Your job contains 1 sequence.
>008069
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPR
IRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGC
GESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKG
ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIP
DPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKS
LEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQ
TPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAV
GVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKA
EVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWE
GLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008069
(579 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033055 - symbol:CRTISO "carotenoid isomerase"... 1891 3.0e-195 1
UNIPROTKB|Q0IS25 - symbol:Os11g0572700 "Os11g0572700 prot... 1026 3.1e-166 2
UNIPROTKB|A8J9E9 - symbol:CHLREDRAFT_196597 "Carotenoid i... 1248 4.2e-127 1
UNIPROTKB|Q10AT7 - symbol:Os03g0841900 "Os03g0841900 prot... 276 6.2e-33 2
UNIPROTKB|A8J3K3 - symbol:CHLREDRAFT_130438 "Predicted pr... 376 6.5e-33 1
TAIR|locus:2009395 - symbol:AT1G57770 species:3702 "Arabi... 355 3.5e-30 1
UNIPROTKB|A8J7T2 - symbol:CHLREDRAFT_176572 "Predicted pr... 251 1.8e-28 2
UNIPROTKB|P21685 - symbol:crtI "Phytoene desaturase (lyco... 239 4.0e-17 1
UNIPROTKB|P17054 - symbol:crtI "Phytoene desaturase (neur... 142 3.1e-14 2
UNIPROTKB|Q3Z8B0 - symbol:DET0811 "Phytoene dehydrogenase... 177 7.2e-14 2
TIGR_CMR|DET_0811 - symbol:DET_0811 "phytoene dehydrogena... 177 7.2e-14 2
RGD|628802 - symbol:Retsat "retinol saturase (all trans r... 209 1.4e-13 1
ZFIN|ZDB-GENE-050320-11 - symbol:retsat "retinol saturase... 202 8.1e-13 1
ZFIN|ZDB-GENE-061110-141 - symbol:zgc:154169 "zgc:154169"... 197 2.8e-12 1
UNIPROTKB|Q64FG0 - symbol:RETSAT "All-trans-retinol 13,14... 196 3.7e-12 1
MGI|MGI:1914692 - symbol:Retsat "retinol saturase (all tr... 195 4.8e-12 1
ZFIN|ZDB-GENE-050506-147 - symbol:pyroxd2 "pyridine nucle... 107 9.5e-12 3
UNIPROTKB|Q6NUM9 - symbol:RETSAT "All-trans-retinol 13,14... 191 1.3e-11 1
UNIPROTKB|P54979 - symbol:carA2 "zeta-carotene-forming ph... 126 1.9e-11 2
UNIPROTKB|E2R325 - symbol:RETSAT "Uncharacterized protein... 189 2.2e-11 1
UNIPROTKB|F1SVB2 - symbol:RETSAT "Uncharacterized protein... 186 4.6e-11 1
UNIPROTKB|Q8N2H3 - symbol:PYROXD2 "Pyridine nucleotide-di... 95 9.1e-11 4
WB|WBGene00018146 - symbol:F37C4.6 species:6239 "Caenorha... 138 1.2e-10 2
UNIPROTKB|Q3MHH6 - symbol:PYROXD2 "Pyridine nucleotide-di... 95 2.1e-10 3
MGI|MGI:1921830 - symbol:Pyroxd2 "pyridine nucleotide-dis... 95 5.2e-10 3
UNIPROTKB|Q8X0Z0 - symbol:carB "Phytoene dehydrogenase" s... 113 4.3e-09 2
TAIR|locus:505006683 - symbol:AT5G49555 species:3702 "Ara... 99 5.3e-09 3
RGD|1303232 - symbol:Pyroxd2 "pyridine nucleotide-disulph... 101 6.1e-09 3
UNIPROTKB|O07794 - symbol:Rv3829c "PROBABLE DEHYDROGENASE... 125 2.2e-08 3
UNIPROTKB|Q67GI0 - symbol:carB "Phytoene dehydrogenase" s... 116 1.2e-07 2
UNIPROTKB|Q02861 - symbol:carC "All-trans-zeta-carotene d... 104 5.1e-05 2
UNIPROTKB|E1BDK9 - symbol:RETSAT "Uncharacterized protein... 130 6.0e-05 1
>TAIR|locus:2033055 [details] [associations]
symbol:CRTISO "carotenoid isomerase" species:3702
"Arabidopsis thaliana" [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IBA;TAS]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IGI;TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0009662 "etioplast organization"
evidence=IMP] [GO:0046608 "carotenoid isomerase activity"
evidence=IGI;IMP] UniPathway:UPA00803 InterPro:IPR014101
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0031969
GO:GO:0016117 EMBL:AC011001 EMBL:BX813870 IPI:IPI00534972
PIR:A86203 RefSeq:NP_172167.2 UniGene:At.47600 UniGene:At.51507
UniGene:At.67219 ProteinModelPortal:Q9M9Y8 SMR:Q9M9Y8 STRING:Q9M9Y8
PaxDb:Q9M9Y8 PRIDE:Q9M9Y8 EnsemblPlants:AT1G06820.1 GeneID:837193
KEGG:ath:AT1G06820 TAIR:At1g06820 eggNOG:COG1233
HOGENOM:HOG000150223 InParanoid:Q9M9Y8 KO:K09835 OMA:AVGRKME
PhylomeDB:Q9M9Y8 ProtClustDB:CLSN2680687
BioCyc:ARA:AT1G06820-MONOMER BioCyc:MetaCyc:AT1G06820-MONOMER
Genevestigator:Q9M9Y8 GermOnline:AT1G06820 GO:GO:0046608
GO:GO:0009662 PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730
Uniprot:Q9M9Y8
Length = 595
Score = 1891 (670.7 bits), Expect = 3.0e-195, P = 3.0e-195
Identities = 365/447 (81%), Positives = 394/447 (88%)
Query: 135 TVMSVDNLVEIGGNEGMSR-GADD-YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192
TV SV + V +G R G + YDAIVIGSGIGGLVAATQLAVK ARVLVLEKY+IP
Sbjct: 53 TVKSVSSSVVASTVQGTKRDGGESLYDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIP 112
Query: 193 GGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPND 252
GGSSG+YERDGYTFDVGSSVMFGFSDKGNLNLITQAL AVG +MEVIPDPTTVHFHLPN+
Sbjct: 113 GGSSGFYERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNN 172
Query: 253 LSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312
LSVR+HREY DF+AELTSKFPHEKEG+L FYG+CWKIFN+LNSLELKSLEEPIYLFGQFF
Sbjct: 173 LSVRIHREYDDFIAELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFF 232
Query: 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCD 372
++PLECLTLAYYLPQNAG IARKYIKDPQLLSFIDAECFIVST+NALQTPMINASMVLCD
Sbjct: 233 QKPLECLTLAYYLPQNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCD 292
Query: 373 RHFXXXXXXXXXXXXXAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYA 432
RH+ AKSLA+GL D+GSEI YKANV +IL+ GKAVGVRL+DGREF+A
Sbjct: 293 RHYGGINYPVGGVGGIAKSLAEGLVDQGSEIQYKANVKSIILDHGKAVGVRLADGREFFA 352
Query: 433 KTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHF 492
KTIISNATRWDTFGKLLKGE+LPKEEENFQK+YVKAPSFLSIHMGVKAEVLPPDTDCHHF
Sbjct: 353 KTIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHF 412
Query: 493 VLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKE 552
VLEDDW LEEPYGSIFLSIPT+LDSSLAP+G HILHIFT SIEDWEGL K+Y+AKKE
Sbjct: 413 VLEDDWKNLEEPYGSIFLSIPTILDSSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKE 472
Query: 553 LVADEIINRLENKLFPGLKQSIAFREV 579
VA II RLE KLFPGL SI F+EV
Sbjct: 473 DVAARIIQRLEKKLFPGLSSSITFKEV 499
>UNIPROTKB|Q0IS25 [details] [associations]
symbol:Os11g0572700 "Os11g0572700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:AP008217
GO:GO:0016117 KO:K09835 ProtClustDB:CLSN2680687 GO:GO:0046608
PANTHER:PTHR10668:SF30 RefSeq:NP_001068127.1 UniGene:Os.69031
STRING:Q0IS25 PRIDE:Q0IS25 GeneID:4350758 KEGG:osa:4350758
Gramene:Q0IS25 Uniprot:Q0IS25
Length = 602
Score = 1026 (366.2 bits), Expect = 3.1e-166, Sum P(2) = 3.1e-166
Identities = 199/253 (78%), Positives = 216/253 (85%)
Query: 327 QNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFXXXXXXXXXXX 386
+NAG+IARK+IKD QLLSFIDAECFIVST+NALQTPMINASMVLCDRHF
Sbjct: 254 KNAGDIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVG 313
Query: 387 XXAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFG 446
A SLA GL DKGSEI YKANVT VILE GKAVGVRLS+G+EF+AKT+ISNATRWDTFG
Sbjct: 314 GIAMSLADGLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDTFG 373
Query: 447 KLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYG 506
KLLK E+LP+EE+NFQK YVKAPSFLSIHMGVKA VLP DTDCHHFVLEDDW LE+PYG
Sbjct: 374 KLLKVEELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPADTDCHHFVLEDDWANLEKPYG 433
Query: 507 SIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKL 566
SIFLSIPTVLD SLAPEGHHILHIFT IEDWEGL++KDY+ KKELVA EII RLE KL
Sbjct: 434 SIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKDYEKKKELVATEIIKRLEKKL 493
Query: 567 FPGLKQSIAFREV 579
FPGL+ SI +EV
Sbjct: 494 FPGLQDSIVLKEV 506
Score = 613 (220.8 bits), Expect = 3.1e-166, Sum P(2) = 3.1e-166
Identities = 121/168 (72%), Positives = 132/168 (78%)
Query: 121 GESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKG 180
G R A A V + +V+ E G +YDAIV+GSGIGG+VAATQLA KG
Sbjct: 90 GRGTRRGAGAAAAAAVAAEKTVVKAEEEE---EGGGEYDAIVVGSGIGGMVAATQLAAKG 146
Query: 181 ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIP 240
ARVLVLEKYVIPGGSSGYY RDG+TFDVGSSVMFGFSDKGNLNLITQAL AVG +MEVIP
Sbjct: 147 ARVLVLEKYVIPGGSSGYYRRDGFTFDVGSSVMFGFSDKGNLNLITQALEAVGHKMEVIP 206
Query: 241 DPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWK 288
DP+TVHFHLP DLSV VHREY DFV EL +KFPHEKEG+L FYG CWK
Sbjct: 207 DPSTVHFHLPGDLSVLVHREYDDFVTELVNKFPHEKEGILKFYGTCWK 254
Score = 45 (20.9 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 325 LPQNAGNIARKYIKDPQLLS 344
