ss_pred ccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHh
Q 008068 165 NVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244 (579)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI~~ 244 (579)
+++++ .+.++..+|++|.+++.+.|.++++||||+|+|.++++|++|+++||++|+.++++++++|+++|+||++
T Consensus 161 ~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~ 235 (528)
T PF03321_consen 161 IPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRD 235 (528)
T ss_dssp HHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcC
Confidence 88874 2333345899999999999999999999999999889999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhCCCCeec
Q 008068 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMS 324 (579)
Q Consensus 245 g~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~~~~~~~~l~~~~g~v~v~~ 324 (579)
|+++ .++|+|+||++|+++|.+ + .+++++|||||++|+||++|++.+|+++|++++|++++++
T Consensus 236 G~~~--------------~~~p~p~rA~~L~~~~~~--~-~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~ 298 (528)
T PF03321_consen 236 GTLS--------------LLRPNPERAAELRAEFEK--G-RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQS 298 (528)
T ss_dssp TS----------------C-S--HHHHHHHHHHHCC--S-TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE
T ss_pred Cccc--------------cCCCCHHHHHHHHHhhcc--c-CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceee
Confidence 9995 457999999999999998 6 7899999999999999999999999999999999999999
Q ss_pred cccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEccccceecc
Q 008068 325 ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRY 404 (579)
Q Consensus 325 ~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~~Gl~RY 404 (579)
.+|+||||++|+|++++. .+|++.++.+||||||.+ +.+++ ..+++++++++||+.|+.|||||||.+|||||
T Consensus 299 ~~y~ASEg~i~i~~~~~~----~~~~l~~~~~ffEFip~~--~~~~~-~~~~~~~l~~~ele~G~~YelviTt~~GLyRY 371 (528)
T PF03321_consen 299 KGYGASEGFIGIPLDPED----PGYVLAPDSGFFEFIPVD--EDEQN-PSEQPKTLLLHELEVGEEYELVITTNSGLYRY 371 (528)
T ss_dssp -EEEETTEEEEEES-CCC------EEE-TTSSEEEEEE-S--TT--------SSSEEGGG--TT-EEEEEEESTTS-SSE
T ss_pred ccccccceEEEEecCCCC----CceEeecCCeEEEEEecc--CCccc-ccCCCceecHHHhcCCCeEEEEEecccceeee
Confidence 999999999999987543 468889999999999998 43200 01468999999999999999999999999999
Q ss_pred ccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEE
Q 008068 405 RLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWE 483 (579)
Q Consensus 405 r~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE 483 (579)
|+||||+|+||++++|+|+|+||.++++|+.|||++|.+|+.||.++++ +.|+++.+|++.++ .++.+|||++|||
T Consensus 372 ~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~~Y~~~~e 448 (528)
T PF03321_consen 372 RIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPPHYVLFWE 448 (528)
T ss_dssp EECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSBEEEEEEE
T ss_pred ecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999975 78999999999999 6788999999999
Q ss_pred eccCCCHHHHHHHHHHHHHhc--cChhhHHHhhc-CCcCCeEEEEeccchHHHHHHHHhcC-CCCCCCCCCCcccCCCCH
Q 008068 484 VSGEVNDEVLKECCNCLDRSF--VDAGYVSARKV-NAIGPLELRVVLKGTFQQILDHYLGL-GAALSQFKTPRCVGPTNK 559 (579)
Q Consensus 484 ~~~~~~~~~l~~~~~~ld~~L--~n~~Y~~~R~~-~~l~p~~v~~v~~gtf~~~~~~~~~~-G~~~~Q~K~Pr~~~~~~~ 559 (579)
+... .+.++.|++.||++| .|++|+.+|+. |+|+||+|++|++|+|++|+++++++ |++.+|||+|||++ ++
T Consensus 449 ~~~~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~--~~ 524 (528)
T PF03321_consen 449 LEGE--PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIR--DR 524 (528)
T ss_dssp ECS---HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS----TC
T ss_pred eCCC--chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccC--cc
Confidence 9655 458889999999998 59999999999 99999999999999999999999999 99999999999999 88
Q ss_pred HHH
Q 008068 560 TVL 562 (579)
Q Consensus 560 ~~~ 562 (579)
++.
T Consensus 525 ~~~ 527 (528)
T PF03321_consen 525 EFV 527 (528)
T ss_dssp HHH
T ss_pred ccC
Confidence 774
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=3.6e-28 Score=257.72 Aligned_cols=397 Identities=18% Similarity=0.221 Sum_probs=255.4
Q ss_pred HHHHHHhc-HHHHHHHHHHHHHHH-cCCChhhHhc----CC--CCCCChhhhhhcCCCcccccchHHHH-HHhcCCCCCC
Q 008068 16 EFETITKD-AERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQ-RIIDGDISPI 86 (579)
Q Consensus 16 ~~~~~~~~-~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~i~s~edF~~~vPl~~Yed~~p~ie-r~~~Ge~~~l 86 (579)
+.+.+.++ .++.|++.|+.+++. .+|++|||++ |+ +.|.+.+|+. ++|++++++++.... ++.+...
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~~~--- 89 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAVPK--- 89 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccccc---
Confidence 44555544 889999999999997 8999999997 55 4789999998 799999999998877 6665542
Q ss_pred ccCCCcceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeecccccccCCCCeEecccccc
Q 008068 87 LTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNV 166 (579)
Q Consensus 87 l~~~pi~~f~~TSGTT~G~~K~iP~t~~~l~~~~~~~~~~~~~l~~~~p~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~ 166 (579)
+.+.++..||||| |+|+.+|+|...+......+...+. . .....|..+....+ -+...+|+ .
T Consensus 90 ---~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~---~-~g~~~gd~v~~~~~--yGl~tgg~--------~ 151 (438)
T COG1541 90 ---EEIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLY---S-AGVRKGDKVQNAYG--YGLFTGGL--------G 151 (438)
T ss_pred ---cceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHH---H-ccCCCCCEEEEEee--eccccCCc--------h
Confidence 4455689999999 9999999998766432221111111 0 01233433332222 11111110 0
Q ss_pred ccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 008068 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246 (579)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI~~g~ 246 (579)
... .... ......|. ++ .+-+.-++.|.+-.
T Consensus 152 ~~~-----ga~r-ig~~vip~--------------------------------~~-----------g~~~~~~~l~~df~ 182 (438)
T COG1541 152 LHY-----GAER-IGATVIPI--------------------------------SG-----------GNTERQLELMKDFK 182 (438)
T ss_pred hHH-----HHHh-hCEEEEcc--------------------------------CC-----------ccHHHHHHHHHhcC
Confidence 000 0000 00001111 11 01111122222222
Q ss_pred cCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCCCCee
Q 008068 247 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLM 323 (579)
Q Consensus 247 ~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~ 323 (579)
+ ..|.+.++-...+|+++++. |..+.-. +++ .++.|+ .+..++.+++.| |++++
T Consensus 183 ~----------tvI~~tps~~l~lae~~~~~--------G~~~~~~-~lk---~~i~gaE~~see~R~~ie~~~-g~~~~ 239 (438)
T COG1541 183 P----------TVIAATPSYLLYLAEEAEEE--------GIDPDKL-SLK---KGIFGAEPWSEEMRKVIENRF-GCKAF 239 (438)
T ss_pred C----------cEEEEChHHHHHHHHHHHHc--------CCChhhc-cee---EEEEecccCCHHHHHHHHHHh-CCcee
Confidence 2 12344444444566666543 3233222 467 667776 588999999999 68998
Q ss_pred ccccccCccc-ceecCCCCCCcccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEccc----
Q 008068 324 SADYGSSEGW-IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---- 398 (579)
Q Consensus 324 ~~~YgaSEg~-i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---- 398 (579)
+.||+||++ .| . .+|+... ++|++.|..++|.++++ +++ .|..|+.||||+||+
T Consensus 240 -diYGltE~~g~g-~--~eC~~~~-glhi~eD~~~~Ei~dP~-----------t~e-----~l~dge~GelV~T~L~~~~ 298 (438)
T COG1541 240 -DIYGLTEGFGPG-A--GECTERN-GLHIWEDHFIFEIVDPE-----------TGE-----QLPDGERGELVITTLTKEG 298 (438)
T ss_pred -eccccccccCCc-c--ccccccc-CCCcchhhceeeeecCC-----------cCc-----cCCCCCeeEEEEEeccccC
Confidence 999999984 44 2 4566544 79999999999999886 223 457899999999996
Q ss_pred cceeccccCCEEEEeceeCCCC----E-EEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCC
Q 008068 399 AGLYRYRLGDVVKVMGFHNSTP----E-LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLST 473 (579)
Q Consensus 399 ~Gl~RYr~GDvv~v~~~~~~~P----~-i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~ 473 (579)
..|+||+|||++++....|.|. + .++.||.+||+.+.|.+|++.+|+.+|.+... +.. +|.+......
T Consensus 299 ~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~~ 371 (438)
T COG1541 299 MPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILTRNG 371 (438)
T ss_pred cceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEecCC
Confidence 4599999999999998777553 3 48999999999999999999999999987532 222 8988776533
Q ss_pred CCceEEEEEEeccC-CCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCc
Q 008068 474 DPGHYVIFWEVSGE-VNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPR 552 (579)
Q Consensus 474 ~~~~y~~~vE~~~~-~~~~~l~~~~~~ld~~L~n~~Y~~~R~~~~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr 552 (579)
......+-||...+ .......++...+...+ ..-...+++|.+|.+|+.++.. | |.+|
T Consensus 372 ~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~v~~v~~g~l~r~~------~------K~kr 430 (438)
T COG1541 372 GLDELTVRVELENEAEELEDERRLAKKLIKNI---------KSELGVRVEVELVEPGELPRTE------G------KAKR 430 (438)
T ss_pred CCceEEEEEEecCcccchHHHHHHHHHHHHHH---------HhhcCCceEEEEEeccceeccc------C------ceeE
Confidence 34567788888543 11122223333333332 3445688999999999977322 2 7788
Q ss_pred ccC
Q 008068 553 CVG 555 (579)
Q Consensus 553 ~~~ 555 (579)
++.
T Consensus 431 vvd 433 (438)
T COG1541 431 VVD 433 (438)
T ss_pred EEE
Confidence 875
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.5e-27 Score=258.73 Aligned_cols=390 Identities=14% Similarity=0.127 Sum_probs=224.9
Q ss_pred cHHHHHHHHHHHHHHH-cCCChhhHhc----CCC--CCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCcc--CCCcc
Q 008068 23 DAERIQRETLRKILEE-NASAEYLQNL----GLN--GRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILT--GKPIT 93 (579)
Q Consensus 23 ~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf~--~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll~--~~pi~ 93 (579)
+.++.|.+.|+++|+. .++++|||++ |++ .|++++||+ ++|+++++|++..-.-. .+.=.+++ .+.+.
T Consensus 13 ~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~~~~~i~ 89 (445)
T TIGR03335 13 ELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSADWKDIY 89 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccCCHHHeE
Confidence 4678999999999997 6899999995 774 799999998 69999999997653100 00001221 23355
Q ss_pred eeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeecccccccCCCCeEeccccccccCchhh
Q 008068 94 TISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173 (579)
Q Consensus 94 ~f~~TSGTT~G~~K~iP~t~~~l~~~~~~~~~~~~~l~~~~p~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~~~ 173 (579)
.+..||||| |+||.+++|...+......+...+ ....+..|..+...++. |.-.| +..+
T Consensus 90 ~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~~----~~~G~~~gD~vl~~~~~-------~~~~g---~~~~------ 148 (445)
T TIGR03335 90 TIHETSGTS-GTPKSFFLTWDDWKRYAEKYARSF----VSQGFTAGDRMVICASY-------GMNVG---ANTM------ 148 (445)
T ss_pred EEEeCCCCC-CCcceeeecHHHHHHHHHHHHHHH----HHcCCCCCCeEEEEecC-------Ccchh---HHHH------
Confidence 677899999 999999999877654322211111 11123334222211100 00000 0000
Q ss_pred hhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 008068 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253 (579)
Q Consensus 174 ~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI~~g~~~~~~~~ 253 (579)
.+..+.++ ..++.... . +..++.|++..+..
T Consensus 149 -------------------------~~~~~~~G------a~vi~~~~---~-----------~~~~~~i~~~~~t~---- 179 (445)
T TIGR03335 149 -------------------------TLAAREVG------MSIIPEGK---C-----------TFPIRIIESYRPTG---- 179 (445)
T ss_pred -------------------------HHHHHHcC------CEEEcCCc---h-----------hHHHHHHHHhCCCE----
Confidence 00000000 00111000 0 01122333323211
Q ss_pred hHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccC
Q 008068 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSS 330 (579)
Q Consensus 254 ~~~r~~l~~~l~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaS 330 (579)
+.+.++....+|+++++. |+-.. .++++ .+++|| ....++.+++.| |++++ +.||+|
T Consensus 180 ------l~~~ps~ll~La~~~~~~--------g~~~~-~~~lr---~ii~gGE~l~~~~r~~ie~~~-g~~v~-~~YG~T 239 (445)
T TIGR03335 180 ------IVASVFKLLRLARRMKAE--------GIDPA-ESSIR---RLVVGGESFADESRNYVEELW-GCEVY-NTYGST 239 (445)
T ss_pred ------EEECHHHHHHHHHHHHHc--------CCCcc-cCcce---EEEEcCCCCCHHHHHHHHHHh-CCcEE-ecCChh
Confidence 222222223344443321 22222 34688 666666 355677888888 59999 999999
Q ss_pred cccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEccc--------ccee
Q 008068 331 EGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--------AGLY 402 (579)
Q Consensus 331 Eg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~--------~Gl~ 402 (579)
|+.++. .|.. ..++|+..+..++|+++++ +.+ .|++|+.||||+|++ ..|+
T Consensus 240 E~~~~~----~c~~-~~g~h~~~d~~~vEIvDp~-----------~~~-----~vp~Ge~GELvvT~L~~~~~r~~~Pli 298 (445)
T TIGR03335 240 EGTMCG----ECQA-VAGLHVPEDLVHLDVYDPR-----------HQR-----FLPDGECGRIVLTTLLKPGERCGSLLI 298 (445)
T ss_pred hhhheE----EecC-CCCccccCCceEEEEEcCC-----------CCC-----CCcCCCceEEEEEecCCCCccCCceEE
Confidence 985442 3432 2478888888899999865 122 357899999999997 4499
Q ss_pred ccccCCEEEEe-ceeCCC----CEEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCC-CCCc
Q 008068 403 RYRLGDVVKVM-GFHNST----PELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLS-TDPG 476 (579)
Q Consensus 403 RYr~GDvv~v~-~~~~~~----P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~-~~~~ 476 (579)
||||||++++. ...|.| |++..+||.+||++++|.+|++.+|+++|.+.... .++ -.+|.+..+.. ....
T Consensus 299 RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~---~~~-~~~~~~~~~~~~~~~~ 374 (445)
T TIGR03335 299 NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENM---DSL-TGEYEAFLYGEEEGEI 374 (445)
T ss_pred EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCC---CCC-CccEEEEEecCCCCCc
Confidence 99999999974 355644 46777899999999999999999999999873100 011 12788776532 1123
Q ss_pred eEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh---hcCCcCCeEEEEeccchHHH
Q 008068 477 HYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR---KVNAIGPLELRVVLKGTFQQ 533 (579)
Q Consensus 477 ~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R---~~~~l~p~~v~~v~~gtf~~ 533 (579)
...+.+|...... ...+.+.+.+.+++ ...++..+ +.+ .-.++|.++++|++++
T Consensus 375 ~~~v~~e~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 375 TLRVSLECEDKDN-CSIHDIQENFTGTF-LKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred eEEEEEEecCccc-chHHHHHHHHHHHH-hhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 4556677743321 22333444444431 11122111 122 3457899999999864
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.94 E-value=6.5e-25 Score=237.76 Aligned_cols=381 Identities=16% Similarity=0.154 Sum_probs=219.6
Q ss_pred hcHHHHHHHHHHHHHHH-cCCChhhHhc----CC--CCCCChhhhhhcCCCcccccchHHHHH-HhcCCCCCCccCCCcc
Q 008068 22 KDAERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQR-IIDGDISPILTGKPIT 93 (579)
Q Consensus 22 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~i~s~edF~~~vPl~~Yed~~p~ier-~~~Ge~~~ll~~~pi~ 93 (579)
.+.++.|.+.|+++|+. .++++|||++ |+ +.|.|++||+ ++|++++++++..... +... ..+.+.
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~~------~~~~~~ 78 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFAV------PREQVV 78 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccCC------ChHHcE
Confidence 34678999999999998 6899999985 66 4789999998 6999999999865421 2211 122344
Q ss_pred eeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeecccccccCCCCeEeccccccccCchhh
Q 008068 94 TISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173 (579)
Q Consensus 94 ~f~~TSGTT~G~~K~iP~t~~~l~~~~~~~~~~~~~l~~~~p~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~~~ 173 (579)
++..||||| |+||.+++|+..+......... ....+.+..|..+...++ .|. ..+.
T Consensus 79 ~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~----~~~~~g~~~~d~~~~~~~-------~~~----~~~~-------- 134 (422)
T TIGR02155 79 RIHASSGTT-GKPTVVGYTQNDIDTWSSVVAR----SIRAAGGRPGDLIHNAYG-------YGL----FTGG-------- 134 (422)
T ss_pred EEEECCCCC-CCCeEeccCHHHHHHHHHHHHH----HHHHcCCCCCcEEEEccC-------ccc----cchh--------
Confidence 666899999 9999999998766433222111 011112223322211110 000 0000
Q ss_pred hhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 008068 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253 (579)
Q Consensus 174 ~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI~~g~~~~~~~~ 253 (579)
+.. .|..+.++ ...+... ...-+.+++.|++.++.-
T Consensus 135 -~~~---------------------~~~~~~~g------~~~~~~~------------~~~~~~~~~~i~~~~~t~---- 170 (422)
T TIGR02155 135 -LGA---------------------HYGAEKLG------CTVVPIS------------GGQTEKQVQLIQDFKPDI---- 170 (422)
T ss_pred -HHH---------------------HHHHHHcC------cEEEecC------------CCCHHHHHHHHHHHCCCE----
Confidence 000 00000000 0011000 001133445555555532
Q ss_pred hHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccC
Q 008068 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSS 330 (579)
Q Consensus 254 ~~~r~~l~~~l~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaS 330 (579)
+.+.++-...+|+++.+. ++-.+ .++++ .+++|| ....++.+++.| |++++ +.||+|
T Consensus 171 ------l~~~Ps~l~~L~~~~~~~--------~~~~~-~~~lr---~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG~t 230 (422)
T TIGR02155 171 ------IMVTPSYMLNLLEELKRM--------GIDPA-QTSLQ---VGIFGAEPWTNAMRKEIEARL-GMKAT-DIYGLS 230 (422)
T ss_pred ------EEEcHHHHHHHHHHHHHc--------CCCcc-cCceE---EEEEeCCcCCHHHHHHHHHHh-CCceE-ecccch
Confidence 233322223344433221 22111 13577 555555 366777888888 58999 999999
Q ss_pred ccc-ceecCCCCCCcccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcccc----ceeccc
Q 008068 331 EGW-IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA----GLYRYR 405 (579)
Q Consensus 331 Eg~-i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~~----Gl~RYr 405 (579)
|+. .++. ..|.....++++..+..+.|+++++ ++. +|.+|+.||||+|+.. .+.||+
T Consensus 231 E~~~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~-----------~g~-----~v~~Ge~Gelvvt~~~~~~~p~~ry~ 292 (422)
T TIGR02155 231 EVIGPGVA--MECVETQDGLHIWEDHFYPEIIDPH-----------TGE-----VLPDGEEGELVFTTLTKEALPVIRYR 292 (422)
T ss_pred hhcCCcee--ecccccCCCceEecCeeEEEEECCC-----------CCC-----CCCCCCeeEEEEecCCccccceeeEE
Confidence 963 2222 1232112467776667788998754 123 4568999999999852 377999
Q ss_pred cCCEEEEeceeC--CCC-EEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEE
Q 008068 406 LGDVVKVMGFHN--STP-ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW 482 (579)
Q Consensus 406 ~GDvv~v~~~~~--~~P-~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~v 482 (579)
|||+++++. .| ..| .+.|+||.+|++++.|++|++.+|+.++.+. .++. ..|.+..+....+-..++.+
T Consensus 293 TGDl~~~~~-~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~------~~v~-~~~q~~~~~~~~~~~~~~~v 364 (422)
T TIGR02155 293 TRDLTRLLP-GTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKM------DELS-PHYQLELTRNGHMDELTLKV 364 (422)
T ss_pred cCcEEEEEC-CCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhC------cCcC-CCEEEEEEcCCCccEEEEEE
Confidence 999999875 22 223 3489999999999999999999999999753 2321 15666555322222566778
Q ss_pred EeccCC----CHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEeccchHH
Q 008068 483 EVSGEV----NDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQ 532 (579)
Q Consensus 483 E~~~~~----~~~~l~~~~~~ld~~L~n~~Y~~~R~~~~l~p~~v~~v~~gtf~ 532 (579)
|...+. ..+..+.+.+.+.+.+ +...-..++|.++.+|++.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~v~~~~~~~lp 409 (422)
T TIGR02155 365 ELKPESYTLRLHEQASLLAGEIQHTI---------KQEVGVSMDVHLVEPGSLP 409 (422)
T ss_pred EEecCcccccchHHHHHHHHHHHHHH---------HhccCcEEEEEEECCCCcc
Confidence 875331 1122233344444443 2222233679999999986
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.90 E-value=4.6e-22 Score=215.02 Aligned_cols=316 Identities=13% Similarity=0.155 Sum_probs=204.8
Q ss_pred cHHHHHHHHHHHHHHH-cCCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCC--CCCC------------c
Q 008068 23 DAERIQRETLRKILEE-NASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD--ISPI------------L 87 (579)
Q Consensus 23 ~~~~~Q~~~L~~iL~~-~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge--~~~l------------l 87 (579)
..++.|++.|+++|+. .++++|||++. .+ +++ ++|+++++++....+++.... .+.. .
T Consensus 23 ~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r~f 95 (430)
T TIGR02304 23 ALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTRDF 95 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhccc
Confidence 4678999999999998 69999999973 33 576 799999999999999998421 0100 0
Q ss_pred c--CCCcceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC--CCCC-ceEEEeecccccccCCCCeEecc
Q 008068 88 T--GKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP--IGKG-KALQFIYGSKQSKTKGGLNAGTA 162 (579)
Q Consensus 88 ~--~~pi~~f~~TSGTT~G~~K~iP~t~~~l~~~~~~~~~~~~~l~~~~p--~~~g-k~l~~~~~~~~~~t~~Gi~~g~~ 162 (579)
. .+++ ....||||| |+|-.|.++++...... + ..+.+..| +..| |...+.++..
T Consensus 96 ~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~~-a-----~~~~~~~~~g~~~g~r~a~~~~~~~------------- 154 (430)
T TIGR02304 96 KPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMWA-G-----GILAKVLPDGLFAKHRIAFFLRADN------------- 154 (430)
T ss_pred ccccCcE-EEEECCCCC-CCceEEEECHHHHHHHH-H-----HHHhhhCccccccCCcEEEEEccCh-------------
Confidence 0 0233 556799999 99999999987553211 1 11222222 2333 4444333321
Q ss_pred ccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHH
Q 008068 163 TTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 242 (579)
Q Consensus 163 S~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~y~~Ll~al~~~~~l~~i~~~f~~~ll~~~~~l~~~~~~l~~dI 242 (579)
..+ . . +. .. ++ + +..|++. +.+++.++.|
T Consensus 155 -~ly-~------~---~~----~~----------------~~---------~----------~~~~~l~-~~~~~~l~~L 183 (430)
T TIGR02304 155 -NLY-Q------S---VN----NR----------------WI---------S----------LDFFDLL-APFQAHIKRL 183 (430)
T ss_pred -hHH-H------H---HH----hc----------------cc---------e----------eeecCCC-cCHHHHHHHH
Confidence 000 0 0 00 00 00 0 1122334 5678888888
Q ss_pred HhcccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCC
Q 008068 243 REGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGD 319 (579)
Q Consensus 243 ~~g~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~ 319 (579)
.+-.+. .|.++++....+|+++++. ++ ++ +++ .+.++| .+..++.+++.| |
T Consensus 184 ~~~~P~----------~L~g~pS~l~~LA~~~~~~--------~l--~~--~~k---~ii~~~E~l~~~~r~~Ie~~f-g 237 (430)
T TIGR02304 184 NQRKPS----------IIVAPPSVLRALALEVMEG--------EL--TI--KPK---KVISVAEVLEPQDRELIRNVF-K 237 (430)
T ss_pred HHhCCC----------EEEEcHHHHHHHHHHHHhc--------CC--CC--Cce---EEEEccCCCCHHHHHHHHHHh-C
Confidence 877763 3666666666677665431 23 22 356 444444 466777899999 5
Q ss_pred CCeeccccccCcccceecCCCCCCcccccceecCCceEEEE--EeCCCCCcccccccCCCccccccccCCCceEEEEEcc
Q 008068 320 LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF--IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 397 (579)
Q Consensus 320 v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Ef--ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt 397 (579)
++++ +.||+|||+++ .+|+. ++||+..+..++|+ ++++ | .++.|||+
T Consensus 238 ~~V~-~~YG~tEg~la----~eC~~--g~lHl~ed~~~vE~~ivD~~-----------------------~-~~~~ViT~ 286 (430)
T TIGR02304 238 NTVH-QIYQATEGFLA----STCRC--GTLHLNEDLVHIEKQYLDEH-----------------------K-RFVPIITD 286 (430)
T ss_pred CCee-EccCCchhheE----EecCC--CCEEEccccEEEEeeEECCC-----------------------C-ceEEEEec
Confidence 9999 89999997666 34643 46999999999994 5432 1 13459999
Q ss_pred c----cceeccccCCEEEEeceeCCC----CEE-EEEeeeCceEee---ceee--cCHHHHHHHHHHHHHHhhhcCCeeE
Q 008068 398 V----AGLYRYRLGDVVKVMGFHNST----PEL-KFICRRNLLLTI---NIDK--NTEKDLQLSVDEAAQLLAEEKQEVV 463 (579)
Q Consensus 398 ~----~Gl~RYr~GDvv~v~~~~~~~----P~i-~f~gR~~d~i~~---~Gek--v~e~~v~~av~~~~~~l~~~g~~l~ 463 (579)
+ .+|+||+|||++++....|.| |+| .+.||.+|++.+ +|.. |++..+..++....+ + +.
T Consensus 287 L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~-----~--i~ 359 (430)
T TIGR02304 287 FTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLP-----L--IV 359 (430)
T ss_pred CCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCC-----C--Cc
Confidence 6 459999999999988877755 356 589999999876 4544 588888887664322 2 46
Q ss_pred eeEEeecCCCCCceEEEEEEe
Q 008068 464 DFTSHVDLSTDPGHYVIFWEV 484 (579)
Q Consensus 464 ~f~~~~~~~~~~~~y~~~vE~ 484 (579)
+|.++.. ...+.++.++.
T Consensus 360 ~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 360 EYRVLQT---GSAQLELIADC 377 (430)
T ss_pred eEEEEEc---cCCeEEEEEEe
Confidence 8988765 35677776654
No 9
>PRK07529 AMP-binding domain protein; Validated
Probab=99.55 E-value=4.8e-13 Score=152.55 Aligned_cols=137 Identities=12% Similarity=0.148 Sum_probs=95.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++++ .+.+||. ....+++++.+ +++++ +.||+||+.+.....+.. ..+..|..+ | +.-+.++..+
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~~-p-~~~v~i~~~d- 403 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLRL-P-YQRVRVVILD- 403 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCccccc-C-CceEEEEEcC-
Confidence 46788 6677763 55666777777 68999 999999985543322211 122234432 2 2334555444
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. +. ...++.+|+.|||+|++ +.||+ +|+|||+++++. .+.+.|+||.+
T Consensus 404 -~~--------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~ 468 (632)
T PRK07529 404 -DA--------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAK 468 (632)
T ss_pred -CC--------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEeccc
Confidence 21 11 01256789999999976 35543 699999999985 68999999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+|+++|++|++.+||+++.+.
T Consensus 469 d~i~~~G~~i~p~eIE~~l~~~ 490 (632)
T PRK07529 469 DLIIRGGHNIDPAAIEEALLRH 490 (632)
T ss_pred CEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 10
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.55 E-value=3.9e-13 Score=150.38 Aligned_cols=134 Identities=16% Similarity=0.183 Sum_probs=92.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.++|+ .+.+||. ....+++++.+++++++ +.||+||+...+...... ..+..|..+ ++. -+..++.+
T Consensus 298 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~-~g~-~v~i~d~~- 370 (539)
T PRK06334 298 LPSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGMPI-RGM-DVLIVSEE- 370 (539)
T ss_pred ccccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCceec-CCC-EEEEEcCC-
Confidence 46788 6677773 55666777778778999 999999975332221111 111123322 221 12223221
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee---------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
++. ++.+|+.|||+|++ +.||| +|+|||+++++. .+.+.|+||
T Consensus 371 ----------~~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~GR 431 (539)
T PRK06334 371 ----------TKV-----PVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLKGR 431 (539)
T ss_pred ----------CCc-----cCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEEec
Confidence 122 46789999999966 34554 699999999985 678999999
Q ss_pred eCceEeeceeecCHHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+|+|+++|++|++.|||++|.+.
T Consensus 432 ~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 432 LSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred cCCeEEECCEEECHHHHHHHHHHc
Confidence 999999999999999999999864
No 11
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.53 E-value=5.7e-12 Score=143.27 Aligned_cols=228 Identities=13% Similarity=0.091 Sum_probs=130.4
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhC--CCCeeccccccCcccce-ecCCC---CCCcccccceecCCceEEEEEe
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAG--DLPLMSADYGSSEGWIG-ANVNP---SLPPELATFAVLPNIGYFEFIP 362 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g--~v~v~~~~YgaSEg~i~-~~~~~---~~~~~~~~~~l~~~~~~~Efip 362 (579)
.++|+ .+.+||. ....+.+.+.++ +++++ +.||+||+... +...+ ...++..|..+ + +.-++.++
T Consensus 357 l~~lr---~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~-~-g~~~~i~d 430 (625)
T TIGR02188 357 LSSLR---LLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATLPF-F-GIEPAVVD 430 (625)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccCCc-C-CceEEEEC
Confidence 35678 6666663 444455666665 38899 99999997432 21111 11122233322 2 33344444
Q ss_pred CCCCCcccccccCCCccccccccC-CCceEEEEEccc-----ccee----------------ccccCCEEEEeceeCCCC
Q 008068 363 QRLGNLESQVLCIEPKPVGLTEVK-VGEEYEIIVTNV-----AGLY----------------RYRLGDVVKVMGFHNSTP 420 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~eve-~G~~yeLVvTt~-----~Gl~----------------RYr~GDvv~v~~~~~~~P 420 (579)
.+ +. +++ +|+.|||+|++. .||| +|+|||+++++. ..
T Consensus 431 ~~------------g~-----~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG 489 (625)
T TIGR02188 431 EE------------GN-----PVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DG 489 (625)
T ss_pred CC------------CC-----CCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CC
Confidence 22 22 345 799999999862 3444 399999999985 67
Q ss_pred EEEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccCC--CHHHHHHHH
Q 008068 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEV--NDEVLKECC 497 (579)
Q Consensus 421 ~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE~~~~~--~~~~l~~~~ 497 (579)
.+.|+||.+|+|+++|++|++.+||++|.+. .+ |.+..++.. .......-+.||.+..+. +.+..+++.
T Consensus 490 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~------p~--V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~ 561 (625)
T TIGR02188 490 YIWITGRVDDVINVSGHRLGTAEIESALVSH------PA--VAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELR 561 (625)
T ss_pred cEEEEecccCEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHH
Confidence 8999999999999999999999999999853 22 334444321 111112334667664432 222233444
Q ss_pred HHHHHhccChhhHHHhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 008068 498 NCLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (579)
Q Consensus 498 ~~ld~~L~n~~Y~~~R~~~~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (579)
+.+.+.| . . ...|-.|.+|+ .|-..+-.=..+..|.. .+++.+.-+. |++.++.+++
T Consensus 562 ~~~~~~l-~-~--------~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~--~p~~~~~~~~ 624 (625)
T TIGR02188 562 KHVRKEI-G-P--------IAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLE--DPSVVEELIE 624 (625)
T ss_pred HHHHhhc-C-C--------CccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCccccc--CHHHHHHHHh
Confidence 4444443 1 1 23344445542 34433322122223421 2355667777 8999888875
No 12
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.53 E-value=2.9e-14 Score=147.25 Aligned_cols=132 Identities=19% Similarity=0.230 Sum_probs=98.9
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCc----ccccceecCCceEEEEEeCCC
Q 008068 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP----ELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 293 P~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~----~~~~~~l~~~~~~~Efip~~~ 365 (579)
.+|+++ -.|| .+..++++...+ |+.+. ..+|+.||.+.+.--. +|+ ...|..+.|+. |..-++
T Consensus 305 sSLrll---QVGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyTRLD-Dp~E~i~~TQGrPlsP~D---EvrvvD- 374 (542)
T COG1021 305 SSLRLL---QVGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYTRLD-DPPEIIIHTQGRPLSPDD---EVRVVD- 374 (542)
T ss_pred hheeEE---eecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhcccccC-CchHheeecCCCcCCCcc---eeEEec-
Confidence 367844 4455 366777888888 69999 9999999987654211 122 22345444433 444444
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEc---cccceec--------------cccCCEEEEeceeCCCCEEEEEeee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVT---NVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvT---t~~Gl~R--------------Yr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+ +++ +|.+||+|+|.+. |+.|||| ||+||+|+.+. .+.+.+.||.
T Consensus 375 -~--------dg~-----pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~----dGyl~V~GR~ 436 (542)
T COG1021 375 -A--------DGN-----PVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDP----DGYLVVEGRV 436 (542)
T ss_pred -C--------CCC-----CCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecC----CceEEEEeee
Confidence 2 233 6789999999994 5799997 99999999995 7899999999
Q ss_pred CceEeeceeecCHHHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEAA 452 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~~ 452 (579)
+|.||.+||||..+|||+.+....
T Consensus 437 KDQINRgGEKIAAeEvEn~LL~HP 460 (542)
T COG1021 437 KDQINRGGEKIAAEEVENLLLRHP 460 (542)
T ss_pred hhhhccccchhhHHHHHHHHhhCc
Confidence 999999999999999999988653
No 13
>PRK09274 peptide synthase; Provisional
Probab=99.53 E-value=2.1e-12 Score=144.24 Aligned_cols=142 Identities=13% Similarity=0.124 Sum_probs=93.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceecCCCC-----------C-CcccccceecCCc
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPS-----------L-PPELATFAVLPNI 355 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g-~v~v~~~~YgaSEg~i~~~~~~~-----------~-~~~~~~~~l~~~~ 355 (579)
.|+++ .+.+||. ...++++++.++ +++++ +.||+||+......... . +....|.. .+ +
T Consensus 287 ~~~lr---~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~-~~-~ 360 (552)
T PRK09274 287 LPSLR---RVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGRP-VD-G 360 (552)
T ss_pred Cchhh---EEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCcc-CC-C
Confidence 46788 6677763 566677888886 47898 99999997532211110 0 00012222 22 2
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---ccce------------------eccccCCEEEEec
Q 008068 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGL------------------YRYRLGDVVKVMG 414 (579)
Q Consensus 356 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl------------------~RYr~GDvv~v~~ 414 (579)
.-+.+++.+ +.. .+..-...++..|+.|||+|++ ..|| .||+|||+++++.
T Consensus 361 ~~~~ivd~~--~~~------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~ 432 (552)
T PRK09274 361 VEVRIIAIS--DAP------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA 432 (552)
T ss_pred ceEEEEecc--ccc------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc
Confidence 334555543 100 0000011256789999999965 2333 3899999999985
Q ss_pred eeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 415 FHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 415 ~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.+.|+||.+|+|+++|++|++.+||+++.+.
T Consensus 433 ----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 433 ----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred ----CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 678999999999999999999999999999864
No 14
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.52 E-value=7.6e-12 Score=142.66 Aligned_cols=228 Identities=13% Similarity=0.108 Sum_probs=130.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCC--CCeeccccccCcccceecC-CC---CCCcccccceecCCceEEEEEe
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGD--LPLMSADYGSSEGWIGANV-NP---SLPPELATFAVLPNIGYFEFIP 362 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~--v~v~~~~YgaSEg~i~~~~-~~---~~~~~~~~~~l~~~~~~~Efip 362 (579)
.++|+ .+.+||. ....+.+.+.+++ ++++ +.||+||+...+.. .+ .+.++..|..+ .+.-+++++
T Consensus 366 ~~~lr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~--~g~~~~i~d 439 (637)
T PRK00174 366 LSSLR---LLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATRPL--PGIQPAVVD 439 (637)
T ss_pred cccee---EEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccCCC--CCceEEEEC
Confidence 46788 5666663 4444556666653 8899 99999997432211 11 11122233322 233445544
Q ss_pred CCCCCcccccccCCCccccccccCCCceEEEEEccc-----ccee----------------ccccCCEEEEeceeCCCCE
Q 008068 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY----------------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~----------------RYr~GDvv~v~~~~~~~P~ 421 (579)
.+ ++ +++.|+.|||+|+.. .||| +|+|||+++++. .+.
T Consensus 440 ~~------------g~-----~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~ 498 (637)
T PRK00174 440 EE------------GN-----PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE----DGY 498 (637)
T ss_pred CC------------CC-----CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC----CCc
Confidence 32 23 356799999999851 2332 499999999984 689
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccCC--CHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEV--NDEVLKECCN 498 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE~~~~~--~~~~l~~~~~ 498 (579)
+.|+||.+|+|+++|++|++.+||++|.+. .+ +.+..++.. .......-+.|+++..+. +.+..+++.+
T Consensus 499 l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~ 570 (637)
T PRK00174 499 YWITGRVDDVLNVSGHRLGTAEIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRN 570 (637)
T ss_pred EEEEEecccEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999753 23 234444321 111112234566664332 2222334444
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEe------ccchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhcc
Q 008068 499 CLDRSFVDAGYVSARKVNAIGPLELRVV------LKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNN 568 (579)
Q Consensus 499 ~ld~~L~n~~Y~~~R~~~~l~p~~v~~v------~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~ 568 (579)
.+.+.| +. ...|-.+.+| ..|-..+-.=..+.+|.. +.+-+.-+. |++.++.+++.
T Consensus 571 ~l~~~l--~~--------~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~ 632 (637)
T PRK00174 571 WVRKEI--GP--------IAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLA--DPSVVEKLIEA 632 (637)
T ss_pred HHHhhc--CC--------ccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCccccc--CHHHHHHHHHH
Confidence 444443 11 2345555555 234443321111223332 455566677 88888887754
No 15
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.50 E-value=2.9e-12 Score=143.22 Aligned_cols=132 Identities=16% Similarity=0.038 Sum_probs=91.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.++|+ .+..||. ....+++++.+ +++++ +.||+||+.+.....+. ..++..|.. .+ +.-+++++.+
T Consensus 322 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~~-~~-~~~~~i~d~~- 393 (549)
T PRK07788 322 TSSLK---IIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVGRP-PK-GVTVKILDEN- 393 (549)
T ss_pred CCcee---EEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCcccC-CC-CcEEEEECCC-
Confidence 46788 6666663 55666777778 47888 99999997432211111 111122332 22 2345555432
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc---ccee----------ccccCCEEEEeceeCCCCEEEEEeeeCceE
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 432 (579)
++ +++.|+.|||+|++. .||+ +|+|||+++.+. ...+.|+||.+|++
T Consensus 394 -----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i 453 (549)
T PRK07788 394 -----------GN-----EVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMI 453 (549)
T ss_pred -----------cC-----CCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceE
Confidence 22 456799999999873 5565 589999999885 67899999999999
Q ss_pred eeceeecCHHHHHHHHHHH
Q 008068 433 TINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 433 ~~~Gekv~e~~v~~av~~~ 451 (579)
+++|++|++.+||+++.+.
T Consensus 454 ~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 454 VSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 16
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.49 E-value=7.6e-12 Score=140.44 Aligned_cols=133 Identities=13% Similarity=0.119 Sum_probs=93.7
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceec--CCCCC--CcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGAN--VNPSL--PPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~--~~~~~--~~~~~~~~l~~~~~~~Efip~~ 364 (579)
++.++ .+.+||. ...++++.+.+++++++ +.||+||+..... ..... ..+..|. ...+.-.+.++++
T Consensus 318 ~~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~--~~~~~~v~i~d~~ 391 (560)
T PLN02574 318 LKSLK---QVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGL--LAPNMQAKVVDWS 391 (560)
T ss_pred cccce---EEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceee--eCCCcEEEEEeCC
Confidence 45677 5666663 45566677777778999 9999999753221 11111 1112232 2234456666643
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
++. ++..|+.|||+|++ ..||| +|+|||+++++. ...+.|+||
T Consensus 392 -----------~g~-----~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR 451 (560)
T PLN02574 392 -----------TGC-----LLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDR 451 (560)
T ss_pred -----------CCc-----CCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEec
Confidence 123 45789999999976 35554 599999999985 688999999
Q ss_pred eCceEeeceeecCHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
.+|+++++|++|++.+||+++.+
T Consensus 452 ~~d~i~~~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 452 LKEIIKYKGFQIAPADLEAVLIS 474 (560)
T ss_pred chhheEECCEEECHHHHHHHHHh
Confidence 99999999999999999999875
No 17
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.49 E-value=6.8e-12 Score=143.63 Aligned_cols=132 Identities=17% Similarity=0.139 Sum_probs=91.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.++|+ .+.+||. ....+.+++.+ ++++. +.||+||+...+..... .+.+..|..+ .+.-.+.++.+
T Consensus 379 l~~Lr---~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~--~g~~~~i~d~~- 450 (647)
T PTZ00237 379 LSNLK---EIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGVPS--IFIKPSILSED- 450 (647)
T ss_pred cchhe---EEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCccCc--CCceEEEECCC-
Confidence 35788 6667763 44555666777 58999 99999997532211111 1112233321 22234444432
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc------cccee---------------ccccCCEEEEeceeCCCCEEEE
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN------VAGLY---------------RYRLGDVVKVMGFHNSTPELKF 424 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt------~~Gl~---------------RYr~GDvv~v~~~~~~~P~i~f 424 (579)
+. +++.|+.|||+++. ..||| +|+|||+++++. ...+.|
T Consensus 451 -----------g~-----~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~l~i 510 (647)
T PTZ00237 451 -----------GK-----ELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGYYTI 510 (647)
T ss_pred -----------CC-----CCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCeEEE
Confidence 23 45679999999974 35666 499999999985 689999
Q ss_pred EeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 425 ICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 425 ~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+||.+|+|+++|++|++.+||++|.+.
T Consensus 511 ~GR~dd~i~~~G~rI~p~eIE~~l~~~ 537 (647)
T PTZ00237 511 VSRSDDQIKISGNKVQLNTIETSILKH 537 (647)
T ss_pred EeccCCEEEECCEEeCHHHHHHHHHhC
Confidence 999999999999999999999999854
No 18
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.48 E-value=1.1e-11 Score=138.67 Aligned_cols=132 Identities=8% Similarity=0.109 Sum_probs=91.7
Q ss_pred cCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC----cccccceecCCceEEEEEeC
Q 008068 291 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP----PELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 291 lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~----~~~~~~~l~~~~~~~Efip~ 363 (579)
-.++++ .+.+|| .....+++++.+ +++++ +.||+||+.......+..+ ....|..+ + +.-+++++.
T Consensus 310 ~~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~v~i~d~ 382 (547)
T PRK13295 310 PVSSLR---TFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGCPL-P-GVEVRVVDA 382 (547)
T ss_pred Ccccce---EEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCcccccc-C-CcEEEEECC
Confidence 356788 666666 366667777778 68999 9999999743222111110 01122221 2 233454443
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEcc---cccee------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+ +. ++..|+.|||+|++ +.||| +|+|||+++++. .+.+.|+||.
T Consensus 383 ~------------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR~ 441 (547)
T PRK13295 383 D------------GA-----PLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGRS 441 (547)
T ss_pred C------------CC-----CCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEecc
Confidence 2 12 45679999999977 35665 499999999985 6789999999
Q ss_pred CceEeeceeecCHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+|+++++|++|++.+||++|.+
T Consensus 442 ~~~i~~~G~~v~p~~IE~~l~~ 463 (547)
T PRK13295 442 KDVIIRGGENIPVVEIEALLYR 463 (547)
T ss_pred CCeEEECCEEECHHHHHHHHHh
Confidence 9999999999999999999875
No 19
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.48 E-value=1.2e-11 Score=139.14 Aligned_cols=132 Identities=11% Similarity=0.081 Sum_probs=92.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCC--CCCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNP--SLPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++++ .+.+||. ....+.+++.+ +++++ +.||+||... .+...+ ...++..|..+ .+..+++++.+
T Consensus 322 ~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~--~g~~~~i~d~~- 393 (570)
T PRK04319 322 LSSLR---HILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGKPL--PGIEAAIVDDQ- 393 (570)
T ss_pred cccce---EEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcCCC--CCCEEEEECCC-
Confidence 56788 6666663 44556666767 58998 9999999743 221111 11122234322 23345555543
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc-----cccee-------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN-----VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt-----~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
+. ++++|+.|||+|++ +.||| +|+|||+++++. ...+.|+||
T Consensus 394 -----------~~-----~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~GR 453 (570)
T PRK04319 394 -----------GN-----ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQGR 453 (570)
T ss_pred -----------CC-----CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEEec
Confidence 12 34789999999974 24666 699999999985 678999999
Q ss_pred eCceEeeceeecCHHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+|+++++|++|++.+||+++.+.
T Consensus 454 ~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 454 VDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred CCCEEEECCEEECHHHHHHHHhhC
Confidence 999999999999999999999764
No 20
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.48 E-value=2.1e-11 Score=136.84 Aligned_cols=131 Identities=18% Similarity=0.256 Sum_probs=92.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCcccccceecCCceEEEEEeCCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
.++++ +++.||. ....+.+++.+ +++++ +.||+||+...+...+. ..++..|..+ .+..++.++++
T Consensus 325 ~~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~~--~~~~v~i~d~~-- 395 (562)
T PRK05677 325 FSALK---LTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGIPV--PSTLCKVIDDD-- 395 (562)
T ss_pred hhhce---EEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCccC--CCCEEEEECCC--
Confidence 45788 6677773 55556667767 58999 99999997533322221 1122234322 33455555432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. ++..|+.|||+|++ ..||| +|+|||+++++. .+.+.|.||.+
T Consensus 396 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~ 456 (562)
T PRK05677 396 ----------GN-----ELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKK 456 (562)
T ss_pred ----------CC-----CCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCc
Confidence 12 45679999999976 35555 599999999996 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~ 450 (579)
|++++.|++|++.+||+++.+
T Consensus 457 d~i~~~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 457 DMILVSGFNVYPNELEDVLAA 477 (562)
T ss_pred CeEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 21
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.47 E-value=2e-11 Score=134.43 Aligned_cols=133 Identities=17% Similarity=0.262 Sum_probs=88.9
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-------CCCcccccceecCCceEEEE
Q 008068 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEF 360 (579)
Q Consensus 291 lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~-------~~~~~~~~~~l~~~~~~~Ef 360 (579)
-+|+++ .+..||. ....+++.+.+++++++ ..||+||+...+.... .++....+.. .++ .-...
T Consensus 256 ~~~~l~---~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~-~~~-~~~~i 329 (502)
T TIGR01734 256 NYPHLT---HFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGFA-KPD-MNLFI 329 (502)
T ss_pred cCCccc---EEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCccccccc-cCC-CEEEE
Confidence 356777 5555552 55566677778788999 9999999643322110 0111112221 111 22222
Q ss_pred EeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee-----------------ccccCCEEEEeceeCCCC
Q 008068 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFHNSTP 420 (579)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------RYr~GDvv~v~~~~~~~P 420 (579)
++.+ +. .+.+|+.|||+|++ ..||| +|+|||+++++. .
T Consensus 330 ~~~~------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~- 387 (502)
T TIGR01734 330 MDEE------------GE-----PLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G- 387 (502)
T ss_pred ECCC------------CC-----CCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-
Confidence 2221 12 35679999999976 34444 699999999985 4
Q ss_pred EEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 421 ~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.++||.+|+++++|++|++.+||+++.+.
T Consensus 388 ~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 388 QLFYQGRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred EEEEeccccCeEEECcEEeCHHHHHHHHHcC
Confidence 9999999999999999999999999999864
No 22
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.46 E-value=5e-11 Score=135.84 Aligned_cols=133 Identities=9% Similarity=0.033 Sum_probs=89.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC-----CCcccccceecCCceEEEEEe
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIP 362 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~-~~~~~-----~~~~~~~~~l~~~~~~~Efip 362 (579)
.++|+ .+.+||. ....+.+++.+ +++++ +.||+||....+ ...+. ...+..|..+ + +.-+.+++
T Consensus 353 l~~lr---~~~~gGe~l~~~~~~~~~~~~-~~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~-~-g~~v~i~d 425 (628)
T TIGR02316 353 LSSLH---WLFLAGEPLDEPTAHWITDGL-GKPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPM-Y-GYHLRVLD 425 (628)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHh-CCCEE-ecccccccCceeecCCCCCCcCCCCCCCcccCc-C-CceEEEEE
Confidence 46788 6666663 44455566667 57888 999999975322 11111 1112223322 2 22334444
Q ss_pred CCCCCcccccccCCCccccccccCCCceEEEEEccc------ccee-----------------ccccCCEEEEeceeCCC
Q 008068 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNST 419 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~-----------------RYr~GDvv~v~~~~~~~ 419 (579)
.+ +++ ++..|+.|||+|+.. .|+| +|+|||+++.+. .
T Consensus 426 ~~-----------~g~-----~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----d 485 (628)
T TIGR02316 426 EA-----------TGR-----PCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----D 485 (628)
T ss_pred CC-----------CCC-----CCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----C
Confidence 32 123 456799999999763 3333 599999999985 6
Q ss_pred CEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 420 PELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 420 P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
..+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 486 G~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~ 517 (628)
T TIGR02316 486 GYTFILGRTDDVINVAGHRLGTREIEESVSSH 517 (628)
T ss_pred CcEEEEEcCcceEEeCCEEeCHHHHHHHHHhC
Confidence 78999999999999999999999999999753
No 23
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=5.3e-12 Score=141.30 Aligned_cols=131 Identities=19% Similarity=0.217 Sum_probs=91.5
Q ss_pred CCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC---CcccccceecCCceEEEEEeCCCC
Q 008068 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 294 ~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
+|+ ++++||. +...+++++.|+..++. .+||+||+.. .+...+.. ..+..|.. .| +.-+..++.+
T Consensus 292 ~lr---~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~p-g~~v~Ivd~~-- 363 (534)
T COG0318 292 SLR---LVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGRP-LP-GVEVRIVDPD-- 363 (534)
T ss_pred ceE---EEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCccccc-CC-CcEEEEEeCC--
Confidence 478 8888884 66777788888656788 9999999854 32221221 12222332 22 1223333332
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+ .. +.+|+.|||+|.. +.||| ||+|||+++++. .+.+.|+||.+
T Consensus 364 --~-------~~------~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~gR~k 424 (534)
T COG0318 364 --G-------GE------VLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVGRLK 424 (534)
T ss_pred --C-------Cc------cCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEeccc
Confidence 1 11 2238899999954 46766 599999998886 58999999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+|+.+||||++.+||.++.+.
T Consensus 425 d~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 425 DLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999875
No 24
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.46 E-value=2.1e-11 Score=136.45 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=90.9
Q ss_pred CCCceeeEEeecCh-HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCCCcccccceecCCceEEEEEeCCCCCccc
Q 008068 293 PNAKYLSGIMTGSM-EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSLPPELATFAVLPNIGYFEFIPQRLGNLES 370 (579)
Q Consensus 293 P~l~~i~~~~~g~~-~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~ 370 (579)
++++ .+.+|+. ...++.+++.+ +++++ +.||+||+...+... +...++..+.. ..+.-+++++.+
T Consensus 294 ~~l~---~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~~--~~~~~~~i~d~~------ 360 (542)
T PRK06155 294 HRVR---VALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGRL--APGFEARVVDEH------ 360 (542)
T ss_pred CceE---EEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCcc--CCCceEEEECCC------
Confidence 4566 4445653 45556677777 58999 999999974433211 11122222322 233445555432
Q ss_pred ccccCCCccccccccCCCceEEEEEccc------ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCce
Q 008068 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 431 (579)
Q Consensus 371 ~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 431 (579)
+. ++..|+.|||+|++. .||| ||+|||+++++. .+.+.|+||.+|+
T Consensus 361 ------~~-----~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~~d~ 425 (542)
T PRK06155 361 ------DQ-----ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRIKDA 425 (542)
T ss_pred ------CC-----CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecCCCE
Confidence 22 456799999999864 4444 799999999975 6789999999999
Q ss_pred EeeceeecCHHHHHHHHHHH
Q 008068 432 LTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 432 i~~~Gekv~e~~v~~av~~~ 451 (579)
++++|++|++.+||++|.+.
T Consensus 426 i~~~G~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 426 IRRRGENISSFEVEQVLLSH 445 (542)
T ss_pred EEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999763
No 25
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.46 E-value=1.9e-11 Score=141.07 Aligned_cols=133 Identities=15% Similarity=0.157 Sum_probs=93.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCcccccceecCCceEEEEEeCCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
+++++ ++.+||. ....+++.+.+++++++ +.||+||+........ ....+..|.. .+ +..++.++.+
T Consensus 259 ~~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~p-~~-~~~v~i~d~~-- 330 (705)
T PRK06060 259 FRSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGRV-LP-PYEIRVVAPD-- 330 (705)
T ss_pred cccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCccccc-CC-CcEEEEECCC--
Confidence 45788 6677763 55666777888778999 9999999753322111 1111112332 22 2345555432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee-----------ccccCCEEEEeceeCCCCEEEEEeeeCceE
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 432 (579)
+. ++.+|+.|||+|++ ..||| +|+|||+++.+. .+.+.|+||.+|++
T Consensus 331 ----------g~-----~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~i 391 (705)
T PRK06060 331 ----------GT-----TAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTE 391 (705)
T ss_pred ----------CC-----CCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceE
Confidence 12 35679999999976 35555 499999999875 67899999999999
Q ss_pred eeceeecCHHHHHHHHHHH
Q 008068 433 TINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 433 ~~~Gekv~e~~v~~av~~~ 451 (579)
+++|++|.+.+||++|.+.
T Consensus 392 k~~G~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 392 VIGGVNVDPREVERLIIED 410 (705)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999763
No 26
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.45 E-value=2.9e-11 Score=133.14 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=93.7
Q ss_pred ccCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC--CCCCcccccceecCCceEEEEEeCC
Q 008068 290 ELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 290 ~lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~--~~~~~~~~~~~l~~~~~~~Efip~~ 364 (579)
...++++ .+..||. ....+.+++.+ +++++ +.||+||+.+..... ..+..+..|.. ..+..+.+++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~--~~~~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVGFP--LPGVSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCcccccC--CCCcEEEEEECC
Confidence 3456788 6677763 44556677777 57888 999999975432211 11111112221 233456666643
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
++. .+..|+.|||+|++ ..||| +|+|||+++.+. ...+.|+||
T Consensus 339 -----------~~~-----~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR 398 (504)
T PRK07514 339 -----------TGA-----ELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGR 398 (504)
T ss_pred -----------CCC-----CCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEecc
Confidence 123 35679999999977 45666 499999999985 578999999
Q ss_pred eCceEeeceeecCHHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+|+++++|+++++.+||+++.+.
T Consensus 399 ~~~~i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 399 GKDLIISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred ccceEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999998753
No 27
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.44 E-value=2.6e-11 Score=136.24 Aligned_cols=133 Identities=18% Similarity=0.245 Sum_probs=92.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++++ .+..||. ....+.+++.+ +++++ +.||+||+...+...+. ..++..|.. .++ ..+++++.+
T Consensus 335 ~~~lr---~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~- 406 (573)
T PRK05605 335 LSGVR---NAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGVP-FPD-TEVRIVDPE- 406 (573)
T ss_pred chhcc---EEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCccccC-CCC-CEEEEEcCC-
Confidence 45788 6666763 45556666666 58888 99999997533222111 111223332 233 456776654
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
.. +. ++..|+.|||+|++ ..|+| +|+|||+++.+. ...+.|+||.+
T Consensus 407 -~~--------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR~d 468 (573)
T PRK05605 407 -DP--------DE-----TMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDRIK 468 (573)
T ss_pred -CC--------Cc-----cCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEeccc
Confidence 11 12 45679999999976 35666 699999999985 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~ 450 (579)
|+++++|++|++.+||+++..
T Consensus 469 d~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 469 ELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred cceeeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 28
>PLN02654 acetate-CoA ligase
Probab=99.44 E-value=1.6e-10 Score=132.83 Aligned_cols=226 Identities=12% Similarity=0.061 Sum_probs=129.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCC--CCeeccccccCcccce-ecCCCCC---CcccccceecCCceEEEEEeC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGD--LPLMSADYGSSEGWIG-ANVNPSL---PPELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~--v~v~~~~YgaSEg~i~-~~~~~~~---~~~~~~~~l~~~~~~~Efip~ 363 (579)
++|+ .+.+||. ....+.+.+.+|+ +++. +.||+||+... +...+.. .++..|.. .++ .-+..++.
T Consensus 397 ~~Lr---~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p-~~g-~~v~i~d~ 470 (666)
T PLN02654 397 KSLR---VLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGSATFP-FFG-VQPVIVDE 470 (666)
T ss_pred hhee---EEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCccCCC-CCC-ceEEEECC
Confidence 5678 5666663 4444556666753 7888 99999996432 2111111 12223332 222 22333332
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEcc-----cccee----------------ccccCCEEEEeceeCCCCEE
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN-----VAGLY----------------RYRLGDVVKVMGFHNSTPEL 422 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt-----~~Gl~----------------RYr~GDvv~v~~~~~~~P~i 422 (579)
+ +. +++.|+.|||+|+. +.||| +|+|||+++++. ...+
T Consensus 471 ~------------g~-----~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l 529 (666)
T PLN02654 471 K------------GK-----EIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYY 529 (666)
T ss_pred C------------CC-----CCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcE
Confidence 1 22 34567789999975 23444 499999999985 6899
Q ss_pred EEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEe--ecCCCCCceEEEEEEeccC--CCHHHHHHHHH
Q 008068 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH--VDLSTDPGHYVIFWEVSGE--VNDEVLKECCN 498 (579)
Q Consensus 423 ~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~--~~~~~~~~~y~~~vE~~~~--~~~~~l~~~~~ 498 (579)
.|+||.+|+|+++|++|++.|||++|.+. .+ +.+-.++ ++.. ..-.-..||.+..+ .+.+..+++.+
T Consensus 530 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaaVvg~~d~~-~ge~~~a~Vvl~~~~~~~~~l~~~l~~ 600 (666)
T PLN02654 530 WLTGRVDDVINVSGHRIGTAEVESALVSH------PQ--CAEAAVVGIEHEV-KGQGIYAFVTLVEGVPYSEELRKSLIL 600 (666)
T ss_pred EEeeeccCeEEeCCEEECHHHHHHHHHhC------CC--eeeEEEEeeEcCC-CCeEEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999853 12 3344433 2211 11133456666433 22222233444
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 008068 499 CLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (579)
Q Consensus 499 ~ld~~L~n~~Y~~~R~~~~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (579)
.+.+.| .....|-+|.+|+ .|-..+-.=..+..|. ..+.+.+.-+. |++.++.+.+
T Consensus 601 ~~~~~L----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 662 (666)
T PLN02654 601 TVRNQI----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLA--DPGVVDQLIA 662 (666)
T ss_pred HHHHhC----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCccccc--CHHHHHHHHH
Confidence 444443 1223455677763 3332221111122342 22677788888 9999888764
No 29
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.43 E-value=3e-11 Score=134.76 Aligned_cols=134 Identities=14% Similarity=0.153 Sum_probs=91.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecC-CCC--CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPS--LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~-~~~--~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++++ +++.||. ....+.+++.+ +++++ +.||+||+...... ... ..++..|+++ + +..++.+..+
T Consensus 311 ~~~l~---~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~v~~~d- 382 (541)
T TIGR03205 311 LSSLA---TIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-P-GIELDVVSLD- 382 (541)
T ss_pred ccccc---eEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec-c-CceeEEEecC-
Confidence 34677 6677773 44555666667 58999 99999997432211 111 1112244433 2 2234444433
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. +. +++.|+.|||+|++ ..||| ||+|||++++.. ...+.|+||.+
T Consensus 383 -~~--------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~ 444 (541)
T TIGR03205 383 -DP--------TK-----VLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKK 444 (541)
T ss_pred -CC--------Cc-----cCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEcccc
Confidence 11 22 45679999999987 35555 699999999974 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++|+++++.+||+++.+.