LP+ N + Y+K P LS
Sbjct: 381 LPEEEKNFQKNYVKAPSFLS 400
>UNIPROTKB|A8J9E9 [details] [associations]
symbol:CHLREDRAFT_196597 "Carotenoid isomerase"
species:3055 "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 ProtClustDB:CLSN2680687 GO:GO:0046608 GO:GO:0009662
PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730 EMBL:DS496146
RefSeq:XP_001698231.1 ProteinModelPortal:A8J9E9 STRING:A8J9E9
PRIDE:A8J9E9 EnsemblPlants:EDO99516 GeneID:5723787
KEGG:cre:CHLREDRAFT_196597 Uniprot:A8J9E9
Length = 568
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 238/434 (54%), Positives = 317/434 (73%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGF 216
+YDA+++G G+GGL A +L KGA+V+VLEKY++PGGS+ +++R+GYTFDVGSS+MFG
Sbjct: 64 EYDAVIVGGGMGGLATAARLVAKGAKVVVLEKYLLPGGSAAHFKREGYTFDVGSSMMFGM 123
Query: 217 SDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPND------LSVRVHREYSDFVAELTS 270
+G NLIT+ L +VG ++E +PDPT V +HLP L V V R+Y +F+ EL +
Sbjct: 124 GTEGTTNLITKCLESVGKKIETVPDPTQVVYHLPKSERFPKGLEVAVWRKYEEFIDELAA 183
Query: 271 KFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAG 330
KFPHE+EG+ FY ECW+IF++LN L+LKSLEEP YL G+F K+PL CLTLA +LP N G
Sbjct: 184 KFPHEREGIKKFYDECWRIFDSLNVLDLKSLEEPRYLLGEFAKQPLACLTLASFLPTNTG 243
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFXXXXXXXXXXXXXAK 390
++ARK+IKDP+LL FID ECFI ST+ A TPMINA MV CDRHF +
Sbjct: 244 DVARKHIKDPELLRFIDIECFIWSTVPADLTPMINAGMVFCDRHFGGINYPVGGVGRIGE 303
Query: 391 SLAKGLADKGSEILYKANVTKVILE---QG--KAVGVRLSDGREFYAKTIISNATRWDTF 445
LA G+ + G +I+YKANV +++L G +A GVRL+DGR F KT+ISNATRWDTF
Sbjct: 304 ELAAGIEEYGGKIVYKANVKEILLSPQPDGSQRATGVRLADGRVFKGKTVISNATRWDTF 363
Query: 446 GKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPY 505
L+ ++LP+ E+ F+K + K+PSF SIHMGVKA+VL + DCHH VLED W ++E+
Sbjct: 364 EGLIGKDKLPESEQLFRKRFKKSPSFFSIHMGVKAQVLEGEKDCHHIVLED-WAKMEKAR 422
Query: 506 GSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENK 565
G +F+S+PTVLD SLAP G+HI+H F IEDW+GL+ ++Y+AKKE VAD+I RL+
Sbjct: 423 GVLFVSLPTVLDPSLAPPGNHIVHAFVPDWIEDWQGLSVEEYEAKKEAVADDICRRLD-A 481
Query: 566 LFPGLKQSIAFREV 579
+ PGL +I FREV
Sbjct: 482 ILPGLSSNITFREV 495
>UNIPROTKB|Q10AT7 [details] [associations]
symbol:Os03g0841900 "Os03g0841900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:DP000009
EMBL:AP008209 GO:GO:0016117 EMBL:CM000140 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 RefSeq:NP_001051855.1
UniGene:Os.22483 STRING:Q10AT7 EnsemblPlants:LOC_Os03g62510.1
GeneID:4334739 KEGG:osa:4334739 OMA:PQCESFM ProtClustDB:CLSN2690470
Uniprot:Q10AT7
Length = 597
Score = 276 (102.2 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 70/242 (28%), Positives = 126/242 (52%)
Query: 337 IKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFX----XXXXXXXXXXXXAKSL 392
+K+P + ++ID CF+++ + + ++A MV + +L
Sbjct: 268 LKNPFVRNWIDLLCFLLAGVKS--DGALSAEMVYMFAEWYKPGCSLEYPLEGSGAIIDAL 325
Query: 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYA-KTIISNATRWDTFGKLLKG 451
+G+ G + +++V K+++E G+AVGV+L G+ A K ++SNA+ WDT LL
Sbjct: 326 VRGIKKFGGRLALRSHVEKILIENGRAVGVKLQSGQIVRARKAVVSNASMWDTLD-LLPP 384
Query: 452 EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNR-LEEPYGSIFL 510
+ +P+ ++ K + SF+ +H+G E D HH V+ +DWN+ ++ + +
Sbjct: 385 DAVPRSYQDKVKATPQCESFMHLHLGFDVENAREDLGIHHIVV-NDWNKGVDADQNVVLI 443
Query: 511 SIPTVLDSSLAPEGHHILHIFTICS--IEDWEGLAQK--DYDAKKELVADEIINRLENKL 566
S+PTVL + LAP G H+LH +T + WEGL +K +Y KE ++ + +E L
Sbjct: 444 SVPTVLGNGLAPPGKHVLHAYTPGTEPFSLWEGLDRKSAEYRRLKEERSEVMWKAVELAL 503
Query: 567 FP 568
P
Sbjct: 504 GP 505
Score = 157 (60.3 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 42/118 (35%), Positives = 60/118 (50%)
Query: 119 GCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGAD--DYDAIVIGSGIGGLVAATQL 176
GC + R +A D + G + +S A+ + D +VIGSGIGGL A L
Sbjct: 35 GCAAAARPARCRAVAADERPADPSIPEGEDGALSGEAERPEADVVVIGSGIGGLCCAGLL 94
Query: 177 AVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKG-NLNLITQALAAVG 233
A VLVLE + PGG++ ++ G+ FD G S+ GF +G N + Q L A+G
Sbjct: 95 ARYNQDVLVLESHDRPGGAAHSFDIKGFNFDSGPSLFSGFQSRGPQANPLAQVLDALG 152
>UNIPROTKB|A8J3K3 [details] [associations]
symbol:CHLREDRAFT_130438 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
[GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
[GO:0046608 "carotenoid isomerase activity" evidence=ISS]
InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496135
RefSeq:XP_001695939.1 UniGene:Cre.3256 ProteinModelPortal:A8J3K3
ProMEX:A8J3K3 EnsemblPlants:EDP01276 GeneID:5721453
KEGG:cre:CHLREDRAFT_130438 OMA:ANEPWER ProtClustDB:CLSN2922292
Uniprot:A8J3K3
Length = 558
Score = 376 (137.4 bits), Expect = 6.5e-33, P = 6.5e-33
Identities = 124/439 (28%), Positives = 214/439 (48%)
Query: 150 GMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVG 209
G +R + + D +VIGSGIGGL A LA G +V V E + I GG++ +ERDGY F+ G
Sbjct: 39 GEAR-SHETDVVVIGSGIGGLCCAGLLAKYGYKVTVCESHYIAGGAAHAWERDGYHFESG 97
Query: 210 SSVMFGFSDKGN-LNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSV-RVHREYSDFVAE 267
S+ G + +G N + L A+G E+++I T + +P + R+ + +FV
Sbjct: 98 PSLYSGMAGRGKEANPLGHVLQALGVELDLIRY-NTWNVVVPEGTFLTRIGND--NFVEV 154
Query: 268 LTSKFPHEKEGVLAFYGECWK-IFNALNSLELKSLE-EP---IYLFGQFFKRPLECLTLA 322
L E A E + + A + + +P + G++ LE A
Sbjct: 155 LKQIRGPEAMAEWARLQEVMRPLAKAATMIPPAAFRYDPGALVTAIGRYLPSLLESGPNA 214
Query: 323 YYLPQN-AGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCD--RHFXXXX 379
L AG + I+DP + +++D F++S + A T + + + R
Sbjct: 215 AKLSGPFAGVLDGANIRDPFIRNWLDLLSFLLSGLPANGTVAAEVAFMFNEWYRPDCFLE 274
Query: 380 XXXXXXXXXAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRLSDGREFYA-KTIIS 437
+ L G+ G ++ ++V K++L+ +GKA GV L G A K +IS
Sbjct: 275 FPVGGSQAMVQGLVGGMEKYGGRLMLSSHVDKILLDDKGKASGVALRGGGTIKARKAVIS 334
Query: 438 NATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD 497
NA+ WDT KL+ ++LP++ + PSF+ +H+G A+ L P + HH V+ +
Sbjct: 335 NASVWDTL-KLVPADRLPEQWRRERADTPACPSFMHLHVGFDAKGLDPGLELHHIVV-NR 392
Query: 498 WNR-LEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICS--IEDWEGLAQKDYD-AKKEL 553
W +++P + +SIP+V D S+AP G H LH + + E W+GL ++ + AK +
Sbjct: 393 WEGGVDQPQNVVLISIPSVKDPSMAPAGKHCLHAYLPATEPYEIWKGLDRRSLEYAKLKE 452
Query: 554 VADEIINRLENKLFPGLKQ 572
+++ K+ P +++
Sbjct: 453 ERSQVLWAGVEKVIPDIRK 471
>TAIR|locus:2009395 [details] [associations]
symbol:AT1G57770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016117 "carotenoid
biosynthetic process" evidence=IBA] [GO:0016491 "oxidoreductase
activity" evidence=IEA;ISS] [GO:0046608 "carotenoid isomerase
activity" evidence=IBA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR014101 EMBL:CP002684 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:AC079732
OMA:PQCESFM ProtClustDB:CLSN2690470 EMBL:AY065278 EMBL:AY133831
IPI:IPI00524521 PIR:A96612 RefSeq:NP_176088.2 UniGene:At.28533
ProteinModelPortal:Q9FVR9 SMR:Q9FVR9 STRING:Q9FVR9 PaxDb:Q9FVR9
PRIDE:Q9FVR9 EnsemblPlants:AT1G57770.1 GeneID:842152
KEGG:ath:AT1G57770 TAIR:At1g57770 InParanoid:Q9FVR9
PhylomeDB:Q9FVR9 ArrayExpress:Q9FVR9 Genevestigator:Q9FVR9
Uniprot:Q9FVR9
Length = 574
Score = 355 (130.0 bits), Expect = 3.5e-30, P = 3.5e-30
Identities = 127/450 (28%), Positives = 208/450 (46%)
Query: 107 NFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGN--EGMSRGADDYDAIVIG 164
NF G TL+S L R + + S + GN E S G + D +VIG
Sbjct: 4 NFCGLTLQSPFLYNFSRPTIRSSSFIRS---SSSSSASSNGNLKEPFS-GEPEADVVVIG 59
Query: 165 SGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKG-NLN 223
SGIGGL LA V+VLE + PGG++ +E GY FD G S+ G +G N
Sbjct: 60 SGIGGLCCGALLARYDQDVIVLESHDHPGGAAHSFEIKGYKFDSGPSLFSGLQSRGPQAN 119
Query: 224 LITQALAAVGCEMEVIPDPTTVHFHLPN-DLSVRVHREYSDFVAELTSKF--PHEKEGVL 280
+ Q L A+G E + +LP D R+ +DF +L K+ P +
Sbjct: 120 PLAQVLDALG-ESFPCKKYDSWMVYLPEGDFLSRIGP--TDFFKDL-EKYAGPSAVQEWE 175
Query: 281 AFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL--PQNA-G--NIARK 335
G + +A +L S+ + + R L ++ P+ A G + R
Sbjct: 176 KLLGAILPLSSAAMALPPLSIRGDLGVLSTAAARYAPSLLKSFIKMGPKGALGATKLLRP 235
Query: 336 Y--------IKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFX----XXXXXXX 383
+ +KDP + ++ID F+++ + + +++A M+ +
Sbjct: 236 FSEIVDSLELKDPFIRNWIDLLAFLLAGVKS--DGILSAEMIYMFAEWYKPGCTLEYPID 293