T Consensus 445 ~~i~~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 445 DMIISGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred CeEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 30
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.43 E-value=2e-11 Score=134.18 Aligned_cols=132 Identities=12% Similarity=0.220 Sum_probs=88.2
Q ss_pred CCCCceeeEEeecChHHHHHHHHHHh-CCCCeeccccccCcccce--ecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSMEHYLKKLRHYA-GDLPLMSADYGSSEGWIG--ANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~~~~~~~l~~~~-g~v~v~~~~YgaSEg~i~--~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.++++ .+.+||.......+++++ .+++++ +.||+||+... +...+. ..++..|. ...+..+++++.+
T Consensus 251 ~~~l~---~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~--~~~~~~~~i~d~~- 323 (488)
T PRK09088 251 LRHLT---ALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI--PTPTVQTRVVDDQ- 323 (488)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCcccc--CCCCcEEEEECCC-
Confidence 35677 777777532222233322 158999 89999997432 221111 11222232 2234455655432
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+. ++..|+.|||+|++ ..||| +|+|||+++++. ...+.|+||.
T Consensus 324 -----------~~-----~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~ 383 (488)
T PRK09088 324 -----------GN-----DCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRK 383 (488)
T ss_pred -----------CC-----CCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccc
Confidence 12 34678999999987 35555 499999999985 5789999999
Q ss_pred CceEeeceeecCHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+|+++++|+++++.+||++|.+
T Consensus 384 ~d~i~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 384 KDMFISGGENVYPAEIEAVLAD 405 (488)
T ss_pred cceEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999875
No 31
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.43 E-value=6.2e-11 Score=132.08 Aligned_cols=133 Identities=17% Similarity=0.160 Sum_probs=91.1
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCcccccceecCCceEEEEEeCCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
+++++ ++.+||. ....+++.+.+ +++++ +.||+||+...+...+. ...+..|.. .+ +.-+..++.+
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~-g~~~~i~d~~-- 374 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIP-TF-GVDARVIDPE-- 374 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCcc-cC-CeEEEEEeCC--
Confidence 46778 6677773 44556677777 58898 99999997543322111 111112222 12 2223344432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee-----------------ccccCCEEEEeceeCCCCEEEEEe
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFHNSTPELKFIC 426 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------RYr~GDvv~v~~~~~~~P~i~f~g 426 (579)
++. +++.|+.|||+|.+ ..||| +|+|||+++++. ...+.++|
T Consensus 375 ---------~~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~G 436 (546)
T PRK08314 375 ---------TLE-----ELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITD 436 (546)
T ss_pred ---------CCc-----CCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEe
Confidence 122 45789999999966 35554 799999999985 57899999
Q ss_pred eeCceEeeceeecCHHHHHHHHHHH
Q 008068 427 RRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 427 R~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|.+|+++++|++|++.+||++|.+.
T Consensus 437 R~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 437 RLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred cchhhEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999864
No 32
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.42 E-value=5.9e-11 Score=132.18 Aligned_cols=111 Identities=18% Similarity=0.160 Sum_probs=78.4
Q ss_pred CCCeeccccccCcccceecCCCCCC-----cccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEE
Q 008068 319 DLPLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEI 393 (579)
Q Consensus 319 ~v~v~~~~YgaSEg~i~~~~~~~~~-----~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeL 393 (579)
+++++ +.||+||+...+....... ....+.++. .+...++++++ ++. .++.|+.|||
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~-----------~~~-----~~~~g~~Gel 380 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQ-----------DGA-----LLPDGESGEI 380 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCC-----------CCc-----CCCCCCeeEE
Confidence 58899 9999999854332211110 011233222 23455666543 123 4577999999
Q ss_pred EEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 394 IVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 394 VvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|++ +.||| +|+|||++++++ ...+.|+||.+|+++++|+++++.+||+++.+.
T Consensus 381 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~ 451 (540)
T PRK06164 381 EIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEAL 451 (540)
T ss_pred EEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHhC
Confidence 9988 35554 599999999985 578999999999999999999999999999753
No 33
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.42 E-value=1.3e-10 Score=132.40 Aligned_cols=132 Identities=7% Similarity=0.042 Sum_probs=89.1
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC-----CCcccccceecCCceEEEEEeC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~-~~~~~-----~~~~~~~~~l~~~~~~~Efip~ 363 (579)
++|+ .+.+||. ....+.+++.+ +++++ +.||+||....+ ...+. ..++..|.. .+ +.-+++++.
T Consensus 355 ~~lr---~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~i~d~ 427 (629)
T PRK10524 355 SSLR---ALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGVP-MY-GYNVKLLNE 427 (629)
T ss_pred hhee---EEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCcccC-cC-CceEEEEeC
Confidence 5677 6677773 44555667777 58999 999999975211 11111 111122332 12 223445544
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEccc------ccee-----------------ccccCCEEEEeceeCCCC
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNSTP 420 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~-----------------RYr~GDvv~v~~~~~~~P 420 (579)
+ +++ ++++|+.|||+|+.. .|+| +|+|||+++++. ..
T Consensus 428 ~-----------~g~-----~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----dG 487 (629)
T PRK10524 428 V-----------TGE-----PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA----DG 487 (629)
T ss_pred C-----------CCC-----CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC----CC
Confidence 2 123 456899999999763 2222 599999999974 67
Q ss_pred EEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 421 ~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.|+||.+|+|+++|++|.+.+||++|.+.
T Consensus 488 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~ 518 (629)
T PRK10524 488 YYFILGRTDDVINVAGHRLGTREIEESISSH 518 (629)
T ss_pred cEEEEEEecCeEEeCCEEeCHHHHHHHHHhC
Confidence 8999999999999999999999999999753
No 34
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.42 E-value=1.1e-10 Score=133.83 Aligned_cols=227 Identities=14% Similarity=0.080 Sum_probs=129.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceecCC-CCC--CcccccceecCCceEEEEEeCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g-~v~v~~~~YgaSEg~i~~~~~-~~~--~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
++|+ ++.+||. ....+.+.+.++ ++++. +.||+||....+... +.. .++..+.. .+ +.-+..++.+
T Consensus 383 ~sLr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~-g~~~~ivd~~- 455 (655)
T PRK03584 383 SALR---TIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQCR-GL-GMAVEAWDED- 455 (655)
T ss_pred hheE---EEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCCC-cC-CceeEEECCC-
Confidence 5677 6677763 445555666663 57888 999999963222111 111 11112221 12 2223333322
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc-----ccee------------------ccccCCEEEEeceeCCCCEE
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY------------------RYRLGDVVKVMGFHNSTPEL 422 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~------------------RYr~GDvv~v~~~~~~~P~i 422 (579)
+. ++ .|+.|||+|+.. .||| .|+|||+++++. ...+
T Consensus 456 -----------g~-----~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l 514 (655)
T PRK03584 456 -----------GR-----PV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGV 514 (655)
T ss_pred -----------CC-----CC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeE
Confidence 22 33 588999999752 3444 278999999985 6799
Q ss_pred EEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEee-cCCCCCceEEEEEEeccC--CCHHHHHHHHHH
Q 008068 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHV-DLSTDPGHYVIFWEVSGE--VNDEVLKECCNC 499 (579)
Q Consensus 423 ~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~-~~~~~~~~y~~~vE~~~~--~~~~~l~~~~~~ 499 (579)
.|+||.+|+|+++|++|++.|||++|.+. .+ +.+-.++. +.......-+.||++..+ .+.+..+++.+.
T Consensus 515 ~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~ 586 (655)
T PRK03584 515 VIYGRSDATLNRGGVRIGTAEIYRQVEAL------PE--VLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTT 586 (655)
T ss_pred EEEeeccCeeecCcEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999753 22 23333332 111122344577877543 222223344444
Q ss_pred HHHhccChhhHHHhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 008068 500 LDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (579)
Q Consensus 500 ld~~L~n~~Y~~~R~~~~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (579)
+.+.| .....|-.|.+|+ .|--.+..=+.+..|...+|...+.-+. |++.++.+.+
T Consensus 587 ~~~~L----------~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 648 (655)
T PRK03584 587 IRTNL----------SPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALA--NPEALDWFAD 648 (655)
T ss_pred HHhhC----------CCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCccccc--CHHHHHHHHH
Confidence 44443 1123455666653 3332221111223465555554566677 8888887753
No 35
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.42 E-value=5.3e-11 Score=131.79 Aligned_cols=132 Identities=14% Similarity=0.059 Sum_probs=82.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceecC-CCCC--CcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANV-NPSL--PPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g-~v~v~~~~YgaSEg~i~~~~-~~~~--~~~~~~~~l~~~~~~~Efip~~ 364 (579)
+++|+ .+.+||. ......+++.++ ++++. +.||+||+...+.. .+.. .++..|..+ ++ .-+.+++.+
T Consensus 235 ~~~Lr---~i~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~-~~-~~~~ivd~~ 308 (499)
T PLN03051 235 WSKLR---VFASTGEASAVDDVLWLSSVRGYYKPVI-EYCGGTELASGYISSTLLQPQAPGAFSTAS-LG-TRFVLLNDN 308 (499)
T ss_pred chhhe---EEEecCCCCCHHHHHHHHHhccccceeE-eeeccccccceeecccccCCCCCccccCCC-CC-ceEEEECCC
Confidence 35788 6666663 333344444332 37788 99999996432211 1111 111223321 22 122233321
Q ss_pred CCCcccccccCCCccccccccCCC--ceEEEEEccc-----ccee---------------------ccccCCEEEEecee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVG--EEYEIIVTNV-----AGLY---------------------RYRLGDVVKVMGFH 416 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G--~~yeLVvTt~-----~Gl~---------------------RYr~GDvv~v~~~~ 416 (579)
+. ++.+| +.|||+|... .||| +|+|||+++++.
T Consensus 309 ------------g~-----~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~-- 369 (499)
T PLN03051 309 ------------GV-----PYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTP-- 369 (499)
T ss_pred ------------CC-----CCCCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECC--
Confidence 23 34556 5799999642 2332 489999999985
Q ss_pred CCCCEEEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 417 NSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 417 ~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
...+.|+||.+|+|+++|++|++.|||++|.+
T Consensus 370 --dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 370 --GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred --CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 67999999999999999999999999999985
No 36
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.41 E-value=4.9e-11 Score=131.25 Aligned_cols=133 Identities=13% Similarity=0.112 Sum_probs=93.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CC-CcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SL-PPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~---~~-~~~~~~~~l~~~~~~~Efip~~ 364 (579)
.++++ .+.+||. ...++.+.+.|++++++ +.||+||+........ .. ..+..|..+ + +.-++.++.+
T Consensus 263 ~~~l~---~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~~~~ 336 (497)
T PRK06145 263 LDSLA---WCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRAL-A-HVEIRIADGA 336 (497)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccCC-C-CceEEEECCC
Confidence 35677 6666773 55667777788778999 9999999854221111 11 111233322 2 2334444432
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+. ++..|+.|||++++ ..||| +|+|||+++.+. ...+.++||.
T Consensus 337 ------------~~-----~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~ 395 (497)
T PRK06145 337 ------------GR-----WLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRK 395 (497)
T ss_pred ------------CC-----CCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccc
Confidence 12 34678999999977 46676 599999999985 6789999999
Q ss_pred CceEeeceeecCHHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+++++|+++++.+||.++.+.
T Consensus 396 ~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 396 KDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred cceEEeCCeEECHHHHHHHHHhC
Confidence 99999999999999999999764
No 37
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.41 E-value=4.1e-11 Score=131.71 Aligned_cols=128 Identities=15% Similarity=0.073 Sum_probs=91.2
Q ss_pred EEeecC--hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCCCCccccccc
Q 008068 300 GIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374 (579)
Q Consensus 300 ~~~~g~--~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~ 374 (579)
.+.+|+ .....+++.+.+++++++ +.||+||+.......+.. .....|..+ .+..++.++.+
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~---------- 324 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGRPF--HNVQVRICNEA---------- 324 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCccc--CCcEEEEECCC----------
Confidence 455555 355667778888889999 999999985433222111 111234322 33456666532
Q ss_pred CCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceee
Q 008068 375 IEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDK 438 (579)
Q Consensus 375 ~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gek 438 (579)
+. ++++|+.|||+|++ ..|+| +|+|||++.++. ...+.|+||.+|+++++|++
T Consensus 325 --g~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~G~~ 393 (487)
T PRK07638 325 --GE-----EVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFGGIN 393 (487)
T ss_pred --CC-----CCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeCCEE
Confidence 22 45789999999977 35555 689999999885 68999999999999999999
Q ss_pred cCHHHHHHHHHHH
Q 008068 439 NTEKDLQLSVDEA 451 (579)
Q Consensus 439 v~e~~v~~av~~~ 451 (579)
|++.+||+++.+.
T Consensus 394 v~~~eiE~~l~~~ 406 (487)
T PRK07638 394 IFPEEIESVLHEH 406 (487)
T ss_pred ECHHHHHHHHHhC
Confidence 9999999999753
No 38
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.41 E-value=3.2e-11 Score=134.71 Aligned_cols=132 Identities=16% Similarity=0.116 Sum_probs=92.0
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++++ .+.+|| ......++++.+| .+++ +.||+||+.......+. ..++..|.. . .+.-+++++.+
T Consensus 311 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p-~-~~~~~~i~d~~- 382 (537)
T PRK13382 311 GRSLR---FAAASGSRMRPDVVIAFMDQFG-DVIY-NNYNATEAGMIATATPADLRAAPDTAGRP-A-EGTEIRILDQD- 382 (537)
T ss_pred cccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-ecccccccCcceecChhHhccCCCCcccc-C-cCcEEEEECCC-
Confidence 35678 667776 3556677777784 6888 99999997543221111 011123332 1 23445555543
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc---cce----------eccccCCEEEEeceeCCCCEEEEEeeeCceE
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGL----------YRYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl----------~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 432 (579)
+. ++..|+.|||+|++. .|| -+|+|||+++.+. ...+.|+||.+|++
T Consensus 383 -----------~~-----~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i 442 (537)
T PRK13382 383 -----------FR-----EVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMI 442 (537)
T ss_pred -----------CC-----CCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEecccccee
Confidence 12 456799999999773 444 2799999999985 57899999999999
Q ss_pred eeceeecCHHHHHHHHHHH
Q 008068 433 TINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 433 ~~~Gekv~e~~v~~av~~~ 451 (579)
+++|++|++.+||.++.+.
T Consensus 443 k~~G~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 443 VSGGENVYPIEVEKTLATH 461 (537)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 39
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.41 E-value=6.8e-11 Score=129.92 Aligned_cols=132 Identities=17% Similarity=0.217 Sum_probs=86.5
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-------CcccccceecCCceEEEEE
Q 008068 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-------PPELATFAVLPNIGYFEFI 361 (579)
Q Consensus 292 wP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~-------~~~~~~~~l~~~~~~~Efi 361 (579)
.++++ .+.+|| .....+.+.+.+++++++ +.||+||....+...+.+ .....++. .++. -...+
T Consensus 259 ~~~l~---~i~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~-~~~i~ 332 (503)
T PRK04813 259 LPNLT---HFLFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGYA-KPDS-PLLII 332 (503)
T ss_pred CCCce---EEEEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCccccc-CCCC-EEEEE
Confidence 46788 445555 356667788888778888 999999964322111111 00011221 1111 11122
Q ss_pred eCCCCCcccccccCCCccccccccCCCceEEEEEccc---ccee-----------------ccccCCEEEEeceeCCCCE
Q 008068 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 362 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-----------------RYr~GDvv~v~~~~~~~P~ 421 (579)
+.+ +. .+..|+.|||+|++. .||| +|+|||++++ . ...
T Consensus 333 d~~------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~ 390 (503)
T PRK04813 333 DEE------------GT-----KLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGL 390 (503)
T ss_pred CCC------------CC-----CCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCe
Confidence 221 22 356788999999763 2222 6999999998 3 578
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+.+.||.+|+++++|+++++.+||+++.+.
T Consensus 391 ~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 391 LFYQGRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred EEEeccccceEEECcEEeCHHHHHHHHHhC
Confidence 999999999999999999999999998763
No 40
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.41 E-value=3.3e-11 Score=145.95 Aligned_cols=134 Identities=17% Similarity=0.208 Sum_probs=94.1
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC-----------CCcccccceecCCc
Q 008068 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS-----------LPPELATFAVLPNI 355 (579)
Q Consensus 291 lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~-----------~~~~~~~~~l~~~~ 355 (579)
-+++++ .+.+||. ....+++++.+ +++++ +.||+||+...+... +. +.++..|.. .| +
T Consensus 896 ~~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p-~~-~ 968 (1146)
T PRK08633 896 MFASLR---LVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMP-LP-G 968 (1146)
T ss_pred cCCCee---eEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCcccc-CC-C
Confidence 356788 6777773 55667777777 58999 999999974322111 00 111223332 22 3
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee-----------------ccccCCEEEEece
Q 008068 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGF 415 (579)
Q Consensus 356 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------RYr~GDvv~v~~~ 415 (579)
.-++.++++ +++ ++++|+.|||+|++ ..||| +|+|||+++.+.
T Consensus 969 ~~v~i~d~~-----------~~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~- 1031 (1146)
T PRK08633 969 VAVRIVDPE-----------TFE-----ELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE- 1031 (1146)
T ss_pred CEEEEEcCC-----------CCc-----cCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC-
Confidence 345555543 122 46789999999976 35554 599999999985
Q ss_pred eCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 416 HNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 416 ~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 1032 ---~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1032 ---DGFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred ---CceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 689999999999999999999999999999864
No 41
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.40 E-value=2.4e-11 Score=135.36 Aligned_cols=135 Identities=13% Similarity=0.094 Sum_probs=93.0
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-------CCCcccccceecCCceEEEE
Q 008068 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEF 360 (579)
Q Consensus 291 lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~-------~~~~~~~~~~l~~~~~~~Ef 360 (579)
-+++++ .+.+||. ...++.+++.+ +++++ +.||+||+...+...+ ..+....+.+-...+..+++
T Consensus 293 ~~~~lr---~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i 367 (534)
T PRK05852 293 KPAALR---FIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRI 367 (534)
T ss_pred cCCCee---EEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEE
Confidence 356788 6666663 55666777778 58998 8999999743221110 00111122321123445555
Q ss_pred EeCCCCCcccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEE
Q 008068 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKF 424 (579)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f 424 (579)
++.+ ++ ++++|+.|||+|++. .||| +|+|||+++.+. ...+.|
T Consensus 368 ~d~~------------g~-----~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~l~~ 426 (534)
T PRK05852 368 VGSD------------GL-----PLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGDLSI 426 (534)
T ss_pred ECCC------------CC-----CCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCcEEE
Confidence 5543 22 456899999999773 5555 499999999985 578999
Q ss_pred EeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 425 ICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 425 ~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+||.+|+++++|+++++.+||+++.+.
T Consensus 427 ~gR~~d~i~~~G~~v~~~~iE~~l~~~ 453 (534)
T PRK05852 427 RGRIKELINRGGEKISPERVEGVLASH 453 (534)
T ss_pred EecchhhEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999999753
No 42
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.40 E-value=3.4e-11 Score=132.54 Aligned_cols=190 Identities=17% Similarity=0.088 Sum_probs=114.1
Q ss_pred cCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC-------CcccccceecCCceEEE
Q 008068 291 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL-------PPELATFAVLPNIGYFE 359 (579)
Q Consensus 291 lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~~-------~~~~~~~~l~~~~~~~E 359 (579)
.+++++ .+..|| ....++.+.+.+ +++++ +.||+||... +....... .....|.. .+ +..++
T Consensus 279 ~~~~l~---~v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~ 351 (521)
T PRK06187 279 DFSSLR---LVIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRP-LP-GVEAR 351 (521)
T ss_pred Ccchhh---EEEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCCccccc-cC-CeEEE
Confidence 456788 555555 255666777777 68999 9999999643 22211100 11112222 22 33455
Q ss_pred EEeCCCCCcccccccCCCccccccccCC--CceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCE
Q 008068 360 FIPQRLGNLESQVLCIEPKPVGLTEVKV--GEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 360 fip~~~~~~~~~~~~~~~~~l~~~eve~--G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~ 421 (579)
+++++ +. ++.. |+.|||+|++. .|++ +|+|||+++.+. .+.
T Consensus 352 i~~~~------------~~-----~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~ 410 (521)
T PRK06187 352 IVDDD------------GD-----ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGY 410 (521)
T ss_pred EECCC------------CC-----CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCC
Confidence 55543 12 3345 99999999884 4444 399999999985 578
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecC-CCCCceEEEEEEeccCCCHHHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDL-STDPGHYVIFWEVSGEVNDEVLKECCNCL 500 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~-~~~~~~y~~~vE~~~~~~~~~l~~~~~~l 500 (579)
+.+.||.+|+++++|.++++.+||+++.+. .+ +.+..+.... ......-.++++...+.. .....+.+.+
T Consensus 411 ~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l 481 (521)
T PRK06187 411 LYITDRIKDVIISGGENIYPRELEDALYGH------PA--VAEVAVIGVPDEKWGERPVAVVVLKPGAT-LDAKELRAFL 481 (521)
T ss_pred EEEeecccceEEcCCeEECHHHHHHHHHhC------CC--ceEEEEEeccCCCcCceEEEEEEECCCCC-CCHHHHHHHH
Confidence 999999999999999999999999988753 23 3344443321 111234456777643311 1122333344
Q ss_pred HHhccChhhHHHhhcCCcCCeEEEEec
Q 008068 501 DRSFVDAGYVSARKVNAIGPLELRVVL 527 (579)
Q Consensus 501 d~~L~n~~Y~~~R~~~~l~p~~v~~v~ 527 (579)
.+.| .....|..+++|+
T Consensus 482 ~~~l----------~~~~~p~~i~~v~ 498 (521)
T PRK06187 482 RGRL----------AKFKLPKRIAFVD 498 (521)
T ss_pred HHhc----------cCCCCceEEEEcc
Confidence 4443 2234677777774
No 43
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.39 E-value=5.5e-11 Score=132.74 Aligned_cols=159 Identities=10% Similarity=0.046 Sum_probs=101.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-----CcccccceecCCceEEEEEeC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-----PPELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~-----~~~~~~~~l~~~~~~~Efip~ 363 (579)
+++++ .+..||. ....+.+.+.+++.++. ..||+||+.........+ .....|.. .+ +..++++++
T Consensus 316 ~~~lr---~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p-~~-~~~~~i~d~ 389 (558)
T PRK12583 316 LSSLR---TGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGRT-QP-HLEVKVVDP 389 (558)
T ss_pred chhhe---EEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCcc-CC-CCeEEEECC
Confidence 46788 5565652 55556677777666788 999999985422211111 01112332 22 344555544
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEEe
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 426 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~g 426 (579)
+ +. +++.|+.|||+|++. .||| +|+|||+++.+. ...+.|.|
T Consensus 390 ~------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~G 448 (558)
T PRK12583 390 D------------GA-----TVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVG 448 (558)
T ss_pred C------------CC-----CCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEe
Confidence 2 12 457899999999763 4554 599999999975 57899999
Q ss_pred eeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEec
Q 008068 427 RRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVS 485 (579)
Q Consensus 427 R~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE~~ 485 (579)
|.+++++++|++|++.+||+++.+. .+ +.+..+... ........+.+++..
T Consensus 449 R~~~~i~~~G~~v~~~~IE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~ 500 (558)
T PRK12583 449 RSKDMIIRGGENIYPREIEEFLFTH------PA--VADVQVFGVPDEKYGEEIVAWVRLH 500 (558)
T ss_pred cccceeEECCEEeCHHHHHHHHHhC------CC--eeEEEEEeeecCCCCcEEEEEEEEC
Confidence 9999999999999999999998742 23 345554332 111123445677764
No 44
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.39 E-value=7.5e-11 Score=129.90 Aligned_cols=131 Identities=18% Similarity=0.176 Sum_probs=88.7
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCC-CeeccccccCcccceecCCCCC---C--cccccceecCCceEEEEEe
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDL-PLMSADYGSSEGWIGANVNPSL---P--PELATFAVLPNIGYFEFIP 362 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v-~v~~~~YgaSEg~i~~~~~~~~---~--~~~~~~~l~~~~~~~Efip 362 (579)
.++++ .+.+||. ...++.+++.++ + +++ +.||+||+...+...... . ++..|.. . .+.-+++++
T Consensus 280 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~-~-~~~~~~i~d 352 (513)
T PRK07656 280 LSSLR---LAVTGAASMPVALLERFESELG-VDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIGTA-I-AGVENKIVN 352 (513)
T ss_pred cccee---eEEecCCCCCHHHHHHHHHHcC-CCceE-eEEccccCCCceeecCccccccccCCCcccc-C-CCcEEEEEC
Confidence 35677 6666662 555666777784 6 788 999999983322111111 0 1112221 2 233445554
Q ss_pred CCCCCcccccccCCCccccccccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEE
Q 008068 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFI 425 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~ 425 (579)
++ +. .++.|+.|||+|++. .||| +|+|||+++.+. ...+.++
T Consensus 353 ~~------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~~~ 411 (513)
T PRK07656 353 EL------------GE-----EVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLYIV 411 (513)
T ss_pred CC------------CC-----CCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEEEE
Confidence 32 12 457899999999874 3443 499999999975 6789999
Q ss_pred eeeCceEeeceeecCHHHHHHHHHH
Q 008068 426 CRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 426 gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
||.+|++++.|.++++.+||++|.+
T Consensus 412 GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 412 DRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred ecccceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999975
No 45
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.39 E-value=1.1e-10 Score=130.47 Aligned_cols=130 Identities=12% Similarity=0.134 Sum_probs=91.9
Q ss_pred CCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC---CcccccceecCCceEEEEEeCCCC
Q 008068 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 294 ~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
+++ ++.+||. ...++.+++.+++++++ +.||+||+.. +....... ..+..|..+ .+..+++++.+
T Consensus 291 ~lr---~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~-- 362 (542)
T PRK07786 291 ALR---VLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKVI--PTVAARVVDEN-- 362 (542)
T ss_pred ceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccccC--CCceEEEECCC--
Confidence 466 6666663 55677788888888999 9999999743 22111110 111123322 33456666543
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
.. ++..|+.|||++.+ ..||| +|+|||+++.+. ...+.++||.+|
T Consensus 363 ----------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d 423 (542)
T PRK07786 363 ----------MN-----DVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKD 423 (542)
T ss_pred ----------CC-----CCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccc
Confidence 12 45679999999966 36666 499999999975 578999999999
Q ss_pred eEeeceeecCHHHHHHHHHH
Q 008068 431 LLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 431 ~i~~~Gekv~e~~v~~av~~ 450 (579)
+++++|+++++.+||++|.+
T Consensus 424 ~i~~~G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 424 MIISGGENIYCAEVENVLAS 443 (542)
T ss_pred eEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999975
No 46
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.38 E-value=1.4e-10 Score=128.12 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=88.9
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
++++ .+..||. ....+.+++.+++++++ +.||+||+.. +....+. ...+..|..+ + +..+..++.+
T Consensus 286 ~~l~---~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~~~~- 358 (523)
T PRK08316 286 SSLR---KGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRPV-L-NVETRVVDDD- 358 (523)
T ss_pred ccce---EEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCcccCC-C-CcEEEEEcCC-
Confidence 4566 5565652 45566778878788999 9999999643 2211111 1111122221 1 1222333321
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. ++..|+.|||++++. .||| +|+|||+++.+. .+.+.++||.+
T Consensus 359 -----------~~-----~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~ 418 (523)
T PRK08316 359 -----------GN-----DVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKK 418 (523)
T ss_pred -----------CC-----CCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccc
Confidence 22 345699999999773 5555 599999999985 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++|++|++.+||+++.+.
T Consensus 419 ~~i~~~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 419 DMIKTGGENVASREVEEALYTH 440 (523)
T ss_pred cEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999653
No 47
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.38 E-value=7.2e-11 Score=131.63 Aligned_cols=132 Identities=11% Similarity=0.113 Sum_probs=90.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC----CcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL----PPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~----~~~~~~~~l~~~~~~~Efip~~ 364 (579)
.|+++ .+.+||. ....+++.+.+ +++++ +.||+||+.......+.. .....|.. .+ +.-+++++.+
T Consensus 309 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~-g~~v~i~~~~ 381 (538)
T TIGR03208 309 VPSLF---TFLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVTEPDDALEKASTTDGRP-LP-GVEVKVIDAN 381 (538)
T ss_pred CCcce---EEEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCccccCcccchhhccCccccc-CC-CCEEEEECCC
Confidence 36788 5666663 45555666667 58998 999999974322111111 01112332 22 2344444432
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEccc---ccee------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. +++.|+.|||+|++. .||| +|+|||+++.+. ...+.|+||.+
T Consensus 382 ------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~ 440 (538)
T TIGR03208 382 ------------GA-----KLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSK 440 (538)
T ss_pred ------------CC-----CCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccC
Confidence 12 456799999999773 5666 599999999975 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++|++|.+.+||+++.+.
T Consensus 441 ~~i~~~G~~v~p~eIE~~l~~~ 462 (538)
T TIGR03208 441 DVIIRGGENIPVVEIENLLYQH 462 (538)
T ss_pred ceEEECCEEECHHHHHHHHhcC
Confidence 9999999999999999999753
No 48
>PLN02246 4-coumarate--CoA ligase
Probab=99.38 E-value=1e-10 Score=130.42 Aligned_cols=132 Identities=13% Similarity=0.117 Sum_probs=90.6
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-------CCcccccceecCCceEEEEEe
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-------LPPELATFAVLPNIGYFEFIP 362 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~-------~~~~~~~~~l~~~~~~~Efip 362 (579)
++++ .+..||. ....+.+++.++++++. +.||+||+...+..... ..++..|..+ .+.-.+.++
T Consensus 298 ~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d 371 (537)
T PLN02246 298 SSIR---MVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVV--RNAELKIVD 371 (537)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccccc--CCcEEEEec
Confidence 5677 6666663 55666777778778888 99999997532211000 0111123321 223444554
Q ss_pred CCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEE
Q 008068 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFI 425 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~ 425 (579)
++ +.. +++.|+.|||+|++ ..||| +|+|||+++++. ...+.|+
T Consensus 372 ~~-----------~~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~ 431 (537)
T PLN02246 372 PE-----------TGA-----SLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIV 431 (537)
T ss_pred CC-----------CCC-----cCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEE
Confidence 32 112 45789999999976 35554 589999999985 5789999
Q ss_pred eeeCceEeeceeecCHHHHHHHHHH
Q 008068 426 CRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 426 gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
||.+|+++++|++|++.+||+++.+
T Consensus 432 GR~dd~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 432 DRLKELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred ecccceEEECCEEECcHHHHHHHHh
Confidence 9999999999999999999999975
No 49
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.38 E-value=5.8e-11 Score=131.30 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=93.4
Q ss_pred ccCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCCCcccccceecCCceEEEEEeCCC
Q 008068 290 ELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 290 ~lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
...++|+ .+.|.|- ++....+.+.+| +++. +.||+||.+. .+...+...++..+.. .| +.-.+.++.+
T Consensus 287 ~dlssLr---~~~SaGEPLnpe~~~w~~~~~g-~~i~-d~~gqTEtg~~~~~~~~~~~~g~~g~p-~p-G~~~~vvdd~- 358 (528)
T COG0365 287 YDLSSLR---VLGSAGEPLNPEAFEWFYSALG-VWIL-DIYGQTETGMGFIAGRPPVKNGSSGLP-LP-GYAVRRVDDE- 358 (528)
T ss_pred ccchhhe---eeeccCCCCCHHHHHHHHHHhC-CCEe-ccccccccCccccCCCCCcCCCCCCCC-CC-CceeEEECCC-
Confidence 3456788 6667763 555566777784 9999 9999999762 2211111112222332 23 3345555542
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc-----cceec-------------cccCCEEEEeceeCCCCEEEEEee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLYR-------------YRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~R-------------Yr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
+ + ++++|+ |+|+|... .|+|. |.|||.+..+. .+.+.|+||
T Consensus 359 ---g--------~-----~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i~GR 417 (528)
T COG0365 359 ---G--------N-----PVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWLHGR 417 (528)
T ss_pred ---C--------C-----cCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEEEee
Confidence 2 2 456788 99999863 34664 99999999996 799999999
Q ss_pred eCceEeeceeecCHHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+|+||+.|..|...|||++|.+.
T Consensus 418 ~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 418 SDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred ccceEeccCeeccHHHHHHHHHhC
Confidence 999999999999999999999865
No 50
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.38 E-value=1.2e-10 Score=129.63 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=54.5
Q ss_pred ccCCCceEEEEEcc---cccee---------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 384 EVKVGEEYEIIVTN---VAGLY---------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 384 eve~G~~yeLVvTt---~~Gl~---------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+++.|+.|||+|++ +.||| +|+|||+++.+ ...+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 366 ~~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 366 GVAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred cCCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 35779999999976 35676 69999999875 367999999999999999999999999999864
No 51
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.38 E-value=1.7e-11 Score=137.73 Aligned_cols=149 Identities=14% Similarity=0.176 Sum_probs=88.3
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCC
Q 008068 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 291 lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
..++++ .+.+||. ....+++++.|++++++ +.||+||+...+......++..... ......+.......
T Consensus 286 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 357 (563)
T PLN02860 286 VFPSVR---KILNGGGSLSSRLLPDAKKLFPNAKLF-SAYGMTEACSSLTFMTLHDPTLESP----KQTLQTVNQTKSSS 357 (563)
T ss_pred ccccee---EEEeCCCcCCHHHHHHHHHhcCCCcee-cCCCccccCcccccccccccccccc----hhhhhhhccccccc
Confidence 346788 7777773 55566777788789999 9999999743222111000000000 00000000000000
Q ss_pred cccccccCCCcccc-----ccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEE
Q 008068 368 LESQVLCIEPKPVG-----LTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFI 425 (579)
Q Consensus 368 ~~~~~~~~~~~~l~-----~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~ 425 (579)
........-+.+++ +...++|+.|||+|.+ +.||| +|+|||+++++. ...+.|+
T Consensus 358 ~~~~~~~~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~ 433 (563)
T PLN02860 358 VHQPQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLI 433 (563)
T ss_pred ccccCCcccCCccCCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEe
Confidence 00000000011111 1111268899999976 45665 689999999975 6889999
Q ss_pred eeeCceEeeceeecCHHHHHHHHHHH
Q 008068 426 CRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 426 gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
||.+|+++++|++|++.+||+++.+.
T Consensus 434 GR~~d~i~~~G~~v~p~eIE~~l~~~ 459 (563)
T PLN02860 434 GRSNDRIKTGGENVYPEEVEAVLSQH 459 (563)
T ss_pred ecccceeEECCEEccHHHHHHHHHhC
Confidence 99999999999999999999998753
No 52
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.37 E-value=1.9e-11 Score=139.88 Aligned_cols=135 Identities=14% Similarity=0.109 Sum_probs=89.9
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++++ .+.+||+ ....+.+++.+ +++++ ++||+||+...+.... ....+..|..+ | +.-+.+++.+ +
T Consensus 376 ~~lr---~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~-p-g~~v~i~d~~--~ 446 (651)
T PLN02736 376 GRVR---FMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGSPN-P-ACEVKLVDVP--E 446 (651)
T ss_pred CcEE---EEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCCcc-C-ceEEEEEEcc--c
Confidence 3677 6677774 45555666667 58888 9999999754332211 11122233322 2 3344555543 1
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
. .. ..+.+++..|||+|.+ +.||| +|+|||+++++. ...+.|+||.+|
T Consensus 447 ~---------~~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd 511 (651)
T PLN02736 447 M---------NY--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKN 511 (651)
T ss_pred c---------Cc--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechh
Confidence 1 00 0122445578999966 47777 699999999985 678999999999
Q ss_pred eEee-ceeecCHHHHHHHHHHH
Q 008068 431 LLTI-NIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 431 ~i~~-~Gekv~e~~v~~av~~~ 451 (579)
+|++ +|++|++.+||+++.+.
T Consensus 512 ~ik~~~G~~V~p~eIE~~l~~~ 533 (651)
T PLN02736 512 IFKLAQGEYIAPEKIENVYAKC 533 (651)
T ss_pred heEcCCCcEechHHHHHHHhcC
Confidence 9997 69999999999999753
No 53
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.37 E-value=1.3e-10 Score=132.53 Aligned_cols=63 Identities=27% Similarity=0.287 Sum_probs=54.7
Q ss_pred ccCCCceEEEEEcc---cccee-------------------------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 384 EVKVGEEYEIIVTN---VAGLY-------------------------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 384 eve~G~~yeLVvTt---~~Gl~-------------------------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+++.|+.|||+|.. ..||| +|||||+++.. ...+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 56789999999976 34554 59999999884 47899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+|+++|++|++.|||.+|.+.
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhc
Confidence 9999999999999999999864
No 54
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.37 E-value=2.4e-10 Score=128.25 Aligned_cols=130 Identities=16% Similarity=0.225 Sum_probs=89.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ .+.+||. ....+.+++.+ +++++ +.||+||+.......+. ...+..|..+ + +.-+++++++
T Consensus 333 ~~lr---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~-~-~~~v~ivd~~-- 403 (562)
T PRK12492 333 SALK---LTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGIPV-P-GTALKVIDDD-- 403 (562)
T ss_pred ccee---EEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccceec-C-CCEEEEECCC--
Confidence 4677 5666663 45556666667 58999 99999997432211111 1112233322 2 2234444432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. ++.+|+.|||+|++ ..||| +|+|||+++++. ...+.|+||.+
T Consensus 404 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~ 464 (562)
T PRK12492 404 ----------GN-----ELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKK 464 (562)
T ss_pred ----------CC-----CCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccC
Confidence 22 34679999999976 34555 599999999985 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~ 450 (579)
|++++.|+++++.+||.++.+
T Consensus 465 ~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 465 DLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred CeEEECCEEECHHHHHHHHHh
Confidence 999999999999999999875
No 55
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.36 E-value=2.4e-10 Score=126.04 Aligned_cols=133 Identities=18% Similarity=0.242 Sum_probs=89.7
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.++++ .+.+|| .....+.+++.+++++++ +.||+||+.......+.. .++..|.. . .+..+.+++.+
T Consensus 273 ~~~l~---~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~-~-~~~~~~i~~~~- 345 (515)
T TIGR03098 273 APSLR---YLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGKA-I-PNAEVLVLRED- 345 (515)
T ss_pred ccceE---EEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCccee-c-CCCEEEEECCC-
Confidence 34677 556565 255666777778778888 999999975333222211 11122322 1 22334444432
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------------------ccccCCEEEEeceeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------------------RYRLGDVVKVMGFHN 417 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------------------RYr~GDvv~v~~~~~ 417 (579)
+. ++..|+.|||++.+ ..|+| +|+|||++++..
T Consensus 346 -----------~~-----~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~--- 406 (515)
T TIGR03098 346 -----------GS-----ECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE--- 406 (515)
T ss_pred -----------CC-----CCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC---
Confidence 22 34568899999966 24444 488999999874
Q ss_pred CCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 418 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
...+.+.||.+|+++++|++|++.+||+++.+.
T Consensus 407 -~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~ 439 (515)
T TIGR03098 407 -EGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYAT 439 (515)
T ss_pred -CceEEEEeccccceecCCEEeCHHHHHHHHhcC
Confidence 568999999999999999999999999999753
No 56
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.36 E-value=1.4e-11 Score=141.45 Aligned_cols=134 Identities=18% Similarity=0.223 Sum_probs=89.9
Q ss_pred CCCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~--~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++|+ .+.+||+ .....++.+.+++++++ ++||+||+...+... +. ...+..|..+ |+ .-+-+++++ +
T Consensus 386 ~~lr---~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~-pg-~evki~d~~--~ 457 (666)
T PLN02614 386 GNVR---IILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGPPV-PN-VDIRLESVP--E 457 (666)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccCcC-Cc-eEEEEeeec--c
Confidence 4677 5566764 33344555567678999 999999974322111 11 1122344432 32 223334432 1
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCce
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 431 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 431 (579)
. +.. ++.+|+.|||+|.. +.||| ||+|||+++++. ...+.|+||.+|+
T Consensus 458 ~-------~~~-----~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ 521 (666)
T PLN02614 458 M-------EYD-----ALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNI 521 (666)
T ss_pred c-------Ccc-----cCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhc
Confidence 1 112 45679999999966 47887 699999999985 6889999999999
Q ss_pred Eee-ceeecCHHHHHHHHHH
Q 008068 432 LTI-NIDKNTEKDLQLSVDE 450 (579)
Q Consensus 432 i~~-~Gekv~e~~v~~av~~ 450 (579)
|++ +|++|++.+||+++.+
T Consensus 522 ik~~~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 522 FKLSQGEYVAVENIENIYGE 541 (666)
T ss_pred eecCCCeeecHHHHHHHHhc
Confidence 996 6999999999999875
No 57
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.36 E-value=7.5e-12 Score=140.21 Aligned_cols=133 Identities=21% Similarity=0.310 Sum_probs=95.0
Q ss_pred CCceeeEEeecChHHHHHHHHH--HhCCCCeeccccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccc
Q 008068 294 NAKYLSGIMTGSMEHYLKKLRH--YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371 (579)
Q Consensus 294 ~l~~i~~~~~g~~~~~~~~l~~--~~g~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~ 371 (579)
+++ ...+||++.-.+.+.. .. |+++. ++||+||...++..++.. .|.+.
T Consensus 354 ri~---~~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~~~----------------~~~~g-------- 404 (613)
T COG1022 354 RIR---YALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNPPD----------------RFVLG-------- 404 (613)
T ss_pred cEE---EEEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEcccc----------------CcccC--------
Confidence 466 6678886433332332 24 59999 999999976554432211 11121
Q ss_pred cccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCceEee
Q 008068 372 VLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 434 (579)
Q Consensus 372 ~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~ 434 (579)
.-+++++-.|++.++.|||.|.+ +.||| ||+|||++.++. ...+.++||++++++.
T Consensus 405 ---tvG~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l 477 (613)
T COG1022 405 ---TVGKPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKL 477 (613)
T ss_pred ---CcCCcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEEC
Confidence 12466666788889999999987 69999 799999999996 6899999999999776
Q ss_pred -ceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec
Q 008068 435 -NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD 470 (579)
Q Consensus 435 -~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~ 470 (579)
+|++|.+..+|..+.+. --+...+++.+
T Consensus 478 ~~GknIaP~~IE~~l~~~--------~~I~qi~vvg~ 506 (613)
T COG1022 478 SNGKNIAPEPIESKLAKS--------PLIEQICVVGD 506 (613)
T ss_pred CCCcccChHHHHHHHhcC--------CCeeEEEEEec
Confidence 59999999999977642 23445666654
No 58
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.35 E-value=5e-11 Score=133.06 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=90.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecC-CCC--CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPS--LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~-~~~--~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.++++ ++..||. ....+++.+.+ +++++ +.||+||+.+.... +.. ......+..+.|+ ..++.++.+
T Consensus 299 ~~~l~---~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~-~~v~i~d~~- 371 (536)
T PRK10946 299 LASLK---LLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPD-DEVWVADAD- 371 (536)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHhc-CCeEE-EeecccccceeeecCCCccccccccCCcccCCC-ceEEEECCC-
Confidence 46788 6777773 45555666667 58999 99999997544321 110 0011123322222 223333321
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
++ ++..|+.|||+|++ ..||| +|+|||+++.+. ...+.|+||.
T Consensus 372 -----------~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~ 431 (536)
T PRK10946 372 -----------GN-----PLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGRE 431 (536)
T ss_pred -----------CC-----CCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccc
Confidence 22 45689999999966 45665 599999999985 5789999999
Q ss_pred CceEeeceeecCHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+|+++++|+++++.+||.+|.+
T Consensus 432 ~d~i~~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 432 KDQINRGGEKIAAEEIENLLLR 453 (536)
T ss_pred cceeecCCEEEcHHHHHHHHHh
Confidence 9999999999999999999975
No 59
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=3.1e-10 Score=127.18 Aligned_cols=132 Identities=18% Similarity=0.191 Sum_probs=90.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.|+++ ++.+||. ....+++++.+ |++++ +.||+||+...+..... ..++..|..+ .+.-+++++.+
T Consensus 324 ~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~~~~- 395 (560)
T PRK08974 324 FSSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLPV--PSTEIKLVDDD- 395 (560)
T ss_pred cccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCccccCc--CCCEEEEECCC-
Confidence 35677 6666763 44455666666 68999 99999997543322111 1111233322 23345555432
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. ++..|+.|||+|++ ..|+| +|+|||+++.+. ...+.|+||.+
T Consensus 396 -----------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~ 455 (560)
T PRK08974 396 -----------GN-----EVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKK 455 (560)
T ss_pred -----------CC-----CCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEeccc
Confidence 12 45679999999976 35555 399999999975 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|++++.|+++++.+||++|.+.
T Consensus 456 d~i~~~G~~i~~~~IE~~l~~~ 477 (560)
T PRK08974 456 DMILVSGFNVYPNEIEDVVMLH 477 (560)
T ss_pred ceEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 60
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=2.7e-10 Score=127.62 Aligned_cols=131 Identities=18% Similarity=0.169 Sum_probs=90.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ .+..||. ....+++++.+ +++++ +.||+||+...+...+. ..+...|..+ .+.-+++++.+
T Consensus 327 ~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~--~g~~v~i~d~~-- 397 (557)
T PRK07059 327 SKLI---VANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGLPL--PSTEVSIRDDD-- 397 (557)
T ss_pred hhhe---EEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccCcc--CCcEEEEECCC--
Confidence 4566 6666663 45556667767 58999 99999997543322111 1112234322 33445655432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. .+.+|+.|||+|++. .||| +|+|||+++.+. ...+.|+||.+
T Consensus 398 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~ 458 (557)
T PRK07059 398 ----------GN-----DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKK 458 (557)
T ss_pred ----------CC-----CCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccc
Confidence 22 356799999999762 3443 499999999875 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++|++|++.+||+++.+.
T Consensus 459 ~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 459 DMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred cceEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999753
No 61
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.35 E-value=2.5e-10 Score=126.64 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=91.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+|+++ .+.+||. ...++++.+.+ +++++ +.||+||+.......+.. .++..|.. .+ +.-+++++.+
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~i~d~~- 362 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVGKP-VA-GCPVRILDRN- 362 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCcccCC-CC-CcEEEEECCC-
Confidence 46777 6676763 55666777778 47888 999999975432211110 11112222 12 2345555432
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee----------ccccCCEEEEeceeCCCCEEEEEeeeCceE
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 432 (579)
++ ++.+|+.|||+|++ ..||+ +|+|||+++.+. ...+.++||.+|++
T Consensus 363 -----------~~-----~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i 422 (516)
T PRK13383 363 -----------NR-----PVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMI 422 (516)
T ss_pred -----------CC-----CCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceE
Confidence 12 34679999999976 35565 688999999985 57899999999999
Q ss_pred eeceeecCHHHHHHHHHH
Q 008068 433 TINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 433 ~~~Gekv~e~~v~~av~~ 450 (579)
+++|++|++.+|+.+|.+
T Consensus 423 ~~~G~~v~~~eiE~~l~~ 440 (516)
T PRK13383 423 ISGGENVYPRAVENALAA 440 (516)
T ss_pred EECCEEECHHHHHHHHHh
Confidence 999999999999999975
No 62
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.35 E-value=1.3e-10 Score=129.15 Aligned_cols=132 Identities=16% Similarity=0.096 Sum_probs=88.0
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----------CCCcccccceecCCceE
Q 008068 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----------SLPPELATFAVLPNIGY 357 (579)
Q Consensus 291 lwP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~----------~~~~~~~~~~l~~~~~~ 357 (579)
..++++ .+.+||. .....++.+.+ +.++. +.||+||+...+...+ ....+..|.. .+ +.-
T Consensus 278 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~-g~~ 350 (528)
T PRK07470 278 DHSSLR---YVIYAGAPMYRADQKRALAKL-GKVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFE-RT-GME 350 (528)
T ss_pred CCcceE---EEEEcCCCCCHHHHHHHHHHh-CcHHH-HhCCCcccCCceeecchhhccccccccceeeccCcc-cC-CcE
Confidence 356788 6666663 44455566667 47788 9999999643221111 0001111221 11 223
Q ss_pred EEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCE
Q 008068 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 358 ~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~ 421 (579)
+++++.+ +. ++..|+.|||+|++ ..||| +|+|||+++++. .+.
T Consensus 351 ~~i~d~~------------~~-----~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~ 409 (528)
T PRK07470 351 VQIQDDE------------GR-----ELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGF 409 (528)
T ss_pred EEEECCC------------CC-----CCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCe
Confidence 3444332 22 45679999999976 35555 499999999885 678
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+.+.||.+|++++.|++|++.+||++|.+
T Consensus 410 l~~~GR~dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 410 LYITGRASDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred EEEeCCccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999999999975
No 63
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.34 E-value=5.1e-11 Score=127.13 Aligned_cols=132 Identities=17% Similarity=0.234 Sum_probs=89.8
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceec---CCCCCC----cccccceecCCceEEEEE
Q 008068 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN---VNPSLP----PELATFAVLPNIGYFEFI 361 (579)
Q Consensus 292 wP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~---~~~~~~----~~~~~~~l~~~~~~~Efi 361 (579)
.++++ .+..|| .....+.+++.++++++. ..||+||+...+. ...... +...|.. .+ +....++
T Consensus 233 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~i~ 306 (408)
T TIGR01733 233 LASLR---LVILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGRP-LA-NTRLYVL 306 (408)
T ss_pred ccCce---EEEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCcc-cC-CceEEEE
Confidence 45788 555555 366667788888668998 9999999743221 111111 0011211 12 2223333
Q ss_pred eCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee----------------------ccccCCEEEEecee
Q 008068 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------------------RYRLGDVVKVMGFH 416 (579)
Q Consensus 362 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~----------------------RYr~GDvv~v~~~~ 416 (579)
+++ .+ .+..|+.|||+|++ ..|+| +|+|||++.++.
T Consensus 307 ~~~------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~-- 367 (408)
T TIGR01733 307 DDD------------LR-----PVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP-- 367 (408)
T ss_pred CCC------------CC-----CCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC--
Confidence 321 12 45679999999987 34454 699999999985
Q ss_pred CCCCEEEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 417 NSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 417 ~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
..++.|+||.+|+++++|+++++.+||+++..
T Consensus 368 --~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 368 --DGNLEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred --CCCEEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 56899999999999999999999999999974
No 64
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.34 E-value=4.7e-10 Score=125.25 Aligned_cols=129 Identities=14% Similarity=0.165 Sum_probs=86.5
Q ss_pred CCceeeEEeecC-hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCccccc
Q 008068 294 NAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372 (579)
Q Consensus 294 ~l~~i~~~~~g~-~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~ 372 (579)
.++ ++.+|. ......++.+.+ |++++ +.||+||+.+.+...+..+++..+.. .++ ++++..+ .
T Consensus 268 ~lr---~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~~-~~~---~~i~~~~--~----- 331 (529)
T PRK07867 268 PLR---IVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGPL-PPG---VAIVDPD--T----- 331 (529)
T ss_pred ceE---EEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCCC-CCC---EEEEECC--C-----
Confidence 466 334333 344455666677 58999 99999997544332222222223332 222 6666543 1
Q ss_pred ccCCCccccccccCCCc------------eEEEEE-cc---cccee-------------ccccCCEEEEeceeCCCCEEE
Q 008068 373 LCIEPKPVGLTEVKVGE------------EYEIIV-TN---VAGLY-------------RYRLGDVVKVMGFHNSTPELK 423 (579)
Q Consensus 373 ~~~~~~~l~~~eve~G~------------~yeLVv-Tt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~ 423 (579)
+. ++..|+ .|||++ .. +.||| ||+|||+++++. ...+.
T Consensus 332 ----~~-----~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~ 398 (529)
T PRK07867 332 ----GT-----ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAY 398 (529)
T ss_pred ----CC-----CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEE
Confidence 11 123344 899998 44 46666 899999999975 57899
Q ss_pred EEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 424 FICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 424 f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+||.+|+++++|+||++.+||+++.+.
T Consensus 399 ~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 426 (529)
T PRK07867 399 FAGRLGDWMRVDGENLGTAPIERILLRY 426 (529)
T ss_pred EeccccCeEEECCEEeCHHHHHHHHHhC
Confidence 9999999999999999999999999853
No 65
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.34 E-value=5.8e-11 Score=137.11 Aligned_cols=134 Identities=13% Similarity=0.151 Sum_probs=87.8
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-C-CCCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P-SLPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~-~~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++++ .+.+||+ ....+.++..+ |++++ ++||+||+..+.... + ....+..|..+ .+.-+.+++.+ +
T Consensus 420 ~~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~p~--p~~evkivd~~--~ 490 (696)
T PLN02387 420 GRIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGPPL--PCCYVKLVSWE--E 490 (696)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCCCC--CceEEEEeecc--c
Confidence 4677 6777774 33333344456 68999 999999975332211 1 11122233322 23345556543 1
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee------------------ccccCCEEEEeceeCCCCEEEEEe
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------RYRLGDVVKVMGFHNSTPELKFIC 426 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~------------------RYr~GDvv~v~~~~~~~P~i~f~g 426 (579)
.+ ..+. -.++..|||+|.. +.||| ||+|||+++++. .+.+.|+|
T Consensus 491 ~~--------~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~g 555 (696)
T PLN02387 491 GG--------YLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIID 555 (696)
T ss_pred cC--------cccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEE
Confidence 11 1111 1234568999966 57776 799999999985 68999999
Q ss_pred eeCceEee-ceeecCHHHHHHHHHH
Q 008068 427 RRNLLLTI-NIDKNTEKDLQLSVDE 450 (579)
Q Consensus 427 R~~d~i~~-~Gekv~e~~v~~av~~ 450 (579)
|.+|++++ +||+|++.+||+++.+
T Consensus 556 R~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 556 RKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred cccceEECCCCeEEchHHHHHHHhc
Confidence 99999998 6999999999999875
No 66
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.33 E-value=2.9e-10 Score=126.43 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=90.1
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ ++.+||. ....+++++.+ +++++ +.||+||+.+....... ...+..|..+.+ ....++++.+
T Consensus 299 ~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~-~~~v~i~d~~-- 370 (527)
T TIGR02275 299 SSLK---LLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSP-DDEVRVVDDH-- 370 (527)
T ss_pred cceE---EEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccCCCCccccccccCCCCCCC-CceEEEECCC--
Confidence 5677 6777773 55556677777 58998 99999997543221010 001113333211 2234444332
Q ss_pred CcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
++ .++.|+.|||+|++ ..||| +|+|||+++++. .+++.++||.+
T Consensus 371 ----------g~-----~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~ 431 (527)
T TIGR02275 371 ----------GN-----PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAK 431 (527)
T ss_pred ----------CC-----CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEeccc
Confidence 22 34679999999975 35555 599999999975 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++|++|++.+||++|.+.
T Consensus 432 d~i~~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 432 DQINRGGEKIAAEEIENLLLAH 453 (527)
T ss_pred ceeecCCEEECHHHHHHHHHhC
Confidence 9999999999999999998753
No 67
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.33 E-value=4.6e-10 Score=125.32 Aligned_cols=132 Identities=9% Similarity=0.032 Sum_probs=82.8
Q ss_pred ccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHH
Q 008068 384 EVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 447 (579)
Q Consensus 384 eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~a 447 (579)
.+++|+.|||++++. .|+| +|+|||+++.+. ...+.|+||.+|+++++|+++++.+||++
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 356799999999763 4555 599999999975 57899999999999999999999999999
Q ss_pred HHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEec
Q 008068 448 VDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVL 527 (579)
Q Consensus 448 v~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~~~l~p~~v~~v~ 527 (579)
|.+... + ..+.+.-+.. .+.. ..-...+++|.....+...+..+...+.+.+ +..-...|-.|.+++
T Consensus 456 l~~~~~-v--~~~~vv~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l--------~~~~~~~p~~v~~v~ 522 (545)
T PRK07768 456 AARVEG-V--RPGNAVAVRL-DAGH-SREGFAVAVESNAFEDPAEVRRIRHQVAHEV--------VAEVGVRPRNVVVLG 522 (545)
T ss_pred HHhCcc-c--ccceEEEEEe-cCCC-CceEEEEEEEecccccHHHHHHHHHHHHHHH--------HHHhCCCccEEEEeC
Confidence 986421 1 1111111111 1111 1124567777643333333334444443332 111125677788888
Q ss_pred cchHH
Q 008068 528 KGTFQ 532 (579)
Q Consensus 528 ~gtf~ 532 (579)
.+.|.
T Consensus 523 ~~~lP 527 (545)
T PRK07768 523 PGSIP 527 (545)
T ss_pred CCcCC
Confidence 76654
No 68
>PRK08315 AMP-binding domain protein; Validated
Probab=99.33 E-value=3.9e-10 Score=126.03 Aligned_cols=134 Identities=10% Similarity=0.073 Sum_probs=90.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-----CcccccceecCCceEEEEEeC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-----PPELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~-----~~~~~~~~l~~~~~~~Efip~ 363 (579)
.++++ +++.||. ....+.+.+.++..+++ +.||+||+...+...... .....|..+ + +..++.++.
T Consensus 314 ~~~lr---~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~-~-~~~v~i~d~ 387 (559)
T PRK08315 314 LSSLR---TGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGRAL-P-HLEVKIVDP 387 (559)
T ss_pred chhhh---eeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCccC-C-CcEEEEEcC
Confidence 46777 6565652 44556677777655688 999999985432211110 011123322 2 344555554
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEEe
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 426 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~g 426 (579)
+ +++ .+..|+.|||+|.+. .||| +|+|||+++.+. ...+.|+|
T Consensus 388 ~-----------~~~-----~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~G 447 (559)
T PRK08315 388 E-----------TGE-----TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVG 447 (559)
T ss_pred c-----------cCC-----cCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEe
Confidence 3 122 346799999999663 4444 699999999875 57899999
Q ss_pred eeCceEeeceeecCHHHHHHHHHHH
Q 008068 427 RRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 427 R~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|.++++++.|+++++.+||+++.+.
T Consensus 448 R~d~~i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 448 RIKDMIIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred eccceEEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999999753
No 69
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.33 E-value=9.6e-11 Score=131.18 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=90.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++++ .+.+||. ....+++++.+ +++++ +.||+||+...+...+.. .++..|.. ..+.-+.+++.+
T Consensus 328 l~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~--~~~~~v~i~d~~- 399 (560)
T PRK08751 328 FSSLK---MTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGLP--IPSTDACIKDDA- 399 (560)
T ss_pred hhhhe---eeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCcc--CCCceEEEECCC-
Confidence 45778 6666763 45556677777 58888 999999975433321110 01112221 122333334321
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+. +++.|+.|||+|++. .||| +|+|||+++++. ...+.++||.