Query: 384 XXXXXAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYA-KTIISNATRW 442
++L +GL G + K++V +++E GKAVGV+L +G+ A K ++SNA+ W
Sbjct: 294 GTGAVVEALVRGLEKFGGRLSLKSHVENIVIENGKAVGVKLRNGQFVRARKAVVSNASMW 353
Query: 443 DTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNR-L 501
DT KLL LP+ + SF+ +H+G AE + D + HH V+ +DW+R +
Sbjct: 354 DTL-KLLPPGALPESYVKGVNTTPQCESFMHLHLGFDAEGIADDLEIHHIVV-NDWDRGV 411
Query: 502 EEPYGSIFLSIPTVLDSSLAPEGHHILHIF 531
+ + +S+P+VL +LAP G H+LH +
Sbjct: 412 DADQNVVLISVPSVLSPNLAPPGKHVLHAY 441
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 72/248 (29%), Positives = 129/248 (52%)
Query: 337 IKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFX----XXXXXXXXXXXXAKSL 392
+KDP + ++ID F+++ + + +++A M+ + ++L
Sbjct: 245 LKDPFIRNWIDLLAFLLAGVKS--DGILSAEMIYMFAEWYKPGCTLEYPIDGTGAVVEAL 302
Query: 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYA-KTIISNATRWDTFGKLLKG 451
+GL G + K++V +++E GKAVGV+L +G+ A K ++SNA+ WDT KLL
Sbjct: 303 VRGLEKFGGRLSLKSHVENIVIENGKAVGVKLRNGQFVRARKAVVSNASMWDTL-KLLPP 361
Query: 452 EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNR-LEEPYGSIFL 510
LP+ + SF+ +H+G AE + D + HH V+ +DW+R ++ + +
Sbjct: 362 GALPESYVKGVNTTPQCESFMHLHLGFDAEGIADDLEIHHIVV-NDWDRGVDADQNVVLI 420
Query: 511 SIPTVLDSSLAPEGHHILHIFTICSIED----WEGLAQKDYDAKK-ELVADEIINR-LEN 564
S+P+VL +LAP G H+LH + C + WEGL ++ + K + E++ R +E
Sbjct: 421 SVPSVLSPNLAPPGKHVLHAY--CPGTEPFGLWEGLDRRSAEYKNLKSQRSEVMWRAVER 478
Query: 565 KLFPGLKQ 572
L G K+
Sbjct: 479 ALGLGFKR 486
>UNIPROTKB|A8J7T2 [details] [associations]
symbol:CHLREDRAFT_176572 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
[GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
[GO:0046608 "carotenoid isomerase activity" evidence=ISS]
InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496142
RefSeq:XP_001697619.1 ProteinModelPortal:A8J7T2 GeneID:5723233
KEGG:cre:CHLREDRAFT_176572 ProtClustDB:CLSN2922724 Uniprot:A8J7T2
Length = 566
Score = 251 (93.4 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 84/278 (30%), Positives = 132/278 (47%)
Query: 305 IYLFGQFFKRPLECLTLAYYLPQNAGNIAR---KYIKDPQLLSFIDAECFIVSTINALQT 361
+ L G F P E L +A P G + K++ P L +F+D ECF++S + A T
Sbjct: 235 VALTGARFLGP-EMLGMAAIAPLLTGPFSALVDKHVTHPWLRAFLDLECFVLSGMTARDT 293
Query: 362 PMINASMVLCDRHFXXXXXXXXXXXXXAKSLAKGLADKGSEILYKANVTKVILEQGKAVG 421
+ + +R+ A G GSE + A V + I + G V
Sbjct: 294 LCAEMAFMFAERN----------AGRTAIDYPMG----GSEAIIDALV-RGITKNGGRVL 338
Query: 422 VRLSDGREFYAKT-IISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAP---SFLSIHMG 477
+R A+ ++SNA+ WDT +LL P E +++ +K P SF+ +H+G
Sbjct: 339 LRTHVPEFIRARCGVVSNASVWDT-QRLLPPGAAP---EQWRRTSLKTPALDSFVHLHLG 394
Query: 478 VKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICS-- 535
+ A LPPD +CHH V+ + W +L P I S+PTV D SLAP G +H + +
Sbjct: 395 IDATGLPPDLECHHLVV-NSWEQLTGPQNVIIASVPTVFDPSLAPPGKATVHCYCAANEP 453
Query: 536 IEDWEGLAQK--DYDAKKELVADEIINRLENKLFPGLK 571
+ W GL ++ +Y A KE A+ + LE + P ++
Sbjct: 454 YDLWAGLDRRSPEYKALKEERAEPLWEALE-RFIPDIR 490
Score = 141 (54.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 35/82 (42%), Positives = 44/82 (53%)
Query: 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSD 218
D +VIGSGIGGL A LA G RV V E + + GG++ + GY FD G S G
Sbjct: 84 DYVVIGSGIGGLCCAALLAKYGYRVTVCESHYLAGGAAHSFSVGGYRFDAGPSFFLGIGG 143
Query: 219 K---GNLNLITQALAAVGCEME 237
G+ N + Q L AVG +E
Sbjct: 144 PPGDGSPNPLKQVLDAVGESVE 165
>UNIPROTKB|P21685 [details] [associations]
symbol:crtI "Phytoene desaturase (lycopene-forming)"
species:553 "Pantoea ananatis" [GO:0016120 "carotene biosynthetic
process" evidence=IDA] [GO:0016627 "oxidoreductase activity, acting
on the CH-CH group of donors" evidence=IDA] [GO:0071949 "FAD
binding" evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
InterPro:IPR014105 Pfam:PF01593 InterPro:IPR008150 GO:GO:0005886
GO:GO:0071949 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
GO:GO:0016627 PANTHER:PTHR10668:SF3 TIGRFAMs:TIGR02734
PROSITE:PS00982 EMBL:D90087 PIR:D37802 PDB:4DGK PDBsum:4DGK
ProteinModelPortal:P21685 BioCyc:MetaCyc:MONOMER-15564
GO:GO:0016120 Uniprot:P21685
Length = 492
Score = 239 (89.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 109/428 (25%), Positives = 179/428 (41%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G GGL A +L G VL+LE+ PGG + YE G+TFD G +V+ +D
Sbjct: 6 VIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVI---TDP-- 60
Query: 222 LNLITQALAAVGCEMEVIPD--PTTVHFHLPNDLSVRVHREYSD---FVAELTSKFPHEK 276
+ I + A G +++ + P T + L + S +V +D A++ P +
Sbjct: 61 -SAIEELFALAGKQLKEYVELLPVTPFYRLCWE-SGKVFNYDNDQTRLEAQIQQFNPRDV 118
Query: 277 EGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKY 336
EG F +F L+L ++ P F + + L + ++ + Y
Sbjct: 119 EGYRQFLDYSRAVFKE-GYLKLGTV--PFLSFRDMLRAAPQLAKLQAW--RSVYSKVASY 173
Query: 337 IKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFXXXXXXXXXXXXXAKSLAKGL 396
I+D L +V N T I + +R + + + K
Sbjct: 174 IEDEHLRQAFSFHSLLVGG-NPFATSSIYTLIHALEREWGVWFPRGGTGAL-VQGMIKLF 231
Query: 397 ADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPK 456
D G E++ A V+ + K V L DGR F + + SNA T+ LL Q P
Sbjct: 232 QDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS--QHPA 289
Query: 457 EEENFQKLYVK--APSFLSIHMGVKA--EVLPPDTDC----HHFVLEDDWNR--LEEPYG 506
+ KL K + S ++ G+ + L T C + ++++ +N L E +
Sbjct: 290 AVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDF- 348
Query: 507 SIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKL 566
S++L P V DSSLAPEG ++ + + G A D+ + + D I LE
Sbjct: 349 SLYLHAPCVTDSSLAPEGCGSYYV--LAPVPHL-GTANLDWTVEGPKLRDRIFAYLEQHY 405
Query: 567 FPGLKQSI 574
PGL+ +
Sbjct: 406 MPGLRSQL 413
>UNIPROTKB|P17054 [details] [associations]
symbol:crtI "Phytoene desaturase (neurosporene-forming)"
species:272942 "Rhodobacter capsulatus SB 1003" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IDA] [GO:0071949 "FAD binding" evidence=IDA]
InterPro:IPR002937 InterPro:IPR014105 Pfam:PF01593
InterPro:IPR008150 GO:GO:0071949 GO:GO:0016117 GO:GO:0015979
EMBL:CP001312 GO:GO:0015995 GO:GO:0016627 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 GO:GO:0016120 EMBL:X52291
EMBL:Z11165 EMBL:J04969 PIR:A32617 RefSeq:YP_003576851.1
ProteinModelPortal:P17054 GeneID:9003508 KEGG:rcp:RCAP_rcc00679
PATRIC:35501426 HOGENOM:HOG000278176 KO:K10027 OMA:GPRYRES
ProtClustDB:CLSK940830 BioCyc:MetaCyc:MONOMER-14931
BioCyc:RCAP272942:GJIY-692-MONOMER Uniprot:P17054
Length = 524
Score = 142 (55.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 389 AKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREFYAKTIISNATRWDTFGK 447
A ++AK + D+G E+ V ++++ + GKA G+RL DG E A+ ++SNA T+ +
Sbjct: 231 ADAMAKVITDQGGEMRLNTEVDEILVSRDGKATGIRLMDGTELPAQVVVSNADAGHTYKR 290
Query: 448 LLKGEQLPK-EEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVL---------EDD 497
LL+ + +E K F+ + G K HH V+ +D
Sbjct: 291 LLRNRDRWRWTDEKLDKKRWSMGLFVW-YFGTKGTAKMWKDVGHHTVVVGPRYKEHVQDI 349
Query: 498 W--NRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELV 554
+ L E S+++ P+V D + AP+G ++ + + ++ G+ D+ + E
Sbjct: 350 FIKGELAEDM-SLYVHRPSVTDPTAAPKGDDTFYVLSPVPNLGFDNGV---DWSVEAEKY 405
Query: 555 ADEIINRLENKLFPGLKQSI 574
+++ +E +L PG+ + I
Sbjct: 406 KAKVLKVIEERLLPGVAEKI 425
Score = 121 (47.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 149 EGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDV 208
EGM R A+VIG+G+GGL AA +L KG +V V+++ PGG + G+ FD+
Sbjct: 6 EGMGR------AVVIGAGLGGLAAAMRLGAKGYKVTVVDRLDRPGGRGSSITKGGHRFDL 59
Query: 209 GSSVM 213
G +++
Sbjct: 60 GPTIV 64
>UNIPROTKB|Q3Z8B0 [details] [associations]
symbol:DET0811 "Phytoene dehydrogenase family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1233
RefSeq:YP_181539.1 ProteinModelPortal:Q3Z8B0 GeneID:3229931
KEGG:det:DET0811 PATRIC:21608681 HOGENOM:HOG000275358 OMA:LIWAADL
ProtClustDB:CLSK935611 BioCyc:DETH243164:GJNF-812-MONOMER
Uniprot:Q3Z8B0
Length = 523
Score = 177 (67.4 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 55/194 (28%), Positives = 92/194 (47%)
Query: 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
+ + K D E+ A V K++++ A+GVRL+DG E YA +IS ++T LL
Sbjct: 255 RRIEKRYKDLSGELTCSATVEKILVQNDCAIGVRLADGTEDYADYVISAGDIYNTVFHLL 314
Query: 450 KGEQLPKEEEN-FQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSI 508
G+ + K+ +N F + P F++ GVK + + L+ +