T Consensus 400 -----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~ 459 (560)
T PRK08751 400 -----------GT-----VLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRK 459 (560)
T ss_pred -----------CC-----CCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeec
Confidence 22 456789999999773 4554 499999999985 6789999999
Q ss_pred CceEeeceeecCHHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+++++|++|++.+||+++.+.
T Consensus 460 ~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 460 KDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred hhheeECCEEEcHHHHHHHHHhC
Confidence 99999999999999999999754
No 70
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.33 E-value=1.3e-10 Score=142.64 Aligned_cols=131 Identities=16% Similarity=0.286 Sum_probs=89.8
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC---------cccccceecCCceEEEE
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---------PELATFAVLPNIGYFEF 360 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~---------~~~~~~~l~~~~~~~Ef 360 (579)
++++ .++.||. ....+++++.+ +++++ +.||+||+.+.+...+.++ ....|..+ ++. -+..
T Consensus 717 ~~lr---~i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~-~~~i 789 (1296)
T PRK10252 717 ASLR---QVFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPV-WNT-GLRI 789 (1296)
T ss_pred CCcc---EEEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccccc-CCC-EEEE
Confidence 5688 6666662 55556666666 68899 9999999754332211111 00123322 222 2223
Q ss_pred EeCCCCCcccccccCCCccccccccCCCceEEEEEccc---ccee--------------------ccccCCEEEEeceeC
Q 008068 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------------RYRLGDVVKVMGFHN 417 (579)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------------RYr~GDvv~v~~~~~ 417 (579)
++.+ .+ .+..|+.|||+|+.. .||+ +|+|||+++.+.
T Consensus 790 ~d~~------------~~-----~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~--- 849 (1296)
T PRK10252 790 LDAR------------MR-----PVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD--- 849 (1296)
T ss_pred ECCC------------CC-----CCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC---
Confidence 3321 22 456899999999873 4554 499999999985
Q ss_pred CCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 418 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
...+.|+||.+++++++|++|...+||.+|.+.
T Consensus 850 -~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 850 -DGAVEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred -CCcEEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 689999999999999999999999999999864
No 71
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.32 E-value=4.6e-10 Score=123.22 Aligned_cols=131 Identities=11% Similarity=0.160 Sum_probs=88.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCC---CCcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~ 364 (579)
++.++ .+..||. +...+.+++. ++++. +.||+||+.. ....... ...+..|.. .+ +.-+++++.+
T Consensus 263 ~~~lr---~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p-~~-~~~~~i~d~~ 334 (496)
T PRK06839 263 LQSVR---WFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGKP-VL-FCDYELIDEN 334 (496)
T ss_pred Ccccc---eEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCccc-CC-CceEEEECCC
Confidence 45677 6666763 4555556654 58888 9999999753 2221111 111112322 12 2234444433
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+. ++..|+.|||+|++. .||| +|+|||+++.+. ...+.|+||.
T Consensus 335 ------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~ 393 (496)
T PRK06839 335 ------------KN-----KVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRK 393 (496)
T ss_pred ------------cC-----CCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccc
Confidence 12 357899999999774 3554 499999999975 5789999999
Q ss_pred CceEeeceeecCHHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+++..|++|++.+||+++.+.
T Consensus 394 ~d~i~~~G~~v~p~~iE~~l~~~ 416 (496)
T PRK06839 394 KEMIISGGENIYPLEVEQVINKL 416 (496)
T ss_pred cceEEECCEEECHHHHHHHHHhC
Confidence 99999999999999999999753
No 72
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.32 E-value=1.5e-10 Score=128.60 Aligned_cols=133 Identities=14% Similarity=0.172 Sum_probs=96.3
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCccc--ceecCCCCC-CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGW--IGANVNPSL-PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~--i~~~~~~~~-~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.|+++ .+.+|| ..+..+++++.+|...+. .+||+||.. +.++.+... .++..|..+ + + .+.+-.+
T Consensus 298 l~sl~---~v~~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~~-~-g--~~~~v~~- 368 (537)
T KOG1176|consen 298 LSSLR---SVLSGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRLL-P-G--VRVKVLD- 368 (537)
T ss_pred CCccE---EEEecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCccc-c-c--eEEEeeC-
Confidence 46677 554444 366777788889757777 999999974 355544442 344456543 2 2 2222222
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+ .+. ++.+++.|||++.+ ..||| ||+|||++-++. ...+.|++|.
T Consensus 369 -e--------~g~-----~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~----DG~l~IvdR~ 430 (537)
T KOG1176|consen 369 -E--------TGV-----SLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDE----DGYLYIVDRS 430 (537)
T ss_pred -C--------CCC-----CCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcC----CCeEEEecch
Confidence 1 223 45678999999955 58888 799999998885 7999999999
Q ss_pred CceEeeceeecCHHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+|+.+|++|++.|||++|.+.
T Consensus 431 KdlIk~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 431 KDLIKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred hhheeeCCEEeCHHHHHHHHHhC
Confidence 99999999999999999999864
No 73
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.31 E-value=6.6e-10 Score=127.42 Aligned_cols=223 Identities=15% Similarity=0.144 Sum_probs=123.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceec-CCCCCC--cccccceecCCceEEEEEeCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGAN-VNPSLP--PELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g-~v~v~~~~YgaSEg~i~~~-~~~~~~--~~~~~~~l~~~~~~~Efip~~~ 365 (579)
++|+ .+.+||. ....+.+.+.++ ++.+. ..||+||....+. ..+..+ .+..+.. .++ +|..-.+
T Consensus 384 ~sLr---~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g---~~v~ivd- 454 (652)
T TIGR01217 384 SALQ---CVASTGSPLPPDGFRWVYDEIKADVWLA-SISGGTDICSCFAGANPTLPVHIGEIQAP-GLG---TAVQSWD- 454 (652)
T ss_pred hhee---EEEeecCCCCHHHHHHHHHHhCCCceEE-eccCHHHHhccccCCCCCCCCcCCccCCC-cCC---CceEEEC-
Confidence 5677 6677773 444455556564 35555 8899999532211 111111 1111111 121 2222222
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc-----ccee------c------------cccCCEEEEeceeCCCCEE
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY------R------------YRLGDVVKVMGFHNSTPEL 422 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~------R------------Yr~GDvv~v~~~~~~~P~i 422 (579)
+ ++. ++ +|+.|||+|+.. .||| + |+|||+++++. .+.+
T Consensus 455 -~--------~g~-----~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l 515 (652)
T TIGR01217 455 -P--------EGK-----PV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGI 515 (652)
T ss_pred -C--------CCC-----CC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcE
Confidence 1 123 23 489999999762 4555 1 78999999985 6899
Q ss_pred EEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEee-cCCCCCceEEEEEEeccC--CCHHHHHHHHHH
Q 008068 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHV-DLSTDPGHYVIFWEVSGE--VNDEVLKECCNC 499 (579)
Q Consensus 423 ~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~-~~~~~~~~y~~~vE~~~~--~~~~~l~~~~~~ 499 (579)
.|+||.+|+|+++|++|++.|||++|.+.. + +.+-.++. +.....-.-+.||.+..+ .+++..+++.+.
T Consensus 516 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p------~--V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~ 587 (652)
T TIGR01217 516 VIHGRSDSTLNPQGVRMGSAEIYNAVERLD------E--VRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRT 587 (652)
T ss_pred EEEecccCeEecCCEEcCHHHHHHHHHhCC------C--cceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999998642 2 22333322 111111233467776433 222222334334
Q ss_pred HHHhccChhhHHHhhcCCcCCeEEEEec------cchHHH-HHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 008068 500 LDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQ-ILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (579)
Q Consensus 500 ld~~L~n~~Y~~~R~~~~l~p~~v~~v~------~gtf~~-~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (579)
+.+.| ...-.|-.|.+|+ .|-..+ .++. +..| ..++.+--+. |++.++.+.+
T Consensus 588 ~~~~l----------~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~-~~~~---~~~~~~~~~~--~~~~l~~~~~ 646 (652)
T TIGR01217 588 IRAGL----------SPRHVPDEIIEVPGIPHTLTGKRVEVAVKR-VLQG---TPVDNPGAID--NPELLDLYEE 646 (652)
T ss_pred HHhhC----------CCCcCCCEEEECCCCCCCCCccChHHHHHH-HHcC---CCCCCccccc--CHHHHHHHHH
Confidence 43333 1123455677654 232221 2221 1233 3456677788 8999888754
No 74
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.31 E-value=2.4e-10 Score=125.24 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=87.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CcccccceecCCceEEEEEeCCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~--~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
.++++ .+.+||. ....+++++.+ +++++ +.||+||+.+.+...... .++..|..+ + +.-..+++.+
T Consensus 240 l~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~~-~-g~~~~i~d~~-- 310 (471)
T PRK07787 240 LRGAR---LLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGLPL-A-GVETRLVDED-- 310 (471)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCcccccC-C-CcEEEEECCC--
Confidence 35677 6666763 45566777777 58999 999999986543211111 111123322 2 2333444332
Q ss_pred CcccccccCCCccccccccCCCc-eEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGE-EYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~-~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+.++. ..|+ .|||+|++ ..||| +|+|||++.++. ...+.++||.
T Consensus 311 ----------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~GR~ 372 (471)
T PRK07787 311 ----------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIVGRE 372 (471)
T ss_pred ----------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEeCCC
Confidence 12221 1343 79999987 35666 599999999974 6789999996
Q ss_pred -CceEeeceeecCHHHHHHHHHH
Q 008068 429 -NLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 429 -~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+++++++|++|++.+||++|.+
T Consensus 373 ~d~~i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 373 STDLIKSGGYRIGAGEIETALLG 395 (471)
T ss_pred CceeEeeCCEEECHHHHHHHHHh
Confidence 8999999999999999999975
No 75
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.31 E-value=3.9e-11 Score=148.45 Aligned_cols=135 Identities=16% Similarity=0.179 Sum_probs=89.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCC-c---------ccccceecCCc
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLP-P---------ELATFAVLPNI 355 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~---~~~-~---------~~~~~~l~~~~ 355 (579)
+|+|+ .+..||. .....++++++++++++ +.||+||+.+.+.... ... . ...|.. .++.
T Consensus 528 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~~ 602 (1389)
T TIGR03443 528 IPSLH---HAFFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKG-MKNV 602 (1389)
T ss_pred CCCcc---EEEEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEccccccccchhhcccCcCcCCCc-cCCC
Confidence 57788 5555552 44555677777789999 9999999854332110 000 0 001111 1111
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee------------------------------
Q 008068 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------------------ 402 (579)
Q Consensus 356 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~------------------------------ 402 (579)
-+-+++.+ + ... .+..|+.|||+|.. ..|||
T Consensus 603 -~~~ivd~~----~------~~~-----~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~ 666 (1389)
T TIGR03443 603 -QLLVVNRN----D------RTQ-----TCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNK 666 (1389)
T ss_pred -EEEEECCc----c------CCC-----cCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCccccccccccccc
Confidence 11222221 0 112 35679999999966 35655
Q ss_pred ------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 403 ------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 403 ------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+|||+++... ...+.|+||.+|+|+++|++|.+.+||.+|.+.
T Consensus 667 ~~~~~~~~~~~~~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~ 723 (1389)
T TIGR03443 667 PEREFWLGPRDRLYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQH 723 (1389)
T ss_pred ccccccCCCccceeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHhC
Confidence 599999999985 689999999999999999999999999999863
No 76
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.31 E-value=3.1e-10 Score=131.45 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=81.8
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++|+ .+.+||. ....+.+++.+ |++++ +.||+||+...+.... ...++..|..+ |+. -...++.+
T Consensus 479 ~~lr---~i~~gg~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p~-pg~-~~~i~d~~--- 548 (718)
T PRK08043 479 ARLR---YVVAGAEKLQESTKQLWQDKF-GLRIL-EGYGVTECAPVVSINVPMAAKPGTVGRIL-PGM-DARLLSVP--- 548 (718)
T ss_pred cceE---EEEEeCccCCHHHHHHHHHHc-CCCee-cccCcccccceEEecCCcccCCCCCCCcC-CCC-eeEEecCC---
Confidence 5788 6677763 44556667777 58999 9999999743221111 11122233321 221 22233221
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee-----------------------ccccCCEEEEeceeCCCCE
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------------RYr~GDvv~v~~~~~~~P~ 421 (579)
..|+.|||.+.+ ..||| +|+|||+++++. .+.
T Consensus 549 ------------------~~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~ 606 (718)
T PRK08043 549 ------------------GIEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDE----QGF 606 (718)
T ss_pred ------------------CCCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcC----CCc
Confidence 013346666643 12332 599999999985 678
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+.|+||.+|+|++.|++|++.+||+++.+.
T Consensus 607 l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 607 VQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred EEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 999999999999999999999999998764
No 77
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.30 E-value=3.8e-10 Score=126.13 Aligned_cols=129 Identities=16% Similarity=0.186 Sum_probs=88.7
Q ss_pred EEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCC-CCC-----CcccccceecCCceEEEEEeCCCCCcc
Q 008068 300 GIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVN-PSL-----PPELATFAVLPNIGYFEFIPQRLGNLE 369 (579)
Q Consensus 300 ~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~-~~~-----~~~~~~~~l~~~~~~~Efip~~~~~~~ 369 (579)
.+.+||. ...++++++.|++++++ +.||+||+.+ ++... +.. .....|..+ + +.-+++++.+ .
T Consensus 307 ~i~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~-~-~~~v~i~d~~--~-- 379 (546)
T PLN02330 307 AIMTAAAPLAPELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFIL-P-NLEVKFIDPD--T-- 379 (546)
T ss_pred eEEEcCCcCCHHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccccc-C-CcEEEEEeCC--C--
Confidence 5555652 56667777878789999 9999999743 32211 110 011123322 2 2235556543 1
Q ss_pred cccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCceE
Q 008068 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (579)
Q Consensus 370 ~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 432 (579)
+. .+++|+.|||+|++ ..||| +|+|||+++++. ...+.|.||.+|++
T Consensus 380 -------~~-----~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d~i 443 (546)
T PLN02330 380 -------GR-----SLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKELI 443 (546)
T ss_pred -------Cc-----cCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHHhh
Confidence 12 35679999999975 34554 499999999985 57899999999999
Q ss_pred eeceeecCHHHHHHHHHHH
Q 008068 433 TINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 433 ~~~Gekv~e~~v~~av~~~ 451 (579)
+++|++|++.+||.++.+.
T Consensus 444 ~~~G~~v~~~~iE~~l~~~ 462 (546)
T PLN02330 444 KYKGFQVAPAELEAILLTH 462 (546)
T ss_pred hcCCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 78
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.30 E-value=7.2e-10 Score=124.01 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCcccc---cccCCCcccccc
Q 008068 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ---VLCIEPKPVGLT 383 (579)
Q Consensus 307 ~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~---~~~~~~~~l~~~ 383 (579)
....+++.+.+ +++++ +.||+||+...+...+..+++..|..+ ++ ++++..+ ..... .-++++..+
T Consensus 277 ~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~--~~~~~~~~~~d~~g~~~--- 345 (540)
T PRK13388 277 PRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPE--TLTECAVARFDAHGALL--- 345 (540)
T ss_pred HHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCC--CCccccceeccCccccc---
Confidence 44556666777 58999 999999985433222222233344433 33 3444332 10000 000111111
Q ss_pred ccCCCceEEEEEc-c---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHH
Q 008068 384 EVKVGEEYEIIVT-N---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 446 (579)
Q Consensus 384 eve~G~~yeLVvT-t---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~ 446 (579)
...|+.|||+++ + +.||| +|+|||+++.+. ...+.++||.+|+++++|++|++.+||.
T Consensus 346 -~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eIE~ 420 (540)
T PRK13388 346 -NADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPIER 420 (540)
T ss_pred -cCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHHHH
Confidence 134678999997 4 35666 699999999985 5789999999999999999999999999
Q ss_pred HHHH
Q 008068 447 SVDE 450 (579)
Q Consensus 447 av~~ 450 (579)
++.+
T Consensus 421 ~l~~ 424 (540)
T PRK13388 421 ILLR 424 (540)
T ss_pred HHHh
Confidence 8875
No 79
>PRK12467 peptide synthase; Provisional
Probab=99.30 E-value=3.7e-11 Score=160.72 Aligned_cols=133 Identities=13% Similarity=0.147 Sum_probs=91.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CC----CcccccceecCCceEEEEE
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SL----PPELATFAVLPNIGYFEFI 361 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~---~~----~~~~~~~~l~~~~~~~Efi 361 (579)
.|+|+ .++.||. ....+++.+.++++.++ +.||+||+.+...... .. .....|.. .++. ++.
T Consensus 3350 ~~~lr---~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~---~~~ 3421 (3956)
T PRK12467 3350 CASLD---IYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRP-VAGR---SIY 3421 (3956)
T ss_pred CCCce---EEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCccc-cCCC---EEE
Confidence 46788 6677773 44556666667778899 9999999865432111 10 00112332 2222 221
Q ss_pred eCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEeceeC
Q 008068 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHN 417 (579)
Q Consensus 362 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~ 417 (579)
-.+ + +++ .+.+|+.|||+|.. ..||| +|||||+++...
T Consensus 3422 v~d--~--------~~~-----~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~--- 3483 (3956)
T PRK12467 3422 VLD--G--------QLN-----PVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA--- 3483 (3956)
T ss_pred EEC--C--------CCC-----CCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC---
Confidence 222 1 123 45789999999976 36665 299999999985
Q ss_pred CCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 418 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.++|+||.+++++++|.+|...|||++|.+.
T Consensus 3484 -dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3484 -DGVIEYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred -CCcEEEeccccceEeeceEeecHHHHHHHHhhC
Confidence 689999999999999999999999999999763
No 80
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.29 E-value=6.2e-10 Score=123.07 Aligned_cols=130 Identities=13% Similarity=0.076 Sum_probs=90.8
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ .+++|| ....++++++.+ +++++ +.||+||+......... ..++..|..+ + +.-+++++.+
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~d~~-- 341 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGKAA-P-GAELRFVDED-- 341 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCccC-C-CcEEEEECCC--
Confidence 5677 666666 266677788878 57888 99999997542211111 1122234322 2 2335555432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEccc----ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV----AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~----~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
++ ++..|+.|||++++. .|+| +|+|||+++.+. ...+.++||.+
T Consensus 342 ----------~~-----~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~ 402 (509)
T PRK12406 342 ----------GR-----PLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKR 402 (509)
T ss_pred ----------CC-----CCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeeccc
Confidence 12 456799999999763 2555 599999999985 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~ 450 (579)
|+++++|++|++.+||++|.+
T Consensus 403 d~ik~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 403 DMVISGGVNIYPAEIEAVLHA 423 (509)
T ss_pred ceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 81
>PRK12467 peptide synthase; Provisional
Probab=99.29 E-value=1.7e-10 Score=154.37 Aligned_cols=131 Identities=16% Similarity=0.222 Sum_probs=89.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCCc---ccccceecCCceEEEEEeC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLPP---ELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~---~~~~---~~~~~~l~~~~~~~Efip~ 363 (579)
++++ .+++||. ....+++.+.+++++++ +.||+||+.+.+.... .... ...|.. .++. -+..++.
T Consensus 771 ~~lr---~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~-~~~i~d~ 844 (3956)
T PRK12467 771 RPQR---ALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQP-LANL-GLYILDH 844 (3956)
T ss_pred Cccc---EEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccCC-cCCC-EEEEECC
Confidence 4567 6666662 45556666666678999 9999999855332111 1000 012222 2232 2233332
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEeceeCCC
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNST 419 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~~~ 419 (579)
+ .. .+..|+.|||+|+. ..||| +|||||+++.+. .
T Consensus 845 ~------------~~-----~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----d 903 (3956)
T PRK12467 845 Y------------LN-----PVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA----D 903 (3956)
T ss_pred C------------CC-----CCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC----C
Confidence 1 12 45789999999976 35554 499999999985 6
Q ss_pred CEEEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 420 PELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 420 P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+.+.|+||.+++++++|++|.+.+||.+|.+
T Consensus 904 G~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 904 GVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred CcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 8899999999999999999999999999975
No 82
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.28 E-value=4.6e-11 Score=137.14 Aligned_cols=133 Identities=11% Similarity=0.129 Sum_probs=85.2
Q ss_pred CCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCC--CcccccceecCCceEEEEEeCCCCCc
Q 008068 294 NAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRLGNL 368 (579)
Q Consensus 294 ~l~~i~~~~~g~~--~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~~--~~~~~~~~l~~~~~~~Efip~~~~~~ 368 (579)
+++ .+.+||+ ..-..++.+.++.++++ ++||+||+..++... +.. ..+..|..+ |+ .-+-+++.+ +.
T Consensus 384 ~lr---~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~-p~-~ev~i~d~~--~~ 455 (660)
T PLN02861 384 RVR---LLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGVPM-TT-IEARLESVP--EM 455 (660)
T ss_pred cEE---EEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccCcc-Cc-eEEEEEEcc--cc
Confidence 577 6677774 22233444556545778 999999974322211 111 122234432 22 222333322 11
Q ss_pred ccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceE
Q 008068 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (579)
Q Consensus 369 ~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 432 (579)
+ .. .+..+..|||+|.. +.||| +|+|||+++++. ...+.|+||.+|+|
T Consensus 456 g-------~~-----~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~I 519 (660)
T PLN02861 456 G-------YD-----ALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIF 519 (660)
T ss_pred C-------cc-----cCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccce
Confidence 1 01 22346678999966 57888 599999999985 68999999999999
Q ss_pred ee-ceeecCHHHHHHHHHH
Q 008068 433 TI-NIDKNTEKDLQLSVDE 450 (579)
Q Consensus 433 ~~-~Gekv~e~~v~~av~~ 450 (579)
++ +|++|++.+||+++.+
T Consensus 520 k~~~G~~I~p~eIE~~l~~ 538 (660)
T PLN02861 520 KLSQGEYVAVENLENTYSR 538 (660)
T ss_pred EcCCCeEEcHHHHHHHHhc
Confidence 97 7999999999999875
No 83
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.28 E-value=3e-10 Score=127.04 Aligned_cols=136 Identities=9% Similarity=0.017 Sum_probs=87.3
Q ss_pred CCCCceeeEEeecChH---HHHHHHHHHhCCCCeeccccccCcccce-ecCCCCC------CcccccceecCCceEEEEE
Q 008068 292 FPNAKYLSGIMTGSME---HYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSL------PPELATFAVLPNIGYFEFI 361 (579)
Q Consensus 292 wP~l~~i~~~~~g~~~---~~~~~l~~~~g~v~v~~~~YgaSEg~i~-~~~~~~~------~~~~~~~~l~~~~~~~Efi 361 (579)
.|+++ .+.+||.. ...+ ..+.+ ++++. +.||+||+.+. +...... .++..|.. .++ .-+.++
T Consensus 285 ~~~lr---~~~~gG~~~~~~~~~-~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~g-~~v~i~ 356 (540)
T PRK05857 285 VPSLR---LVGYGGSRAIAADVR-FIEAT-GVRTA-QVYGLSETGCTALCLPTDDGSIVKIEAGAVGRP-YPG-VDVYLA 356 (540)
T ss_pred Cccce---EEEEcCccCCchhHH-HHHHh-CCeee-cccCCCcCCceeeecccccccccccccCCcCcc-cCC-cEEEEE
Confidence 56788 56666642 2222 23345 58998 99999997432 2211100 11122332 222 223333
Q ss_pred eCCCCCcccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEE
Q 008068 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFI 425 (579)
Q Consensus 362 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~ 425 (579)
+.+ + ...+....++.|+.|||+|++. .||| +|+|||+++.+. ...+.|+
T Consensus 357 d~~----~-------~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~----~g~l~~~ 421 (540)
T PRK05857 357 ATD----G-------IGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE----DGFFYIK 421 (540)
T ss_pred Ccc----c-------cCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC----CceEEEe
Confidence 322 1 1122222446688999999873 5666 699999999975 6789999
Q ss_pred eeeCceEeeceeecCHHHHHHHHHH
Q 008068 426 CRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 426 gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
||.+|+++++|++|++.+||.++..
T Consensus 422 GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 422 GRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred ccccccEecCCEEECHHHHHHHHHh
Confidence 9999999999999999999999975
No 84
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.28 E-value=1.1e-09 Score=120.95 Aligned_cols=131 Identities=10% Similarity=0.020 Sum_probs=88.4
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~--~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
.+++ .+.+|| .....+.+++.+ +++++ +.||+||........... ..+..|.. . .+.-+++++.+
T Consensus 278 ~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~-~g~~v~i~d~~--- 347 (508)
T TIGR02262 278 VRLR---LCTSAGEALPAEVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGKP-V-PGYRLRLVGDG--- 347 (508)
T ss_pred ccce---eEEEcCCCCCHHHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcCCC-C-CCcEEEEECCC---
Confidence 3566 445555 255556677778 58888 999999974322111111 11112221 1 22335555522
Q ss_pred cccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCce
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 431 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 431 (579)
+. .+.+|+.|||+|++. .||| +|+|||+++... ...+.|+||.+|+
T Consensus 348 ---------~~-----~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~ 409 (508)
T TIGR02262 348 ---------GQ-----DVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDM 409 (508)
T ss_pred ---------CC-----CCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccce
Confidence 22 346799999999873 4554 689999999874 5689999999999
Q ss_pred EeeceeecCHHHHHHHHHHH
Q 008068 432 LTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 432 i~~~Gekv~e~~v~~av~~~ 451 (579)
+++.|+++++.+|++++.+.
T Consensus 410 i~~~G~~v~~~~ie~~l~~~ 429 (508)
T TIGR02262 410 LKVSGIYVSPFEIESALIQH 429 (508)
T ss_pred eeeCCEEECHHHHHHHHHhC
Confidence 99999999999999999753
No 85
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.28 E-value=5.2e-10 Score=124.13 Aligned_cols=131 Identities=15% Similarity=0.107 Sum_probs=87.4
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-C-------CcccccceecCCceEEEE
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-L-------PPELATFAVLPNIGYFEF 360 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~-~-------~~~~~~~~l~~~~~~~Ef 360 (579)
.++++ .+..||. ......+.+.++ +++. +.||+||+..++..... . .....|.. .+ +.-+++
T Consensus 280 l~~lr---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p-~~-g~~v~i 352 (524)
T PRK06188 280 LSSLE---TVYYGASPMSPVRLAEAIERFG-PIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRP-TP-GLRVAL 352 (524)
T ss_pred Cccee---EEEEcCCCCCHHHHHHHHHHhC-chhh-heeCccccCCceeecCchhccccccccCCccccc-cC-CcEEEE
Confidence 45777 5555552 334455556674 6777 99999998443322111 0 00112222 12 233555
Q ss_pred EeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEE
Q 008068 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKF 424 (579)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f 424 (579)
++++ ++ ++..|+.|||+|++ ..||| ||+|||+++.+. ...+.|
T Consensus 353 ~~~~------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~ 411 (524)
T PRK06188 353 LDED------------GR-----EVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYI 411 (524)
T ss_pred EcCC------------CC-----CCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEE
Confidence 5432 22 45679999999987 35555 699999999985 578999
Q ss_pred EeeeCceEeeceeecCHHHHHHHHHH
Q 008068 425 ICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 425 ~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
.||.+++++++|+++++.+||+++.+
T Consensus 412 ~GR~~~~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 412 VDRKKDMIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred EeccccceecCCEEECHHHHHHHHHh
Confidence 99999999999999999999998865
No 86
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.27 E-value=3.5e-10 Score=126.89 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=90.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCCcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLPPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~---~~~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ .+.+||. .....++++.+ +++++ +.||+||+........ ...++..|. ..++. -+++++.+
T Consensus 323 ~~lr---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~~~~-- 393 (563)
T PRK06710 323 SSIR---ACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSIGV-PWPDT-EAMIMSLE-- 393 (563)
T ss_pred hhhh---heeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCccCC-CCCCC-eEEEEECC--
Confidence 5677 5566652 45556677767 58898 9999999753211111 111111232 23333 34555543
Q ss_pred CcccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
. +. .+..|+.|||+|++. .||| +|+|||++..+. ...+.++||.+|
T Consensus 394 ~---------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd 455 (563)
T PRK06710 394 T---------GE-----ALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKD 455 (563)
T ss_pred C---------Cc-----cCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeecccc
Confidence 1 12 457799999999773 5555 399999999875 678999999999
Q ss_pred eEeeceeecCHHHHHHHHHHH
Q 008068 431 LLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 431 ~i~~~Gekv~e~~v~~av~~~ 451 (579)
+++++|++|++.+||+++.+.
T Consensus 456 ~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 456 MIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred EEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999764
No 87
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.27 E-value=8.4e-10 Score=123.26 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=86.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCCC---cccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLP---PELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~~~---~~~~~~~l~~~~~~~Efip~~ 364 (579)
.++++ .+.+||. ....+.+.+ + +++++ +.||+||+.. ++.....+. ....|.. ..+..++.++.+
T Consensus 301 ~~~lr---~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~i~d~~ 372 (547)
T PRK06087 301 LSALR---FFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGYA--AAGVEIKVVDEA 372 (547)
T ss_pred CCCeE---EEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCcc--CCCceEEEEcCC
Confidence 35678 6666663 344444444 3 68999 9999999743 221111110 1111221 233455555432
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
+. +++.|+.|||+|.+ ..||| +|+|||+++.+. .+.+.|+||
T Consensus 373 ------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR 431 (547)
T PRK06087 373 ------------RK-----TLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGR 431 (547)
T ss_pred ------------CC-----CCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEec
Confidence 22 45679999999955 34443 699999999975 578999999
Q ss_pred eCceEeeceeecCHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
.+|+++++|+++++.+|+++|.+
T Consensus 432 ~~d~i~~~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 432 KKDIIVRGGENISSREVEDILLQ 454 (547)
T ss_pred chhhhhcCCEEECHHHHHHHHHh
Confidence 99999999999999999999975
No 88
>PRK12316 peptide synthase; Provisional
Probab=99.27 E-value=2.2e-10 Score=156.10 Aligned_cols=133 Identities=15% Similarity=0.153 Sum_probs=89.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecC---CCCCCcc----cccceecCCceEEEEE
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV---NPSLPPE----LATFAVLPNIGYFEFI 361 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~---~~~~~~~----~~~~~l~~~~~~~Efi 361 (579)
.|+|+ +++.||. ....+++.+.++++.++ +.||+||+.+.... .+..+.+ ..|..+ ++. -.-.+
T Consensus 2260 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~-~~~i~ 2333 (5163)
T PRK12316 2260 PPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRAL-GNR-RAYIL 2333 (5163)
T ss_pred Cccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCccccc-CCC-EEEEE
Confidence 35788 7777773 44445555556778888 99999998553221 1111110 123322 221 12222
Q ss_pred eCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEeceeC
Q 008068 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHN 417 (579)
Q Consensus 362 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~ 417 (579)
+.+ .. .|+.|+.|||+|.. ..||| +|||||+++.+.