Sbjct: 315 DGKYIGKKLQNKFDTSELSLPYFVA-SFGVK-RTFENENVFNTIFLKKPLRVGNREVRQL 372
Query: 509 FLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKD---YDAKKELVADEIINRLENK 565
FL I S APEG ++ + W L Q D Y A+KE +A EI++ L+
Sbjct: 373 FLRIFNY-SSHFAPEGKSVIQVEFETEWVYWNNLKQTDLSKYTAEKERLAAEILDNLD-M 430
Query: 566 LFPGLKQSIAFREV 579
L+ G+ Q++ R++
Sbjct: 431 LYSGVSQAVEIRDI 444
Score = 80 (33.2 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 161 IVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKG 220
I+IG+G+ GL A + G + E + PGG + + R Y D G + G+ +
Sbjct: 30 IIIGAGLAGLSAGCYSRMNGYDTRIYEHHSKPGGVAASWRRGDYLVDGGIHFITGYKNGT 89
Query: 221 NL-NLITQ 227
+L N+ Q
Sbjct: 90 DLYNIYRQ 97
>TIGR_CMR|DET_0811 [details] [associations]
symbol:DET_0811 "phytoene dehydrogenase family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1233
RefSeq:YP_181539.1 ProteinModelPortal:Q3Z8B0 GeneID:3229931
KEGG:det:DET0811 PATRIC:21608681 HOGENOM:HOG000275358 OMA:LIWAADL
ProtClustDB:CLSK935611 BioCyc:DETH243164:GJNF-812-MONOMER
Uniprot:Q3Z8B0
Length = 523
Score = 177 (67.4 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 55/194 (28%), Positives = 92/194 (47%)
Query: 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
+ + K D E+ A V K++++ A+GVRL+DG E YA +IS ++T LL
Sbjct: 255 RRIEKRYKDLSGELTCSATVEKILVQNDCAIGVRLADGTEDYADYVISAGDIYNTVFHLL 314
Query: 450 KGEQLPKEEEN-FQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSI 508
G+ + K+ +N F + P F++ GVK + + L+ +
Sbjct: 315 DGKYIGKKLQNKFDTSELSLPYFVA-SFGVK-RTFENENVFNTIFLKKPLRVGNREVRQL 372
Query: 509 FLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKD---YDAKKELVADEIINRLENK 565
FL I S APEG ++ + W L Q D Y A+KE +A EI++ L+
Sbjct: 373 FLRIFNY-SSHFAPEGKSVIQVEFETEWVYWNNLKQTDLSKYTAEKERLAAEILDNLD-M 430
Query: 566 LFPGLKQSIAFREV 579
L+ G+ Q++ R++
Sbjct: 431 LYSGVSQAVEIRDI 444
Score = 80 (33.2 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 161 IVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKG 220
I+IG+G+ GL A + G + E + PGG + + R Y D G + G+ +
Sbjct: 30 IIIGAGLAGLSAGCYSRMNGYDTRIYEHHSKPGGVAASWRRGDYLVDGGIHFITGYKNGT 89
Query: 221 NL-NLITQ 227
+L N+ Q
Sbjct: 90 DLYNIYRQ 97
>RGD|628802 [details] [associations]
symbol:Retsat "retinol saturase (all trans retinol 13,14
reductase)" species:10116 "Rattus norvegicus" [GO:0005640 "nuclear
outer membrane" evidence=IEA;ISO;ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA;ISO;ISS;IBA] [GO:0016491
"oxidoreductase activity" evidence=ISO;ISS] [GO:0031965 "nuclear
membrane" evidence=ISO;ISS] [GO:0042572 "retinol metabolic process"
evidence=IEA;ISO;ISS;IBA] [GO:0051786 "all-trans-retinol
13,14-reductase activity" evidence=IEA;ISO;ISS;IBA] [GO:0055114
"oxidation-reduction process" evidence=ISO;ISS] RGD:628802
GO:GO:0005789 GO:GO:0042572 GO:GO:0005640 eggNOG:COG1233 CTD:54884
HOGENOM:HOG000233930 HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN
GO:GO:0051786 EMBL:AF465614 IPI:IPI00206948 RefSeq:NP_659552.1
UniGene:Rn.55275 ProteinModelPortal:Q8VHE9 STRING:Q8VHE9
PRIDE:Q8VHE9 GeneID:246298 KEGG:rno:246298 UCSC:RGD:628802
InParanoid:Q8VHE9 NextBio:623694 Genevestigator:Q8VHE9
GermOnline:ENSRNOG00000014090 Uniprot:Q8VHE9
Length = 609
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 103/405 (25%), Positives = 166/405 (40%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
+SR + DA+VIGSGIGGL +A LA G RVLVLE++ GG + +G FD G
Sbjct: 60 VSRVPEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGENGLEFDTGI 119
Query: 211 SVMFGFSDKGNLN-LITQALAAVGCEMEVIPDPTTVHF-HLPNDLS-VRVHREYSDFVAE 267
+ G +GN+ I + + + P + PN ++ +++
Sbjct: 120 HYI-GRMREGNIGRFILDQITEGQLDWAPMASPFDLMILEGPNGRKEFPMYSGRKEYIQG 178
Query: 268 LTSKFPHEKEGVLAFYGECWKIF--NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL 325
L KFP E E V+ Y E K+ +++ LK L P+ F
Sbjct: 179 LKEKFPKE-EAVIDKYMELVKVVAHGVSHAILLKFLPLPLTQLLNKFGLLTRFSPFCRAS 237
Query: 326 PQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQT-PMINASMVLCDRHFXXXXXXXXX 384
Q+ + ++ P+L + + +I+ T + + +L D +
Sbjct: 238 TQSLAEVLKQLGASPELQAVLS---YILPTYGVTPSHTTFSLHALLVDHYIQGAYYPRRG 294
Query: 385 XXXXAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YAKTIISNAT 440
A + G +L +A V V+L+ G+A GV + G+E Y +ISNA
Sbjct: 295 SSEIAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISNAG 354
Query: 441 RWDTFGKLLKGEQLPKEEENFQKLYVKAP-SFLSIHM---GVKAEVLPPDTDCHHFVLED 496
++T+ LL + Q VK S LSI + G K E+ T+ ++ +
Sbjct: 355 MFNTYQHLLPESVRYLPDVKKQLTMVKPGLSMLSIFICLKGTKEELKLQSTN-YYVYFDT 413
Query: 497 DWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHI-FTICSIEDWE 540
D ++ E Y +S+P APE +L I F WE
Sbjct: 414 DMDKAMECY----VSMP----KEKAPEHIPLLFIPFPSSKDPTWE 450
>ZFIN|ZDB-GENE-050320-11 [details] [associations]
symbol:retsat "retinol saturase (all-trans-retinol
13,14-reductase)" species:7955 "Danio rerio" [GO:0042572 "retinol
metabolic process" evidence=IBA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IBA] [GO:0051786 "all-trans-retinol
13,14-reductase activity" evidence=IEA;IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] ZFIN:ZDB-GENE-050320-11 GO:GO:0005789 GO:GO:0042572
eggNOG:COG1233 EMBL:BC078372 EMBL:BC090469 IPI:IPI00495382
RefSeq:NP_001015061.1 UniGene:Dr.80063 ProteinModelPortal:Q5BLE8
STRING:Q5BLE8 Ensembl:ENSDART00000013167 GeneID:325922
KEGG:dre:325922 CTD:54884 GeneTree:ENSGT00390000017613
HOGENOM:HOG000233930 HOVERGEN:HBG079484 InParanoid:Q5BLE8 KO:K09516
OMA:IHYIGEM OrthoDB:EOG4R23TN NextBio:20809552 Bgee:Q5BLE8
GO:GO:0051786 Uniprot:Q5BLE8
Length = 607
Score = 202 (76.2 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 90/370 (24%), Positives = 163/370 (44%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSS 211
SR +D DA+V+GSGIGGL A LA G +VLVLE++ GG ++ G+ FDVG
Sbjct: 57 SRVPEDLDAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGGCCHTFKEQGFEFDVGIH 116
Query: 212 VMFGFSDKGNLNLITQALAAVGCEMEVIPDP-TTVHFHLPNDLSVRVHREYSD---FVAE 267
+ S+ L I + + + + +P V P + R+++ YS ++ E
Sbjct: 117 YIGELSNHKPLRCIIDQMTNGQLQWDPLENPFDNVVIGPPENR--RIYQIYSGRKRYMDE 174
Query: 268 LTSKFPHEKEGVLAFYGECWKIFNALNSLEL-KSLEEPIYLFGQFFKRPLECLTLAYYLP 326
L FP E++ + + C ++ + + L K L PI F + + Y
Sbjct: 175 LKKCFPGEEKAIDEYVRLCKEVGQGVWVMVLLKFLPTPIANFLVRTGLANRLTSFSRYAS 234
Query: 327 QNAGNIARKYIKDPQLLSFIDAECFIVSTINAL-QTPMINASMVLCDRHFXXXXXXXXXX 385
++ ++ + ++ L + + +I T + + + ++ + +
Sbjct: 235 RSLTDVVNELTQNKDLRAVLS---YIFGTYGKIPKEASFSMHSLIVNHYMNGAWYPKGGA 291
Query: 386 XXXAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDGRE---FYAKTIISNATR 441
A + + G +L +A V +++L K A+GV + G+E A +IS+A
Sbjct: 292 TEIAYHMIPIIEKAGGAVLVRAPVNRILLNDAKEAIGVSVLKGQEEVHVRAPIVISDAGI 351
Query: 442 WDTFGKLL-KGEQ-LPKEEENFQKLYVKAPSFLSIHMGVKA--EVLPPDTDCHHFVLEDD 497
++T+ LL K Q +P ++ L S LSI +G+ E L D + E++
Sbjct: 352 FNTYEYLLPKDVQTMPAIQKQLSMLQ-HGDSGLSIFIGLDGTKEELGLKADNYFIYPENN 410
Query: 498 WNRLEEPYGS 507
+ L E Y S
Sbjct: 411 IDELLEDYRS 420
>ZFIN|ZDB-GENE-061110-141 [details] [associations]
symbol:zgc:154169 "zgc:154169" species:7955 "Danio
rerio" [GO:0055114 "oxidation-reduction process" evidence=IBA]
[GO:0051786 "all-trans-retinol 13,14-reductase activity"
evidence=IBA] [GO:0042572 "retinol metabolic process" evidence=IBA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IBA]
ZFIN:ZDB-GENE-061110-141 GO:GO:0005789 GO:GO:0042572 eggNOG:COG1233
GeneTree:ENSGT00390000017613 HOGENOM:HOG000233930
HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN GO:GO:0051786
EMBL:BX936386 EMBL:BC125971 IPI:IPI00817843 RefSeq:NP_001071261.1
UniGene:Dr.104319 Ensembl:ENSDART00000102690 GeneID:777751
KEGG:dre:777751 InParanoid:A0JMQ8 OMA:KDTREPL NextBio:20924309
Uniprot:A0JMQ8
Length = 607
Score = 197 (74.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 95/372 (25%), Positives = 163/372 (43%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSS 211
SR +D DA+V+GSGIGGL A LA G +VLVLE++ GG + G+ FDVG
Sbjct: 57 SRVPEDLDAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGGCCHTFTEQGFEFDVGIH 116
Query: 212 VMFGFSDKGNLNLITQALAAVGCEMEVIPDP-TTVHFHLPNDLSVRVHREYSD---FVAE 267
+ D + + + + + +P V P + R++ YS ++ E
Sbjct: 117 YIGELLDHTPFRCLIDQMTNGQLQWDPLENPFDKVVIGPPKNR--RIYPIYSGRKRYMDE 174
Query: 268 LTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRP--LECLTLAY-Y 324
L FP E++ + F C K+ + + L L P F +F R LT + Y
Sbjct: 175 LKKCFPGEEKAIDKFVRLCEKVAPGIWFMVLLKLA-PAP-FAKFLVRTGLASRLTSFFSY 232
Query: 325 LPQNAGNIARKYIKDPQLLSFIDAECFIVSTINAL--QTPMINASMVLCDRHFXXXXXX- 381
++ ++ + ++ L + + +I T + + S+++C HF
Sbjct: 233 ASRSLKDVVNELTQNKDLRAVLS---YIFLTYGNIPKEASFSMHSILVC--HFMNGAWYP 287
Query: 382 XXXXXXXAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDGRE---FYAKTIIS 437
A + + G +L +A V +++L K A+GV + G+E A +IS
Sbjct: 288 KGGASEIAYHMIPIIEKAGGAVLVRAPVNRILLNDAKEAIGVSVLKGQEEVHVRAPIVIS 347
Query: 438 NATRWDTFGKLL-KGEQ-LPKEEENFQKLYVKAPSFLSIHMGVKA--EVLPPDTDCHHFV 493
+A ++T+ LL K Q +P ++ L S LSI +G+ E L D +
Sbjct: 348 DAGIFNTYEHLLPKDVQTMPAIQKQLSMLK-HGESGLSIFIGLNGTKEELELKADNFYVF 406
Query: 494 LEDDWNRLEEPY 505
E++++ L E Y
Sbjct: 407 PENNFDELFEAY 418
>UNIPROTKB|Q64FG0 [details] [associations]
symbol:RETSAT "All-trans-retinol 13,14-reductase"
species:9541 "Macaca fascicularis" [GO:0005640 "nuclear outer
membrane" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0042572 "retinol metabolic process" evidence=ISS] [GO:0051786
"all-trans-retinol 13,14-reductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0005789 GO:GO:0042572 GO:GO:0005640 HOVERGEN:HBG079484
GO:GO:0051786 EMBL:AY707524 ProteinModelPortal:Q64FG0
Uniprot:Q64FG0
Length = 610
Score = 196 (74.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 99/382 (25%), Positives = 165/382 (43%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSS 211
SR + D +VIGSG GGL AA LA G RVLVLE++ GG+ + +G FD G
Sbjct: 62 SRVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGACHTFGENGLEFDTGIH 121
Query: 212 VMFGFSDKGNLNLITQALAAVGCEMEVIP--DPTTVHFHLPNDLSVRVHREYSD---FVA 266
+ G ++G++ G +++ +P P + L + + YS ++
Sbjct: 122 YI-GRMEEGSIGRFILDQITEG-QLDWVPMSSPFDIMV-LEGPNGRKEYPMYSGEKAYIQ 178
Query: 267 ELTSKFPHEKEGVLAFYGECWKIFN--ALNSLELKSLEEPIYLFGQFFKRPLECLTLAYY 324
L KFP E E ++ Y + K+ + +++ LK L P+ Q R C L +
Sbjct: 179 GLKEKFPQE-EAIIDKYIKLVKVVSNGVAHAILLKFLPLPVI---QLLDR---CGLLTRF 231
Query: 325 LP------QNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINA-SM--VLCDRHF 375
P Q+ + ++ +L + + +I T TP +A SM +L + +
Sbjct: 232 SPFLHASTQSLAEVLQQLGASSELQAVLS---YIFPTYGV--TPRHSAFSMHALLVNHYL 286
Query: 376 XXXXXXXXXXXXXAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---Y 431
A + G +L +A V V+L+ GKA GV + G E Y
Sbjct: 287 KGAFYPRGGSSEIAFHTIPVIQRAGGAVLTRATVQSVLLDSAGKACGVSVKKGHELVNIY 346
Query: 432 AKTIISNATRWDTFGKLLKGEQ--LP--KEEENFQKLYVKAPSFLSIHMGVKAEVLPPDT 487
++SNA ++T+ LL G LP K++ + + S G K ++ P T
Sbjct: 347 CPVVVSNAGLFNTYEHLLPGNARCLPGVKQQLGMVRPGLGMMSVFICLQGTKEDLHLPST 406
Query: 488 DCHHFVLED-DWNRLEEPYGSI 508
+ ++V D D ++ E Y S+
Sbjct: 407 N--YYVYHDTDMDQAMERYVSM 426
>MGI|MGI:1914692 [details] [associations]
symbol:Retsat "retinol saturase (all trans retinol 13,14
reductase)" species:10090 "Mus musculus" [GO:0005640 "nuclear outer
membrane" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] [GO:0042572 "retinol metabolic process"
evidence=IDA] [GO:0051786 "all-trans-retinol 13,14-reductase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] MGI:MGI:1914692 GO:GO:0005789 GO:GO:0042572
EMBL:CH466523 GO:GO:0005640 eggNOG:COG1233 CTD:54884
GeneTree:ENSGT00390000017613 HOGENOM:HOG000233930
HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN GO:GO:0051786
EMBL:AF466400 EMBL:AY704159 EMBL:EF620363 EMBL:EF620364
EMBL:EF620365 EMBL:EF620366 EMBL:AK002851 EMBL:AK144115
EMBL:AC125039 EMBL:BC011203 EMBL:BC117751 IPI:IPI00471380
RefSeq:NP_080435.3 UniGene:Mm.305108 ProteinModelPortal:Q64FW2
SMR:Q64FW2 STRING:Q64FW2 PhosphoSite:Q64FW2 PaxDb:Q64FW2
PRIDE:Q64FW2 Ensembl:ENSMUST00000070597 GeneID:67442 KEGG:mmu:67442
InParanoid:Q149J8 OMA:PSHTTFS BioCyc:MetaCyc:MONOMER-16797
BRENDA:1.3.99.23 NextBio:324578 Bgee:Q64FW2 Genevestigator:Q64FW2
GermOnline:ENSMUSG00000056666 Uniprot:Q64FW2
Length = 609
Score = 195 (73.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 105/407 (25%), Positives = 170/407 (41%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
+SR + DA+VIGSGIGGL +A LA G RVLVLE++ GG + +G FD G
Sbjct: 60 VSRVPEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGENGLEFDTGI 119
Query: 211 SVMFGFSDKGNLN-LITQALAAVGCEMEVIPDPTTVHF-HLPNDLS-VRVHREYSDFVAE 267
+ G +GN+ I + + + P + PN ++ +++
Sbjct: 120 HYI-GRMREGNIGRFILDQITEGQLDWAPMASPFDLMILEGPNGRKEFPMYSGRKEYIQG 178
Query: 268 LTSKFPHEKEGVLAFYGECWKIF--NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL 325
L KFP E E V+ Y E K+ +++ LK L P+ F
Sbjct: 179 LKKKFPKE-EAVIDKYMELVKVVARGVSHAVLLKFLPLPLTQLLSKFGLLTRFSPFCRAS 237
Query: 326 PQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINA-SM--VLCDRHFXXXXXXX 382
Q+ + ++ +L + + +I T TP A S+ +L D +
Sbjct: 238 TQSLAEVLQQLGASRELQAVLS---YIFPTYGV--TPSHTAFSLHALLVDHYIQGAYYPR 292
Query: 383 XXXXXXAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YAKTIISN 438
A + G +L +A V V+L+ G+A GV + G+E Y +ISN
Sbjct: 293 GGSSEIAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISN 352
Query: 439 ATRWDTFGKLLKGEQLPKEEENFQKLYVKAP--SFLSIHMGVKA--EVLPPDTDCHHFVL 494
A ++T+ LL E + + ++L + P S LSI + +K E L + ++
Sbjct: 353 AGMFNTYQHLLP-ETVRHLPDVKKQLAMVRPGLSMLSIFICLKGTKEDLKLQSTNYYVYF 411
Query: 495 EDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHI-FTICSIEDWE 540
+ D ++ E Y +S+P APE +L I F WE
Sbjct: 412 DTDMDKAMERY----VSMP----KEKAPEHIPLLFIAFPSSKDPTWE 450
>ZFIN|ZDB-GENE-050506-147 [details] [associations]
symbol:pyroxd2 "pyridine nucleotide-disulphide
oxidoreductase domain 2" species:7955 "Danio rerio" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] ZFIN:ZDB-GENE-050506-147
CTD:84795 HOGENOM:HOG000238954 EMBL:BC091832 IPI:IPI00497804
RefSeq:NP_001243145.1 UniGene:Dr.41107 ProteinModelPortal:Q58EN1
GeneID:553066 KEGG:dre:553066 HOVERGEN:HBG057345 InParanoid:Q58EN1
ArrayExpress:Q58EN1 Uniprot:Q58EN1
Length = 571
Score = 107 (42.7 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 390 KSLAKGLADKGSEILYKANVTKVIL-EQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL 448
+S+A+ G++I +V +V++ G A GV L+DG E ++K ++SNAT TF +L
Sbjct: 282 QSIARSARSLGADIFTNTDVEQVLIGPDGSAKGVVLTDGTEVHSKVVLSNATPHVTFKRL 341
Query: 449 LKGEQLPK 456
+ LP+
Sbjct: 342 TPQDALPE 349
Score = 91 (37.1 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
Identities = 39/124 (31%), Positives = 56/124 (45%)
Query: 467 KAPSFLSIHMGVKAEVLPPDTDCHHF------VLEDD-WNRLEEPYGS---IFLSIPTVL 516
K P FL+ G + P H VLED W S I ++IP+VL
Sbjct: 373 KLPDFLAAPNGADGKAGPHHQCSIHLNCESVEVLEDAYWEGQHGRPSSRPMIEMTIPSVL 432
Query: 517 DSSLAPEGHHILHIFTICSIEDWEGL-AQKDYDAKKELVADEIINRLENKLFPGLKQSIA 575
D +LAP G H++ +F + EG A D D KE D + + +E + PG K SI
Sbjct: 433 DPTLAPPGCHVVSLFIQFTPYLLEGRRAWTDED--KERFGDTVFDWVE-RYAPGFKASIV 489
Query: 576 FREV 579
+++
Sbjct: 490 GKDI 493
Score = 86 (35.3 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196
YDA++IG+G GL+A+ L G R VLE+ + GG++
Sbjct: 25 YDAVIIGAGHNGLIASAYLQKGGLRTAVLERRHVLGGAA 63
>UNIPROTKB|Q6NUM9 [details] [associations]
symbol:RETSAT "All-trans-retinol 13,14-reductase"
species:9606 "Homo sapiens" [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS;IBA] [GO:0042572 "retinol metabolic process"
evidence=ISS;IBA] [GO:0051786 "all-trans-retinol 13,14-reductase
activity" evidence=ISS;IBA] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0005640 "nuclear outer membrane" evidence=ISS] GO:GO:0005789
GO:GO:0042572 GO:GO:0005640 DrugBank:DB00162 EMBL:AC062037
eggNOG:COG1233 CTD:54884 HOVERGEN:HBG079484 KO:K09516
OrthoDB:EOG4R23TN GO:GO:0051786 EMBL:AY358568 EMBL:AK075261
EMBL:AC093162 EMBL:BC068517 EMBL:BC011418 EMBL:AK000303
IPI:IPI00296157 IPI:IPI00335161 RefSeq:NP_060220.3
UniGene:Hs.440401 ProteinModelPortal:Q6NUM9 SMR:Q6NUM9
STRING:Q6NUM9 PhosphoSite:Q6NUM9 DMDM:90108452 PaxDb:Q6NUM9
PRIDE:Q6NUM9 DNASU:54884 Ensembl:ENST00000263854
Ensembl:ENST00000295802 GeneID:54884 KEGG:hsa:54884 UCSC:uc002spd.3
GeneCards:GC02M085569 HGNC:HGNC:25991 HPA:HPA007961
neXtProt:NX_Q6NUM9 PharmGKB:PA145007867 InParanoid:Q6NUM9
OMA:VQLLDRC PhylomeDB:Q6NUM9 GenomeRNAi:54884 NextBio:57859
ArrayExpress:Q6NUM9 Bgee:Q6NUM9 CleanEx:HS_RETSAT
Genevestigator:Q6NUM9 GermOnline:ENSG00000042445 Uniprot:Q6NUM9
Length = 610
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 97/370 (26%), Positives = 159/370 (42%)
Query: 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSD 218