T Consensus 2334 d~~------------~~-----~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~--- 2393 (5163)
T PRK12316 2334 DAD------------LN-----LLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRA--- 2393 (5163)
T ss_pred CCC------------CC-----CCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcC---
Confidence 221 22 45789999999965 35554 599999999985
Q ss_pred CCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 418 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.+.|+||.+++++++|.+|.+.|||.+|.+.
T Consensus 2394 -dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2394 -DGVVEYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred -CCcEEEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 689999999999999999999999999999763
No 89
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.26 E-value=8.6e-10 Score=128.03 Aligned_cols=132 Identities=17% Similarity=0.199 Sum_probs=87.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC-CCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS-LPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~-~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++|+ .+.+||+ ....+.++..+ |+++. ++||+||+...+... +. ..++..|..+.| -.|+.-.+ .
T Consensus 461 ~~lr---~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~p---g~e~ki~d--~ 530 (746)
T PTZ00342 461 PNLE---VILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISP---NTKYKVRT--W 530 (746)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCC---cEEEEEec--c
Confidence 6788 6777774 44555566667 58999 999999974322211 11 122233433223 23443322 0
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
.+ .. ....+..|||+|.. +.||| ||+|||+++++. .+.+.|+||.+|
T Consensus 531 ~~-------~~-----~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kd 594 (746)
T PTZ00342 531 ET-------YK-----ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKG 594 (746)
T ss_pred cc-------cc-----cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCC
Confidence 00 01 11234568999965 57777 699999999985 689999999999
Q ss_pred eEee-ceeecCHHHHHHHHHH
Q 008068 431 LLTI-NIDKNTEKDLQLSVDE 450 (579)
Q Consensus 431 ~i~~-~Gekv~e~~v~~av~~ 450 (579)
++++ +||+|++.+||+++.+
T Consensus 595 lIkls~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 595 LVKLSQGEYIETDMLNNLYSQ 615 (746)
T ss_pred eEEeCCCEEEchHHHHHHHhc
Confidence 9995 7999999999999875
No 90
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.26 E-value=1.5e-09 Score=122.89 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=86.5
Q ss_pred CCCCceeeEEeecC-hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCcccccceecC---CceEEEEEeCCCCC
Q 008068 292 FPNAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLP---NIGYFEFIPQRLGN 367 (579)
Q Consensus 292 wP~l~~i~~~~~g~-~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~---~~~~~Efip~~~~~ 367 (579)
.++++ ++.+++ .....+++.+.+|...++ +.||+||+.+.+.. ....++..+..... ...+..+-+..
T Consensus 313 ~~~l~---~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~--- 384 (600)
T PRK08279 313 DHRLR---LMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDVDT--- 384 (600)
T ss_pred Cccee---EEecCCCCHHHHHHHHHHhCcceee-eeecccccceeecc-cCCCCcccccccccccccceeeeeccCc---
Confidence 35666 444444 355666777788644577 99999998654321 11112223332110 12222221110
Q ss_pred cccccccCCCccccccccCCCceEEEEEc--c---ccce-------------------eccccCCEEEEeceeCCCCEEE
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVT--N---VAGL-------------------YRYRLGDVVKVMGFHNSTPELK 423 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvT--t---~~Gl-------------------~RYr~GDvv~v~~~~~~~P~i~ 423 (579)
+......++ .+.++++|+.|||++. . +.|| -+|+|||+++++. ...+.
T Consensus 385 -~~~i~~~~~---~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~ 456 (600)
T PRK08279 385 -GEPVRDADG---RCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQ 456 (600)
T ss_pred -CceeeCCCC---ccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEE
Confidence 000000011 1235678999999842 2 2332 2699999999985 57899
Q ss_pred EEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 424 FICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 424 f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
|.||.+|+++++|++|++.+||+++.+
T Consensus 457 ~~GR~~d~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 457 FVDRLGDTFRWKGENVATTEVENALSG 483 (600)
T ss_pred EecccCCeEEECCcccCHHHHHHHHhc
Confidence 999999999999999999999999986
No 91
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.26 E-value=1.3e-09 Score=119.28 Aligned_cols=128 Identities=17% Similarity=0.187 Sum_probs=84.9
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccce-ecCCCC---CCcccccceecCCceEEEEEeCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~-~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
.+++ ++..||. ...++.+++ + +++++ +.||+||.... +...+. ...+..|..+ ++ .|+.-.+
T Consensus 254 ~~lr---~~~~~g~~~~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~-~~---~~~~i~~- 322 (483)
T PRK03640 254 SSFR---CMLLGGGPAPKPLLEQCKE-K-GIPVY-QSYGMTETASQIVTLSPEDALTKLGSAGKPL-FP---CELKIEK- 322 (483)
T ss_pred Ccce---EEEEcCCCCCHHHHHHHHH-h-CCCee-eeeccCcccccccccCcccccccCCCccccc-CC---cEEEEec-
Confidence 4677 6666663 334444544 4 68999 99999996432 211111 1111223221 22 2332222
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+ +. +++.|+.|||+|++. .||+ +|+|||+++.+. .+.+.|.||.+
T Consensus 323 -~---------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~ 383 (483)
T PRK03640 323 -D---------GV-----VVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRS 383 (483)
T ss_pred -C---------CC-----cCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeeccc
Confidence 1 11 457799999999873 4554 599999999985 57899999999
Q ss_pred ceEeeceeecCHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~ 450 (579)
|+++++|++|++.+||+++.+
T Consensus 384 ~~i~~~G~~v~~~~ie~~i~~ 404 (483)
T PRK03640 384 DLIISGGENIYPAEIEEVLLS 404 (483)
T ss_pred CeEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 92
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.25 E-value=5.6e-10 Score=126.93 Aligned_cols=130 Identities=18% Similarity=0.210 Sum_probs=77.5
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHH----hC-CCCeeccccccCcccceecCC--CCCCcccccceecCCceEEEE
Q 008068 291 LFPNAKYLSGIMTGSM---EHYLKKLRHY----AG-DLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEF 360 (579)
Q Consensus 291 lwP~l~~i~~~~~g~~---~~~~~~l~~~----~g-~v~v~~~~YgaSEg~i~~~~~--~~~~~~~~~~~l~~~~~~~Ef 360 (579)
.+++|+ .+.+||. ....+++++. +| +++++ +.||+||+...+... +...++..|.. .++ .|+
T Consensus 332 ~~~~lr---~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p-~pg---~~v 403 (614)
T PRK08180 332 FFSRLK---LLFYAGAALSQDVWDRLDRVAEATCGERIRMM-TGLGMTETAPSATFTTGPLSRAGNIGLP-APG---CEV 403 (614)
T ss_pred hcccee---EEEEccCCCCHHHHHHHHHHHHhhcCCCceee-eeecccccCCceEecccccCCCCcccCc-cCC---cEE
Confidence 467888 6777774 4444555543 43 37788 999999974322111 11111112221 111 121
Q ss_pred EeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEE
Q 008068 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELK 423 (579)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~ 423 (579)
... ..|..|||+|.+ +.||| +|+|||++++++-......+.
T Consensus 404 ~i~----------------------d~~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~ 461 (614)
T PRK08180 404 KLV----------------------PVGGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLM 461 (614)
T ss_pred EEe----------------------cCCCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceE
Confidence 111 124567999965 45666 699999999953111245789
Q ss_pred EEeeeCceEe-eceeecC--HHHHHHHHHH
Q 008068 424 FICRRNLLLT-INIDKNT--EKDLQLSVDE 450 (579)
Q Consensus 424 f~gR~~d~i~-~~Gekv~--e~~v~~av~~ 450 (579)
|+||.+|+++ .+|+++. +.|++.++.+
T Consensus 462 i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~ 491 (614)
T PRK08180 462 FDGRIAEDFKLSSGTWVSVGPLRARAVSAG 491 (614)
T ss_pred EecchhhhEEcCCCcEecchhhhHHHHhhc
Confidence 9999998877 4698766 7788777654
No 93
>PRK12316 peptide synthase; Provisional
Probab=99.25 E-value=2.2e-10 Score=155.98 Aligned_cols=133 Identities=14% Similarity=0.115 Sum_probs=90.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----CCCcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----SLPPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~----~~~~~~~~~~l~~~~~~~Efip~~ 364 (579)
.++++ .++.||. ....+++.+.+++++++ +.||+||+.+.+.... .......|.. .++. -+..++.+
T Consensus 769 ~~~l~---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~-~~~i~d~~ 842 (5163)
T PRK12316 769 CTSLR---RIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGRP-IANL-ACYILDAN 842 (5163)
T ss_pred CCCcc---EEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCccc-cCCC-EEEEECCC
Confidence 46788 5666663 44555565556778999 9999999864332111 1111112332 1222 22233321
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------------ccccCCEEEEeceeCCCCE
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------------RYr~GDvv~v~~~~~~~P~ 421 (579)
++ .++.|+.|||+|.+ ..||+ +|+|||+++.+. .+.
T Consensus 843 ------------~~-----~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----dG~ 901 (5163)
T PRK12316 843 ------------LE-----PVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA----DGV 901 (5163)
T ss_pred ------------CC-----CCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC----CCC
Confidence 22 45789999999966 35554 699999999985 689
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+.|+||.+++++++|++|.+.|||.+|.+.
T Consensus 902 l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~ 931 (5163)
T PRK12316 902 IEYAGRIDHQVKLRGLRIELGEIEARLLEH 931 (5163)
T ss_pred EEeecccCCEEEEceEEcChHHHHHHHHhC
Confidence 999999999999999999999999999763
No 94
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.24 E-value=1.9e-09 Score=121.49 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=54.9
Q ss_pred ccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHH
Q 008068 384 EVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 447 (579)
Q Consensus 384 eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~a 447 (579)
++..|+.|||+|++ ..||| +|+|||++.+ . ...+.|+||.+|+++++|++|++.+||++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 45678999999976 35666 6999999987 4 57899999999999999999999999999
Q ss_pred HHHH
Q 008068 448 VDEA 451 (579)
Q Consensus 448 v~~~ 451 (579)
|.+.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 95
>PRK05691 peptide synthase; Validated
Probab=99.23 E-value=5.8e-10 Score=150.55 Aligned_cols=133 Identities=13% Similarity=0.146 Sum_probs=92.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC----CCCCcccccceecCCceEEEEEeCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN----PSLPPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~----~~~~~~~~~~~l~~~~~~~Efip~~ 364 (579)
.|+|+ .++.||. ....+++.+.+++++++ +.||.||+.+.+... ........|..+ ++ ..+..++.+
T Consensus 1387 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~-~~-~~~~i~d~~ 1460 (4334)
T PRK05691 1387 CTSLR---RLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRPL-GN-VLCRVLDAE 1460 (4334)
T ss_pred CCccc---EEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCccccee-CC-CEEEEECCC
Confidence 46788 6677763 55556677777789999 999999986533211 111111123322 22 233333322
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEeceeCCCC
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNSTP 420 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~~~P 420 (579)
.+ .++.|+.|||+|.. ..||+ +|||||+++... .+
T Consensus 1461 ------------~~-----~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG 1519 (4334)
T PRK05691 1461 ------------LN-----LLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DG 1519 (4334)
T ss_pred ------------CC-----CCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CC
Confidence 22 45789999999965 24443 599999999985 68
Q ss_pred EEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 421 ~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.|+||.+++++++|++|.+.+||.+|.+.
T Consensus 1520 ~l~~~GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1520 ALEYLGRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred CEEEecccCcEEEECCEEcCHHHHHHHHHhC
Confidence 9999999999999999999999999999753
No 96
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.23 E-value=2.3e-09 Score=113.31 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=40.2
Q ss_pred ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 403 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
||+|||++++ . ...+.|+||.+|+++++|++|++.+||.+|.+.
T Consensus 235 ~~~TGDl~~~-~----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGAL-D----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEE-e----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 8999999998 3 468999999999999999999999999999754
No 97
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.23 E-value=2.6e-09 Score=117.83 Aligned_cols=131 Identities=13% Similarity=0.049 Sum_probs=88.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CcccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+.+++ ++..||. ....+.+++.+ +.+++ ..||+||+....-....+ .++..|..+ ..-++.++.+
T Consensus 261 ~~~lr---~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~- 331 (502)
T PRK08276 261 VSSLR---VAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDED- 331 (502)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECCC-
Confidence 45677 6677773 55667777778 46777 999999975311111111 111223322 2234444321
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
+. .+..|+.|||++++. .|+| +|+|||+++++. ...+.++||.
T Consensus 332 -----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~ 391 (502)
T PRK08276 332 -----------GN-----ELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRK 391 (502)
T ss_pred -----------CC-----CCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccC
Confidence 12 456799999999842 3443 689999999985 5789999999
Q ss_pred CceEeeceeecCHHHHHHHHHHH
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+++++++|+++++.+||.++.+.
T Consensus 392 ~~~i~~~G~~v~~~~iE~~i~~~ 414 (502)
T PRK08276 392 SDMIISGGVNIYPQEIENLLVTH 414 (502)
T ss_pred cceEEeCCEEeCHHHHHHHHHhC
Confidence 99999999999999999999753
No 98
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.22 E-value=3.7e-09 Score=114.10 Aligned_cols=59 Identities=12% Similarity=-0.009 Sum_probs=51.5
Q ss_pred CCceEEEEEccccceeccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 387 VGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 387 ~G~~yeLVvTt~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.|+.+|+++++..| +|+|||+++.+. ...+.|+||.+++++++|++|++.+||.++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 36678999988665 688999999875 578999999999999999999999999999753
No 99
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.22 E-value=1.3e-09 Score=126.41 Aligned_cols=132 Identities=11% Similarity=0.017 Sum_probs=81.7
Q ss_pred CCCCceeeEEeecChH---HHHHHHHHHhCCCCeeccccccCcccceecC-CCCCC--cccccceecCCceEEEEEeCCC
Q 008068 292 FPNAKYLSGIMTGSME---HYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPSLP--PELATFAVLPNIGYFEFIPQRL 365 (579)
Q Consensus 292 wP~l~~i~~~~~g~~~---~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~-~~~~~--~~~~~~~l~~~~~~~Efip~~~ 365 (579)
+++|+ .+.+||.+ .....+.+.++..++. +.||.||+...+.. .+..+ ++..+.. .++ .-...++.+
T Consensus 470 lssLr---~i~s~Ge~l~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g-~~v~v~d~~- 542 (728)
T PLN03052 470 WSSIR---CFGSTGEASSVDDYLWLMSRAGYKPII-EYCGGTELGGGFVTGSLLQPQAFAAFSTP-AMG-CKLFILDDS- 542 (728)
T ss_pred hhhee---EEEecCCCCCHHHHHHHHHhcCCCCeE-eeccChhhCcccccCCCCCCCCCCccccC-CCC-ceEEEECCC-
Confidence 46788 66777642 2223344445446777 99999997432211 11111 1112221 122 123333321
Q ss_pred CCcccccccCCCccccccccCCCc--eEEEEEccc--c------------cee----------ccccCCEEEEeceeCCC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGE--EYEIIVTNV--A------------GLY----------RYRLGDVVKVMGFHNST 419 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~--~yeLVvTt~--~------------Gl~----------RYr~GDvv~v~~~~~~~ 419 (579)
++ +|..|+ .|||++... . ++| .|+|||+++.+. .
T Consensus 543 -----------g~-----~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~----d 602 (728)
T PLN03052 543 -----------GN-----PYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTS----G 602 (728)
T ss_pred -----------CC-----CCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECC----C
Confidence 23 344564 699999531 1 122 489999999985 6
Q ss_pred CEEEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 420 PELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 420 P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
..+.|+||.+|+||++|++|.+.|||++|..
T Consensus 603 G~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 603 GYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred CeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 8899999999999999999999999999864
No 100
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.22 E-value=3.8e-09 Score=116.94 Aligned_cols=130 Identities=16% Similarity=0.104 Sum_probs=85.9
Q ss_pred CCCceeeEEeecC--hHHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~--~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
+.++ ++..++ ....+.++.+.+ +++++ +.||+||+....... +. +.....|..+ + +.-.+.++.+
T Consensus 288 ~~l~---~~~~~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~-g~~~~i~d~~--- 357 (517)
T PRK08008 288 HCLR---EVMFYLNLSDQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRPG-F-CYEAEIRDDH--- 357 (517)
T ss_pred ccce---eeEEecCCCHHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCccccCC-C-CcEEEEECCC---
Confidence 4566 444443 345556677777 58999 999999974322111 11 1111122211 1 2334444432
Q ss_pred cccccccCCCccccccccCCCceEEEEEccc------ccee--------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
+. ++..|+.|||+++.. .||| +|+|||++.++. ...+.|+||
T Consensus 358 ---------~~-----~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR 419 (517)
T PRK08008 358 ---------NR-----PLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDR 419 (517)
T ss_pred ---------CC-----CCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeec
Confidence 22 456799999999852 3444 599999999985 678999999
Q ss_pred eCceEeeceeecCHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
.+|+++++|+++++.+||.++.+
T Consensus 420 ~~d~i~~~G~~i~p~~iE~~l~~ 442 (517)
T PRK08008 420 RCNMIKRGGENVSCVELENIIAT 442 (517)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 101
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.21 E-value=2e-09 Score=121.62 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=52.9
Q ss_pred CceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 388 GEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 388 G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+.|||+|++ +.||| ||+|||+++.+. .+.+.|+||.+|+++++|++|++.+||.++.+.
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYKY 465 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHhC
Confidence 4679999976 46776 699999999975 679999999999999999999999999999853
No 102
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.21 E-value=2e-09 Score=130.84 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=85.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++++ .+.+||. +..++.+++.+ +++++ +.||+||+...+...+. ..++..|..+ |+ .-....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~-~g-~~~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGRLL-PG-IEYRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCccC-CC-CeEEEeecC---
Confidence 5677 6677773 55556666667 58898 99999998543322111 1111122211 11 111222211
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
..|+.|||.|.+ ..||| ||+|||+++.+. ...+.|+||.+|
T Consensus 977 ------------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d 1034 (1140)
T PRK06814 977 ------------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKR 1034 (1140)
T ss_pred ------------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccC
Confidence 136778999865 24444 699999999985 689999999999
Q ss_pred eEeeceeecCHHHHHHHHHHH
Q 008068 431 LLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 431 ~i~~~Gekv~e~~v~~av~~~ 451 (579)
+++++|++|++.+||+++.+.
T Consensus 1035 ~i~~~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1035 FAKIAGEMISLAAVEELAAEL 1055 (1140)
T ss_pred eeeeCCEEECHHHHHHHHHhc
Confidence 999999999999999998764
No 103
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=99.21 E-value=1.1e-10 Score=123.49 Aligned_cols=63 Identities=16% Similarity=0.326 Sum_probs=56.3
Q ss_pred ccCCCceEEEEEc---ccccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHH
Q 008068 384 EVKVGEEYEIIVT---NVAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 446 (579)
Q Consensus 384 eve~G~~yeLVvT---t~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~ 446 (579)
+++.|..|||++. +..||| ||+|||+.+.+. .+.++++||.+|||..+||+|++.|||+
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 5567888999994 567888 799999999996 6899999999999999999999999999
Q ss_pred HHHH
Q 008068 447 SVDE 450 (579)
Q Consensus 447 av~~ 450 (579)
.+.+
T Consensus 502 fL~~ 505 (596)
T KOG1177|consen 502 FLNK 505 (596)
T ss_pred HHhh
Confidence 8875
No 104
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.20 E-value=6.5e-09 Score=117.01 Aligned_cols=63 Identities=27% Similarity=0.342 Sum_probs=54.7
Q ss_pred ccCCCceEEEEEcc---cccee-------------------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeec
Q 008068 384 EVKVGEEYEIIVTN---VAGLY-------------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 435 (579)
Q Consensus 384 eve~G~~yeLVvTt---~~Gl~-------------------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~ 435 (579)
+++.|+.|||+|.+ ..||| +|+|||++.++ ...+.|+||.+|+|+++
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEEC
Confidence 56789999999976 34555 79999999875 36899999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 008068 436 IDKNTEKDLQLSVDEA 451 (579)
Q Consensus 436 Gekv~e~~v~~av~~~ 451 (579)
|++|++.+||++|.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999864
No 105
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.19 E-value=3.6e-09 Score=114.24 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=50.7
Q ss_pred ceEEEEEccc---ccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 389 EEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 389 ~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+.|||+|++. .||| +|+|||+++.+. .+.+.+.||.+|+++++|++|+..+||+++.+
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 6789999873 4555 399999999986 57899999999999999999999999999975
No 106
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.18 E-value=7.7e-10 Score=118.70 Aligned_cols=119 Identities=21% Similarity=0.334 Sum_probs=79.7
Q ss_pred cCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccc-eecCC-CCC--CcccccceecCCceEEEEEeC
Q 008068 291 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVN-PSL--PPELATFAVLPNIGYFEFIPQ 363 (579)
Q Consensus 291 lwP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~-~~~--~~~~~~~~l~~~~~~~Efip~ 363 (579)
-+++++ .+.+|| .....+++++.++.++++ +.||+||++. ++... ... ..+..|.. .| +.-+++++.
T Consensus 275 ~l~~lr---~v~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~ivd~ 348 (417)
T PF00501_consen 275 DLSSLR---TVISGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVGKP-LP-GVEVKIVDP 348 (417)
T ss_dssp TGTT-S---EEEEESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEBEE-ST-TEEEEEECT
T ss_pred cccccc---ccccccccCChhhccccccccccccce-ecccccccceeeeccccccccccccccccc-cc-ccccccccc
Confidence 355688 444444 366777888888655888 9999999754 43211 111 12223332 23 556677765
Q ss_pred CCCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEe
Q 008068 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 426 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~g 426 (579)
+ +++ .+++|+.|||+|++ ..||| +|+|||+++++. .+.+.++|
T Consensus 349 ~-----------~~~-----~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~G 408 (417)
T PF00501_consen 349 N-----------TGE-----PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILG 408 (417)
T ss_dssp T-----------TSS-----BESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEE
T ss_pred c-----------ccc-----cccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEE
Confidence 3 123 44789999999986 35555 599999999984 58999999
Q ss_pred eeCceEeec
Q 008068 427 RRNLLLTIN 435 (579)
Q Consensus 427 R~~d~i~~~ 435 (579)
|.+|+|+++
T Consensus 409 R~~~~i~~~ 417 (417)
T PF00501_consen 409 RSDDMIKVR 417 (417)
T ss_dssp EGSCEEEET
T ss_pred eeCCEEEeC
Confidence 999999874
No 107
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.17 E-value=1.3e-09 Score=125.08 Aligned_cols=132 Identities=15% Similarity=0.181 Sum_probs=83.9
Q ss_pred CCCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCcccccceecCCceEEEEE--eCCC
Q 008068 293 PNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFI--PQRL 365 (579)
Q Consensus 293 P~l~~i~~~~~g~~--~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~--~~~~~~~~~l~~~~~~~Efi--p~~~ 365 (579)
++++ .+.+||+ .+...++-+.+++++++ ++||+||+...+... +. ..++..|.. .+ ..|+. +.+
T Consensus 383 ~~lr---~~~~gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p-~~---~~evki~d~~- 453 (660)
T PLN02430 383 GRLR---LLISGGAPLSTEIEEFLRVTSCAFVV-QGYGLTETLGPTTLGFPDEMCMLGTVGAP-AV---YNELRLEEVP- 453 (660)
T ss_pred CeEE---EEEECCCCCCHHHHHHHHHhcCCCee-eecchhhhhhceEeeccccCCCCCCccCC-CC---ceEEEEEEcC-
Confidence 3577 6677774 22223333445557888 999999974322111 11 112223332 12 22332 222
Q ss_pred CCcccccccCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+.+ - .++..|..|||+|++ +.||| ||+|||+++++. ...+.|+||.+
T Consensus 454 -~~g--------~----~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~k 516 (660)
T PLN02430 454 -EMG--------Y----DPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKK 516 (660)
T ss_pred -CcC--------c----ccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEccc
Confidence 111 0 133446679999976 47777 699999999985 67899999999
Q ss_pred ceEee-ceeecCHHHHHHHHHH
Q 008068 430 LLLTI-NIDKNTEKDLQLSVDE 450 (579)
Q Consensus 430 d~i~~-~Gekv~e~~v~~av~~ 450 (579)
|+|++ +|++|++.+||.++.+
T Consensus 517 d~ik~~~G~~V~p~~IE~~l~~ 538 (660)
T PLN02430 517 NLIKLSQGEYVALEYLENVYGQ 538 (660)
T ss_pred ccEEcCCCcEEchHHHHHHHhc
Confidence 99996 6999999999998864
No 108
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.16 E-value=3.8e-09 Score=117.98 Aligned_cols=133 Identities=8% Similarity=0.048 Sum_probs=84.7
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-------C------cccccceecCCc
Q 008068 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-------P------PELATFAVLPNI 355 (579)
Q Consensus 292 wP~l~~i~~~~~g~---~~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~-------~------~~~~~~~l~~~~ 355 (579)
+++++ .+.+|| .....+++++.+ +++++ +.||+||+.......... + ....|..+ .+
T Consensus 292 ~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~--pg 364 (539)
T PRK07008 292 FSTLR---RTVIGGSACPPAMIRTFEDEY-GVEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVI--YG 364 (539)
T ss_pred cccce---EEEEcCCCCCHHHHHHHHHHh-CCcee-cccccccccccceecccccccccCCchhhhhhcccCCccc--cc
Confidence 46777 555555 255666777778 58999 999999974311110000 0 00112111 12
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee----------ccccCCEEEEeceeCCCCEE
Q 008068 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPEL 422 (579)
Q Consensus 356 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~----------RYr~GDvv~v~~~~~~~P~i 422 (579)
.-.++++.+ ...+. ...++.|||++++ ..||| +|+|||+++.+. ...+
T Consensus 365 ~~~~i~d~~------------~~~~~---~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l 425 (539)
T PRK07008 365 VDMKIVGDD------------GRELP---WDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFM 425 (539)
T ss_pred eEEEEECCC------------CCccC---CCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcE
Confidence 233444322 12111 1123568999987 24444 499999999985 5789
Q ss_pred EEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 423 KFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 423 ~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
.|+||.+|+++++|++|++.+||+++..
T Consensus 426 ~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 426 QITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred EEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 9999999999999999999999999875
No 109
>PRK05691 peptide synthase; Validated
Probab=99.15 E-value=1e-09 Score=148.20 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=88.4
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecC---CCCCCcc---cccceecCCceEEEEEe
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV---NPSLPPE---LATFAVLPNIGYFEFIP 362 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~---~~~~~~~---~~~~~l~~~~~~~Efip 362 (579)
.++|+ .++.||- ....+++.+.++++.++ +.||.||+.+.+.. +.....+ ..|..+ ++...+ .++
T Consensus 3982 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~-v~d 4055 (4334)
T PRK05691 3982 LDGLR---WMLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSPT-DNNRLY-LLD 4055 (4334)
T ss_pred CCCce---EEEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCCcc-CCCEEE-EEC
Confidence 35788 5666662 34444555556788999 99999998654321 1111100 012211 222111 111
Q ss_pred CCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEeceeCC
Q 008068 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNS 418 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~~ 418 (579)
.. .. .|+.|..|||+|.. ..||+ .|||||+++...
T Consensus 4056 ~~------------~~-----~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~---- 4114 (4334)
T PRK05691 4056 EA------------LE-----LVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS---- 4114 (4334)
T ss_pred CC------------CC-----CCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----
Confidence 11 12 35679999999976 35555 399999999985
Q ss_pred CCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 419 TPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 419 ~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+.++|+||.|+.++++|.+|...|||.++.+.
T Consensus 4115 dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4115 DGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred CCcEEEecccCCcEEeceEEecHHHHHHHHHhC
Confidence 689999999999999999999999999998753
No 110
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.15 E-value=9.8e-10 Score=125.21 Aligned_cols=128 Identities=22% Similarity=0.331 Sum_probs=78.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHH----hC-CCCeeccccccCcccceecCCC-C-CCcccccceecCCceEEEEE
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHY----AG-DLPLMSADYGSSEGWIGANVNP-S-LPPELATFAVLPNIGYFEFI 361 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~----~g-~v~v~~~~YgaSEg~i~~~~~~-~-~~~~~~~~~l~~~~~~~Efi 361 (579)
+++|+ .+.+||. ....+.+++. +| +++++ ++||+||+...+.... . ...+..|.. .|+ +|+
T Consensus 345 ~~slr---~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p-~pg---~~v- 415 (624)
T PRK12582 345 FKNLR---LMAYGGATLSDDLYERMQALAVRTTGHRIPFY-TGYGATETAPTTTGTHWDTERVGLIGLP-LPG---VEL- 415 (624)
T ss_pred hhhee---EEEecCCCCCHHHHHHHHHHHHhhcCCCceEE-eccccccccceeecccCCCCCCCCCCcC-CCC---cEE-
Confidence 56788 6677773 4444555553 33 37888 9999999753322111 0 011111211 111 111
Q ss_pred eCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEE
Q 008068 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKF 424 (579)
Q Consensus 362 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f 424 (579)
+ -+..|+.|||+|.+ +.||| +|+|||++++.+.......+.|
T Consensus 416 ----------------~-----i~~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i 474 (624)
T PRK12582 416 ----------------K-----LAPVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIF 474 (624)
T ss_pred ----------------E-----EccCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEE
Confidence 1 12458889999966 46776 4999999998432112457899
Q ss_pred EeeeCceEee-ceeecCHHHHH--HHHH
Q 008068 425 ICRRNLLLTI-NIDKNTEKDLQ--LSVD 449 (579)
Q Consensus 425 ~gR~~d~i~~-~Gekv~e~~v~--~av~ 449 (579)
+||.+|++++ +|+||++.++| .++.