D +VIGSG GGL AA LA G RVLVLE++ GG + ++G FD G + G +
Sbjct: 69 DVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGIHYI-GRME 127
Query: 219 KGNLN-LITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSD---FVAELTSKFPH 274
+G++ I + + + P + L + + YS ++ L KFP
Sbjct: 128 EGSIGRFILDQITEGQLDWAPLSSPFDIMV-LEGPNGRKEYPMYSGEKAYIQGLKEKFPQ 186
Query: 275 EKEGVLAFYGECWKIFN--ALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP--QNAG 330
E E ++ Y + K+ + A +++ LK L P+ Q R C L + P Q +
Sbjct: 187 E-EAIIDKYIKLVKVVSSGAPHAILLKFLPLPVV---QLLDR---CGLLTRFSPFLQAST 239
Query: 331 NIARKYIKDPQLLSFIDAEC-FIVSTINALQTPMINA-SM--VLCDRHFXXXXXXXXXXX 386
+ ++ S + A +I T TP +A SM +L + +
Sbjct: 240 QSLAEVLQQLGASSELQAVLSYIFPTYGV--TPNHSAFSMHALLVNHYMKGGFYPRGGSS 297
Query: 387 XXAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YAKTIISNATRW 442
A + G +L KA V V+L+ GKA GV + G E Y ++SNA +
Sbjct: 298 EIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHELVNIYCPIVVSNAGLF 357
Query: 443 DTFGKLLKGEQ--LP--KEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDW 498
+T+ LL G LP K++ + + S G K ++ P T+ ++ + D
Sbjct: 358 NTYEHLLPGNARCLPGVKQQLGTVRPGLGMTSVFICLRGTKEDLHLPSTN-YYVYYDTDM 416
Query: 499 NRLEEPYGSI 508
++ E Y S+
Sbjct: 417 DQAMERYVSM 426
>UNIPROTKB|P54979 [details] [associations]
symbol:carA2 "zeta-carotene-forming phytoene desaturase"
species:34 "Myxococcus xanthus" [GO:0016117 "carotenoid
biosynthetic process" evidence=IDA] [GO:0016627 "oxidoreductase
activity, acting on the CH-CH group of donors" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
UniPathway:UPA00803 InterPro:IPR002937 InterPro:IPR014105
Pfam:PF01593 InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979
GO:GO:0015995 GO:GO:0016627 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 EMBL:Z21955 PIR:S32169
ProteinModelPortal:P54979 BioCyc:MetaCyc:MONOMER-16379
Uniprot:P54979
Length = 517
Score = 126 (49.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 42/121 (34%), Positives = 62/121 (51%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
MS +V+G+G+GGL AA +LA +G V V EK PGG + DG+T+D+G
Sbjct: 1 MSASTQGRRIVVVGAGVGGLAAAARLAHQGFDVQVFEKTQGPGGRCNRLQVDGFTWDLGP 60
Query: 211 SVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVH-REYSD--FVAE 267
+++ + + AVG +E D T+ L D + RVH R+ SD F +E
Sbjct: 61 TIVL------MPEVFEETFRAVGRRIE---DYLTL---LRCDPNYRVHFRDRSDVTFTSE 108
Query: 268 L 268
L
Sbjct: 109 L 109
Score = 111 (44.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
++L + ++G Y A V +++ + G+ GVRL G A ++ NA + KLL
Sbjct: 233 QALERLAREEGVRFHYGAPVERILTDGGRTRGVRLEGGEVVEADAVLCNADLPYAYEKLL 292
Query: 450 --KGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-------- 499
K L ++E KL + ++ +++G+K P+ H+ V D+
Sbjct: 293 DPKATTLKRKE----KLRYTSSGYM-LYLGMKRRY--PELLHHNVVFGRDYKGSFDDIFE 345
Query: 500 -RL-EEPYGSIFLSIPTVLDSSLAPEGHHILHI 530
R+ E+P S +++ PT D+SLAPEG L++
Sbjct: 346 FRVPEDP--SFYVNAPTRTDASLAPEGKDALYV 376
>UNIPROTKB|E2R325 [details] [associations]
symbol:RETSAT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051786 "all-trans-retinol 13,14-reductase
activity" evidence=IEA] [GO:0042572 "retinol metabolic process"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005640 "nuclear outer membrane" evidence=IEA]
GO:GO:0005789 GO:GO:0042572 GO:GO:0005640 CTD:54884
GeneTree:ENSGT00390000017613 KO:K09516 GO:GO:0051786 OMA:PSHTTFS
EMBL:AAEX03010938 RefSeq:XP_540198.1 Ensembl:ENSCAFT00000012478
GeneID:483083 KEGG:cfa:483083 NextBio:20857540 Uniprot:E2R325
Length = 608
Score = 189 (71.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 95/374 (25%), Positives = 159/374 (42%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSS 211
SR + DA+VIGSG GGL AA LA G RVLVLE++ GG + +G FD G
Sbjct: 60 SRVPEKLDAVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFRHNGLEFDTGIH 119
Query: 212 VMFGFSDKGNLNLITQALAAVG-CEMEVIPDPTTVH-FHLPNDLS-VRVHREYSDFVAEL 268
+ G +G++ G + + P + PN ++ ++ L
Sbjct: 120 YV-GSMQEGSIGRFALDQITEGQLDWAALSSPFDIMVLERPNGRKEFPMYSGKKAYIQGL 178
Query: 269 TSKFPHEKEGVLAFYGECWKIFNA--LNSLELKSLEEPIYLFGQFFKRPLECLT-LAYYL 325
KFP E E + Y + K+ + ++++ LK L P+ + K L LT + +L
Sbjct: 179 KEKFPQE-EAAIDKYVKLVKVVSCGVIHAILLKML--PLRIAQLLGKCGL--LTRFSPFL 233
Query: 326 PQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINA-SM--VLCDRHFXXXXXXX 382
+ ++A + P L +I T TP +A SM ++ D +
Sbjct: 234 RASTQSLAEVLQQLPASLELQAVLSYIFPTYGV--TPSHSAFSMHALVVDHYIEGAFYPR 291
Query: 383 XXXXXXAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YAKTIISN 438
A + G E+L A V ++L+ GKA GV + +E Y +IS+
Sbjct: 292 GGASEIAFHTIPVIQRAGGEVLTGATVRSILLDSAGKACGVTVKKNQELVNIYCPIVISS 351
Query: 439 ATRWDTFGKLL--KGEQLPKEEENFQKLYVKAPSFLSIHMGVKA--EVLPPDTDCHHFVL 494
A ++T+ LL LP ++ + + +F SI +G++ E L + +
Sbjct: 352 AGLFNTYNYLLPENARCLPGVKQQLEMVRPGVGAF-SIFIGLRGTKEDLGLQSTNYFVCF 410
Query: 495 EDDWNRLEEPYGSI 508
+ D ++ E Y S+
Sbjct: 411 DTDLDKAMEHYLSM 424
>UNIPROTKB|F1SVB2 [details] [associations]
symbol:RETSAT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051786 "all-trans-retinol 13,14-reductase activity"
evidence=IEA] [GO:0042572 "retinol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005640 "nuclear outer membrane" evidence=IEA] GO:GO:0005789
GO:GO:0042572 GO:GO:0005640 CTD:54884 GeneTree:ENSGT00390000017613
KO:K09516 GO:GO:0051786 OMA:PSHTTFS EMBL:CU951451 EMBL:GACC01000106
RefSeq:XP_003124992.1 UniGene:Ssc.1051 Ensembl:ENSSSCT00000009020
GeneID:100519138 KEGG:ssc:100519138 Uniprot:F1SVB2
Length = 611
Score = 186 (70.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 81/320 (25%), Positives = 137/320 (42%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
++R + D +VIGSG GGL AA LA G RVLVLE++ GG + +DG FD G
Sbjct: 60 VNRVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKDGLEFDTGI 119
Query: 211 SVMFGFSDKGNLN-LITQALAAVGCEMEVIPDPTTVH-FHLPNDLS-VRVHREYSDFVAE 267
+ G ++G+ I + + + P + PN ++ +V
Sbjct: 120 HYI-GRMEEGSFGRFILDQITEGQLDWATLSSPFDIMVLDGPNGRKEFPMYTGKKAYVQG 178
Query: 268 LTSKFPHEKEGVLAFYGECWKIFN--ALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL 325
L KFP E E + Y + K+ + A +++ LK L P+ QF + + +L
Sbjct: 179 LKEKFPQE-EAAIDKYIKLVKMVSSRASHAILLKILPLPL---AQFLSKYGLLTRFSPFL 234
Query: 326 ---PQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS-MVLCDRHFXXXXXX 381
Q+ + ++ P+L + + +I T + A +L D +
Sbjct: 235 RASTQSLAKVLQQLPASPELRAVLS---YIFPTYGVTPSHSTFAMHALLVDHYLKGAFYP 291
Query: 382 XXXXXXXAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YAKTIIS 437
A + G +L +A V ++L+ GKA GV + +G+E + +IS
Sbjct: 292 KGGTSEIAFHTIPVIQRAGGAVLTRAPVQSILLDSAGKACGVAVKNGQELVNIFCPVVIS 351
Query: 438 NATRWDTFGKLL--KGEQLP 455
+A ++T+ LL K LP
Sbjct: 352 DAGLFNTYEHLLPEKARSLP 371
>UNIPROTKB|Q8N2H3 [details] [associations]
symbol:PYROXD2 "Pyridine nucleotide-disulfide
oxidoreductase domain-containing protein 2" species:9606 "Homo
sapiens" [GO:0016491 "oxidoreductase activity" evidence=IEA]
EMBL:CH471066 GO:GO:0016491 eggNOG:COG1233 EMBL:AL139243 CTD:84795
HOGENOM:HOG000238954 OrthoDB:EOG4WM4TG EMBL:AK075265 EMBL:BC006131
IPI:IPI00296156 RefSeq:NP_116098.2 UniGene:Hs.238303
ProteinModelPortal:Q8N2H3 SMR:Q8N2H3 IntAct:Q8N2H3 STRING:Q8N2H3
PhosphoSite:Q8N2H3 DMDM:109820933 PRIDE:Q8N2H3 DNASU:84795
Ensembl:ENST00000370575 GeneID:84795 KEGG:hsa:84795 UCSC:uc001kpc.3
GeneCards:GC10M100134 HGNC:HGNC:23517 HPA:HPA037566
neXtProt:NX_Q8N2H3 PharmGKB:PA165549043 InParanoid:Q8N2H3
OMA:HRPMIEL PhylomeDB:Q8N2H3 GenomeRNAi:84795 NextBio:74960
ArrayExpress:Q8N2H3 Bgee:Q8N2H3 CleanEx:HS_C10orf33
Genevestigator:Q8N2H3 GermOnline:ENSG00000119943 Uniprot:Q8N2H3
Length = 581
Score = 95 (38.5 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 391 SLAKGLADKGSEILYKANVTKV-ILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
++A G+ I + V KV + +G GV L DG E +K ++SN + TF KL
Sbjct: 293 AIASSATTHGASIFTEKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLT 352
Query: 450 KGEQLPKEE-ENFQKLYVKAP 469
E LP+E E +L ++P
Sbjct: 353 PQEWLPEEFLERISQLDTRSP 373
Score = 95 (38.5 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 467 KAPSFLSIHMGVKAEVLP----------PDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVL 516
+ PSFL+ + + LP DT H ED + L I L IP+ L
Sbjct: 383 RLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGLPSHRPVIELCIPSSL 442
Query: 517 DSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAF 576