T Consensus 475 ~GR~~d~i~~~~G~~i~p~~iE~e~~l~ 502 (624)
T PRK12582 475 DGRVAEDFKLSTGTWVSVGTLRPDAVAA 502 (624)
T ss_pred eccchhhEecCCCcEechHHHHHHHHHh
Confidence 9999999885 79999988885 4444
No 111
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=99.15 E-value=5.7e-10 Score=124.41 Aligned_cols=134 Identities=19% Similarity=0.193 Sum_probs=92.3
Q ss_pred ccCCCCceeeEEeecChHHH---HHHHHHHhCCCCeeccccccCcccceecC-CCCC-CcccccceecCCceEEEEEeCC
Q 008068 290 ELFPNAKYLSGIMTGSMEHY---LKKLRHYAGDLPLMSADYGSSEGWIGANV-NPSL-PPELATFAVLPNIGYFEFIPQR 364 (579)
Q Consensus 290 ~lwP~l~~i~~~~~g~~~~~---~~~l~~~~g~v~v~~~~YgaSEg~i~~~~-~~~~-~~~~~~~~l~~~~~~~Efip~~ 364 (579)
.|+++.+ .+++|+++.- ..-++..+ |++++ ++||.||+..|... .+.+ ..+..|..+ | .+-+=++++.
T Consensus 416 ~LGg~vr---~~~sGaAPls~ev~~F~r~~~-g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~p~-p-~~~vKL~dvp 488 (691)
T KOG1256|consen 416 SLGGNVR---LIISGAAPLSPEVLTFFRAAL-GCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGPPV-P-GNEVKLVDVP 488 (691)
T ss_pred HhcCcee---EEEecCCCCCHHHHHHHHHhc-Cceee-ecccccccCCceEeccCCCCCCCCcCCcc-c-CceEEEechH
Confidence 4678899 8889986332 22233334 69999 99999998643322 1211 223344432 2 2223333443
Q ss_pred CCCcccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
|.+ --..|..|||.|.. +.||| |.+|||+++++. .+.+.++||
T Consensus 489 --e~n--------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidR 548 (691)
T KOG1256|consen 489 --EMN--------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDR 548 (691)
T ss_pred --HhC--------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEec
Confidence 222 11346689999955 69999 899999999996 789999999
Q ss_pred eCceEeec-eeecCHHHHHHHHHH
Q 008068 428 RNLLLTIN-IDKNTEKDLQLSVDE 450 (579)
Q Consensus 428 ~~d~i~~~-Gekv~e~~v~~av~~ 450 (579)
.++++++. ||.|.+..||++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99998886 899999999999876
No 112
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.15 E-value=3.6e-10 Score=130.61 Aligned_cols=132 Identities=14% Similarity=0.188 Sum_probs=84.7
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-C-CCCcccccceecCCceEEEEEeCCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P-SLPPELATFAVLPNIGYFEFIPQRLGN 367 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~-~~~~~~~~~~l~~~~~~~Efip~~~~~ 367 (579)
++++ .+.+||. ....+.++..+ + +++ ++||+||+....... + ....+..|.. .++. -+-+++.+ +
T Consensus 428 ~~lr---~i~~GGa~l~~~~~~~~~~~~-~-~l~-~~YG~TEt~~~~~~~~~~~~~~~svG~p-~~g~-evkI~d~~--~ 497 (700)
T PTZ00216 428 GRVR---AMLSGGGPLSAATQEFVNVVF-G-MVI-QGWGLTETVCCGGIQRTGDLEPNAVGQL-LKGV-EMKLLDTE--E 497 (700)
T ss_pred CcEE---EEEECCCCCCHHHHHHHHHHh-h-hHh-hccCcccccccccccCCCCCCCCCcCCc-CCCe-EEEEeech--h
Confidence 4677 6777774 33334444445 4 888 999999974322111 1 1112223332 2222 12223322 1
Q ss_pred cccccccCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 368 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
. .. .+.+|..|||+|.+ +.||| +|||||+++++. .+.+.|+||.+|
T Consensus 498 ~--------~~-----~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd 560 (700)
T PTZ00216 498 Y--------KH-----TDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKA 560 (700)
T ss_pred h--------cc-----CCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHh
Confidence 0 01 12456678999966 46777 699999999985 689999999999
Q ss_pred eEe-eceeecCHHHHHHHHHHH
Q 008068 431 LLT-INIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 431 ~i~-~~Gekv~e~~v~~av~~~ 451 (579)
+++ .+|++|.+.+||+++.+.
T Consensus 561 ~ik~~~G~~I~p~eIE~~l~~~ 582 (700)
T PTZ00216 561 LAKNCLGEYIALEALEALYGQN 582 (700)
T ss_pred heecCCCceeccHHHHHHHhcC
Confidence 997 899999999999998753
No 113
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.14 E-value=1e-08 Score=115.44 Aligned_cols=131 Identities=18% Similarity=0.127 Sum_probs=84.4
Q ss_pred CCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCC---C------cccccceecCCceEEEE
Q 008068 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL---P------PELATFAVLPNIGYFEF 360 (579)
Q Consensus 294 ~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~-~~~---~------~~~~~~~l~~~~~~~Ef 360 (579)
+++ ++..||. ....+++++.+ +++++ +.||+||+....... +.. . ....+. .+.+..++.
T Consensus 299 ~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~i 371 (576)
T PRK05620 299 SLQ---EIYVGGSAVPPILIKAWEERY-GVDVV-HVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGR--FPASLEYRI 371 (576)
T ss_pred cee---EEEEcCCCCCHHHHHHHHHHh-CCcee-eeccccccccceeeeccCCccccccccccccccCC--cCCceeEEE
Confidence 677 6666663 55556677777 58999 999999974321110 100 0 000111 112223333
Q ss_pred EeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee------------------------------ccccC
Q 008068 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------------------RYRLG 407 (579)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~------------------------------RYr~G 407 (579)
++.. ..+ +...|+.|||+|++ ..||| +|+||
T Consensus 372 ~~~g-------------~~~---~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TG 435 (576)
T PRK05620 372 VNDG-------------QVM---ESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTG 435 (576)
T ss_pred ecCC-------------ccc---cCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecC
Confidence 3321 111 12346789999976 24443 59999
Q ss_pred CEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 408 DVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 408 Dvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++. ...+.|+||.+|++++.|++|++.+||+++.+.
T Consensus 436 D~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~ 475 (576)
T PRK05620 436 DVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMAA 475 (576)
T ss_pred ceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhcC
Confidence 9999875 678999999999999999999999999999753
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.13 E-value=4.1e-09 Score=115.60 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=52.7
Q ss_pred CCceEEEEEcc---cccee--------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 387 VGEEYEIIVTN---VAGLY--------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 387 ~G~~yeLVvTt---~~Gl~--------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.|+.|||+|.+ +.||| +|+|||+++++. .+.+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 48889999954 45655 499999999874 678999999999999999999999999999863
No 115
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.12 E-value=1.9e-08 Score=113.05 Aligned_cols=121 Identities=20% Similarity=0.302 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CC-------CcccccceecCCceEEEEEeCCCCCcccccccCCC
Q 008068 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SL-------PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEP 377 (579)
Q Consensus 307 ~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~--~~-------~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~ 377 (579)
....+++++.+| ..++...||+||......... .. .+...|.. .| +.-+++++++ . +
T Consensus 341 ~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p-~~-g~~v~v~d~~--~---------~ 406 (567)
T PRK06178 341 PDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLP-VP-GTEFKICDFE--T---------G 406 (567)
T ss_pred HHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccc-cC-CcEEEEEcCC--C---------C
Confidence 556667777785 556535799999643221111 00 01112322 22 2345566543 1 2
Q ss_pred ccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCH
Q 008068 378 KPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTE 441 (579)
Q Consensus 378 ~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e 441 (579)
. .+..|+.|||+|++ ..||| +|+|||+++.++ ...+.|+||.+|+++++|+++++
T Consensus 407 ~-----~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~ 477 (567)
T PRK06178 407 E-----LLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFP 477 (567)
T ss_pred C-----cCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECH
Confidence 2 34678999999966 24544 599999999975 57899999999999999999999
Q ss_pred HHHHHHHHH
Q 008068 442 KDLQLSVDE 450 (579)
Q Consensus 442 ~~v~~av~~ 450 (579)
.+||+++.+
T Consensus 478 ~eiE~~l~~ 486 (567)
T PRK06178 478 SEVEALLGQ 486 (567)
T ss_pred HHHHHHHHh
Confidence 999999875
No 116
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.10 E-value=6.2e-09 Score=116.21 Aligned_cols=232 Identities=13% Similarity=0.075 Sum_probs=133.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCccc-ceecCCCCC-CcccccceecCCc-eEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVNPSL-PPELATFAVLPNI-GYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~-i~~~~~~~~-~~~~~~~~l~~~~-~~~Efip~~~~ 366 (579)
+.|+ ++.+.|- ..-.+.+.+.++.-||. +.||+||.+ .-+...+.. |. +.+..-.|.. ..++.++++
T Consensus 359 ~sLk---~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~-~pg~~~~p~~g~~v~i~de~-- 431 (626)
T KOG1175|consen 359 KSLR---TCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPI-KPGSAGKPFPGYDVQILDEN-- 431 (626)
T ss_pred ceEE---EEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCc-CccccCCCCCCcceEEECCC--
Confidence 5577 7777762 33334566667433677 999999963 223222222 11 0122212222 234444432
Q ss_pred CcccccccCCCccccccccCCC-ceEEEEEccc------cceec----------------cccCCEEEEeceeCCCCEEE
Q 008068 367 NLESQVLCIEPKPVGLTEVKVG-EEYEIIVTNV------AGLYR----------------YRLGDVVKVMGFHNSTPELK 423 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G-~~yeLVvTt~------~Gl~R----------------Yr~GDvv~v~~~~~~~P~i~ 423 (579)
+. +++.+ +.+||+++.. .++|. |.|||-++.+ +.+.+.
T Consensus 432 ----------g~-----~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd----~dGY~~ 492 (626)
T KOG1175|consen 432 ----------GN-----ELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRD----EDGYYW 492 (626)
T ss_pred ----------CC-----CcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEc----CCceEE
Confidence 22 34444 7899999652 33442 9999999999 489999
Q ss_pred EEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEE-EEEEeccCCCHHHHHHHHHHHHH
Q 008068 424 FICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYV-IFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 424 f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~-~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
+.||.||+||+.|-+++..|||+||.+.-. +.|=.|+.-.....+.-+ .||=+..+ .+..+++.++|..
T Consensus 493 i~GR~DDviNvsGhRigtaEIE~al~~hp~--------VaEsAvVg~p~~~~ge~v~aFvvl~~g--~~~~~~L~kel~~ 562 (626)
T KOG1175|consen 493 ILGRVDDVINVSGHRIGTAEIESALVEHPA--------VAESAVVGSPDPIKGEVVLAFVVLKSG--SHDPEQLTKELVK 562 (626)
T ss_pred EEecccccccccceeecHHHHHHHHhhCcc--------hhheeeecCCCCCCCeEEEEEEEEcCC--CCChHHHHHHHHH
Confidence 999999999999999999999999965322 223333221111123222 45545433 1122233333443
Q ss_pred hccChhhHHHhhcCCcCCeE-EEEe---ccchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhccc
Q 008068 503 SFVDAGYVSARKVNAIGPLE-LRVV---LKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNI 569 (579)
Q Consensus 503 ~L~n~~Y~~~R~~~~l~p~~-v~~v---~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~~ 569 (579)
.+ +...|-+.-|+ |.+| +.=..-..+++.+.+-.+.-|++-.-.+. |+++++.+.+.+
T Consensus 563 ~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~--dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 563 HV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLA--DPSVIDHLRSIL 624 (626)
T ss_pred HH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccccccC--ChHHHHHHHHhh
Confidence 33 11233333333 4444 22234556776665544444888888999 999999988753
No 117
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.09 E-value=2.4e-08 Score=111.55 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=84.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCc-------------ccccceecCCc
Q 008068 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP-------------ELATFAVLPNI 355 (579)
Q Consensus 292 wP~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~-------------~~~~~~l~~~~ 355 (579)
.|+++ .+.+||. ...++.+++ + +++++ +.||+||+..........++ ...|... +
T Consensus 293 ~~~lr---~~~~~G~~l~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~-- 363 (542)
T PRK06018 293 LPHLK---MVVCGGSAMPRSMIKAFED-M-GVEVR-HAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPP-F-- 363 (542)
T ss_pred cccce---EEEEcCCCCCHHHHHHHHH-h-CCCeE-eeecccccCcccccccCccccccCCchhhhhccccCCCCC-C--
Confidence 47788 6666663 566677877 6 68999 99999997432111100000 0011111 1
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee-----------ccccCCEEEEeceeCCCCE
Q 008068 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------RYRLGDVVKVMGFHNSTPE 421 (579)
Q Consensus 356 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------RYr~GDvv~v~~~~~~~P~ 421 (579)
..|+...+ + +++.+. ...+..|||++.. ..||| +|+|||+++.+. ...
T Consensus 364 -g~~i~v~d--~--------~~~~~~---~~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~ 425 (542)
T PRK06018 364 -GVEMKITD--D--------AGKELP---WDGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGY 425 (542)
T ss_pred -CcEEEEEC--C--------CCCCCC---CCCCceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----Ccc
Confidence 12332222 1 122221 1123579999964 34565 499999999874 578
Q ss_pred EEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 422 LKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 422 i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+.|+||.+|+++++|++|++.+||.++.+
T Consensus 426 ~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 426 MRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred EEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999999999875
No 118
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.99 E-value=7.9e-08 Score=104.97 Aligned_cols=44 Identities=11% Similarity=0.118 Sum_probs=40.3
Q ss_pred ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 403 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+|||+++++ ...+.|+||.+|+++++|++|++.+||++|.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 69999999997 367999999999999999999999999999753
No 119
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.98 E-value=5.2e-08 Score=108.72 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=51.4
Q ss_pred ceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 389 EEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 389 ~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+.|||+|++ ..||| +|+|||+++.+. ...+.|+||.+|+++++|++|++.+||.+|.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 369999987 35665 599999999985 578999999999999999999999999999753
No 120
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.95 E-value=1.3e-08 Score=115.66 Aligned_cols=131 Identities=21% Similarity=0.243 Sum_probs=81.2
Q ss_pred ccCCCceEEEEEcc---cccee--------------------------------ccccCCEEEEeceeCCCCEEEEEeee
Q 008068 384 EVKVGEEYEIIVTN---VAGLY--------------------------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (579)
Q Consensus 384 eve~G~~yeLVvTt---~~Gl~--------------------------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 428 (579)
++++|+.|||+|.. +.||| +|+|||++++. ...+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEecc
Confidence 56789999999966 35655 79999999864 4789999999
Q ss_pred CceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChh
Q 008068 429 NLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAG 508 (579)
Q Consensus 429 ~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~ 508 (579)
+|+|+++|++|++.+||++|.+..+.+ ..+.+.-|.+ ++.. ..+-+++++...+......+++.+.+.+.+ ...
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~~p~V--~~~~v~v~~~-~~~~--~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l-~~~ 571 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEASPMV--RRGYVTAFTV-PAED--NERLVIVAERAAGTSRADPAPAIDAIRAAV-SRR 571 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHhcccc--cCCcEEEEEe-cCCC--cceEEEEEEecCCcccccHHHHHHHHHHHH-HHh
Confidence 999999999999999999998653322 1111222221 2322 234557777653311112233333444443 111
Q ss_pred hHHHhhcCCcCCeEEEEeccchHH
Q 008068 509 YVSARKVNAIGPLELRVVLKGTFQ 532 (579)
Q Consensus 509 Y~~~R~~~~l~p~~v~~v~~gtf~ 532 (579)
| .+.|-.+.+|..+.|.
T Consensus 572 ~-------~~~p~~v~~v~~~~lP 588 (612)
T PRK12476 572 H-------GLAVADVRLVPAGAIP 588 (612)
T ss_pred h-------CCcceEEEEECCCCcC
Confidence 1 2334467777765544
No 121
>PLN02479 acetate-CoA ligase
Probab=98.90 E-value=3.8e-08 Score=110.77 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=51.1
Q ss_pred ceEEEEEcc---cccee-------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHH
Q 008068 389 EEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 389 ~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
+.|||+|+. ..||| +|+|||+++++. ...+.|+||.+|++++.|++|++.+||.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 579999976 35666 699999999874 67899999999999999999999999999975
No 122
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.88 E-value=6.9e-08 Score=106.96 Aligned_cols=130 Identities=11% Similarity=0.034 Sum_probs=88.8
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-C--CcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-L--PPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~-~--~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ .+.+||. ....+++++++ +.+++ ..||+||+......... + .++..|..+ ++ ..++++.+
T Consensus 275 ~~l~---~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~-~g--~~~i~d~~-- 344 (511)
T PRK13391 275 SSLE---VAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGRAM-FG--DLHILDDD-- 344 (511)
T ss_pred ccee---EEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCCcc-cc--eEEEECCC--
Confidence 4677 5666662 55667777878 47788 99999997532211111 1 112233322 22 34554432
Q ss_pred CcccccccCCCccccccccCCCceEEEEEccc--ccee---------------ccccCCEEEEeceeCCCCEEEEEeeeC
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--AGLY---------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~--~Gl~---------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 429 (579)
+. .++.|+.|||++.+. .|+| +|+|||+++.+. ...+.|+||.+
T Consensus 345 ----------~~-----~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~gR~~ 405 (511)
T PRK13391 345 ----------GA-----ELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTDRAA 405 (511)
T ss_pred ----------CC-----CCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEeccCC
Confidence 22 346799999999773 3443 689999999875 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 008068 430 LLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 430 d~i~~~Gekv~e~~v~~av~~~ 451 (579)
|+++++|+++++.+|++++.+.
T Consensus 406 ~~i~~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 406 FMIISGGVNIYPQEAENLLITH 427 (511)
T ss_pred CEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.87 E-value=2.7e-07 Score=99.48 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=41.1
Q ss_pred ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 403 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
+|+|||+++.+. .+.+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 276 ~~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 478999999875 689999999999999999999999999999864
No 124
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.81 E-value=1e-07 Score=114.46 Aligned_cols=146 Identities=7% Similarity=-0.004 Sum_probs=91.8
Q ss_pred CCCCceeeEEeecCh-HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCcccccceecCCceEEEEEeCCCCCc-c
Q 008068 292 FPNAKYLSGIMTGSM-EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL-E 369 (579)
Q Consensus 292 wP~l~~i~~~~~g~~-~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~-~ 369 (579)
.++++ .+.+|++ ....+++.+.+++++++ +.||+||+.+.+...+...++..|..+ |+..-++..+.+ .. +
T Consensus 719 ~~slr---~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~p~-pg~~~v~i~~~d--~~~g 791 (994)
T PRK07868 719 NHPVR---LFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGRPL-PGAGRVELAAYD--PEHD 791 (994)
T ss_pred CCceE---EEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCCcc-CCCCceeEEEec--CcCC
Confidence 34677 4445554 55566777888778999 999999985432211111222244432 332123332211 00 0
Q ss_pred cccccCCCccccccccCCCceEEEEEccc----------cce-----eccccCCEEEEeceeCCCCEEEEEeeeCceEee
Q 008068 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTNV----------AGL-----YRYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 434 (579)
Q Consensus 370 ~~~~~~~~~~l~~~eve~G~~yeLVvTt~----------~Gl-----~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~ 434 (579)
.-.-++++. ..++++|+.|||++... .|+ =+|+|||+++++. .+.+.|+||.+|+|++
T Consensus 792 ~li~d~~G~---~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~----dG~l~~~GR~dd~Ik~ 864 (994)
T PRK07868 792 LILEDDRGF---VRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDD----DGDYWLVDRRGSVIRT 864 (994)
T ss_pred ceeecCCce---EEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcC----CCCEEEeccCCCEEEe
Confidence 000000110 02467899999998642 222 3699999999985 7899999999999999
Q ss_pred ceeecCHHHHHHHHHHH
Q 008068 435 NIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 435 ~Gekv~e~~v~~av~~~ 451 (579)
+|++|++.|||++|.+.
T Consensus 865 ~G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 865 ARGPVYTEPVTDALGRI 881 (994)
T ss_pred CCceEcHHHHHHHHhcC
Confidence 99999999999999864
No 125
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.80 E-value=2e-07 Score=102.95 Aligned_cols=129 Identities=9% Similarity=0.065 Sum_probs=87.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-CC--CcccccceecCCceEEEEEeCCCC
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-SL--PPELATFAVLPNIGYFEFIPQRLG 366 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~~~~~-~~--~~~~~~~~l~~~~~~~Efip~~~~ 366 (579)
++++ .+++||. ....+.+++++ +.+++ ..||+||+......+. .. ..+..|.. .++ . ++.++.+
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~g-~-~~i~d~~-- 339 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGRS-VLG-D-LHICDDD-- 339 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccCceEEecchhhccCCCCcCCc-ccc-e-EEEECCC--
Confidence 4677 6666663 44556667777 47888 9999999742211111 11 11112332 222 2 3444322
Q ss_pred CcccccccCCCccccccccCCCceEEEEEccc---ccee----------------ccccCCEEEEeceeCCCCEEEEEee
Q 008068 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------------RYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 367 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------------RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
++ .+++|+.|||+|.+. .||| +|+|||+++++. ...+.|.||
T Consensus 340 ----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR 400 (501)
T PRK13390 340 ----------GN-----ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADR 400 (501)
T ss_pred ----------CC-----CCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeec
Confidence 23 356899999999763 4453 679999999985 679999999
Q ss_pred eCceEeeceeecCHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDE 450 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~ 450 (579)
.+++++++|++|++.+||++|..
T Consensus 401 ~~~~i~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 401 KSFMIISGGVNIYPQETENALTM 423 (501)
T ss_pred cccceeECCeeeCHHHHHHHHHh
Confidence 99999999999999999999964
No 126
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.77 E-value=2.6e-07 Score=102.14 Aligned_cols=133 Identities=14% Similarity=0.071 Sum_probs=86.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCCCcccccceecCCceEEEEEeCCCCCc
Q 008068 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368 (579)
Q Consensus 293 P~l~~i~~~~~g~~---~~~~~~l~~~~g~v~v~~~~YgaSEg~i-~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~ 368 (579)
++++ .+.+||. ....+++++.+++++++ +.||+||... +......++....+-...+ +.-+++++.+
T Consensus 296 ~~l~---~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~-~~~~~i~~~~---- 366 (533)
T PRK07798 296 SSLF---AIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTI-GPRTVVLDED---- 366 (533)
T ss_pred CceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCC-CceEEEECCC----
Confidence 4677 6777773 55556677777778898 9999999633 3221111111111101112 2234444432
Q ss_pred ccccccCCCccccccccCCCce--EEEEEccc--cc-----------------eeccccCCEEEEeceeCCCCEEEEEee
Q 008068 369 ESQVLCIEPKPVGLTEVKVGEE--YEIIVTNV--AG-----------------LYRYRLGDVVKVMGFHNSTPELKFICR 427 (579)
Q Consensus 369 ~~~~~~~~~~~l~~~eve~G~~--yeLVvTt~--~G-----------------l~RYr~GDvv~v~~~~~~~P~i~f~gR 427 (579)
+. ++++|+. ++++.+.. .| -.+|+|||+++++. ...+.|+||
T Consensus 367 --------~~-----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR 429 (533)
T PRK07798 367 --------GN-----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGR 429 (533)
T ss_pred --------CC-----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEcc
Confidence 22 2345666 78877552 22 23689999999985 678999999
Q ss_pred eCceEeeceeecCHHHHHHHHHHH
Q 008068 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 428 ~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.+++++++|++|++.+||+++.+.
T Consensus 430 ~~~~i~~~G~~v~~~eIE~~l~~~ 453 (533)
T PRK07798 430 GSVCINTGGEKVFPEEVEEALKAH 453 (533)
T ss_pred ccceEecCCEEeCHHHHHHHHHhC
Confidence 999999999999999999998753
No 127
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.69 E-value=7.8e-07 Score=96.33 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcc-cceecCCCCCC-
Q 008068 268 PELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEG-WIGANVNPSLP- 343 (579)
Q Consensus 268 p~~A~~L~~~~~~~~g~~g~~~~lwP~l~~i~~~~~g~~--~~~~~~l~~~~g~v~v~~~~YgaSEg-~i~~~~~~~~~- 343 (579)
--..+.+++..+. +|| -+.+||+ .+-.+++-..+=.+|+. .+||-||. ..+.-.++++-
T Consensus 390 ~lVFkKIr~~lGG-------------~lR---~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~ 452 (678)
T KOG1180|consen 390 ALVFKKIRALLGG-------------NLR---YILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFS 452 (678)
T ss_pred HHHHHHHHHHhCC-------------ceE---EEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcc
Confidence 3456666666431 678 7788886 33334444433246999 99999995 44444455442
Q ss_pred cccccceecCCceEEEEEeCCCCCcccccccCCCccccccccCCCceEEEEEcc---cccee-----------------c
Q 008068 344 PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------R 403 (579)
Q Consensus 344 ~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------R 403 (579)
.+.+|-++ ..+.+-.++.+ +.+ ..+. . .+ =.|||+|+. ..||| |
T Consensus 453 ~g~vG~pl--~c~eiKLvdw~--EgG-----Y~~~-----~-~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~W 516 (678)
T KOG1180|consen 453 TGRVGAPL--PCCEIKLVDWE--EGG-----YFAK-----N-KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRW 516 (678)
T ss_pred cccccCCc--cceEEEEEEhh--hcC-----ccCC-----C-CC-CCceEEecCCccChhhhCChhhhhhhceecCCcEE
Confidence 22233322 22455555554 322 1111 0 11 257999966 35666 7
Q ss_pred cccCCEEEEeceeCCCCEEEEEeeeCceEee-ceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCC
Q 008068 404 YRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLS 472 (579)
Q Consensus 404 Yr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~-~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~ 472 (579)
|+||||++++. .+++++++|++|++++ +||-|+=.-||.++... --+-+.|+++|..
T Consensus 517 F~TGDIGe~~p----dG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~--------p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 517 FRTGDIGEFHP----DGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSS--------PYVDNICVYADSN 574 (678)
T ss_pred EeccccceecC----CCcEEEeechhhhhhhcccceeehHHHHHHHhcC--------cchhheEEecccc
Confidence 99999999995 7899999999999886 59999999999888743 1234678888854
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.46 E-value=6.2e-06 Score=88.04 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHH-cCCChhhHhc----CCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCccC--CCcceeec
Q 008068 25 ERIQRETLRKILEE-NASAEYLQNL----GLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTG--KPITTISR 97 (579)
Q Consensus 25 ~~~Q~~~L~~iL~~-~~~T~ygr~~----gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll~~--~pi~~f~~ 97 (579)
++...+.++++.+. .++++.||++ |++ .+++++. .+|.+--.-++. ..|.+. +.+.....
T Consensus 30 ~~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~~-dIP~lPi~~FK~----------~~L~S~~~e~~~~~~t 96 (365)
T PF04443_consen 30 EELFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDLE-DIPFLPIRFFKE----------HELLSVPEEEVEKVFT 96 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccHH-HCCcchHHHHhh----------ceeeecChhhheeEEE
Confidence 34455566666665 7999999996 666 5666765 588877666663 223322 34567789
Q ss_pred ccccCCCCcccccCChHHHHH
Q 008068 98 SSGTTQGKPKFLPFNDELMET 118 (579)
Q Consensus 98 TSGTT~G~~K~iP~t~~~l~~ 118 (579)
||||| |.+-.|.........