D +LAP G H++ +FT G D + +++ AD + + +E PG K S+
Sbjct: 443 DPTLAPPGCHVVSLFTQYMPYTLAGGKAWD-EQERDAYADRVFDCIE-VYAPGFKDSVVG 500
Query: 577 REV 579
R++
Sbjct: 501 RDI 503
Score = 85 (35.0 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVM 213
+YDA+VIG+G GLVAA L G V E+ + GG++ E G+ F S ++
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLL 91
Score = 39 (18.8 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 304 PIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPM 363
P+ G K P CL L + +N IA+ KD Q+ F E F+ A+ P+
Sbjct: 121 PMLEEGAGSKVP-RCLLLGTDMAENQKQIAQFSQKDAQV--FPKYEEFMHRLALAID-PL 176
Query: 364 INASMV 369
++A+ V
Sbjct: 177 LDAAPV 182
>WB|WBGene00018146 [details] [associations]
symbol:F37C4.6 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] eggNOG:COG1233
EMBL:FO081250 HOGENOM:HOG000238954 OMA:HRPMIEL
GeneTree:ENSGT00390000011684 PIR:T32568 RefSeq:NP_500428.1
ProteinModelPortal:O61196 SMR:O61196 STRING:O61196 PaxDb:O61196
EnsemblMetazoa:F37C4.6.1 EnsemblMetazoa:F37C4.6.2 GeneID:177147
KEGG:cel:CELE_F37C4.6 UCSC:F37C4.6.1 CTD:177147 WormBase:F37C4.6
InParanoid:O61196 NextBio:895552 Uniprot:O61196
Length = 544
Score = 138 (53.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 33/92 (35%), Positives = 56/92 (60%)
Query: 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL 448
+ ++A+ G+EI + +V +V+L+ A GVRLS+G+E ++K ++SNAT TF L
Sbjct: 259 SNAIAECAKSHGAEIYTEQDVQEVLLDGNVAKGVRLSNGKELHSKIVMSNATPHVTFNHL 318
Query: 449 LKGEQLPKE-EENFQKLYVKAPSFLSIHMGVK 479
+K E LP+E N ++ +P I++ VK
Sbjct: 319 VKKESLPEEFHRNINQIDYTSP-VTKINVAVK 349
Score = 91 (37.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVM 213
YDAI+IG G GL AA L G +V VLE+ + GG++ E G+ F S ++
Sbjct: 15 YDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVTEEIVPGFRFSRASYLL 71
>UNIPROTKB|Q3MHH6 [details] [associations]
symbol:PYROXD2 "Pyridine nucleotide-disulfide
oxidoreductase domain-containing protein 2" species:9913 "Bos
taurus" [GO:0016491 "oxidoreductase activity" evidence=IEA]
GO:GO:0016491 eggNOG:COG1233 EMBL:BC105235 IPI:IPI00716581
RefSeq:NP_001029704.1 UniGene:Bt.53596 ProteinModelPortal:Q3MHH6
STRING:Q3MHH6 PRIDE:Q3MHH6 GeneID:519120 KEGG:bta:519120 CTD:84795
HOGENOM:HOG000238954 InParanoid:Q3MHH6 OrthoDB:EOG4WM4TG
NextBio:20872812 Uniprot:Q3MHH6
Length = 581
Score = 95 (38.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 29/81 (35%), Positives = 40/81 (49%)
Query: 391 SLAKGLADKGSEILYKANVTKVILEQGKAV-GVRLSDGREFYAKTIISNATRWDTFGKLL 449
++A G I + V KV + G V GV L DG E +K ++SNA+ TF KL
Sbjct: 293 AIASSATAHGVSIFTEKTVAKVQVSSGGRVQGVVLQDGSEVRSKVVLSNASPQITFLKLT 352
Query: 450 KGEQLPKE-EENFQKLYVKAP 469
E LP+E +L K+P
Sbjct: 353 PQEWLPEEFVARIAQLDTKSP 373
Score = 94 (38.1 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 486 DTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQK 545
DT H ED + L I L IP+ LD +LAP G H++ +FT + G
Sbjct: 412 DTLLVHQAFEDTLDGLPSKRPLIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAGGKAW 471
Query: 546 DYDAKKELVADEIINRLENKLFPGLKQSIAFREV 579
D + ++ AD + + +E PG K S+ R++
Sbjct: 472 D-EQQRNTYADRVFDCIE-AYAPGFKGSVVGRDI 503
Score = 83 (34.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVM 213
+YDA+V+G+G GLVAA L G V E+ + GG++ E G+ F S ++
Sbjct: 34 EYDAVVVGAGHNGLVAAAYLQRFGVNTAVFERRHVIGGAAVTEEIVPGFKFSRASYLL 91
>MGI|MGI:1921830 [details] [associations]
symbol:Pyroxd2 "pyridine nucleotide-disulphide
oxidoreductase domain 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] MGI:MGI:1921830
GO:GO:0016491 eggNOG:COG1233 CTD:84795 OrthoDB:EOG4WM4TG
EMBL:AK014668 EMBL:AK038414 EMBL:AK154222 IPI:IPI00345682
RefSeq:NP_083287.2 UniGene:Mm.329858 ProteinModelPortal:Q3U4I7
SMR:Q3U4I7 STRING:Q3U4I7 PhosphoSite:Q3U4I7 PaxDb:Q3U4I7
PRIDE:Q3U4I7 GeneID:74580 KEGG:mmu:74580 InParanoid:Q3U4I7
ChiTaRS:PYROXD2 NextBio:341153 CleanEx:MM_4833409A17RIK
Genevestigator:Q3U4I7 GermOnline:ENSMUSG00000060224 Uniprot:Q3U4I7
Length = 580
Score = 95 (38.5 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 486 DTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQK 545
DT H ED L I L IP+ LD +LAP G H++ +FT + G +
Sbjct: 411 DTLLLHQAFEDAKGGLPSQKPMIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAG-GKV 469
Query: 546 DYDAKKELVADEIINRLENKLFPGLKQSIAFREV 579
+ +K AD++ + +E PG K+S+ R++
Sbjct: 470 WNEQEKNTYADKVFDCIE-AYAPGFKRSVLARDI 502
Score = 88 (36.0 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 391 SLAKGLADKGSEILYKANVTKV-ILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
++A A +G+ I + V KV + +G+ GV L DG E ++ ++S A+ TF +L
Sbjct: 292 AIASSAATRGASIFTEKTVAKVQVNSEGRVQGVTLQDGEEVRSRVVLSCASPQVTFLELT 351
Query: 450 KGEQLP 455
E LP
Sbjct: 352 PQEWLP 357
Score = 85 (35.0 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVM 213
+YDA+VIG+G GLVAA L G V E+ + GG++ E G+ F S ++
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLL 91
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 522 PEGHHILHIFTICSIEDWEGLAQKDYDAK 550
P+GHH I C ED L Q DAK
Sbjct: 397 PQGHHQCSIHLNC--EDTLLLHQAFEDAK 423
>UNIPROTKB|Q8X0Z0 [details] [associations]
symbol:carB "Phytoene dehydrogenase" species:5127 "Fusarium
fujikuroi" [GO:0016120 "carotene biosynthetic process"
evidence=IMP] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IMP] InterPro:IPR014105 InterPro:IPR008150 GO:GO:0016117
GO:GO:0015979 GO:GO:0015995 TIGRFAMs:TIGR02734 PROSITE:PS00982
GO:GO:0016120 GO:GO:0016166 EMBL:AJ426418 ProteinModelPortal:Q8X0Z0
Uniprot:Q8X0Z0
Length = 570
Score = 113 (44.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 161 IVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM-----FG 215
IVIG+G+GG+ A +LA G +V +LEK GG DG+ FD G S++ F
Sbjct: 9 IVIGAGVGGVSTAARLAKAGFKVTILEKNDFTGGRCSLIHNDGHRFDQGPSLLLLPRFFH 68
Query: 216 --FSDKGNLNLITQALAAVGCE 235
F D G +L + + + CE
Sbjct: 69 EIFQDLGT-SLTAEGVELLKCE 89
Score = 103 (41.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 42/139 (30%), Positives = 62/139 (44%)
Query: 400 GSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE 457
G E V + ++Q GKA GV LSDG + +ISNA T+ LL PK
Sbjct: 243 GVEYRLSTGVKSISIDQATGKANGVVLSDGTHLPSDIVISNADLVYTYNNLL-----PKT 297
Query: 458 EENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIF-------- 509
L + S SI A + P+ + H+ L D++ +E + SIF
Sbjct: 298 SYA-DSLSKRETSCSSISFYWSASKIVPELNAHNIFLADEY---QESFDSIFKEHLIPSE 353
Query: 510 ----LSIPTVLDSSLAPEG 524
+++P+ +D S APEG
Sbjct: 354 PSFYVNVPSRIDPSAAPEG 372
>TAIR|locus:505006683 [details] [associations]
symbol:AT5G49555 species:3702 "Arabidopsis thaliana"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR006076 Pfam:PF01266 InterPro:IPR016040 GO:GO:0005739
EMBL:CP002688 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0005507 IPI:IPI00529479 UniGene:At.29779 OMA:HRPMIEL
RefSeq:NP_568712.1 UniGene:At.28390 ProteinModelPortal:F4K658
SMR:F4K658 PRIDE:F4K658 EnsemblPlants:AT5G49555.1 GeneID:835017
KEGG:ath:AT5G49555 Uniprot:F4K658
Length = 556
Score = 99 (39.9 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 391 SLAKGLADKGSEILYKANVTKVILEQGKAV-GVRLSDGREFYAKTIISNATRWDTFGKLL 449
++A + G+EI A V++++ E V GV L+DG + I+SNAT + T+ +L+
Sbjct: 269 AIANAAKEAGAEIFTNAEVSEILTEDSSIVKGVLLADGTRVESSAILSNATPYRTYVELV 328
Query: 450 KGEQLPKEEENF 461
LP ENF
Sbjct: 329 PTNVLP---ENF 337
Score = 83 (34.3 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196
+DA+VIG G GL AA LA G V VLE+ + GG++
Sbjct: 14 WDAVVIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAA 52
Score = 75 (31.5 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 471 FLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHI 530
F +IH+G AE + D H D N L I ++IP+ LD++++P G H++++
Sbjct: 378 FGTIHIG--AESM----DEVHSACHDSENGLPSRRPVIEMTIPSTLDNTISPPGKHVINL 431
Query: 531 F 531
F
Sbjct: 432 F 432
>RGD|1303232 [details] [associations]
symbol:Pyroxd2 "pyridine nucleotide-disulphide oxidoreductase
domain 2" species:10116 "Rattus norvegicus" [GO:0016491
"oxidoreductase activity" evidence=IEA] RGD:1303232 GO:GO:0016491
eggNOG:COG1233 CTD:84795 HOGENOM:HOG000238954 OrthoDB:EOG4WM4TG
OMA:HRPMIEL EMBL:BC079368 IPI:IPI00470325 RefSeq:NP_001004261.1
UniGene:Rn.102445 ProteinModelPortal:Q68FT3 STRING:Q68FT3
PRIDE:Q68FT3 Ensembl:ENSRNOT00000021257 GeneID:309381
KEGG:rno:309381 UCSC:RGD:1303232 GeneTree:ENSGT00390000011684
InParanoid:Q68FT3 NextBio:660678 Genevestigator:Q68FT3
GermOnline:ENSRNOG00000015807 Uniprot:Q68FT3
Length = 581
Score = 101 (40.6 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 486 DTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQK 545
DT H ED L I L IP+ LD +LAP G H++ +FT + G
Sbjct: 412 DTLLLHQAFEDAKGGLPSQRPMIELCIPSSLDPTLAPTGCHVVSLFTQYTPYTLAGGKVW 471
Query: 546 DYDAKKELVADEIINRLENKLFPGLKQSIAFREV 579
D + KK AD++ + +E PG K+S+ R++
Sbjct: 472 D-EQKKNTYADKVFDCIE-AYAPGFKRSVLGRDI 503
Score = 85 (35.0 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVM 213
+YDA+VIG+G GLVAA L G V E+ + GG++ E G+ F S ++
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLL 91
Score = 71 (30.1 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 391 SLAKGLADKGSEILYKANVTKV-ILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
++A G+ I + V KV + +G+ GV L G E ++ ++S A+ TF +L
Sbjct: 293 AIASSATAHGASIFTEKTVAKVQVNSEGRVQGVVLQGGEEVRSRVVLSCASPQVTFLELT 352
Query: 450 KGEQLP 455
E LP
Sbjct: 353 PQEWLP 358
>UNIPROTKB|O07794 [details] [associations]
symbol:Rv3829c "PROBABLE DEHYDROGENASE" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005829 "cytosol"
evidence=IDA] GO:GO:0005829 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0016491 EMBL:BX842584 EMBL:CP003248
PIR:A70523 RefSeq:NP_218346.1 RefSeq:NP_338490.1
RefSeq:YP_006517326.1 SMR:O07794 EnsemblBacteria:EBMYCT00000003016
EnsemblBacteria:EBMYCT00000072616 GeneID:13317453 GeneID:886157
GeneID:926325 KEGG:mtc:MT3937 KEGG:mtu:Rv3829c KEGG:mtv:RVBD_3829c
PATRIC:18130415 TubercuList:Rv3829c HOGENOM:HOG000049383
OMA:VNGMAGL ProtClustDB:CLSK792743 Uniprot:O07794
Length = 536
Score = 125 (49.1 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 39/108 (36%), Positives = 49/108 (45%)
Query: 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGF 216
YDAIVIG+G GL AA L G R L+ GG + E DGY F++ SV F
Sbjct: 4 YDAIVIGAGHNGLTAAVLLQRAGLRTACLDAKRYAGGMASTVELFDGYRFEIAGSVQFPT 63
Query: 217 SDKGNLNLITQALAAVGCE-MEV----IPDPTTVHFHLPNDLSVRVHR 259
S + L +L V E M V + D V F P + +HR
Sbjct: 64 SSAVSSELGLDSLPTVDLEVMSVALRGVGDDPVVQFTDPTKMLTHLHR 111
Score = 62 (26.9 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 507 SIFLSIPTVLDSSLAPEGHHILHIFTIC-SIEDWEGLAQKDYDAKKELVADEIINRLENK 565
++ L IP++ D SLAP G F + IE G Y K + +I+++ +
Sbjct: 379 TVVLQIPSLHDPSLAPAGKQAASAFAMWFPIEG--GSKYGGYGRAKVEMGQNVIDKI-TR 435
Query: 566 LFPGLKQSI 574
L P K SI
Sbjct: 436 LAPNFKGSI 444
Score = 61 (26.5 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 24/110 (21%), Positives = 52/110 (47%)
Query: 392 LAKGLADKGSEILYKANVTKVILEQGKAV----GVRLSDGREFYAKTIISNATRWDTFGK 447
L++ L G E+ ++ VT+++++ ++ GVR + G + ++S T +
Sbjct: 241 LSQLLERTGGEVRLRSKVTEIVVDNSRSSARVRGVRTAAGDTLTSPIVVSAIAPDVTINE 300
Query: 448 LLKGEQLPKE-EENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLED 496
L+ LP E + + ++ + S+L +H + A+ PP + L D
Sbjct: 301 LIDPAVLPSEIRDRYLRIDHRG-SYLQMHFAL-AQ--PPAFAAPYQALND 346
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 452 EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDW--NRLEEPYGSIF 509
+++ + NF+ ++ +F HMGV P CH + D NR P G I
Sbjct: 431 DKITRLAPNFKGSILRYTTFTPKHMGVMFGA-PGGDYCHALLHSDQIGPNR-PGPKGFIG 488
Query: 510 LSIPTVLDSSLAPEGHH 526
IP + L G H
Sbjct: 489 QPIP-IAGLYLGSAGCH 504
>UNIPROTKB|Q67GI0 [details] [associations]
symbol:carB "Phytoene dehydrogenase" species:4850
"Blakeslea trispora" [GO:0016120 "carotene biosynthetic process"
evidence=IDA] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IDA] InterPro:IPR002937 InterPro:IPR014105 Pfam:PF01593
InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
TIGRFAMs:TIGR02734 PROSITE:PS00982 GO:GO:0016120 EMBL:AY176663
GO:GO:0016166 ProteinModelPortal:Q67GI0 Uniprot:Q67GI0
Length = 582
Score = 116 (45.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 161 IVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSV 212
+VIG+GIGG A +LA +G RV V+EK GG + DG+ FD G S+
Sbjct: 9 VVIGAGIGGTATAARLAREGFRVTVVEKNDFSGGRCSFIHHDGHRFDQGPSL 60
Score = 86 (35.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 42/188 (22%), Positives = 84/188 (44%)
Query: 394 KGLADK--GSEILYKANVTKV-ILEQGKAV-GVRLSDGREFYAKTIISNATRWDTFGKLL 449
+ +A K G+E Y++ V K+ +++ K V GV L G A ++ NA + LL
Sbjct: 235 ESIASKKYGAEFRYQSPVAKINTVDKDKRVTGVTLESGEVIEADAVVCNADLVYAYHHLL 294
Query: 450 KGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVL----EDDWNRLEEPY 505
K+ +KL S +S + + +V P D H+ L ++ ++ + +
Sbjct: 295 PPCNWTKKTLASKKL---TSSSISFYWSMSTKV--PQLDVHNIFLAEAYKESFDEIFNDF 349
Query: 506 G-----SIFLSIPTVLDSSLAPEGHH-ILHIFTICSIEDWEG-LAQKDYDAKKELVADEI 558
G S ++++P+ +D S AP I+ + I ++ G A+++Y +
Sbjct: 350 GLPSEASFYVNVPSRIDESAAPPNKDSIIVLVPIGHMKSKTGNSAEENYPELVNRARKMV 409
Query: 559 INRLENKL 566
+ +E +L
Sbjct: 410 LEVIERRL 417
>UNIPROTKB|Q02861 [details] [associations]
symbol:carC "All-trans-zeta-carotene desaturase" species:34
"Myxococcus xanthus" [GO:0016117 "carotenoid biosynthetic process"
evidence=IDA] [GO:0016627 "oxidoreductase activity, acting on the
CH-CH group of donors" evidence=IDA] [GO:0055114
"oxidation-reduction process" evidence=IDA] UniPathway:UPA00803
InterPro:IPR006076 InterPro:IPR014105 Pfam:PF01266
InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
GO:GO:0016627 EMBL:M94727 PIR:S35306 ProteinModelPortal:Q02861
BioCyc:MetaCyc:MONOMER-16371 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 Uniprot:Q02861
Length = 529
Score = 104 (41.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 45/127 (35%), Positives = 61/127 (48%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGS-SGY-YERDG-YTFDV 208
S G IV+G+G GGL AA LA +G RV V+EK +PGG G G Y D
Sbjct: 3 SEGGSVRHVIVVGAGPGGLSAAINLAGQGFRVTVVEKDAVPGGRMKGLTLGASGEYAVDT 62
Query: 209 GSSVMFGFSDKGNLNLI-TQALAAVGCEMEVIP-DPTT-VHFHLPNDLSVRVHREYSDFV 265
G S++ G L I +A + ++++P D T VHF L H + +
Sbjct: 63 GPSIL---QLPGVLEQIFRRAARRLEDYVKLLPLDVNTRVHFWDGTHLDTTRHLDRME-- 117
Query: 266 AELTSKF 272
AEL +KF
Sbjct: 118 AEL-AKF 123
Score = 72 (30.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/161 (24%), Positives = 67/161 (41%)
Query: 390 KSLAKGLA----DKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTF 445
+ L++G+ D G+ V KV ++ G+AVGV+L G A ++ NA
Sbjct: 232 RELSRGMMRCARDLGATFRMGTPVEKVRVDAGRAVGVKLVGGEVLDADAVVVNADLAYAA 291
Query: 446 GKLLKGEQLPKE---EENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFV--------- 493
L+ E + ++ +F++ + G+ + + D HH +
Sbjct: 292 RSLIPAEAREGSRLTDAALERAKYSCSTFMAYY-GL--DTVYADLP-HHLIYLSESARRT 347
Query: 494 ----LEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHI 530
LED LE+P ++ P V D S AP GH L++
Sbjct: 348 DRDALEDRHVDLEDP--PFYVCNPGVTDPSGAPAGHSTLYV 386
>UNIPROTKB|E1BDK9 [details] [associations]
symbol:RETSAT "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051786 "all-trans-retinol 13,14-reductase activity"
evidence=IEA] [GO:0042572 "retinol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005640 "nuclear outer membrane" evidence=IEA]
InterPro:IPR003042 PRINTS:PR00420 GO:GO:0005789 GO:GO:0042572
GO:GO:0005640 CTD:54884 GeneTree:ENSGT00390000017613 KO:K09516
GO:GO:0051786 OMA:PSHTTFS EMBL:DAAA02031141 IPI:IPI00709034
RefSeq:NP_001095749.2 UniGene:Bt.104642 ProteinModelPortal:E1BDK9
Ensembl:ENSBTAT00000029241 GeneID:614455 KEGG:bta:614455
NextBio:20899117 ArrayExpress:E1BDK9 Uniprot:E1BDK9
Length = 609
Score = 130 (50.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
+SR D +VIGSG GGL AA LA G RVLVLE++ GG + ++G FD G
Sbjct: 60 VSRVPKKLDVVVIGSGFGGLAAAAILAKTGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGI 119
Query: 211 SVMFGFSDKGNLN-LITQALAAVGCEMEVIPDPTTVH-FHLPNDLS-VRVHREYSDFVAE 267
+ G +G+ + I + + + P + P+ ++ ++
Sbjct: 120 HYI-GRMQEGSFDRFILDQITEGQLDWAALSSPFDIMVLEGPDGRKEFPMYTGMKAYIQG 178
Query: 268 LTSKFPHEKEGVLAFYGECWKIFN--ALNSLELKSLEEPI 305
L KFP E E + Y + K+ + + ++ LK L P+
Sbjct: 179 LKDKFPQE-EAAIDKYMKLVKVVSRGGIYAVLLKILPLPV 217
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 579 553 0.00097 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 612 (65 KB)
Total size of DFA: 313 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.71u 0.13s 43.84t Elapsed: 00:00:02
Total cpu time: 43.72u 0.13s 43.85t Elapsed: 00:00:02
Start: Mon May 20 23:40:35 2013 End: Mon May 20 23:40:37 2013