T Consensus 97 SSGTt-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 97 SSGTT-GQPSRIFRDRETAER 116 (365)
T ss_pred CCCCC-CCCcEEEECHHHHHH
Confidence 99999 777677776655543
No 129
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.16 E-value=6.5e-05 Score=82.07 Aligned_cols=222 Identities=15% Similarity=0.152 Sum_probs=132.8
Q ss_pred HHHHHHHHHHhCCCCeeccccccCccccee-cCCCCCCcccccce--ecCCceEEEEEeCCCCCc-ccccccCCCccccc
Q 008068 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPSLPPELATFA--VLPNIGYFEFIPQRLGNL-ESQVLCIEPKPVGL 382 (579)
Q Consensus 307 ~~~~~~l~~~~g~v~v~~~~YgaSEg~i~~-~~~~~~~~~~~~~~--l~~~~~~~Efip~~~~~~-~~~~~~~~~~~l~~ 382 (579)
++..+.+.+.|| ++..++.||+|||.+++ |.+...-+ .|+. +.....=|+.|-.| +. ++...++++--
T Consensus 369 ~diW~~Fv~RFg-~~~IgE~YgaTEgn~~~~N~d~~vGA--~G~~~~~~~~l~p~~LIk~D--~~t~E~iRd~~G~C--- 440 (649)
T KOG1179|consen 369 PDIWQQFVKRFG-IIKIGEFYGATEGNSNLVNYDGRVGA--CGFMSRLLKLLYPFRLIKVD--PETGEPIRDSQGLC--- 440 (649)
T ss_pred chHHHHHHHHcC-CCeEEEEeccccCcceeeeecCcccc--ccchhhhhhhccceEEEEec--CCCCceeecCCceE---
Confidence 444455778895 55445999999996644 44433211 1221 11111125666554 21 11111122221
Q ss_pred cccCCCceEEEEEc--------ccccee--------------------ccccCCEEEEeceeCCCCEEEEEeeeCceEee
Q 008068 383 TEVKVGEEYEIIVT--------NVAGLY--------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 434 (579)
Q Consensus 383 ~eve~G~~yeLVvT--------t~~Gl~--------------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~ 434 (579)
..+++||.|.||-. .+.||- .|+|||+...+. -..+.|.+|.+|...-
T Consensus 441 i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DRtGDTFRW 516 (649)
T KOG1179|consen 441 IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDRTGDTFRW 516 (649)
T ss_pred EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEeccCCCceee
Confidence 25689999977642 233332 499999999996 6899999999999999
Q ss_pred ceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh
Q 008068 435 NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR 513 (579)
Q Consensus 435 ~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R 513 (579)
.||||+-.|||+.+..... + .++.-|-+..+ .+++.+-=.+. . .+..+-+++.+...+...| |.|+.=|
T Consensus 517 KGENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~--~-~p~~~~d~~~l~~~l~~~L--P~YA~P~ 586 (649)
T KOG1179|consen 517 KGENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIV--L-DPTTEKDLEKLYQHLRENL--PSYARPR 586 (649)
T ss_pred cCCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEE--e-cCcccchHHHHHHHHHhhC--ccccchH
Confidence 9999999999998876532 1 12333444333 23332322222 2 1223335556666676665 7777766
Q ss_pred hcCCcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCccc
Q 008068 514 KVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCV 554 (579)
Q Consensus 514 ~~~~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~ 554 (579)
......-.+ .-|||..-....++.|-..++++-|--+
T Consensus 587 FlRl~~~i~----~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 587 FLRLQDEIE----KTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HHHHHhhhh----cccchhhHHHHHHHccCCccccCCceEE
Confidence 554333333 4599997776677789899999988753
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.45 E-value=0.0047 Score=70.66 Aligned_cols=63 Identities=17% Similarity=0.358 Sum_probs=51.1
Q ss_pred ccCCCceEEEEEccc---ccee--------------ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHH
Q 008068 384 EVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 446 (579)
Q Consensus 384 eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~ 446 (579)
.+..|..+|+.|+.. .||+ .|+|||+++-. ....++|+||.++.+++.|..+-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 446688899999773 4433 39999999944 36799999999999999999998899988
Q ss_pred HHHH
Q 008068 447 SVDE 450 (579)
Q Consensus 447 av~~ 450 (579)
++..
T Consensus 637 ~l~~ 640 (642)
T COG1020 637 ALAE 640 (642)
T ss_pred HHhc
Confidence 7753
No 131
>PTZ00297 pantothenate kinase; Provisional
Probab=96.42 E-value=0.052 Score=67.59 Aligned_cols=56 Identities=9% Similarity=0.077 Sum_probs=39.2
Q ss_pred eEEEEEccccceeccccCCEEEEeceeCCCCEEEEEeeeCceEee-ceeecCHHHHHHHHHH
Q 008068 390 EYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDE 450 (579)
Q Consensus 390 ~yeLVvTt~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~-~Gekv~e~~v~~av~~ 450 (579)
.|||++... +- .-.|+++ ++++. ..+.+.++||.+++++. .||+|+++.||+.+..
T Consensus 825 ~GEIlvr~~-kd-pe~T~e~--~~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLAKK-GE-PRRTLPI--AAQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEEEC-CC-hHHHHHh--hCcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 488888311 00 1236664 23443 46799999999999776 5899999999998854
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.79 E-value=0.0093 Score=51.35 Aligned_cols=82 Identities=12% Similarity=0.053 Sum_probs=51.0
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCC--HHHHHHHHHHHHHhccChhhHHHh
Q 008068 436 IDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVN--DEVLKECCNCLDRSFVDAGYVSAR 513 (579)
Q Consensus 436 Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~--~~~l~~~~~~ld~~L~n~~Y~~~R 513 (579)
|.||+|.+|+++|.+. + ++. .+|.+........-...+.||...+.. ....+.+++.+.++|
T Consensus 1 GvnvfP~~Ie~vl~~~-~-----~~~-~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~l--------- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P-----EVS-PEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERL--------- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T-----TEE-EEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHH---------
T ss_pred CcEECHHHHHHHHHhC-c-----CCC-CcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHH---------
Confidence 7899999999999875 2 221 278877654333346668899866532 245666777777766
Q ss_pred hcCCcCCeEEEEeccchHHH
Q 008068 514 KVNAIGPLELRVVLKGTFQQ 533 (579)
Q Consensus 514 ~~~~l~p~~v~~v~~gtf~~ 533 (579)
+...--.++|++|++|++.+
T Consensus 65 k~~lgv~~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 KERLGVRPEVELVPPGTLPR 84 (96)
T ss_dssp HHHHSS-EEEEEE-TT-S--
T ss_pred HhhcCceEEEEEECCCCccC
Confidence 22222345999999999986
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=95.13 E-value=0.13 Score=55.17 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=34.1
Q ss_pred ccccCCEEEEeceeCCCCEEEEEeeeCceEeece---eecCHHHHHHHHHHH
Q 008068 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINI---DKNTEKDLQLSVDEA 451 (579)
Q Consensus 403 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~G---ekv~e~~v~~av~~~ 451 (579)
||+|||++++.+ ..+.+.|+||.+ +| ++|++. ||+++.+.
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhC
Confidence 899999999842 268899999998 78 899999 99888764
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=75.25 E-value=5.7 Score=48.00 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=41.0
Q ss_pred ccccCCEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHH
Q 008068 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (579)
Q Consensus 403 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~ 451 (579)
.|||||.++..- ..-++|.||.++.++++|-++.=.++..++...
T Consensus 455 ~y~tgD~gr~l~----ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSLK----NGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceeec----CCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 499999999884 678999999999999999999999999998875
No 135
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=58.54 E-value=53 Score=39.94 Aligned_cols=127 Identities=20% Similarity=0.149 Sum_probs=79.9
Q ss_pred ccCCCceEEEEEccccc---------------------------eeccccCCEEEEeceeC------CCCEEEEEeeeCc
Q 008068 384 EVKVGEEYEIIVTNVAG---------------------------LYRYRLGDVVKVMGFHN------STPELKFICRRNL 430 (579)
Q Consensus 384 eve~G~~yeLVvTt~~G---------------------------l~RYr~GDvv~v~~~~~------~~P~i~f~gR~~d 430 (579)
....|+.||+++.+.++ .-+=||||++-+....+ ..+.+-++|=.+.
T Consensus 1174 pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~E 1253 (1363)
T KOG3628|consen 1174 PCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDE 1253 (1363)
T ss_pred ccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccc
Confidence 45679999999966433 22468999874443332 2467889999999
Q ss_pred eEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHH-HHHHHHHHHhccChhh
Q 008068 431 LLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVL-KECCNCLDRSFVDAGY 509 (579)
Q Consensus 431 ~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l-~~~~~~ld~~L~n~~Y 509 (579)
-+-++|=.-++.+||+.|.++-+.. .|+.+ |+ -.+.-|+.+|..+.....++ .-..+. .| +.|
T Consensus 1254 tlEl~GL~h~p~DIE~TV~~vH~~I--~~cav--F~-------~~glvVvviE~~gq~~~~~LvPlIv~~---vL-~eH- 1317 (1363)
T KOG3628|consen 1254 TLELNGLRHFPSDIETTVERVHPSI--GGCAV--FQ-------ATGLVVVVIECHGQQELADLVPLIVNV---VL-EEH- 1317 (1363)
T ss_pred eeeecCcccCcchHHHHHHHhcccc--cceee--Ee-------eCCeEEEEEEecCchhHhhhhHHHHHH---HH-hhc-
Confidence 9999999999999999999885522 12111 22 13567889998663221111 111111 22 222
Q ss_pred HHHhhcCCcCCeEEEEeccchHHH
Q 008068 510 VSARKVNAIGPLELRVVLKGTFQQ 533 (579)
Q Consensus 510 ~~~R~~~~l~p~~v~~v~~gtf~~ 533 (579)
+.|. =-|.+|++|+|.+
T Consensus 1318 ------~iI~-dvV~fV~~G~~p~ 1334 (1363)
T KOG3628|consen 1318 ------YIIL-DVVAFVDKGVFPR 1334 (1363)
T ss_pred ------ceEE-EEEEEecCCcccc
Confidence 2232 3478899999874
No 136
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=58.45 E-value=58 Score=27.66 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhc
Q 008068 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSF 504 (579)
Q Consensus 441 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L 504 (579)
+..+..++..+.. .|+.+......+. ...++.|.+|||+.+. ..+.++.+.+.|.+.+
T Consensus 25 pGsL~~vL~~Fa~----~~INLt~IeSRP~-~~~~~~Y~FfVDieg~-~~~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFEE----KDINLTHIESRPS-RLNKDEYEFFINLDKK-SAPALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHHH----CCCCEEEEEeccC-CCCCceEEEEEEEEcC-CCHHHHHHHHHHHHHh
Confidence 4457677766544 6888877766553 2345789999999765 3345555556666654
No 137
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=56.90 E-value=11 Score=43.02 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=22.4
Q ss_pred CCcceeecccccCCCCcccccCChHHHH
Q 008068 90 KPITTISRSSGTTQGKPKFLPFNDELME 117 (579)
Q Consensus 90 ~pi~~f~~TSGTT~G~~K~iP~t~~~l~ 117 (579)
+.+.+...||||| |+||-+..|...+.
T Consensus 193 ~d~a~i~yTSGTT-G~PKgV~~sh~~l~ 219 (612)
T PRK12476 193 DDVSHLQYTSGST-RPPVGVEITHRAVG 219 (612)
T ss_pred CceEEEEeCCCCC-CCCceEEeeHHHHH
Confidence 4455888899999 99999999987664
No 138
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=48.69 E-value=89 Score=27.17 Aligned_cols=102 Identities=11% Similarity=0.152 Sum_probs=54.8
Q ss_pred EEEeeeCceEeeceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 008068 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 423 ~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
.++-|.+.--.+..+. ..+.+.+.+...+. ..++.+.+|++.+| |+.++++..++. .+.++...+..
T Consensus 7 hiv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~~~~---~is~~~~~lK~ 73 (121)
T PF01797_consen 7 HIVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIPPKQ---SISKFMQRLKG 73 (121)
T ss_dssp EEEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE-TTS----HHHHHHHHHH
T ss_pred EEEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeecccc---cchheeecccc
Confidence 3444444433334444 45566677766665 57999999998755 999999985442 34444444444
Q ss_pred hc---cChhhHHHhhc----CCc--CCeEEEEeccchHHHHHHH
Q 008068 503 SF---VDAGYVSARKV----NAI--GPLELRVVLKGTFQQILDH 537 (579)
Q Consensus 503 ~L---~n~~Y~~~R~~----~~l--~p~~v~~v~~gtf~~~~~~ 537 (579)
.. .|..|...... |.+ ..--...+....+....++
T Consensus 74 ~~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~Y 117 (121)
T PF01797_consen 74 RSSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRY 117 (121)
T ss_dssp HHHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHH
T ss_pred cccccccccccceecccccccccccCCeEEEEECChhHHHHHHH
Confidence 21 24333333211 222 2344556666566655543
No 139
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=43.90 E-value=1.5e+02 Score=23.45 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 008068 442 KDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 442 ~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
..+..++..+. ..|+.+......+. ...++.|.+|+|+.+..+....+.+.+.|.+
T Consensus 11 G~L~~vL~~f~----~~~vni~~I~Srp~-~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~ 66 (75)
T cd04880 11 GALAKALKVFA----ERGINLTKIESRPS-RKGLWEYEFFVDFEGHIDDPDVKEALEELKR 66 (75)
T ss_pred CHHHHHHHHHH----HCCCCEEEEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 34555555443 47888877765543 2346889999999765344455555555544
No 140
>PRK07798 acyl-CoA synthetase; Validated
Probab=41.46 E-value=13 Score=40.94 Aligned_cols=23 Identities=30% Similarity=0.345 Sum_probs=19.7
Q ss_pred eeecccccCCCCcccccCChHHHH
Q 008068 94 TISRSSGTTQGKPKFLPFNDELME 117 (579)
Q Consensus 94 ~f~~TSGTT~G~~K~iP~t~~~l~ 117 (579)
+...||||| |.||-+..|...+.
T Consensus 167 ~i~~TSGTT-G~PK~v~~s~~~~~ 189 (533)
T PRK07798 167 YLLYTGGTT-GMPKGVMWRQEDIF 189 (533)
T ss_pred EEEECCCCC-CCCcEEEEecHHHH
Confidence 667799999 99999999987653
No 141
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=40.60 E-value=16 Score=41.24 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=21.8
Q ss_pred CCCce----EEEEEcccccee--ccccCCEEEEecee
Q 008068 386 KVGEE----YEIIVTNVAGLY--RYRLGDVVKVMGFH 416 (579)
Q Consensus 386 e~G~~----yeLVvTt~~Gl~--RYr~GDvv~v~~~~ 416 (579)
+.|.. |-|++-.--|++ +=||||..|=.|..
T Consensus 484 kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 484 KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGEN 520 (649)
T ss_pred ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCc
Confidence 56764 456666667743 67999999988753
No 142
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=37.67 E-value=87 Score=29.03 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=37.3
Q ss_pred cCCCceEEEEEcc--ccceecc----ccCCEEEEeceeCCCCEEEEEeee----CceEeeceeecCHH
Q 008068 385 VKVGEEYEIIVTN--VAGLYRY----RLGDVVKVMGFHNSTPELKFICRR----NLLLTINIDKNTEK 442 (579)
Q Consensus 385 ve~G~~yeLVvTt--~~Gl~RY----r~GDvv~v~~~~~~~P~i~f~gR~----~d~i~~~Gekv~e~ 442 (579)
|++|+.-+|.||. ++|.+++ ..+|+=.|.+. -.|+|.|.+.. +.+|.-+-|+++..
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkdi--~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm 112 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKDI--YPPRIELSYTLTDADGKVIKQGEEKLKDM 112 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEccC--CCCcEEEEEEEECCCCcEEEecceEEecc
Confidence 7899999999999 5997765 44565444444 35888777664 34455555555543
No 143
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=36.12 E-value=34 Score=26.21 Aligned_cols=19 Identities=26% Similarity=0.714 Sum_probs=15.4
Q ss_pred cccCCEEEEeceeCCCCEEEEE
Q 008068 404 YRLGDVVKVMGFHNSTPELKFI 425 (579)
Q Consensus 404 Yr~GDvv~v~~~~~~~P~i~f~ 425 (579)
|.+||+|+..+ ..|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999997 57877665
No 144
>COG5475 Uncharacterized small protein [Function unknown]
Probab=35.90 E-value=39 Score=26.07 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=20.3
Q ss_pred cccCCEEEEeceeCCCCEEEEEeeeCc
Q 008068 404 YRLGDVVKVMGFHNSTPELKFICRRNL 430 (579)
Q Consensus 404 Yr~GDvv~v~~~~~~~P~i~f~gR~~d 430 (579)
|.|||+|++.. ..|++.+.|=..|
T Consensus 5 FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEeec---CCceEEEeccccC
Confidence 78999999997 6899988887664
No 145
>PRK11899 prephenate dehydratase; Provisional
Probab=34.02 E-value=3e+02 Score=28.47 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 008068 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 441 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
+..+..+|..+.. .|+.+.-....+. ...++.|.+|+|+.+....+..+...+.|.+
T Consensus 205 pGaL~~vL~~Fa~----~gINLtkIeSRP~-~~~~~~Y~F~id~eg~~~d~~v~~aL~~l~~ 261 (279)
T PRK11899 205 PAALYKALGGFAT----NGVNMTKLESYMV-GGSFTATQFYADIEGHPEDRNVALALEELRF 261 (279)
T ss_pred CChHHHHHHHHHH----cCCCeeeEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4567777776654 6887776666653 3457899999999776443444444444443
No 146
>PF12401 DUF3662: Protein of unknown function (DUF2662) ; InterPro: IPR022128 This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with PF00498 from PFAM. ; PDB: 2LC0_A.
Probab=32.18 E-value=56 Score=29.12 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=38.0
Q ss_pred eceeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh
Q 008068 434 INIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR 513 (579)
Q Consensus 434 ~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R 513 (579)
+.+-.|-+.||..++.+.+.. ++. .+..+..--|-+|++.+-. . +-+.+..+...|.+.|...-.+.++
T Consensus 19 ~F~~~vqPvEIa~~L~remd~----~a~----~~~~~r~~aPN~y~V~Ls~--~-D~~~l~~~~~~l~~el~~~l~~~a~ 87 (116)
T PF12401_consen 19 VFRSEVQPVEIAKALRREMDD----QAR----VVSRGRTLAPNVYTVELSP--E-DYERLSPWGDRLARELADYLAEHAR 87 (116)
T ss_dssp HHTTSS-THHHHHHHHHHHHH----T-B-------TT--B---EEEEEEEH--H-HHHHH-S-SHHHHHHHHHHHHHHHH
T ss_pred hcCCCCcHHHHHHHHHHHHHh----CCe----ecCCCCEEcCeeEEEEECH--H-HHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 345568899999999998762 211 1111111135688855522 1 1111111112333333222233344
Q ss_pred hcC--CcCCeEEEEeccch
Q 008068 514 KVN--AIGPLELRVVLKGT 530 (579)
Q Consensus 514 ~~~--~l~p~~v~~v~~gt 530 (579)
..| ..+|+.|++.....
T Consensus 88 ~qgy~~~G~v~V~~~~d~~ 106 (116)
T PF12401_consen 88 EQGYTFVGPVTVEFEEDPD 106 (116)
T ss_dssp HHT-B-SS--EEEEEEETT
T ss_pred HCCCeecCCEEEEEEECCC
Confidence 444 68999999987654
No 147
>PRK11898 prephenate dehydratase; Provisional
Probab=31.32 E-value=3.1e+02 Score=28.36 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 008068 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 441 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
+..+..+|.-+.. .|+.+...-..+ ....++.|.+|+|+.+..+.+.++...+.|.+
T Consensus 208 pGsL~~~L~~F~~----~~INLt~IeSRP-~~~~~~~y~F~vd~eg~~~~~~~~~al~~L~~ 264 (283)
T PRK11898 208 PGALYKALSEFAW----RGINLTRIESRP-TKTGLGTYFFFIDVEGHIDDVLVAEALKELEA 264 (283)
T ss_pred ccHHHHHHHHHHH----CCCCeeeEeccc-CCCCCccEEEEEEEEccCCCHHHHHHHHHHHH
Confidence 4567777766644 688777666654 33356789999999766554445555444543
No 148
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=31.08 E-value=2.6e+02 Score=22.37 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHH
Q 008068 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLD 501 (579)
Q Consensus 441 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld 501 (579)
+..+.+++..+. ..|+.+...-..+- ...++.|.+|||+.+. + +..+.+.+.|.
T Consensus 11 pG~L~~vL~~f~----~~~iNlt~IeSRP~-~~~~~~y~Ffvd~~~~-~-~~~~~~l~~L~ 64 (74)
T cd04904 11 VGALARALKLFE----EFGVNLTHIESRPS-RRNGSEYEFFVDCEVD-R-GDLDQLISSLR 64 (74)
T ss_pred CcHHHHHHHHHH----HCCCcEEEEECCCC-CCCCceEEEEEEEEcC-h-HHHHHHHHHHH
Confidence 345666666554 36887776665543 3456889999999762 2 23444444443
No 149
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=29.55 E-value=3e+02 Score=22.11 Aligned_cols=55 Identities=22% Similarity=0.253 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 008068 443 DLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 443 ~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
.+.+++.-+. +.|+.+......+. ......|.++++.....+.+.++.+.+.|++
T Consensus 14 ~L~~il~~f~----~~~ini~~i~s~p~-~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~ 68 (80)
T cd04905 14 ALYDVLGVFA----ERGINLTKIESRPS-KGGLWEYVFFIDFEGHIEDPNVAEALEELKR 68 (80)
T ss_pred HHHHHHHHHH----HCCcCEEEEEEEEc-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4544444433 46887776665544 2345779999998765344455555555554
No 150
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=27.34 E-value=45 Score=28.92 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=25.9
Q ss_pred eccccCCEEEEecee---CCCCEEEEEeeeCceEeecee
Q 008068 402 YRYRLGDVVKVMGFH---NSTPELKFICRRNLLLTINID 437 (579)
Q Consensus 402 ~RYr~GDvv~v~~~~---~~~P~i~f~gR~~d~i~~~Ge 437 (579)
--|+.||.|-+..-. .+.|.=.|.||++-++++.|.
T Consensus 33 ~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 33 QEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred HhccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 348899998877532 256777788888888877763
No 151
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=27.33 E-value=3.9e+02 Score=27.69 Aligned_cols=56 Identities=23% Similarity=0.386 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHH
Q 008068 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLD 501 (579)
Q Consensus 441 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld 501 (579)
+..+..++..++ +.|+.+.-.-+.+ ....++.|.+|||+.+..+....+...+.|.
T Consensus 205 PGaL~~~L~~Fa----~~gINlTkIESRP-~k~~~~~Y~F~iD~eg~~~~~~v~~AL~el~ 260 (279)
T COG0077 205 PGALYKALGVFA----KRGINLTKIESRP-LKTGLGEYLFFIDIEGHIDDPLVKEALEELK 260 (279)
T ss_pred CchHHHHHHHHH----HcCcceeeEeecc-cCCCCeeEEEEEEEecCcCcHhHHHHHHHHH
Confidence 445656665553 4677665444443 3346789999999977655444444434443
No 152
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=26.44 E-value=50 Score=28.42 Aligned_cols=36 Identities=22% Similarity=0.467 Sum_probs=21.4
Q ss_pred eeccccCCEEEEe---ceeCCCCEEEEEeeeCceEeece
Q 008068 401 LYRYRLGDVVKVM---GFHNSTPELKFICRRNLLLTINI 436 (579)
Q Consensus 401 l~RYr~GDvv~v~---~~~~~~P~i~f~gR~~d~i~~~G 436 (579)
|.-|..||.|-++ .++...|-=+|.||++.++...|
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g 68 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRG 68 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccC
Confidence 3457777777665 23334566667777766665554
No 153
>PRK13390 acyl-CoA synthetase; Provisional
Probab=26.08 E-value=33 Score=37.67 Aligned_cols=19 Identities=42% Similarity=0.441 Sum_probs=15.7
Q ss_pred ceeecccccCCCCcccccCC
Q 008068 93 TTISRSSGTTQGKPKFLPFN 112 (579)
Q Consensus 93 ~~f~~TSGTT~G~~K~iP~t 112 (579)
.+...||||| |.||-+..+
T Consensus 151 a~i~~TSGTT-G~PKgV~~~ 169 (501)
T PRK13390 151 AVMLYSSGTT-GFPKGIQPD 169 (501)
T ss_pred EEEEeCCCCC-CCCCEEEee
Confidence 4677899999 999998743
No 154
>cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Probab=25.42 E-value=3.1e+02 Score=24.55 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=35.2
Q ss_pred CEEEEeceeCCCCEEEEEeeeCceEeeceeecCHHHHHHHHHHHHH
Q 008068 408 DVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQ 453 (579)
Q Consensus 408 Dvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~av~~~~~ 453 (579)
+-+++.|+-. .|.+. .+|...++=++|.-|....+..||.++-.
T Consensus 30 ~~~~i~G~is-~p~~~-~~~~~q~~fVNgR~V~~~~l~~aI~~~Y~ 73 (127)
T cd03483 30 LGFKVKGLIS-NANYS-KKKIIFILFINNRLVECSALRRAIENVYA 73 (127)
T ss_pred CcEEEEEEEc-Cchhc-CCCceEEEEEcCCEecCHHHHHHHHHHHH
Confidence 4578888763 46665 66777789999999999999999999866
No 155
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=25.39 E-value=57 Score=30.79 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=24.8
Q ss_pred ccccCCEEEEece---eCCCCEEEEEeeeCceEeece
Q 008068 403 RYRLGDVVKVMGF---HNSTPELKFICRRNLLLTINI 436 (579)
Q Consensus 403 RYr~GDvv~v~~~---~~~~P~i~f~gR~~d~i~~~G 436 (579)
-|+.||+|-+..- +.+.|.=.|.||++-+.++.|
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~ 69 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTP 69 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 4888888877752 235677778888887777765
No 156
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=25.23 E-value=42 Score=33.51 Aligned_cols=48 Identities=19% Similarity=0.387 Sum_probs=31.4
Q ss_pred ccCCCcceeecccccCCCCcccccCC-hH-HHHHHHHHHHHHHHHHhccCC
Q 008068 87 LTGKPITTISRSSGTTQGKPKFLPFN-DE-LMETTLQIFRTSYAFRNREFP 135 (579)
Q Consensus 87 l~~~pi~~f~~TSGTT~G~~K~iP~t-~~-~l~~~~~~~~~~~~~l~~~~p 135 (579)
|..-.+..|.+|||++ |-.-++|.. .. .......+...+...+.+..|
T Consensus 122 L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~fa~~iA~~l~~~~P 171 (223)
T cd04866 122 LDALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRLFTEFIAEYLCQQFP 171 (223)
T ss_pred HHHcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 3334567899999999 999999999 43 233333333344555666677
No 157
>cd04861 LigD_Pol_like LigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. PaeLigD is monomeric, containing an N-terminal phosphoesterase module, a central polymerase (Pol) domain, and a C-terminal ATP-dependent ligase domain. Mycobacterium tuberculosis (Mt)LigD, also found in this group, is monomeric and contains the same modules but these are arranged differently: an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase do
Probab=23.09 E-value=50 Score=33.12 Aligned_cols=46 Identities=13% Similarity=0.257 Sum_probs=31.8
Q ss_pred CCCcceeecccccCCCCcccccCChHH-HHHHHHHHHHHHHHHhccCC
Q 008068 89 GKPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFRNREFP 135 (579)
Q Consensus 89 ~~pi~~f~~TSGTT~G~~K~iP~t~~~-l~~~~~~~~~~~~~l~~~~p 135 (579)
.-.+..|.+|||++ |-.-++|..... ......+...+...+.+.+|
T Consensus 129 ~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~fa~~iA~~l~~~~P 175 (227)
T cd04861 129 ELGLESFPKTSGGK-GLHVYVPLAPRYTWDEVRAFAKALARELARRLP 175 (227)
T ss_pred HcCCccceEccCCC-eEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 34567899999999 999999999643 33333333444556677777
No 158
>TIGR02778 ligD_pol DNA polymerase LigD, polymerase domain. DNA repair of double-stranded breaks by non-homologous end joining (NHEJ) is accomplished by a two-protein system that is present in a minority of prokaryotes. One component is the Ku protein (see TIGR02772), which binds DNA ends. The other is a DNA ligase, a protein that is a multidomain polypeptide in most of those bacteria that have NHEJ, a permuted polypeptide in Mycobacterium tuberculosis and a few other species, and the product of tandem genes in some other bacteria. This model represents the polymerase domain.
Probab=22.99 E-value=51 Score=33.44 Aligned_cols=48 Identities=15% Similarity=0.299 Sum_probs=32.3
Q ss_pred ccCCCcceeecccccCCCCcccccCChHH-HHHHHHHHHHHHHHHhccCC
Q 008068 87 LTGKPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFRNREFP 135 (579)
Q Consensus 87 l~~~pi~~f~~TSGTT~G~~K~iP~t~~~-l~~~~~~~~~~~~~l~~~~p 135 (579)
|..-.+..|.+|||++ |-.-++|..... ......+...+...+.+.+|
T Consensus 143 L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~fa~~iA~~l~~~~P 191 (245)
T TIGR02778 143 LDELGLESFVKTSGGK-GLHVYVPLRPTLSWDEVKDFAKALAQALAQQMP 191 (245)
T ss_pred HHHcCCccceEccCCC-eEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 3334567899999999 999999999743 33333333344555667777
No 159
>CHL00123 rps6 ribosomal protein S6; Validated
Probab=22.95 E-value=3.8e+02 Score=22.91 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=31.0
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCCeeEeeEE-------eecCCCCCceEEEEEEec
Q 008068 436 IDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTS-------HVDLSTDPGHYVIFWEVS 485 (579)
Q Consensus 436 Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~-------~~~~~~~~~~y~~~vE~~ 485 (579)
--.++++++++++.+....+.+.|.++....- ++-.....+||+ ++.+.
T Consensus 15 ~p~l~e~~~~~~~~~~~~~i~~~gg~i~~~~~wG~r~LAY~I~k~~~G~Yv-~~~f~ 70 (97)
T CHL00123 15 KPDLNEEELLKWIENYKKLLRKRGAKNISVQNRGKRKLSYKINKYEDGIYI-QMNYS 70 (97)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCeeeeEEcCCCCEEEEE-EEEEE
Confidence 34568899999999987777677877665542 221223458886 33453
No 160
>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional
Probab=22.64 E-value=5.3e+02 Score=28.00 Aligned_cols=58 Identities=9% Similarity=0.136 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 008068 440 TEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (579)
Q Consensus 440 ~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 502 (579)
.+..+..++..+.. .|+.+.-....+ ....++.|.+|||+.+.......+...+.|.+
T Consensus 307 ~pGaL~~~L~~Fa~----~giNLtkIeSRP-~~~~~~~Y~Ffid~eg~~~d~~~~~aL~~l~~ 364 (386)
T PRK10622 307 QAGALVEALLVLRN----HNLIMTKLESRP-IHGNPWEEMFYLDVQANLRSAEMQKALKELGE 364 (386)
T ss_pred CCcHHHHHHHHHHH----cCCCeeEEEeee-cCCCCceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34566677766644 677776665554 34467899999999876443444444444543
No 161
>PRK13391 acyl-CoA synthetase; Provisional
Probab=20.51 E-value=84 Score=34.59 Aligned_cols=19 Identities=47% Similarity=0.529 Sum_probs=15.2
Q ss_pred ceeecccccCCCCcccccCC
Q 008068 93 TTISRSSGTTQGKPKFLPFN 112 (579)
Q Consensus 93 ~~f~~TSGTT~G~~K~iP~t 112 (579)
.+...||||| |.||-+-.+
T Consensus 157 a~il~TSGtT-G~PKgv~~~ 175 (511)
T PRK13391 157 TDMLYSSGTT-GRPKGIKRP 175 (511)
T ss_pred cEEEECCCCC-CCCCEEEEc
Confidence 4677899999 999987643
Done!